Psyllid ID: psy11428

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Protein Sequence
VATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD
Secondary Structure (PSIPRED)
cccccHHHHHHHHHHHHHHHccccccEEEEEEEEEEccEEEEEEEcccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEcccHHHHHHHHHHcccccccEEccccccccEEccccccccccccccccEEEEEccccccccc
Secondary Structure Prediction (SSPRO)
cccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEccccEEEEEEEcccccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHEHHHHHHHHEEEEEEcccccHHcEEcccccHHHEEEcccccccccccccccEEEEcccccccccc
Coil and Loop (DISEMBL)
vatqskssIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCnggdlarivhrdlkpqnillshsfgkqypqpqhikLKIADFGFARFLQD
Flexible Loop (DISEMBL)
vatqskssivltRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD
Low Complexity Region (SEG)
VATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD
Disordered region (IsUnstruct)
********IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL**
Disordered Region (DISOPRED)
***********TRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ*
Disordered Region (DISEMBL)
VATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD
Disordered Region (DISPRO)
VATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
VATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	160	2.2.26 [Sep-21-2011]
Q23023	856	Serine/threonine-protein	yes	N/A	0.768	0.143	0.493	2e-31
Q9QY01	1037	Serine/threonine-protein	yes	N/A	0.75	0.115	0.470	7e-29
Q8IYT8	1036	Serine/threonine-protein	yes	N/A	0.75	0.115	0.470	7e-29
O75385	1050	Serine/threonine-protein	no	N/A	0.75	0.114	0.477	8e-29
O70405	1051	Serine/threonine-protein	no	N/A	0.75	0.114	0.470	1e-28
Q5ZJH6	468	Serine/threonine-protein	no	N/A	0.618	0.211	0.357	2e-14
Q4P0K0	990	Serine/threonine-protein	N/A	N/A	0.787	0.127	0.342	9e-14
Q9TW45	1192	Serine/threonine-protein	no	N/A	0.606	0.081	0.328	1e-13
A8WYE4	1088	Serine/threonine-protein	N/A	N/A	0.606	0.089	0.328	1e-13
Q6C7U0	710	Serine/threonine-protein	yes	N/A	0.9	0.202	0.348	2e-13

>sp|Q23023|UNC51_CAEEL Serine/threonine-protein kinase unc-51 OS=Caenorhabditis elegans GN=unc-51 PE=1 SV=1

 Score =  134 bits (337), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 78/158 (49%), Positives = 91/158 (57%), Gaps = 35/158 (22%)

Query: 5   SKSSIVLTRHI--LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           SKS  +LT+ I  LKEL+ L HEN+V LL C E+  HVYLVMEFCNGGDLADYL  K TL
Sbjct: 47  SKSKNLLTKEIKILKELSSLKHENLVGLLKCTETPTHVYLVMEFCNGGDLADYLQQKTTL 106

Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
           +EDTI+ F+ QI  AL+A   K                                  IVHR
Sbjct: 107 NEDTIQHFVVQIAHALEAINKKG---------------------------------IVHR 133

Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           DLKPQNILL ++   Q P    I +K+ADFGFARFL D
Sbjct: 134 DLKPQNILLCNNSRTQNPHFTDIVIKLADFGFARFLND 171

Protein kinase important for axonal elongation and axonal guidance. Functions in the CAN axons to direct both anterior and posterior migrations. Phosphorylates both unc-14 and vab-8.
Caenorhabditis elegans (taxid: 6239)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9QY01|ULK2_MOUSE Serine/threonine-protein kinase ULK2 OS=Mus musculus GN=Ulk2 PE=1 SV=1

 Score =  126 bits (316), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 73/155 (47%), Positives = 92/155 (59%), Gaps = 35/155 (22%)

Query: 5   SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
           SKS I+L + I K L EL HEN+V L   +E    V+LVME+CNGGDLADYL +KGTLSE
Sbjct: 47  SKSQILLGKEI-KILKELQHENIVALYDVQELPNSVFLVMEYCNGGDLADYLQAKGTLSE 105

Query: 65  DTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDL 124
           DTIR+FL QI  A++              +LH K                    I+HRDL
Sbjct: 106 DTIRVFLHQIAAAMR--------------ILHSKG-------------------IIHRDL 132

Query: 125 KPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           KPQNILLS++  ++      I++KIADFGFAR+L 
Sbjct: 133 KPQNILLSYA-NRRKSNVSGIRIKIADFGFARYLH 166

Serine/threonine-protein kinase involved in autophagy in response to starvation. Acts upstream of phosphatidylinositol 3-kinase PIK3C3 to regulate the formation of autophagophores, the precursors of autophagosomes. Part of regulatory feedback loops in autophagy: acts both as a downstream effector and negative regulator of mammalian target of rapamycin complex 1 (mTORC1) via interaction with RPTOR. Activated via phosphorylation by AMPK and also acts as a regulator of AMPK by mediating phosphorylation of AMPK subunits PRKAA1, PRKAB2 and PRKAG1, leading to negatively regulate AMPK activity. May phosphorylate ATG13/KIAA0652, FRS2, FRS3 and RPTOR; however such data need additional evidences. Not involved in ammonia-induced autophagy or in autophagic response of cerebellar granule neurons (CGN) to low potassium concentration. Plays a role early in neuronal differentiation and is required for granule cell axon formation: may govern axon formation via Ras-like GTPase signaling and through regulation of the Rab5-mediated endocytic pathways within developing axons.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q8IYT8|ULK2_HUMAN Serine/threonine-protein kinase ULK2 OS=Homo sapiens GN=ULK2 PE=1 SV=3

 Score =  126 bits (316), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 73/155 (47%), Positives = 92/155 (59%), Gaps = 35/155 (22%)

Query: 5   SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
           SKS I+L + I K L EL HEN+V L   +E    V+LVME+CNGGDLADYL +KGTLSE
Sbjct: 47  SKSQILLGKEI-KILKELQHENIVALYDVQELPNSVFLVMEYCNGGDLADYLQAKGTLSE 105

Query: 65  DTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDL 124
           DTIR+FL QI  A++              +LH K                    I+HRDL
Sbjct: 106 DTIRVFLHQIAAAMR--------------ILHSKG-------------------IIHRDL 132

Query: 125 KPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           KPQNILLS++  ++      I++KIADFGFAR+L 
Sbjct: 133 KPQNILLSYA-NRRKSSVSGIRIKIADFGFARYLH 166

Serine/threonine-protein kinase involved in autophagy in response to starvation. Acts upstream of phosphatidylinositol 3-kinase PIK3C3 to regulate the formation of autophagophores, the precursors of autophagosomes. Part of regulatory feedback loops in autophagy: acts both as a downstream effector and negative regulator of mammalian target of rapamycin complex 1 (mTORC1) via interaction with RPTOR. Activated via phosphorylation by AMPK and also acts as a regulator of AMPK by mediating phosphorylation of AMPK subunits PRKAA1, PRKAB2 and PRKAG1, leading to negatively regulate AMPK activity. May phosphorylate ATG13/KIAA0652, FRS2, FRS3 and RPTOR; however such data need additional evidences. Not involved in ammonia-induced autophagy or in autophagic response of cerebellar granule neurons (CGN) to low potassium concentration. Plays a role early in neuronal differentiation and is required for granule cell axon formation: may govern axon formation via Ras-like GTPase signaling and through regulation of the Rab5-mediated endocytic pathways within developing axons.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O75385|ULK1_HUMAN Serine/threonine-protein kinase ULK1 OS=Homo sapiens GN=ULK1 PE=1 SV=2

 Score =  125 bits (315), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 74/155 (47%), Positives = 92/155 (59%), Gaps = 35/155 (22%)

Query: 5   SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
           +KS  +L + I K L EL HEN+V L   +E    VYLVME+CNGGDLADYL +  TLSE
Sbjct: 54  AKSQTLLGKEI-KILKELKHENIVALYDFQEMANSVYLVMEYCNGGDLADYLHAMRTLSE 112

Query: 65  DTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDL 124
           DTIR+FL+QI  A++              LLH K                    I+HRDL
Sbjct: 113 DTIRLFLQQIAGAMR--------------LLHSKG-------------------IIHRDL 139

Query: 125 KPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           KPQNILLS+  G++   P  I++KIADFGFAR+LQ
Sbjct: 140 KPQNILLSNPAGRR-ANPNSIRVKIADFGFARYLQ 173

Serine/threonine-protein kinase involved in autophagy in response to starvation. Acts upstream of phosphatidylinositol 3-kinase PIK3C3 to regulate the formation of autophagophores, the precursors of autophagosomes. Part of regulatory feedback loops in autophagy: acts both as a downstream effector and negative regulator of mammalian target of rapamycin complex 1 (mTORC1) via interaction with RPTOR. Activated via phosphorylation by AMPK and also acts as a regulator of AMPK by mediating phosphorylation of AMPK subunits PRKAA1, PRKAB2 and PRKAG1, leading to negatively regulate AMPK activity. May phosphorylate ATG13/KIAA0652 and RPTOR; however such data need additional evidences. Plays a role early in neuronal differentiation and is required for granule cell axon formation.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O70405|ULK1_MOUSE Serine/threonine-protein kinase ULK1 OS=Mus musculus GN=Ulk1 PE=1 SV=1

 Score =  125 bits (314), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 73/155 (47%), Positives = 93/155 (60%), Gaps = 35/155 (22%)

Query: 5   SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
           +KS  +L + I K L EL HEN+V L   +E    VYLVME+CNGGDLADYL +  TLSE
Sbjct: 54  AKSQTLLGKEI-KILKELKHENIVALYDFQEMANSVYLVMEYCNGGDLADYLHTMRTLSE 112

Query: 65  DTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDL 124
           DT+R+FL+QI  A++              LLH K                    I+HRDL
Sbjct: 113 DTVRLFLQQIAGAMR--------------LLHSKG-------------------IIHRDL 139

Query: 125 KPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           KPQNILLS+  G++   P +I++KIADFGFAR+LQ
Sbjct: 140 KPQNILLSNPGGRR-ANPSNIRVKIADFGFARYLQ 173

Serine/threonine-protein kinase involved in autophagy in response to starvation. Acts upstream of phosphatidylinositol 3-kinase PIK3C3 to regulate the formation of autophagophores, the precursors of autophagosomes. Part of regulatory feedback loops in autophagy: acts both as a downstream effector and negative regulator of mammalian target of rapamycin complex 1 (mTORC1) via interaction with RPTOR. Activated via phosphorylation by AMPK and also acts as a regulator of AMPK by mediating phosphorylation of AMPK subunits PRKAA1, PRKAB2 and PRKAG1, leading to negatively regulate AMPK activity. May phosphorylate ATG13/KIAA0652 and RPTOR; however such data need additional evidences. Plays a role early in neuronal differentiation and is required for granule cell axon formation.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5ZJH6|ULK3_CHICK Serine/threonine-protein kinase ULK3 OS=Gallus gallus GN=ULK3 PE=2 SV=1

 Score = 78.6 bits (192), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 41/140 (29%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L  + H ++VEL   +    H+YL+MEFC GGDL+ ++  +  L E   RIFL+Q+  AL
Sbjct: 66  LKTIRHPHIVELKDFQWDSDHIYLIMEFCAGGDLSRFIRMRRILPEKVARIFLQQLACAL 125

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           K      LH  N                            I H DLKPQNILLS      
Sbjct: 126 KF-----LHDHN----------------------------ISHLDLKPQNILLS------ 146

Query: 139 YPQPQHIKLKIADFGFARFL 158
              P++ +LK+ADFGFA+++
Sbjct: 147 --TPENPQLKLADFGFAQYM 164

Serine/threonine protein kinase that acts as a regulator of Sonic hedgehog (SHH) signaling and autophagy.

Gallus gallus (taxid: 9031)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q4P0K0|ATG1_USTMA Serine/threonine-protein kinase ATG1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=ATG1 PE=3 SV=1

 Score = 75.9 bits (185), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 52/152 (34%), Positives = 75/152 (49%), Gaps = 26/152 (17%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L  +HH N+VEL  C +++  +YLVM FC  GDLA Y+  +  + E   R  + +     
Sbjct: 66  LKAIHHPNIVELKECLKTEHQIYLVMAFCASGDLAQYIKKRFDIYE---RAGMAEPDSLT 122

Query: 79  KAFQVKELH------HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           K F+    H      +E +V  +  +     +   +EF    D   IVHRD+KPQN+LL 
Sbjct: 123 KGFKPTYPHPVDGGLNETIVRSILTQ-----LAAALEFMRARD---IVHRDIKPQNLLLQ 174

Query: 133 H------SFGKQYPQPQHIKLKIADFGFARFL 158
                  + G     PQ   +K+ADFGFAR L
Sbjct: 175 PPDAAFLALGNPREIPQ---MKVADFGFARHL 203

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9TW45|PAR1_CAEEL Serine/threonine-protein kinase par-1 OS=Caenorhabditis elegans GN=par-1 PE=1 SV=1

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 43/140 (30%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           +K + +L H N+V+L    E++Q +YLV+E+ +GG++ DYLV+ G + E   R   +QIV
Sbjct: 218 VKIMKQLDHPNIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 277

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
            A     V+ LH +N                            I+HRDLK +N+LL    
Sbjct: 278 SA-----VQYLHSKN----------------------------IIHRDLKAENLLLD--- 301

Query: 136 GKQYPQPQHIKLKIADFGFA 155
                  Q + +KIADFGF+
Sbjct: 302 -------QDMNIKIADFGFS 314

Required for cytoplasmic partitioning and asymmetric cell division in early embryogenesis. Phosphorylates and restricts the asymmetry effector mex-5 (and possibly also mex-6) to the anterior cytoplasm of the zygote. Critical role in postembryonic vulval morphogenesis.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A8WYE4|PAR1_CAEBR Serine/threonine-protein kinase par-1 OS=Caenorhabditis briggsae GN=par-1 PE=3 SV=1

 Score = 75.5 bits (184), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 43/140 (30%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           +K + +L H N+V+L    E++Q +YLV+E+ +GG++ DYLV+ G + E   R   +QIV
Sbjct: 176 VKIMKQLDHPNIVKLYQVMETEQTLYLVLEYASGGEVFDYLVAHGRMKEKEARAKFRQIV 235

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
            A     V+ LH +N                            I+HRDLK +N+LL    
Sbjct: 236 SA-----VQYLHSKN----------------------------IIHRDLKAENLLLD--- 259

Query: 136 GKQYPQPQHIKLKIADFGFA 155
                  Q + +KIADFGF+
Sbjct: 260 -------QDMNIKIADFGFS 272

Required for cytoplasmic partitioning and asymmetric cell division in early embryogenesis. Phosphorylates and restricts the asymmetry effector mex-5 (and possibly also mex-6) to the anterior cytoplasm of the zygote. Critical role in postembryonic vulval morphogenesis.

Caenorhabditis briggsae (taxid: 6238)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6C7U0|ATG1_YARLI Serine/threonine-protein kinase ATG1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATG1 PE=3 SV=1

 Score = 74.7 bits (182), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 61/175 (34%), Positives = 87/175 (49%), Gaps = 31/175 (17%)

Query: 1   VATQSKSSIVLTRHILKEL-------TELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 53
           VA +S     L R +L+ L        ++ H +VVELL  +E+  H +LVME+C+ GDL+
Sbjct: 33  VAIKSVLRAKLNRKLLENLGSEISILKQMKHPHVVELLDFQETPTHFHLVMEYCSLGDLS 92

Query: 54  DYLVSKGTLSEDTIRIFLKQIVQALKAF--QVKELHHENVVELLHCKESDQHVYLVMEFC 111
            +L  K  LSE      L  +   L+ +    + LH E V   +H       +   +EF 
Sbjct: 93  FFLKKKKELSET-----LPLVASLLRRYPSNTRGLHEELVRHFVH------QLSAALEFL 141

Query: 112 NGGDLARIVHRDLKPQNILL-SHSFGKQYPQPQHIK-------LKIADFGFARFL 158
              +L   VHRD+KPQN+LL   S  +   Q  ++        LKIADFGFAR L
Sbjct: 142 RQKNL---VHRDIKPQNLLLCPPSLSEMDAQNANLYGRWELPILKIADFGFARIL 193

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
345480210	772	PREDICTED: serine/threonine-protein kina	0.706	0.146	0.616	2e-41
156544369	765	PREDICTED: serine/threonine-protein kina	0.706	0.147	0.616	2e-41
66560999	752	PREDICTED: serine/threonine-protein kina	0.706	0.150	0.609	7e-41
380030403	752	PREDICTED: serine/threonine-protein kina	0.706	0.150	0.609	7e-41
350398945	753	PREDICTED: serine/threonine-protein kina	0.706	0.150	0.609	7e-41
340712126	753	PREDICTED: serine/threonine-protein kina	0.706	0.150	0.609	7e-41
383857154	753	PREDICTED: serine/threonine-protein kina	0.706	0.150	0.602	7e-41
307167195	787	Serine/threonine-protein kinase ULK2 [Ca	0.781	0.158	0.55	2e-38
332027270	822	Serine/threonine-protein kinase ULK2 [Ac	0.781	0.152	0.55	2e-38
322800325	762	hypothetical protein SINV_01589 [Solenop	0.781	0.164	0.55	2e-38

>gi|345480210|ref|XP_003424105.1| PREDICTED: serine/threonine-protein kinase ULK2-like isoform 2 [Nasonia vitripennis]

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 90/146 (61%), Positives = 99/146 (67%), Gaps = 33/146 (22%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           ILKELTELHHENVV LL CKES+ +V+LVME+CNGGDLADYL +KGTLSEDTIR+FLKQ+
Sbjct: 59  ILKELTELHHENVVALLDCKESNHNVFLVMEYCNGGDLADYLGAKGTLSEDTIRVFLKQL 118

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
             A+KA              LH K                    +VHRDLKPQNILLSHS
Sbjct: 119 AGAMKA--------------LHAKG-------------------VVHRDLKPQNILLSHS 145

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
            GK  PQP  I LKIADFGFARFLQD
Sbjct: 146 CGKMCPQPHQITLKIADFGFARFLQD 171

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156544369|ref|XP_001607390.1| PREDICTED: serine/threonine-protein kinase ULK2-like isoform 1 [Nasonia vitripennis]

 Score =  173 bits (439), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 90/146 (61%), Positives = 99/146 (67%), Gaps = 33/146 (22%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           ILKELTELHHENVV LL CKES+ +V+LVME+CNGGDLADYL +KGTLSEDTIR+FLKQ+
Sbjct: 59  ILKELTELHHENVVALLDCKESNHNVFLVMEYCNGGDLADYLGAKGTLSEDTIRVFLKQL 118

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
             A+KA              LH K                    +VHRDLKPQNILLSHS
Sbjct: 119 AGAMKA--------------LHAKG-------------------VVHRDLKPQNILLSHS 145

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
            GK  PQP  I LKIADFGFARFLQD
Sbjct: 146 CGKMCPQPHQITLKIADFGFARFLQD 171

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66560999|ref|XP_624950.1| PREDICTED: serine/threonine-protein kinase ULK2 [Apis mellifera]

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 89/146 (60%), Positives = 99/146 (67%), Gaps = 33/146 (22%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           ILKELTELHHENVV LL CKES+ +V+LVME+CNGGDLADYL +KGTLSEDTIR+FLKQ+
Sbjct: 59  ILKELTELHHENVVALLDCKESNYNVFLVMEYCNGGDLADYLSAKGTLSEDTIRVFLKQL 118

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
             A+KA              LH K                    +VHRDLKPQNILLSH+
Sbjct: 119 AGAMKA--------------LHAKG-------------------VVHRDLKPQNILLSHN 145

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
            GK  PQP  I LKIADFGFARFLQD
Sbjct: 146 CGKACPQPHQITLKIADFGFARFLQD 171

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380030403|ref|XP_003698838.1| PREDICTED: serine/threonine-protein kinase ULK2-like [Apis florea]

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 89/146 (60%), Positives = 99/146 (67%), Gaps = 33/146 (22%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           ILKELTELHHENVV LL CKES+ +V+LVME+CNGGDLADYL +KGTLSEDTIR+FLKQ+
Sbjct: 59  ILKELTELHHENVVALLDCKESNYNVFLVMEYCNGGDLADYLSAKGTLSEDTIRVFLKQL 118

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
             A+KA              LH K                    +VHRDLKPQNILLSH+
Sbjct: 119 AGAMKA--------------LHAKG-------------------VVHRDLKPQNILLSHN 145

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
            GK  PQP  I LKIADFGFARFLQD
Sbjct: 146 CGKACPQPHQITLKIADFGFARFLQD 171

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350398945|ref|XP_003485359.1| PREDICTED: serine/threonine-protein kinase ULK2-like [Bombus impatiens]

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 89/146 (60%), Positives = 99/146 (67%), Gaps = 33/146 (22%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           ILKELTELHHENVV LL CKES+ +V+LVME+CNGGDLADYL +KGTLSEDTIR+FLKQ+
Sbjct: 59  ILKELTELHHENVVALLDCKESNYNVFLVMEYCNGGDLADYLSAKGTLSEDTIRVFLKQL 118

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
             A+KA              LH K                    +VHRDLKPQNILLSH+
Sbjct: 119 AGAMKA--------------LHAKG-------------------VVHRDLKPQNILLSHN 145

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
            GK  PQP  I LKIADFGFARFLQD
Sbjct: 146 CGKACPQPHQITLKIADFGFARFLQD 171

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340712126|ref|XP_003394615.1| PREDICTED: serine/threonine-protein kinase ULK2-like [Bombus terrestris]

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 89/146 (60%), Positives = 99/146 (67%), Gaps = 33/146 (22%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           ILKELTELHHENVV LL CKES+ +V+LVME+CNGGDLADYL +KGTLSEDTIR+FLKQ+
Sbjct: 59  ILKELTELHHENVVALLDCKESNYNVFLVMEYCNGGDLADYLSAKGTLSEDTIRVFLKQL 118

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
             A+KA              LH K                    +VHRDLKPQNILLSH+
Sbjct: 119 AGAMKA--------------LHAKG-------------------VVHRDLKPQNILLSHN 145

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
            GK  PQP  I LKIADFGFARFLQD
Sbjct: 146 CGKACPQPHQITLKIADFGFARFLQD 171

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383857154|ref|XP_003704070.1| PREDICTED: serine/threonine-protein kinase ULK2-like [Megachile rotundata]

 Score =  171 bits (434), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 88/146 (60%), Positives = 99/146 (67%), Gaps = 33/146 (22%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           ILKELTELHHENVV LL CKES+ +V+LVME+CNGGDLADYL +KGTLSEDTIR+FLKQ+
Sbjct: 59  ILKELTELHHENVVALLDCKESNHNVFLVMEYCNGGDLADYLSAKGTLSEDTIRVFLKQL 118

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
             A+KA              LH K                    ++HRDLKPQNILLSH+
Sbjct: 119 AGAMKA--------------LHAKG-------------------VIHRDLKPQNILLSHN 145

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
            GK  PQP  I LKIADFGFARFLQD
Sbjct: 146 CGKACPQPHQITLKIADFGFARFLQD 171

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307167195|gb|EFN60911.1| Serine/threonine-protein kinase ULK2 [Camponotus floridanus]

 Score =  164 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 88/160 (55%), Positives = 105/160 (65%), Gaps = 35/160 (21%)

Query: 3   TQSKSSIVLTRHI--LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG 60
           T +KS  +L + I  LK LT+LHHENVV L  CKES+ +V+LVME+CNGGDL DYL +KG
Sbjct: 45  TLAKSQDLLKKEIKILKALTKLHHENVVALYDCKESNHNVFLVMEYCNGGDLGDYLNAKG 104

Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
           TLSEDTIR+FLKQ+ +A+K              +LH K                    IV
Sbjct: 105 TLSEDTIRLFLKQLARAMK--------------VLHTKG-------------------IV 131

Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           HRDLKPQNILL+H+ GK  PQPQ I LKIADFGFARFLQ+
Sbjct: 132 HRDLKPQNILLNHNCGKACPQPQEITLKIADFGFARFLQE 171

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332027270|gb|EGI67354.1| Serine/threonine-protein kinase ULK2 [Acromyrmex echinatior]

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 88/160 (55%), Positives = 105/160 (65%), Gaps = 35/160 (21%)

Query: 3   TQSKSSIVLTRHI--LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG 60
           T +KS  +L + I  LK LT+LHHENVV L  CKES+ +V+LVME+CNGGDL DYL +KG
Sbjct: 45  TLAKSQDLLKKEIKILKALTKLHHENVVALYDCKESNHNVFLVMEYCNGGDLGDYLNAKG 104

Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
           TLSEDTIR+FLKQ+V+A+K              +LH K                    IV
Sbjct: 105 TLSEDTIRLFLKQLVRAMK--------------VLHAKG-------------------IV 131

Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           HRDLKPQNILL+H+ GK  PQP  I LKIADFGFARFLQ+
Sbjct: 132 HRDLKPQNILLNHNCGKACPQPHEITLKIADFGFARFLQE 171

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322800325|gb|EFZ21329.1| hypothetical protein SINV_01589 [Solenopsis invicta]

 Score =  163 bits (413), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 88/160 (55%), Positives = 105/160 (65%), Gaps = 35/160 (21%)

Query: 3   TQSKSSIVLTRHI--LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG 60
           T +KS  +L + I  LK LT+LHHENVV L  CKES+ +V+LVME+CNGGDL DYL +KG
Sbjct: 45  TLAKSQDLLKKEIKILKALTKLHHENVVALYDCKESNHNVFLVMEYCNGGDLGDYLNAKG 104

Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
           TLSEDTIR+FLKQ+V+A+K              +LH K                    IV
Sbjct: 105 TLSEDTIRLFLKQLVRAMK--------------VLHAKG-------------------IV 131

Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           HRDLKPQNILL+H+ GK  PQP  I LKIADFGFARFLQ+
Sbjct: 132 HRDLKPQNILLNHNCGKACPQPHEITLKIADFGFARFLQE 171

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	160
FB|FBgn0260945	855	Atg1 "Autophagy-specific gene	0.481	0.090	0.675	1.8e-36
ZFIN|ZDB-GENE-071203-2	1011	ulk1b "unc-51-like kinase 1b (	0.537	0.085	0.563	5.7e-29
UNIPROTKB|F1NZ50	1074	ULK1 "Uncharacterized protein"	0.537	0.080	0.528	2.5e-28
UNIPROTKB|F1NHE7	1040	ULK2 "Uncharacterized protein"	0.537	0.082	0.551	5.5e-28
UNIPROTKB|E1BH35	1037	ULK2 "Uncharacterized protein"	0.537	0.082	0.551	8.9e-28
UNIPROTKB|Q8IYT8	1036	ULK2 "Serine/threonine-protein	0.537	0.083	0.551	1.1e-27
UNIPROTKB|E2RF62	1037	ULK2 "Uncharacterized protein"	0.537	0.082	0.551	1.1e-27
MGI|MGI:1352758	1037	Ulk2 "unc-51 like kinase 2" [M	0.537	0.082	0.551	1.1e-27
RGD|1310181	1037	Ulk2 "Unc-51 like kinase 2 (C.	0.537	0.082	0.551	1.1e-27
UNIPROTKB|F1MFB2	1055	ULK1 "Uncharacterized protein"	0.537	0.081	0.517	2.6e-27

FB|FBgn0260945 Atg1 "Autophagy-specific gene 1" [Drosophila melanogaster (taxid:7227)]

 Score = 263 (97.6 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
 Identities = 52/77 (67%), Positives = 60/77 (77%)

Query:    15 ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
             ILKELTELHHENVV LL CKES   V LVME+CNGGDLADYL  KGTLSEDT+R+FL Q+
Sbjct:    58 ILKELTELHHENVVALLDCKESQDCVSLVMEYCNGGDLADYLSVKGTLSEDTVRLFLVQL 117

Query:    75 VQALKAFQVKELHHENV 91
               A+KA   K + H ++
Sbjct:   118 AGAMKALYTKGIVHRDL 134

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS;IMP

GO:0006468 "protein phosphorylation" evidence=NAS

GO:0004672 "protein kinase activity" evidence=ISS;IDA;IMP;NAS

GO:0016301 "kinase activity" evidence=NAS

GO:0005524 "ATP binding" evidence=IEA

GO:0016236 "macroautophagy" evidence=IMP

GO:0006914 "autophagy" evidence=IMP

GO:0019894 "kinesin binding" evidence=IMP

GO:0032007 "negative regulation of TOR signaling cascade" evidence=IMP

GO:0001558 "regulation of cell growth" evidence=IMP

GO:0008088 "axon cargo transport" evidence=IMP

GO:0050808 "synapse organization" evidence=IMP

GO:0050804 "regulation of synaptic transmission" evidence=IMP

GO:0051124 "synaptic growth at neuromuscular junction" evidence=IMP

GO:0045476 "nurse cell apoptotic process" evidence=IMP

GO:0035069 "larval midgut histolysis" evidence=IMP

GO:0046777 "protein autophosphorylation" evidence=IMP

GO:0010506 "regulation of autophagy" evidence=IMP

ZFIN|ZDB-GENE-071203-2 ulk1b "unc-51-like kinase 1b (C. elegans)" [Danio rerio (taxid:7955)]

 Score = 235 (87.8 bits), Expect = 5.7e-29, Sum P(2) = 5.7e-29
 Identities = 49/87 (56%), Positives = 63/87 (72%)

Query:     5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
             +KS  +L + I K L EL HEN+V L   +E+   VYLVME+CNGGDLADYL SKGTLSE
Sbjct:    47 AKSQTLLGKEI-KILKELKHENIVALHDFQETASSVYLVMEYCNGGDLADYLHSKGTLSE 105

Query:    65 DTIRIFLKQIVQALKAFQVKELHHENV 91
             DTIR+FL+QI  A++  Q K + H ++
Sbjct:   106 DTIRVFLQQITGAMRVLQAKGIIHRDL 132

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

UNIPROTKB|F1NZ50 ULK1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 211 (79.3 bits), Expect = 2.5e-28, Sum P(2) = 2.5e-28
 Identities = 46/87 (52%), Positives = 59/87 (67%)

Query:     5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
             +KS  +L + I K L EL HEN+V L   +E    VYLVME+CNGGDLADYL +  TLSE
Sbjct:    71 AKSQTLLGKEI-KILKELKHENIVALYDFQEVANSVYLVMEYCNGGDLADYLHTMRTLSE 129

Query:    65 DTIRIFLKQIVQALKAFQVKELHHENV 91
             DTIR+FL+QI  A+K    K + H ++
Sbjct:   130 DTIRLFLQQIAGAMKMLHSKGIIHRDL 156

GO:0005524 "ATP binding" evidence=IEA

GO:0000045 "autophagic vacuole assembly" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005776 "autophagic vacuole" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0007265 "Ras protein signal transduction" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0016239 "positive regulation of macroautophagy" evidence=IEA

GO:0017137 "Rab GTPase binding" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0021707 "cerebellar granule cell differentiation" evidence=IEA

GO:0021933 "radial glia guided migration of cerebellar granule cell" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0031623 "receptor internalization" evidence=IEA

GO:0032403 "protein complex binding" evidence=IEA

GO:0034045 "pre-autophagosomal structure membrane" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0048671 "negative regulation of collateral sprouting" evidence=IEA

GO:0048675 "axon extension" evidence=IEA

GO:0051386 "regulation of neurotrophin TRK receptor signaling pathway" evidence=IEA

GO:0070969 "ULK1-ATG13-FIP200 complex" evidence=IEA

UNIPROTKB|F1NHE7 ULK2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 233 (87.1 bits), Expect = 5.5e-28, Sum P(2) = 5.5e-28
 Identities = 48/87 (55%), Positives = 62/87 (71%)

Query:     5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
             SKS I+L + I K L EL HEN+V L   +E    V+LVME+CNGGDLADYL +KGTLSE
Sbjct:    42 SKSQILLGKEI-KILKELQHENIVALYDVQEMPSSVFLVMEYCNGGDLADYLQAKGTLSE 100

Query:    65 DTIRIFLKQIVQALKAFQVKELHHENV 91
             DTIR+FL+QI  A++    K + H ++
Sbjct:   101 DTIRVFLQQIAAAMRILHSKGIIHRDL 127

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0010506 "regulation of autophagy" evidence=IEA

GO:0034045 "pre-autophagosomal structure membrane" evidence=IEA

GO:0042594 "response to starvation" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0048671 "negative regulation of collateral sprouting" evidence=IEA

GO:0048675 "axon extension" evidence=IEA

UNIPROTKB|E1BH35 ULK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 230 (86.0 bits), Expect = 8.9e-28, Sum P(2) = 8.9e-28
 Identities = 48/87 (55%), Positives = 61/87 (70%)

Query:     5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
             SKS I+L + I K L EL HEN+V L   +E    V+LVME+CNGGDLADYL +KGTLSE
Sbjct:    47 SKSQILLGKEI-KILKELQHENIVALYDVQELPNSVFLVMEYCNGGDLADYLQAKGTLSE 105

Query:    65 DTIRIFLKQIVQALKAFQVKELHHENV 91
             DTIR+FL QI  A++    K + H ++
Sbjct:   106 DTIRVFLHQIAAAMRILHSKGIIHRDL 132

GO:0048675 "axon extension" evidence=IEA

GO:0048671 "negative regulation of collateral sprouting" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0042594 "response to starvation" evidence=IEA

GO:0034045 "pre-autophagosomal structure membrane" evidence=IEA

GO:0010506 "regulation of autophagy" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|Q8IYT8 ULK2 "Serine/threonine-protein kinase ULK2" [Homo sapiens (taxid:9606)]

 Score = 230 (86.0 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
 Identities = 48/87 (55%), Positives = 61/87 (70%)

Query:     5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
             SKS I+L + I K L EL HEN+V L   +E    V+LVME+CNGGDLADYL +KGTLSE
Sbjct:    47 SKSQILLGKEI-KILKELQHENIVALYDVQELPNSVFLVMEYCNGGDLADYLQAKGTLSE 105

Query:    65 DTIRIFLKQIVQALKAFQVKELHHENV 91
             DTIR+FL QI  A++    K + H ++
Sbjct:   106 DTIRVFLHQIAAAMRILHSKGIIHRDL 132

GO:0007165 "signal transduction" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

GO:0048671 "negative regulation of collateral sprouting" evidence=IEA

GO:0048675 "axon extension" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0034045 "pre-autophagosomal structure membrane" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0010506 "regulation of autophagy" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0042594 "response to starvation" evidence=ISS

UNIPROTKB|E2RF62 ULK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 230 (86.0 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
 Identities = 48/87 (55%), Positives = 61/87 (70%)

Query:     5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
             SKS I+L + I K L EL HEN+V L   +E    V+LVME+CNGGDLADYL +KGTLSE
Sbjct:    47 SKSQILLGKEI-KILKELQHENIVALYDVQELPNSVFLVMEYCNGGDLADYLQAKGTLSE 105

Query:    65 DTIRIFLKQIVQALKAFQVKELHHENV 91
             DTIR+FL QI  A++    K + H ++
Sbjct:   106 DTIRVFLHQIAAAMRILHSKGIIHRDL 132

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

MGI|MGI:1352758 Ulk2 "unc-51 like kinase 2" [Mus musculus (taxid:10090)]

 Score = 230 (86.0 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
 Identities = 48/87 (55%), Positives = 61/87 (70%)

Query:     5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
             SKS I+L + I K L EL HEN+V L   +E    V+LVME+CNGGDLADYL +KGTLSE
Sbjct:    47 SKSQILLGKEI-KILKELQHENIVALYDVQELPNSVFLVMEYCNGGDLADYLQAKGTLSE 105

Query:    65 DTIRIFLKQIVQALKAFQVKELHHENV 91
             DTIR+FL QI  A++    K + H ++
Sbjct:   106 DTIRVFLHQIAAAMRILHSKGIIHRDL 132

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0007399 "nervous system development" evidence=IEA

GO:0007409 "axonogenesis" evidence=IEA

GO:0010506 "regulation of autophagy" evidence=ISO;IMP

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0031410 "cytoplasmic vesicle" evidence=IEA

GO:0034045 "pre-autophagosomal structure membrane" evidence=ISO;IDA

GO:0042594 "response to starvation" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=ISO

GO:0048671 "negative regulation of collateral sprouting" evidence=IMP

GO:0048675 "axon extension" evidence=IMP

RGD|1310181 Ulk2 "Unc-51 like kinase 2 (C. elegans)" [Rattus norvegicus (taxid:10116)]

 Score = 230 (86.0 bits), Expect = 1.1e-27, Sum P(2) = 1.1e-27
 Identities = 48/87 (55%), Positives = 61/87 (70%)

Query:     5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
             SKS I+L + I K L EL HEN+V L   +E    V+LVME+CNGGDLADYL +KGTLSE
Sbjct:    47 SKSQILLGKEI-KILKELQHENIVALYDVQELPNSVFLVMEYCNGGDLADYLQAKGTLSE 105

Query:    65 DTIRIFLKQIVQALKAFQVKELHHENV 91
             DTIR+FL QI  A++    K + H ++
Sbjct:   106 DTIRVFLHQIAAAMRILHSKGIIHRDL 132

GO:0003674 "molecular_function" evidence=ND

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISO

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0010506 "regulation of autophagy" evidence=IEA;ISO

GO:0034045 "pre-autophagosomal structure membrane" evidence=IEA;ISO

GO:0042594 "response to starvation" evidence=IEA;ISO

GO:0046777 "protein autophosphorylation" evidence=IEA;ISO

GO:0048671 "negative regulation of collateral sprouting" evidence=IEA;ISO

GO:0048675 "axon extension" evidence=IEA;ISO

UNIPROTKB|F1MFB2 ULK1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 209 (78.6 bits), Expect = 2.6e-27, Sum P(2) = 2.6e-27
 Identities = 45/87 (51%), Positives = 59/87 (67%)

Query:     5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE 64
             +KS  +L + I K L EL HEN+V L   +E    VYLVME+CNGGDLADYL +  TLSE
Sbjct:    54 AKSQTLLGKEI-KILKELKHENIVALYDFQEMANSVYLVMEYCNGGDLADYLHTMRTLSE 112

Query:    65 DTIRIFLKQIVQALKAFQVKELHHENV 91
             DTIR+FL+QI  A++    K + H ++
Sbjct:   113 DTIRLFLQQIAGAMRLLHSKGIIHRDL 139

GO:0070969 "ULK1-ATG13-FIP200 complex" evidence=IEA

GO:0051386 "regulation of neurotrophin TRK receptor signaling pathway" evidence=IEA

GO:0048675 "axon extension" evidence=IEA

GO:0048671 "negative regulation of collateral sprouting" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043005 "neuron projection" evidence=IEA

GO:0034045 "pre-autophagosomal structure membrane" evidence=IEA

GO:0032403 "protein complex binding" evidence=IEA

GO:0031623 "receptor internalization" evidence=IEA

GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA

GO:0021933 "radial glia guided migration of cerebellar granule cell" evidence=IEA

GO:0021707 "cerebellar granule cell differentiation" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0017137 "Rab GTPase binding" evidence=IEA

GO:0016239 "positive regulation of macroautophagy" evidence=IEA

GO:0008104 "protein localization" evidence=IEA

GO:0007265 "Ras protein signal transduction" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0005776 "autophagic vacuole" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0000045 "autophagic vacuole assembly" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	160
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	3e-33
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-29
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	4e-29
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	1e-24
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	7e-21
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	9e-21
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	2e-20
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	7e-20
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	8e-20
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-19
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	6e-19
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	6e-18
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	8e-18
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-17
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-17
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-16
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-16
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	2e-16
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	9e-16
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-15
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-15
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-15
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	8e-15
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	8e-15
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	1e-14
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-14
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	5e-14
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-14
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-13
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-13
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	2e-13
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	3e-13
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-13
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	5e-13
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	8e-13
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-12
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-12
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	2e-12
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	2e-12
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	3e-12
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	4e-12
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	7e-12
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	8e-12
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-11
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-11
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-11
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-11
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	6e-11
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	6e-11
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-10
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-10
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	2e-10
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	2e-10
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-10
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-10
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	3e-10
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	4e-10
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	4e-10
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	5e-10
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	5e-10
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	8e-10
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	1e-09
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-09
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	1e-09
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-09
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	2e-09
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	2e-09
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-09
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	2e-09
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	7e-09
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	8e-09
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	9e-09
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-08
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-08
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	1e-08
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-08
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	2e-08
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	2e-08
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-08
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-08
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	3e-08
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	3e-08
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	3e-08
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	3e-08
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	4e-08
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	5e-08
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	5e-08
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	7e-08
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	8e-08
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	9e-08
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	9e-08
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-07
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	1e-07
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	2e-07
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	2e-07
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	4e-07
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	4e-07
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	4e-07
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-07
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	5e-07
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	6e-07
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	6e-07
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	7e-07
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	7e-07
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	8e-07
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	9e-07
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	1e-06
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	1e-06
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-06
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	1e-06
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	2e-06
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-06
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	2e-06
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	2e-06
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	3e-06
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-06
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	3e-06
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	3e-06
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	4e-06
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	4e-06
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	4e-06
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	4e-06
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	4e-06
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	4e-06
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	5e-06
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	5e-06
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	5e-06
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	6e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	6e-06
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	6e-06
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	8e-06
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	8e-06
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	8e-06
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	9e-06
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	9e-06
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	9e-06
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-05
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	1e-05
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	1e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	1e-05
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	1e-05
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	1e-05
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	1e-05
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-05
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-05
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	2e-05
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-05
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-05
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	2e-05
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	2e-05
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-05
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-05
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	3e-05
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-05
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	4e-05
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	4e-05
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	4e-05
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-05
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-05
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	4e-05
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	5e-05
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	5e-05
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	5e-05
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	5e-05
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	6e-05
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	6e-05
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	7e-05
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	1e-04
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	1e-04
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	1e-04
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	1e-04
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	1e-04
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	1e-04
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-04
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-04
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	2e-04
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	2e-04
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	3e-04
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	3e-04
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	3e-04
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	3e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-04
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	3e-04
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	3e-04
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	3e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	4e-04
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	4e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	4e-04
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	5e-04
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	5e-04
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	5e-04
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	5e-04
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	5e-04
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	6e-04
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	6e-04
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	6e-04
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	8e-04
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	8e-04
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	8e-04
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	0.001
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	0.001
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	0.001
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	0.001
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	0.001
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	0.001
PLN03225	566	PLN03225, PLN03225, Serine/threonine-protein kinas	0.001
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	0.002
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	0.002
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	0.002
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	0.002
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	0.002
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	0.002
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	0.002
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	0.002
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	0.002
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	0.002
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	0.002
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	0.003
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	0.003
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	0.003
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	0.003
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	0.003
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	0.003
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	0.003
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	0.003
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	0.003
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	0.003
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	0.003
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	0.003
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	0.004
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	0.004
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	0.004
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	0.004
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	0.004
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  117 bits (295), Expect = 3e-33
 Identities = 56/151 (37%), Positives = 70/151 (46%), Gaps = 46/151 (30%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
             IL+E   L +L H N+V L    E +  +YLVME+C GGDL D L  +G LSED  R 
Sbjct: 42  ERILREIKILKKLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRGRLSEDEARF 101

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           +L+QI+ AL+               LH K                    IVHRDLKP+NI
Sbjct: 102 YLRQILSALEY--------------LHSK-------------------GIVHRDLKPENI 128

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LL               +K+ADFG AR L  
Sbjct: 129 LLDEDG----------HVKLADFGLARQLDP 149

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  107 bits (270), Expect = 2e-29
 Identities = 50/140 (35%), Positives = 63/140 (45%), Gaps = 43/140 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L  L H N+V L+   E   H+YLVME+C GGDL DYL   G LSED  +    QI++ L
Sbjct: 52  LRRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPLSEDEAKKIALQILRGL 111

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           +      LH                               I+HRDLKP+NILL  +    
Sbjct: 112 EY-----LHSNG----------------------------IIHRDLKPENILLDENGV-- 136

Query: 139 YPQPQHIKLKIADFGFARFL 158
                   +KIADFG A+ L
Sbjct: 137 --------VKIADFGLAKKL 148

Length = 260

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  105 bits (265), Expect = 4e-29
 Identities = 54/159 (33%), Positives = 73/159 (45%), Gaps = 46/159 (28%)

Query: 6   KSSIVLTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GT 61
           + S  L   +L+E   L +L+H N+V+L    E + H+YLVME+C GG L D L    G 
Sbjct: 29  EDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGK 88

Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
           LSED I   L QI++ L     + LH                               I+H
Sbjct: 89  LSEDEILRILLQILEGL-----EYLHSNG----------------------------IIH 115

Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDLKP+NILL    G         K+K+ADFG ++ L  
Sbjct: 116 RDLKPENILLDSDNG---------KVKLADFGLSKLLTS 145

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 95.3 bits (238), Expect = 1e-24
 Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 45/147 (30%)

Query: 16  LKELTELHHENVVELLHCKESDQ--HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
           ++ L+ L H N+V     +  ++   + + +E+ +GG L+  L   G L E  IR + +Q
Sbjct: 50  IRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQ 109

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           I++ L                LH                      IVHRD+K  NIL+  
Sbjct: 110 ILEGL--------------AYLHSN-------------------GIVHRDIKGANILVDS 136

Query: 134 SFGKQYPQPQHIKLKIADFGFARFLQD 160
                        +K+ADFG A+ L D
Sbjct: 137 DG----------VVKLADFGCAKRLGD 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 85.3 bits (212), Expect = 7e-21
 Identities = 47/158 (29%), Positives = 72/158 (45%), Gaps = 49/158 (31%)

Query: 5   SKSSIVLTR---HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS 58
            K  I+  +   H L E   L+ ++H  +V+L +  ++++ +YLV+E+  GG+L  +L  
Sbjct: 27  KKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSK 86

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
           +G  SE+  R +  +IV AL              E LH                      
Sbjct: 87  EGRFSEERARFYAAEIVLAL--------------EYLHSL-------------------G 113

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           I++RDLKP+NILL    G       HIKL   DFG A+
Sbjct: 114 IIYRDLKPENILLDAD-G-------HIKL--TDFGLAK 141

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 85.7 bits (213), Expect = 9e-21
 Identities = 50/162 (30%), Positives = 72/162 (44%), Gaps = 49/162 (30%)

Query: 5   SKSSIVLTR---HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS 58
           SK+ IV  +   H+L E   L  + H  +V L    + D ++YLVME+  GG+L  +L  
Sbjct: 35  SKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRK 94

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
            G   E   R +  Q+V AL+      LH  +                            
Sbjct: 95  SGRFPEPVARFYAAQVVLALEY-----LHSLD---------------------------- 121

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           IV+RDLKP+N+LL  S G       +I  KI DFGFA+ ++ 
Sbjct: 122 IVYRDLKPENLLLD-SDG-------YI--KITDFGFAKRVKG 153

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 84.2 bits (209), Expect = 2e-20
 Identities = 46/149 (30%), Positives = 67/149 (44%), Gaps = 46/149 (30%)

Query: 12  TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIR 68
              +L E   L++     VV+L +  +  +++YLVME+  GGDLA  L + G+L ED  R
Sbjct: 37  VDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVAR 96

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
           I++ +IV AL              E LH      +               I+HRDLKP N
Sbjct: 97  IYIAEIVLAL--------------EYLH-----SN--------------GIIHRDLKPDN 123

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARF 157
           IL+            H+KL   DFG ++ 
Sbjct: 124 ILID--------SNGHLKL--TDFGLSKV 142

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 82.9 bits (206), Expect = 7e-20
 Identities = 46/144 (31%), Positives = 65/144 (45%), Gaps = 48/144 (33%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKQ 73
           +LKEL    H N+V+LL    +++ +YLV E+C+  DL  YL    G LS + I+  + Q
Sbjct: 51  LLKEL---KHPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQ 106

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           +++ L                 H                     RI+HRDLKPQNIL++ 
Sbjct: 107 LLRGLAY--------------CHSH-------------------RILHRDLKPQNILINR 133

Query: 134 SFGKQYPQPQHIKLKIADFGFARF 157
             G          LK+ADFG AR 
Sbjct: 134 D-G---------VLKLADFGLARA 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 83.0 bits (206), Expect = 8e-20
 Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 56/165 (33%)

Query: 9   IVLTRHILKE------------LTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADY 55
           I+  R ++KE            LT L  H  +++L +  + ++++Y V+E+   G+L  Y
Sbjct: 33  ILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQY 92

Query: 56  LVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD 115
           +   G+L E   R +  +I+ AL              E LH K                 
Sbjct: 93  IRKYGSLDEKCTRFYAAEILLAL--------------EYLHSK----------------- 121

Query: 116 LARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
              I+HRDLKP+NILL               +KI DFG A+ L  
Sbjct: 122 --GIIHRDLKPENILLDKDM----------HIKITDFGTAKVLDP 154

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 80.7 bits (200), Expect = 4e-19
 Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 47/152 (30%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIR 68
             I+ E   L +  H N+V+          +++VMEFC+GG L D L  +  TL+E  I 
Sbjct: 42  EKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIA 101

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
              K++++ L+      LH                               I+HRD+K  N
Sbjct: 102 YVCKELLKGLEY-----LHSNG----------------------------IIHRDIKAAN 128

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ILL+             ++K+ DFG +  L D
Sbjct: 129 ILLTSDG----------EVKLIDFGLSAQLSD 150

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 79.8 bits (198), Expect = 6e-19
 Identities = 35/146 (23%), Positives = 58/146 (39%), Gaps = 47/146 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL----VSKGTLSEDTIRIFLKQI 74
           L +L+H N+++     E    + +VME+ +GGDL+  +           E+ I  +  Q+
Sbjct: 53  LKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQL 112

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
             AL     K LH                              +I+HRD+KPQNI L+ +
Sbjct: 113 CLAL-----KYLHSR----------------------------KILHRDIKPQNIFLTSN 139

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                       +K+ DFG ++ L  
Sbjct: 140 G----------LVKLGDFGISKVLSS 155

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 77.7 bits (192), Expect = 6e-18
 Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 51/163 (31%)

Query: 5   SKSSIVLTR---HILKE---LTELHHENVVELLHCKESDQ-HVYLVMEFCNGGDLADYLV 57
            K  IV T    HI  E   L E +H  +V+L +    D+ ++Y++ME+C GG+L   L 
Sbjct: 27  KKRHIVETGQQEHIFSEKEILEECNHPFIVKL-YRTFKDKKYIYMLMEYCLGGELWTILR 85

Query: 58  SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
            +G   E T R ++  +V A +      LH+                             
Sbjct: 86  DRGLFDEYTARFYIACVVLAFEY-----LHNRG--------------------------- 113

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            I++RDLKP+N+LL       Y       +K+ DFGFA+ L+ 
Sbjct: 114 -IIYRDLKPENLLLDS---NGY-------VKLVDFGFAKKLKS 145

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 77.2 bits (191), Expect = 8e-18
 Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 47/150 (31%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIF 70
            L+E   + +L H NVV+LL     ++ +Y+VME+  GGDL  YL  ++  LS   +  F
Sbjct: 48  FLREARIMRKLDHPNVVKLLGVCTEEEPLYIVMEYMEGGDLLSYLRKNRPKLSLSDLLSF 107

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QI + +              E L  K                     +HRDL  +N L
Sbjct: 108 ALQIARGM--------------EYLESK-------------------NFIHRDLAARNCL 134

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +  +            +KI+DFG +R L D
Sbjct: 135 VGENL----------VVKISDFGLSRDLYD 154

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 77.0 bits (190), Expect = 1e-17
 Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 45/145 (31%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKQI 74
           +K L +L HEN+V L         +YLV E+     L + L  S G L  D +R ++ Q+
Sbjct: 51  VKVLRQLRHENIVNLKEAFRRKGRLYLVFEYV-ERTLLELLEASPGGLPPDAVRSYIWQL 109

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           +QA+                               +C+  +   I+HRD+KP+NIL+S  
Sbjct: 110 LQAIA------------------------------YCHSHN---IIHRDIKPENILVSE- 135

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQ 159
                       LK+ DFGFAR L+
Sbjct: 136 ---------SGVLKLCDFGFARALR 151

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 75.7 bits (187), Expect = 3e-17
 Identities = 40/151 (26%), Positives = 60/151 (39%), Gaps = 48/151 (31%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRI 69
            L+E   + +L H N+V+LL     ++ + +VME+  GGDL DYL       LS   +  
Sbjct: 48  FLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMPGGDLLDYLRKNRPKELSLSDLLS 107

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           F  QI + +              E L  K                     +HRDL  +N 
Sbjct: 108 FALQIARGM--------------EYLESK-------------------NFIHRDLAARNC 134

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+  +            +KI+DFG +R L D
Sbjct: 135 LVGENL----------VVKISDFGLSRDLYD 155

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 73.7 bits (182), Expect = 1e-16
 Identities = 41/150 (27%), Positives = 59/150 (39%), Gaps = 39/150 (26%)

Query: 15  ILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
            LKE     +L H NVV LL     ++ +YLV+E+  GGDL DYL     +     +  L
Sbjct: 43  FLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTL 102

Query: 72  KQIVQALKAFQV-KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
                   A Q+ K + +      L  K                   + VHRDL  +N L
Sbjct: 103 SLKDLLSFAIQIAKGMEY------LASK-------------------KFVHRDLAARNCL 137

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +               +KI+DFG +R + D
Sbjct: 138 VGEDL----------VVKISDFGLSRDVYD 157

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 73.8 bits (182), Expect = 2e-16
 Identities = 47/148 (31%), Positives = 65/148 (43%), Gaps = 51/148 (34%)

Query: 16  LKELTELHHENVVELL---HCKESDQ--HVYLVMEFCNGGDLADYL--VSKGTLSEDTIR 68
           LK+L    H N+V LL   H   +D+   + LV E  +  DLA YL    K  L  +TI+
Sbjct: 52  LKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIK 110

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             ++Q+++               V+ LH                     RIVHRDLKPQN
Sbjct: 111 DLMRQLLRG--------------VDFLHSH-------------------RIVHRDLKPQN 137

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           IL++             ++KIADFG AR
Sbjct: 138 ILVTSDG----------QVKIADFGLAR 155

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 72.9 bits (180), Expect = 2e-16
 Identities = 35/145 (24%), Positives = 56/145 (38%), Gaps = 48/145 (33%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQA 77
           + +L H N+V LL      + +Y+V E+  GGDL D+L   G  L+   +     QI + 
Sbjct: 55  MKKLSHPNIVRLLGVCTQGEPLYIVTEYMPGGDLLDFLRKHGEKLTLKDLLQMALQIAKG 114

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQNILLSHSF 135
                                         ME+     L     VHRDL  +N L++ + 
Sbjct: 115 ------------------------------MEY-----LESKNFVHRDLAARNCLVTENL 139

Query: 136 GKQYPQPQHIKLKIADFGFARFLQD 160
                      +KI+DFG +R + +
Sbjct: 140 ----------VVKISDFGLSRDIYE 154

Length = 258

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 72.2 bits (178), Expect = 9e-16
 Identities = 47/162 (29%), Positives = 66/162 (40%), Gaps = 52/162 (32%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLHC-----KESDQHVYLVMEFCNGGDLADYLVS 58
             ++  + IL+E   L  L HEN++ LL        E    VY+V E     DL   + S
Sbjct: 38  DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELM-ETDLHKVIKS 96

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
              L++D I+ FL QI++ LK      LH                             A 
Sbjct: 97  PQPLTDDHIQYFLYQILRGLKY-----LHS----------------------------AN 123

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ++HRDLKP NIL++ +            LKI DFG AR +  
Sbjct: 124 VIHRDLKPSNILVNSN----------CDLKICDFGLARGVDP 155

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 71.7 bits (176), Expect = 1e-15
 Identities = 48/152 (31%), Positives = 68/152 (44%), Gaps = 46/152 (30%)

Query: 12  TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIR 68
            +H+  E   L E+ H  ++ L   +   + +Y++ME+  GG+L  YL + G  S  T  
Sbjct: 45  EQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGL 104

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
            +  +IV AL              E LH KE                   IV+RDLKP+N
Sbjct: 105 FYASEIVCAL--------------EYLHSKE-------------------IVYRDLKPEN 131

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ILL         +  HIKL   DFGFA+ L+D
Sbjct: 132 ILLD--------KEGHIKL--TDFGFAKKLRD 153

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 71.1 bits (175), Expect = 2e-15
 Identities = 43/149 (28%), Positives = 61/149 (40%), Gaps = 46/149 (30%)

Query: 19  LTELHHENVVELLH--CKESDQHVYLVMEFCNGGDLADYLVSKGT-----LSEDTIRIFL 71
           L EL H N+V         S+Q +Y+VME+C GGDLA  L+ K       + E+ I   L
Sbjct: 53  LRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQ-LIQKCKKERKYIEEEFIWRIL 111

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
            Q++ AL                 H +    +               ++HRDLKP NI L
Sbjct: 112 TQLLLALYE--------------CHNRSDPGN--------------TVLHRDLKPANIFL 143

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
             +         ++KL   DFG A+ L  
Sbjct: 144 DAN--------NNVKL--GDFGLAKILGH 162

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 71.3 bits (175), Expect = 2e-15
 Identities = 47/147 (31%), Positives = 66/147 (44%), Gaps = 46/147 (31%)

Query: 12  TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIR 68
            RH+L E   LT    E +V+LL+  + D+++YL ME+  GGD    L + G LSED  R
Sbjct: 45  VRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHAR 104

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
            ++ ++ +A     V  LH     EL                         +HRDLKP+N
Sbjct: 105 FYMAEMFEA-----VDALH-----EL-----------------------GYIHRDLKPEN 131

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFA 155
            L+  S         HIKL   DFG +
Sbjct: 132 FLIDAS--------GHIKL--TDFGLS 148

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 70.0 bits (172), Expect = 8e-15
 Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 46/145 (31%)

Query: 12  TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIR 68
             H+  E   L +     +V+L +  + ++H+YLVME+  GGDL + L+ K    E+T R
Sbjct: 45  IAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETAR 104

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
            ++ ++V A     +  +H       L                        +HRD+KP N
Sbjct: 105 FYIAELVLA-----LDSVH------KLGF----------------------IHRDIKPDN 131

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFG 153
           IL+            HIKL  ADFG
Sbjct: 132 ILIDAD--------GHIKL--ADFG 146

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 69.3 bits (170), Expect = 8e-15
 Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 46/140 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL--VSKGTLSEDTIRIFLKQIVQ 76
           L EL+H N+V LL    S+  +YLV EF +  DL  Y+       L    I+ +L Q++Q
Sbjct: 52  LKELNHPNIVRLLDVVHSENKLYLVFEFLDL-DLKKYMDSSPLTGLDPPLIKSYLYQLLQ 110

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            +                               +C+     R++HRDLKPQN+L+     
Sbjct: 111 GIA------------------------------YCHS---HRVLHRDLKPQNLLID---- 133

Query: 137 KQYPQPQHIKLKIADFGFAR 156
                 +   LK+ADFG AR
Sbjct: 134 ------REGALKLADFGLAR 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 68.8 bits (169), Expect = 1e-14
 Identities = 37/145 (25%), Positives = 60/145 (41%), Gaps = 47/145 (32%)

Query: 15  ILKELT---ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIF 70
           I+ E+    +  H N+V+          +++VME+ +GG L D +  +   ++E  I   
Sbjct: 62  IINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYV 121

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
            ++++Q L              E LH +                    ++HRD+K  NIL
Sbjct: 122 CREVLQGL--------------EYLHSQ-------------------NVIHRDIKSDNIL 148

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFA 155
           LS   G        +KL  ADFGFA
Sbjct: 149 LSKD-G-------SVKL--ADFGFA 163

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 68.0 bits (167), Expect = 2e-14
 Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 45/147 (30%)

Query: 15  ILKELTELH---HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
           +L+EL  L       VV+       +  + +V+E+ +GG LAD L   G + E  +    
Sbjct: 46  LLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIA 105

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
           +QI++ L       LH +                             I+HRD+KP N+L+
Sbjct: 106 RQILKGLDY-----LHTKR---------------------------HIIHRDIKPSNLLI 133

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFL 158
           +    K          KIADFG ++ L
Sbjct: 134 NS---KGEV-------KIADFGISKVL 150

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 67.2 bits (165), Expect = 5e-14
 Identities = 39/143 (27%), Positives = 57/143 (39%), Gaps = 45/143 (31%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQI 74
           +K L EL H N++ LL       ++ LV EF    DL   +  K   L+   I+ ++   
Sbjct: 53  IKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMT 111

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           ++ L     + LH                               I+HRDLKP N+L++ S
Sbjct: 112 LRGL-----EYLHSNW----------------------------ILHRDLKPNNLLIA-S 137

Query: 135 FGKQYPQPQHIKLKIADFGFARF 157
            G          LK+ADFG AR 
Sbjct: 138 DG---------VLKLADFGLARS 151

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 67.0 bits (164), Expect = 5e-14
 Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 45/142 (31%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQI 74
           +K L EL+H N+++LL        +YLV EF +  DL   +  +   L E  I+ +L Q+
Sbjct: 49  IKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQL 107

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           +Q L                               FC+      I+HRDLKP+N+L++  
Sbjct: 108 LQGLA------------------------------FCHS---HGILHRDLKPENLLIN-- 132

Query: 135 FGKQYPQPQHIKLKIADFGFAR 156
                       LK+ADFG AR
Sbjct: 133 --------TEGVLKLADFGLAR 146

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 66.2 bits (162), Expect = 1e-13
 Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 45/142 (31%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQI 74
           +K L    H  VV+LL          LVME+    DL++ L   +  L E  ++ +++ +
Sbjct: 50  IKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRML 108

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           ++ +         H N                            I+HRDLKP N+L+S  
Sbjct: 109 LKGVAYM------HAN---------------------------GIMHRDLKPANLLIS-- 133

Query: 135 FGKQYPQPQHIKLKIADFGFAR 156
                       LKIADFG AR
Sbjct: 134 --------ADGVLKIADFGLAR 147

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 65.6 bits (160), Expect = 2e-13
 Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 43/141 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L  L HE +V+   C   D+ + + ME+  GG + D L + G L+E   R + +QI++ +
Sbjct: 58  LKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGV 117

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                 E  H N                            IVHRD+K  NIL   S G  
Sbjct: 118 ------EYLHSN---------------------------MIVHRDIKGANILRD-SAG-- 141

Query: 139 YPQPQHIKLKIADFGFARFLQ 159
                   +K+ DFG ++ LQ
Sbjct: 142 -------NVKLGDFGASKRLQ 155

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 65.9 bits (159), Expect = 2e-13
 Identities = 50/167 (29%), Positives = 69/167 (41%), Gaps = 49/167 (29%)

Query: 1   VATQSKSSIVLTRHILKELTEL----HHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           +A + +S        L+E+  L    H  N+V+L    + +  +YLVME+ +GG L D L
Sbjct: 30  LAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLL 89

Query: 57  ---VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNG 113
                KG LSE      L QI+ AL              E LH K               
Sbjct: 90  KKIGRKGPLSESEALFILAQILSAL--------------EYLHSK--------------- 120

Query: 114 GDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
                I+HRD+KP+NILL               +K+ DFG A+ L D
Sbjct: 121 ----GIIHRDIKPENILLDRDGR---------VVKLIDFGLAKLLPD 154

Length = 384

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 65.4 bits (160), Expect = 3e-13
 Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 39/137 (28%)

Query: 1   VATQSKSSIVLT-RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL--V 57
           +  ++K   VLT + IL     L H  +  L    +++ ++ LVM++C GG+L   L   
Sbjct: 39  MIKRNKVKRVLTEQEIL---ATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQ 95

Query: 58  SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
               LSE+  R +  +++ AL              E LH                G    
Sbjct: 96  PGKCLSEEVARFYAAEVLLAL--------------EYLH--------------LLG---- 123

Query: 118 RIVHRDLKPQNILLSHS 134
            IV+RDLKP+NILL  S
Sbjct: 124 -IVYRDLKPENILLHES 139

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 64.7 bits (158), Expect = 4e-13
 Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 43/145 (29%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           +K L  L H N+V+    +   + VY+ ME+C+GG L + L     L E  IR++  Q++
Sbjct: 50  MKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLL 109

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           + L                LH                      IVHRD+KP NI L H+ 
Sbjct: 110 EGL--------------AYLHSH-------------------GIVHRDIKPANIFLDHN- 135

Query: 136 GKQYPQPQHIKLKIADFGFARFLQD 160
                      +K+ DFG A  L++
Sbjct: 136 ---------GVIKLGDFGCAVKLKN 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 64.3 bits (157), Expect = 5e-13
 Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 46/152 (30%)

Query: 12  TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIR 68
            R++L E   L EL+H  +V L +  + ++++YLV++   GGDL  +L  K   SE+ ++
Sbjct: 44  VRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVK 103

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
            ++ +IV AL              E LH K                    I+HRD+KP N
Sbjct: 104 FWICEIVLAL--------------EYLHSK-------------------GIIHRDIKPDN 130

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ILL           +   + I DF  A  +  
Sbjct: 131 ILLD----------EQGHVHITDFNIATKVTP 152

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 63.7 bits (156), Expect = 8e-13
 Identities = 40/149 (26%), Positives = 60/149 (40%), Gaps = 48/149 (32%)

Query: 13  RHILKELTELHHENVVELLHCKESDQH--VYLVMEFCNGGDLADYLVSKGT-LSEDTIRI 69
           R I K L +L H N+V L     S     +Y+V E+ +  DL   L S     +E  I+ 
Sbjct: 47  REI-KLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKC 104

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           ++KQ+++ L+      LH                               I+HRD+K  NI
Sbjct: 105 YMKQLLEGLQ-----YLHSNG----------------------------ILHRDIKGSNI 131

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           L+++             LK+ADFG AR  
Sbjct: 132 LINNDGV----------LKLADFGLARPY 150

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 63.3 bits (155), Expect = 1e-12
 Identities = 39/147 (26%), Positives = 57/147 (38%), Gaps = 50/147 (34%)

Query: 16  LKELTEL----HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRI 69
           L+E+  L     H N+V+L      +  +Y V E+  G +L   +        SE  IR 
Sbjct: 45  LREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYMEG-NLYQLMKDRKGKPFSESVIRS 103

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            + QI+Q L                +H     +H +               HRDLKP+N+
Sbjct: 104 IIYQILQGL--------------AHIH-----KHGFF--------------HRDLKPENL 130

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFAR 156
           L+S              +KIADFG AR
Sbjct: 131 LVSGPE----------VVKIADFGLAR 147

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 63.0 bits (154), Expect = 1e-12
 Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 43/142 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L  L H N+V+ +   E+   +Y+++E+   G L   +   G   E  + +++ Q++Q L
Sbjct: 53  LKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGL 112

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH + V                            +HRD+K  NIL +      
Sbjct: 113 AY-----LHEQGV----------------------------IHRDIKAANILTTKD---- 135

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
                 +KL  ADFG A  L D
Sbjct: 136 ----GVVKL--ADFGVATKLND 151

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 40/145 (27%), Positives = 64/145 (44%), Gaps = 48/145 (33%)

Query: 16  LKELTELHHENVV---ELLHCKESD-QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
           LK L    H+N++   ++L    +D + VY+VM+     DL   + S   L+E+ IR FL
Sbjct: 55  LKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLM-ESDLHHIIHSDQPLTEEHIRYFL 113

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
            Q+++ LK               +H                    A ++HRDLKP N+L+
Sbjct: 114 YQLLRGLK--------------YIHS-------------------ANVIHRDLKPSNLLV 140

Query: 132 SHSFGKQYPQPQHIKLKIADFGFAR 156
           +          +  +L+I DFG AR
Sbjct: 141 N----------EDCELRIGDFGMAR 155

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 62.5 bits (152), Expect = 2e-12
 Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 43/131 (32%)

Query: 26  NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE 85
            V +L +  +S  ++YLVME+ NGGD A  + + G L ED  + ++ ++V          
Sbjct: 58  YVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVV---------- 107

Query: 86  LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHI 145
                 VE LH                G     I+HRD+KP+N+L+         Q  H+
Sbjct: 108 ----LGVEDLHQ--------------RG-----IIHRDIKPENLLID--------QTGHL 136

Query: 146 KLKIADFGFAR 156
           KL   DFG +R
Sbjct: 137 KL--TDFGLSR 145

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 62.5 bits (152), Expect = 3e-12
 Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 45/139 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQA 77
           L EL H+N+V L     SD+ + LV E+C+  DL  Y  S  G +  + ++ F+ Q+++ 
Sbjct: 53  LKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKG 111

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L                  C                     ++HRDLKPQN+L++     
Sbjct: 112 LA----------------FCHSH-----------------NVLHRDLKPQNLLIN----- 133

Query: 138 QYPQPQHIKLKIADFGFAR 156
                ++ +LK+ADFG AR
Sbjct: 134 -----KNGELKLADFGLAR 147

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 61.8 bits (150), Expect = 4e-12
 Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 43/141 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L EL HEN+V+ L       H+ + +E+  GG +A  L + G   E  +R F++QI++ L
Sbjct: 60  LKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGL 119

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                           LH +                    I+HRD+K  NIL+ +  G  
Sbjct: 120 --------------NYLHNRG-------------------IIHRDIKGANILVDNKGG-- 144

Query: 139 YPQPQHIKLKIADFGFARFLQ 159
                   +KI+DFG ++ L+
Sbjct: 145 --------IKISDFGISKKLE 157

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 61.3 bits (149), Expect = 7e-12
 Identities = 39/141 (27%), Positives = 58/141 (41%), Gaps = 47/141 (33%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS---KGTLSEDTIRIFLKQIV 75
           L EL H N+V L      +  +YL+ EF +  DL  YL S      +  + ++ +L QI+
Sbjct: 53  LKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQIL 111

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           Q                               + FC+     R++HRDLKPQN+L+    
Sbjct: 112 QG------------------------------ILFCHS---RRVLHRDLKPQNLLID--- 135

Query: 136 GKQYPQPQHIKLKIADFGFAR 156
                      +K+ADFG AR
Sbjct: 136 -------NKGVIKLADFGLAR 149

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 61.5 bits (150), Expect = 8e-12
 Identities = 44/147 (29%), Positives = 61/147 (41%), Gaps = 51/147 (34%)

Query: 16  LKELTELHHENVVELLHC------KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           L+ L  + HENV+ LL         E  Q VYLV     G DL + +  +  LS+D I+ 
Sbjct: 65  LRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKCQ-KLSDDHIQF 122

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            + QI++ LK               +H                    A I+HRDLKP NI
Sbjct: 123 LVYQILRGLK--------------YIHS-------------------AGIIHRDLKPSNI 149

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFAR 156
            ++          +  +LKI DFG AR
Sbjct: 150 AVN----------EDCELKILDFGLAR 166

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 60.4 bits (147), Expect = 1e-11
 Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 48/152 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHV-YLVMEFCNGGDLAD---YLVSKGTLSEDTIR 68
           R  ++ +++ +H NVV+  +         +LVM + +GG L D       +G L E  I 
Sbjct: 47  RKEVQAMSQCNHPNVVKY-YTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIA 105

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             LK++++ L              E LH   S+  +                HRD+K  N
Sbjct: 106 TVLKEVLKGL--------------EYLH---SNGQI----------------HRDIKAGN 132

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ILL           +   +KIADFG +  L D
Sbjct: 133 ILLG----------EDGSVKIADFGVSASLAD 154

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 60.0 bits (145), Expect = 2e-11
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 45/142 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTL-SEDTIRIFLKQIVQ 76
           L ++ H N+V      E+D H+Y+VME+C+GGDL   + + +G L  EDTI  +  Q+  
Sbjct: 52  LAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCL 111

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
                 V+ +H +                            R++HRD+K +NI L+    
Sbjct: 112 G-----VQHIHEK----------------------------RVLHRDIKSKNIFLT---- 134

Query: 137 KQYPQPQHIKLKIADFGFARFL 158
                 Q+ K+K+ DFG AR L
Sbjct: 135 ------QNGKVKLGDFGSARLL 150

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 60.5 bits (147), Expect = 2e-11
 Identities = 42/147 (28%), Positives = 60/147 (40%), Gaps = 50/147 (34%)

Query: 16  LKELT---ELHHENVVELLHCKESDQ--HVYLVMEFCNGGDLADYLVS-KGTLSEDTIRI 69
           L+E+T    L H N+VEL           ++LVME+C   DLA  L +     SE  ++ 
Sbjct: 54  LREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCE-QDLASLLDNMPTPFSESQVKC 112

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            + Q+++ L+      LH        +                      I+HRDLK  N+
Sbjct: 113 LMLQLLRGLQY-----LHE-------NF---------------------IIHRDLKVSNL 139

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFAR 156
           LL+              LKIADFG AR
Sbjct: 140 LLTD----------KGCLKIADFGLAR 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 60.5 bits (147), Expect = 2e-11
 Identities = 42/143 (29%), Positives = 63/143 (44%), Gaps = 43/143 (30%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           ++ L +L HEN+V L+      + +YLV EF +   L D       L E  +R +L QI+
Sbjct: 51  IRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQIL 110

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           + +                              EFC+  +   I+HRD+KP+NIL+S S 
Sbjct: 111 RGI------------------------------EFCHSHN---IIHRDIKPENILVSQSG 137

Query: 136 GKQYPQPQHIKLKIADFGFARFL 158
                      +K+ DFGFAR L
Sbjct: 138 ----------VVKLCDFGFARTL 150

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 58.4 bits (142), Expect = 6e-11
 Identities = 37/150 (24%), Positives = 58/150 (38%), Gaps = 47/150 (31%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIF 70
           I+KE   L +     +V+       +  +++VME+C  G ++D +     TL+E+ I   
Sbjct: 45  IIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAI 104

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
           L Q ++ L              E LH                     + +HRD+K  NIL
Sbjct: 105 LYQTLKGL--------------EYLHSN-------------------KKIHRDIKAGNIL 131

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+             KL  ADFG +  L D
Sbjct: 132 LNEE--------GQAKL--ADFGVSGQLTD 151

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 58.7 bits (142), Expect = 6e-11
 Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 46/140 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL--VSKGTLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++       +    I+ +L Q++Q
Sbjct: 53  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYLFQLLQ 111

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 112 GLA------------------------------FCHS---HRVLHRDLKPQNLLIN---- 134

Query: 137 KQYPQPQHIKLKIADFGFAR 156
                   IKL  ADFG AR
Sbjct: 135 ----TEGAIKL--ADFGLAR 148

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 57.9 bits (140), Expect = 1e-10
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 47/141 (33%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS---KGTLSEDTIRIFLKQIV 75
           + EL HEN+V L     ++  + LV E+ +  DL  Y+ +   +G L  +T++ F  Q++
Sbjct: 52  MKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLL 110

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           + + AF      HEN                           R++HRDLKPQN+L++   
Sbjct: 111 KGI-AFC-----HEN---------------------------RVLHRDLKPQNLLIN--- 134

Query: 136 GKQYPQPQHIKLKIADFGFAR 156
                  +  +LK+ADFG AR
Sbjct: 135 -------KRGELKLADFGLAR 148

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 57.9 bits (140), Expect = 1e-10
 Identities = 40/150 (26%), Positives = 64/150 (42%), Gaps = 46/150 (30%)

Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H+ +E   L EL H  +V ++   + +  VY ++EF  GG+L  +L   G    D  + +
Sbjct: 64  HVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFY 123

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             ++V A               E LH K+                   I++RDLKP+N+L
Sbjct: 124 HAELVLAF--------------EYLHSKD-------------------IIYRDLKPENLL 150

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L            H+  K+ DFGFA+ + D
Sbjct: 151 LD--------NKGHV--KVTDFGFAKKVPD 170

Length = 329

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 57.8 bits (139), Expect = 2e-10
 Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 46/168 (27%)

Query: 4   QSKSSIVLTRHILKELTELHHENVVELLH--CKESDQHVYLVMEFCNGGDLADYLVSKGT 61
           + KS +V+  ++++EL    H+N+V  +     +++Q +Y++MEFC+ GDL+        
Sbjct: 54  REKSQLVIEVNVMRELK---HKNIVRYIDRFLNKANQKLYILMEFCDAGDLS-------- 102

Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHH--ENVVELLHCKESDQHVYLVMEFC----NGGD 115
                     + I +  K F   E H   +   +LLH           + +C    +G +
Sbjct: 103 ----------RNIQKCYKMFGKIEEHAIVDITRQLLH----------ALAYCHNLKDGPN 142

Query: 116 LARIVHRDLKPQNILLS---HSFGKQYPQPQHIK----LKIADFGFAR 156
             R++HRDLKPQNI LS      GK   Q  ++      KI DFG ++
Sbjct: 143 GERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSK 190

Length = 1021

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 57.0 bits (138), Expect = 2e-10
 Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 45/140 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           +T L H N+V+LL        +Y+V E+   G L DYL S+G   ++      F   + +
Sbjct: 54  MTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCE 113

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            ++  + K                                   VHRDL  +N+L+S    
Sbjct: 114 GMEYLEEKN---------------------------------FVHRDLAARNVLVS---- 136

Query: 137 KQYPQPQHIKLKIADFGFAR 156
                 + +  K++DFG A+
Sbjct: 137 ------EDLVAKVSDFGLAK 150

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 47/144 (32%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
           I +E   L++     + +          ++++ME+C GG   D L+  G L E  I   L
Sbjct: 46  IQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLD-LLKPGKLDETYIAFIL 104

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
           ++++  L              E LH +                     +HRD+K  NILL
Sbjct: 105 REVLLGL--------------EYLHEE-------------------GKIHRDIKAANILL 131

Query: 132 SHSFGKQYPQPQHIKLKIADFGFA 155
           S          +   +K+ADFG +
Sbjct: 132 S----------EEGDVKLADFGVS 145

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 57.4 bits (139), Expect = 2e-10
 Identities = 43/146 (29%), Positives = 62/146 (42%), Gaps = 49/146 (33%)

Query: 16  LKELTELHHENV---VELLHCKESD--QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           LK L    H+NV   +++L     D  + +Y+V E     DL   +VS   LS D +++F
Sbjct: 50  LKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQS-DLHKIIVSPQPLSSDHVKVF 108

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
           L QI++ LK                         YL          A I+HRD+KP N+L
Sbjct: 109 LYQILRGLK-------------------------YL--------HSAGILHRDIKPGNLL 135

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           ++           +  LKI DFG AR
Sbjct: 136 VN----------SNCVLKICDFGLAR 151

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 57.1 bits (138), Expect = 3e-10
 Identities = 43/130 (33%), Positives = 58/130 (44%), Gaps = 43/130 (33%)

Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           VV +    E+ +H+ +VME+  GGD A  L + G L  D  R++  + V AL        
Sbjct: 63  VVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLAL-------- 114

Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                 E LH               N G    IVHRDLKP N+L++ S G       HIK
Sbjct: 115 ------EYLH---------------NYG----IVHRDLKPDNLLIT-SMG-------HIK 141

Query: 147 LKIADFGFAR 156
           L   DFG ++
Sbjct: 142 L--TDFGLSK 149

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 56.4 bits (136), Expect = 4e-10
 Identities = 45/142 (31%), Positives = 61/142 (42%), Gaps = 44/142 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKQIVQ 76
           L  L H N++E       D+ + +VME+  GG LA+Y+  +    L EDTI  F  QI+ 
Sbjct: 53  LKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILL 112

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
           AL        HH      +H K                    I+HRDLK QNILL     
Sbjct: 113 AL--------HH------VHTKL-------------------ILHRDLKTQNILLDK--- 136

Query: 137 KQYPQPQHIKLKIADFGFARFL 158
                   + +KI DFG ++ L
Sbjct: 137 ------HKMVVKIGDFGISKIL 152

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 56.8 bits (137), Expect = 4e-10
 Identities = 37/130 (28%), Positives = 56/130 (43%), Gaps = 43/130 (33%)

Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           +V L +  +S  +VYLVME+  GGD+   L   G   E+    ++ ++  AL        
Sbjct: 66  IVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALAL-------- 117

Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                 + LH     +H               I+HRDLKP N+L+S+          HIK
Sbjct: 118 ------DYLH-----RH--------------GIIHRDLKPDNMLISNE--------GHIK 144

Query: 147 LKIADFGFAR 156
           L   DFG ++
Sbjct: 145 L--TDFGLSK 152

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 56.2 bits (136), Expect = 5e-10
 Identities = 38/151 (25%), Positives = 65/151 (43%), Gaps = 46/151 (30%)

Query: 12  TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIR 68
             H+  E   L E  +  VV+L +  + + ++YL+ME+  GGD+   L+ K T +E+  R
Sbjct: 45  VAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETR 104

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
            ++ + + A              ++ +H     +  Y              +HRD+KP N
Sbjct: 105 FYIAETILA--------------IDSIH-----KLGY--------------IHRDIKPDN 131

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           +LL            HIKL  +DFG    L+
Sbjct: 132 LLLD--------AKGHIKL--SDFGLCTGLK 152

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 56.2 bits (136), Expect = 5e-10
 Identities = 44/146 (30%), Positives = 60/146 (41%), Gaps = 50/146 (34%)

Query: 16  LKELTELHHENVVELLHCK-----ESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           +K L    HEN++ +L        ES   VY+V E     DL   + ++  LS D I+ F
Sbjct: 54  IKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIKTQ-HLSNDHIQYF 111

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
           L QI++ LK      +H  NV                            +HRDLKP N+L
Sbjct: 112 LYQILRGLKY-----IHSANV----------------------------LHRDLKPSNLL 138

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           L+ +            LKI DFG AR
Sbjct: 139 LNTN----------CDLKICDFGLAR 154

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 55.6 bits (134), Expect = 8e-10
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 45/140 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSED--TIRIFLKQIVQ 76
           L E+ H N+V L     S++ +YLV E+ +  DL  ++ S    +++   I+ +L QI++
Sbjct: 55  LKEMQHGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILR 113

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            +                               +C+     R++HRDLKPQN+L+     
Sbjct: 114 GIA------------------------------YCHS---HRVLHRDLKPQNLLIDRRTN 140

Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     LK+ADFG AR
Sbjct: 141 ---------ALKLADFGLAR 151

Length = 294

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 55.1 bits (133), Expect = 1e-09
 Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 51/142 (35%)

Query: 19  LTELHHENVVEL---LHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQI 74
           L +L H N+V L   +H K++   + LV E+ +  DL  Y+   G  LS   +R+FL Q+
Sbjct: 57  LKDLKHANIVTLHDIIHTKKT---LTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQL 112

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           ++ L                               +C+     R++HRDLKPQN+L+S  
Sbjct: 113 LRGL------------------------------AYCHQ---RRVLHRDLKPQNLLISER 139

Query: 135 FGKQYPQPQHIKLKIADFGFAR 156
                      +LK+ADFG AR
Sbjct: 140 G----------ELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 55.2 bits (133), Expect = 1e-09
 Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 46/144 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           R+IL+ +    H  +V+L++  ++   +YL++E+ +GG+L  +L  +G   EDT   +L 
Sbjct: 51  RNILEAV---KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLS 107

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I  AL     + LH +                             I++RDLKP+NILL 
Sbjct: 108 EISLAL-----EHLHQQG----------------------------IIYRDLKPENILLD 134

Query: 133 HSFGKQYPQPQHIKLKIADFGFAR 156
                      H+KL   DFG  +
Sbjct: 135 AQ--------GHVKL--TDFGLCK 148

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 55.5 bits (134), Expect = 1e-09
 Identities = 38/141 (26%), Positives = 53/141 (37%), Gaps = 44/141 (31%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           LK + E+ HEN++ L+        + LVM+     DL   +  K  L+E  ++  L QI+
Sbjct: 71  LKIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQIL 129

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
             L       LH                                +HRDL P NI ++ S 
Sbjct: 130 NGL-----NVLHKWY----------------------------FMHRDLSPANIFIN-SK 155

Query: 136 GKQYPQPQHIKLKIADFGFAR 156
           G           KIADFG AR
Sbjct: 156 G---------ICKIADFGLAR 167

Length = 335

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 54.5 bits (131), Expect = 2e-09
 Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 45/149 (30%)

Query: 12  TRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTL-SEDTIRI 69
           +R  +  L+ + H N+V+     E + ++Y+VM++C GGDL   + + +G L  ED I  
Sbjct: 46  SRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILD 105

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           +  QI  ALK                       HV+            +I+HRD+K QNI
Sbjct: 106 WFVQICLALK-----------------------HVH----------DRKILHRDIKSQNI 132

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFL 158
            L+          +   +K+ DFG AR L
Sbjct: 133 FLT----------KDGTIKLGDFGIARVL 151

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 54.9 bits (132), Expect = 2e-09
 Identities = 39/129 (30%), Positives = 57/129 (44%), Gaps = 43/129 (33%)

Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           VV L +  +  Q++YL+MEF  GGDL   L+   T SED  R ++ + V A++A     +
Sbjct: 63  VVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEA-----V 117

Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
           H                    + F         +HRD+KP NIL+            HIK
Sbjct: 118 HK-------------------LGF---------IHRDIKPDNILIDRG--------GHIK 141

Query: 147 LKIADFGFA 155
           L  +DFG +
Sbjct: 142 L--SDFGLS 148

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 54.5 bits (132), Expect = 2e-09
 Identities = 35/144 (24%), Positives = 55/144 (38%), Gaps = 53/144 (36%)

Query: 19  LTELHHENVVELLHCKE----SDQ-HVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLK 72
           L +L H N+V +   KE    S+   +Y+VME+    DL   +   K    +  ++  + 
Sbjct: 58  LLKLQHPNIVTV---KEVVVGSNLDKIYMVMEYVE-HDLKSLMETMKQPFLQSEVKCLML 113

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           Q++  +         H+N                            I+HRDLK  N+LL+
Sbjct: 114 QLLSGVAHL------HDN---------------------------WILHRDLKTSNLLLN 140

Query: 133 HSFGKQYPQPQHIKLKIADFGFAR 156
           +             LKI DFG AR
Sbjct: 141 NR----------GILKICDFGLAR 154

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 54.2 bits (131), Expect = 2e-09
 Identities = 38/143 (26%), Positives = 55/143 (38%), Gaps = 47/143 (32%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLAD-YLVSKGTLSEDTIRIFLK 72
            +LKE     H N+V           +++VME+C GG L D Y V++G LSE  I    +
Sbjct: 52  SMLKECR---HPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCR 108

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           + ++ L       LH                                +HRD+K  NILL+
Sbjct: 109 ETLKGLAY-----LHETGK----------------------------IHRDIKGANILLT 135

Query: 133 HSFGKQYPQPQHIKLKIADFGFA 155
                       +KL  ADFG +
Sbjct: 136 ED--------GDVKL--ADFGVS 148

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 54.3 bits (131), Expect = 2e-09
 Identities = 44/146 (30%), Positives = 62/146 (42%), Gaps = 49/146 (33%)

Query: 16  LKELTELHHENVVEL-----LHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           +K L  L HENV+ +        +E+   VY+V E  +  DL   + S  TLS+D  + F
Sbjct: 55  IKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMDT-DLHQIIRSSQTLSDDHCQYF 113

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
           L Q+++ LK      +H  NV                            +HRDLKP N+L
Sbjct: 114 LYQLLRGLKY-----IHSANV----------------------------LHRDLKPSNLL 140

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           L+ +            LKI DFG AR
Sbjct: 141 LNAN----------CDLKICDFGLAR 156

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 52.8 bits (127), Expect = 7e-09
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 44/132 (33%)

Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
            H N+VE+         +++VMEF  GG L D +V+   ++E+ I      +++AL    
Sbjct: 74  QHPNIVEMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLAVLKAL---- 128

Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQP 142
                       LH +                    ++HRD+K  +ILL+          
Sbjct: 129 ----------SFLHAQ-------------------GVIHRDIKSDSILLTSDG------- 152

Query: 143 QHIKLKIADFGF 154
              ++K++DFGF
Sbjct: 153 ---RVKLSDFGF 161

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 52.7 bits (127), Expect = 8e-09
 Identities = 40/156 (25%), Positives = 59/156 (37%), Gaps = 57/156 (36%)

Query: 15  ILKELTELHHENVVE-------LLHCKESDQHVYLVMEFCNGG---DLADYLVSKG-TLS 63
           IL++ +  +H N+                DQ ++LVME C GG   DL   L  KG  L 
Sbjct: 55  ILRKYS--NHPNIATFYGAFIKKNPPGNDDQ-LWLVMELCGGGSVTDLVKGLRKKGKRLK 111

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
           E+ I   L++ ++ L       LH   V                            +HRD
Sbjct: 112 EEWIAYILRETLRGL-----AYLHENKV----------------------------IHRD 138

Query: 124 LKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           +K QNILL+ +            +K+ DFG +  L 
Sbjct: 139 IKGQNILLTKNAE----------VKLVDFGVSAQLD 164

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 52.4 bits (126), Expect = 9e-09
 Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 45/144 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTL-SEDTIRIFLKQIVQ 76
           L+ L H N++   +    D  + + ME+ NGG L D +V  KG L  E+ +  +L QIV 
Sbjct: 53  LSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVS 112

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
           A     V  +H                               I+HRD+K  NI L+ +  
Sbjct: 113 A-----VSYIHKAG----------------------------ILHRDIKTLNIFLTKAG- 138

Query: 137 KQYPQPQHIKLKIADFGFARFLQD 160
                     +K+ DFG ++ L  
Sbjct: 139 ---------LIKLGDFGISKILGS 153

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 52.4 bits (126), Expect = 1e-08
 Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 43/138 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L++L H N+V+ L  +  + ++Y+ +E   GG LA  L   G+  E  IR++ +QI+  L
Sbjct: 56  LSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGL 115

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                         E LH +                     VHRD+K  NIL+  +    
Sbjct: 116 --------------EYLHDR-------------------NTVHRDIKGANILVDTNG--- 139

Query: 139 YPQPQHIKLKIADFGFAR 156
                   +K+ADFG A+
Sbjct: 140 -------VVKLADFGMAK 150

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 52.4 bits (126), Expect = 1e-08
 Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 44/136 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQA 77
           L+E  H N+V L      +  +++++EFC+GG L   ++     L+E  IR   +Q+++A
Sbjct: 56  LSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEA 115

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L                LH                     +++HRDLK  NILL+     
Sbjct: 116 LN--------------FLHSH-------------------KVIHRDLKAGNILLT----- 137

Query: 138 QYPQPQHIKLKIADFG 153
                    +K+ADFG
Sbjct: 138 -----LDGDVKLADFG 148

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 52.1 bits (125), Expect = 1e-08
 Identities = 49/158 (31%), Positives = 68/158 (43%), Gaps = 50/158 (31%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLHCKESD-QHVYLVMEFCNGGDLADYLVSKGTL 62
           S+ VL +   +E   L  L HEN++ L     S  + +Y V E   G DL   L S+  L
Sbjct: 48  STPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELL-GTDLHRLLTSR-PL 105

Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            +  I+ FL QI++ LK               +H                    A +VHR
Sbjct: 106 EKQFIQYFLYQILRGLK--------------YVHS-------------------AGVVHR 132

Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           DLKP NIL++          ++  LKI DFG AR +QD
Sbjct: 133 DLKPSNILIN----------ENCDLKICDFGLAR-IQD 159

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 51.6 bits (124), Expect = 2e-08
 Identities = 36/147 (24%), Positives = 52/147 (35%), Gaps = 36/147 (24%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
              L E   + E +  +VV LL    + Q   +VME    GDL  YL  +    E     
Sbjct: 54  IEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYL--RSRRPEAENNP 111

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            L       K  Q+         E+     +D   YL  +        + VHRDL  +N 
Sbjct: 112 GL-GPPTLQKFIQM-------AAEI-----ADGMAYLAAK--------KFVHRDLAARNC 150

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFAR 156
           +++              +KI DFG  R
Sbjct: 151 MVAEDL----------TVKIGDFGMTR 167

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 44/129 (34%)

Query: 25  ENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK 84
           E +V+L +  + D+++Y+VME+  GGDL + L+S   + E   R +  ++V AL A    
Sbjct: 103 EWIVQLHYAFQDDKYLYMVMEYMPGGDLVN-LMSNYDIPEKWARFYTAEVVLALDA---- 157

Query: 85  ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQH 144
            +H                    M F         +HRD+KP N+LL  S         H
Sbjct: 158 -IHS-------------------MGF---------IHRDVKPDNMLLDKS--------GH 180

Query: 145 IKLKIADFG 153
           +KL  ADFG
Sbjct: 181 LKL--ADFG 187

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 51.5 bits (124), Expect = 2e-08
 Identities = 32/115 (27%), Positives = 45/115 (39%), Gaps = 45/115 (39%)

Query: 84  KELHHENVVELL--HCKESDQHVYLVMEFCNGGDLARIV--------------------- 120
           +EL HENVV L+    + +D+ VYL+ ++    DL +I+                     
Sbjct: 57  RELKHENVVSLVEVFLEHADKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLW 115

Query: 121 ---------------HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
                          HRDLKP NIL+    G     P+   +KI D G AR    
Sbjct: 116 QILNGVHYLHSNWVLHRDLKPANILVM-GEG-----PERGVVKIGDLGLARLFNA 164

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 51.3 bits (123), Expect = 2e-08
 Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 66/172 (38%)

Query: 9   IVLT-----RHILKE---LTELHHENVVELLHCKESDQH--------------VYLVMEF 46
           IVLT     +H L+E   +  L H+N+V++                       VY+V E 
Sbjct: 38  IVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQE- 96

Query: 47  CNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL 106
               DLA+ ++ +G LSE+  R+F+ Q+++ LK      +H  NV               
Sbjct: 97  YMETDLAN-VLEQGPLSEEHARLFMYQLLRGLKY-----IHSANV--------------- 135

Query: 107 VMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
                        +HRDLKP N+ ++          + + LKI DFG AR +
Sbjct: 136 -------------LHRDLKPANVFINT---------EDLVLKIGDFGLARIV 165

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 51.4 bits (124), Expect = 2e-08
 Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 49/143 (34%)

Query: 16  LKELTELHHENVVELL--HCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
           L+EL    H N+V+LL     E+D+ +YLV E+    DL   ++    L +   R  + Q
Sbjct: 60  LQELG--DHPNIVKLLNVIKAENDKDIYLVFEYME-TDLHA-VIRANILEDVHKRYIMYQ 115

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           +++ALK               +H                      ++HRDLKP NILL+ 
Sbjct: 116 LLKALK--------------YIHS-------------------GNVIHRDLKPSNILLN- 141

Query: 134 SFGKQYPQPQHIKLKIADFGFAR 156
                       ++K+ADFG AR
Sbjct: 142 ---------SDCRVKLADFGLAR 155

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 51.1 bits (122), Expect = 3e-08
 Identities = 41/142 (28%), Positives = 63/142 (44%), Gaps = 51/142 (35%)

Query: 19  LTELHHENVV---ELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQI 74
           L  L H N+V   +++H KE+   V+  M      DLA Y++   G L    +R+F+ Q+
Sbjct: 57  LKGLKHANIVLLHDIIHTKETLTFVFEYMH----TDLAQYMIQHPGGLHPYNVRLFMFQL 112

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           ++ L       +H +                             I+HRDLKPQN+L+S+ 
Sbjct: 113 LRGLAY-----IHGQ----------------------------HILHRDLKPQNLLISY- 138

Query: 135 FGKQYPQPQHIKLKIADFGFAR 156
            G         +LK+ADFG AR
Sbjct: 139 LG---------ELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 51.3 bits (123), Expect = 3e-08
 Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 43/135 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E  +E VV+L +  +   ++Y VM++  GGD+   L+  G   ED  R ++ ++  A 
Sbjct: 55  LAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCA- 113

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                        +E +H           M F         +HRD+KP NIL+       
Sbjct: 114 -------------IESVH----------KMGF---------IHRDIKPDNILID------ 135

Query: 139 YPQPQHIKLKIADFG 153
             +  HIKL   DFG
Sbjct: 136 --RDGHIKL--TDFG 146

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 51.4 bits (123), Expect = 3e-08
 Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 46/131 (35%)

Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVK 84
           + +L +  +   ++YLVME+  GGDL   L+++      ED  + +L ++V A+      
Sbjct: 63  IPQLQYAFQDKDNLYLVMEYQPGGDLLS-LLNRYEDQFDEDMAQFYLAELVLAI------ 115

Query: 85  ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQH 144
                             H    M +         VHRD+KP+N+L+    G       H
Sbjct: 116 ------------------HSVHQMGY---------VHRDIKPENVLIDR-TG-------H 140

Query: 145 IKLKIADFGFA 155
           IKL  ADFG A
Sbjct: 141 IKL--ADFGSA 149

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 51.0 bits (122), Expect = 3e-08
 Identities = 43/157 (27%), Positives = 61/157 (38%), Gaps = 48/157 (30%)

Query: 4   QSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS----K 59
           +S   IV    I+KE  +L H N+V        +  +Y+VM+   G  L ++  S    K
Sbjct: 50  KSIGDIVSEVTIIKE--QLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKK 107

Query: 60  GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARI 119
              +E+ I     Q+V AL+      LH E                            RI
Sbjct: 108 QRFTEERIWNIFVQMVLALRY-----LHKEK---------------------------RI 135

Query: 120 VHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           VHRDL P NI+L           +  K+ I DFG A+
Sbjct: 136 VHRDLTPNNIMLG----------EDDKVTITDFGLAK 162

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 50.6 bits (121), Expect = 4e-08
 Identities = 40/140 (28%), Positives = 58/140 (41%), Gaps = 45/140 (32%)

Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLS--EDTIRIFLKQIVQAL 78
           L H N+V+ L     +    + ME   GG L+  L SK G L   E TI  + KQI++ L
Sbjct: 62  LKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGL 121

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           K        H+N                           +IVHRD+K  N+L++   G  
Sbjct: 122 KYL------HDN---------------------------QIVHRDIKGDNVLVNTYSG-- 146

Query: 139 YPQPQHIKLKIADFGFARFL 158
                   +KI+DFG ++ L
Sbjct: 147 -------VVKISDFGTSKRL 159

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 50.3 bits (120), Expect = 5e-08
 Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 44/144 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTL-SEDTIRIFLKQIVQ 76
           L ++ H N+V      + +  +++VME+C+GGDL   +   +G L SED I  +  QI  
Sbjct: 53  LAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQI-- 110

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
              +  +K +H                              +I+HRD+K QNI LS +  
Sbjct: 111 ---SLGLKHIHDR----------------------------KILHRDIKSQNIFLSKN-- 137

Query: 137 KQYPQPQHIKLKIADFGFARFLQD 160
                   +  K+ DFG AR L D
Sbjct: 138 -------GMVAKLGDFGIARQLND 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 50.6 bits (121), Expect = 5e-08
 Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 43/141 (30%)

Query: 22  LHHENVVELLHCKES-DQHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRIFLKQIVQALK 79
           L+H N+V LL   E+    ++ V E+  G  L + L + G L   +T R+ L Q++ AL 
Sbjct: 35  LYHPNIVALLDSGEAPPGLLFAVFEYVPGRTLREVLAADGALPAGETGRLML-QVLDALA 93

Query: 80  AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
                   H                              IVHRDLKPQNI++S +  + +
Sbjct: 94  C------AHNQ---------------------------GIVHRDLKPQNIMVSQTGVRPH 120

Query: 140 PQPQHIKLKIADFGFARFLQD 160
                   K+ DFG    L  
Sbjct: 121 A-------KVLDFGIGTLLPG 134

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 50.1 bits (120), Expect = 7e-08
 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 43/130 (33%)

Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H  + +L  C ++   ++ VME+ NGGDL  ++   G   E   R +  +IV  L+    
Sbjct: 55  HPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQ---- 110

Query: 84  KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQ 143
                      LH +                    I++RDLK  N+LL            
Sbjct: 111 ----------FLHERG-------------------IIYRDLKLDNVLLDSE--------G 133

Query: 144 HIKLKIADFG 153
           HI  KIADFG
Sbjct: 134 HI--KIADFG 141

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 49.7 bits (119), Expect = 8e-08
 Identities = 49/160 (30%), Positives = 66/160 (41%), Gaps = 58/160 (36%)

Query: 8   SIVLTRHILKELTELHHENVVELL---HCKESDQH-----VYLVMEFCNGGDLADYLVSK 59
            I   R I K L  L HENVV L+     K +  +      YLV EFC   DLA  L +K
Sbjct: 55  PITALREI-KILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNK 112

Query: 60  G---TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
               TLSE  I+  +K ++  L  + +    H N                          
Sbjct: 113 NVKFTLSE--IKKVMKMLLNGL--YYI----HRN-------------------------- 138

Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
            +I+HRD+K  NIL++          +   LK+ADFG AR
Sbjct: 139 -KILHRDMKAANILIT----------KDGILKLADFGLAR 167

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 49.8 bits (119), Expect = 9e-08
 Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 46/144 (31%)

Query: 16  LKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLK 72
           LK ++ L +HEN+V LL        + ++ E+C  GDL ++L  K    L+ + +  F  
Sbjct: 89  LKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSY 148

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           Q+ + +                          +L  + C        +HRDL  +N+LL+
Sbjct: 149 QVAKGMA-------------------------FLASKNC--------IHRDLAARNVLLT 175

Query: 133 HSFGKQYPQPQHIKLKIADFGFAR 156
           H           I +KI DFG AR
Sbjct: 176 HG---------KI-VKICDFGLAR 189

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 49.4 bits (118), Expect = 9e-08
 Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 43/138 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L H N+V+ L  + +++++ + +E+  GG +   L + G   E  +R F +Q+++ L
Sbjct: 62  LKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGL 121

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
            A+    LH +                             I+HRDLK  N+L+       
Sbjct: 122 -AY----LHSKG----------------------------ILHRDLKADNLLVD------ 142

Query: 139 YPQPQHIKLKIADFGFAR 156
                    KI+DFG ++
Sbjct: 143 ----ADGICKISDFGISK 156

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 49.1 bits (117), Expect = 1e-07
 Identities = 34/142 (23%), Positives = 55/142 (38%), Gaps = 51/142 (35%)

Query: 54  DYLVSKGTLSEDTIRI--FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFC 111
              V+  TL EDT+ +  FLK+      A  +KE+ H N+V+LL     +   Y++ EF 
Sbjct: 31  SLTVAVKTLKEDTMEVEEFLKE------AAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84

Query: 112 NGGDL---------------------------------ARIVHRDLKPQNILLSHSFGKQ 138
             G+L                                    +HRDL  +N L+       
Sbjct: 85  TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG------ 138

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
               ++  +K+ADFG +R +  
Sbjct: 139 ----ENHLVKVADFGLSRLMTG 156

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 48.9 bits (117), Expect = 1e-07
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 46/155 (29%)

Query: 10  VLTRHILKELTELH---HENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSED 65
            + + IL+EL  LH      +V       ++  + + ME+ +GG L   L   +G + E 
Sbjct: 41  AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPER 100

Query: 66  TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLK 125
            +      +++ L       LH              +H              +I+HRD+K
Sbjct: 101 ILGKIAVAVLKGLT-----YLHE-------------KH--------------KIIHRDVK 128

Query: 126 PQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           P NIL++   G         ++K+ DFG +  L +
Sbjct: 129 PSNILVNSR-G---------QIKLCDFGVSGQLVN 153

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 28/145 (19%), Positives = 58/145 (40%), Gaps = 44/145 (30%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           +L +L +    N+ +          ++++ME+  GG +   L+  G ++E  I + ++++
Sbjct: 52  LLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRT-LMKAGPIAEKYISVIIREV 110

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           + ALK      +H                               ++HRD+K  NIL++++
Sbjct: 111 LVALKY-----IHKVG----------------------------VIHRDIKAANILVTNT 137

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQ 159
                       +K+ DFG A  L 
Sbjct: 138 G----------NVKLCDFGVAALLN 152

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 48.6 bits (116), Expect = 2e-07
 Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 37/138 (26%)

Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     +  +Y+V+E+   G+L D+L ++    E                   
Sbjct: 75  HKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYA----------------- 117

Query: 84  KELHHENVVELLHCKESDQHVYLV---MEFCNGGDLA--RIVHRDLKPQNILLSHSFGKQ 138
                    E L  K+     Y V   MEF     LA  + +HRDL  +N+L++      
Sbjct: 118 SPDDPRPPEETLTQKDLVSFAYQVARGMEF-----LASKKCIHRDLAARNVLVTEDH--- 169

Query: 139 YPQPQHIKLKIADFGFAR 156
                   +KIADFG AR
Sbjct: 170 -------VMKIADFGLAR 180

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 47.8 bits (114), Expect = 4e-07
 Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 45/141 (31%)

Query: 21  ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKQIVQALK 79
           +  H ++V+L+     +  V++VME    G+L  YL V+K +L   ++ ++  Q+  AL 
Sbjct: 63  QFDHPHIVKLIGVIT-ENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTAL- 120

Query: 80  AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
                                    YL        +  R VHRD+  +N+L+S       
Sbjct: 121 ------------------------AYL--------ESKRFVHRDIAARNVLVS------- 141

Query: 140 PQPQHIKLKIADFGFARFLQD 160
             P  +KL   DFG +R+L+D
Sbjct: 142 -SPDCVKL--GDFGLSRYLED 159

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 47.8 bits (114), Expect = 4e-07
 Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 43/140 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L H N+V L+      + ++LV E+C+   L +   +   + E  I+  + Q +QA+
Sbjct: 54  LKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAV 113

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                                          FC+       +HRD+KP+NIL++      
Sbjct: 114 ------------------------------NFCHK---HNCIHRDVKPENILIT------ 134

Query: 139 YPQPQHIKLKIADFGFARFL 158
               +  ++K+ DFGFAR L
Sbjct: 135 ----KQGQIKLCDFGFARIL 150

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 47.7 bits (113), Expect = 4e-07
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 44/136 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +  HENVVE+ +       +++VMEF  GG L D +V+   ++E+ I      +++AL
Sbjct: 71  MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLKAL 129

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH + V                            +HRD+K  +ILL+H     
Sbjct: 130 SV-----LHAQGV----------------------------IHRDIKSDSILLTHDG--- 153

Query: 139 YPQPQHIKLKIADFGF 154
                  ++K++DFGF
Sbjct: 154 -------RVKLSDFGF 162

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 47.6 bits (113), Expect = 4e-07
 Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 51/149 (34%)

Query: 15  ILKELTELHHENVVELLH-CKES--DQH--VYLVMEFCNGGDLADYL--VSKGTLSEDTI 67
           +LK L    H N+V L+  C  S  D+   V LV E  +  DL  YL  V    L  +TI
Sbjct: 52  LLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETI 110

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
           +  ++Q ++ L              + LH                      IVHRDLKP+
Sbjct: 111 KDLMRQFLRGL--------------DFLH-------------------ANCIVHRDLKPE 137

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           NIL++ S G         ++K+ADFG AR
Sbjct: 138 NILVT-SGG---------QVKLADFGLAR 156

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 47.5 bits (113), Expect = 5e-07
 Identities = 33/144 (22%), Positives = 48/144 (33%), Gaps = 45/144 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQ 76
           L +L    ++           + +VME+   GDL   L       L ED +  F  QI+ 
Sbjct: 53  LAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILL 112

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                LH K                   +I+HRD+K  N+ L     
Sbjct: 113 GLA--------------HLHSK-------------------KILHRDIKSLNLFLD---- 135

Query: 137 KQYPQPQHIKLKIADFGFARFLQD 160
                  +  +KI D G A+ L D
Sbjct: 136 ------AYDNVKIGDLGVAKLLSD 153

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 47.5 bits (113), Expect = 6e-07
 Identities = 36/138 (26%), Positives = 61/138 (44%), Gaps = 43/138 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E++H  +V+L +  +++  +YL+++F  GGDL   L  +   +E+ ++ +L ++  AL
Sbjct: 52  LAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 111

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH                               I++RDLKP+NILL       
Sbjct: 112 -----DHLHSLG----------------------------IIYRDLKPENILLDEE---- 134

Query: 139 YPQPQHIKLKIADFGFAR 156
                HIKL   DFG ++
Sbjct: 135 ----GHIKL--TDFGLSK 146

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 47.3 bits (112), Expect = 6e-07
 Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 46/149 (30%)

Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           HI  E   L E     VV++ +  +  +++YL+MEF  GGD+   L+ K TLSE+  + +
Sbjct: 47  HIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFY 106

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
           + + V A+ A     +H                                +HRD+KP N+L
Sbjct: 107 IAETVLAIDA-----IHQLG----------------------------FIHRDIKPDNLL 133

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           L            H+KL  +DFG    L+
Sbjct: 134 LDAK--------GHVKL--SDFGLCTGLK 152

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 47.1 bits (112), Expect = 7e-07
 Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 44/127 (34%)

Query: 31  LHCK-ESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE 89
           L C  ++ +H++ VME+ NGGDL  ++ S G   E   R +  +I+  L+          
Sbjct: 61  LFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQ---------- 110

Query: 90  NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKI 149
                LH K                    I++RDLK  N+LL            HI  KI
Sbjct: 111 ----FLHKKG-------------------IIYRDLKLDNVLLDKD--------GHI--KI 137

Query: 150 ADFGFAR 156
           ADFG  +
Sbjct: 138 ADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 46.9 bits (111), Expect = 7e-07
 Identities = 39/139 (28%), Positives = 62/139 (44%), Gaps = 45/139 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQA 77
           L +L H N+V L     +D+ + LV E+ +  DL  Y+   G  +S   ++IFL QI++ 
Sbjct: 58  LKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRG 116

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L                 +C                    +++HRDLKPQN+L++     
Sbjct: 117 LA----------------YCHRR-----------------KVLHRDLKPQNLLIN----- 138

Query: 138 QYPQPQHIKLKIADFGFAR 156
                +  +LK+ADFG AR
Sbjct: 139 -----ERGELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 47.0 bits (112), Expect = 8e-07
 Identities = 35/130 (26%), Positives = 49/130 (37%), Gaps = 44/130 (33%)

Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H  +V L  C +++ HV  VME+  GGDL  + +     SE     +   +V  L+    
Sbjct: 61  HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMH-IHTDVFSEPRAVFYAACVVLGLQYL-- 117

Query: 84  KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQ 143
               HEN                           +IV+RDLK  N+LL            
Sbjct: 118 ----HEN---------------------------KIVYRDLKLDNLLLD--------TEG 138

Query: 144 HIKLKIADFG 153
            +  KIADFG
Sbjct: 139 FV--KIADFG 146

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 46.6 bits (110), Expect = 9e-07
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 45/139 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQA 77
           L  L H N+V L     +++ + LV E+ +  DL  YL + G L S   ++IF+ Q+++ 
Sbjct: 57  LKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRG 115

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L                 +C +                  +I+HRDLKPQN+L++     
Sbjct: 116 LS----------------YCHKR-----------------KILHRDLKPQNLLIN----- 137

Query: 138 QYPQPQHIKLKIADFGFAR 156
                +  +LK+ADFG AR
Sbjct: 138 -----EKGELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 46.7 bits (111), Expect = 1e-06
 Identities = 39/157 (24%), Positives = 60/157 (38%), Gaps = 49/157 (31%)

Query: 6   KSSIVLTRHILKELTELH------HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK 59
           K  I+    +   LTE        H  +  L +  ++   +  VME+ NGG+L  +L  +
Sbjct: 30  KEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE 89

Query: 60  GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARI 119
              SED  R +  +IV AL                LH  +                   +
Sbjct: 90  RVFSEDRARFYGAEIVSAL--------------GYLHSCD-------------------V 116

Query: 120 VHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           V+RDLK +N++L         +  HI  KI DFG  +
Sbjct: 117 VYRDLKLENLMLD--------KDGHI--KITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 33/150 (22%), Positives = 56/150 (37%), Gaps = 47/150 (31%)

Query: 12  TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIR 68
            +  L+E   + +L H  +V L+   + +  + LVME    G L  YL  +  +    ++
Sbjct: 40  KKEFLREASVMAQLDHPCIVRLIGVCKGEP-LMLVMELAPLGPLLKYLKKRREIPVSDLK 98

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
               Q+   +                          YL        +    VHRDL  +N
Sbjct: 99  ELAHQVAMGMA-------------------------YL--------ESKHFVHRDLAARN 125

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           +LL +         +H + KI+DFG +R L
Sbjct: 126 VLLVN---------RH-QAKISDFGMSRAL 145

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 46.6 bits (110), Expect = 1e-06
 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 44/127 (34%)

Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           VV+L    + D+++Y+VME+  GGDL + L+S   + E   + +  ++V AL A     L
Sbjct: 105 VVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMGL 163

Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                                            +HRD+KP N+LL           +H  
Sbjct: 164 ---------------------------------IHRDVKPDNMLLD----------KHGH 180

Query: 147 LKIADFG 153
           LK+ADFG
Sbjct: 181 LKLADFG 187

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 46.2 bits (110), Expect = 1e-06
 Identities = 40/153 (26%), Positives = 60/153 (39%), Gaps = 54/153 (35%)

Query: 13  RHILKELTELHHENVVELL------HCKESDQH--VYLVMEFCNGGDLADYLVSKG-TLS 63
           R I K L +L H NVV L+        K   +   VY+V  + +  DL+  L +    L+
Sbjct: 56  REI-KILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLT 113

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
           E  I+ ++ Q+++ +                LH                      I+HRD
Sbjct: 114 ESQIKCYMLQLLEGIN--------------YLHEN-------------------HILHRD 140

Query: 124 LKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           +K  NIL+ +             LKIADFG AR
Sbjct: 141 IKAANILIDN----------QGILKIADFGLAR 163

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 46.0 bits (109), Expect = 2e-06
 Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 42/140 (30%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           ++ +  L+H +++ +L     D H  L +E+  GG ++  L   G   E  I  + +Q++
Sbjct: 54  IRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLL 113

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           + L         HEN                           +I+HRD+K  N+L+  S 
Sbjct: 114 RGLSYL------HEN---------------------------QIIHRDVKGANLLID-ST 139

Query: 136 GKQYPQPQHIKLKIADFGFA 155
           G+        +L+IADFG A
Sbjct: 140 GQ--------RLRIADFGAA 151

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 45.7 bits (108), Expect = 2e-06
 Identities = 39/140 (27%), Positives = 53/140 (37%), Gaps = 43/140 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L  L H N+V+ L     D  + + MEF  GG ++  L   G L E     + KQI+   
Sbjct: 56  LKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDG- 114

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               V  LH+  V                            VHRD+K  N++L       
Sbjct: 115 ----VAYLHNNCV----------------------------VHRDIKGNNVML------- 135

Query: 139 YPQPQHIKLKIADFGFARFL 158
              P  I +K+ DFG AR L
Sbjct: 136 --MPNGI-IKLIDFGCARRL 152

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 45.5 bits (108), Expect = 2e-06
 Identities = 33/149 (22%), Positives = 54/149 (36%), Gaps = 57/149 (38%)

Query: 19  LTELHHENVVE-----LLHCKESDQHVYLVMEFCNGGDLADYLV----SKGTLSEDTIRI 69
           L  ++H N++      L   K     + +VME+   GDL+  +      +  + E  I  
Sbjct: 53  LASVNHPNIISYKEAFLDGNK-----LCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWR 107

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
              Q+++ L+A       HE                            +I+HRDLK  NI
Sbjct: 108 IFIQLLRGLQAL------HEQ---------------------------KILHRDLKSANI 134

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           LL            +  +KI D G ++ L
Sbjct: 135 LLV----------ANDLVKIGDLGISKVL 153

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 44/127 (34%)

Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           VV+L +  + D+++Y+VME+  GGDL + L+S   + E   R +  ++V AL A      
Sbjct: 105 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDAIH---- 159

Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                                M F         +HRD+KP N+LL  S            
Sbjct: 160 --------------------SMGF---------IHRDVKPDNMLLDKSG----------H 180

Query: 147 LKIADFG 153
           LK+ADFG
Sbjct: 181 LKLADFG 187

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 45.8 bits (108), Expect = 3e-06
 Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 43/136 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E  +E VV L +  +   ++Y VM++  GGD+   L+  G   ED  R ++ ++  A 
Sbjct: 55  LAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCA- 113

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                        VE +H           M F         +HRD+KP NIL+       
Sbjct: 114 -------------VESVH----------KMGF---------IHRDIKPDNILID------ 135

Query: 139 YPQPQHIKLKIADFGF 154
             +  HIKL   DFG 
Sbjct: 136 --RDGHIKL--TDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 45.7 bits (108), Expect = 3e-06
 Identities = 43/147 (29%), Positives = 59/147 (40%), Gaps = 51/147 (34%)

Query: 16  LKELTELHHENVVELLHCKESDQHV------YLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           L+ L  + HENV+ LL     D  +      YLVM F  G DL   L+    LSED I+ 
Sbjct: 65  LRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGK-LMKHEKLSEDRIQF 122

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            + Q+++ LK                                     A I+HRDLKP N+
Sbjct: 123 LVYQMLKGLKYIHA---------------------------------AGIIHRDLKPGNL 149

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFAR 156
            ++          +  +LKI DFG AR
Sbjct: 150 AVN----------EDCELKILDFGLAR 166

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 45.2 bits (107), Expect = 3e-06
 Identities = 40/146 (27%), Positives = 56/146 (38%), Gaps = 50/146 (34%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNG--GDLADYLVSKGTLSEDTIRI 69
           I+KE   L +L H N +E   C   +   +LVME+C G   D+ +  V K  L E  I  
Sbjct: 62  IIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLGSASDILE--VHKKPLQEVEIAA 119

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
                +Q L       LH        H +                     +HRD+K  NI
Sbjct: 120 ICHGALQGLAY-----LHS-------HER---------------------IHRDIKAGNI 146

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFA 155
           LL+          +   +K+ADFG A
Sbjct: 147 LLT----------EPGTVKLADFGSA 162

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 45.3 bits (107), Expect = 3e-06
 Identities = 43/156 (27%), Positives = 63/156 (40%), Gaps = 49/156 (31%)

Query: 5   SKSSIVLTRHILKELTELHHEN---VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT 61
           S+S +    H L E T L   N   +V L    +S + +YLV+ F NGG+L  +L  +G 
Sbjct: 33  SRSEVT---HTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGR 89

Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
                 R +  +++ AL     + LH  NV                            ++
Sbjct: 90  FDLSRARFYTAELLCAL-----ENLHKFNV----------------------------IY 116

Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF 157
           RDLKP+NILL +          HI L   DFG  + 
Sbjct: 117 RDLKPENILLDYQ--------GHIAL--CDFGLCKL 142

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 45.3 bits (107), Expect = 3e-06
 Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 50/142 (35%)

Query: 19  LTELHHENVVELL----HCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           +T+LHH+N+V LL    H       +Y+VME  + G+L ++L ++G          L  +
Sbjct: 53  MTKLHHKNLVRLLGVILH-----NGLYIVMELMSKGNLVNFLRTRGR--------ALVSV 99

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           +Q L+      L     +E L  K                   ++VHRDL  +NIL+S  
Sbjct: 100 IQLLQF----SLDVAEGMEYLESK-------------------KLVHRDLAARNILVS-- 134

Query: 135 FGKQYPQPQHIKLKIADFGFAR 156
                   +    K++DFG AR
Sbjct: 135 --------EDGVAKVSDFGLAR 148

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 45.2 bits (107), Expect = 4e-06
 Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 52/150 (34%)

Query: 15  ILKELT---ELHHENVVELLHC-----KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDT 66
           IL+E+     L H ++VE+ H      +   + +Y+V E     DL   + +   L+ + 
Sbjct: 46  ILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELM-ESDLHQVIKANDDLTPEH 104

Query: 67  IRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKP 126
            + FL Q+++ALK      +H  NV                             HRDLKP
Sbjct: 105 HQFFLYQLLRALKY-----IHTANVF----------------------------HRDLKP 131

Query: 127 QNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           +NIL +             KLKI DFG AR
Sbjct: 132 KNILAN----------ADCKLKICDFGLAR 151

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 44.9 bits (106), Expect = 4e-06
 Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 43/133 (32%)

Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H  + +L  C ++   ++ VMEF NGGDL  ++       E   R +  +I  AL     
Sbjct: 55  HPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALM---- 110

Query: 84  KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQ 143
                      LH K                    I++RDLK  N+LL H          
Sbjct: 111 ----------FLHDKG-------------------IIYRDLKLDNVLLDHE--------G 133

Query: 144 HIKLKIADFGFAR 156
           H KL  ADFG  +
Sbjct: 134 HCKL--ADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 38/139 (27%), Positives = 55/139 (39%), Gaps = 31/139 (22%)

Query: 19  LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQA 77
           LT   HEN+V+    C E D    +V E+   GDL  +L S G  +      FLK     
Sbjct: 62  LTNFQHENIVKFYGVCTEGDP-PIMVFEYMEHGDLNKFLRSHGPDAA-----FLKSPDSP 115

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           +    + +L    V      + +   VYL  +          VHRDL  +N L+ +    
Sbjct: 116 MGELTLSQLLQIAV------QIASGMVYLASQ--------HFVHRDLATRNCLVGYDL-- 159

Query: 138 QYPQPQHIKLKIADFGFAR 156
                    +KI DFG +R
Sbjct: 160 --------VVKIGDFGMSR 170

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 44.6 bits (105), Expect = 4e-06
 Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 45/155 (29%)

Query: 6   KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSED 65
           K+  +    ILK+ +   H N+V L+      Q +Y+VME   GGD   +L ++G     
Sbjct: 37  KAKFLQEARILKQYS---HPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGP---- 89

Query: 66  TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLK 125
             R+ +K+++Q +          EN    +         YL  + C        +HRDL 
Sbjct: 90  --RLKVKELIQMV----------ENAAAGME--------YLESKHC--------IHRDLA 121

Query: 126 PQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            +N L++          +   LKI+DFG +R  +D
Sbjct: 122 ARNCLVT----------EKNVLKISDFGMSREEED 146

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 45.0 bits (106), Expect = 4e-06
 Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 43/186 (23%)

Query: 2   ATQSKSSIVLTRHILKELTEL-HHENVVELL-HCKESDQHVYLVMEFCNGGDLADYLVSK 59
           AT S+   +++   LK L  + +H NVV LL  C + +  + +++EFC  G+L+++L +K
Sbjct: 49  ATASEHKALMSE--LKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAK 106

Query: 60  GTL------SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY-------- 105
                         R   + +V+  +  +  E    +V+       +             
Sbjct: 107 REFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166

Query: 106 ----LVME--FCNGGDLAR---------IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIA 150
               L ME   C    +AR          +HRDL  +NILLS +            +KI 
Sbjct: 167 WKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN----------VVKIC 216

Query: 151 DFGFAR 156
           DFG AR
Sbjct: 217 DFGLAR 222

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 44.8 bits (106), Expect = 4e-06
 Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 42/122 (34%)

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGG--------- 114
           EDT+R   +QI + ++   +++++H NVV+     + +  + +++EF +GG         
Sbjct: 112 EDTVR---RQICREIEI--LRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGTHIAD 166

Query: 115 -----DLAR-------------IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
                D+AR             IVHRD+KP N+L++    K         +KIADFG +R
Sbjct: 167 EQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINS--AKN--------VKIADFGVSR 216

Query: 157 FL 158
            L
Sbjct: 217 IL 218

Length = 353

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 44.8 bits (106), Expect = 5e-06
 Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 46/121 (38%)

Query: 35  ESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKELHHENVV 92
           + + ++YLVM++  GGDL   L+SK    L ED  R +L ++V A+ +  V +L +    
Sbjct: 71  QDENNLYLVMDYYVGGDLLT-LLSKFEDRLPEDMARFYLAEMVLAIDS--VHQLGY---- 123

Query: 93  ELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADF 152
                                      VHRD+KP N+LL  +         HI+L  ADF
Sbjct: 124 ---------------------------VHRDIKPDNVLLDKN--------GHIRL--ADF 146

Query: 153 G 153
           G
Sbjct: 147 G 147

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 44.6 bits (105), Expect = 5e-06
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 49/148 (33%)

Query: 15  ILKELTELHHENVVELLHC---KESDQHVYLVMEFCN-GGDLADYL--VSKGTLSEDTIR 68
           +L+ L    H NVV L        +D+   L + F +   DL  YL  V +  +  +TI+
Sbjct: 54  VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 113

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             + Q+++ L              + LH                     R+VHRDLKPQN
Sbjct: 114 DMMFQLLRGL--------------DFLHSH-------------------RVVHRDLKPQN 140

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           IL++ S           ++K+ADFG AR
Sbjct: 141 ILVTSSG----------QIKLADFGLAR 158

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 44.7 bits (106), Expect = 5e-06
 Identities = 41/150 (27%), Positives = 57/150 (38%), Gaps = 58/150 (38%)

Query: 16  LKELTELHHENVVELLHC------KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           L  +  ++H+N++ LL+        E  Q VYLVME  +                     
Sbjct: 66  LVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDAN------------------- 106

Query: 70  FLKQIVQALKAFQVKELHHENVVELLH---CKESDQHVYLVMEFCNGGDLARIVHRDLKP 126
            L Q++Q        +L HE +  LL+   C     H             A I+HRDLKP
Sbjct: 107 -LCQVIQ-------MDLDHERMSYLLYQMLCGIKHLH------------SAGIIHRDLKP 146

Query: 127 QNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
            NI++               LKI DFG AR
Sbjct: 147 SNIVVKSD----------CTLKILDFGLAR 166

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 44.3 bits (104), Expect = 6e-06
 Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 45/143 (31%)

Query: 19  LTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQ 76
           L  L HE +V+   C    +++ + + ME+  GG + D L + G L+E   R + +QI++
Sbjct: 58  LKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILE 117

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            +         H N+                           IVHRD+K  NI L  S G
Sbjct: 118 GMSYL------HSNM---------------------------IVHRDIKGANI-LRDSAG 143

Query: 137 KQYPQPQHIKLKIADFGFARFLQ 159
                     +K+ DFG ++ LQ
Sbjct: 144 ---------NVKLGDFGASKRLQ 157

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 44.3 bits (105), Expect = 6e-06
 Identities = 38/145 (26%), Positives = 56/145 (38%), Gaps = 50/145 (34%)

Query: 19  LTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQ 76
           L  L HEN+V+     E    + + L+ME+   G L DY      L     +I LK+++ 
Sbjct: 60  LRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDY------LQRHRDQINLKRLL- 112

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL---ARIVHRDLKPQNILLSH 133
            L + Q+                           C G D     R +HRDL  +NIL+  
Sbjct: 113 -LFSSQI---------------------------CKGMDYLGSQRYIHRDLAARNILVES 144

Query: 134 SFGKQYPQPQHIKLKIADFGFARFL 158
                      +  KI+DFG A+ L
Sbjct: 145 E--------DLV--KISDFGLAKVL 159

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 44.2 bits (104), Expect = 6e-06
 Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 46/145 (31%)

Query: 19  LTELHHENVVELLHCKE-SDQHVYLVMEFCNGGDLADYLV-SKGT-LSEDTIRIFLKQIV 75
           L++L H N+V      E  D  +Y+VM FC GGDL   L   KG  L E+ +  +  QI 
Sbjct: 53  LSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIA 112

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
            AL+      LH ++                            I+HRDLK QN+ L+ + 
Sbjct: 113 MALQY-----LHEKH----------------------------ILHRDLKTQNVFLTRT- 138

Query: 136 GKQYPQPQHIKLKIADFGFARFLQD 160
                   +I +K+ D G AR L++
Sbjct: 139 --------NI-IKVGDLGIARVLEN 154

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 44.3 bits (104), Expect = 8e-06
 Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 46/147 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           R IL E   L    VV++ +  +   ++YL+MEF  GGD+   L+ K TL+E+  + ++ 
Sbjct: 52  RDILVEADSLW---VVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIA 108

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           + V A+ +     +H                                +HRD+KP N+LL 
Sbjct: 109 ETVLAIDS-----IHQLG----------------------------FIHRDIKPDNLLLD 135

Query: 133 HSFGKQYPQPQHIKLKIADFGFARFLQ 159
                      H+KL  +DFG    L+
Sbjct: 136 SK--------GHVKL--SDFGLCTGLK 152

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 44.1 bits (104), Expect = 8e-06
 Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 40/147 (27%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           LKE   ++  +H N+V+LL     ++  Y++ME   GGDL  YL            + LK
Sbjct: 47  LKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLK 106

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGG---DLARIVHRDLKPQNI 129
           +++                              + ++   G    +    +HRDL  +N 
Sbjct: 107 ELLD-----------------------------ICLDVAKGCVYLEQMHFIHRDLAARNC 137

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFAR 156
           L+S    K Y   + +  KI DFG AR
Sbjct: 138 LVSE---KGYDADRVV--KIGDFGLAR 159

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 44.2 bits (104), Expect = 8e-06
 Identities = 51/183 (27%), Positives = 77/183 (42%), Gaps = 49/183 (26%)

Query: 13  RHILKELTEL----HHENVVELL-HCKESDQHVYLVMEFCNGGDLADYLVSK-------- 59
           R ++ EL  L    HH NVV LL  C +    + +++EFC  G+L++YL SK        
Sbjct: 55  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYK 114

Query: 60  --------GTLSEDTIRIFLKQIVQALKAFQ-------VKELHHENVVELLHCKESDQHV 104
                   G      I   LK+ + ++ + Q       V+E    +V E    +E     
Sbjct: 115 TKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKK 174

Query: 105 YLVME--FCNGGDLAR---------IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG 153
            L +E   C    +A+          +HRDL  +NILLS          ++  +KI DFG
Sbjct: 175 VLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS----------ENNVVKICDFG 224

Query: 154 FAR 156
            AR
Sbjct: 225 LAR 227

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 44.0 bits (104), Expect = 9e-06
 Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 55/152 (36%)

Query: 15  ILKELTELHHENVVELL---HCKESD--QHVYLVMEFCNGGDLADYLVSKG-----TLSE 64
           +L+ L+E  +  +V LL   H +E +    +YLV E+ +  DL  ++ S G      L  
Sbjct: 53  LLQMLSESIY--IVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPA 109

Query: 65  DTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDL 124
            TI+ F+ Q+++ +                 HC     H + VM            HRDL
Sbjct: 110 KTIKSFMYQLLKGVA----------------HC-----HKHGVM------------HRDL 136

Query: 125 KPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           KPQN+L+    G          LKIAD G  R
Sbjct: 137 KPQNLLVDKQKG---------LLKIADLGLGR 159

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 43.7 bits (103), Expect = 9e-06
 Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 42/142 (29%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +L H  +V L +   + + +Y++ E+   G L D+L +      + I++ + +++   
Sbjct: 55  MKQLQHPRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKT-----PEGIKLTINKLIDM- 107

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
            A Q+ E                      M F    +    +HRDL+  NIL+S +    
Sbjct: 108 -AAQIAE---------------------GMAFI---ERKNYIHRDLRAANILVSET---- 138

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
                 +  KIADFG AR ++D
Sbjct: 139 ------LCCKIADFGLARLIED 154

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 43.8 bits (103), Expect = 9e-06
 Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 42/117 (35%)

Query: 42  LVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESD 101
           LVME  +GG L  +L  K    +D I +                    NVVEL+H     
Sbjct: 71  LVMEMASGGPLNKFLSGK----KDEITV-------------------SNVVELMH----- 102

Query: 102 QHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
             V + M++  G +    VHRDL  +N+LL +   + Y        KI+DFG ++ L
Sbjct: 103 -QVSMGMKYLEGKNF---VHRDLAARNVLLVN---QHYA-------KISDFGLSKAL 145

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 39/145 (26%), Positives = 60/145 (41%), Gaps = 43/145 (29%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           LK L  L  EN+VEL         +YLV E+     L         +  + +R ++ Q++
Sbjct: 51  LKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLI 110

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           +A+                               +C+  D   IVHRD+KP+N+L+SH+ 
Sbjct: 111 KAI------------------------------HWCHKND---IVHRDIKPENLLISHN- 136

Query: 136 GKQYPQPQHIKLKIADFGFARFLQD 160
                      LK+ DFGFAR L +
Sbjct: 137 ---------DVLKLCDFGFARNLSE 152

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 43.8 bits (103), Expect = 1e-05
 Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 33/137 (24%)

Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
           HH N++ LL   E   ++YL +E+   G+L D+L     L  D              AF 
Sbjct: 66  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETD-------------PAFA 112

Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDL---ARIVHRDLKPQNILLSHSFGKQY 139
           +    +     L     S Q ++   +   G D     + +HRDL  +NIL+  ++    
Sbjct: 113 IA---NSTASTL----SSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY---- 161

Query: 140 PQPQHIKLKIADFGFAR 156
                   KIADFG +R
Sbjct: 162 ------VAKIADFGLSR 172

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 43.6 bits (103), Expect = 1e-05
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 27/138 (19%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           +++L H N+V LL     +Q   ++ E+   GDL ++LV     S+       + +  +L
Sbjct: 62  MSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSL 121

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                         + LH       +   ME+ +       VHRDL  +N L+       
Sbjct: 122 DC-----------SDFLHIA---IQIAAGMEYLSS---HHFVHRDLAARNCLVG------ 158

Query: 139 YPQPQHIKLKIADFGFAR 156
               + + +KI+DFG +R
Sbjct: 159 ----EGLTVKISDFGLSR 172

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 45/149 (30%)

Query: 11  LTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTI 67
           L R  L+E   L +  H N+V+L+      Q +Y+VME   GG L  +L  K   +  T+
Sbjct: 35  LKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKK--NRLTV 92

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
           +  L+  + A                           YL  + C        +HRDL  +
Sbjct: 93  KKLLQMSLDAAAGM----------------------EYLESKNC--------IHRDLAAR 122

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           N L+            ++ LKI+DFG +R
Sbjct: 123 NCLVGE---------NNV-LKISDFGMSR 141

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 43.3 bits (102), Expect = 1e-05
 Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 50/189 (26%)

Query: 2   ATQSKSSIVLTRHILKELTEL-HHENVVELL-HCKESDQHVYLVMEFCNGGDLADYLVSK 59
           AT S+   ++T   LK L  + HH NVV LL  C +    + +++E+C  G+L++YL SK
Sbjct: 49  ATASEYKALMTE--LKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSK 106

Query: 60  -----GTLSEDT-IRIFLKQIVQALKAFQV---------------KELHHENVVELLHCK 98
                   ++ T  R   ++  +  +   V                    E   E     
Sbjct: 107 RECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVE---EDEEGD 163

Query: 99  ESDQHVYLVME--FCNGGDLAR---------IVHRDLKPQNILLSHSFGKQYPQPQHIKL 147
           E  +   L +E        +AR          +HRDL  +NILLS          ++  +
Sbjct: 164 ELYKE-PLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS----------ENNVV 212

Query: 148 KIADFGFAR 156
           KI DFG AR
Sbjct: 213 KICDFGLAR 221

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 43.3 bits (103), Expect = 1e-05
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 14/104 (13%)

Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
            + N ++L +   + +   L+M++   GDL D L  +G LSE  ++  ++Q+V+AL    
Sbjct: 67  DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLH 126

Query: 83  VKELHH-----ENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
              + H     ENV+       +   +YL    C+ G L +I+ 
Sbjct: 127 KHNIIHNDIKLENVL----YDRAKDRIYL----CDYG-LCKIIG 161

Length = 267

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 43.2 bits (102), Expect = 1e-05
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 43/130 (33%)

Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           +V L +  ++D  ++L++++ NGG+L  +L  +   +E  +R+++ +IV AL       L
Sbjct: 67  LVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLAL-----DHL 121

Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
           H                               I++RD+K +NILL            H+ 
Sbjct: 122 HQ----------------------------LGIIYRDIKLENILLD--------SEGHVV 145

Query: 147 LKIADFGFAR 156
           L   DFG ++
Sbjct: 146 L--TDFGLSK 153

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 46/143 (32%)

Query: 16  LKELTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
           +  L  L+HEN+V+   C  ++  + + L+ME+   G L DYL  K  L+   + +F +Q
Sbjct: 57  INILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYL-PKHKLNLAQLLLFAQQ 115

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           I + +                LH +                     +HRDL  +N+LL +
Sbjct: 116 ICEGM--------------AYLHSQ-------------------HYIHRDLAARNVLLDN 142

Query: 134 SFGKQYPQPQHIKLKIADFGFAR 156
                        +KI DFG A+
Sbjct: 143 DR----------LVKIGDFGLAK 155

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 43/140 (30%)

Query: 22  LHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA 80
           L H+ +V+L   C E +  +Y+V E+ + G L D+L S      +  ++ L Q+V    A
Sbjct: 58  LRHDKLVQLYAVCSEEEP-IYIVTEYMSKGSLLDFLKS-----GEGKKLRLPQLVDM--A 109

Query: 81  FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYP 140
            Q+ E                      M +    +    +HRDL  +NIL+         
Sbjct: 110 AQIAE---------------------GMAYL---ESRNYIHRDLAARNILVG-------- 137

Query: 141 QPQHIKLKIADFGFARFLQD 160
             +++  KIADFG AR ++D
Sbjct: 138 --ENLVCKIADFGLARLIED 155

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 37/142 (26%)

Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     +  +Y+++E+   G+L ++L ++     D               F +
Sbjct: 77  HKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDY-------------TFDI 123

Query: 84  KELHHENVV--ELLHCKESDQHVYLV---MEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
            ++  E +   +L+ C       Y V   ME+       R +HRDL  +N+L++      
Sbjct: 124 TKVPEEQLSFKDLVSC------AYQVARGMEYLES---RRCIHRDLAARNVLVT------ 168

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
               +   +KIADFG AR + D
Sbjct: 169 ----EDNVMKIADFGLARGVHD 186

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 42.9 bits (101), Expect = 2e-05
 Identities = 35/139 (25%), Positives = 53/139 (38%), Gaps = 45/139 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKQIVQ 76
           L ++    +V L +  E+   + LVM   NGGDL  ++ + G     E     +  QI+ 
Sbjct: 47  LEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIIC 106

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L     + LH                              RIV+RDLKP+N+LL     
Sbjct: 107 GL-----EHLHQR----------------------------RIVYRDLKPENVLLD---- 129

Query: 137 KQYPQPQHIKLKIADFGFA 155
                  H  ++I+D G A
Sbjct: 130 ------DHGNVRISDLGLA 142

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 44/138 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDL-ADYLVSKGTLSEDTIRIFLKQIVQA 77
           L    H N+V+LL     + ++++++EFC GG + A  L  +  L+E  IR+  KQ ++A
Sbjct: 56  LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEA 115

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L         HEN                           +I+HRDLK  NIL +     
Sbjct: 116 LNYL------HEN---------------------------KIIHRDLKAGNILFTLDG-- 140

Query: 138 QYPQPQHIKLKIADFGFA 155
                    +K+ADFG +
Sbjct: 141 --------DIKLADFGVS 150

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 38/161 (23%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-----VS 58
           +S    R +L E   L +++H +V++L      D  + L++E+   G L  +L     V 
Sbjct: 42  ASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVG 101

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD-LA 117
              L  D  R          +A  + +L                 +    +   G   LA
Sbjct: 102 PSYLGSDGNRNSSYLDNPDERALTMGDL-----------------ISFAWQISRGMQYLA 144

Query: 118 --RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
             ++VHRDL  +N+L++   G+        K+KI+DFG +R
Sbjct: 145 EMKLVHRDLAARNVLVAE--GR--------KMKISDFGLSR 175

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 45/159 (28%), Positives = 66/159 (41%), Gaps = 51/159 (32%)

Query: 6   KSSIVLTR----HILKE----LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV 57
           +  IVL R    HI+ E    L  + H  +V L +  ++ + +Y V++F NGG+L  +L 
Sbjct: 29  QKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQ 88

Query: 58  SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
            + +  E   R +  +I  AL       LH  N                           
Sbjct: 89  RERSFPEPRARFYAAEIASALGY-----LHSIN--------------------------- 116

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
            IV+RDLKP+NILL  S G       H+ L   DFG  +
Sbjct: 117 -IVYRDLKPENILLD-SQG-------HVVL--TDFGLCK 144

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 42.5 bits (100), Expect = 2e-05
 Identities = 44/160 (27%), Positives = 65/160 (40%), Gaps = 56/160 (35%)

Query: 9   IVLTRHILKELTELHHENVVEL----------LHCKESDQHVYLVMEFCNGGDLADYLVS 58
           I   R I K L +L+H N+V L          L  K+     YLV E+ +  DL   L S
Sbjct: 51  ITAIREI-KILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLES 108

Query: 59  K-GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
                SED I+ F+KQ+++ L                 +C + +                
Sbjct: 109 GLVHFSEDHIKSFMKQLLEGLN----------------YCHKKN---------------- 136

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF 157
             +HRD+K  NILL++            ++K+ADFG AR 
Sbjct: 137 -FLHRDIKCSNILLNNKG----------QIKLADFGLARL 165

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 49/119 (41%)

Query: 72  KQIVQALKAFQVKELHHENVVEL--LHCKESDQHVYLVMEFCNGGDL------------- 116
           KQI++ L+    K      +V+       ES   + + ME+C GG L             
Sbjct: 44  KQILRELEI--NKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGR 101

Query: 117 ----------------------ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG 153
                                  +I+HRD+KP NILL+        + Q   +K+ DFG
Sbjct: 102 IGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR-------KGQ---VKLCDFG 150

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 42.3 bits (99), Expect = 3e-05
 Identities = 38/143 (26%), Positives = 56/143 (39%), Gaps = 45/143 (31%)

Query: 19  LTELHHENVVELLHCKESDQH--VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQ 76
           L  L HE +V+   C        + + ME   GG + D L S G L+E+  R + +QI++
Sbjct: 58  LKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILE 117

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            +         H N+                           IVHRD+K  NI L  S G
Sbjct: 118 GVSYL------HSNM---------------------------IVHRDIKGANI-LRDSVG 143

Query: 137 KQYPQPQHIKLKIADFGFARFLQ 159
                     +K+ DFG ++ LQ
Sbjct: 144 ---------NVKLGDFGASKRLQ 157

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 42.3 bits (99), Expect = 3e-05
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 45/143 (31%)

Query: 19  LTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQ 76
           L  L H+ +V+   C     ++ + + +E+  GG + D L + G L+E+  R + +QI+Q
Sbjct: 58  LKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQ 117

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            +         H N+                           IVHRD+K  NIL   +  
Sbjct: 118 GVSYL------HSNM---------------------------IVHRDIKGANILRDSAG- 143

Query: 137 KQYPQPQHIKLKIADFGFARFLQ 159
                     +K+ DFG ++ +Q
Sbjct: 144 ---------NVKLGDFGASKRIQ 157

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 42.2 bits (99), Expect = 4e-05
 Identities = 41/156 (26%), Positives = 67/156 (42%), Gaps = 43/156 (27%)

Query: 1   VATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG 60
           VA +  +  +  R+IL          +V L    ++D  +YLV ++ +GG+L  +L  +G
Sbjct: 32  VAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEG 91

Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
             SED  + ++ ++V AL+      LH  +                            IV
Sbjct: 92  RFSEDRAKFYIAELVLALE-----HLHKYD----------------------------IV 118

Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           +RDLKP+NILL  +         HI L   DFG ++
Sbjct: 119 YRDLKPENILLDAT--------GHIAL--CDFGLSK 144

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 42.4 bits (99), Expect = 4e-05
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 44/128 (34%)

Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKE 85
           +  L +  + + ++YLVM++  GGDL   L   +  L ED  R +L ++V A+ +  V +
Sbjct: 63  ITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDS--VHQ 120

Query: 86  LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHI 145
           LH+                               VHRD+KP NIL+  +         HI
Sbjct: 121 LHY-------------------------------VHRDIKPDNILMDMN--------GHI 141

Query: 146 KLKIADFG 153
           +L  ADFG
Sbjct: 142 RL--ADFG 147

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 42.1 bits (99), Expect = 4e-05
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 26/124 (20%)

Query: 13  RHILKELTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
           R  L    +L H+NVV LL  C+E++ H Y+++E+ + GDL  +L +  +  E       
Sbjct: 56  RRELDMFRKLSHKNVVRLLGLCREAEPH-YMILEYTDLGDLKQFLRATKSKDEKL----- 109

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
                     +   L  +  V L         + L M+  +    AR VHRDL  +N L+
Sbjct: 110 ----------KPPPLSTKQKVALCTQ------IALGMDHLSN---ARFVHRDLAARNCLV 150

Query: 132 SHSF 135
           S   
Sbjct: 151 SSQR 154

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 41.8 bits (98), Expect = 4e-05
 Identities = 34/136 (25%), Positives = 53/136 (38%), Gaps = 44/136 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + E  H N+V  L        +++VME+  GG L D +V++  + E  I    ++ +QAL
Sbjct: 70  MRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQAL 128

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                         E LH  +                   ++HRD+K  NILL       
Sbjct: 129 --------------EFLHSNQ-------------------VIHRDIKSDNILLGMDG--- 152

Query: 139 YPQPQHIKLKIADFGF 154
                   +K+ DFGF
Sbjct: 153 -------SVKLTDFGF 161

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 41.9 bits (98), Expect = 4e-05
 Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 53/163 (32%)

Query: 1   VATQSKSSIVLTRHILKELTELHHENVVELL--HCKES----DQHVYLVMEFCNGGDLAD 54
           V    +  I L  ++LK+ +  HH N+        K+S    D  ++LVMEFC  G + D
Sbjct: 51  VTEDEEEEIKLEINMLKKYS--HHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTD 108

Query: 55  YLV-SKG-TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCN 112
            +  +KG  L ED I    ++I++ L        H                         
Sbjct: 109 LVKNTKGNALKEDWIAYICREILRGLAHLHA---HK------------------------ 141

Query: 113 GGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
                 ++HRD+K QN+LL+          ++ ++K+ DFG +
Sbjct: 142 ------VIHRDIKGQNVLLT----------ENAEVKLVDFGVS 168

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 42.0 bits (98), Expect = 4e-05
 Identities = 40/142 (28%), Positives = 64/142 (45%), Gaps = 51/142 (35%)

Query: 19  LTELHHENVV---ELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQI 74
           L  L H N+V   +++H KE+   + LV E+ +  DL  Y+    G L  + +++FL Q+
Sbjct: 57  LKGLKHANIVLLHDIIHTKET---LTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQL 112

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           ++ L                          Y+   +        I+HRDLKPQN+L+S +
Sbjct: 113 LRGLS-------------------------YIHQRY--------ILHRDLKPQNLLISDT 139

Query: 135 FGKQYPQPQHIKLKIADFGFAR 156
                      +LK+ADFG AR
Sbjct: 140 G----------ELKLADFGLAR 151

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 41.9 bits (98), Expect = 5e-05
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 44/128 (34%)

Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKE 85
           +  L +  + + ++YLVM++  GGDL   L   +  L ED  R ++ ++V A+ +  + +
Sbjct: 63  ITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHS--IHQ 120

Query: 86  LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHI 145
           LH+                               VHRD+KP N+LL  +         HI
Sbjct: 121 LHY-------------------------------VHRDIKPDNVLLDMN--------GHI 141

Query: 146 KLKIADFG 153
           +L  ADFG
Sbjct: 142 RL--ADFG 147

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 41.6 bits (97), Expect = 5e-05
 Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 43/135 (31%)

Query: 21  ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA 80
           E  H N+V       S + +++ ME+C GG L D     G LSE  I    ++ +Q L  
Sbjct: 62  ECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLA- 120

Query: 81  FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYP 140
                         LH K                     +HRD+K  NILL+        
Sbjct: 121 -------------YLHSKGK-------------------MHRDIKGANILLT-------- 140

Query: 141 QPQHIKLKIADFGFA 155
              +  +K+ADFG A
Sbjct: 141 --DNGDVKLADFGVA 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 41.6 bits (97), Expect = 5e-05
 Identities = 36/136 (26%), Positives = 62/136 (45%), Gaps = 44/136 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + + HHENVV++ +       +++VMEF  GG L D +V+   ++E+ I      +++AL
Sbjct: 73  MRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRAL 131

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH++ V                            +HRD+K  +ILL+ S G  
Sbjct: 132 SY-----LHNQGV----------------------------IHRDIKSDSILLT-SDG-- 155

Query: 139 YPQPQHIKLKIADFGF 154
                  ++K++DFGF
Sbjct: 156 -------RIKLSDFGF 164

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 41.6 bits (98), Expect = 5e-05
 Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 52/158 (32%)

Query: 7   SSIVLTRHILKELTELH----HENVVEL--LHCKESDQH--VYLVMEFCNGGDLADYLVS 58
           S  +L +  L+EL  L     H+N+  L  +          +YL  E     DL   + S
Sbjct: 40  SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELMEA-DLHQIIRS 98

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
              L++   + F+ QI+  LK      +H  NV                           
Sbjct: 99  GQPLTDAHFQSFIYQILCGLKY-----IHSANV--------------------------- 126

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
            +HRDLKP N+L++             +LKI DFG AR
Sbjct: 127 -LHRDLKPGNLLVN----------ADCELKICDFGLAR 153

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 41.6 bits (97), Expect = 6e-05
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 44/136 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +  H+NVVE+       + ++++MEF  GG L D +VS+  L+E+ I    + ++QAL
Sbjct: 72  MRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQTRLNEEQIATVCESVLQAL 130

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH + V                            +HRD+K  +ILL+      
Sbjct: 131 CY-----LHSQGV----------------------------IHRDIKSDSILLTLDG--- 154

Query: 139 YPQPQHIKLKIADFGF 154
                  ++K++DFGF
Sbjct: 155 -------RVKLSDFGF 163

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 41.3 bits (97), Expect = 6e-05
 Identities = 28/119 (23%), Positives = 43/119 (36%), Gaps = 48/119 (40%)

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL------------------ 116
           VQALK      L H++++ L       + VY++ E    G L                  
Sbjct: 53  VQALK-----RLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLI 107

Query: 117 ---------------ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
                             +HRDL  +NIL+    G+          K+ADFG AR +++
Sbjct: 108 DMACQVAEGMAYLEEQNSIHRDLAARNILV----GEDL------VCKVADFGLARLIKE 156

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 41.2 bits (96), Expect = 7e-05
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 44/136 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDL-ADYLVSKGTLSEDTIRIFLKQIVQA 77
           L   +H  +V+LL     D  +++++EFC GG + A  L     L+E  I++  +Q+++A
Sbjct: 63  LATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEA 122

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L              + LH                     +I+HRDLK  N+LL+     
Sbjct: 123 L--------------QYLHSM-------------------KIIHRDLKAGNVLLT----- 144

Query: 138 QYPQPQHIKLKIADFG 153
                    +K+ADFG
Sbjct: 145 -----LDGDIKLADFG 155

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 33/144 (22%), Positives = 55/144 (38%), Gaps = 45/144 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQ 76
           +  L H+ +V L      ++ +Y++ E+   G L D+L S   G +    +  F  QI +
Sbjct: 55  MKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 114

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            +   + K                                   +HRDL+  N+L+S S  
Sbjct: 115 GMAYIERKNY---------------------------------IHRDLRAANVLVSES-- 139

Query: 137 KQYPQPQHIKLKIADFGFARFLQD 160
                   +  KIADFG AR ++D
Sbjct: 140 --------LMCKIADFGLARVIED 155

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 45/139 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQA 77
           L +L H N+V L     +++ + LV E+ +  DL  YL   G   +   +++FL Q+++ 
Sbjct: 58  LKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRG 116

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L                 +C                    +++HRDLKPQN+L++     
Sbjct: 117 LN----------------YCHRR-----------------KVLHRDLKPQNLLIN----- 138

Query: 138 QYPQPQHIKLKIADFGFAR 156
                +  +LK+ADFG AR
Sbjct: 139 -----ERGELKLADFGLAR 152

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 44/139 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQ-A 77
           L +  H N+V+L+      Q +Y+VME   GGD   +L  K    +D ++   KQ+V+ A
Sbjct: 46  LKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKK----KDELK--TKQLVKFA 99

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L A                   +    YL  + C        +HRDL  +N L+  +   
Sbjct: 100 LDA-------------------AAGMAYLESKNC--------IHRDLAARNCLVGENN-- 130

Query: 138 QYPQPQHIKLKIADFGFAR 156
                    LKI+DFG +R
Sbjct: 131 --------VLKISDFGMSR 141

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 31/134 (23%), Positives = 52/134 (38%), Gaps = 27/134 (20%)

Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
           HH N++ LL   E   ++YL +E+   G+L D+L     L  D            L + Q
Sbjct: 54  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 113

Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQP 142
           +     +    + +  +                  + +HRDL  +NIL+  ++       
Sbjct: 114 LLHFAADVARGMDYLSQK-----------------QFIHRDLAARNILVGENYVA----- 151

Query: 143 QHIKLKIADFGFAR 156
                KIADFG +R
Sbjct: 152 -----KIADFGLSR 160

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 40.5 bits (94), Expect = 1e-04
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 45/121 (37%)

Query: 37  DQHVYLVMEFCNGGDLADYLV-SKG-TLSEDTIRIFLKQIVQALKAFQVKELHHENVVEL 94
           D  ++LVMEFC  G + D +  +KG TL E+ I    ++I++ L       LH       
Sbjct: 81  DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL-----SHLH------- 128

Query: 95  LHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGF 154
                  QH              +++HRD+K QN+LL+          ++ ++K+ DFG 
Sbjct: 129 -------QH--------------KVIHRDIKGQNVLLT----------ENAEVKLVDFGV 157

Query: 155 A 155
           +
Sbjct: 158 S 158

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 44/124 (35%)

Query: 37  DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLH 96
           D  ++++ME+  GG   D L+  G L E  I   L++I++ L       LH E       
Sbjct: 74  DTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDY-----LHSE------- 120

Query: 97  CKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
                                + +HRD+K  N+LLS          +H ++K+ADFG A 
Sbjct: 121 ---------------------KKIHRDIKAANVLLS----------EHGEVKLADFGVAG 149

Query: 157 FLQD 160
            L D
Sbjct: 150 QLTD 153

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 40.4 bits (94), Expect = 2e-04
 Identities = 35/136 (25%), Positives = 54/136 (39%), Gaps = 43/136 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E  +E VV+L +  +   ++Y VM++  GGD+   L+      E   R ++ ++  A 
Sbjct: 55  LAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLA- 113

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                        +E +H           M F         +HRD+KP NIL+       
Sbjct: 114 -------------IESVH----------KMGF---------IHRDIKPDNILIDLD---- 137

Query: 139 YPQPQHIKLKIADFGF 154
                HIKL   DFG 
Sbjct: 138 ----GHIKL--TDFGL 147

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 41/166 (24%), Positives = 59/166 (35%), Gaps = 52/166 (31%)

Query: 1   VATQSKSSIVLTRHI---LKELTELH---HENVVELLHCKESDQHVYLVMEFCNGGDLAD 54
           VA +   S  L+  +   LKE   +H   HEN++ L +       + +V E    G L D
Sbjct: 26  VAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRL-YGVVLTHPLMMVTELAPLGSLLD 84

Query: 55  YL--VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCN 112
            L   + G     T+  +  QI   ++                         YL  +   
Sbjct: 85  RLRKDALGHFLISTLCDYAVQIANGMR-------------------------YLESK--- 116

Query: 113 GGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
                R +HRDL  +NILL              K+KI DFG  R L
Sbjct: 117 -----RFIHRDLAARNILL---ASDD-------KVKIGDFGLMRAL 147

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 35/151 (23%), Positives = 61/151 (40%), Gaps = 46/151 (30%)

Query: 4   QSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLS 63
           Q K  +++   ++  + EL + N+V  L        +++VME+  GG L D +V++  + 
Sbjct: 57  QPKKELIINEILV--MKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTD-VVTETCMD 113

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
           E  I    ++ +QAL              E LH  +                   ++HRD
Sbjct: 114 EAQIAAVCRECLQAL--------------EFLHANQ-------------------VIHRD 140

Query: 124 LKPQNILLSHSFGKQYPQPQHIKLKIADFGF 154
           +K  N+LL               +K+ DFGF
Sbjct: 141 IKSDNVLLG----------MDGSVKLTDFGF 161

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 40.1 bits (93), Expect = 2e-04
 Identities = 39/146 (26%), Positives = 58/146 (39%), Gaps = 46/146 (31%)

Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L    H  +  L +  ++   +  VME+ NGG+L  +L  +   SED  R +
Sbjct: 41  HTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFY 100

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             +IV AL              + LH                     +IV+RDLK +N++
Sbjct: 101 GAEIVSAL--------------DYLHS-------------------GKIVYRDLKLENLM 127

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           L         +  HI  KI DFG  +
Sbjct: 128 LD--------KDGHI--KITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 46/141 (32%)

Query: 19  LTELHHENVVELLHC-KESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIV 75
           +T+L H N+V+LL    E    +Y+V E+   G L DYL S+G   L  D +  F   + 
Sbjct: 53  MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 112

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           +A                              ME+    +    VHRDL  +N+L+S   
Sbjct: 113 EA------------------------------MEYLEANNF---VHRDLAARNVLVSE-- 137

Query: 136 GKQYPQPQHIKLKIADFGFAR 156
                   ++  K++DFG  +
Sbjct: 138 -------DNVA-KVSDFGLTK 150

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 26/138 (18%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + ELHH N+V LL     +Q V ++ E+ N GDL ++L+ +   S+          V++ 
Sbjct: 61  MAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKS- 119

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  L H + + +   + +    YL   F         VH+DL  +NIL+       
Sbjct: 120 ------SLDHGDFLHIA-IQIAAGMEYLSSHF--------FVHKDLAARNILIG------ 158

Query: 139 YPQPQHIKLKIADFGFAR 156
               + + +KI+D G +R
Sbjct: 159 ----EQLHVKISDLGLSR 172

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 42/151 (27%), Positives = 61/151 (40%), Gaps = 51/151 (33%)

Query: 16  LKELTELHHENVVELL------HCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           L+ L  + HENV+ LL         E    VYLV     G DL + +V    L++D ++ 
Sbjct: 67  LRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNN-IVKCQKLTDDHVQF 124

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            + QI++ LK               +H                    A I+HRDLKP N+
Sbjct: 125 LIYQILRGLK--------------YIHS-------------------ADIIHRDLKPSNL 151

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            ++          +  +LKI DFG AR   D
Sbjct: 152 AVN----------EDCELKILDFGLARHTDD 172

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 53/134 (39%)

Query: 60  GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL--- 116
           GT+S +    FL++      A  +K+L HE +V+L +   S++ +Y+V E+ + G L   
Sbjct: 41  GTMSPEA---FLQE------AQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDF 90

Query: 117 ------------------ARI------------VHRDLKPQNILLSHSFGKQYPQPQHIK 146
                             A+I            VHRDL+  NIL+           +++ 
Sbjct: 91  LKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG----------ENLV 140

Query: 147 LKIADFGFARFLQD 160
            K+ADFG AR ++D
Sbjct: 141 CKVADFGLARLIED 154

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 39.7 bits (93), Expect = 3e-04
 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 33/133 (24%)

Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N+V L+         ++++E   GGDL  +L       E    + +K           
Sbjct: 68  HQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMK----------- 116

Query: 84  KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQ 143
                    +LL C         V + C   +    +HRD+  +N LL+         P 
Sbjct: 117 ---------DLLFCARD------VAKGCKYLEENHFIHRDIAARNCLLTC------KGPG 155

Query: 144 HIKLKIADFGFAR 156
            +  KIADFG AR
Sbjct: 156 RV-AKIADFGMAR 167

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 39.6 bits (92), Expect = 3e-04
 Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 35/128 (27%)

Query: 4   QSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLS 63
           + ++ I+  R++L  L  L H  +V L +  ++ + +Y V+++ NGG+L  +L  +    
Sbjct: 37  KEQNHIMAERNVL--LKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFL 94

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
           E   R +  ++  A+       LH  N                            I++RD
Sbjct: 95  EPRARFYAAEVASAIGY-----LHSLN----------------------------IIYRD 121

Query: 124 LKPQNILL 131
           LKP+NILL
Sbjct: 122 LKPENILL 129

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 50/148 (33%)

Query: 13  RHILKELTELHHEN---VVELLHCKESDQHVYLVMEFCNGGDLADYL----VSKGTLSED 65
             I+ EL  LH      +V+       +  VY+ ME+ + G L D L    V+   + ED
Sbjct: 44  NQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSL-DKLYAGGVATEGIPED 102

Query: 66  TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLK 125
            +R     +V+ LK   +KE H+                              I+HRD+K
Sbjct: 103 VLRRITYAVVKGLK--FLKEEHN------------------------------IIHRDVK 130

Query: 126 PQNILLSHSFGKQYPQPQHIKLKIADFG 153
           P N+L++   G         ++K+ DFG
Sbjct: 131 PTNVLVN-GNG---------QVKLCDFG 148

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 39.2 bits (91), Expect = 3e-04
 Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 48/148 (32%)

Query: 14  HILKELTELHHENVVELL------HCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTI 67
           +ILK L++  H NVV+          K  DQ ++LV+E CNGG + D  + KG L     
Sbjct: 66  NILKALSD--HPNVVKFYGMYYKKDVKNGDQ-LWLVLELCNGGSVTD--LVKGFLKRG-- 118

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
               +++ + + A+    + HE ++ L H   +                 + +HRD+K  
Sbjct: 119 ----ERMEEPIIAY----ILHEALMGLQHLHVN-----------------KTIHRDVKGN 153

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFA 155
           NILL+   G          +K+ DFG +
Sbjct: 154 NILLTTEGG----------VKLVDFGVS 171

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 39.4 bits (92), Expect = 3e-04
 Identities = 34/156 (21%), Positives = 60/156 (38%), Gaps = 47/156 (30%)

Query: 1   VATQSKSSIVLTRHILKELTELHH---ENVVELLHCKESDQHVYLVMEFCNGGDLADYLV 57
           V   +KSS  + + IL+EL  +H      +V       ++ ++ + MEF + G L     
Sbjct: 38  VHIGAKSS--VRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYK 95

Query: 58  SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
             G +  + +      +V+ L                          YL        ++ 
Sbjct: 96  KGGPIPVEILGKIAVAVVEGL-------------------------TYLY-------NVH 123

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG 153
           RI+HRD+KP NIL++             ++K+ DFG
Sbjct: 124 RIMHRDIKPSNILVN----------SRGQIKLCDFG 149

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 42/142 (29%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +L H+ +V L +   S++ +Y+V EF   G L D+L  +G    D   + L Q+V   
Sbjct: 55  MKKLRHDKLVPL-YAVVSEEPIYIVTEFMGKGSLLDFL-KEG----DGKYLKLPQLVDM- 107

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
            A Q+                +D   Y+        +    +HRDL+  NIL+       
Sbjct: 108 -AAQI----------------ADGMAYI--------ERMNYIHRDLRAANILVG------ 136

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
                ++  KIADFG AR ++D
Sbjct: 137 ----DNLVCKIADFGLARLIED 154

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 37/125 (29%)

Query: 13  RHILKE----LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIR 68
           +HI+ E    L  + H  +V L +  ++   +Y V+++ NGG+L  +L  + +  E   R
Sbjct: 40  KHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRAR 99

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
            +  +I  AL       LH  N                            I++RDLKP+N
Sbjct: 100 FYAAEIASALGY-----LHSLN----------------------------IIYRDLKPEN 126

Query: 129 ILLSH 133
           ILL  
Sbjct: 127 ILLDS 131

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 39.0 bits (91), Expect = 4e-04
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 44/145 (30%)

Query: 17  KELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKQIV 75
           K + +L H N+V+L       + +++V E+   G L +YL   KG L  + +      + 
Sbjct: 51  KVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVC 110

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           +A++                         YL        +    +HRDL  +N L+    
Sbjct: 111 EAME-------------------------YL--------ESNGFIHRDLAARNCLVGEDN 137

Query: 136 GKQYPQPQHIKLKIADFGFARFLQD 160
                      +K++DFG AR++ D
Sbjct: 138 ----------VVKVSDFGLARYVLD 152

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 38.9 bits (90), Expect = 4e-04
 Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 35/137 (25%)

Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     D  +Y+++E+ + G+L +YL ++     +              ++ +
Sbjct: 80  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-------------SYDI 126

Query: 84  KELHHENVV--ELLHC--KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
             +  E +   +L+ C  + +    YL  + C        +HRDL  +N+L++ +     
Sbjct: 127 ARVPDEQMTFKDLVSCTYQVARGMEYLASQKC--------IHRDLAARNVLVTENN---- 174

Query: 140 PQPQHIKLKIADFGFAR 156
                  +KIADFG AR
Sbjct: 175 ------VMKIADFGLAR 185

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 50/147 (34%)

Query: 19  LTELHHENVVEL--LHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQ 76
           L  L+HEN+V+   +  ++    + L+MEF   G L +YL        +  +I LKQ   
Sbjct: 60  LRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL------PRNKNKINLKQ--- 110

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL---ARIVHRDLKPQNILLSH 133
                                    Q  Y V + C G D     + VHRDL  +N+L+  
Sbjct: 111 -------------------------QLKYAV-QICKGMDYLGSRQYVHRDLAARNVLV-- 142

Query: 134 SFGKQYPQPQHIKLKIADFGFARFLQD 160
                  + +H  +KI DFG  + ++ 
Sbjct: 143 -------ESEHQ-VKIGDFGLTKAIET 161

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 38.8 bits (91), Expect = 5e-04
 Identities = 36/146 (24%), Positives = 57/146 (39%), Gaps = 54/146 (36%)

Query: 16  LKELTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYLVSKGT---LSEDTIRIF 70
           L+ L+   H N++ L+          + LV E     D+  Y + KG    L E  ++ +
Sbjct: 51  LRRLS--PHPNILRLIEVLFDRKTGRLALVFELM---DMNLYELIKGRKRPLPEKRVKSY 105

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
           + Q++++L       +H                        NG     I HRD+KP+NIL
Sbjct: 106 MYQLLKSLD-----HMHR-----------------------NG-----IFHRDIKPENIL 132

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +     K         LK+ADFG  R
Sbjct: 133 I-----KDD------ILKLADFGSCR 147

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 35/146 (23%), Positives = 59/146 (40%), Gaps = 46/146 (31%)

Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H + E   L    H  +  L +  ++   +  VME+ NGG+L  +L  +   +E+  R +
Sbjct: 41  HTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 100

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             +IV AL              E LH ++                   +V+RD+K +N++
Sbjct: 101 GAEIVSAL--------------EYLHSRD-------------------VVYRDIKLENLM 127

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           L         +  HI  KI DFG  +
Sbjct: 128 LD--------KDGHI--KITDFGLCK 143

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 36/149 (24%), Positives = 57/149 (38%), Gaps = 46/149 (30%)

Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H+  E   L  ++H   V L    + + ++YLV+EF  GG+   +L        D    +
Sbjct: 77  HVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFY 136

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L+ E+        IV+RDLKP+N+L
Sbjct: 137 AAQIV------------------------------LIFEYLQS---LNIVYRDLKPENLL 163

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           L           +   +K+ DFGFA+ + 
Sbjct: 164 LD----------KDGFIKMTDFGFAKVVD 182

Length = 340

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 38.8 bits (90), Expect = 5e-04
 Identities = 34/137 (24%), Positives = 56/137 (40%), Gaps = 33/137 (24%)

Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
           HH N++ LL   E+  ++Y+ +E+   G+L D+L     L  D    F K+         
Sbjct: 61  HHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDP--AFAKE--------- 109

Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDL---ARIVHRDLKPQNILLSHSFGKQY 139
                H     L     S Q +    +   G       + +HRDL  +N+L+        
Sbjct: 110 -----HGTASTL----TSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG------- 153

Query: 140 PQPQHIKLKIADFGFAR 156
              +++  KIADFG +R
Sbjct: 154 ---ENLASKIADFGLSR 167

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 38.7 bits (90), Expect = 6e-04
 Identities = 41/147 (27%), Positives = 57/147 (38%), Gaps = 52/147 (35%)

Query: 16  LKELTELHHENVVELLHCKESD------QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           L  L  + HENV+ LL    S       Q  YLVM +    DL   +     LSED ++ 
Sbjct: 65  LTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIMGHP--LSEDKVQY 121

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            + Q++  LK               +H                    A I+HRDLKP N+
Sbjct: 122 LVYQMLCGLK--------------YIHS-------------------AGIIHRDLKPGNL 148

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFAR 156
            ++          +  +LKI DFG AR
Sbjct: 149 AVN----------EDCELKILDFGLAR 165

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 38.4 bits (89), Expect = 6e-04
 Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 44/127 (34%)

Query: 31  LHCK-ESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE 89
           L+C  ++ +H++ VMEF NGGDL  ++  KG         +  +IV  L           
Sbjct: 61  LYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGL----------- 109

Query: 90  NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKI 149
              + LH K                    I++RDLK  N++L         +  HI  KI
Sbjct: 110 ---QFLHSKG-------------------IIYRDLKLDNVMLD--------RDGHI--KI 137

Query: 150 ADFGFAR 156
           ADFG  +
Sbjct: 138 ADFGMCK 144

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 38.5 bits (89), Expect = 6e-04
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 33/136 (24%)

Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     D  +Y+++E+ + G+L +YL ++     D              +F  
Sbjct: 77  HKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDY-------------SFDT 123

Query: 84  KELHHENVVELLHCKESDQHVYLV---MEFCNGGDLARIVHRDLKPQNILLSHSFGKQYP 140
            +L  E     L  K+     Y V   ME+       + +HRDL  +N+L++        
Sbjct: 124 CKLPEEQ----LTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVT-------- 168

Query: 141 QPQHIKLKIADFGFAR 156
             +   +KIADFG AR
Sbjct: 169 --EDNVMKIADFGLAR 182

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 38.1 bits (88), Expect = 8e-04
 Identities = 28/111 (25%), Positives = 48/111 (43%), Gaps = 44/111 (39%)

Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDL---------------------ARI-- 119
           +K+L H+ +V+L +   S++ +Y+V E+ + G L                     A++  
Sbjct: 55  MKKLRHDKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAA 113

Query: 120 ----------VHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
                     +HRDL+  NIL+             +  KIADFG AR ++D
Sbjct: 114 GMAYIERMNYIHRDLRSANILVGDG----------LVCKIADFGLARLIED 154

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 38.2 bits (89), Expect = 8e-04
 Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 45/136 (33%)

Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQ 82
           H +VV LL    S Q   L+ +    G L DY+ + K  +    +  +  QI + +    
Sbjct: 68  HPHVVRLLGICLSSQVQ-LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMS--- 123

Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQP 142
                                 YL  +        R+VHRDL  +N+L+          P
Sbjct: 124 ----------------------YLEEK--------RLVHRDLAARNVLVK--------TP 145

Query: 143 QHIKLKIADFGFARFL 158
           QH+  KI DFG A+ L
Sbjct: 146 QHV--KITDFGLAKLL 159

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 38.1 bits (88), Expect = 8e-04
 Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 51/151 (33%)

Query: 16  LKELTELHHENVVELLHC------KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           L+ L  + HENV+ LL         E+   VYLV     G DL + +V    LS++ ++ 
Sbjct: 65  LRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNN-IVKCQKLSDEHVQF 122

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            + Q+++ LK               +H                    A I+HRDLKP N+
Sbjct: 123 LIYQLLRGLK--------------YIHS-------------------AGIIHRDLKPSNV 149

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            ++          +  +L+I DFG AR   D
Sbjct: 150 AVN----------EDCELRILDFGLARQADD 170

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 38.1 bits (88), Expect = 0.001
 Identities = 41/144 (28%), Positives = 53/144 (36%), Gaps = 46/144 (31%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
           I+KE   L +L H N +E   C   +   +LVME+C G       V K  L E  I    
Sbjct: 68  IIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAIT 127

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
              +Q L       LH        H                       +HRD+K  NILL
Sbjct: 128 HGALQGLAY-----LHS-------HNM---------------------IHRDIKAGNILL 154

Query: 132 SHSFGKQYPQPQHIKLKIADFGFA 155
           +        +P  +KL  ADFG A
Sbjct: 155 T--------EPGQVKL--ADFGSA 168

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 37.9 bits (88), Expect = 0.001
 Identities = 40/184 (21%), Positives = 64/184 (34%), Gaps = 58/184 (31%)

Query: 16  LKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-----------GTLS 63
           LK L+ L  H+N+V LL        V ++ E+C  GDL ++L  K             +S
Sbjct: 92  LKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEIS 151

Query: 64  EDT------------IRI---FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVM 108
           E +            IR    F  Q        +          +    ++++    L +
Sbjct: 152 ETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDL 211

Query: 109 EFCNGGDLARI----------------VHRDLKPQNILLSHSFGKQYPQPQHIKLKIADF 152
           +     DL R                 +HRD+  +N+LL+            +  KI DF
Sbjct: 212 D-----DLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDG---------RV-AKICDF 256

Query: 153 GFAR 156
           G AR
Sbjct: 257 GLAR 260

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 47/148 (31%)

Query: 17  KELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLK 72
           + L ++H   +V L +  ++   + LVM   NGGDL  ++ +         E     +  
Sbjct: 45  RILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTA 104

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           QI+  L              E LH     Q               RI++RDLKP+N+LL 
Sbjct: 105 QIISGL--------------EHLH-----QR--------------RIIYRDLKPENVLLD 131

Query: 133 HSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +             ++I+D G A  L+D
Sbjct: 132 NDG----------NVRISDLGLAVELKD 149

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 41/97 (42%)

Query: 91  VVELLHCKESDQHVYLVMEFCNGGDLAR-------------------------------I 119
           + +L  C ++   +Y VME+ NGGDL                                 I
Sbjct: 63  LTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGI 122

Query: 120 VHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           ++RDLK  N++L            HI  KIADFG  +
Sbjct: 123 IYRDLKLDNVMLD--------AEGHI--KIADFGMCK 149

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 45/145 (31%)

Query: 19  LTELHHENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQ 76
           L  L H+N+V+      S   +++ LVME+   G L DYL       +   R+  ++++ 
Sbjct: 59  LKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYL------QKHRERLDHRKLL- 111

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L A Q+             CK         ME+       R VHRDL  +NIL+     
Sbjct: 112 -LYASQI-------------CKG--------MEYLGS---KRYVHRDLATRNILVESEN- 145

Query: 137 KQYPQPQHIKLKIADFGFARFL-QD 160
                    ++KI DFG  + L QD
Sbjct: 146 ---------RVKIGDFGLTKVLPQD 161

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 37.7 bits (87), Expect = 0.001
 Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 46/144 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI--FLKQIVQ 76
           +  L H+ +V+L H   + + +Y++ EF   G L D+L S     +   ++  F  QI +
Sbjct: 55  MKTLQHDKLVKL-HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAE 113

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            +   + +                                   +HRDL+  NIL+S S  
Sbjct: 114 GMAFIEQRNY---------------------------------IHRDLRAANILVSAS-- 138

Query: 137 KQYPQPQHIKLKIADFGFARFLQD 160
                   +  KIADFG AR ++D
Sbjct: 139 --------LVCKIADFGLARVIED 154

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional

 Score = 37.8 bits (88), Expect = 0.001
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 9/37 (24%)

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           IVHRD+KPQNI+ S   G           KI D G A
Sbjct: 276 IVHRDVKPQNIIFSEGSG---------SFKIIDLGAA 303

Length = 566

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 46/146 (31%)

Query: 17  KELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIV 75
           + + +L H  +V+L         + LV EF   G L+DYL + +G  S++T+        
Sbjct: 51  QVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETL-------- 102

Query: 76  QALKAFQVKELHHENVVELLHCKE-SDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
                             L  C +  +   YL        + + ++HRDL  +N L+  +
Sbjct: 103 ------------------LGMCLDVCEGMAYL--------ESSNVIHRDLAARNCLVGEN 136

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                       +K++DFG  RF+ D
Sbjct: 137 ----------QVVKVSDFGMTRFVLD 152

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 33/123 (26%), Positives = 50/123 (40%), Gaps = 37/123 (30%)

Query: 13  RHILKE----LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIR 68
           +HI+ E    L  + H  +V L    ++   +Y V+++ NGG+L  +L  +    E   R
Sbjct: 40  KHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRAR 99

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
            +  +I  AL       LH  N                            IV+RDLKP+N
Sbjct: 100 FYAAEIASALGY-----LHSLN----------------------------IVYRDLKPEN 126

Query: 129 ILL 131
           ILL
Sbjct: 127 ILL 129

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 37.3 bits (87), Expect = 0.002
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 10/43 (23%)

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +I+HRD+KP NILL  +         +IKL   DFG +  L D
Sbjct: 128 KIIHRDVKPSNILLDRN--------GNIKL--CDFGISGQLVD 160

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 37.3 bits (86), Expect = 0.002
 Identities = 35/137 (25%), Positives = 52/137 (37%), Gaps = 43/137 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +  H N+V           +++ MEFC GG L D     G LSE  I           
Sbjct: 60  MKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYV-------- 111

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                              +E+ Q +Y +    + G     +HRD+K  NILL+ +    
Sbjct: 112 ------------------SRETLQGLYYLH---SKGK----MHRDIKGANILLTDN---- 142

Query: 139 YPQPQHIKLKIADFGFA 155
                H+KL  ADFG +
Sbjct: 143 ----GHVKL--ADFGVS 153

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 37.1 bits (86), Expect = 0.002
 Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 33/108 (30%)

Query: 26  NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE 85
           N+V L     S+  V+LV++   GG L  ++     + E+ ++ +  ++V AL A     
Sbjct: 46  NMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDA----- 100

Query: 86  LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           LH E +V    C                        RDL P NILL  
Sbjct: 101 LHREGIV----C------------------------RDLNPNNILLDD 120

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 33/121 (27%), Positives = 49/121 (40%), Gaps = 44/121 (36%)

Query: 40  VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKE 99
           ++++ME+  GG   D L+  G L E  I   L++I++ L       LH E          
Sbjct: 77  LWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDY-----LHSE---------- 120

Query: 100 SDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
                             R +HRD+K  N+LLS          +   +K+ADFG A  L 
Sbjct: 121 ------------------RKIHRDIKAANVLLS----------EQGDVKLADFGVAGQLT 152

Query: 160 D 160
           D
Sbjct: 153 D 153

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 37.0 bits (85), Expect = 0.002
 Identities = 32/121 (26%), Positives = 48/121 (39%), Gaps = 44/121 (36%)

Query: 40  VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKE 99
           ++++ME+  GG   D L+  G   E  I   LK+I++ L       LH E          
Sbjct: 77  LWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDY-----LHSE---------- 120

Query: 100 SDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
                             + +HRD+K  N+LLS          +   +K+ADFG A  L 
Sbjct: 121 ------------------KKIHRDIKAANVLLS----------EQGDVKLADFGVAGQLT 152

Query: 160 D 160
           D
Sbjct: 153 D 153

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 38/124 (30%)

Query: 10  VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           +L + IL+++       +V L +  ES  H+ LVM   NGGDL  ++ + G    +  R+
Sbjct: 41  LLEKEILEKVNSPF---IVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERV 97

Query: 70  --FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
             +  QI                   +LH    D                 IV+RD+KP+
Sbjct: 98  IHYSAQITCG----------------ILHLHSMD-----------------IVYRDMKPE 124

Query: 128 NILL 131
           N+LL
Sbjct: 125 NVLL 128

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 45/146 (30%)

Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L    H  +  L +  ++   +  VME+ NGG+L  +L  +   SED  R +
Sbjct: 41  HTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY 100

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             +IV AL              + LH +++                  +V+RDLK +N++
Sbjct: 101 GAEIVSAL--------------DYLHSEKN------------------VVYRDLKLENLM 128

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           L         +  HI  KI DFG  +
Sbjct: 129 LD--------KDGHI--KITDFGLCK 144

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 32/98 (32%), Positives = 50/98 (51%), Gaps = 20/98 (20%)

Query: 67  IRIFLKQIVQALKAFQ----VKELHHENVVELLHCK-ESDQHVYLVME-FCNGGDL--AR 118
           + +F  Q  ++L+ FQ    V EL   N+ +++H + + ++  YL+ +  C    L  A 
Sbjct: 86  LNVFTPQ--KSLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAG 143

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           I+HRDLKP NI++               LKI DFG AR
Sbjct: 144 IIHRDLKPSNIVVKSD----------CTLKILDFGLAR 171

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 36.7 bits (85), Expect = 0.002
 Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 45/131 (34%)

Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKQIVQALKAFQVK 84
           VV L +  E+   + LV+   NGGDL  ++ + G     E+    +  +I   L+     
Sbjct: 62  VVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLE----- 116

Query: 85  ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQH 144
           +LH E                            RIV+RDLKP+NILL   +G       H
Sbjct: 117 DLHRE----------------------------RIVYRDLKPENILLD-DYG-------H 140

Query: 145 IKLKIADFGFA 155
           I  +I+D G A
Sbjct: 141 I--RISDLGLA 149

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 36.9 bits (85), Expect = 0.003
 Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 33/136 (24%)

Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     D  +Y+++E+ + G+L +YL ++                      + 
Sbjct: 83  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRP-----------------PGMEY 125

Query: 84  KELHHENVVELLHCKESDQHVYLV---MEFCNGGDLARIVHRDLKPQNILLSHSFGKQYP 140
                +   E L  K+     Y V   ME+       + +HRDL  +N+L++        
Sbjct: 126 CYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT-------- 174

Query: 141 QPQHIKLKIADFGFAR 156
             +   +KIADFG AR
Sbjct: 175 --EDNVMKIADFGLAR 188

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 36.6 bits (84), Expect = 0.003
 Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 46/151 (30%)

Query: 4   QSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLS 63
           Q K  +++   ++  + E  + N+V  L        +++VME+  GG L D +V++  + 
Sbjct: 58  QPKKELIINEILV--MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMD 114

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
           E  I    ++ +QAL              E LH  +                   ++HRD
Sbjct: 115 EGQIAAVCRECLQAL--------------EFLHSNQ-------------------VIHRD 141

Query: 124 LKPQNILLSHSFGKQYPQPQHIKLKIADFGF 154
           +K  NILL               +K+ DFGF
Sbjct: 142 IKSDNILLGMDG----------SVKLTDFGF 162

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 36.6 bits (84), Expect = 0.003
 Identities = 34/144 (23%), Positives = 59/144 (40%), Gaps = 45/144 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           +H+ ++ +  +H  +V L  C +++  ++ V+E+ NGGDL  ++  +  L E+  R +  
Sbjct: 46  KHVFEQAS--NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA 103

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I  AL       LH                               I++RDLK  N+LL 
Sbjct: 104 EISLALNY-----LHERG----------------------------IIYRDLKLDNVLLD 130

Query: 133 HSFGKQYPQPQHIKLKIADFGFAR 156
                      HIKL   D+G  +
Sbjct: 131 SE--------GHIKL--TDYGMCK 144

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 36.6 bits (84), Expect = 0.003
 Identities = 40/141 (28%), Positives = 57/141 (40%), Gaps = 52/141 (36%)

Query: 22  LHHENVVELLHC------KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           ++H+N++ LL+        E  Q VYLVME  +                      L Q++
Sbjct: 73  VNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN--------------------LCQVI 112

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           Q        EL HE +  LL+     Q +  +    + G    I+HRDLKP NI++    
Sbjct: 113 QM-------ELDHERMSYLLY-----QMLCGIKHLHSAG----IIHRDLKPSNIVVKSD- 155

Query: 136 GKQYPQPQHIKLKIADFGFAR 156
                      LKI DFG AR
Sbjct: 156 ---------CTLKILDFGLAR 167

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 43/130 (33%)

Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           +V L  C ++   ++LV+E+ NGGDL  ++  +  L E+  R +  +I  AL        
Sbjct: 58  LVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALN------- 110

Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                   LH +                    I++RDLK  N+LL            HIK
Sbjct: 111 -------FLHERG-------------------IIYRDLKLDNVLLD--------ADGHIK 136

Query: 147 LKIADFGFAR 156
           L   D+G  +
Sbjct: 137 L--TDYGMCK 144

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 47/144 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQI 74
           L +L+H NV++ L     D  + +V+E  + GDL+  +      K  + E T+  +  Q+
Sbjct: 56  LKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQL 115

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
             A              VE +H +                   R++HRD+KP N+ ++ +
Sbjct: 116 CSA--------------VEHMHSR-------------------RVMHRDIKPANVFITAT 142

Query: 135 FGKQYPQPQHIKLKIADFGFARFL 158
                       +K+ D G  RF 
Sbjct: 143 G----------VVKLGDLGLGRFF 156

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 36.7 bits (85), Expect = 0.003
 Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 43/133 (32%)

Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H  +V L  C +++  ++ V+EF +GGDL  ++  +  L E+  R +  +I  AL     
Sbjct: 55  HPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLAL----- 109

Query: 84  KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQ 143
                      LH +                    I++RDLK  N+LL            
Sbjct: 110 ---------NFLHERG-------------------IIYRDLKLDNVLLDAE--------G 133

Query: 144 HIKLKIADFGFAR 156
           HIKL   D+G  +
Sbjct: 134 HIKL--TDYGMCK 144

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 36.6 bits (85), Expect = 0.003
 Identities = 34/143 (23%), Positives = 54/143 (37%), Gaps = 38/143 (26%)

Query: 17  KELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQ 76
           K L+ L   N+  LL     D  + ++ME+   GDL  +L  K       +    K +  
Sbjct: 71  KILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFL-QKHVAETSGLACNSKSLSF 129

Query: 77  ALKAFQVKELHHENVVELLH--CKESDQHVYLV-MEFCNGGDLARIVHRDLKPQNILLSH 133
           +                LL+   + +    YL  + F         VHRDL  +N L+  
Sbjct: 130 ST---------------LLYMATQIASGMRYLESLNF---------VHRDLATRNCLVGK 165

Query: 134 SFGKQYPQPQHIKLKIADFGFAR 156
           ++           +KIADFG +R
Sbjct: 166 NY----------TIKIADFGMSR 178

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 10/41 (24%)

Query: 120 VHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           VHRDL  +NIL++           ++  K++DFG +R L+D
Sbjct: 128 VHRDLAARNILVN----------SNLVCKVSDFGLSRRLED 158

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 14/104 (13%)

Query: 12  TRHILKELTELHHEN----VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTI 67
           T H   E   L H      +V L +  ++D  ++L++++ NGG+L  +L  +    E  +
Sbjct: 48  TEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEV 107

Query: 68  RIFLKQIVQALKAFQ-----VKELHHENVVELLHCKESDQHVYL 106
           +I+  +IV AL+         +++  EN++      +S+ HV L
Sbjct: 108 QIYSGEIVLALEHLHKLGIIYRDIKLENIL-----LDSNGHVVL 146

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 10/41 (24%)

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           R+VHRDL  +N+L+          P H+  KI DFG AR L
Sbjct: 129 RLVHRDLAARNVLVK--------SPNHV--KITDFGLARLL 159

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 37/146 (25%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           +K ++ L + N++ LL    SD  + ++ E+   GDL  +L  +   S  T         
Sbjct: 68  IKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFT--------- 118

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD-LARI--VHRDLKPQNILLS 132
               A  +  +   N++            Y+ ++  +G   LA +  VHRDL  +N L+ 
Sbjct: 119 ---HANNIPSVSIANLL------------YMAVQIASGMKYLASLNFVHRDLATRNCLVG 163

Query: 133 HSFGKQYPQPQHIKLKIADFGFARFL 158
                      H  +KIADFG +R L
Sbjct: 164 ----------NHYTIKIADFGMSRNL 179

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 10/41 (24%)

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           R+VHRDL  +N+L+          PQH+  KI DFG A+ L
Sbjct: 129 RLVHRDLAARNVLVK--------TPQHV--KITDFGLAKLL 159

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 45/139 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKQIVQ 76
           L +++ + VV L +  E+   + LV+   NGGDL  ++ + G     E+    +  +I+ 
Sbjct: 54  LEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILC 113

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L+     +LH EN                             V+RDLKP+NILL   +G
Sbjct: 114 GLE-----DLHREN----------------------------TVYRDLKPENILLD-DYG 139

Query: 137 KQYPQPQHIKLKIADFGFA 155
                  HI  +I+D G A
Sbjct: 140 -------HI--RISDLGLA 149

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 36.0 bits (83), Expect = 0.004
 Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 42/144 (29%)

Query: 17  KELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQ 76
           K + +L HE +V+L       + +Y+V E+ + G L +YL   G                
Sbjct: 51  KVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHG---------------- 94

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
             K FQ  +L       L  CK+    V   M +       + +HRDL  +N L+     
Sbjct: 95  --KRFQPSQL-------LEMCKD----VCEGMAYLES---KQFIHRDLAARNCLVD---- 134

Query: 137 KQYPQPQHIKLKIADFGFARFLQD 160
                     +K++DFG +R++ D
Sbjct: 135 ------DQGCVKVSDFGLSRYVLD 152

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 35.9 bits (83), Expect = 0.004
 Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 44/124 (35%)

Query: 71  LKQIVQALK-AFQVKELHHENVVELLH-CKESDQHVYLVMEFCNGGDL------------ 116
           L+++ Q LK    +K+  H NV+ LL  C  S+    +V+ +   GDL            
Sbjct: 37  LEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPT 96

Query: 117 --------------------ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
                                + VHRDL  +N +L  SF           +K+ADFG AR
Sbjct: 97  VKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESF----------TVKVADFGLAR 146

Query: 157 FLQD 160
            + D
Sbjct: 147 DIYD 150

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 36.0 bits (83), Expect = 0.004
 Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 10/41 (24%)

Query: 120 VHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           VHRDL  +NIL++           ++  K++DFG +RFL+D
Sbjct: 128 VHRDLAARNILVN----------SNLVCKVSDFGLSRFLED 158

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 21/85 (24%), Positives = 48/85 (56%), Gaps = 10/85 (11%)

Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ---- 82
           +V L +  +++  ++L++++ +GG++  +L  +   SED +R +  +I+ AL+       
Sbjct: 67  LVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGI 126

Query: 83  -VKELHHENVVELLHCKESDQHVYL 106
             +++  EN+  LL   +S+ HV L
Sbjct: 127 VYRDIKLENI--LL---DSEGHVVL 146

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	160
KOG0595|consensus	429		99.93
KOG0615|consensus	475		99.89
KOG0581|consensus	364		99.84
KOG0197|consensus	468		99.83
KOG0575|consensus	592		99.83
KOG0598|consensus	357		99.83
KOG0611|consensus	668		99.82
KOG0616|consensus	355		99.81
KOG0599|consensus	411		99.8
KOG0192|consensus	362		99.8
KOG0591|consensus	375		99.8
KOG0592|consensus	604		99.8
KOG0583|consensus	370		99.79
KOG0605|consensus	550		99.78
KOG0588|consensus	786		99.78
KOG1187|consensus	361		99.78
KOG0600|consensus	560		99.78
KOG0593|consensus	396		99.77
KOG0194|consensus	474		99.76
KOG0198|consensus	313		99.76
KOG0033|consensus	355		99.75
KOG0585|consensus	576		99.74
KOG1026|consensus	774		99.74
KOG0586|consensus	596		99.73
KOG0610|consensus	459		99.73
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.72
KOG0584|consensus	632		99.72
KOG0589|consensus	426		99.72
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.72
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.72
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.71
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.71
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.71
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.71
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.71
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.71
KOG0659|consensus	318		99.7
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.7
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.7
KOG0578|consensus	550		99.7
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.7
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.69
PTZ00267	478	NIMA-related protein kinase; Provisional	99.69
KOG0594|consensus	323		99.69
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.69
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.69
KOG0694|consensus	694		99.69
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.69
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.69
KOG0661|consensus	538		99.68
KOG0608|consensus	1034		99.68
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.68
KOG0032|consensus	382		99.68
KOG0597|consensus	808		99.68
KOG4721|consensus	904		99.67
KOG0660|consensus	359		99.67
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.67
KOG0582|consensus	516		99.67
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.67
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.66
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.66
KOG0580|consensus	281		99.66
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.66
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.66
PHA02988	283	hypothetical protein; Provisional	99.66
KOG1094|consensus	807		99.65
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.65
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.65
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.65
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.65
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.64
KOG0663|consensus	419		99.64
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.64
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.64
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.64
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.64
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.64
PHA03212	391	serine/threonine kinase US3; Provisional	99.63
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.63
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.63
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.63
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.63
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.63
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.63
KOG4717|consensus	864		99.63
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.63
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.63
KOG4236|consensus	888		99.63
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.63
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.63
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.62
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.62
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.62
KOG0658|consensus	364		99.62
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.62
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.62
KOG4250|consensus	732		99.61
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.61
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.61
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.61
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.61
KOG1989|consensus	738		99.61
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.61
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.61
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.61
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.6
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.6
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.6
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.6
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.6
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.6
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.6
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.6
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.6
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.6
KOG0196|consensus	996		99.6
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.6
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.6
KOG1095|consensus	1025		99.59
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.59
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.59
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.59
KOG4278|consensus	1157		99.59
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.59
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.59
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.59
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.59
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.59
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.59
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.59
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.58
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.58
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.58
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.58
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.58
PHA03207	392	serine/threonine kinase US3; Provisional	99.58
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.58
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.58
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.58
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.58
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.58
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.57
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.57
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.57
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.57
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.57
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.57
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.57
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.57
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.57
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.57
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.57
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.57
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.57
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.57
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.57
KOG4645|consensus	1509		99.57
KOG0690|consensus	516		99.57
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.57
KOG0662|consensus	292		99.57
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.57
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.57
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.56
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.56
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.56
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.56
PHA03211	461	serine/threonine kinase US3; Provisional	99.56
KOG4257|consensus	974		99.56
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.56
KOG0986|consensus	591		99.56
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.56
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.56
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.56
KOG0612|consensus	1317		99.56
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.56
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.56
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.56
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.56
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.56
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.56
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.56
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.55
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.55
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.55
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.55
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.55
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.55
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.55
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.55
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.55
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.55
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.55
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.54
KOG0604|consensus	400		99.54
KOG0666|consensus	438		99.54
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.54
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.54
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.54
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.54
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.54
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.54
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.54
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.54
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.54
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.54
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.54
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.54
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.54
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.54
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.54
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.54
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.53
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.53
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.53
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.53
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.53
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.53
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.53
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.53
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.52
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.52
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.52
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.52
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.52
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.52
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.52
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.52
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.52
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.52
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.52
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.52
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.52
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.52
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.51
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.51
PHA03209	357	serine/threonine kinase US3; Provisional	99.51
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.51
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.51
PTZ00283	496	serine/threonine protein kinase; Provisional	99.51
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.51
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.51
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.51
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.51
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.51
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.5
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.5
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.5
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.5
PHA03210	501	serine/threonine kinase US3; Provisional	99.5
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.5
KOG1151|consensus	775		99.5
PTZ00036	440	glycogen synthase kinase; Provisional	99.5
KOG4279|consensus	1226		99.5
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.5
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.5
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.5
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.5
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.5
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.49
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.49
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.49
KOG0579|consensus	1187		99.49
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.49
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.49
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.49
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.49
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.49
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.49
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.49
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.49
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.49
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.49
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.48
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.48
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.48
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.48
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.48
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.48
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.48
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.47
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.47
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.47
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.47
PRK09188	365	serine/threonine protein kinase; Provisional	99.47
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.47
KOG0667|consensus	586		99.47
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.47
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.47
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.46
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.46
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.46
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.46
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.46
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.46
KOG0193|consensus	678		99.46
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.46
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.46
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.46
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.45
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.45
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.45
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.45
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.45
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.45
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.45
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.45
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.45
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.45
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.45
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.44
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.44
KOG0200|consensus	609		99.44
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.44
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.44
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.44
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.44
KOG0607|consensus	463		99.44
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.44
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.44
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.43
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.43
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.43
PRK10345	210	hypothetical protein; Provisional	99.43
PLN00009	294	cyclin-dependent kinase A; Provisional	99.43
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.43
KOG0574|consensus	502		99.43
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.42
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.42
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.42
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.42
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.42
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.42
KOG0201|consensus	467		99.42
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.42
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.42
KOG0669|consensus	376		99.42
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.41
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.41
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.41
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.41
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.4
KOG0199|consensus	1039		99.4
KOG0614|consensus	732		99.4
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.4
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.4
KOG0577|consensus	948		99.4
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.4
KOG0596|consensus	677		99.39
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.38
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.38
KOG1027|consensus	903		99.38
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.38
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.38
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.38
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.38
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.38
KOG1152|consensus	772		99.37
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.37
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.37
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.37
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.36
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.35
KOG0695|consensus	593		99.35
KOG0587|consensus	953		99.34
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.34
KOG0576|consensus	829		99.34
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.34
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.33
KOG2345|consensus	302		99.33
KOG0668|consensus	338		99.33
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.33
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.33
KOG3653|consensus	534		99.33
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.32
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.32
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.31
PRK12274	218	serine/threonine protein kinase; Provisional	99.29
KOG0603|consensus	612		99.29
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.29
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.28
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.27
KOG0983|consensus	391		99.25
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.25
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.25
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.25
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.24
KOG0984|consensus	282		99.24
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.22
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.22
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.22
PTZ00284	467	protein kinase; Provisional	99.21
KOG0696|consensus	683		99.19
KOG0664|consensus	449		99.19
KOG1025|consensus	1177		99.18
PHA02882	294	putative serine/threonine kinase; Provisional	99.18
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.17
smart00090	237	RIO RIO-like kinase.	99.15
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.14
PRK14879	211	serine/threonine protein kinase; Provisional	99.14
KOG0665|consensus	369		99.09
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.09
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.08
KOG1345|consensus	378		99.07
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.06
KOG1006|consensus	361		99.04
KOG2052|consensus	513		99.02
KOG1167|consensus	418		98.99
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.98
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.92
PLN03224	507	probable serine/threonine protein kinase; Provisio	98.92
KOG0671|consensus	415		98.88
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.86
COG0515	384	SPS1 Serine/threonine protein kinase [General func	98.82
KOG1035|consensus	1351		98.8
KOG0670|consensus	752		98.8
PLN00181	793	protein SPA1-RELATED; Provisional	98.78
KOG1164|consensus	322		98.74
KOG1165|consensus	449		98.67
KOG1163|consensus	341		98.64
KOG0590|consensus	601		98.62
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	98.61
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.57
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.55
KOG0595|consensus	429		98.53
KOG4158|consensus	598		98.49
KOG0603|consensus	612		98.45
KOG1166|consensus	974		98.44
KOG3087|consensus	229		98.43
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	98.38
KOG1024|consensus	563		98.33
KOG1290|consensus	590		98.23
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.22
KOG1023|consensus	484		98.21
KOG0611|consensus	668		98.19
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	98.18
KOG0615|consensus	475		98.11
KOG0575|consensus	592		97.96
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	97.95
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	97.89
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	97.85
KOG1243|consensus	690		97.82
KOG0591|consensus	375		97.76
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	97.7
KOG0586|consensus	596		97.69
KOG0581|consensus	364		97.57
KOG0032|consensus	382		97.54
KOG0605|consensus	550		97.45
KOG0610|consensus	459		97.4
KOG0590|consensus	601		97.38
KOG0583|consensus	370		97.35
KOG0592|consensus	604		97.34
KOG1240|consensus	1431		97.28
COG0478	304	RIO-like serine/threonine protein kinase fused to	97.27
KOG0589|consensus	426		97.22
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	97.22
KOG0694|consensus	694		97.22
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	97.17
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	97.13
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	97.13
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	97.1
KOG0194|consensus	474		97.09
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	97.07
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	97.06
KOG0197|consensus	468		97.03
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	97.03
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	97.02
KOG3741|consensus	655		96.98
KOG0598|consensus	357		96.98
PTZ00263	329	protein kinase A catalytic subunit; Provisional	96.97
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	96.94
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	96.92
KOG1235|consensus	538		96.92
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	96.9
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	96.89
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	96.88
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	96.87
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	96.86
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	96.85
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	96.84
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	96.83
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	96.83
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	96.82
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	96.81
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	96.8
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	96.79
KOG0578|consensus	550		96.78
KOG0192|consensus	362		96.77
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	96.75
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	96.73
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	96.7
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	96.69
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	96.69
KOG0582|consensus	516		96.68
PHA02988	283	hypothetical protein; Provisional	96.66
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	96.65
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	96.64
KOG0597|consensus	808		96.63
KOG4721|consensus	904		96.61
KOG0580|consensus	281		96.61
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	96.6

>KOG0595|consensus

Probab=99.93  E-value=6.3e-26  Score=173.68  Aligned_cols=119  Identities=52%  Similarity=0.843  Sum_probs=105.5

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .+....+...|+.+|+.++|||||++++++.+.+.+|+|||||.||||..|+..++.+++.+.+.++.|+..+++.+|.+
T Consensus        49 ~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~  128 (429)
T KOG0595|consen   49 NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN  128 (429)
T ss_pred             CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            45567788999999999999999999999999999999999999999999999999999999999999999999998764


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccCC
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD  160 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~~  160 (160)
                                                       +++|||+||+|+|++.+.+..    ....+||+|||+||++++
T Consensus       129 ---------------------------------~IiHRDLKPQNiLLs~~~~~~----~~~~LKIADFGfAR~L~~  167 (429)
T KOG0595|consen  129 ---------------------------------NIIHRDLKPQNILLSTTARND----TSPVLKIADFGFARFLQP  167 (429)
T ss_pred             ---------------------------------CeeeccCCcceEEeccCCCCC----CCceEEecccchhhhCCc
Confidence                                             689999999999999653211    115789999999999863

>KOG0615|consensus

Probab=99.89  E-value=3.1e-23  Score=159.28  Aligned_cols=107  Identities=36%  Similarity=0.630  Sum_probs=98.2

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         12 TRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                      -++|+++|++|+|||||++++.|......|+|+||+.||+|.+++..++.+.+..-+.+..|++.++.++|..       
T Consensus       223 v~~EieILkkL~HP~IV~~~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~-------  295 (475)
T KOG0615|consen  223 VQNEIEILKKLSHPNIVRIKDFFEVPDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ-------  295 (475)
T ss_pred             hHHHHHHHHhcCCCCEEEEeeeeecCCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc-------
Confidence            3789999999999999999999999999999999999999999999999999999999999999999998863       


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                +++||||||+|||+..+       .....+||+|||+|++.
T Consensus       296 --------------------------GI~HRDiKPeNILl~~~-------~e~~llKItDFGlAK~~  329 (475)
T KOG0615|consen  296 --------------------------GIIHRDIKPENILLSND-------AEDCLLKITDFGLAKVS  329 (475)
T ss_pred             --------------------------CcccccCCcceEEeccC-------CcceEEEecccchhhcc
Confidence                                      79999999999999854       25568999999999876

>KOG0581|consensus

Probab=99.84  E-value=2.8e-21  Score=146.70  Aligned_cols=111  Identities=25%  Similarity=0.429  Sum_probs=97.4

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCC-cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQ-HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~-~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .--....+|++++++++||+||.++++|..++ .++++||||.+|+|...+...+++++..+..+..++++++.++|.. 
T Consensus       119 ~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~-  197 (364)
T KOG0581|consen  119 ALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE-  197 (364)
T ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc-
Confidence            33455678999999999999999999999999 4999999999999999887778899999999999999999998742 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                     .++||||+||+|+|+++++          .+||+|||.++-+.
T Consensus       198 -------------------------------~~IIHRDIKPsNlLvNskG----------eVKicDFGVS~~lv  230 (364)
T KOG0581|consen  198 -------------------------------RKIIHRDIKPSNLLVNSKG----------EVKICDFGVSGILV  230 (364)
T ss_pred             -------------------------------cCeeeccCCHHHeeeccCC----------CEEeccccccHHhh
Confidence                                           1689999999999999654          89999999987543

>KOG0197|consensus

Probab=99.83  E-value=1.1e-20  Score=148.67  Aligned_cols=107  Identities=31%  Similarity=0.520  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+..|..++++|+|++||++++++..+.++|||+||++.|+|.++++.  .+.+.......+..++++++.++...   
T Consensus       246 ~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---  322 (468)
T KOG0197|consen  246 EAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---  322 (468)
T ss_pred             hHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---
Confidence            3455899999999999999999999998999999999999999999986  45678888999999999999887653   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                    .+|||||.++|||++.+          ..+||+|||+||...
T Consensus       323 ------------------------------~~IHRDLAARNiLV~~~----------~~vKIsDFGLAr~~~  354 (468)
T KOG0197|consen  323 ------------------------------NYIHRDLAARNILVDED----------LVVKISDFGLARLIG  354 (468)
T ss_pred             ------------------------------CccchhhhhhheeeccC----------ceEEEcccccccccC
Confidence                                          57999999999999854          489999999999543

>KOG0575|consensus

Probab=99.83  E-value=1.4e-20  Score=150.34  Aligned_cols=112  Identities=35%  Similarity=0.587  Sum_probs=101.9

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      +........+|+++.+.|+|||||+++++|++...+|++.|+|..+.+..+++.++.+.|.+++.+..|++.++.++|..
T Consensus        58 k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~  137 (592)
T KOG0575|consen   58 KPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL  137 (592)
T ss_pred             CcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            44556667889999999999999999999999999999999999999999988888999999999999999999998864


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                       ++||||+|..|++++.+          .++||+|||+|..+.
T Consensus       138 ---------------------------------~IiHRDLKLGNlfL~~~----------~~VKIgDFGLAt~le  169 (592)
T KOG0575|consen  138 ---------------------------------GIIHRDLKLGNLFLNEN----------MNVKIGDFGLATQLE  169 (592)
T ss_pred             ---------------------------------CceecccchhheeecCc----------CcEEecccceeeeec
Confidence                                             68999999999999854          489999999998764

>KOG0598|consensus

Probab=99.83  E-value=1e-20  Score=143.58  Aligned_cols=107  Identities=36%  Similarity=0.601  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .+.-.++|..+|..++||+||.++.+|++...+|+|+||++||+|.-.+...+.+++...+.++.+++.++.++|..   
T Consensus        68 e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~---  144 (357)
T KOG0598|consen   68 EVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSK---  144 (357)
T ss_pred             hHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC---
Confidence            45567788889999999999999999999999999999999999999888889999999999999999999998763   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|||+||+|||++..          ++++|+|||+++.
T Consensus       145 ------------------------------gIiyRDlKPENILLd~~----------GHi~LtDFgL~k~  174 (357)
T KOG0598|consen  145 ------------------------------GIIYRDLKPENILLDEQ----------GHIKLTDFGLCKE  174 (357)
T ss_pred             ------------------------------CeeeccCCHHHeeecCC----------CcEEEeccccchh
Confidence                                          79999999999999854          4899999999973

>KOG0611|consensus

Probab=99.82  E-value=2.4e-20  Score=144.01  Aligned_cols=111  Identities=36%  Similarity=0.682  Sum_probs=100.6

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ++.-++..+.|++|++.|+||||+..+++|+-.+.+.+||||.++|.|.+|+..++.+++.+.+.++.|++.++.++|.+
T Consensus        93 deqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn  172 (668)
T KOG0611|consen   93 DEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN  172 (668)
T ss_pred             cHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc
Confidence            34457788999999999999999999999999999999999999999999999999999999999999999999887643


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|||+|.+|||++.|          .++||+|||++.++
T Consensus       173 ---------------------------------rVvHRDLKLENILLD~N----------~NiKIADFGLSNly  203 (668)
T KOG0611|consen  173 ---------------------------------RVVHRDLKLENILLDQN----------NNIKIADFGLSNLY  203 (668)
T ss_pred             ---------------------------------cceecccchhheeecCC----------CCeeeeccchhhhh
Confidence                                             68999999999999854          48999999998654

>KOG0616|consensus

Probab=99.81  E-value=6.2e-20  Score=136.29  Aligned_cols=109  Identities=35%  Similarity=0.589  Sum_probs=97.7

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .+.-..+|-++|+.+.||+++++.+++.+.+.+|++|||.+||.+..++++.+++++...+.+..+++.++.++|..   
T Consensus        87 QveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~---  163 (355)
T KOG0616|consen   87 QVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL---  163 (355)
T ss_pred             HHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc---
Confidence            34445678888999999999999999999999999999999999999999999999999999999999999887753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                    ++++||+||+|+|++++          +.+|++|||+|+.+.
T Consensus       164 ------------------------------~iiYRDLKPENiLlD~~----------G~iKitDFGFAK~v~  195 (355)
T KOG0616|consen  164 ------------------------------DIIYRDLKPENLLLDQN----------GHIKITDFGFAKRVS  195 (355)
T ss_pred             ------------------------------CeeeccCChHHeeeccC----------CcEEEEeccceEEec
Confidence                                          68999999999999855          489999999997653

>KOG0599|consensus

Probab=99.80  E-value=5.2e-20  Score=135.91  Aligned_cols=110  Identities=40%  Similarity=0.649  Sum_probs=99.6

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .-..+.++|+.||+++ .||+|+.+.+.++++.++|+|+|.++.|.|.+++.+...+++...+.++.++.+++.++|.. 
T Consensus        64 ~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~-  142 (411)
T KOG0599|consen   64 EMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR-  142 (411)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh-
Confidence            3456788999999998 69999999999999999999999999999999999988899999999999999999988753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      .++|||+||+|||+++          +-+++++|||+|..++
T Consensus       143 --------------------------------~IVHRDLKpENILldd----------n~~i~isDFGFa~~l~  174 (411)
T KOG0599|consen  143 --------------------------------NIVHRDLKPENILLDD----------NMNIKISDFGFACQLE  174 (411)
T ss_pred             --------------------------------hhhhcccChhheeecc----------ccceEEeccceeeccC
Confidence                                            5899999999999974          4489999999998765

>KOG0192|consensus

Probab=99.80  E-value=1.8e-19  Score=140.31  Aligned_cols=108  Identities=31%  Similarity=0.391  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCC-cEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQ-HVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~-~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ...+++|+.+|.+++|||||.+++++..+. ..++|+||+++|+|..++..  ++.++......+.-+++.++.++|.. 
T Consensus        83 ~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~-  161 (362)
T KOG0192|consen   83 RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE-  161 (362)
T ss_pred             HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-
Confidence            668999999999999999999999998887 79999999999999998866  56788888888888888888776642 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCccc-ceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLAR-IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~-iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      . +||||+||+|+|++.++         .++||+|||+++..
T Consensus       162 --------------------------------~~iIHrDLK~~NiLv~~~~---------~~~KI~DFGlsr~~  194 (362)
T KOG0192|consen  162 --------------------------------GPIIHRDLKSDNILVDLKG---------KTLKIADFGLSREK  194 (362)
T ss_pred             --------------------------------CCeeecccChhhEEEcCCC---------CEEEECCCccceee
Confidence                                            3 79999999999998431         38999999999754

>KOG0591|consensus

Probab=99.80  E-value=4.3e-21  Score=141.83  Aligned_cols=111  Identities=32%  Similarity=0.542  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHhhcCCcceEEEee-eeecCCc-EEEEEEEeCCCceeEEEe----eecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428         10 VLTRHILKELTELHHENVVELLH-CKESDQH-VYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~-~~~~~~~-~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ...-.|+.+|++|+|||||++++ .+-.+.. ++++||++.+|||++++.    .++.+++.+++.+..|++.++..+|.
T Consensus        63 q~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~  142 (375)
T KOG0591|consen   63 QDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHS  142 (375)
T ss_pred             HHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhc
Confidence            34456899999999999999987 7766666 899999999999998765    34678999999999999999988774


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                      .   -|+                          ..++||||||.||+++.++          .+|++|||++|++.
T Consensus       143 ~---~~r--------------------------~~VmHRDIKPaNIFl~~~g----------vvKLGDfGL~r~l~  179 (375)
T KOG0591|consen  143 K---IPR--------------------------GTVMHRDIKPANIFLTANG----------VVKLGDFGLGRFLS  179 (375)
T ss_pred             c---ccc--------------------------cceeeccCcchheEEcCCC----------ceeeccchhHhHhc
Confidence            1   011                          1479999999999998554          89999999999875

>KOG0592|consensus

Probab=99.80  E-value=1.7e-19  Score=142.75  Aligned_cols=100  Identities=37%  Similarity=0.678  Sum_probs=90.6

Q ss_pred             HHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEe
Q psy11428         17 KELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELL   95 (160)
Q Consensus        17 ~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~   95 (160)
                      .+|..| .||.|++|+..|+++..+|+|+||+++|+|..++.+.|.+.+.+.+.+..+++.++.++|..           
T Consensus       125 ~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~-----------  193 (604)
T KOG0592|consen  125 EALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN-----------  193 (604)
T ss_pred             HHHHHhhCCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc-----------
Confidence            344455 89999999999999999999999999999999999999999999999999999999988763           


Q ss_pred             eeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         96 HCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        96 ~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                            ++||||+||+|||++.+          ..++|+|||.|+.++
T Consensus       194 ----------------------GIIHRDlKPENILLd~d----------mhikITDFGsAK~l~  225 (604)
T KOG0592|consen  194 ----------------------GIIHRDLKPENILLDKD----------GHIKITDFGSAKILS  225 (604)
T ss_pred             ----------------------CceeccCChhheeEcCC----------CcEEEeeccccccCC
Confidence                                  79999999999999854          489999999998765

>KOG0583|consensus

Probab=99.79  E-value=2e-19  Score=140.78  Aligned_cols=108  Identities=41%  Similarity=0.724  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ......|+.+++.++ ||||+++++++.....+|+||||+.||+|.+++..++++.+...+.++.|++.++.++|..   
T Consensus        63 ~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~---  139 (370)
T KOG0583|consen   63 DELIKREISILRRLRSHPNIIRLLEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR---  139 (370)
T ss_pred             chhhHHHHHHHHHhccCCCEeEEEEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC---
Confidence            345557999999999 9999999999999999999999999999999998889999999999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+|++++.+.         .++||+|||++...
T Consensus       140 ------------------------------gi~HRDLK~ENilld~~~---------~~~Kl~DFG~s~~~  171 (370)
T KOG0583|consen  140 ------------------------------GIVHRDLKPENILLDGNE---------GNLKLSDFGLSAIS  171 (370)
T ss_pred             ------------------------------CEeeCCCCHHHEEecCCC---------CCEEEecccccccc
Confidence                                          689999999999998541         48999999999755

>KOG0605|consensus

Probab=99.78  E-value=4.1e-19  Score=140.31  Aligned_cols=104  Identities=33%  Similarity=0.553  Sum_probs=91.6

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         12 TRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                      -+.|-.+|....+|.||+|+.+|++...+||+|||++|||+...+...+.+++...+.++.+.+-++..+|..       
T Consensus       188 V~aERdiL~~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~-------  260 (550)
T KOG0605|consen  188 VRAERDILAEVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL-------  260 (550)
T ss_pred             HHHHHHHhhhcCCCcEEEEEEEecCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc-------
Confidence            3445556666899999999999999999999999999999999999999999999999999999888877642       


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                ++|||||||+|+|++.+          +++||+|||++..+
T Consensus       261 --------------------------gyIHRDIKPdNlLiD~~----------GHiKLSDFGLs~gl  291 (550)
T KOG0605|consen  261 --------------------------GYIHRDIKPDNLLIDAK----------GHIKLSDFGLSTGL  291 (550)
T ss_pred             --------------------------CcccccCChhheeecCC----------CCEeeccccccchh
Confidence                                      78999999999999855          49999999998644

>KOG0588|consensus

Probab=99.78  E-value=1.8e-19  Score=145.40  Aligned_cols=111  Identities=40%  Similarity=0.620  Sum_probs=98.6

Q ss_pred             cchhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          4 QSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         4 ~~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      .+++.....-.|+-+++-+.|||+++++++++....+|+|.||++||.|.+++..+|.+++.+...++.|++.++.++|.
T Consensus        51 ~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~  130 (786)
T KOG0588|consen   51 LSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHA  130 (786)
T ss_pred             cccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhh
Confidence            44555556667899999999999999999999999999999999999999999999999999999999999999988764


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      .                                 +++|||+||+|++++.+          .++||+|||+|..
T Consensus       131 ~---------------------------------~icHRDLKpENlLLd~~----------~nIKIADFGMAsL  161 (786)
T KOG0588|consen  131 F---------------------------------NICHRDLKPENLLLDVK----------NNIKIADFGMASL  161 (786)
T ss_pred             h---------------------------------cceeccCCchhhhhhcc----------cCEeeeccceeec
Confidence            2                                 58999999999999843          3599999999963

>KOG1187|consensus

Probab=99.78  E-value=5.5e-19  Score=137.90  Aligned_cols=111  Identities=31%  Similarity=0.375  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCC-cEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQ-HVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~-~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ...+.+|++++.+++|||+|+|+|+|.+.+ ..++|+||+++|+|.+.+....  .+++.....+..+++.++.++|.. 
T Consensus       115 ~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~-  193 (361)
T KOG1187|consen  115 EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEG-  193 (361)
T ss_pred             hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccC-
Confidence            445999999999999999999999999888 4999999999999999887654  678888888888888888877631 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                   .-+.++|||+||+|||++.++          ..||+|||+|+..+
T Consensus       194 -----------------------------~~~~iiHrDiKssNILLD~~~----------~aKlsDFGLa~~~~  228 (361)
T KOG1187|consen  194 -----------------------------CPPPIIHRDIKSSNILLDEDF----------NAKLSDFGLAKLGP  228 (361)
T ss_pred             -----------------------------CCCCEecCCCCHHHeeECCCC----------CEEccCccCcccCC
Confidence                                         113689999999999998655          89999999997543

>KOG0600|consensus

Probab=99.78  E-value=9.3e-19  Score=137.58  Aligned_cols=107  Identities=35%  Similarity=0.576  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ..-+..|+.||++|.||||++|.+...+.  +.+|+|+||++. ||.-.+... -.+++..+.-++.|++.++.++|.. 
T Consensus       160 ~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~-  237 (560)
T KOG0600|consen  160 PITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR-  237 (560)
T ss_pred             hHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc-
Confidence            34456799999999999999999977766  799999999976 555554432 3578999999999999999887753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      +++|||||.+|+|++.          ++.+||+|||+|++.+
T Consensus       238 --------------------------------gvlHRDIK~SNiLidn----------~G~LKiaDFGLAr~y~  269 (560)
T KOG0600|consen  238 --------------------------------GVLHRDIKGSNILIDN----------NGVLKIADFGLARFYT  269 (560)
T ss_pred             --------------------------------CeeeccccccceEEcC----------CCCEEeccccceeecc
Confidence                                            7899999999999984          4589999999999764

>KOG0593|consensus

Probab=99.77  E-value=1.1e-19  Score=135.60  Aligned_cols=110  Identities=28%  Similarity=0.516  Sum_probs=91.2

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .--.-+.+|++.|++++|||+|.|+++|.....+++|+||+...-|...-..-..+++..+..++.|++.++.++|.+  
T Consensus        43 ~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~--  120 (396)
T KOG0593|consen   43 VVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN--  120 (396)
T ss_pred             HHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc--
Confidence            334567889999999999999999999999999999999998765544322233467888889999999998877653  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                     .+||||+||+||+++.++          .+|++|||+||-+.
T Consensus       121 -------------------------------n~IHRDIKPENILit~~g----------vvKLCDFGFAR~L~  152 (396)
T KOG0593|consen  121 -------------------------------NCIHRDIKPENILITQNG----------VVKLCDFGFARTLS  152 (396)
T ss_pred             -------------------------------CeecccCChhheEEecCC----------cEEeccchhhHhhc
Confidence                                           589999999999999654          89999999999764

>KOG0194|consensus

Probab=99.76  E-value=1.3e-18  Score=138.29  Aligned_cols=112  Identities=31%  Similarity=0.466  Sum_probs=99.5

Q ss_pred             ccchhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHh
Q psy11428          3 TQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         3 ~~~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      ..+..++..+++|.+++++++|||||+++|+...+.+++++||+++||+|.+++...+ .++..+...++.++..++.++
T Consensus       199 ~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YL  278 (474)
T KOG0194|consen  199 ELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYL  278 (474)
T ss_pred             cccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHH
Confidence            3567889999999999999999999999999999999999999999999999998765 488888888899999999887


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      |..                                 .+|||||.++|+|++.+          ..+|++|||+++.
T Consensus       279 h~k---------------------------------~~IHRDIAARNcL~~~~----------~~vKISDFGLs~~  311 (474)
T KOG0194|consen  279 HSK---------------------------------NCIHRDIAARNCLYSKK----------GVVKISDFGLSRA  311 (474)
T ss_pred             HHC---------------------------------CCcchhHhHHHheecCC----------CeEEeCccccccC
Confidence            753                                 58999999999999854          3689999999875

>KOG0198|consensus

Probab=99.76  E-value=2e-18  Score=131.54  Aligned_cols=108  Identities=35%  Similarity=0.563  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCC--cEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQ--HVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~--~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      +....+|+++|++++|||||++++......  .+++.|||+++|++.+++...+ .+++..++.+..++++++.++|.. 
T Consensus        58 ~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~-  136 (313)
T KOG0198|consen   58 SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK-  136 (313)
T ss_pred             HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            455789999999999999999999755444  6999999999999999988766 689999999999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+||||+|+|++..         ++.+||+|||+++.+
T Consensus       137 --------------------------------g~vH~DiK~~NiLl~~~---------~~~~KlaDFG~a~~~  168 (313)
T KOG0198|consen  137 --------------------------------GIVHCDIKPANILLDPS---------NGDVKLADFGLAKKL  168 (313)
T ss_pred             --------------------------------CEeccCcccceEEEeCC---------CCeEEeccCcccccc
Confidence                                            68999999999999852         248999999998754

>KOG0033|consensus

Probab=99.75  E-value=6.3e-19  Score=128.44  Aligned_cols=118  Identities=31%  Similarity=0.470  Sum_probs=102.5

Q ss_pred             cccchhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          2 ATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         2 ~~~~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      +-+|.++......|.+|.+.|+||||++|.+++.+.+..|+|+|++.|+++..-++.+...++...-.+++|+++++.++
T Consensus        47 ~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yC  126 (355)
T KOG0033|consen   47 KKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYC  126 (355)
T ss_pred             hhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            34667777888899999999999999999999999999999999999999988777777778888888999999999988


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                      |.+                                 +++|||+||.|+++.+.       ++...+|++|||+|..+.
T Consensus       127 H~n---------------------------------~IvHRDvkP~nllLASK-------~~~A~vKL~~FGvAi~l~  164 (355)
T KOG0033|consen  127 HSN---------------------------------GIVHRDLKPENLLLASK-------AKGAAVKLADFGLAIEVN  164 (355)
T ss_pred             Hhc---------------------------------CceeccCChhheeeeec-------cCCCceeecccceEEEeC
Confidence            764                                 68999999999999743       456678999999986543

>KOG0585|consensus

Probab=99.74  E-value=9.9e-18  Score=131.25  Aligned_cols=108  Identities=36%  Similarity=0.613  Sum_probs=89.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      -+..-++|+++|++|+|||||+|+++.-+.  ..+|+|+||++.|.+...-..+-.+.+.+.+.++..++.++.++|-  
T Consensus       151 ~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~--  228 (576)
T KOG0585|consen  151 PIEKVRREIAILKKLHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHY--  228 (576)
T ss_pred             cHHHHHHHHHHHHhcCCcCeeEEEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHh--
Confidence            456789999999999999999999988655  6799999999988876443223237788899999999999988774  


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     .++|||||||+|+|++.+          +.+||+|||.+-..
T Consensus       229 -------------------------------QgiiHRDIKPsNLLl~~~----------g~VKIsDFGVs~~~  260 (576)
T KOG0585|consen  229 -------------------------------QGIIHRDIKPSNLLLSSD----------GTVKISDFGVSNEF  260 (576)
T ss_pred             -------------------------------cCeeccccchhheEEcCC----------CcEEeeccceeeec
Confidence                                           279999999999999854          48999999987543

>KOG1026|consensus

Probab=99.74  E-value=5.1e-18  Score=139.96  Aligned_cols=107  Identities=30%  Similarity=0.479  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecC--------------CCHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT--------------LSEDTIRIFLKQ   73 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~--------------~~~~~~~~~~~~   73 (160)
                      .=..|++|++.+..++|||||+|+|++...++.|+|+||+..|||.++++.+++              ++..+...+..|
T Consensus       532 ~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~Q  611 (774)
T KOG1026|consen  532 ARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQ  611 (774)
T ss_pred             HHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHH
Confidence            446799999999999999999999999999999999999999999999875432              445566667778


Q ss_pred             HHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeee
Q psy11428         74 IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG  153 (160)
Q Consensus        74 ~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg  153 (160)
                      ++.++.++...                                 +++||||.++|+|++.+          ..+||+|||
T Consensus       612 IAaGM~YLs~~---------------------------------~FVHRDLATRNCLVge~----------l~VKIsDfG  648 (774)
T KOG1026|consen  612 IAAGMEYLSSH---------------------------------HFVHRDLATRNCLVGEN----------LVVKISDFG  648 (774)
T ss_pred             HHHHHHHHHhC---------------------------------cccccchhhhhceeccc----------eEEEecccc
Confidence            87777665432                                 57999999999999854          489999999


Q ss_pred             cccc
Q psy11428        154 FARF  157 (160)
Q Consensus       154 ~a~~  157 (160)
                      ++|.
T Consensus       649 LsRd  652 (774)
T KOG1026|consen  649 LSRD  652 (774)
T ss_pred             cchh
Confidence            9984

>KOG0586|consensus

Probab=99.73  E-value=7.3e-18  Score=134.94  Aligned_cols=109  Identities=41%  Similarity=0.707  Sum_probs=97.1

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...-...|+.+++.|+|||||+++.+..++..+|+|+||+.+|.+.+|+++++++.+...+....|+..++.++|..   
T Consensus        98 ~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k---  174 (596)
T KOG0586|consen   98 KRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK---  174 (596)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhc---
Confidence            33447889999999999999999999999999999999999999999999999999988888999999998887653   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                    .++|||||++|++++.          +.++||+|||++.++.
T Consensus       175 ------------------------------~ivHrdLk~eNilL~~----------~mnikIaDfgfS~~~~  206 (596)
T KOG0586|consen  175 ------------------------------NIVHRDLKAENILLDE----------NMNIKIADFGFSTFFD  206 (596)
T ss_pred             ------------------------------ceeccccchhhccccc----------ccceeeeccccceeec
Confidence                                          5799999999999974          3479999999998764

>KOG0610|consensus

Probab=99.73  E-value=1e-17  Score=129.14  Aligned_cols=108  Identities=30%  Similarity=0.464  Sum_probs=95.5

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ...+.+++-|-+||+.+.||.+++|++.|++....|++||||+||+|......  .+.+++..++.+..+++-++.++|.
T Consensus       118 rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHm  197 (459)
T KOG0610|consen  118 RKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHM  197 (459)
T ss_pred             hhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHh
Confidence            45678889999999999999999999999999999999999999999765443  3578999999999999999998875


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                       .++|+||+||+|||+-.+|          ++.|+||-++.
T Consensus       198 ---------------------------------lGivYRDLKPENILvredG----------HIMLsDFDLS~  227 (459)
T KOG0610|consen  198 ---------------------------------LGIVYRDLKPENILVREDG----------HIMLSDFDLSL  227 (459)
T ss_pred             ---------------------------------hceeeccCCcceeEEecCC----------cEEeeeccccc
Confidence                                             4899999999999998554          89999998874

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.72  E-value=1.3e-17  Score=130.70  Aligned_cols=107  Identities=34%  Similarity=0.547  Sum_probs=94.2

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+...++|+++++.++||||+++++++.+....|+++||+++|+|..++...+.+++.....+..+++.++.++|..  
T Consensus        43 ~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~--  120 (377)
T cd05629          43 DQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL--  120 (377)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            345567889999999999999999999999999999999999999988877667788888888999999999988753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                     +++||||||+||+++.+          +.++++|||+++
T Consensus       121 -------------------------------givHrDlkp~NIll~~~----------~~~kl~DfGla~  149 (377)
T cd05629         121 -------------------------------GFIHRDIKPDNILIDRG----------GHIKLSDFGLST  149 (377)
T ss_pred             -------------------------------CeeccCCCHHHEEECCC----------CCEEEeeccccc
Confidence                                           68999999999999744          378999999986

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0584|consensus

Probab=99.72  E-value=7.6e-18  Score=135.19  Aligned_cols=116  Identities=25%  Similarity=0.427  Sum_probs=102.7

Q ss_pred             ccchhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCc--EEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428          3 TQSKSSIVLTRHILKELTELHHENVVELLHCKESDQH--VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         3 ~~~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~--~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      ++++..+.++..|++.|+.|+||||+++++++.+...  +.+++|+++.|+|..|.++++.+....+..|+++|++++.+
T Consensus        79 ~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~y  158 (632)
T KOG0584|consen   79 TQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVY  158 (632)
T ss_pred             hcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhh
Confidence            4567778999999999999999999999998886654  88999999999999999988999999999999999999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..   +                            +++||||||-+||+++.+.         +.+||+|+|+|..+
T Consensus       159 LHs~---~----------------------------PPIIHRDLKCDNIFinG~~---------G~VKIGDLGLAtl~  196 (632)
T KOG0584|consen  159 LHSQ---D----------------------------PPIIHRDLKCDNIFVNGNL---------GEVKIGDLGLATLL  196 (632)
T ss_pred             hhcC---C----------------------------CCccccccccceEEEcCCc---------CceeecchhHHHHh
Confidence            8863   3                            4799999999999998655         47899999999754

>KOG0589|consensus

Probab=99.72  E-value=5.6e-18  Score=132.79  Aligned_cols=115  Identities=33%  Similarity=0.556  Sum_probs=99.9

Q ss_pred             cccchhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCc-EEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHH
Q psy11428          2 ATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQH-VYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         2 ~~~~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~-~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~   78 (160)
                      +++++..=..+.+|..++++++|||||.+.++|..++. +|++|+|+.||++.+.+..+.  .+++..+..++.|++.++
T Consensus        40 ~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av  119 (426)
T KOG0589|consen   40 EKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAV  119 (426)
T ss_pred             cccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHH
Confidence            45666666689999999999999999999999999998 999999999999999876543  478889999999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .++|..                                 .++|||+|+.|++++++.          .++++|||+|+.+
T Consensus       120 ~ylH~~---------------------------------~iLHRDlK~~Nifltk~~----------~VkLgDfGlaK~l  156 (426)
T KOG0589|consen  120 NYLHEN---------------------------------RVLHRDLKCANIFLTKDK----------KVKLGDFGLAKIL  156 (426)
T ss_pred             HHHHhh---------------------------------hhhcccchhhhhhccccC----------ceeecchhhhhhc
Confidence            988743                                 589999999999999643          5799999999865


Q ss_pred             C
Q psy11428        159 Q  159 (160)
Q Consensus       159 ~  159 (160)
                      .
T Consensus       157 ~  157 (426)
T KOG0589|consen  157 N  157 (426)
T ss_pred             C
Confidence            4

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.72  E-value=2.3e-17  Score=129.59  Aligned_cols=108  Identities=26%  Similarity=0.488  Sum_probs=94.6

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+..+++|+.+++.++||||+++++++.+++..|+++||+++|++..++...+.+++.....++.+++.++.++|..  
T Consensus        43 ~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~--  120 (381)
T cd05626          43 NQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM--  120 (381)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            345567889999999999999999999999999999999999999988877777788888888999999999988752  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++||||||+||+++.+          +.++|+|||+++.
T Consensus       121 -------------------------------givHrDlKp~Nili~~~----------~~~kL~DFGl~~~  150 (381)
T cd05626         121 -------------------------------GFIHRDIKPDNILIDLD----------GHIKLTDFGLCTG  150 (381)
T ss_pred             -------------------------------CeeecCCcHHHEEECCC----------CCEEEeeCcCCcc
Confidence                                           68999999999999743          3789999999754

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.72  E-value=1.8e-17  Score=129.39  Aligned_cols=108  Identities=31%  Similarity=0.515  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .....+.|..+++.++||+|+++++++.+....|++|||+++|++..++...+.+++.....+..+++.++.++|..   
T Consensus        44 ~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---  120 (363)
T cd05628          44 QVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL---  120 (363)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            34567788999999999999999999999999999999999999988887777889999999999999999987742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       121 ------------------------------givHrDlKp~NILi~~~----------~~vkL~DFGla~~~  151 (363)
T cd05628         121 ------------------------------GFIHRDIKPDNLLLDSK----------GHVKLSDFGLCTGL  151 (363)
T ss_pred             ------------------------------CeEecCCCHHHeEECCC----------CCEEEeeccCcccc
Confidence                                          68999999999999754          37899999998643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.71  E-value=1.9e-17  Score=127.60  Aligned_cols=108  Identities=31%  Similarity=0.556  Sum_probs=94.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+..|+.+++.++||||+++++++.+.+..|+++||++++++..++...+.+++.....+..+++.++.++|..   
T Consensus        61 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---  137 (329)
T PTZ00263         61 QVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK---  137 (329)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            45567889999999999999999999999999999999999999988877777788888888999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++||||||+||+++.+          +.++|+|||+++.+
T Consensus       138 ------------------------------~ivH~dlkp~NIll~~~----------~~~kl~Dfg~~~~~  168 (329)
T PTZ00263        138 ------------------------------DIIYRDLKPENLLLDNK----------GHVKVTDFGFAKKV  168 (329)
T ss_pred             ------------------------------CeeecCCCHHHEEECCC----------CCEEEeeccCceEc
Confidence                                          68999999999999854          37899999998754

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.71  E-value=2e-17  Score=128.21  Aligned_cols=108  Identities=31%  Similarity=0.470  Sum_probs=94.6

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+..|.++++.++||||+++++++.+++..|+++||+++|++..++...+.+++.....+..+++.++.++|..   
T Consensus        74 ~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~---  150 (340)
T PTZ00426         74 QVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL---  150 (340)
T ss_pred             hHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34556789999999999999999999999999999999999999988887777788888889999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       151 ------------------------------~ivHrDLkp~NILl~~~----------~~ikL~DFG~a~~~  181 (340)
T PTZ00426        151 ------------------------------NIVYRDLKPENLLLDKD----------GFIKMTDFGFAKVV  181 (340)
T ss_pred             ------------------------------CeEccCCCHHHEEECCC----------CCEEEecCCCCeec
Confidence                                          68999999999999744          37899999998754

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.71  E-value=2.7e-17  Score=125.81  Aligned_cols=109  Identities=28%  Similarity=0.485  Sum_probs=95.2

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ...+..+..|+++++.++||||+++++++...+..|+++||+++|++..++...+.+++.....+..+++.++.++|.. 
T Consensus        34 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-  112 (312)
T cd05585          34 RSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKF-  112 (312)
T ss_pred             hhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            3445667789999999999999999999999999999999999999988877777788889999999999999988753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++|||+||+||+++.+          +.++++|||+++.
T Consensus       113 --------------------------------~i~HrDlkp~Nili~~~----------~~~kl~Dfg~~~~  142 (312)
T cd05585         113 --------------------------------NVIYRDLKPENILLDYQ----------GHIALCDFGLCKL  142 (312)
T ss_pred             --------------------------------CeEeCCCCHHHeEECCC----------CcEEEEECccccc
Confidence                                            68999999999999754          3789999999874

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.71  E-value=2.3e-17  Score=129.44  Aligned_cols=107  Identities=28%  Similarity=0.534  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .+...+.|+++++.++||||+++++++.+.+.+|+||||+++|++...+...+.+++..+..++.+++.++.++|..   
T Consensus        44 ~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~---  120 (382)
T cd05625          44 QVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM---  120 (382)
T ss_pred             HHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            45567789999999999999999999999999999999999999988876667788888888999999999988752   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++||||||+||+++.+          +.++|+|||+++.
T Consensus       121 ------------------------------~ivHrDlKp~NILl~~~----------g~~kL~DFGla~~  150 (382)
T cd05625         121 ------------------------------GFIHRDIKPDNILIDRD----------GHIKLTDFGLCTG  150 (382)
T ss_pred             ------------------------------CeecCCCCHHHEEECCC----------CCEEEeECCCCcc
Confidence                                          68999999999999754          3799999999753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.71  E-value=2.3e-17  Score=126.79  Aligned_cols=108  Identities=30%  Similarity=0.422  Sum_probs=94.2

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+..+..|+++++.++||||+++.+++..++..|++|||++++++..++...+.+++.....+..+++.++.++|..  
T Consensus        37 ~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~--  114 (323)
T cd05571          37 DEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSC--  114 (323)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            344566788999999999999999999999999999999999999988776667788889999999999999988753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++||||||+||+++.+          +.++|+|||+++.
T Consensus       115 -------------------------------~ivHrDlkp~NIll~~~----------~~~kl~DfG~a~~  144 (323)
T cd05571         115 -------------------------------DVVYRDLKLENLMLDKD----------GHIKITDFGLCKE  144 (323)
T ss_pred             -------------------------------CeEeCCCCHHHEEECCC----------CCEEEeeCCCCcc
Confidence                                           68999999999999754          3789999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.71  E-value=2.8e-17  Score=128.70  Aligned_cols=106  Identities=28%  Similarity=0.546  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .....+.|+++++.++||||+++++.+.+++..|++|||+++|+|..++...+.+++.....++.+++.++.++|..   
T Consensus        44 ~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---  120 (376)
T cd05598          44 QAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM---  120 (376)
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34556789999999999999999999999999999999999999998887777788888888899999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                    +++||||||+||+++.+          +.++|+|||+|.
T Consensus       121 ------------------------------~ivHrDlkp~Nill~~~----------~~ikL~DFG~a~  149 (376)
T cd05598         121 ------------------------------GFIHRDIKPDNILIDRD----------GHIKLTDFGLCT  149 (376)
T ss_pred             ------------------------------CeEeCCCCHHHEEECCC----------CCEEEEeCCCCc
Confidence                                          68999999999999744          378999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG0659|consensus

Probab=99.70  E-value=2.7e-17  Score=120.74  Aligned_cols=105  Identities=38%  Similarity=0.569  Sum_probs=90.8

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      .+-+|+..|+.++||||+.+.++|...+-+-+|+||++ .+|...++.+. .++...+..+..+.+.++.++|..     
T Consensus        47 talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~-----  120 (318)
T KOG0659|consen   47 TALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK-----  120 (318)
T ss_pred             HHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh-----
Confidence            45679999999999999999999999999999999996 47777776654 468888999999999999988754     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                  -++|||+||.|+|+++++          .+|++|||+||++.
T Consensus       121 ----------------------------~IlHRDlKPnNLLis~~g----------~lKiADFGLAr~f~  152 (318)
T KOG0659|consen  121 ----------------------------WILHRDLKPNNLLISSDG----------QLKIADFGLARFFG  152 (318)
T ss_pred             ----------------------------hhhcccCCccceEEcCCC----------cEEeecccchhccC
Confidence                                        479999999999998654          89999999999764

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.70  E-value=2.8e-17  Score=128.03  Aligned_cols=109  Identities=29%  Similarity=0.530  Sum_probs=95.7

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+++|+++++.++||||+++++++.++...|+++||+++|+|..++...+.+++..+..++.+++.++.++|..  
T Consensus        43 ~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~--  120 (364)
T cd05599          43 EQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL--  120 (364)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            344567789999999999999999999999999999999999999988877777789999999999999999988753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++||||||+||+++.+          +.++++|||+++.+
T Consensus       121 -------------------------------~ivH~Dlkp~NIl~~~~----------~~~kl~Dfg~~~~~  151 (364)
T cd05599         121 -------------------------------GYIHRDIKPDNLLLDAK----------GHIKLSDFGLCTGL  151 (364)
T ss_pred             -------------------------------CeEeccCCHHHeEECCC----------CCEEEeecccceec
Confidence                                           68999999999999754          37899999998643

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.70  E-value=6.1e-17  Score=126.17  Aligned_cols=108  Identities=32%  Similarity=0.547  Sum_probs=94.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .....+.|..++..++||+++++++.+.+...+|++|||+++|++..++...+.+++.....++.+++.++.++|..   
T Consensus        44 ~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~---  120 (360)
T cd05627          44 QVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL---  120 (360)
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            45567789999999999999999999999999999999999999998877777889999999999999999988752   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++||||||+||+++.+          +.++|+|||+++.+
T Consensus       121 ------------------------------givHrDLkp~NIli~~~----------~~vkL~DfG~~~~~  151 (360)
T cd05627         121 ------------------------------GFIHRDIKPDNLLLDAK----------GHVKLSDFGLCTGL  151 (360)
T ss_pred             ------------------------------CeEccCCCHHHEEECCC----------CCEEEeeccCCccc
Confidence                                          68999999999999744          37899999998644

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0578|consensus

Probab=99.70  E-value=2.6e-17  Score=130.76  Aligned_cols=106  Identities=33%  Similarity=0.592  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      .+.-+|+.+++..+|+|||.++++|...+.+|.||||+.||+|.+.+. +..+.+..++.++.+.++++.++|..     
T Consensus       315 eLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsLTDvVt-~~~~~E~qIA~Icre~l~aL~fLH~~-----  388 (550)
T KOG0578|consen  315 ELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSLTDVVT-KTRMTEGQIAAICREILQGLKFLHAR-----  388 (550)
T ss_pred             hhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCchhhhhh-cccccHHHHHHHHHHHHHHHHHHHhc-----
Confidence            345679999999999999999999999999999999999999888764 45688999999999999999988753     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                  +++|||||.+||+++.++          .+||+||||++.+.
T Consensus       389 ----------------------------gIiHrDIKSDnILL~~~g----------~vKltDFGFcaqi~  420 (550)
T KOG0578|consen  389 ----------------------------GIIHRDIKSDNILLTMDG----------SVKLTDFGFCAQIS  420 (550)
T ss_pred             ----------------------------ceeeeccccceeEeccCC----------cEEEeeeeeeeccc
Confidence                                        789999999999998654          79999999998764

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.70  E-value=3.6e-17  Score=125.77  Aligned_cols=108  Identities=27%  Similarity=0.436  Sum_probs=93.4

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+..+..|+++++.++||||+++++++..++..|+++||++++++..++...+.+++.....+..+++.++.++|..  
T Consensus        37 ~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--  114 (323)
T cd05595          37 DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--  114 (323)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            344566778999999999999999999999999999999999999987766666788889999999999999988753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++||||||+||+++.+          +.++|+|||+++.
T Consensus       115 -------------------------------~ivH~Dlkp~NIll~~~----------~~~kL~Dfg~~~~  144 (323)
T cd05595         115 -------------------------------DVVYRDIKLENLMLDKD----------GHIKITDFGLCKE  144 (323)
T ss_pred             -------------------------------CeEecCCCHHHEEEcCC----------CCEEecccHHhcc
Confidence                                           68999999999999744          3789999998764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.69  E-value=7.8e-17  Score=123.89  Aligned_cols=109  Identities=29%  Similarity=0.431  Sum_probs=93.4

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+.....|+++++.++||||+++.+++..++..|+||||++++++..++...+.+++.....+..+++.++.++|..  
T Consensus        37 ~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~--  114 (325)
T cd05594          37 DEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--  114 (325)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhc--
Confidence            345566778899999999999999999999999999999999999987776667788889999999999999987631  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    .+++||||||+||+++.+          +.++|+|||+++.
T Consensus       115 ------------------------------~~ivHrDikp~NIll~~~----------~~~kL~Dfg~~~~  145 (325)
T cd05594         115 ------------------------------KNVVYRDLKLENLMLDKD----------GHIKITDFGLCKE  145 (325)
T ss_pred             ------------------------------CCEEecCCCCCeEEECCC----------CCEEEecCCCCee
Confidence                                          158999999999999754          3799999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.69  E-value=1.2e-16  Score=129.11  Aligned_cols=108  Identities=31%  Similarity=0.492  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe----eecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ....++.|+++++.++||||+++++.+..++..|++|||+++|+|..++.    ....+++.....+..+++.++.++|.
T Consensus       108 ~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~  187 (478)
T PTZ00267        108 QAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHS  187 (478)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            34567789999999999999999999999999999999999999976543    23457888888888999999988774


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++||||||+||+++.+          ..++|+|||+++.+
T Consensus       188 ~---------------------------------~ivHrDlkp~NIll~~~----------~~~kL~DFgla~~~  219 (478)
T PTZ00267        188 R---------------------------------KMMHRDLKSANIFLMPT----------GIIKLGDFGFSKQY  219 (478)
T ss_pred             C---------------------------------CEEECCcCHHhEEECCC----------CcEEEEeCcCceec
Confidence            2                                 68999999999999854          37899999998754

>KOG0594|consensus

Probab=99.69  E-value=6.5e-17  Score=122.41  Aligned_cols=102  Identities=39%  Similarity=0.614  Sum_probs=86.3

Q ss_pred             HHHHHHHHhhcCCcc-eEEEeeeeecCC------cEEEEEEEeCCCceeEEEeeec----CCCHHHHHHHHHHHHHHHHH
Q psy11428         12 TRHILKELTELHHEN-VVELLHCKESDQ------HVYLVMEFCNGGDLADYLVSKG----TLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~-iv~l~~~~~~~~------~~~lv~e~~~~g~l~~~l~~~~----~~~~~~~~~~~~~~~~~~~~   80 (160)
                      +..|+.+|++|+|+| |++|++++.+..      .+++++|+.. .++..++....    ..+...++.++.|++.++.+
T Consensus        57 aiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~  135 (323)
T KOG0594|consen   57 AIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF  135 (323)
T ss_pred             hhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence            456889999999999 999999998777      8999999984 57777765433    46677899999999999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +|..                                 +++|||+||+|++++++          +.+|++|||+||-
T Consensus       136 ~H~~---------------------------------~IlHRDLKPQNlLi~~~----------G~lKlaDFGlAra  169 (323)
T KOG0594|consen  136 LHSH---------------------------------GILHRDLKPQNLLISSS----------GVLKLADFGLARA  169 (323)
T ss_pred             HHhC---------------------------------CeecccCCcceEEECCC----------CcEeeeccchHHH
Confidence            8764                                 68999999999999864          3889999999974

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.69  E-value=5.2e-17  Score=125.22  Aligned_cols=108  Identities=31%  Similarity=0.445  Sum_probs=93.8

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+..+..|+++++.++||||+++.+++...+..|+||||++++++..++...+.+++.....+..+++.++.++|..  
T Consensus        37 ~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~--  114 (328)
T cd05593          37 DEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG--  114 (328)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            345567788999999999999999999999999999999999999987776667788888889999999999988753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++||||||+||+++.+          +.++|+|||+++.
T Consensus       115 -------------------------------~ivHrDikp~NIll~~~----------~~~kL~DfG~~~~  144 (328)
T cd05593         115 -------------------------------KIVYRDLKLENLMLDKD----------GHIKITDFGLCKE  144 (328)
T ss_pred             -------------------------------CeEecccCHHHeEECCC----------CcEEEecCcCCcc
Confidence                                           68999999999999754          3789999999864

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.69  E-value=2.5e-17  Score=124.82  Aligned_cols=108  Identities=35%  Similarity=0.587  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++||||+++++.+.+....|+++||++++++.+++...+.+++.....+..+++.++.++|..   
T Consensus        44 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---  120 (291)
T cd05612          44 QEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---  120 (291)
T ss_pred             HHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34567789999999999999999999999999999999999999988887777788888888999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++||||||+||+++.+          +.++++|||+++.+
T Consensus       121 ------------------------------~i~H~dlkp~NIli~~~----------~~~kl~Dfg~~~~~  151 (291)
T cd05612         121 ------------------------------EIVYRDLKPENILLDKE----------GHIKLTDFGFAKKL  151 (291)
T ss_pred             ------------------------------CeeecCCCHHHeEECCC----------CCEEEEecCcchhc
Confidence                                          68999999999999754          37899999998754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0694|consensus

Probab=99.69  E-value=2.2e-16  Score=127.98  Aligned_cols=107  Identities=29%  Similarity=0.491  Sum_probs=88.1

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      +.+...+.|-+|+.-. +||.++.|+++|++...+|.||||+.||++. .+...+.+++...+.+..+++.+++++|.+ 
T Consensus       410 d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fvmey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~-  487 (694)
T KOG0694|consen  410 DEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFVMEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHEN-  487 (694)
T ss_pred             ccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEEEEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhc-
Confidence            3444444455554433 6999999999999999999999999999944 344557899999999999999999998764 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      ++|+||+|.+|||++..          +.+||+|||+++.
T Consensus       488 --------------------------------~IIYRDlKLdNiLLD~e----------Gh~kiADFGlcKe  517 (694)
T KOG0694|consen  488 --------------------------------GIIYRDLKLDNLLLDTE----------GHVKIADFGLCKE  517 (694)
T ss_pred             --------------------------------CceeeecchhheEEccc----------CcEEecccccccc
Confidence                                            78999999999999854          4899999999974

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.69  E-value=6.9e-17  Score=123.77  Aligned_cols=106  Identities=31%  Similarity=0.543  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ......|++++++++||||+++++++.+++..|+++||++++++..++.....+++..+..+..+++.++.++|..    
T Consensus        42 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~----  117 (318)
T cd05582          42 RVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL----  117 (318)
T ss_pred             HHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            3456678999999999999999999999999999999999999988776666788999999999999999988753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   +++|||+||+||+++.+          ..++|+|||+++.
T Consensus       118 -----------------------------~i~H~dlkp~Nil~~~~----------~~~kL~Dfg~~~~  147 (318)
T cd05582         118 -----------------------------GIIYRDLKPENILLDEE----------GHIKLTDFGLSKE  147 (318)
T ss_pred             -----------------------------CEecCCCCHHHeEECCC----------CcEEEeeccCCcc
Confidence                                         58999999999999754          3789999999864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.69  E-value=6e-17  Score=124.52  Aligned_cols=105  Identities=32%  Similarity=0.537  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      .....|+++++.++||||+++++.+..++..|+++||++++++..++...+.+.+.....++.+++.++.++|..     
T Consensus        45 ~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-----  119 (323)
T cd05584          45 AHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ-----  119 (323)
T ss_pred             HHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            445679999999999999999999999999999999999999988776667778888888889999999887742     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                  +++|||+||+||+++.+          +.++|+|||+++.
T Consensus       120 ----------------------------~ivH~dlkp~Nil~~~~----------~~~kl~Dfg~~~~  149 (323)
T cd05584         120 ----------------------------GIIYRDLKPENILLDAQ----------GHVKLTDFGLCKE  149 (323)
T ss_pred             ----------------------------CeecCCCCHHHeEECCC----------CCEEEeeCcCCee
Confidence                                        68999999999999754          3789999999863

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0661|consensus

Probab=99.68  E-value=1.3e-17  Score=130.45  Aligned_cols=102  Identities=36%  Similarity=0.585  Sum_probs=86.7

Q ss_pred             HHHHHHhhcC-CcceEEEeeeeecCC-cEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         14 HILKELTELH-HENVVELLHCKESDQ-HVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        14 ~~~~~l~~l~-h~~iv~l~~~~~~~~-~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      +|+..|++|+ ||||+.+++++.+++ .+|+||||+. -+|.+.++.+ ..+++..++.++.|+++++.++|.+      
T Consensus        57 REvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md-~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~------  129 (538)
T KOG0661|consen   57 REVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD-CNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH------  129 (538)
T ss_pred             HHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh-hhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc------
Confidence            4677788998 999999999999988 9999999985 4666665544 5689999999999999999988753      


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                 ++.|||+||+|+|+..+          ..+||+|||+||.+.
T Consensus       130 ---------------------------GfFHRDlKPENiLi~~~----------~~iKiaDFGLARev~  161 (538)
T KOG0661|consen  130 ---------------------------GFFHRDLKPENILISGN----------DVIKIADFGLAREVR  161 (538)
T ss_pred             ---------------------------CcccccCChhheEeccc----------ceeEecccccccccc
Confidence                                       78999999999999843          379999999999654

>KOG0608|consensus

Probab=99.68  E-value=6.2e-17  Score=130.84  Aligned_cols=103  Identities=29%  Similarity=0.558  Sum_probs=90.1

Q ss_pred             HHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeE
Q psy11428         14 HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVE   93 (160)
Q Consensus        14 ~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~   93 (160)
                      .|-.||..-.++=||+|+.+|++.+.+|+||||++|||+...+...+.+++...+.++.++.-++..+|.          
T Consensus       678 AERDILAEADn~WVVrLyySFQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHk----------  747 (1034)
T KOG0608|consen  678 AERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHK----------  747 (1034)
T ss_pred             hhhhhHhhcCCcceEEEEEEeccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHh----------
Confidence            3455666678899999999999999999999999999999998999999999999999998888777653          


Q ss_pred             EeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         94 LLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        94 ~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                             +++|||||||+|||++.+          +++||.|||++..+.
T Consensus       748 -----------------------mGFIHRDiKPDNILIDrd----------GHIKLTDFGLCTGfR  780 (1034)
T KOG0608|consen  748 -----------------------MGFIHRDIKPDNILIDRD----------GHIKLTDFGLCTGFR  780 (1034)
T ss_pred             -----------------------ccceecccCccceEEccC----------Cceeeeeccccccce
Confidence                                   489999999999999854          489999999997554

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.68  E-value=8.3e-17  Score=124.07  Aligned_cols=108  Identities=33%  Similarity=0.545  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .......|+++++.++||||+++++++...+..|+++||+++++|..++...+.+++.....+..+++.++.++|..   
T Consensus        44 ~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---  120 (333)
T cd05600          44 EVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL---  120 (333)
T ss_pred             HHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34556788999999999999999999999999999999999999998887677788888888999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.+          ..++|+|||+++..
T Consensus       121 ------------------------------~ivH~dlkp~Nil~~~~----------~~~kL~Dfg~a~~~  151 (333)
T cd05600         121 ------------------------------GYIHRDLKPENFLIDAS----------GHIKLTDFGLSKGI  151 (333)
T ss_pred             ------------------------------CccccCCCHHHEEECCC----------CCEEEEeCcCCccc
Confidence                                          68999999999999754          37899999998754

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0032|consensus

Probab=99.68  E-value=1.3e-16  Score=125.31  Aligned_cols=112  Identities=38%  Similarity=0.616  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ......+|+++|+++. ||||+.+.++|++...+++|||++.||.+.+.+... .+++.....+..+++++++++|.   
T Consensus        78 ~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~---  153 (382)
T KOG0032|consen   78 DREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHS---  153 (382)
T ss_pred             cHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHh---
Confidence            3467789999999998 999999999999999999999999999999987766 48999999999999999998875   


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                    .+++|||+||+|+++....      +....++++|||++.+..
T Consensus       154 ------------------------------~gvvHrDlKpEN~L~~~~~------~~~~~ik~~DFGla~~~~  190 (382)
T KOG0032|consen  154 ------------------------------LGVVHRDLKPENLLLASKD------EGSGRIKLIDFGLAKFIK  190 (382)
T ss_pred             ------------------------------CCceeccCCHHHeeecccc------CCCCcEEEeeCCCceEcc
Confidence                                          2789999999999998542      223579999999997654

>KOG0597|consensus

Probab=99.68  E-value=2.3e-17  Score=131.71  Aligned_cols=109  Identities=39%  Similarity=0.628  Sum_probs=98.7

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ++..+...++|+++++.++||||+.+++.|+....+|+|.||+.| +|...+..-+.+++..++.+..+++.++.++|..
T Consensus        41 ~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~  119 (808)
T KOG0597|consen   41 NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSN  119 (808)
T ss_pred             chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            456788899999999999999999999999999999999999988 8888887778899999999999999999998764


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                       +++|||+||+||+++..          +.+|++|||+||-
T Consensus       120 ---------------------------------rilhrd~kPqniLl~~~----------~~~KlcdFg~Ar~  149 (808)
T KOG0597|consen  120 ---------------------------------RILHRDMKPQNILLEKG----------GTLKLCDFGLARA  149 (808)
T ss_pred             ---------------------------------CcccccCCcceeeecCC----------Cceeechhhhhhh
Confidence                                             68999999999999844          4899999999974

>KOG4721|consensus

Probab=99.67  E-value=6.3e-17  Score=129.47  Aligned_cols=101  Identities=30%  Similarity=0.496  Sum_probs=90.5

Q ss_pred             HHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEE
Q psy11428         15 ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVEL   94 (160)
Q Consensus        15 ~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   94 (160)
                      ++..|++|+||||+.+.++|....-.|++||||+.|.|...++....+....+..+.++|+.++.++|.+          
T Consensus       162 dIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h----------  231 (904)
T KOG4721|consen  162 DIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH----------  231 (904)
T ss_pred             hHHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh----------
Confidence            4555899999999999999998888999999999999999998888888889999999999999998864          


Q ss_pred             eeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         95 LHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        95 ~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                             ++||||+|..|||++.+.          .+||+|||.++-+
T Consensus       232 -----------------------KIIHRDLKSPNiLIs~~d----------~VKIsDFGTS~e~  262 (904)
T KOG4721|consen  232 -----------------------KIIHRDLKSPNILISYDD----------VVKISDFGTSKEL  262 (904)
T ss_pred             -----------------------hHhhhccCCCceEeeccc----------eEEeccccchHhh
Confidence                                   689999999999998543          8999999998754

>KOG0660|consensus

Probab=99.67  E-value=5.4e-17  Score=123.13  Aligned_cols=109  Identities=40%  Similarity=0.608  Sum_probs=92.9

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeec-----CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKES-----DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~-----~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      ....++-+|+++|+.++|+||+.+.+++..     -..+|+|+|++ +.||...++....+++...+.+.-|++.++++.
T Consensus        63 ~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyi  141 (359)
T KOG0660|consen   63 IDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYI  141 (359)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchh
Confidence            344567789999999999999999987765     46799999998 678888777666699999999999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                      |+.                                 .++|||+||.|++++.          +..+|++|||+||...
T Consensus       142 HSA---------------------------------nViHRDLKPsNll~n~----------~c~lKI~DFGLAR~~~  176 (359)
T KOG0660|consen  142 HSA---------------------------------NVIHRDLKPSNLLLNA----------DCDLKICDFGLARYLD  176 (359)
T ss_pred             hcc---------------------------------cccccccchhheeecc----------CCCEEeccccceeecc
Confidence            764                                 6899999999999984          3478999999999763

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.67  E-value=1.8e-16  Score=124.29  Aligned_cols=106  Identities=29%  Similarity=0.467  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+..|..+++.++||||+++++++..+...|+|+||+++|+|..++.. ..+++.....+..+++.++.++|..    
T Consensus        87 ~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~----  161 (370)
T cd05621          87 SAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSM----  161 (370)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            34567788999999999999999999999999999999999999887643 3577888888899999999988753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++||||||+||+++.+          +.+||+|||+++.+
T Consensus       162 -----------------------------~IvHrDLKp~NILl~~~----------~~~kL~DFG~a~~~  192 (370)
T cd05621         162 -----------------------------GLIHRDVKPDNMLLDKH----------GHLKLADFGTCMKM  192 (370)
T ss_pred             -----------------------------CeEecCCCHHHEEECCC----------CCEEEEecccceec
Confidence                                         68999999999999754          37999999998754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0582|consensus

Probab=99.67  E-value=1.3e-16  Score=124.12  Aligned_cols=107  Identities=29%  Similarity=0.489  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      +...++|+..++.++||||++++++|..+..+|+||.++.+|++.+-+..  ...+.+..+..+.++.++++.++|..  
T Consensus        68 ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~--  145 (516)
T KOG0582|consen   68 LDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN--  145 (516)
T ss_pred             HHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc--
Confidence            77889999999999999999999999999999999999999998775543  23488999999999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +.||||+|+.|||++.+|          .++|+|||.+..+
T Consensus       146 -------------------------------G~IHRdvKAgnILi~~dG----------~VkLadFgvsa~l  176 (516)
T KOG0582|consen  146 -------------------------------GHIHRDVKAGNILIDSDG----------TVKLADFGVSASL  176 (516)
T ss_pred             -------------------------------CceecccccccEEEcCCC----------cEEEcCceeeeee
Confidence                                           679999999999998654          8999999987543

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.67  E-value=3e-16  Score=119.32  Aligned_cols=110  Identities=29%  Similarity=0.446  Sum_probs=90.2

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-------------------cCCCHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-------------------GTLSEDT   66 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-------------------~~~~~~~   66 (160)
                      ++....+.+|+++++.++||||+++++++.+.+..++++||++++++..++...                   ..++...
T Consensus        60 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (304)
T cd05096          60 KNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSS  139 (304)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHH
Confidence            445567888999999999999999999999999999999999999987655321                   1235566


Q ss_pred             HHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCce
Q psy11428         67 IRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK  146 (160)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~  146 (160)
                      ...+..+++.++.++|..                                 +++|||+||+|++++.+          ..
T Consensus       140 ~~~i~~~i~~al~~lH~~---------------------------------~ivH~dlkp~Nill~~~----------~~  176 (304)
T cd05096         140 LLHVALQIASGMKYLSSL---------------------------------NFVHRDLATRNCLVGEN----------LT  176 (304)
T ss_pred             HHHHHHHHHHHHHHHHHC---------------------------------CccccCcchhheEEcCC----------cc
Confidence            778889999999988753                                 68999999999999854          37


Q ss_pred             EEEeeeeccccc
Q psy11428        147 LKIADFGFARFL  158 (160)
Q Consensus       147 ~~l~dfg~a~~~  158 (160)
                      ++|+|||+++.+
T Consensus       177 ~kl~DfG~~~~~  188 (304)
T cd05096         177 IKIADFGMSRNL  188 (304)
T ss_pred             EEECCCccceec
Confidence            899999998743

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.66  E-value=2.6e-16  Score=121.51  Aligned_cols=110  Identities=27%  Similarity=0.411  Sum_probs=93.8

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+..|+++++.++||||+++++++...+..|+++||+++++|..++...+.+++.....+..+++.++.++|..  
T Consensus        45 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~--  122 (333)
T cd06650          45 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--  122 (333)
T ss_pred             HHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc--
Confidence            345667899999999999999999999999999999999999999988876666788888888888999999887631  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    .+++|+|+||+|++++.+          +.++++|||+++.+
T Consensus       123 ------------------------------~~ivH~dlkp~Nili~~~----------~~~kL~Dfg~~~~~  154 (333)
T cd06650         123 ------------------------------HKIMHRDVKPSNILVNSR----------GEIKLCDFGVSGQL  154 (333)
T ss_pred             ------------------------------CCEEecCCChhhEEEcCC----------CCEEEeeCCcchhh
Confidence                                          147999999999999754          36899999998643

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.66  E-value=3.3e-16  Score=120.77  Aligned_cols=110  Identities=26%  Similarity=0.385  Sum_probs=94.2

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|+++++.++||||+++++++...+..++++||+++++|..++...+.+++.....+..+++.++.++|..  
T Consensus        45 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--  122 (331)
T cd06649          45 AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK--  122 (331)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc--
Confidence            345678889999999999999999999999999999999999999988876666788888888999999999887632  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    .+++|+|+||+||+++.+          +.++|+|||+++.+
T Consensus       123 ------------------------------~~ivH~dlkp~Nil~~~~----------~~~kl~Dfg~~~~~  154 (331)
T cd06649         123 ------------------------------HQIMHRDVKPSNILVNSR----------GEIKLCDFGVSGQL  154 (331)
T ss_pred             ------------------------------CCEEcCCCChhhEEEcCC----------CcEEEccCcccccc
Confidence                                          147999999999999854          37899999998654

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0580|consensus

Probab=99.66  E-value=8.7e-18  Score=121.69  Aligned_cols=104  Identities=32%  Similarity=0.568  Sum_probs=90.0

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe--eecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV--SKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.|++|=++|+||||+++++.|.+...+|+++||.+.|.+...+.  ..+.+.+.....++.|++.++.++|..    
T Consensus        68 qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k----  143 (281)
T KOG0580|consen   68 QLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLK----  143 (281)
T ss_pred             hhhheeEeecccCCccHHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccC----
Confidence            45667778889999999999999999999999999999999988777  456688888888999999999887643    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   .+||||+||+|+|++.++          .+|++|||.+..
T Consensus       144 -----------------------------~VIhRdiKpenlLlg~~~----------~lkiAdfGwsV~  173 (281)
T KOG0580|consen  144 -----------------------------RVIHRDIKPENLLLGSAG----------ELKIADFGWSVH  173 (281)
T ss_pred             -----------------------------CcccCCCCHHHhccCCCC----------CeeccCCCceee
Confidence                                         589999999999998654          789999998754

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.66  E-value=2.3e-16  Score=121.58  Aligned_cols=107  Identities=27%  Similarity=0.470  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .+...+.|..+++.+ +||||+++++++.+.+..|+++||++++++..++...+.+++.....+..+++.++.++|..  
T Consensus        38 ~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~--  115 (329)
T cd05588          38 DIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHER--  115 (329)
T ss_pred             HHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            445567788888888 79999999999999999999999999999987776667789999999999999999988753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++|||+||+||+++.+          ..++|+|||+++.
T Consensus       116 -------------------------------~ivH~dlkp~Nili~~~----------~~~kL~Dfg~~~~  145 (329)
T cd05588         116 -------------------------------GIIYRDLKLDNVLLDAE----------GHIKLTDYGMCKE  145 (329)
T ss_pred             -------------------------------CeEecCCCHHHeEECCC----------CCEEECcCccccc
Confidence                                           68999999999999754          3789999998863

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.66  E-value=3.2e-16  Score=120.71  Aligned_cols=106  Identities=26%  Similarity=0.449  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ......|+.+++.+ +||+|+++++++..++..++++||+++|++..++..++.+++..+..+..+++.++.++|..   
T Consensus        48 ~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---  124 (332)
T cd05614          48 VEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL---  124 (332)
T ss_pred             HHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            44567788999999 59999999999999999999999999999988877677788999999999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++||||||+||+++.+          +.++|+|||+++.
T Consensus       125 ------------------------------~ivHrDlkp~Nili~~~----------~~~kl~DfG~~~~  154 (332)
T cd05614         125 ------------------------------GIVYRDIKLENILLDSE----------GHVVLTDFGLSKE  154 (332)
T ss_pred             ------------------------------CcEecCCCHHHeEECCC----------CCEEEeeCcCCcc
Confidence                                          68999999999999754          3789999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PHA02988 hypothetical protein; Provisional

Probab=99.66  E-value=5.4e-16  Score=117.23  Aligned_cols=107  Identities=21%  Similarity=0.291  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeec----CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~----~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      +..+.+|++++++++||||+++++++.+    ....++++||+++|+|..++...+.++......+..+++.++.++|..
T Consensus        62 ~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~  141 (283)
T PHA02988         62 IDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY  141 (283)
T ss_pred             HHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            5678899999999999999999998866    457899999999999999887767778888888888999998887631


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      .+++|||+||+|++++.+          +.+|++|||+++.
T Consensus       142 --------------------------------~~~~Hrdlkp~nill~~~----------~~~kl~dfg~~~~  172 (283)
T PHA02988        142 --------------------------------TNKPYKNLTSVSFLVTEN----------YKLKIICHGLEKI  172 (283)
T ss_pred             --------------------------------CCCCCCcCChhhEEECCC----------CcEEEcccchHhh
Confidence                                            145799999999999854          3789999999874

>KOG1094|consensus

Probab=99.65  E-value=5.8e-17  Score=129.78  Aligned_cols=109  Identities=29%  Similarity=0.416  Sum_probs=91.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCC--CHHHHHHHHHHHHHHHHHhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL--SEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      .++--.+..|+++|.+|+||||++|+++|..++++|+++||+.+|||.+++.++..-  .......++.++..+++++..
T Consensus       576 ~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes  655 (807)
T KOG1094|consen  576 KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLES  655 (807)
T ss_pred             hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHh
Confidence            455667889999999999999999999999999999999999999999998776322  223344578889999888764


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      -                                 .++|||+.++|+|++.+          .++||+|||++|-
T Consensus       656 ~---------------------------------nfVHrd~a~rNcLv~~e----------~~iKiadfgmsR~  686 (807)
T KOG1094|consen  656 L---------------------------------NFVHRDLATRNCLVDGE----------FTIKIADFGMSRN  686 (807)
T ss_pred             h---------------------------------chhhccccccceeecCc----------ccEEecCcccccc
Confidence            2                                 47999999999999854          4899999999984

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.65  E-value=5.9e-16  Score=119.40  Aligned_cols=109  Identities=32%  Similarity=0.525  Sum_probs=85.9

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeec-CCcEEEEEEEeCCCceeEEEeee-------------------------
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKES-DQHVYLVMEFCNGGDLADYLVSK-------------------------   59 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~-~~~~~lv~e~~~~g~l~~~l~~~-------------------------   59 (160)
                      .....+.+|++++..+ +||||+++++++.. ++.+++++||+++|+|..++...                         
T Consensus        52 ~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (338)
T cd05102          52 SEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQS  131 (338)
T ss_pred             HHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhh
Confidence            3455678899999999 89999999997765 45689999999999987665421                         


Q ss_pred             -------------------------------------cCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC
Q psy11428         60 -------------------------------------GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ  102 (160)
Q Consensus        60 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~  102 (160)
                                                           ..++......+..+++.++.++|..                  
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~------------------  193 (338)
T cd05102         132 RVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASR------------------  193 (338)
T ss_pred             ccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHC------------------
Confidence                                                 1244556666778899999887742                  


Q ss_pred             eeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428        103 HVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus       103 ~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                     +++|||+||+||+++.+          ..++|+|||+++.+
T Consensus       194 ---------------~ivHrDiKp~Nil~~~~----------~~~kl~DfG~a~~~  224 (338)
T cd05102         194 ---------------KCIHRDLAARNILLSEN----------NVVKICDFGLARDI  224 (338)
T ss_pred             ---------------CEECCCCccceEEEcCC----------CcEEEeeccccccc
Confidence                           68999999999999744          37899999998753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.65  E-value=3e-16  Score=120.74  Aligned_cols=108  Identities=30%  Similarity=0.475  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+..|..+++.++||||+++++++......|+++||+++++|..++... +.+++.....++.+++.++.++|..  
T Consensus        44 ~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~--  121 (330)
T cd05601          44 TVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM--  121 (330)
T ss_pred             HHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            4556788899999999999999999999999999999999999998877654 5688888888999999999988753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       122 -------------------------------~i~H~Dlkp~NIll~~~----------~~~kL~Dfg~a~~~  152 (330)
T cd05601         122 -------------------------------GYVHRDIKPENVLIDRT----------GHIKLADFGSAARL  152 (330)
T ss_pred             -------------------------------CeEcccCchHheEECCC----------CCEEeccCCCCeEC
Confidence                                           68999999999999854          37899999998754

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.65  E-value=4.3e-16  Score=120.21  Aligned_cols=108  Identities=31%  Similarity=0.490  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....++.|..+++.++||||+++++++.+++.+|+++||+++++|..++.. ...+++.....+..+++.++.++|..  
T Consensus        44 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--  121 (331)
T cd05597          44 ETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL--  121 (331)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            345577889999999999999999999999999999999999999887754 34578888899999999999988753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       122 -------------------------------~ivH~dlkp~Nill~~~----------~~~kl~Dfg~~~~~  152 (331)
T cd05597         122 -------------------------------GYVHRDIKPDNVLLDKN----------GHIRLADFGSCLRL  152 (331)
T ss_pred             -------------------------------CeEECCCCHHHEEECCC----------CCEEEEECCceeec
Confidence                                           68999999999999744          37899999998643

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.65  E-value=3.7e-16  Score=120.53  Aligned_cols=107  Identities=27%  Similarity=0.481  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .+...+.|..++..+ +||||+++++++..++..|+++||++++++..++...+.+++.....+..+++.++.++|..  
T Consensus        38 ~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--  115 (329)
T cd05618          38 DIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER--  115 (329)
T ss_pred             HHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            345566778877766 89999999999999999999999999999987766667788999999999999999988753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++|||+||+||+++.+          ..++|+|||+++.
T Consensus       116 -------------------------------~ivH~Dikp~Nili~~~----------~~~kL~DfG~~~~  145 (329)
T cd05618         116 -------------------------------GIIYRDLKLDNVLLDSE----------GHIKLTDYGMCKE  145 (329)
T ss_pred             -------------------------------CeeeCCCCHHHEEECCC----------CCEEEeeCCcccc
Confidence                                           68999999999999854          3789999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.64  E-value=2.4e-16  Score=122.00  Aligned_cols=109  Identities=33%  Similarity=0.601  Sum_probs=95.6

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....++.|.++++.++||||+++++++.+++..|+++||++++++..++...+.+++.....++.+++.++.++|..  
T Consensus        43 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~--  120 (350)
T cd05573          43 NQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL--  120 (350)
T ss_pred             cHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            345567889999999999999999999999999999999999999988877667788899999999999999988752  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++||||||+||+++.+          +.++|+|||+++.+
T Consensus       121 -------------------------------giiH~Dlkp~NIll~~~----------~~~kL~Dfg~~~~~  151 (350)
T cd05573         121 -------------------------------GFIHRDIKPDNILIDAD----------GHIKLADFGLCKKM  151 (350)
T ss_pred             -------------------------------CeeccCCCHHHeEECCC----------CCEEeecCCCCccC
Confidence                                           68999999999999854          37899999998754

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0663|consensus

Probab=99.64  E-value=1.6e-16  Score=120.00  Aligned_cols=102  Identities=33%  Similarity=0.514  Sum_probs=83.1

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeec--CCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         13 RHILKELTELHHENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~--~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      -+|+.+|.+++|||||.+.++...  -+.+|+||||+.. |+...+... .++...++.-+..|++.+++++|.+     
T Consensus       123 LREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~-----  196 (419)
T KOG0663|consen  123 LREINILLKARHPNIVEVKEVVVGSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN-----  196 (419)
T ss_pred             HHHHHHHHhcCCCCeeeeEEEEeccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc-----
Confidence            358999999999999999886653  3679999999965 554433332 4788889999999999999988753     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  -++|||+||+|+|++..|          -+|++|||+||-.
T Consensus       197 ----------------------------wilHRDLK~SNLLm~~~G----------~lKiaDFGLAR~y  227 (419)
T KOG0663|consen  197 ----------------------------WILHRDLKTSNLLLSHKG----------ILKIADFGLAREY  227 (419)
T ss_pred             ----------------------------eeEecccchhheeeccCC----------cEEecccchhhhh
Confidence                                        479999999999998654          7899999999854

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.64  E-value=4.9e-16  Score=119.29  Aligned_cols=108  Identities=28%  Similarity=0.420  Sum_probs=91.3

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ..+..+..|.+++..+ +||||+++++++..++..|++|||++++++..++...+.+++.....+..+++.++.++|.. 
T Consensus        37 ~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-  115 (321)
T cd05591          37 DDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH-  115 (321)
T ss_pred             hHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3445566788888765 79999999999999999999999999999987776667788888888999999999988753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++|||+||+||+++.+          +.++|+|||+++.
T Consensus       116 --------------------------------~ivHrDikp~Nill~~~----------~~~kL~Dfg~~~~  145 (321)
T cd05591         116 --------------------------------GVIYRDLKLDNILLDAE----------GHCKLADFGMCKE  145 (321)
T ss_pred             --------------------------------CeeccCCCHHHeEECCC----------CCEEEeeccccee
Confidence                                            68999999999999754          3789999998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.64  E-value=5e-16  Score=121.68  Aligned_cols=106  Identities=31%  Similarity=0.489  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+..|+++++.++||||+++++++.++...|+++||+++|+|..++.. ..+++.....+..+++.++.++|..    
T Consensus        87 ~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~----  161 (370)
T cd05596          87 SAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSM----  161 (370)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            34467789999999999999999999999999999999999999876643 3577788888888999999988753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++||||||+||+++.+          +.++|+|||+++.+
T Consensus       162 -----------------------------~ivHrDLkp~NILl~~~----------~~~kL~DfG~~~~~  192 (370)
T cd05596         162 -----------------------------GFIHRDVKPDNMLLDKS----------GHLKLADFGTCMKM  192 (370)
T ss_pred             -----------------------------CeeccCCCHHHEEEcCC----------CCEEEEeccceeec
Confidence                                         68999999999999854          37999999998643

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.64  E-value=8.2e-16  Score=118.62  Aligned_cols=107  Identities=29%  Similarity=0.473  Sum_probs=91.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+++|..+++.++||+|+.+++++.+++..|++|||++||+|..++.. .+.+++.....++.+++.++.++|..   
T Consensus        45 ~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---  121 (331)
T cd05624          45 TACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---  121 (331)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            44567888889999999999999999999999999999999999888765 35678888888899999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       122 ------------------------------~iiHrDlkp~Nill~~~----------~~~kl~DfG~a~~~  152 (331)
T cd05624         122 ------------------------------HYVHRDIKPDNVLLDMN----------GHIRLADFGSCLKM  152 (331)
T ss_pred             ------------------------------CeeeccCchHHEEEcCC----------CCEEEEeccceeec
Confidence                                          68999999999999744          37899999998643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.64  E-value=4e-16  Score=119.87  Aligned_cols=108  Identities=31%  Similarity=0.478  Sum_probs=91.8

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ..+..+..|.+++..+ +||||+++++++...+..|++|||+++++|..++...+.+++.....+..+++.++.++|.. 
T Consensus        37 ~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~-  115 (320)
T cd05590          37 DDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDK-  115 (320)
T ss_pred             cHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3455666777887766 69999999999999999999999999999987776667788888999999999999988752 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++|||+||+||+++.+          +.++|+|||+++.
T Consensus       116 --------------------------------~ivH~dlkp~NIli~~~----------~~~kL~DfG~~~~  145 (320)
T cd05590         116 --------------------------------GIIYRDLKLDNVLLDHE----------GHCKLADFGMCKE  145 (320)
T ss_pred             --------------------------------CeEeCCCCHHHeEECCC----------CcEEEeeCCCCee
Confidence                                            68999999999999854          3789999998764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.64  E-value=6.5e-16  Score=121.11  Aligned_cols=106  Identities=31%  Similarity=0.472  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ......|..+++.++||||+++++++..+...|+++||+++|+|..++.. ..+++.....+..+++.++.++|..    
T Consensus        87 ~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~----  161 (371)
T cd05622          87 SAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSM----  161 (371)
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            34466788899999999999999999999999999999999999877643 3577888888889999999988753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++||||||+||+++.+          +.++|+|||+++.+
T Consensus       162 -----------------------------~ivHrDLkp~NIll~~~----------~~ikL~DfG~a~~~  192 (371)
T cd05622         162 -----------------------------GFIHRDVKPDNMLLDKS----------GHLKLADFGTCMKM  192 (371)
T ss_pred             -----------------------------CEEeCCCCHHHEEECCC----------CCEEEEeCCceeEc
Confidence                                         68999999999999854          37999999998654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.63  E-value=5.4e-16  Score=122.45  Aligned_cols=103  Identities=25%  Similarity=0.406  Sum_probs=88.2

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      ....|+++++.++||||+++++++..+...+++++++. +++..++...+.++......+..+++.++.++|..      
T Consensus       129 ~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~------  201 (391)
T PHA03212        129 GTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN------  201 (391)
T ss_pred             hhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC------
Confidence            45679999999999999999999999999999999985 57766665666788888889999999999988752      


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                 +++||||||+||+++.+          ..++|+|||+++.
T Consensus       202 ---------------------------~IvHrDiKP~NIll~~~----------~~vkL~DFG~a~~  231 (391)
T PHA03212        202 ---------------------------RIIHRDIKAENIFINHP----------GDVCLGDFGAACF  231 (391)
T ss_pred             ---------------------------CcccCCCChHhEEEcCC----------CCEEEEeCCcccc
Confidence                                       68999999999999754          3789999999864

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.63  E-value=8e-16  Score=118.49  Aligned_cols=108  Identities=27%  Similarity=0.459  Sum_probs=92.4

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ..+..++.|..++..+ +||+|+.+++++.....+|+++||++++++..++...+.+++.....+..+++.++.++|.. 
T Consensus        37 ~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~-  115 (327)
T cd05617          37 EDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER-  115 (327)
T ss_pred             hHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3445567788888887 69999999999999999999999999999987766667789999999999999999988753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++|||+||+||+++.+          ..++|+|||+++.
T Consensus       116 --------------------------------~ivHrDlkp~Nili~~~----------~~~kl~Dfg~~~~  145 (327)
T cd05617         116 --------------------------------GIIYRDLKLDNVLLDAD----------GHIKLTDYGMCKE  145 (327)
T ss_pred             --------------------------------CeeccCCCHHHEEEeCC----------CCEEEecccccee
Confidence                                            68999999999999854          3789999998863

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.63  E-value=1.1e-15  Score=115.09  Aligned_cols=107  Identities=29%  Similarity=0.430  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe----eecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ...+..|+++++.++||||+++.+++..+...|++|||+++|++..++.    ....+++.....+..+++.++.++|..
T Consensus        37 ~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~  116 (280)
T cd05608          37 YEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR  116 (280)
T ss_pred             HHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3456779999999999999999999999999999999999999865432    234578888888999999999988753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|||+||+||+++.+          +.++++|||+++.+
T Consensus       117 ---------------------------------~i~H~dlkp~Nili~~~----------~~~~l~dfg~~~~~  147 (280)
T cd05608         117 ---------------------------------RIIYRDLKPENVLLDND----------GNVRISDLGLAVEL  147 (280)
T ss_pred             ---------------------------------CcccCCCCHHHEEECCC----------CCEEEeeCccceec
Confidence                                             68999999999999743          37899999998643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.63  E-value=1.3e-15  Score=114.94  Aligned_cols=106  Identities=29%  Similarity=0.434  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+.+|+++++.++||+++.+++++.+++..++++||+++|++...+...  ..+++.....+..+++.++.++|..   
T Consensus        45 ~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---  121 (285)
T cd05631          45 AMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---  121 (285)
T ss_pred             HHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            34667999999999999999999999999999999999999997654332  3477888888889999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+|++++.+          ..++++|||+++..
T Consensus       122 ------------------------------~iiH~dikp~Nill~~~----------~~~kl~Dfg~~~~~  152 (285)
T cd05631         122 ------------------------------RIVYRDLKPENILLDDR----------GHIRISDLGLAVQI  152 (285)
T ss_pred             ------------------------------CEEeCCCCHHHEEECCC----------CCEEEeeCCCcEEc
Confidence                                          68999999999999743          37899999998654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.63  E-value=5.8e-16  Score=118.83  Aligned_cols=98  Identities=29%  Similarity=0.480  Sum_probs=84.8

Q ss_pred             HHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEee
Q psy11428         17 KELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLH   96 (160)
Q Consensus        17 ~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~   96 (160)
                      .+++.++||||+++++.+.+.+..|+++||++++++...+...+.+++.....+..+++.++.++|..            
T Consensus        48 ~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~------------  115 (321)
T cd05603          48 VLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL------------  115 (321)
T ss_pred             HHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC------------
Confidence            35788999999999999999999999999999999977666666788888888999999999988742            


Q ss_pred             eeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         97 CKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        97 ~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                           +++||||||+||+++.+          +.++|+|||+++.
T Consensus       116 ---------------------~ivH~Dlkp~NIll~~~----------~~~kl~Dfg~~~~  145 (321)
T cd05603         116 ---------------------NIIYRDLKPENILLDSQ----------GHVVLTDFGLCKE  145 (321)
T ss_pred             ---------------------CeEeccCCHHHeEECCC----------CCEEEccCCCCcc
Confidence                                 68999999999999754          3789999998864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.63  E-value=7.1e-16  Score=118.59  Aligned_cols=98  Identities=31%  Similarity=0.490  Sum_probs=84.9

Q ss_pred             HHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEee
Q psy11428         17 KELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLH   96 (160)
Q Consensus        17 ~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~   96 (160)
                      ..++.++||||+++++++...+..|+++||++++++..++...+.+.+.....+..+++.++.++|..            
T Consensus        48 ~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~------------  115 (325)
T cd05602          48 VLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL------------  115 (325)
T ss_pred             HHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC------------
Confidence            34678899999999999999999999999999999988776666778888888899999999988753            


Q ss_pred             eeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         97 CKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        97 ~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                           +++||||||+||+++.+          +.++|+|||+++.
T Consensus       116 ---------------------giiHrDlkp~Nili~~~----------~~~kl~DfG~a~~  145 (325)
T cd05602         116 ---------------------NIVYRDLKPENILLDSQ----------GHIVLTDFGLCKE  145 (325)
T ss_pred             ---------------------CeEecCCCHHHeEECCC----------CCEEEccCCCCcc
Confidence                                 68999999999999744          3789999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.63  E-value=1.2e-15  Score=113.87  Aligned_cols=108  Identities=28%  Similarity=0.407  Sum_probs=88.5

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-----CCCHHHHHHHHHHHHHHHHHh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-----TLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      .....+.+|++.++.++||||+++++.+...+..|+++||+++|++..++....     ...+.....+..+++.++.++
T Consensus        37 ~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l  116 (269)
T cd05042          37 DEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWL  116 (269)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHH
Confidence            344567789999999999999999999999999999999999999987765432     224556677888999999887


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      |..                                 +++|||+||+|++++.+          ..++++|||+++.
T Consensus       117 H~~---------------------------------~ivH~dlkp~Nill~~~----------~~~kl~dfg~~~~  149 (269)
T cd05042         117 HQA---------------------------------DFIHSDLALRNCQLTAD----------LSVKIGDYGLALE  149 (269)
T ss_pred             Hhc---------------------------------CEecccccHhheEecCC----------CcEEEeccccccc
Confidence            753                                 58999999999999854          3789999999853

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>KOG4717|consensus

Probab=99.63  E-value=8.5e-16  Score=122.01  Aligned_cols=108  Identities=31%  Similarity=0.568  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .--..+|++-++-++|||||+|+++...+..+|++.|+=.+|++.+|+.++ ..+.+...+.++.|++.++.++|..   
T Consensus        61 t~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---  137 (864)
T KOG4717|consen   61 TGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---  137 (864)
T ss_pred             hhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---
Confidence            334567899999999999999999999999999999999999999998765 3577888888999999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||.+....         +.+|+.|||++..+
T Consensus       138 ------------------------------HVVHRDLKPENVVFFEKl---------GlVKLTDFGFSNkf  169 (864)
T KOG4717|consen  138 ------------------------------HVVHRDLKPENVVFFEKL---------GLVKLTDFGFSNKF  169 (864)
T ss_pred             ------------------------------hhhcccCCcceeEEeeec---------CceEeeeccccccC
Confidence                                          589999999999998654         37899999998544

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.63  E-value=1.3e-15  Score=117.50  Aligned_cols=107  Identities=31%  Similarity=0.493  Sum_probs=91.3

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...++.|..++..++||+|+.+++++.++...|+++||+++|++..++.. .+.+++.....+..+++.++.++|..   
T Consensus        45 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---  121 (332)
T cd05623          45 TACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---  121 (332)
T ss_pred             HHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34467788889999999999999999999999999999999999888765 35678888888999999999887752   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.+          ..++|+|||+++.+
T Consensus       122 ------------------------------~iiHrDlkp~Nili~~~----------~~~kL~DfG~a~~~  152 (332)
T cd05623         122 ------------------------------HYVHRDIKPDNILMDMN----------GHIRLADFGSCLKL  152 (332)
T ss_pred             ------------------------------CeEecCCCHHHEEECCC----------CCEEEeecchheec
Confidence                                          68999999999999744          37899999998643

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.63  E-value=1.3e-15  Score=116.22  Aligned_cols=109  Identities=28%  Similarity=0.420  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++||||+++++++..++..|+++||+++++|..++...+.+++.....+..++++++.++|..   
T Consensus        42 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---  118 (308)
T cd06615          42 IRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREK---  118 (308)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh---
Confidence            34557789999999999999999999999999999999999999988877667788888889999999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   .+++|+|++|+|++++.+          +.++++|||+++.+
T Consensus       119 -----------------------------~~i~H~dl~p~nil~~~~----------~~~~l~dfg~~~~~  150 (308)
T cd06615         119 -----------------------------HKIMHRDVKPSNILVNSR----------GEIKLCDFGVSGQL  150 (308)
T ss_pred             -----------------------------CCEEECCCChHHEEEecC----------CcEEEccCCCcccc
Confidence                                         157999999999999854          36899999988643

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG4236|consensus

Probab=99.63  E-value=8.5e-16  Score=122.26  Aligned_cols=111  Identities=35%  Similarity=0.586  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe--eecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV--SKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      +-...++|++||.++.||.||.+-..|++.+.+|.|||.+.| |...++.  +++++++...+.++.|++.+++++|   
T Consensus       606 qesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G-DMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH---  681 (888)
T KOG4236|consen  606 QESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG-DMLEMILSSEKGRLPERITKFLVTQILVALRYLH---  681 (888)
T ss_pred             hHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc-hHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh---
Confidence            346789999999999999999999999999999999999854 5544443  5689999999999999999998865   


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                        +.                            .++|.|+||+|||+.++.       ..-.+|++|||+||.+.
T Consensus       682 --~k----------------------------nIvHCDLKPENVLLas~~-------~FPQvKlCDFGfARiIg  718 (888)
T KOG4236|consen  682 --FK----------------------------NIVHCDLKPENVLLASAS-------PFPQVKLCDFGFARIIG  718 (888)
T ss_pred             --hc----------------------------ceeeccCCchheeeccCC-------CCCceeeccccceeecc
Confidence              33                            478999999999998653       34578999999999764

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.63  E-value=9e-16  Score=118.02  Aligned_cols=97  Identities=32%  Similarity=0.514  Sum_probs=85.1

Q ss_pred             HHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeee
Q psy11428         18 ELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHC   97 (160)
Q Consensus        18 ~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~   97 (160)
                      +++.++||||+++++.+...+..|+++||++++++..++...+.+++.....+..+++.++.++|..             
T Consensus        49 ~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~-------------  115 (325)
T cd05604          49 LLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSI-------------  115 (325)
T ss_pred             HHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-------------
Confidence            4677899999999999999999999999999999987776667788889999999999999988752             


Q ss_pred             eecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         98 KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        98 ~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                          +++|||+||+||+++.+          +.++|+|||+++.
T Consensus       116 --------------------givH~Dlkp~NIll~~~----------~~~kL~DfG~~~~  145 (325)
T cd05604         116 --------------------NIVYRDLKPENILLDSQ----------GHVVLTDFGLCKE  145 (325)
T ss_pred             --------------------CeeecCCCHHHeEECCC----------CCEEEeecCCccc
Confidence                                68999999999999754          3789999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.63  E-value=1.1e-15  Score=119.95  Aligned_cols=107  Identities=34%  Similarity=0.497  Sum_probs=87.5

Q ss_pred             HHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----------------------------
Q psy11428          9 IVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----------------------------   59 (160)
Q Consensus         9 ~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----------------------------   59 (160)
                      ...+.+|+++++.+ +||||+++++++.+.+.+|+++||+++|++.+++..+                            
T Consensus        85 ~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (374)
T cd05106          85 REALMSELKILSHLGQHKNIVNLLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEK  164 (374)
T ss_pred             HHHHHHHHHHHHhhccCCceeeEeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhc
Confidence            45677899999999 8999999999999999999999999999987654321                            


Q ss_pred             ------------------------------------------cCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeee
Q psy11428         60 ------------------------------------------GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHC   97 (160)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~   97 (160)
                                                                ..++......+..+++.++.++|..             
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-------------  231 (374)
T cd05106         165 KYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK-------------  231 (374)
T ss_pred             ccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC-------------
Confidence                                                      1245566777888999999887742             


Q ss_pred             eecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         98 KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        98 ~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                          +++|||+||+|++++.+          ..++|+|||+++.+
T Consensus       232 --------------------giiHrDLkp~Nil~~~~----------~~~kL~DfGla~~~  262 (374)
T cd05106         232 --------------------NCIHRDVAARNVLLTDG----------RVAKICDFGLARDI  262 (374)
T ss_pred             --------------------CEEeccCchheEEEeCC----------CeEEEeeceeeeec
Confidence                                68999999999999743          37899999998643

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.62  E-value=8.6e-16  Score=117.82  Aligned_cols=107  Identities=32%  Similarity=0.481  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHhh-cCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTE-LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~-l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ......|.+++.. .+||||+++++++..++..|+++||+++|+|..++...+.+++.....+..+++.++.++|..   
T Consensus        39 ~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---  115 (316)
T cd05592          39 VECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK---  115 (316)
T ss_pred             HHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            3344455556654 489999999999999999999999999999987776667788888888999999999988752   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.+          ..++|+|||+++..
T Consensus       116 ------------------------------~ivH~dlkp~Nill~~~----------~~~kL~Dfg~a~~~  146 (316)
T cd05592         116 ------------------------------GIIYRDLKLDNVLLDKD----------GHIKIADFGMCKEN  146 (316)
T ss_pred             ------------------------------CEEeCCCCHHHeEECCC----------CCEEEccCcCCeEC
Confidence                                          68999999999999754          37899999998643

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.62  E-value=2.1e-15  Score=111.53  Aligned_cols=109  Identities=28%  Similarity=0.469  Sum_probs=92.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+.+|+++++.++||||+++++++..+...|+++||++++++..++...+ .+++.....+..+++.++.++|..
T Consensus        34 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~  113 (252)
T cd05084          34 PDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK  113 (252)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3455678899999999999999999999999999999999999999988775433 477888888999999999887642


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                       +++|+|++|.||+++.+          ..++++|||+++.
T Consensus       114 ---------------------------------~i~H~dl~p~nil~~~~----------~~~kl~dfg~~~~  143 (252)
T cd05084         114 ---------------------------------HCIHRDLAARNCLVTEK----------NVLKISDFGMSRE  143 (252)
T ss_pred             ---------------------------------CccccccchheEEEcCC----------CcEEECccccCcc
Confidence                                             68999999999999743          3689999998764

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.62  E-value=1.1e-15  Score=120.01  Aligned_cols=108  Identities=33%  Similarity=0.489  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--------------------------
Q psy11428          8 SIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--------------------------   60 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--------------------------   60 (160)
                      ....+.+|+++++.+ +||||+++++++.+++..+++|||+++|+|..++....                          
T Consensus        81 ~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (375)
T cd05104          81 EREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREM  160 (375)
T ss_pred             HHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcc
Confidence            345667899999999 89999999999999999999999999999876653211                          


Q ss_pred             -------------------------------------------------CCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         61 -------------------------------------------------TLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        61 -------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                                                                       .+++.....+..+++.++.++|..       
T Consensus       161 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~-------  233 (375)
T cd05104         161 SCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK-------  233 (375)
T ss_pred             cchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-------
Confidence                                                             234555666777888888887642       


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                +++|||+||+||+++.+          ..++++|||+++.+
T Consensus       234 --------------------------~ivH~Dlkp~Nill~~~----------~~~kl~DfG~a~~~  264 (375)
T cd05104         234 --------------------------NCIHRDLAARNILLTHG----------RITKICDFGLARDI  264 (375)
T ss_pred             --------------------------CeeccCCchhhEEEECC----------CcEEEecCccceec
Confidence                                      58999999999999743          36899999998643

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0658|consensus

Probab=99.62  E-value=7.8e-17  Score=122.49  Aligned_cols=103  Identities=31%  Similarity=0.463  Sum_probs=82.2

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeecC--C---cEEEEEEEeCCCceeEEEe----eecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428         13 RHILKELTELHHENVVELLHCKESD--Q---HVYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~~--~---~~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ..|+.+|+.+.|||||+|..+|...  .   -..+|+||+|. +|.+.++    .+..++...++.+.-|+..++.++|.
T Consensus        65 nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~  143 (364)
T KOG0658|consen   65 NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS  143 (364)
T ss_pred             cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence            4689999999999999997766533  2   34788999976 5555444    24567888888999999999998875


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|||+||.|+|++..         ++.+||+|||.|+.+
T Consensus       144 ~---------------------------------~IcHRDIKPqNlLvD~~---------tg~LKicDFGSAK~L  176 (364)
T KOG0658|consen  144 H---------------------------------GICHRDIKPQNLLVDPD---------TGVLKICDFGSAKVL  176 (364)
T ss_pred             c---------------------------------CcccCCCChheEEEcCC---------CCeEEeccCCcceee
Confidence            2                                 68999999999999854         458999999999755

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.62  E-value=1.2e-15  Score=117.28  Aligned_cols=97  Identities=30%  Similarity=0.503  Sum_probs=84.8

Q ss_pred             HHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeee
Q psy11428         18 ELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHC   97 (160)
Q Consensus        18 ~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~   97 (160)
                      +++.++||||+++++.+......|+++||++++++..++...+.+++.....+..+++.++.++|..             
T Consensus        49 ~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-------------  115 (323)
T cd05575          49 LLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSL-------------  115 (323)
T ss_pred             HHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-------------
Confidence            4578999999999999999999999999999999987776667788888888999999999988753             


Q ss_pred             eecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         98 KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        98 ~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                          +++|||+||+||+++.+          +.++|+|||+++.
T Consensus       116 --------------------givH~dikp~NIll~~~----------~~~kl~Dfg~~~~  145 (323)
T cd05575         116 --------------------NIIYRDLKPENILLDSQ----------GHVVLTDFGLCKE  145 (323)
T ss_pred             --------------------CeEeCCCCHHHeEECCC----------CcEEEeccCCCcc
Confidence                                68999999999999754          3789999998864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.62  E-value=8.6e-16  Score=115.67  Aligned_cols=108  Identities=35%  Similarity=0.516  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+.+++.++||||+++++++...+..|+++||++++.+.........+++..+..+..+++.++.++|..   
T Consensus        43 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---  119 (287)
T cd07848          43 VKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN---  119 (287)
T ss_pred             chhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34567789999999999999999999999999999999999887654433345678888888999999999988742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|+||+|++++.+          ..++|+|||+++.+
T Consensus       120 ------------------------------~i~H~dlkp~Nill~~~----------~~~kl~Dfg~~~~~  150 (287)
T cd07848         120 ------------------------------DIVHRDIKPENLLISHN----------DVLKLCDFGFARNL  150 (287)
T ss_pred             ------------------------------CeecCCCCHHHEEEcCC----------CcEEEeeccCcccc
Confidence                                          68999999999999744          37899999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG4250|consensus

Probab=99.61  E-value=1.6e-15  Score=123.39  Aligned_cols=115  Identities=37%  Similarity=0.492  Sum_probs=93.4

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCC------cEEEEEEEeCCCceeEEEee---ecCCCHHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQ------HVYLVMEFCNGGDLADYLVS---KGTLSEDTIRIFLKQIVQA   77 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~------~~~lv~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~~~~~~   77 (160)
                      .-..+-..|+++|++++|||||.++++.++..      .-.++||||+||+|...+.+   ...+++.++..+...+..+
T Consensus        53 r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~a  132 (732)
T KOG4250|consen   53 RPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSA  132 (732)
T ss_pred             chHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHH
Confidence            34556678999999999999999999876554      45889999999999887753   3458899999999999999


Q ss_pred             HHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         78 LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        78 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      ++++|.+                                 +|+||||||.||++-...      |+..--||+|||.||-
T Consensus       133 l~~LrEn---------------------------------~IvHRDlKP~NIvl~~Ge------dgq~IyKLtDfG~Are  173 (732)
T KOG4250|consen  133 LRHLREN---------------------------------GIVHRDLKPGNIVLQIGE------DGQSIYKLTDFGAARE  173 (732)
T ss_pred             HHHHHHc---------------------------------CceeccCCCCcEEEeecC------CCceEEeeeccccccc
Confidence            9998753                                 689999999999986421      2334459999999998


Q ss_pred             cCC
Q psy11428        158 LQD  160 (160)
Q Consensus       158 ~~~  160 (160)
                      +++
T Consensus       174 l~d  176 (732)
T KOG4250|consen  174 LDD  176 (732)
T ss_pred             CCC
Confidence            764

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.61  E-value=4.3e-15  Score=115.49  Aligned_cols=104  Identities=29%  Similarity=0.492  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++|+||+++++.+...+..++++||+.++++...    ....+.....+..+++.++.++|..   
T Consensus       115 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~---  187 (353)
T PLN00034        115 VRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRR---  187 (353)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            345678899999999999999999999999999999999999988643    2345667777888999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++||||||+||+++.+          ..++|+|||+++.+
T Consensus       188 ------------------------------~ivHrDlkp~NIll~~~----------~~~kL~DfG~~~~~  218 (353)
T PLN00034        188 ------------------------------HIVHRDIKPSNLLINSA----------KNVKIADFGVSRIL  218 (353)
T ss_pred             ------------------------------CEeecCCCHHHEEEcCC----------CCEEEcccccceec
Confidence                                          68999999999999743          37899999998754

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.61  E-value=2.5e-15  Score=111.55  Aligned_cols=107  Identities=30%  Similarity=0.530  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .+..+.+|+++++.++||||+++++++..+...++++|+++++++...+...+.+++.....+..+++.++.++|..   
T Consensus        47 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---  123 (263)
T cd06625          47 EVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN---  123 (263)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            34567889999999999999999999999999999999999999988776666778888888889999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       124 ------------------------------~i~H~dl~p~nilv~~~----------~~~~l~dfg~~~~  153 (263)
T cd06625         124 ------------------------------MIVHRDIKGANILRDSA----------GNVKLGDFGASKR  153 (263)
T ss_pred             ------------------------------CeecCCCCHHHEEEcCC----------CCEEEeeccccee
Confidence                                          68999999999999744          3789999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.61  E-value=1.3e-15  Score=115.18  Aligned_cols=105  Identities=35%  Similarity=0.587  Sum_probs=87.2

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|+++++.++||||+++++++......++++|++++ ++..++...+ .++......+..+++.++.++|..   
T Consensus        47 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---  122 (288)
T cd07871          47 PCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---  122 (288)
T ss_pred             chhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            34566899999999999999999999999999999999975 7766554433 467788888899999999987742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|||+||+||+++.+          +.++|+|||+++.
T Consensus       123 ------------------------------~ivH~dlkp~Nil~~~~----------~~~kl~DfG~~~~  152 (288)
T cd07871         123 ------------------------------KILHRDLKPQNLLINEK----------GELKLADFGLARA  152 (288)
T ss_pred             ------------------------------CcccCCCCHHHEEECCC----------CCEEECcCcceee
Confidence                                          68999999999999754          3789999999864

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.61  E-value=1.5e-15  Score=116.75  Aligned_cols=102  Identities=32%  Similarity=0.521  Sum_probs=85.0

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         12 TRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                      +..++..++.++||||+++++++...+..|+++||++++++...+. .+.+++.....+..+++.++.++|..       
T Consensus        49 e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~al~~lH~~-------  120 (324)
T cd05589          49 EKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIH-TDVFSEPRAVFYAACVVLGLQYLHEN-------  120 (324)
T ss_pred             HHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCcHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhC-------
Confidence            3344445567889999999999999999999999999999876654 35688888889999999999987742       


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                +++|||+||+|++++.+          +.++|+|||+++.
T Consensus       121 --------------------------~ivHrdlkp~Nill~~~----------~~~kL~Dfg~~~~  150 (324)
T cd05589         121 --------------------------KIVYRDLKLDNLLLDTE----------GFVKIADFGLCKE  150 (324)
T ss_pred             --------------------------CeEecCCCHHHeEECCC----------CcEEeCcccCCcc
Confidence                                      68999999999999854          3789999998753

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG1989|consensus

Probab=99.61  E-value=7.2e-16  Score=127.51  Aligned_cols=111  Identities=30%  Similarity=0.541  Sum_probs=92.1

Q ss_pred             chhHHHHHHHHHHHHhhcC-CcceEEEeeeee-------cCCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELH-HENVVELLHCKE-------SDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQI   74 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~-h~~iv~l~~~~~-------~~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~   74 (160)
                      .+.++.+.++|+++++.|. |+|||.++++..       ..-+++++||||.||.|.+++..  +..+++.++..++.++
T Consensus        74 de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv  153 (738)
T KOG1989|consen   74 DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDV  153 (738)
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHH
Confidence            5678899999999999997 999999999321       12468999999999999888763  3458999999999999


Q ss_pred             HHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeec
Q psy11428         75 VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGF  154 (160)
Q Consensus        75 ~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~  154 (160)
                      ++++..+|-..                               +.+||||||.+|||++.+          +..||+|||.
T Consensus       154 ~~AVa~mH~~~-------------------------------pPiIHRDLKiENvLls~~----------g~~KLCDFGS  192 (738)
T KOG1989|consen  154 CEAVAAMHYLK-------------------------------PPIIHRDLKIENVLLSAD----------GNYKLCDFGS  192 (738)
T ss_pred             HHHHHHHhcCC-------------------------------CccchhhhhhhheEEcCC----------CCEEeCcccc
Confidence            99999877321                               368999999999999854          3789999998


Q ss_pred             cc
Q psy11428        155 AR  156 (160)
Q Consensus       155 a~  156 (160)
                      |.
T Consensus       193 at  194 (738)
T KOG1989|consen  193 AT  194 (738)
T ss_pred             cc
Confidence            74

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.61  E-value=1.7e-15  Score=116.56  Aligned_cols=107  Identities=36%  Similarity=0.565  Sum_probs=87.9

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecC-----CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESD-----QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~-----~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      +....+.+|+++++.++||||+++++++...     ..+|+++||++ +++..++.....+++.....++.+++.++.++
T Consensus        41 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~L  119 (338)
T cd07859          41 SDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYI  119 (338)
T ss_pred             hhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHH
Confidence            3445677899999999999999999877533     24899999995 57776666666788888999999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      |..                                 +++|||+||+||+++.+          +.++|+|||+++.
T Consensus       120 H~~---------------------------------~ivH~dlkp~NIll~~~----------~~~kL~Dfg~~~~  152 (338)
T cd07859         120 HTA---------------------------------NVFHRDLKPKNILANAD----------CKLKICDFGLARV  152 (338)
T ss_pred             HHC---------------------------------CeecCCCCHHHeEECCC----------CcEEEccCccccc
Confidence            753                                 68999999999999754          3789999999864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.61  E-value=4.3e-15  Score=111.75  Aligned_cols=105  Identities=29%  Similarity=0.389  Sum_probs=86.9

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      .+..|.++++.++||||+++.+.+..+...|+++||++++++...+...  ..++......+..+++.++.++|..    
T Consensus        39 ~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~----  114 (277)
T cd05607          39 MALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM----  114 (277)
T ss_pred             HHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            4456889999999999999999999999999999999999987654332  2366777777888999999887742    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|||+||+|++++.+          ..++++|||++..+
T Consensus       115 -----------------------------~ivH~dikp~Nili~~~----------~~~~l~Dfg~~~~~  145 (277)
T cd05607         115 -----------------------------DIVYRDMKPENVLLDDQ----------GNCRLSDLGLAVEL  145 (277)
T ss_pred             -----------------------------CEEEccCChHhEEEcCC----------CCEEEeeceeeeec
Confidence                                         68999999999999754          37899999998644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.61  E-value=1.5e-15  Score=116.50  Aligned_cols=107  Identities=31%  Similarity=0.503  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .+.....|.++++.+ +||||+++++++...+..|+++||+++++|..++...+.+++.....+..+++.++.++|..  
T Consensus        38 ~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~--  115 (318)
T cd05570          38 DVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER--  115 (318)
T ss_pred             HHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            455566778888777 69999999999999999999999999999987776666788999999999999999988753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++|||+||+|++++.+          ..++|+|||+++.
T Consensus       116 -------------------------------~ivH~dlkp~Nill~~~----------~~~kl~Dfg~~~~  145 (318)
T cd05570         116 -------------------------------GIIYRDLKLDNVLLDSE----------GHIKIADFGMCKE  145 (318)
T ss_pred             -------------------------------CeEccCCCHHHeEECCC----------CcEEecccCCCee
Confidence                                           68999999999999854          3789999998853

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.60  E-value=1.7e-15  Score=115.15  Aligned_cols=104  Identities=36%  Similarity=0.584  Sum_probs=86.3

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+++++.++||||+++++++.++...|+++||+++ ++..++.. .+.+++..+..++.+++.++.++|..    
T Consensus        48 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~----  122 (303)
T cd07869          48 FTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR----  122 (303)
T ss_pred             hhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            3567799999999999999999999999999999999964 55444433 34577888888999999999988753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   +++|||+||+||+++.+          +.++|+|||+++.
T Consensus       123 -----------------------------~ivH~dlkp~Nill~~~----------~~~kl~Dfg~~~~  152 (303)
T cd07869         123 -----------------------------YILHRDLKPQNLLISDT----------GELKLADFGLARA  152 (303)
T ss_pred             -----------------------------CeecCCCCHHHEEECCC----------CCEEECCCCccee
Confidence                                         68999999999999754          3789999999864

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.60  E-value=1.4e-15  Score=116.58  Aligned_cols=106  Identities=30%  Similarity=0.440  Sum_probs=89.3

Q ss_pred             HHHHHHHHHHHhh-cCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTE-LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~-l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ......|.+++.. ++||+|+++++++...+.+|++|||++++++..++...+.+++.....+..+++.++.++|..   
T Consensus        39 ~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~---  115 (316)
T cd05620          39 VECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---  115 (316)
T ss_pred             HHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            4455667777765 489999999999999999999999999999988776667788888888999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|||+||+||+++.+          +.++|+|||+++.
T Consensus       116 ------------------------------~ivHrDlkp~Nil~~~~----------~~~kl~Dfg~~~~  145 (316)
T cd05620         116 ------------------------------GIIYRDLKLDNVMLDRD----------GHIKIADFGMCKE  145 (316)
T ss_pred             ------------------------------CeEecCCCHHHeEECCC----------CCEEeCccCCCee
Confidence                                          68999999999999754          3789999998763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.60  E-value=2.8e-15  Score=113.32  Aligned_cols=109  Identities=35%  Similarity=0.543  Sum_probs=95.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|+++++.++||||+++++++......|+++|+++++++..++...+.+++.....+..++++++.++|..  
T Consensus        43 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~--  120 (290)
T cd05580          43 KQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL--  120 (290)
T ss_pred             hHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            345667889999999999999999999999999999999999999988876667788889999999999999987752  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+||+++.+          +.++++|||+++..
T Consensus       121 -------------------------------~i~H~dl~p~nili~~~----------~~~kl~dfg~~~~~  151 (290)
T cd05580         121 -------------------------------DIVYRDLKPENLLLDSD----------GYIKITDFGFAKRV  151 (290)
T ss_pred             -------------------------------CEecCCCCHHHEEECCC----------CCEEEeeCCCcccc
Confidence                                           68999999999999754          37899999998754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.60  E-value=3.4e-15  Score=111.39  Aligned_cols=109  Identities=25%  Similarity=0.390  Sum_probs=92.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+..|+.+++.++||||+++++++..++..|+++|+++++++..++... +.++......+..+++.++.++|.. 
T Consensus        47 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~-  125 (267)
T cd05066          47 KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM-  125 (267)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            34567788999999999999999999999999999999999999998876543 3467788888888999999887642 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|+||+|++++.+          ..++++|||+++.+
T Consensus       126 --------------------------------~i~h~dlkp~nili~~~----------~~~~l~dfg~~~~~  156 (267)
T cd05066         126 --------------------------------GYVHRDLAARNILVNSN----------LVCKVSDFGLSRVL  156 (267)
T ss_pred             --------------------------------CEeehhhchhcEEECCC----------CeEEeCCCCccccc
Confidence                                            57999999999999743          37899999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.60  E-value=2.7e-15  Score=114.29  Aligned_cols=107  Identities=33%  Similarity=0.526  Sum_probs=90.0

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----------------CCCHHHHHH
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------------TLSEDTIRI   69 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~~~   69 (160)
                      .....+.+|++++.++ +||||+++++++.+.+..|+++||++++++..++...+                .+++.....
T Consensus        49 ~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  128 (303)
T cd05088          49 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH  128 (303)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHH
Confidence            4456778899999999 89999999999999999999999999999877664322                356778888


Q ss_pred             HHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEE
Q psy11428         70 FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKI  149 (160)
Q Consensus        70 ~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l  149 (160)
                      +..+++.++.++|..                                 +++|||+||+|++++.+          ..++|
T Consensus       129 ~~~qi~~al~~LH~~---------------------------------gi~H~dlkp~Nili~~~----------~~~kl  165 (303)
T cd05088         129 FAADVARGMDYLSQK---------------------------------QFIHRDLAARNILVGEN----------YVAKI  165 (303)
T ss_pred             HHHHHHHHHHHHHhC---------------------------------CccccccchheEEecCC----------CcEEe
Confidence            899999999887742                                 68999999999999754          37899


Q ss_pred             eeeeccc
Q psy11428        150 ADFGFAR  156 (160)
Q Consensus       150 ~dfg~a~  156 (160)
                      +|||+++
T Consensus       166 ~dfg~~~  172 (303)
T cd05088         166 ADFGLSR  172 (303)
T ss_pred             CccccCc
Confidence            9999885

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=3.1e-15  Score=112.94  Aligned_cols=106  Identities=29%  Similarity=0.430  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+.+|+++++.++||||+++++++.+++..|+++||+.++++...+...  ..+++.....+..+++.++.++|..   
T Consensus        45 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---  121 (285)
T cd05605          45 AMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---  121 (285)
T ss_pred             HHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34567999999999999999999999999999999999999997654332  3578888888999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++..
T Consensus       122 ------------------------------~ivH~dlkp~Nil~~~~----------~~~~l~Dfg~~~~~  152 (285)
T cd05605         122 ------------------------------RIVYRDLKPENILLDDY----------GHIRISDLGLAVEI  152 (285)
T ss_pred             ------------------------------CcEecCCCHHHEEECCC----------CCEEEeeCCCceec
Confidence                                          58999999999999744          37899999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.60  E-value=2.7e-15  Score=125.68  Aligned_cols=109  Identities=29%  Similarity=0.482  Sum_probs=94.2

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+..+..|+.+++.++||||++++.++.....+|+||||+.+++|..++...+.+++.....++.+++.++.++|..  
T Consensus        46 ~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~--  123 (669)
T cd05610          46 NMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH--  123 (669)
T ss_pred             HHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            345677889999999999999999999999999999999999999988776666778888888999999999988752  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++||||||+||+++.+          +.++|+|||+++..
T Consensus       124 -------------------------------gIiHrDLKP~NILl~~~----------g~vkL~DFGls~~~  154 (669)
T cd05610         124 -------------------------------GIIHRDLKPDNMLISNE----------GHIKLTDFGLSKVT  154 (669)
T ss_pred             -------------------------------CEEeCCccHHHEEEcCC----------CCEEEEeCCCCccc
Confidence                                           68999999999999743          37899999999754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.60  E-value=2.8e-15  Score=115.20  Aligned_cols=108  Identities=29%  Similarity=0.419  Sum_probs=90.7

Q ss_pred             hHHHHHHHHHHHHhhcCCc-ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHE-NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~-~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ..+.....|.+++..++|+ +|+.+++++.+.+.+|++|||++++++..++...+.+++.....+..+++.++.++|.. 
T Consensus        42 ~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-  120 (324)
T cd05587          42 DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK-  120 (324)
T ss_pred             hHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3455667788888888765 58889999999999999999999999987776667788888888999999999988752 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++|||+||+||+++.+          +.++|+|||+++.
T Consensus       121 --------------------------------~ivH~dlkp~Nill~~~----------~~~kL~Dfg~~~~  150 (324)
T cd05587         121 --------------------------------GIIYRDLKLDNVMLDAE----------GHIKIADFGMCKE  150 (324)
T ss_pred             --------------------------------CeEecCCCHHHeEEcCC----------CCEEEeecCccee
Confidence                                            68999999999999754          3789999998763

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.60  E-value=3.6e-15  Score=111.39  Aligned_cols=108  Identities=19%  Similarity=0.269  Sum_probs=91.6

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+..|+..++.++||||+++++.+..++..+++|||++++++..++... +.+++.....+..+++.++.++|.. 
T Consensus        48 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~-  126 (266)
T cd05064          48 KQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM-  126 (266)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            33456778999999999999999999999999999999999999998877553 4678888889999999999987742 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++|+|+||+|++++.+          ..++++|||.+..
T Consensus       127 --------------------------------~iiH~dikp~nili~~~----------~~~~l~dfg~~~~  156 (266)
T cd05064         127 --------------------------------GYVHKGLAAHKVLVNSD----------LVCKISGFRRLQE  156 (266)
T ss_pred             --------------------------------CEeeccccHhhEEEcCC----------CcEEECCCccccc
Confidence                                            68999999999999744          3789999997643

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.60  E-value=2.5e-15  Score=115.75  Aligned_cols=105  Identities=31%  Similarity=0.489  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHhhc---CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428         10 VLTRHILKELTEL---HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus        10 ~~~~~~~~~l~~l---~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....|..++..+   +||+|+.+++.+......|+++||++++++..++...+.+++.....++.+++.++.++|..  
T Consensus        38 ~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~--  115 (330)
T cd05586          38 AHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY--  115 (330)
T ss_pred             HHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            3344455555554   69999999999999999999999999999987776677789999999999999999988753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++||||||+||+++.+          +.++|+|||+++.
T Consensus       116 -------------------------------~ivHrDlkp~Nili~~~----------~~~kl~Dfg~a~~  145 (330)
T cd05586         116 -------------------------------DIVYRDLKPENILLDAT----------GHIALCDFGLSKA  145 (330)
T ss_pred             -------------------------------CeEeccCCHHHeEECCC----------CCEEEecCCcCcC
Confidence                                           68999999999999854          3789999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0196|consensus

Probab=99.60  E-value=6e-16  Score=127.24  Aligned_cols=115  Identities=23%  Similarity=0.396  Sum_probs=97.5

Q ss_pred             ccchhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHh
Q psy11428          3 TQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         3 ~~~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      ..|+++-..|-.|..|+.+..||||++|-++.....++.++.|||.+|.|-.+++.+ +.+....+..+...+..+++++
T Consensus       668 GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYL  747 (996)
T KOG0196|consen  668 GYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYL  747 (996)
T ss_pred             CccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHH
Confidence            346677778888999999999999999999999999999999999999999888754 5566667777778888887775


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccCC
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD  160 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~~  160 (160)
                      ..                                 +.++||||.++|||+++|          ..+|++|||++|++.|
T Consensus       748 sd---------------------------------m~YVHRDLAARNILVNsn----------LvCKVsDFGLSRvled  783 (996)
T KOG0196|consen  748 SD---------------------------------MNYVHRDLAARNILVNSN----------LVCKVSDFGLSRVLED  783 (996)
T ss_pred             hh---------------------------------cCchhhhhhhhheeeccc----------eEEEeccccceeeccc
Confidence            42                                 267999999999999854          5899999999998864

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.60  E-value=5.2e-15  Score=111.30  Aligned_cols=109  Identities=28%  Similarity=0.479  Sum_probs=89.1

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-----------------cCCCHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-----------------GTLSEDTIRI   69 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-----------------~~~~~~~~~~   69 (160)
                      .....+++|+++++.++||||+++++.+..+...|+++||++++++..++...                 ..+++.....
T Consensus        49 ~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  128 (283)
T cd05090          49 QQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLH  128 (283)
T ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHH
Confidence            34466788999999999999999999999999999999999999987765321                 2345666777


Q ss_pred             HHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEE
Q psy11428         70 FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKI  149 (160)
Q Consensus        70 ~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l  149 (160)
                      +..+++.++.++|..                                 +++|+|+||+|++++.+          ..+++
T Consensus       129 i~~~i~~al~~lH~~---------------------------------~i~H~dlkp~nili~~~----------~~~kl  165 (283)
T cd05090         129 IAIQIAAGMEYLSSH---------------------------------FFVHKDLAARNILIGEQ----------LHVKI  165 (283)
T ss_pred             HHHHHHHHHHHHHhc---------------------------------CeehhccccceEEEcCC----------CcEEe
Confidence            888899999887742                                 58999999999999854          36899


Q ss_pred             eeeeccccc
Q psy11428        150 ADFGFARFL  158 (160)
Q Consensus       150 ~dfg~a~~~  158 (160)
                      +|||+++.+
T Consensus       166 ~dfg~~~~~  174 (283)
T cd05090         166 SDLGLSREI  174 (283)
T ss_pred             ccccccccc
Confidence            999998643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.60  E-value=3.1e-15  Score=111.35  Aligned_cols=108  Identities=32%  Similarity=0.562  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .+..++.|+.+++.++||||+++++.+......++++|+++++++..++...+.+++.....+..+++.++.++|..   
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~---  125 (267)
T cd06628          49 MLDALAREIALLKELQHENIVQYLGSSLDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR---  125 (267)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc---
Confidence            34567889999999999999999999999999999999999999988877667788888888999999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+||+++.+          ..++++|||+++.+
T Consensus       126 ------------------------------~ivH~di~p~nil~~~~----------~~~~l~dfg~~~~~  156 (267)
T cd06628         126 ------------------------------GIIHRDIKGANILVDNK----------GGIKISDFGISKKL  156 (267)
T ss_pred             ------------------------------CcccccCCHHHEEEcCC----------CCEEecccCCCccc
Confidence                                          58999999999999754          37899999988654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>KOG1095|consensus

Probab=99.59  E-value=1.6e-15  Score=128.97  Aligned_cols=110  Identities=28%  Similarity=0.435  Sum_probs=96.1

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-------cCCCHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-------GTLSEDTIRIFLKQIVQA   77 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-------~~~~~~~~~~~~~~~~~~   77 (160)
                      +...+..|..|-.++++++||||++++|++.+....++++|||.+|||..++++.       ..++..++..+..+++++
T Consensus       735 ~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G  814 (1025)
T KOG1095|consen  735 SEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKG  814 (1025)
T ss_pred             CHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhh
Confidence            4567788999999999999999999999999999999999999999999998765       235678888899999999


Q ss_pred             HHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         78 LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        78 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +.+++..                                 +++||||.++|+|++..+          .+||+|||+||.
T Consensus       815 ~~YLe~~---------------------------------~fvHRDLAaRNCLL~~~r----------~VKIaDFGlArD  851 (1025)
T KOG1095|consen  815 MNYLESK---------------------------------HFVHRDLAARNCLLDERR----------VVKIADFGLARD  851 (1025)
T ss_pred             hHHHHhC---------------------------------CCcCcchhhhheeecccC----------cEEEcccchhHh
Confidence            8887642                                 579999999999998543          799999999984

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.59  E-value=4.3e-15  Score=110.68  Aligned_cols=107  Identities=30%  Similarity=0.515  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .....++|+.+++.++|||++++++++...+..|+++||++++++..++...+.+++.....+..+++.++.++|..   
T Consensus        49 ~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---  125 (267)
T cd06645          49 DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK---  125 (267)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34456789999999999999999999999999999999999999988776677789999999999999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       126 ------------------------------~i~H~dlkp~nili~~~----------~~~~l~dfg~~~~  155 (267)
T cd06645         126 ------------------------------GKMHRDIKGANILLTDN----------GHVKLADFGVSAQ  155 (267)
T ss_pred             ------------------------------CeecCCCCHHHEEECCC----------CCEEECcceeeeE
Confidence                                          57999999999999744          3689999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.59  E-value=2.7e-15  Score=115.10  Aligned_cols=106  Identities=30%  Similarity=0.410  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHhh-cCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTE-LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~-l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ......|.++++. ++||||+++++++.+.+..|+++||+++|+|...+.....+++.....+..+++.++.++|..   
T Consensus        39 ~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~---  115 (316)
T cd05619          39 VECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---  115 (316)
T ss_pred             HHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            3445556667765 489999999999999999999999999999988776666788888888999999999887753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|||+||+||+++.+          ..++++|||+++.
T Consensus       116 ------------------------------~ivHrdikp~Nil~~~~----------~~~kl~Dfg~~~~  145 (316)
T cd05619         116 ------------------------------GIVYRDLKLDNILLDTD----------GHIKIADFGMCKE  145 (316)
T ss_pred             ------------------------------CeEeCCCCHHHEEECCC----------CCEEEccCCcceE
Confidence                                          68999999999999854          3789999998863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.59  E-value=6.8e-15  Score=108.87  Aligned_cols=111  Identities=30%  Similarity=0.466  Sum_probs=94.0

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      +.+....+.+|++++++++||||+++++++.+++..++++||++++++..++...  ..+++.....+..+++.++.++|
T Consensus        39 ~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh  118 (256)
T cd08221          39 SEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH  118 (256)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            4556677889999999999999999999999999999999999999998876543  34677888888899999998876


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|++|+|++++.+          ..++++|||+++..
T Consensus       119 ~~---------------------------------~i~h~dl~p~ni~~~~~----------~~~kl~d~~~~~~~  151 (256)
T cd08221         119 KA---------------------------------GILHRDIKTLNIFLTKA----------GLIKLGDFGISKIL  151 (256)
T ss_pred             hC---------------------------------CccccCCChHhEEEeCC----------CCEEECcCcceEEc
Confidence            42                                 57999999999999854          36899999988643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>KOG4278|consensus

Probab=99.59  E-value=4.2e-16  Score=126.04  Aligned_cols=109  Identities=28%  Similarity=0.454  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .++-|-.|.++++.++|||+|+|+++|..+.+.|++.||+.+|+|.+|++..  ...+...+..+..||..++.++... 
T Consensus       306 eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk-  384 (1157)
T KOG4278|consen  306 EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK-  384 (1157)
T ss_pred             hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh-
Confidence            3567788999999999999999999999999999999999999999998753  3345556666777887777665432 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      .+||||+.++|+|++.+          ..+|++|||++|+.+
T Consensus       385 --------------------------------nFIHRDLAARNCLVgEn----------hiVKvADFGLsRlMt  416 (1157)
T KOG4278|consen  385 --------------------------------NFIHRDLAARNCLVGEN----------HIVKVADFGLSRLMT  416 (1157)
T ss_pred             --------------------------------hhhhhhhhhhhcccccc----------ceEEeeccchhhhhc
Confidence                                            46999999999999854          378999999999754

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.59  E-value=6.2e-15  Score=116.78  Aligned_cols=49  Identities=35%  Similarity=0.532  Sum_probs=43.1

Q ss_pred             HHHHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEE
Q psy11428          8 SIVLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYL   56 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l   56 (160)
                      ....+..|+++++.+. ||||+++++++...+.+|+++||+++|+|..++
T Consensus        83 ~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l  132 (400)
T cd05105          83 EKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYL  132 (400)
T ss_pred             HHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHH
Confidence            3456778999999996 999999999999999999999999999986654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.59  E-value=9.5e-15  Score=109.81  Aligned_cols=110  Identities=30%  Similarity=0.516  Sum_probs=93.2

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ...+..+.+|+++++.++|||++++++.+..++..|+++||++++++...+.. .+.+++.....+..+++.++.++|..
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~  122 (282)
T cd06643          43 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN  122 (282)
T ss_pred             HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            45567788899999999999999999999999999999999999998765433 35678888899999999999988752


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|++|+|++++.+          ..++++|||+++..
T Consensus       123 ---------------------------------~i~H~dlkp~nili~~~----------~~~kl~dfg~~~~~  153 (282)
T cd06643         123 ---------------------------------KIIHRDLKAGNILFTLD----------GDIKLADFGVSAKN  153 (282)
T ss_pred             ---------------------------------CeeecCCCcccEEEccC----------CCEEEccccccccc
Confidence                                             68999999999999754          37899999998643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.59  E-value=6e-15  Score=111.37  Aligned_cols=109  Identities=27%  Similarity=0.443  Sum_probs=92.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-------------CCCHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-------------TLSEDTIRIFLK   72 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-------------~~~~~~~~~~~~   72 (160)
                      ......+..|++++++++|||++++++.+...+..++++||++++++..++...+             .+++.....+..
T Consensus        48 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  127 (288)
T cd05093          48 DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQ  127 (288)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHH
Confidence            3456678889999999999999999999999999999999999999877664332             367888888999


Q ss_pred             HHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeee
Q psy11428         73 QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADF  152 (160)
Q Consensus        73 ~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~df  152 (160)
                      +++.++.++|..                                 +++|||+||+|++++.+          ..++++||
T Consensus       128 ql~~aL~~lH~~---------------------------------~i~H~dlkp~Nili~~~----------~~~kl~df  164 (288)
T cd05093         128 QIAAGMVYLASQ---------------------------------HFVHRDLATRNCLVGEN----------LLVKIGDF  164 (288)
T ss_pred             HHHHHHHHHHhC---------------------------------CeeecccCcceEEEccC----------CcEEeccC
Confidence            999999887642                                 68999999999999754          37899999


Q ss_pred             ecccc
Q psy11428        153 GFARF  157 (160)
Q Consensus       153 g~a~~  157 (160)
                      |+++.
T Consensus       165 g~~~~  169 (288)
T cd05093         165 GMSRD  169 (288)
T ss_pred             Ccccc
Confidence            99864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.59  E-value=5.6e-15  Score=110.18  Aligned_cols=111  Identities=36%  Similarity=0.556  Sum_probs=93.4

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      +.+....+.+|++.+++++||||+++++.+...+..++++||+++|+|.+++...  ..++......+..+++.++.++|
T Consensus        41 ~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh  120 (259)
T PF07714_consen   41 SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH  120 (259)
T ss_dssp             SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH
T ss_pred             ccccceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3456788999999999999999999999999888899999999999999888765  56788889999999999999987


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|++++++||+++.+          ..+||+|||+++..
T Consensus       121 ~~---------------------------------~iiH~~l~~~nill~~~----------~~~Kl~~f~~~~~~  153 (259)
T PF07714_consen  121 SN---------------------------------NIIHGNLSPSNILLDSN----------GQVKLSDFGLSRPI  153 (259)
T ss_dssp             HT---------------------------------TEEEST-SGGGEEEETT----------TEEEEESTTTGEET
T ss_pred             cc---------------------------------ccccccccccccccccc----------cccccccccccccc
Confidence            53                                 58999999999999854          48999999998754

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.59  E-value=7.7e-15  Score=109.75  Aligned_cols=106  Identities=33%  Similarity=0.530  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----------------CCCHHHHHHH
Q psy11428          8 SIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------------TLSEDTIRIF   70 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~~~~   70 (160)
                      ....+..|+++++++ +||||+++++++...+..|+++|+++++++.+++....                .++......+
T Consensus        38 ~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  117 (270)
T cd05047          38 DHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF  117 (270)
T ss_pred             HHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHH
Confidence            445677899999999 79999999999999999999999999999877664322                3567778888


Q ss_pred             HHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEe
Q psy11428         71 LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIA  150 (160)
Q Consensus        71 ~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~  150 (160)
                      ..+++.++.++|..                                 +++|+|+||+|++++.+          ..++++
T Consensus       118 ~~~i~~al~~lH~~---------------------------------~i~H~dikp~nili~~~----------~~~kl~  154 (270)
T cd05047         118 AADVARGMDYLSQK---------------------------------QFIHRDLAARNILVGEN----------YVAKIA  154 (270)
T ss_pred             HHHHHHHHHHHHHC---------------------------------CEeecccccceEEEcCC----------CeEEEC
Confidence            89999999887742                                 68999999999999744          478999


Q ss_pred             eeeccc
Q psy11428        151 DFGFAR  156 (160)
Q Consensus       151 dfg~a~  156 (160)
                      |||+++
T Consensus       155 dfgl~~  160 (270)
T cd05047         155 DFGLSR  160 (270)
T ss_pred             CCCCcc
Confidence            999874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.59  E-value=7.6e-15  Score=110.97  Aligned_cols=107  Identities=27%  Similarity=0.430  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----------------cCCCHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----------------GTLSEDTIRIFL   71 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~   71 (160)
                      ....+.+|+++++.++||||+++++.+......++++||++++++.+++..+                +.+++.....+.
T Consensus        50 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  129 (291)
T cd05094          50 ARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA  129 (291)
T ss_pred             HHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHH
Confidence            3456788999999999999999999999999999999999999988776432                235677788889


Q ss_pred             HHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEee
Q psy11428         72 KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIAD  151 (160)
Q Consensus        72 ~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~d  151 (160)
                      .+++.++.++|..                                 +++|+|+||+|++++.+          ..++++|
T Consensus       130 ~~i~~al~~lH~~---------------------------------~i~H~dlkp~Nil~~~~----------~~~~l~d  166 (291)
T cd05094         130 SQIASGMVYLASQ---------------------------------HFVHRDLATRNCLVGAN----------LLVKIGD  166 (291)
T ss_pred             HHHHHHHHHHHhC---------------------------------CeeecccCcceEEEccC----------CcEEECC
Confidence            9999999887643                                 68999999999999854          3789999


Q ss_pred             eecccc
Q psy11428        152 FGFARF  157 (160)
Q Consensus       152 fg~a~~  157 (160)
                      ||+++.
T Consensus       167 fg~a~~  172 (291)
T cd05094         167 FGMSRD  172 (291)
T ss_pred             CCcccc
Confidence            999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.59  E-value=7.3e-15  Score=108.92  Aligned_cols=106  Identities=27%  Similarity=0.491  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+.+++.++||||+++++++...+..++++||++++++..++.. .+.+++.....+..+++.++.++|..    
T Consensus        44 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~----  119 (256)
T cd05114          44 EDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN----  119 (256)
T ss_pred             HHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            4567899999999999999999999999999999999999999877653 34567788888889999999887642    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|+|++|+|++++.+          ..++++|||+++..
T Consensus       120 -----------------------------~i~H~dl~p~ni~i~~~----------~~~kl~d~g~~~~~  150 (256)
T cd05114         120 -----------------------------SFIHRDLAARNCLVSST----------GVVKVSDFGMTRYV  150 (256)
T ss_pred             -----------------------------CccccccCcceEEEcCC----------CeEEECCCCCcccc
Confidence                                         58999999999999744          37899999988643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.58  E-value=5.6e-15  Score=110.07  Aligned_cols=108  Identities=32%  Similarity=0.505  Sum_probs=92.7

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+++|+.+++.++|||++++++++..++..++++||++++++...+...+.+++.....+..+++.++.++|..   
T Consensus        49 ~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---  125 (267)
T cd06646          49 DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK---  125 (267)
T ss_pred             hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34567789999999999999999999999999999999999999987766666788888888999999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|.|++++.+          ..++++|||+++.+
T Consensus       126 ------------------------------~i~H~dl~p~nill~~~----------~~~~l~dfg~~~~~  156 (267)
T cd06646         126 ------------------------------GKMHRDIKGANILLTDN----------GDVKLADFGVAAKI  156 (267)
T ss_pred             ------------------------------CccccCCCHHHEEECCC----------CCEEECcCccceee
Confidence                                          68999999999999754          36899999988643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.58  E-value=9.9e-15  Score=108.59  Aligned_cols=107  Identities=27%  Similarity=0.440  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|+++++.++||||+++++.+. ....++++||++++++..++.. ...+++.....+..+++.++.++|..  
T Consensus        38 ~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--  114 (257)
T cd05115          38 VRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK--  114 (257)
T ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc--
Confidence            3456788999999999999999999875 4578999999999999887653 34678888889999999999887642  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|+||+|++++.+          ..++++|||+++.+
T Consensus       115 -------------------------------~i~H~dlkp~nil~~~~----------~~~kl~dfg~~~~~  145 (257)
T cd05115         115 -------------------------------NFVHRDLAARNVLLVNQ----------HYAKISDFGLSKAL  145 (257)
T ss_pred             -------------------------------CeeecccchheEEEcCC----------CcEEeccCCccccc
Confidence                                           68999999999999743          37899999998643

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.58  E-value=7.3e-15  Score=111.90  Aligned_cols=109  Identities=33%  Similarity=0.513  Sum_probs=92.1

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      +....+.+|+++++++ +||||+++++++...+..|+++||++++++..++....  .+++.....+..+++.++.++|.
T Consensus        80 ~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~  159 (302)
T cd05055          80 SEREALMSELKIMSHLGNHENIVNLLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLAS  159 (302)
T ss_pred             HHHHHHHHHHHHHHhccCCCCcceEEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4456788999999999 79999999999999999999999999999987765432  26788888899999999998875


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|+||+|++++.+          ..++++|||+++.+
T Consensus       160 ~---------------------------------~ivH~dlkp~Nil~~~~----------~~~~l~dfg~~~~~  191 (302)
T cd05055         160 K---------------------------------NCIHRDLAARNVLLTHG----------KIVKICDFGLARDI  191 (302)
T ss_pred             C---------------------------------CeehhhhccceEEEcCC----------CeEEECCCcccccc
Confidence            3                                 58999999999999743          37899999998744

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.58  E-value=6.4e-15  Score=112.15  Aligned_cols=106  Identities=34%  Similarity=0.518  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++||||+++++++..++..++++|+++|+++..++...+.+++.....+..+++.++.++|..   
T Consensus        44 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---  120 (305)
T cd05609          44 QIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY---  120 (305)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34566688899999999999999999999999999999999999988876667788888888888999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                    +++|+|++|+||+++.+          +.++++|||+++
T Consensus       121 ------------------------------~i~H~dl~p~NIll~~~----------~~~~l~dfg~~~  149 (305)
T cd05609         121 ------------------------------GIVHRDLKPDNLLITSM----------GHIKLTDFGLSK  149 (305)
T ss_pred             ------------------------------CccccCCchHHEEECCC----------CCEEEeeCCCcc
Confidence                                          58999999999999754          378999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.58  E-value=5.1e-15  Score=113.74  Aligned_cols=106  Identities=29%  Similarity=0.428  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ......|.+++..+ +||+|+.+++++.+.+..|+++||+++|++..++...+.+++.....+..+++.++.++|..   
T Consensus        44 ~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---  120 (323)
T cd05616          44 VECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK---  120 (323)
T ss_pred             HHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34455666777666 58899999999999999999999999999987776667788888999999999999988752   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|||+||+||+++.+          ..++|+|||+++.
T Consensus       121 ------------------------------~ivHrDlkp~Nill~~~----------~~~kL~DfG~~~~  150 (323)
T cd05616         121 ------------------------------GIIYRDLKLDNVMLDSE----------GHIKIADFGMCKE  150 (323)
T ss_pred             ------------------------------CEEecCCCHHHeEECCC----------CcEEEccCCCcee
Confidence                                          68999999999999854          3789999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.58  E-value=2.8e-15  Score=118.23  Aligned_cols=103  Identities=26%  Similarity=0.420  Sum_probs=88.0

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         12 TRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                      ..+|+++++.++||||+++++.+......|++++++. +++..++...+.+++.....+..+++.++.++|..       
T Consensus       133 ~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~-------  204 (392)
T PHA03207        133 PGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR-------  204 (392)
T ss_pred             HHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-------
Confidence            4679999999999999999999999999999999986 56666665556788899999999999999988752       


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                +++||||||+||+++.+          ..++|+|||+++.+
T Consensus       205 --------------------------givHrDlkp~Nill~~~----------~~~~l~DfG~a~~~  235 (392)
T PHA03207        205 --------------------------GIIHRDVKTENIFLDEP----------ENAVLGDFGAACKL  235 (392)
T ss_pred             --------------------------CccccCCCHHHEEEcCC----------CCEEEccCcccccc
Confidence                                      68999999999999754          37899999998654

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.58  E-value=8e-15  Score=110.08  Aligned_cols=108  Identities=28%  Similarity=0.448  Sum_probs=90.1

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----------------cCCCHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----------------GTLSEDTIRIF   70 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~   70 (160)
                      .....+.+|++.++.++||||+++++++......|+++||++++++..++...                +.++......+
T Consensus        50 ~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  129 (283)
T cd05048          50 KVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHI  129 (283)
T ss_pred             HHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHH
Confidence            34456788999999999999999999999999999999999999988766433                34566777788


Q ss_pred             HHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEe
Q psy11428         71 LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIA  150 (160)
Q Consensus        71 ~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~  150 (160)
                      ..+++.++.++|..                                 +++|+|+||+|++++.+          ..++|+
T Consensus       130 ~~~l~~al~~lH~~---------------------------------~i~H~dlkp~Nil~~~~----------~~~~L~  166 (283)
T cd05048         130 AIQIAAGMEYLSSH---------------------------------HFVHRDLAARNCLVGEG----------LTVKIS  166 (283)
T ss_pred             HHHHHHHHHHHHhC---------------------------------CeeccccccceEEEcCC----------CcEEEC
Confidence            89999999887753                                 58999999999999854          378999


Q ss_pred             eeecccc
Q psy11428        151 DFGFARF  157 (160)
Q Consensus       151 dfg~a~~  157 (160)
                      |||+++.
T Consensus       167 dfg~~~~  173 (283)
T cd05048         167 DFGLSRD  173 (283)
T ss_pred             CCcceee
Confidence            9999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.58  E-value=1.2e-14  Score=109.29  Aligned_cols=110  Identities=31%  Similarity=0.495  Sum_probs=90.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeec--CCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~--~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ......+.+|+++++.++|||++++.+++..  ....++++||++++++..++... +.+++.....+..+++.++.++|
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH  125 (284)
T cd05081          46 AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG  125 (284)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH
Confidence            3445677899999999999999999987643  35689999999999998876543 34678888888899999999887


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|+||+||+++.+          ..++++|||+++.+
T Consensus       126 ~~---------------------------------~i~H~dlkp~nili~~~----------~~~~l~dfg~~~~~  158 (284)
T cd05081         126 SK---------------------------------RYVHRDLATRNILVESE----------NRVKIGDFGLTKVL  158 (284)
T ss_pred             HC---------------------------------CceeccCCHhhEEECCC----------CeEEECCCcccccc
Confidence            53                                 68999999999999744          37899999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.58  E-value=6.5e-15  Score=109.26  Aligned_cols=106  Identities=25%  Similarity=0.463  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+++++.++||||+++++.+...+..|+++|+++++++.+++..+ +.+++.....+..+++.++.++|..    
T Consensus        44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----  119 (256)
T cd05059          44 DDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN----  119 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            35677999999999999999999999999999999999999998876543 3567888888899999999887753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|+|++|+|++++.+          ..++++|||+++..
T Consensus       120 -----------------------------~i~H~dl~p~ni~i~~~----------~~~kl~dfg~~~~~  150 (256)
T cd05059         120 -----------------------------GFIHRDLAARNCLVGED----------NVVKVSDFGLARYV  150 (256)
T ss_pred             -----------------------------CcccccccHhhEEECCC----------CcEEECCcccceec
Confidence                                         58999999999999754          37899999988643

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.58  E-value=7.4e-15  Score=109.38  Aligned_cols=109  Identities=28%  Similarity=0.454  Sum_probs=92.2

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .....+.+|++.++.++|||++++++.+...+..++++||++++++.+++...  ..+++.....+..++++++.++|..
T Consensus        44 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~  123 (263)
T cd05052          44 MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK  123 (263)
T ss_pred             hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34567788999999999999999999999999999999999999998876543  3467778888899999999988743


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|+||+|++++.+          ..++++|||+++..
T Consensus       124 ---------------------------------~i~H~dlkp~nil~~~~----------~~~kl~df~~~~~~  154 (263)
T cd05052         124 ---------------------------------NFIHRDLAARNCLVGEN----------HLVKVADFGLSRLM  154 (263)
T ss_pred             ---------------------------------CEeecccCcceEEEcCC----------CcEEeCCCcccccc
Confidence                                             68999999999999743          37899999998654

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.58  E-value=9.1e-15  Score=108.01  Aligned_cols=110  Identities=27%  Similarity=0.437  Sum_probs=93.2

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ......+.+|+++++.++|||++++++++...+..|+++||++++++..++...  ..+++.....+..+++.++.++|.
T Consensus        40 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~  119 (256)
T cd08529          40 RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHS  119 (256)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            455677888999999999999999999999999999999999999998876543  456778888888899999988774


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|++|+||+++.+          ..++++|||+++.+
T Consensus       120 ~---------------------------------~i~h~dl~~~nili~~~----------~~~~l~df~~~~~~  151 (256)
T cd08529         120 K---------------------------------KILHRDIKSLNLFLDAY----------DNVKIGDLGVAKLL  151 (256)
T ss_pred             C---------------------------------CcccCCCCcceEEEeCC----------CCEEEcccccceec
Confidence            2                                 68999999999999854          37899999988654

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.57  E-value=1.4e-14  Score=109.32  Aligned_cols=110  Identities=27%  Similarity=0.525  Sum_probs=90.6

Q ss_pred             hhHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee----------------ecCCCHHHHH
Q psy11428          6 KSSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS----------------KGTLSEDTIR   68 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~----------------~~~~~~~~~~   68 (160)
                      ......+.+|+.+++.+ +||||+++++.+..++..++++||++++++..++..                .+.+++....
T Consensus        56 ~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  135 (293)
T cd05053          56 EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLV  135 (293)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHH
Confidence            34455677899999999 799999999999999999999999999998776532                2345677778


Q ss_pred             HHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEE
Q psy11428         69 IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLK  148 (160)
Q Consensus        69 ~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~  148 (160)
                      .+..+++.++.++|..                                 +++|+|+||+|++++.+          ..++
T Consensus       136 ~i~~qi~~al~~LH~~---------------------------------~ivH~dlkp~Nil~~~~----------~~~k  172 (293)
T cd05053         136 SFAYQVARGMEFLASK---------------------------------KCIHRDLAARNVLVTED----------HVMK  172 (293)
T ss_pred             HHHHHHHHHHHHHHHC---------------------------------CccccccceeeEEEcCC----------CeEE
Confidence            8889999999887642                                 68999999999999743          3789


Q ss_pred             Eeeeeccccc
Q psy11428        149 IADFGFARFL  158 (160)
Q Consensus       149 l~dfg~a~~~  158 (160)
                      ++|||+++.+
T Consensus       173 L~Dfg~~~~~  182 (293)
T cd05053         173 IADFGLARDI  182 (293)
T ss_pred             eCcccccccc
Confidence            9999998643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.57  E-value=8.3e-15  Score=110.96  Aligned_cols=109  Identities=28%  Similarity=0.450  Sum_probs=89.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec------------CCCHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG------------TLSEDTIRIFLKQI   74 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~------------~~~~~~~~~~~~~~   74 (160)
                      .....+.+|+++++.++|||++++++.+...+..++++||++++++..++....            ..+......+..++
T Consensus        59 ~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i  138 (295)
T cd05097          59 TARNDFLKEIKIMSRLKNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQI  138 (295)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHH
Confidence            345567889999999999999999999999999999999999999876653221            24566677788899


Q ss_pred             HHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeec
Q psy11428         75 VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGF  154 (160)
Q Consensus        75 ~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~  154 (160)
                      +.++.++|..                                 +++|+|+||+|++++.+          ..++++|||+
T Consensus       139 ~~al~~lH~~---------------------------------~i~H~dlkp~Nill~~~----------~~~kl~dfg~  175 (295)
T cd05097         139 ASGMKYLASL---------------------------------NFVHRDLATRNCLVGNH----------YTIKIADFGM  175 (295)
T ss_pred             HHHHHHHHhc---------------------------------CeeccccChhhEEEcCC----------CcEEeccccc
Confidence            9999887742                                 58999999999999744          3689999999


Q ss_pred             cccc
Q psy11428        155 ARFL  158 (160)
Q Consensus       155 a~~~  158 (160)
                      ++.+
T Consensus       176 ~~~~  179 (295)
T cd05097         176 SRNL  179 (295)
T ss_pred             cccc
Confidence            8643

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.57  E-value=9.1e-15  Score=110.79  Aligned_cols=109  Identities=28%  Similarity=0.447  Sum_probs=90.2

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-----------CCCHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-----------TLSEDTIRIFLKQI   74 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-----------~~~~~~~~~~~~~~   74 (160)
                      +.....+.+|+++++.++||||+++++.+...+..++++|+++++++..++....           .++......+..++
T Consensus        60 ~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  139 (296)
T cd05095          60 KNARNDFLKEIKIMSRLKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQI  139 (296)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHH
Confidence            3445678899999999999999999999999999999999999999977664432           24456778888899


Q ss_pred             HHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeec
Q psy11428         75 VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGF  154 (160)
Q Consensus        75 ~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~  154 (160)
                      +.++.++|..                                 +++|+|+||+|++++.+          ..++++|||+
T Consensus       140 ~~al~~lH~~---------------------------------~i~H~dlkp~Nili~~~----------~~~~l~dfg~  176 (296)
T cd05095         140 ASGMKYLSSL---------------------------------NFVHRDLATRNCLVGKN----------YTIKIADFGM  176 (296)
T ss_pred             HHHHHHHHHC---------------------------------CeecccCChheEEEcCC----------CCEEeccCcc
Confidence            9999887742                                 58999999999999743          3789999999


Q ss_pred             ccc
Q psy11428        155 ARF  157 (160)
Q Consensus       155 a~~  157 (160)
                      ++.
T Consensus       177 ~~~  179 (296)
T cd05095         177 SRN  179 (296)
T ss_pred             ccc
Confidence            864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.57  E-value=9.6e-15  Score=110.28  Aligned_cols=109  Identities=27%  Similarity=0.448  Sum_probs=89.9

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee------------------------cCC
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK------------------------GTL   62 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~------------------------~~~   62 (160)
                      .....+.+|+.+++.++||||+++++.+...+..++++||++++++..++...                        ..+
T Consensus        45 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  124 (290)
T cd05045          45 SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERAL  124 (290)
T ss_pred             HHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCcccccc
Confidence            34567888999999999999999999999999999999999999987654321                        235


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCC
Q psy11428         63 SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQP  142 (160)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~  142 (160)
                      +......+..+++.++.++|..                                 +++|+|++|+|++++.+        
T Consensus       125 ~~~~~~~i~~~i~~~l~~LH~~---------------------------------~ivH~dikp~nill~~~--------  163 (290)
T cd05045         125 TMGDLISFAWQISRGMQYLAEM---------------------------------KLVHRDLAARNVLVAEG--------  163 (290)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHC---------------------------------CeehhhhhhheEEEcCC--------
Confidence            6677788889999999887742                                 68999999999999743        


Q ss_pred             CCceEEEeeeeccccc
Q psy11428        143 QHIKLKIADFGFARFL  158 (160)
Q Consensus       143 ~~~~~~l~dfg~a~~~  158 (160)
                        ..++|+|||+++.+
T Consensus       164 --~~~kl~dfg~~~~~  177 (290)
T cd05045         164 --RKMKISDFGLSRDV  177 (290)
T ss_pred             --CcEEeccccccccc
Confidence              37899999998643

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.57  E-value=1.2e-14  Score=108.77  Aligned_cols=107  Identities=27%  Similarity=0.392  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec---------CCCHHHHHHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG---------TLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~---------~~~~~~~~~~~~~~~~~~   78 (160)
                      ....+..|++++++++|||++++++.+...+..|+++|++++++|..++....         .+++.....+..+++.++
T Consensus        51 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l  130 (275)
T cd05046          51 LQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGM  130 (275)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHH
Confidence            45678889999999999999999999999899999999999999988765444         578888888999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      .++|..                                 +++|+|+||+|++++.+          ..++++|||+++.
T Consensus       131 ~~LH~~---------------------------------~i~H~dlkp~Nili~~~----------~~~~l~~~~~~~~  166 (275)
T cd05046         131 DHLSNA---------------------------------RFVHRDLAARNCLVSSQ----------REVKVSLLSLSKD  166 (275)
T ss_pred             HHhhhc---------------------------------CcccCcCccceEEEeCC----------CcEEEcccccccc
Confidence            987743                                 58999999999999854          3689999998753

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.57  E-value=1.1e-14  Score=108.24  Aligned_cols=106  Identities=24%  Similarity=0.403  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+.+|+++++.++|||++++++.+...+..|+++|+++++++.+++....  .++......+..+++.++.++|..   
T Consensus        46 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---  122 (261)
T cd05068          46 KDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---  122 (261)
T ss_pred             HHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            456779999999999999999999999999999999999999988875543  567888888999999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.++          .++++|||+++.+
T Consensus       123 ------------------------------~i~H~dl~p~Nil~~~~~----------~~~l~dfg~~~~~  153 (261)
T cd05068         123 ------------------------------NYIHRDLAARNVLVGENN----------ICKVADFGLARVI  153 (261)
T ss_pred             ------------------------------CeeeccCCcceEEEcCCC----------CEEECCcceEEEc
Confidence                                          689999999999998543          6899999998654

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.57  E-value=7.9e-15  Score=108.67  Aligned_cols=109  Identities=30%  Similarity=0.512  Sum_probs=93.7

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+.+|+.+++.++|||++++++.+..+...|+++|+++++++..++... ..+++.....+..+++.++.++|.. 
T Consensus        42 ~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~-  120 (262)
T cd06613          42 DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET-  120 (262)
T ss_pred             hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            35677889999999999999999999999999999999999999998876554 5688888899999999999887642 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+||+++.+          ..++++|||++..+
T Consensus       121 --------------------------------~i~h~dl~p~ni~i~~~----------~~~~l~d~g~~~~~  151 (262)
T cd06613         121 --------------------------------GKIHRDIKGANILLTED----------GDVKLADFGVSAQL  151 (262)
T ss_pred             --------------------------------CceecCCChhhEEECCC----------CCEEECccccchhh
Confidence                                            57999999999999854          36899999987643

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.57  E-value=1.3e-14  Score=110.98  Aligned_cols=109  Identities=25%  Similarity=0.479  Sum_probs=89.8

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----------------cCCCHHHHHH
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----------------GTLSEDTIRI   69 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----------------~~~~~~~~~~   69 (160)
                      ..+..+.+|+++++.+ +||||+++++++..++..|+++||++++++..++...                ..++......
T Consensus        59 ~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  138 (314)
T cd05099          59 KDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVS  138 (314)
T ss_pred             HHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHH
Confidence            4456678899999999 6999999999999999999999999999987766432                2356667777


Q ss_pred             HHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEE
Q psy11428         70 FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKI  149 (160)
Q Consensus        70 ~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l  149 (160)
                      +..+++.++.++|..                                 +++|+|+||+|++++.+          ..+++
T Consensus       139 ~~~qi~~aL~~lH~~---------------------------------gi~H~dlkp~Nill~~~----------~~~kL  175 (314)
T cd05099         139 CAYQVARGMEYLESR---------------------------------RCIHRDLAARNVLVTED----------NVMKI  175 (314)
T ss_pred             HHHHHHHHHHHHHHC---------------------------------CeeeccccceeEEEcCC----------CcEEE
Confidence            888999999887742                                 68999999999999754          37899


Q ss_pred             eeeeccccc
Q psy11428        150 ADFGFARFL  158 (160)
Q Consensus       150 ~dfg~a~~~  158 (160)
                      +|||+++..
T Consensus       176 ~Dfg~~~~~  184 (314)
T cd05099         176 ADFGLARGV  184 (314)
T ss_pred             ccccccccc
Confidence            999998743

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.57  E-value=6.8e-15  Score=110.02  Aligned_cols=106  Identities=21%  Similarity=0.311  Sum_probs=87.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ....+.+|..+++.++||||+++++.+......|+++||+++++|..++...    ...+......+..+++.++.++|.
T Consensus        38 ~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~  117 (268)
T cd05086          38 EQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHK  117 (268)
T ss_pred             HHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence            4567788888899999999999999999999999999999999998776532    234455666778889999988774


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      .                                 +++|+|+||+|++++.+          ..++++|||++.
T Consensus       118 ~---------------------------------~i~H~dikp~nil~~~~----------~~~~l~Dfg~~~  147 (268)
T cd05086         118 H---------------------------------NFLHSDLALRNCFLTSD----------LTVKVGDYGIGP  147 (268)
T ss_pred             C---------------------------------CeeccCCccceEEEcCC----------ccEEeccccccc
Confidence            2                                 57999999999999743          378999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.57  E-value=4.6e-15  Score=114.10  Aligned_cols=108  Identities=28%  Similarity=0.418  Sum_probs=90.7

Q ss_pred             hHHHHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ..+.....|.+++..+. ||+|+.+++++.+.+..|+++||+++|++..++...+.+++.....++.+++.++.++|.. 
T Consensus        42 ~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~-  120 (323)
T cd05615          42 DDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR-  120 (323)
T ss_pred             hHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            34455677888887775 5678889999999999999999999999988776667789999999999999999988753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++|||+||+||+++.+          ..++|+|||+++.
T Consensus       121 --------------------------------~ivHrDikp~Nill~~~----------~~ikL~Dfg~~~~  150 (323)
T cd05615         121 --------------------------------GIIYRDLKLDNVMLDSE----------GHIKIADFGMCKE  150 (323)
T ss_pred             --------------------------------CeeccCCCHHHeEECCC----------CCEEEeccccccc
Confidence                                            68999999999999854          3789999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.57  E-value=1.3e-14  Score=109.33  Aligned_cols=110  Identities=27%  Similarity=0.458  Sum_probs=90.9

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ......+.+|+++++.++|||++++.+++...  ...++++||+++++|..++... ..++......+..+++.++.++|
T Consensus        47 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH  126 (284)
T cd05079          47 GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG  126 (284)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34456788999999999999999999988765  5689999999999998876443 34677888888999999998887


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|+||+|++++.+          ..++++|||+++.+
T Consensus       127 ~~---------------------------------gi~H~dlkp~Nil~~~~----------~~~~l~dfg~~~~~  159 (284)
T cd05079         127 SR---------------------------------QYVHRDLAARNVLVESE----------HQVKIGDFGLTKAI  159 (284)
T ss_pred             HC---------------------------------CeeecccchheEEEcCC----------CCEEECCCcccccc
Confidence            53                                 68999999999999743          36899999998644

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.57  E-value=8.7e-15  Score=108.92  Aligned_cols=107  Identities=30%  Similarity=0.444  Sum_probs=93.0

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+..|+++++.++|||++++.+.+.+.+..++++|+++++++..++...+.+++..+..+..+++.++.++|..   
T Consensus        45 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---  121 (265)
T cd06631          45 EYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN---  121 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            34567889999999999999999999999999999999999999988876667788888888999999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|++|.|++++.+          ..++++|||+++.
T Consensus       122 ------------------------------~i~H~dl~p~nil~~~~----------~~~~l~dfg~~~~  151 (265)
T cd06631         122 ------------------------------CVVHRDIKGNNVMLMPN----------GIIKLIDFGCARR  151 (265)
T ss_pred             ------------------------------CcccCCcCHHhEEECCC----------CeEEeccchhhHh
Confidence                                          57999999999999744          3789999998864

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.57  E-value=1.2e-14  Score=109.82  Aligned_cols=108  Identities=30%  Similarity=0.442  Sum_probs=91.9

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-----------CCCHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-----------TLSEDTIRIFLKQIV   75 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-----------~~~~~~~~~~~~~~~   75 (160)
                      .....+..|+++++.++|||++++++++...+..++++|+++++++..++....           .+++.....+..+++
T Consensus        61 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  140 (296)
T cd05051          61 NAREDFLKEVKILSRLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIA  140 (296)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHH
Confidence            445677889999999999999999999999999999999999999887765443           467888888999999


Q ss_pred             HHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecc
Q psy11428         76 QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA  155 (160)
Q Consensus        76 ~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a  155 (160)
                      .++.++|..                                 +++|+|+||+|++++.+          ..++++|||++
T Consensus       141 ~al~~LH~~---------------------------------~i~H~dlkp~Nili~~~----------~~~~l~dfg~~  177 (296)
T cd05051         141 SGMRYLESL---------------------------------NFVHRDLATRNCLVGKN----------YTIKIADFGMS  177 (296)
T ss_pred             HHHHHHHHc---------------------------------CccccccchhceeecCC----------CceEEccccce
Confidence            999988743                                 58999999999999844          37899999998


Q ss_pred             cc
Q psy11428        156 RF  157 (160)
Q Consensus       156 ~~  157 (160)
                      +.
T Consensus       178 ~~  179 (296)
T cd05051         178 RN  179 (296)
T ss_pred             ee
Confidence            64

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.57  E-value=9.3e-15  Score=108.58  Aligned_cols=106  Identities=25%  Similarity=0.451  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+.+++.++||||+++++++..+...++++|+++++++..++... ..+++..+..+..+++.++.++|..    
T Consensus        44 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~----  119 (256)
T cd05113          44 DEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK----  119 (256)
T ss_pred             HHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            45678999999999999999999999999999999999999988776543 3578888889999999999887642    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|+|++|.|++++.+          ..++++|||.++..
T Consensus       120 -----------------------------~i~H~dl~p~nili~~~----------~~~kl~d~g~~~~~  150 (256)
T cd05113         120 -----------------------------QFIHRDLAARNCLVDDQ----------GCVKVSDFGLSRYV  150 (256)
T ss_pred             -----------------------------CeeccccCcceEEEcCC----------CCEEECCCccceec
Confidence                                         68999999999999743          37899999988643

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.57  E-value=7.4e-15  Score=108.67  Aligned_cols=113  Identities=20%  Similarity=0.195  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+..|+.+++.++|||++++++++.. ...++++||++++++..++.... .++......+..+++.++.++|..   
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---  120 (259)
T cd05037          45 SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---  120 (259)
T ss_pred             HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---
Confidence            5677788999999999999999998877 77899999999999988776544 577888888889999999987742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|+||+|++++.++..   ......++++|||+++.+
T Consensus       121 ------------------------------~i~H~dlkp~Nill~~~~~~---~~~~~~~kl~Dfg~a~~~  158 (259)
T cd05037         121 ------------------------------KLVHGNVCGKNILVARYGLN---EGYVPFIKLSDPGIPITV  158 (259)
T ss_pred             ------------------------------CeecccCccceEEEecCccc---cCCceeEEeCCCCccccc
Confidence                                          68999999999999854311   112235899999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG4645|consensus

Probab=99.57  E-value=3.3e-16  Score=134.12  Aligned_cols=111  Identities=34%  Similarity=0.545  Sum_probs=96.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .+++...+.|+.+|..++|||+|+++++...+..++++||||.+|+|+..+...+...+...+.+..|+++++.++|.+ 
T Consensus      1275 ~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~- 1353 (1509)
T KOG4645|consen 1275 HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH- 1353 (1509)
T ss_pred             cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc-
Confidence            3455667788999999999999999999999999999999999999998875545567778888999999999998763 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      +++|||+||+|++++.++          .+|.+|||.|+.+.
T Consensus      1354 --------------------------------gIVHRDIK~aNI~Ld~~g----------~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1354 --------------------------------GIVHRDIKPANILLDFNG----------LIKYGDFGSAVKIK 1385 (1509)
T ss_pred             --------------------------------CceecCCCccceeeecCC----------cEEeecccceeEec
Confidence                                            799999999999998554          89999999998764

>KOG0690|consensus

Probab=99.57  E-value=4e-15  Score=112.62  Aligned_cols=102  Identities=33%  Similarity=0.479  Sum_probs=91.2

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         12 TRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                      .-.|-++|+..+||.+..|..+|+.++.+|.||||..||.|...+...+.+++...+.+..+++.++.++|..       
T Consensus       215 TlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~-------  287 (516)
T KOG0690|consen  215 TLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR-------  287 (516)
T ss_pred             hhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC-------
Confidence            3346678899999999999999999999999999999999999998888899999999999999999887643       


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                .+++||+|.+|++++.+          +++||.|||+++
T Consensus       288 --------------------------~ivYRDlKLENLlLDkD----------GHIKitDFGLCK  316 (516)
T KOG0690|consen  288 --------------------------NIVYRDLKLENLLLDKD----------GHIKITDFGLCK  316 (516)
T ss_pred             --------------------------CeeeeechhhhheeccC----------CceEeeecccch
Confidence                                      57999999999999854          489999999985

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.57  E-value=1.4e-14  Score=108.72  Aligned_cols=106  Identities=26%  Similarity=0.413  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----------CCCHHHHHHHHHHHHHHHH
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------TLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----------~~~~~~~~~~~~~~~~~~~   79 (160)
                      ..+.+|+.+++.++||||+++++++..+...++++||++++++..++...+          .........+..+++.++.
T Consensus        54 ~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  133 (277)
T cd05062          54 IEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMA  133 (277)
T ss_pred             HHHHHHHHHHHhCCCCCeeeEEEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHH
Confidence            346678899999999999999999999999999999999999887654321          2344566677888999998


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++|+|+||+|++++.+          ..++++|||+++.+
T Consensus       134 ~lH~~---------------------------------~~vH~dlkp~Nil~~~~----------~~~~l~dfg~~~~~  169 (277)
T cd05062         134 YLNAN---------------------------------KFVHRDLAARNCMVAED----------FTVKIGDFGMTRDI  169 (277)
T ss_pred             HHHHC---------------------------------CcccCCcchheEEEcCC----------CCEEECCCCCcccc
Confidence            87752                                 58999999999999854          37899999998643

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>KOG0662|consensus

Probab=99.57  E-value=1.2e-15  Score=107.13  Aligned_cols=103  Identities=40%  Similarity=0.680  Sum_probs=85.5

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         12 TRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      +-.|+++|+.++|.|||++++...+...+.+|+|++. .++..+..+ .|.+.....++++-|++.++..+|..      
T Consensus        48 alreicllkelkhknivrl~dvlhsdkkltlvfe~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh------  120 (292)
T KOG0662|consen   48 ALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH------  120 (292)
T ss_pred             HHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh------
Confidence            4469999999999999999999999999999999984 466555443 35677788889999999988876643      


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                 .++|||+||+|++++.|+          .+|++|||++|-+
T Consensus       121 ---------------------------nvlhrdlkpqnllin~ng----------elkladfglaraf  151 (292)
T KOG0662|consen  121 ---------------------------NVLHRDLKPQNLLINRNG----------ELKLADFGLARAF  151 (292)
T ss_pred             ---------------------------hhhhccCCcceEEeccCC----------cEEecccchhhhc
Confidence                                       479999999999998664          8999999999743

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.57  E-value=1.8e-14  Score=108.31  Aligned_cols=111  Identities=20%  Similarity=0.182  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+..+..+++.++||||+++++.+.++...++|+||++++++..++.. .+.+++.....+..+++.++.++|..    
T Consensus        61 ~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----  136 (274)
T cd05076          61 LAFFETASLMSQVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK----  136 (274)
T ss_pred             HHHHHHHHHHhcCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC----
Confidence            3566778889999999999999999999999999999999998776643 45678888888999999999887642    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                   +++|||+||+||+++..+..   ......++++|||++.
T Consensus       137 -----------------------------~iiH~dlkp~Nill~~~~~~---~~~~~~~kl~d~g~~~  172 (274)
T cd05076         137 -----------------------------NLVHGNVCAKNILLARLGLA---EGTSPFIKLSDPGVSF  172 (274)
T ss_pred             -----------------------------CccCCCCCcccEEEeccCcc---cCccceeeecCCcccc
Confidence                                         68999999999999853210   1123357999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.57  E-value=1.2e-14  Score=108.59  Aligned_cols=105  Identities=29%  Similarity=0.402  Sum_probs=86.0

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-----CCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-----TLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ...+.+|+.+++.++||||+++++++.+....++++||++++++..++....     ..+......+..+++.++.++|.
T Consensus        39 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~  118 (269)
T cd05087          39 QMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK  118 (269)
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence            3467779999999999999999999999999999999999999987764321     23455666778888888888764


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      .                                 +++|+|+||+|++++.+          ..++++|||+++
T Consensus       119 ~---------------------------------~i~H~dlkp~nil~~~~----------~~~kL~dfg~~~  148 (269)
T cd05087         119 N---------------------------------NFIHSDLALRNCLLTAD----------LTVKIGDYGLSH  148 (269)
T ss_pred             C---------------------------------CEeccccCcceEEEcCC----------CcEEECCccccc
Confidence            2                                 58999999999999743          378999999885

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.56  E-value=6.2e-15  Score=109.69  Aligned_cols=109  Identities=28%  Similarity=0.512  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+++|++.++.++|||++++++.+...+..++++|+++++++..++...+.+++.....++.+++.++.++|..   
T Consensus        46 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~---  122 (268)
T cd06630          46 VVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN---  122 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            45678899999999999999999999999999999999999999988776667788888888999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.++         ..++++|||.++.+
T Consensus       123 ------------------------------~i~H~~i~~~nil~~~~~---------~~~~l~dfg~~~~~  154 (268)
T cd06630         123 ------------------------------QIIHRDVKGANLLIDSTG---------QRLRIADFGAAARL  154 (268)
T ss_pred             ------------------------------CeecCCCCHHHEEEcCCC---------CEEEEccccccccc
Confidence                                          689999999999997432         36899999988654

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.56  E-value=1.5e-14  Score=106.76  Aligned_cols=108  Identities=35%  Similarity=0.543  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee---------cCCCHHHHHHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK---------GTLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~---------~~~~~~~~~~~~~~~~~~~   78 (160)
                      ....+.+|++.++.++|||++++++++......++++|+++++++..++...         ..+++.....+..+++.++
T Consensus        39 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al  118 (262)
T cd00192          39 ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGM  118 (262)
T ss_pred             HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHH
Confidence            3677888999999999999999999999999999999999999999887654         6678999999999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .++|..                                 +++|+|++|+|++++.+          ..++++|||.++..
T Consensus       119 ~~lH~~---------------------------------~i~H~di~p~nili~~~----------~~~~l~dfg~~~~~  155 (262)
T cd00192         119 EYLASK---------------------------------KFVHRDLAARNCLVGED----------LVVKISDFGLSRDV  155 (262)
T ss_pred             HHHHcC---------------------------------CcccCccCcceEEECCC----------CcEEEccccccccc
Confidence            887642                                 68999999999999854          47899999998754

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.56  E-value=1.5e-14  Score=107.54  Aligned_cols=108  Identities=32%  Similarity=0.534  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+.+++.++||||+++.+.+.++...|+++||++++++..++.....+++.....+..+++.++.++|..   
T Consensus        36 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~---  112 (262)
T cd05572          36 QQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNR---  112 (262)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---
Confidence            44567889999999999999999999999999999999999999998887666788888888999999999987753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+||+++.+          ..++++|||+++..
T Consensus       113 ------------------------------~~~h~dl~~~nilv~~~----------~~~~l~df~~~~~~  143 (262)
T cd05572         113 ------------------------------GIIYRDLKPENLLLDSN----------GYVKLVDFGFAKKL  143 (262)
T ss_pred             ------------------------------CcccCCCCHHHEEEcCC----------CCEEEeeCCccccc
Confidence                                          68999999999999743          37899999998754

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.56  E-value=6.4e-15  Score=115.30  Aligned_cols=106  Identities=38%  Similarity=0.583  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCC-----cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQ-----HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~-----~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ....+.+|+++++.++||||+++++++....     ..|+++||+. +++...+...+.+++..+..++.+++.++.++|
T Consensus        42 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH  120 (372)
T cd07853          42 SCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLH  120 (372)
T ss_pred             HHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            4456778999999999999999999888776     7899999986 466555555567888899999999999999887


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      ..                                 +++||||||+||+++.+          ..++|+|||+++.
T Consensus       121 ~~---------------------------------~ivH~dlkp~Nili~~~----------~~~kL~Dfg~a~~  152 (372)
T cd07853         121 SA---------------------------------GILHRDIKPGNLLVNSN----------CVLKICDFGLARV  152 (372)
T ss_pred             hC---------------------------------CeeCCCCChHHEEECCC----------CCEEeccccceee
Confidence            53                                 68999999999999854          3789999999864

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.56  E-value=8e-15  Score=118.02  Aligned_cols=104  Identities=27%  Similarity=0.397  Sum_probs=86.9

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ...+|+++|++++||||+++++++..++..+++++++. +++..++.. .+.+++..+..+..+++.++.++|..     
T Consensus       206 ~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-----  279 (461)
T PHA03211        206 SSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE-----  279 (461)
T ss_pred             CHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            34679999999999999999999999999999999985 566655443 24578888899999999999988753     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++||||||+||+++.+          ..++|+|||+++.+
T Consensus       280 ----------------------------gIvHrDLKP~NILl~~~----------~~vkL~DFGla~~~  310 (461)
T PHA03211        280 ----------------------------GIIHRDIKTENVLVNGP----------EDICLGDFGAACFA  310 (461)
T ss_pred             ----------------------------CEEECcCCHHHEEECCC----------CCEEEcccCCceec
Confidence                                        68999999999999754          36899999998754

>KOG4257|consensus

Probab=99.56  E-value=4.2e-15  Score=120.18  Aligned_cols=112  Identities=31%  Similarity=0.525  Sum_probs=96.9

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      +......+.+|.-+++++.||||++|+|++.+ .++|++||+++-|.|..|+.. +..++-.++..+.-|++.++.++++
T Consensus       431 t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeS  509 (974)
T KOG4257|consen  431 TPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLES  509 (974)
T ss_pred             ChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHh
Confidence            44558889999999999999999999999865 678999999999999998764 4567888889999999999999876


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccCC
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD  160 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~~  160 (160)
                      .                                 .++||||.++|||+.+..          -+|++|||++|.+.+
T Consensus       510 k---------------------------------rfVHRDIAaRNiLVsSp~----------CVKLaDFGLSR~~ed  543 (974)
T KOG4257|consen  510 K---------------------------------RFVHRDIAARNILVSSPQ----------CVKLADFGLSRYLED  543 (974)
T ss_pred             h---------------------------------chhhhhhhhhheeecCcc----------eeeecccchhhhccc
Confidence            4                                 579999999999998643          589999999998764

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.56  E-value=1.8e-14  Score=108.31  Aligned_cols=107  Identities=30%  Similarity=0.501  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeec--CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~--~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....+.+|+++++.++||||+++++.+..  ....++++|+++++++..++.. ..+++.....+..+++.++.++|.. 
T Consensus        49 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~-  126 (283)
T cd05080          49 NTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQ-  126 (283)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            34567789999999999999999997664  3468999999999999877643 4588888899999999999988743 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|+||+||+++.+          ..++++|||+++.+
T Consensus       127 --------------------------------~i~H~dlkp~Nili~~~----------~~~~l~dfg~~~~~  157 (283)
T cd05080         127 --------------------------------HYIHRDLAARNVLLDND----------RLVKIGDFGLAKAV  157 (283)
T ss_pred             --------------------------------CeeccccChheEEEcCC----------CcEEEeeccccccc
Confidence                                            68999999999999743          37899999998754

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG0986|consensus

Probab=99.56  E-value=4.9e-14  Score=110.35  Aligned_cols=107  Identities=31%  Similarity=0.494  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+.+|-.+|.+++.|.||.+-.+|++.+.+|+|+..+.||||..++...+  .+++.....+..+++-++..+|..   
T Consensus       230 ~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---  306 (591)
T KOG0986|consen  230 TMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---  306 (591)
T ss_pred             HHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---
Confidence            455667778889999999999999999999999999999999999998887  789999999999999999887753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                    .+++||+||+|||++.          +++++|+|.|+|..+.
T Consensus       307 ------------------------------~iVYRDLKPeNILLDd----------~GhvRISDLGLAvei~  338 (591)
T KOG0986|consen  307 ------------------------------RIVYRDLKPENILLDD----------HGHVRISDLGLAVEIP  338 (591)
T ss_pred             ------------------------------ceeeccCChhheeecc----------CCCeEeeccceEEecC
Confidence                                          5899999999999974          4589999999997554

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.56  E-value=1.6e-14  Score=107.81  Aligned_cols=110  Identities=25%  Similarity=0.422  Sum_probs=92.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+..|+.+++.++|||++++++++..+...++++|+++++++..++... +.++......+..+++.++.++|..
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~  125 (269)
T cd05065          46 EKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM  125 (269)
T ss_pred             HHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            445667888999999999999999999999999999999999999988776543 4567788888889999999887742


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       126 ---------------------------------g~~H~dl~p~nili~~~----------~~~kl~dfg~~~~~  156 (269)
T cd05065         126 ---------------------------------NYVHRDLAARNILVNSN----------LVCKVSDFGLSRFL  156 (269)
T ss_pred             ---------------------------------CEeecccChheEEEcCC----------CcEEECCCcccccc
Confidence                                             68999999999999743          37899999988654

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.56  E-value=3.5e-14  Score=106.76  Aligned_cols=105  Identities=23%  Similarity=0.368  Sum_probs=88.5

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|+++++.++|||++++++.+......++++||++++++..+    ..+++.....+..+++.++.++|..  
T Consensus        41 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~--  114 (279)
T cd06619          41 ELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSL--  114 (279)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            3445677899999999999999999999999999999999999988543    3467778888899999999887742  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|+||+|++++.+          ..++++|||++..+
T Consensus       115 -------------------------------~i~H~dlkp~Nill~~~----------~~~~l~dfg~~~~~  145 (279)
T cd06619         115 -------------------------------KILHRDVKPSNMLVNTR----------GQVKLCDFGVSTQL  145 (279)
T ss_pred             -------------------------------CEeeCCCCHHHEEECCC----------CCEEEeeCCcceec
Confidence                                           68999999999999854          37899999998643

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.56  E-value=1.6e-14  Score=108.41  Aligned_cols=109  Identities=30%  Similarity=0.525  Sum_probs=93.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+..|++++++++|||++++++.+..+...|+++||++++++..++... ..+++.....+..+++.++.++|..
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~  122 (280)
T cd06611          43 EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH  122 (280)
T ss_pred             HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            445667888999999999999999999999999999999999999998776543 4578889999999999999887753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                       +++|+|++|+|++++.+          ..++++|||++..
T Consensus       123 ---------------------------------~i~h~dl~p~nili~~~----------~~~~l~d~g~~~~  152 (280)
T cd06611         123 ---------------------------------KVIHRDLKAGNILLTLD----------GDVKLADFGVSAK  152 (280)
T ss_pred             ---------------------------------CcccCCCChhhEEECCC----------CCEEEccCccchh
Confidence                                             58999999999999744          3789999998754

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0612|consensus

Probab=99.56  E-value=1.6e-15  Score=128.62  Aligned_cols=104  Identities=35%  Similarity=0.479  Sum_probs=90.1

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      -|+.|-.++..-+.+=|++|+.+|+++..+|+||||++|||+...+...+.+++...+.+..+++-++..+|.       
T Consensus       121 ~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~-------  193 (1317)
T KOG0612|consen  121 CFREERDIMVFGNSEWIVQLHYAFQDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHS-------  193 (1317)
T ss_pred             HHHHHhHHHHcCCcHHHHHHHHHhcCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHh-------
Confidence            4566666776677888999999999999999999999999998888777789999999999999999888774       


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                .++||||+||+|||++.+          +++||+|||.+-.
T Consensus       194 --------------------------mgyVHRDiKPDNvLld~~----------GHikLADFGsClk  224 (1317)
T KOG0612|consen  194 --------------------------MGYVHRDIKPDNVLLDKS----------GHIKLADFGSCLK  224 (1317)
T ss_pred             --------------------------ccceeccCCcceeEeccc----------CcEeeccchhHHh
Confidence                                      379999999999999855          4899999998743

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.56  E-value=1.7e-14  Score=106.79  Aligned_cols=108  Identities=31%  Similarity=0.423  Sum_probs=91.4

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .....+.+|++.++.++||||+++++.+.. ...++++|+++++++..++...  ..++......+..+++.++.++|..
T Consensus        38 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~  116 (257)
T cd05040          38 DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK  116 (257)
T ss_pred             HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC
Confidence            345678889999999999999999998887 8999999999999998876543  3567888888899999999887742


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       117 ---------------------------------~i~H~di~p~nil~~~~----------~~~kl~dfg~~~~~  147 (257)
T cd05040         117 ---------------------------------RFIHRDLAARNILLASD----------DKVKIGDFGLMRAL  147 (257)
T ss_pred             ---------------------------------CccccccCcccEEEecC----------CEEEeccccccccc
Confidence                                             58999999999999854          37899999988654

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.56  E-value=1.6e-14  Score=109.00  Aligned_cols=108  Identities=27%  Similarity=0.402  Sum_probs=87.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----------CCCHHHHHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------TLSEDTIRIFLKQIVQA   77 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----------~~~~~~~~~~~~~~~~~   77 (160)
                      ....+.+|+..++.++||||+++++++......|+++||+++|+|..++...+          .........+..+++.+
T Consensus        52 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  131 (288)
T cd05061          52 ERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADG  131 (288)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHH
Confidence            34567789999999999999999999999999999999999999988775321          12344566778889999


Q ss_pred             HHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         78 LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        78 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +.++|..                                 +++|+|+||+|++++.+          ..++++|||+++.
T Consensus       132 l~~lH~~---------------------------------~i~H~dikp~nili~~~----------~~~~L~Dfg~~~~  168 (288)
T cd05061         132 MAYLNAK---------------------------------KFVHRDLAARNCMVAHD----------FTVKIGDFGMTRD  168 (288)
T ss_pred             HHHHHhC---------------------------------CCcCCCCChheEEEcCC----------CcEEECcCCcccc
Confidence            8887642                                 58999999999999854          3789999999874


Q ss_pred             c
Q psy11428        158 L  158 (160)
Q Consensus       158 ~  158 (160)
                      +
T Consensus       169 ~  169 (288)
T cd05061         169 I  169 (288)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.56  E-value=1.3e-14  Score=109.14  Aligned_cols=109  Identities=28%  Similarity=0.422  Sum_probs=91.2

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec---------------CCCHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG---------------TLSEDTIRIF   70 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~---------------~~~~~~~~~~   70 (160)
                      ......+.+|+++++.++||||+++++++......++++|+++++++..++...+               .++......+
T Consensus        48 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  127 (280)
T cd05092          48 ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAI  127 (280)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHH
Confidence            3456678899999999999999999999999999999999999999877665432               3567778888


Q ss_pred             HHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEe
Q psy11428         71 LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIA  150 (160)
Q Consensus        71 ~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~  150 (160)
                      ..+++.++.++|..                                 +++|+|+||+|++++.+          ..++++
T Consensus       128 ~~qi~~al~~LH~~---------------------------------~i~H~dlkp~nil~~~~----------~~~kL~  164 (280)
T cd05092         128 ASQIASGMVYLASL---------------------------------HFVHRDLATRNCLVGQG----------LVVKIG  164 (280)
T ss_pred             HHHHHHHHHHHHHC---------------------------------CeecccccHhhEEEcCC----------CCEEEC
Confidence            89999999887642                                 68999999999999743          378999


Q ss_pred             eeecccc
Q psy11428        151 DFGFARF  157 (160)
Q Consensus       151 dfg~a~~  157 (160)
                      |||+++.
T Consensus       165 dfg~~~~  171 (280)
T cd05092         165 DFGMSRD  171 (280)
T ss_pred             CCCceeE
Confidence            9998853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.56  E-value=2e-14  Score=107.06  Aligned_cols=110  Identities=24%  Similarity=0.410  Sum_probs=92.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+..|+.+++.++||||+++++.+..++..++++|+++++++..++... +.++......+..+++.++.++|..
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~  125 (266)
T cd05033          46 DKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM  125 (266)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            334556777999999999999999999999999999999999999998876543 4578888888899999999887742


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       126 ---------------------------------~i~H~di~p~nili~~~----------~~~~l~dfg~~~~~  156 (266)
T cd05033         126 ---------------------------------NYVHRDLAARNILVNSN----------LVCKVSDFGLSRRL  156 (266)
T ss_pred             ---------------------------------CcccCCCCcceEEEcCC----------CCEEECccchhhcc
Confidence                                             58999999999999854          37899999998754

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.56  E-value=1.6e-14  Score=107.65  Aligned_cols=107  Identities=30%  Similarity=0.491  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .+..+.+|+++++.++||||+++++++.+.  ...++++|+++++++..++...+.+++.....+..+++.++.++|.. 
T Consensus        47 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~-  125 (265)
T cd06652          47 EVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN-  125 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            456788899999999999999999988763  56889999999999988776666677777888889999999887743 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++|+|++|+||+++.+          ..++++|||+++.
T Consensus       126 --------------------------------~i~H~dl~p~nil~~~~----------~~~~l~Dfg~~~~  155 (265)
T cd06652         126 --------------------------------MIVHRDIKGANILRDSV----------GNVKLGDFGASKR  155 (265)
T ss_pred             --------------------------------CEecCCCCHHHEEecCC----------CCEEECcCccccc
Confidence                                            58999999999999743          3789999998864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.56  E-value=2.4e-14  Score=106.94  Aligned_cols=106  Identities=29%  Similarity=0.550  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      +..+..|+.+++.++|||++++++++.+++..++++|+++++++..++...+.+++.....+..+++.++.++|..    
T Consensus        52 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~----  127 (272)
T cd06629          52 VKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK----  127 (272)
T ss_pred             HHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC----
Confidence            4466788999999999999999999999999999999999999988877667788888888889999999887642    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       128 -----------------------------~i~H~dl~~~nil~~~~----------~~~~l~d~~~~~~  157 (272)
T cd06629         128 -----------------------------GILHRDLKADNLLVDAD----------GICKISDFGISKK  157 (272)
T ss_pred             -----------------------------CeeecCCChhhEEEcCC----------CeEEEeecccccc
Confidence                                         57999999999999744          3789999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.56  E-value=1.8e-14  Score=106.90  Aligned_cols=107  Identities=26%  Similarity=0.383  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+..|+.+++.+.||||+++++.+. ....++++|+++++++..++...+.+++.....+..+++.++.++|..   
T Consensus        39 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---  114 (257)
T cd05116          39 LKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET---  114 (257)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            4556788899999999999999998875 456799999999999988876666788888889999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|+||.|++++.+          ..++++|||+++.+
T Consensus       115 ------------------------------~i~H~dlkp~nill~~~----------~~~kl~Dfg~~~~~  145 (257)
T cd05116         115 ------------------------------NFVHRDLAARNVLLVTQ----------HYAKISDFGLSKAL  145 (257)
T ss_pred             ------------------------------CEeecccchhhEEEcCC----------CeEEECCCcccccc
Confidence                                          58999999999999743          37899999998654

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.55  E-value=1.5e-14  Score=110.71  Aligned_cols=108  Identities=24%  Similarity=0.374  Sum_probs=88.9

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+..|+.+++.++||||+++++.+.. ...+++++++++|++.+++... ..++......+..+++.++.++|.. 
T Consensus        51 ~~~~~~~~e~~~l~~l~h~niv~~~g~~~~-~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~-  128 (316)
T cd05108          51 KANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER-  128 (316)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEcC-CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc-
Confidence            345567788999999999999999998865 4578999999999998876653 3467777788888999999988753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|||+||+|++++.+          ..++|+|||+++.+
T Consensus       129 --------------------------------~iiH~dlkp~Nill~~~----------~~~kl~DfG~a~~~  159 (316)
T cd05108         129 --------------------------------RLVHRDLAARNVLVKTP----------QHVKITDFGLAKLL  159 (316)
T ss_pred             --------------------------------CeeccccchhheEecCC----------CcEEEccccccccc
Confidence                                            68999999999999754          36899999999754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.55  E-value=1.9e-14  Score=108.65  Aligned_cols=106  Identities=29%  Similarity=0.436  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+.+|+.+++.++|++++.+.+.+.+.+..|+++||++++++..++...  ..+++.....++.+++.++.++|..   
T Consensus        45 ~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---  121 (285)
T cd05630          45 SMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---  121 (285)
T ss_pred             HHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            44567999999999999999999999999999999999999997765432  2477888888889999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|+||+|++++.+          ..++++|||++...
T Consensus       122 ------------------------------~iiH~dikp~Nil~~~~----------~~~~l~Dfg~~~~~  152 (285)
T cd05630         122 ------------------------------RIVYRDLKPENILLDDH----------GHIRISDLGLAVHV  152 (285)
T ss_pred             ------------------------------CEEeCCCCHHHEEECCC----------CCEEEeeccceeec
Confidence                                          68999999999999743          36899999988643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.55  E-value=1.5e-14  Score=109.73  Aligned_cols=105  Identities=30%  Similarity=0.536  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----------------cCCCHHHHHHHH
Q psy11428          9 IVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----------------GTLSEDTIRIFL   71 (160)
Q Consensus         9 ~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----------------~~~~~~~~~~~~   71 (160)
                      ...+.+|++++.++ +||||+++++++...+..|+++||++++++.+++...                +.++......+.
T Consensus        46 ~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  125 (297)
T cd05089          46 HRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFA  125 (297)
T ss_pred             HHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHH
Confidence            34577899999888 7999999999999999999999999999987766432                235677788888


Q ss_pred             HHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEee
Q psy11428         72 KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIAD  151 (160)
Q Consensus        72 ~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~d  151 (160)
                      .+++.++.++|..                                 +++|+|+||+|++++.+          ..++++|
T Consensus       126 ~qi~~al~~lH~~---------------------------------~ivH~dlkp~Nill~~~----------~~~kl~d  162 (297)
T cd05089         126 SDVATGMQYLSEK---------------------------------QFIHRDLAARNVLVGEN----------LASKIAD  162 (297)
T ss_pred             HHHHHHHHHHHHC---------------------------------CcccCcCCcceEEECCC----------CeEEECC
Confidence            9999999888752                                 68999999999999743          3789999


Q ss_pred             eeccc
Q psy11428        152 FGFAR  156 (160)
Q Consensus       152 fg~a~  156 (160)
                      ||+++
T Consensus       163 fg~~~  167 (297)
T cd05089         163 FGLSR  167 (297)
T ss_pred             cCCCc
Confidence            99875

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.55  E-value=1.6e-14  Score=106.66  Aligned_cols=110  Identities=31%  Similarity=0.574  Sum_probs=94.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+..|+.+++.++|||++++++.+......++++||++++++..++...+.+++.....+..+++.++.++|.. 
T Consensus        43 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-  121 (258)
T cd06632          43 QEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR-  121 (258)
T ss_pred             hHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3456778899999999999999999999999999999999999999988776666678888888889999999887753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+|++++.+          ..++++|||+++..
T Consensus       122 --------------------------------~i~H~dl~~~ni~~~~~----------~~~kl~d~~~~~~~  152 (258)
T cd06632         122 --------------------------------NTVHRDIKGANILVDTN----------GVVKLADFGMAKQV  152 (258)
T ss_pred             --------------------------------CcccCCCCHHHEEECCC----------CCEEEccCccceec
Confidence                                            68999999999999754          37899999988643

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.55  E-value=2.9e-14  Score=105.53  Aligned_cols=110  Identities=36%  Similarity=0.626  Sum_probs=91.9

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ........+|+.+++.++|||++++++++.+++..|+++||++++++..++..  ...+++.....+..+++.++.++|.
T Consensus        39 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~  118 (255)
T cd08219          39 SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHE  118 (255)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            44566778899999999999999999999999999999999999998776543  2346778888888999999988764


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|++|.|++++.+          ..++++|||.++.+
T Consensus       119 ~---------------------------------~i~H~dl~p~nili~~~----------~~~~l~dfg~~~~~  150 (255)
T cd08219         119 K---------------------------------RVLHRDIKSKNIFLTQN----------GKVKLGDFGSARLL  150 (255)
T ss_pred             C---------------------------------CcccCCCCcceEEECCC----------CcEEEcccCcceee
Confidence            2                                 58999999999999744          37899999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.55  E-value=2.1e-14  Score=106.61  Aligned_cols=108  Identities=31%  Similarity=0.517  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....+..|+.+++.++|||++++++++...+..++++|+++++++..++...  ...+......+..+++.++.++|.. 
T Consensus        44 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~-  122 (261)
T cd05072          44 SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK-  122 (261)
T ss_pred             hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3457788999999999999999999999999999999999999998776432  3456777777888999999887642 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+|++++.+          ..++++|||+++..
T Consensus       123 --------------------------------~i~H~dl~p~nili~~~----------~~~~l~dfg~~~~~  153 (261)
T cd05072         123 --------------------------------NYIHRDLRAANVLVSES----------LMCKIADFGLARVI  153 (261)
T ss_pred             --------------------------------CeeccccchhhEEecCC----------CcEEECCCccceec
Confidence                                            57999999999999844          37899999998754

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.55  E-value=2.4e-14  Score=106.05  Aligned_cols=108  Identities=30%  Similarity=0.469  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....+..|+.+++.++|||++++++.+.+....++++|+++++++..++....  .+++.....+..+++.++.++|.. 
T Consensus        43 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~-  121 (256)
T cd05039          43 AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK-  121 (256)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            35667889999999999999999999998999999999999999988765443  578888889999999999987743 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|.|++++.+          +.++++|||.++..
T Consensus       122 --------------------------------~i~H~di~p~Nili~~~----------~~~~l~d~g~~~~~  152 (256)
T cd05039         122 --------------------------------NFVHRDLAARNVLVSED----------LVAKVSDFGLAKEA  152 (256)
T ss_pred             --------------------------------CccchhcccceEEEeCC----------CCEEEccccccccc
Confidence                                            68999999999999854          37899999988643

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.55  E-value=1.3e-14  Score=110.68  Aligned_cols=104  Identities=36%  Similarity=0.595  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+++++.++||||+++++++..++..++++||+++ ++..++... ..++...+..+..+++.++.++|..    
T Consensus        49 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~----  123 (309)
T cd07872          49 CTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR----  123 (309)
T ss_pred             hhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            3466799999999999999999999999999999999975 565554333 3467788888889999999988742    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   +++|||+||+||+++.+          ..++|+|||+++.
T Consensus       124 -----------------------------~ivH~dlkp~Nill~~~----------~~~kl~Dfg~~~~  153 (309)
T cd07872         124 -----------------------------KVLHRDLKPQNLLINER----------GELKLADFGLARA  153 (309)
T ss_pred             -----------------------------CeecCCCCHHHEEECCC----------CCEEECcccccee
Confidence                                         68999999999999744          3789999999864

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.55  E-value=2.4e-14  Score=107.44  Aligned_cols=106  Identities=30%  Similarity=0.536  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ..+.+|+.+++.++|||++++++++......++++||++++.+.........+++.....++.+++.++.++|..     
T Consensus        45 ~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~-----  119 (286)
T cd07847          45 KIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH-----  119 (286)
T ss_pred             HHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            346789999999999999999999999999999999999988776655555688888999999999999987752     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++|+|++|+|++++.+          +.++++|||++..+
T Consensus       120 ----------------------------~i~H~dl~p~nil~~~~----------~~~~l~dfg~~~~~  150 (286)
T cd07847         120 ----------------------------NCIHRDVKPENILITKQ----------GQIKLCDFGFARIL  150 (286)
T ss_pred             ----------------------------CceecCCChhhEEEcCC----------CcEEECccccceec
Confidence                                        68999999999999754          37899999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.55  E-value=2.7e-14  Score=107.13  Aligned_cols=111  Identities=23%  Similarity=0.369  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-------CCCHHHHHHHHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-------TLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~   80 (160)
                      ....+.+|+.+++.++||||+++++++.+....++++|+++++++..++...+       .+++.....+..+++.++.+
T Consensus        52 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~  131 (277)
T cd05036          52 DESDFLMEALIMSKFNHQNIVRLIGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKY  131 (277)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Confidence            34567889999999999999999999988899999999999999987765432       35677777888999999988


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..                                 +++|+|++|+|++++.++       ....++++|||+++.+
T Consensus       132 LH~~---------------------------------~ivH~dlkp~nil~~~~~-------~~~~~kl~dfg~~~~~  169 (277)
T cd05036         132 LEEN---------------------------------HFIHRDIAARNCLLTCKG-------PGRVAKIADFGMARDI  169 (277)
T ss_pred             HHHC---------------------------------CEeecccchheEEEeccC-------CCcceEeccCcccccc
Confidence            7753                                 589999999999998542       2346899999998643

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.55  E-value=2.9e-14  Score=105.13  Aligned_cols=106  Identities=29%  Similarity=0.476  Sum_probs=88.7

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|+++++.++|||++++++.+...+..++++||++++++..++... ..+.+.....+..+++.++.++|..   
T Consensus        36 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---  112 (250)
T cd05085          36 KIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---  112 (250)
T ss_pred             HHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            345778999999999999999999999999999999999999998776443 3467777788888888888887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       113 ------------------------------~~~H~dl~p~nili~~~----------~~~~l~d~g~~~~  142 (250)
T cd05085         113 ------------------------------NCIHRDLAARNCLVGEN----------NVLKISDFGMSRQ  142 (250)
T ss_pred             ------------------------------CeeecccChheEEEcCC----------CeEEECCCcccee
Confidence                                          68999999999999743          3789999998864

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.54  E-value=2.2e-14  Score=109.02  Aligned_cols=109  Identities=24%  Similarity=0.483  Sum_probs=89.3

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----------------cCCCHHHHHH
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----------------GTLSEDTIRI   69 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----------------~~~~~~~~~~   69 (160)
                      .....+..|+.+++.+ +||||+++++.+......|+++||++++++..++...                ..++......
T Consensus        62 ~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (304)
T cd05101          62 KDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVS  141 (304)
T ss_pred             HHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHH
Confidence            4455677899999999 8999999999999999999999999999988776432                1245566777


Q ss_pred             HHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEE
Q psy11428         70 FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKI  149 (160)
Q Consensus        70 ~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l  149 (160)
                      +..+++.++.++|..                                 +++|+|+||+|++++.+          ..+++
T Consensus       142 ~~~qi~~al~~LH~~---------------------------------givH~dlkp~Nili~~~----------~~~kl  178 (304)
T cd05101         142 CTYQVARGMEYLASQ---------------------------------KCIHRDLAARNVLVTEN----------NVMKI  178 (304)
T ss_pred             HHHHHHHHHHHHHHC---------------------------------CeeecccccceEEEcCC----------CcEEE
Confidence            888999999887753                                 68999999999999743          37899


Q ss_pred             eeeeccccc
Q psy11428        150 ADFGFARFL  158 (160)
Q Consensus       150 ~dfg~a~~~  158 (160)
                      +|||+++..
T Consensus       179 ~D~g~~~~~  187 (304)
T cd05101         179 ADFGLARDV  187 (304)
T ss_pred             CCCccceec
Confidence            999998643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG0604|consensus

Probab=99.54  E-value=5.8e-15  Score=110.41  Aligned_cols=105  Identities=30%  Similarity=0.514  Sum_probs=86.7

Q ss_pred             HHHHHHHHhhc-CCcceEEEeeeee----cCCcEEEEEEEeCCCceeEEEeeecC--CCHHHHHHHHHHHHHHHHHhhhh
Q psy11428         12 TRHILKELTEL-HHENVVELLHCKE----SDQHVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus        12 ~~~~~~~l~~l-~h~~iv~l~~~~~----~~~~~~lv~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      +++|++.-... .|||||+.+++|+    ...-+.+|||.+.||.|...+..++.  +.+.....++.++..+++++|..
T Consensus       101 ARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~  180 (400)
T KOG0604|consen  101 ARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM  180 (400)
T ss_pred             HHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc
Confidence            56777764433 6999999988664    44456788999999999988877765  88999999999999999998753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                       .|.|||+||+|+|.+.+.       .+..+||+|||+|+
T Consensus       181 ---------------------------------nIAHRDlKpENLLyt~t~-------~na~lKLtDfGFAK  212 (400)
T KOG0604|consen  181 ---------------------------------NIAHRDLKPENLLYTTTS-------PNAPLKLTDFGFAK  212 (400)
T ss_pred             ---------------------------------chhhccCChhheeeecCC-------CCcceEeccccccc
Confidence                                             579999999999998654       56688999999996

>KOG0666|consensus

Probab=99.54  E-value=6e-15  Score=110.93  Aligned_cols=107  Identities=31%  Similarity=0.513  Sum_probs=86.8

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeec-CCcEEEEEEEeCCCceeEEEe-----eecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428         13 RHILKELTELHHENVVELLHCKES-DQHVYLVMEFCNGGDLADYLV-----SKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~-~~~~~lv~e~~~~g~l~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      -.|++.++.++|||+++|..++.. ...+++++||.+.. |-.-+.     ....++...+.+++-|++.++.++|.+  
T Consensus        75 cREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fdYAEhD-L~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N--  151 (438)
T KOG0666|consen   75 CREIALLRELKHPNVISLVKVFLSHDKKVWLLFDYAEHD-LWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN--  151 (438)
T ss_pred             HHHHHHHHHhcCCcchhHHHHHhccCceEEEEehhhhhh-HHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh--
Confidence            348999999999999999998876 78899999999764 322221     123567888999999999999998764  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                     =++|||+||+||++..++      +.++.+||+|+|++|.+.
T Consensus       152 -------------------------------WvlHRDLKPaNIlvmgdg------perG~VKIaDlGlaR~~~  187 (438)
T KOG0666|consen  152 -------------------------------WVLHRDLKPANILVMGDG------PERGRVKIADLGLARLFN  187 (438)
T ss_pred             -------------------------------heeeccCCcceEEEeccC------CccCeeEeecccHHHHhh
Confidence                                           268999999999998654      567899999999998654

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.54  E-value=3.4e-14  Score=109.28  Aligned_cols=106  Identities=22%  Similarity=0.301  Sum_probs=88.7

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .....++.|+++++.++||||+++++++..++..|+++||++++++.+++..+  ..+++..+..+..+++.++.++|..
T Consensus        41 ~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~  120 (327)
T cd08227          41 EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM  120 (327)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34556778999999999999999999999999999999999999998776432  3478888888999999999988753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA  155 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a  155 (160)
                                                       +++|||+||+|++++.+          ..+++.||+.+
T Consensus       121 ---------------------------------~iiH~dlkp~Nil~~~~----------~~~~l~~~~~~  148 (327)
T cd08227         121 ---------------------------------GYVHRSVKASHILISVD----------GKVYLSGLRSN  148 (327)
T ss_pred             ---------------------------------CEecCCCChhhEEEecC----------CcEEEcccchh
Confidence                                             58999999999999854          36788888653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.54  E-value=2.3e-14  Score=109.18  Aligned_cols=109  Identities=27%  Similarity=0.495  Sum_probs=89.8

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----------------cCCCHHHHHH
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----------------GTLSEDTIRI   69 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----------------~~~~~~~~~~   69 (160)
                      .....+..|+++++.+ +||||+++++++..++..|+++||+++++|..++..+                ..++......
T Consensus        65 ~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  144 (307)
T cd05098          65 KDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVS  144 (307)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHH
Confidence            3455677789999999 7999999999999999999999999999988776543                2356677788


Q ss_pred             HHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEE
Q psy11428         70 FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKI  149 (160)
Q Consensus        70 ~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l  149 (160)
                      +..+++.++.++|..                                 +++|+|+||+|++++.+          ..+++
T Consensus       145 ~~~qi~~aL~~lH~~---------------------------------gi~H~dlkp~Nill~~~----------~~~kL  181 (307)
T cd05098         145 CAYQVARGMEYLASK---------------------------------KCIHRDLAARNVLVTED----------NVMKI  181 (307)
T ss_pred             HHHHHHHHHHHHHHC---------------------------------CcccccccHHheEEcCC----------CcEEE
Confidence            889999999887742                                 68999999999999744          37899


Q ss_pred             eeeeccccc
Q psy11428        150 ADFGFARFL  158 (160)
Q Consensus       150 ~dfg~a~~~  158 (160)
                      +|||+++..
T Consensus       182 ~dfg~a~~~  190 (307)
T cd05098         182 ADFGLARDI  190 (307)
T ss_pred             CCCcccccc
Confidence            999998643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.54  E-value=2.7e-14  Score=106.28  Aligned_cols=109  Identities=27%  Similarity=0.525  Sum_probs=90.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe----eecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      .....+.+|+++++.++|||++++++.+.+++..++++|+++++++...+.    ....+++.....+..+++.++.++|
T Consensus        44 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH  123 (267)
T cd08228          44 KARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH  123 (267)
T ss_pred             HHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh
Confidence            344567789999999999999999999999999999999999998876542    2234677788888899999998876


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       124 ~~---------------------------------~i~H~dl~~~nil~~~~----------~~~~l~d~g~~~~~  156 (267)
T cd08228         124 SR---------------------------------RVMHRDIKPANVFITAT----------GVVKLGDLGLGRFF  156 (267)
T ss_pred             hC---------------------------------CeeCCCCCHHHEEEcCC----------CCEEECccccceec
Confidence            42                                 58999999999999754          36899999988654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.54  E-value=2.9e-14  Score=106.39  Aligned_cols=114  Identities=22%  Similarity=0.192  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+..++.+++.++||||+++++++......++++||++++.+..++..+ +.+++.....+..+++.++.++|..  
T Consensus        47 ~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--  124 (262)
T cd05077          47 ISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK--  124 (262)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC--
Confidence            3446677888999999999999999999999999999999999887665433 4578888888999999999887742  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++|||+||+|++++.++..   ......++++|||++..
T Consensus       125 -------------------------------~ivH~dlkp~Nill~~~~~~---~~~~~~~~l~d~g~~~~  161 (262)
T cd05077         125 -------------------------------DLVHGNVCTKNILLAREGID---GECGPFIKLSDPGIPIT  161 (262)
T ss_pred             -------------------------------CeECCCCCcccEEEecCCcc---CCCCceeEeCCCCCCcc
Confidence                                           68999999999999754310   11223479999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.54  E-value=2.7e-14  Score=110.13  Aligned_cols=110  Identities=25%  Similarity=0.478  Sum_probs=89.6

Q ss_pred             hhHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----------------CCCHHHHH
Q psy11428          6 KSSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------------TLSEDTIR   68 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~~   68 (160)
                      ......+..|+++++.+ +||||+++++.+..++..++++||+++++|..++....                .++.....
T Consensus        58 ~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  137 (334)
T cd05100          58 DKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLV  137 (334)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHH
Confidence            34456778899999999 79999999999999999999999999999887764321                24556667


Q ss_pred             HHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEE
Q psy11428         69 IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLK  148 (160)
Q Consensus        69 ~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~  148 (160)
                      .+..+++.++.++|..                                 +++|+|+||+|++++.+          ..++
T Consensus       138 ~~~~qi~~al~~LH~~---------------------------------givH~dlkp~Nill~~~----------~~~k  174 (334)
T cd05100         138 SCAYQVARGMEYLASQ---------------------------------KCIHRDLAARNVLVTED----------NVMK  174 (334)
T ss_pred             HHHHHHHHHHHHHHHC---------------------------------CeeccccccceEEEcCC----------CcEE
Confidence            7888999999887752                                 68999999999999744          3789


Q ss_pred             Eeeeeccccc
Q psy11428        149 IADFGFARFL  158 (160)
Q Consensus       149 l~dfg~a~~~  158 (160)
                      |+|||+++..
T Consensus       175 L~Dfg~~~~~  184 (334)
T cd05100         175 IADFGLARDV  184 (334)
T ss_pred             ECCcccceec
Confidence            9999998743

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.54  E-value=3.6e-14  Score=107.24  Aligned_cols=109  Identities=28%  Similarity=0.503  Sum_probs=91.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+..|+..++.++|||++++.+++..++..|+++||++++++...+.. .+.+++.....+..+++.++.++|..
T Consensus        50 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~  129 (292)
T cd06644          50 EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM  129 (292)
T ss_pred             HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            34566788899999999999999999999999999999999999988665432 34578888888999999999887642


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                       +++|+|++|+|++++.+          +.++|+|||++..
T Consensus       130 ---------------------------------~i~H~dlkp~Nili~~~----------~~~kl~dfg~~~~  159 (292)
T cd06644         130 ---------------------------------KIIHRDLKAGNVLLTLD----------GDIKLADFGVSAK  159 (292)
T ss_pred             ---------------------------------CeeecCCCcceEEEcCC----------CCEEEccCcccee
Confidence                                             58999999999999743          3789999998753

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.54  E-value=2.6e-14  Score=107.87  Aligned_cols=105  Identities=28%  Similarity=0.402  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+.+|+++++.++|+|++.+.+.+..++..|+++||++++++...+...  ..+++.....+..+++.++.++|..   
T Consensus        45 ~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---  121 (285)
T cd05632          45 SMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---  121 (285)
T ss_pred             HHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            34567999999999999999999999999999999999999987655432  3578888888999999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|||++|+|++++.+          ..++++|||+++.
T Consensus       122 ------------------------------~iiH~dikp~Nili~~~----------~~~kl~Dfg~~~~  151 (285)
T cd05632         122 ------------------------------NTVYRDLKPENILLDDY----------GHIRISDLGLAVK  151 (285)
T ss_pred             ------------------------------CeeecCCCHHHEEECCC----------CCEEEecCCccee
Confidence                                          68999999999999744          3789999998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.54  E-value=1.8e-14  Score=108.11  Aligned_cols=107  Identities=32%  Similarity=0.457  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ...+..|+++++.++|||++++.+++...+..|+++||++++++..++...+  .+++.....+..+++.++.++|..  
T Consensus        37 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~--  114 (277)
T cd05577          37 EQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR--  114 (277)
T ss_pred             hHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            3345678999999999999999999999999999999999999987765544  578888888899999999887742  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+||+++.+          ..++++|||+++..
T Consensus       115 -------------------------------~i~H~di~p~Nil~~~~----------~~~~l~dfg~~~~~  145 (277)
T cd05577         115 -------------------------------RIVYRDLKPENVLLDDH----------GNVRISDLGLAVEL  145 (277)
T ss_pred             -------------------------------CcccCCCCHHHEEECCC----------CCEEEccCcchhhh
Confidence                                           58999999999999744          37899999988643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.54  E-value=3.7e-14  Score=105.17  Aligned_cols=107  Identities=27%  Similarity=0.425  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+.+++.+.|||++++++.+. ....++++++++++++.+++...+.+++.....+..+++.++.++|..   
T Consensus        39 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~---  114 (257)
T cd05060          39 GKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK---  114 (257)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc---
Confidence            4456778999999999999999999775 456899999999999998887666788889999999999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++..
T Consensus       115 ------------------------------~i~H~di~p~nili~~~----------~~~kl~df~~~~~~  145 (257)
T cd05060         115 ------------------------------HFVHRDLAARNVLLVNR----------HQAKISDFGMSRAL  145 (257)
T ss_pred             ------------------------------CeeccCcccceEEEcCC----------CcEEecccccccee
Confidence                                          58999999999999854          37899999998643

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.54  E-value=3.5e-14  Score=112.55  Aligned_cols=50  Identities=34%  Similarity=0.538  Sum_probs=44.0

Q ss_pred             HHHHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe
Q psy11428          8 SIVLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLV   57 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~   57 (160)
                      ....+..|++++..+. ||||+++++++..++.+++++||+++|+|.+++.
T Consensus        83 ~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E~~~~g~L~~~l~  133 (401)
T cd05107          83 EKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITEYCRYGDLVDYLH  133 (401)
T ss_pred             HHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEeccCCCcHHHHHH
Confidence            3456788999999997 9999999999999999999999999999876653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.54  E-value=3.4e-14  Score=105.84  Aligned_cols=109  Identities=23%  Similarity=0.390  Sum_probs=88.5

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCc------EEEEEEEeCCCceeEEEeee------cCCCHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQH------VYLVMEFCNGGDLADYLVSK------GTLSEDTIRIFLKQ   73 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~------~~lv~e~~~~g~l~~~l~~~------~~~~~~~~~~~~~~   73 (160)
                      ...+..+.+|++.++.++|||++++++.+.....      .++++||++++++..++...      ..+++.....+..+
T Consensus        42 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  121 (273)
T cd05035          42 YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVD  121 (273)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHH
Confidence            3456778899999999999999999987755443      79999999999987655321      24677888888999


Q ss_pred             HHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeee
Q psy11428         74 IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG  153 (160)
Q Consensus        74 ~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg  153 (160)
                      ++.++.++|..                                 +++|+|+||+|++++++          ..++++|||
T Consensus       122 i~~aL~~lH~~---------------------------------~i~H~dlkp~Nil~~~~----------~~~kl~dfg  158 (273)
T cd05035         122 IALGMEYLSNR---------------------------------NFIHRDLAARNCMLRED----------MTVCVADFG  158 (273)
T ss_pred             HHHHHHHHHhC---------------------------------CeeccccchheEEECCC----------CeEEECCcc
Confidence            99999887742                                 58999999999999743          378999999


Q ss_pred             cccc
Q psy11428        154 FARF  157 (160)
Q Consensus       154 ~a~~  157 (160)
                      +++.
T Consensus       159 ~~~~  162 (273)
T cd05035         159 LSKK  162 (273)
T ss_pred             ceee
Confidence            9874

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.54  E-value=2.7e-14  Score=106.50  Aligned_cols=108  Identities=30%  Similarity=0.536  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeec--CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~--~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .+..+..|+.+++.++||||+++++++..  +...++++|+++++++..++...+.+++.....+..+++.++.++|.. 
T Consensus        47 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~-  125 (266)
T cd06651          47 EVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN-  125 (266)
T ss_pred             HHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            45678889999999999999999998765  467899999999999988776666678888888899999999887642 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+|++++.+          ..++|+|||+++.+
T Consensus       126 --------------------------------~i~H~~l~p~nil~~~~----------~~~~l~dfg~~~~~  156 (266)
T cd06651         126 --------------------------------MIVHRDIKGANILRDSA----------GNVKLGDFGASKRL  156 (266)
T ss_pred             --------------------------------CeeeCCCCHHHEEECCC----------CCEEEccCCCcccc
Confidence                                            58999999999999754          36899999998643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.54  E-value=3.7e-14  Score=105.71  Aligned_cols=107  Identities=25%  Similarity=0.405  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|+++++.++|||++++.+++...+..++++|+++++++..++..+ +.++......+..+++.++.++|..   
T Consensus        50 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---  126 (268)
T cd05063          50 RQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---  126 (268)
T ss_pred             HHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            345677899999999999999999999999999999999999998776543 4567788888889999999887753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|+||+|++++.+          ..++++|||+++..
T Consensus       127 ------------------------------~i~H~dlkp~Nili~~~----------~~~kl~dfg~~~~~  157 (268)
T cd05063         127 ------------------------------NYVHRDLAARNILVNSN----------LECKVSDFGLSRVL  157 (268)
T ss_pred             ------------------------------CeeccccchhhEEEcCC----------CcEEECCCccceec
Confidence                                          58999999999999743          37899999998644

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.54  E-value=7.6e-15  Score=108.61  Aligned_cols=108  Identities=37%  Similarity=0.608  Sum_probs=93.9

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      +....+.+|+++++.++|||++++++++..+...|+++|+++++++..++...+.+++.....+..++++++.++|..  
T Consensus        35 ~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~--  112 (265)
T cd05579          35 NQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSN--  112 (265)
T ss_pred             hHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc--
Confidence            456778889999999999999999999999999999999999999988776666788888889999999999987742  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++|+|++|+|++++.+          ..++++|||++..
T Consensus       113 -------------------------------~i~H~di~~~nil~~~~----------~~~~l~dfg~~~~  142 (265)
T cd05579         113 -------------------------------GIIHRDLKPDNILIDSN----------GHLKLTDFGLSKV  142 (265)
T ss_pred             -------------------------------CeecCCCCHHHeEEcCC----------CCEEEEecccchh
Confidence                                           68999999999999854          3789999998753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.54  E-value=2.9e-14  Score=106.63  Aligned_cols=108  Identities=27%  Similarity=0.422  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----------CCCHHHHHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------TLSEDTIRIFLKQIVQA   77 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----------~~~~~~~~~~~~~~~~~   77 (160)
                      ....+..|+.+++.++|||++++++++......++++|++++++|..++....          .+++.....+..+++.+
T Consensus        52 ~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  131 (277)
T cd05032          52 ERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADG  131 (277)
T ss_pred             HHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHH
Confidence            34567788999999999999999999999999999999999999987764322          24556677788899999


Q ss_pred             HHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         78 LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        78 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +.++|..                                 +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       132 l~~lH~~---------------------------------~i~H~di~p~nill~~~----------~~~kl~dfg~~~~  168 (277)
T cd05032         132 MAYLAAK---------------------------------KFVHRDLAARNCMVAED----------LTVKIGDFGMTRD  168 (277)
T ss_pred             HHHHHhC---------------------------------CccccccChheEEEcCC----------CCEEECCcccchh
Confidence            9887742                                 58999999999999854          3789999999864


Q ss_pred             c
Q psy11428        158 L  158 (160)
Q Consensus       158 ~  158 (160)
                      +
T Consensus       169 ~  169 (277)
T cd05032         169 I  169 (277)
T ss_pred             h
Confidence            3

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.54  E-value=3.7e-14  Score=105.23  Aligned_cols=108  Identities=25%  Similarity=0.445  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....+..|+.+++.++|||++++++.+.+....++++||++++++.+++...  ..++......+..+++.++.++|.. 
T Consensus        45 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~-  123 (261)
T cd05148          45 KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ-  123 (261)
T ss_pred             hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3456788999999999999999999999999999999999999998887643  3467778888889999999988753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+|++++.+          ..++++|||++...
T Consensus       124 --------------------------------~i~h~dl~~~nilv~~~----------~~~kl~d~g~~~~~  154 (261)
T cd05148         124 --------------------------------NSIHRDLAARNILVGED----------LVCKVADFGLARLI  154 (261)
T ss_pred             --------------------------------CeeccccCcceEEEcCC----------ceEEEccccchhhc
Confidence                                            58999999999999844          37899999998643

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.53  E-value=3e-14  Score=106.70  Aligned_cols=107  Identities=28%  Similarity=0.417  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--------------cCCCHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--------------GTLSEDTIRIFLKQ   73 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--------------~~~~~~~~~~~~~~   73 (160)
                      ....+.+|+++++.++|||++++++.+......++++||++++++..++...              ..+++.....+..+
T Consensus        51 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  130 (280)
T cd05049          51 ARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQ  130 (280)
T ss_pred             HHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHH
Confidence            4567888999999999999999999999999999999999999988776432              23566777888899


Q ss_pred             HHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeee
Q psy11428         74 IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG  153 (160)
Q Consensus        74 ~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg  153 (160)
                      ++.++.++|..                                 +++|+|++|+|++++.+          ..++++|||
T Consensus       131 i~~~l~~lH~~---------------------------------~i~h~dlkp~nili~~~----------~~~kl~d~g  167 (280)
T cd05049         131 IASGMVYLASQ---------------------------------HFVHRDLATRNCLVGYD----------LVVKIGDFG  167 (280)
T ss_pred             HHHHHHHHhhC---------------------------------CeeccccccceEEEcCC----------CeEEECCcc
Confidence            99999887642                                 58999999999999854          478999999


Q ss_pred             cccc
Q psy11428        154 FARF  157 (160)
Q Consensus       154 ~a~~  157 (160)
                      +++.
T Consensus       168 ~~~~  171 (280)
T cd05049         168 MSRD  171 (280)
T ss_pred             ccee
Confidence            8864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.53  E-value=1.5e-14  Score=108.85  Aligned_cols=111  Identities=26%  Similarity=0.414  Sum_probs=92.2

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee---cCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK---GTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ++....+.+|+.+++.++||||+++++++..++..++++||++++++..++...   +.+++.....+..+++.++.++|
T Consensus        40 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH  119 (286)
T cd06622          40 ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK  119 (286)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            344567788999999999999999999999999999999999999987665432   36788888999999999998876


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                .+++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       120 ~~--------------------------------~~i~H~dl~p~nil~~~~----------~~~~l~dfg~~~~~  153 (286)
T cd06622         120 EE--------------------------------HNIIHRDVKPTNVLVNGN----------GQVKLCDFGVSGNL  153 (286)
T ss_pred             hc--------------------------------CCEeeCCCCHHHEEECCC----------CCEEEeecCCcccc
Confidence            31                                158999999999999853          37899999988643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.53  E-value=4.9e-14  Score=105.44  Aligned_cols=109  Identities=27%  Similarity=0.464  Sum_probs=93.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+.+|+++++.++|||++++.+++.++...|+++|+++++++..++... .+++.....+..+++.++.++|.. 
T Consensus        40 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~-  117 (274)
T cd06609          40 EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEE-  117 (274)
T ss_pred             chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            345566788999999999999999999999999999999999999998876543 678888999999999999887642 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       118 --------------------------------~i~h~dl~p~ni~i~~~----------~~~~l~d~g~~~~~  148 (274)
T cd06609         118 --------------------------------GKIHRDIKAANILLSEE----------GDVKLADFGVSGQL  148 (274)
T ss_pred             --------------------------------CcccCCCCHHHEEECCC----------CCEEEcccccceee
Confidence                                            57999999999999854          37899999998654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.53  E-value=2.4e-14  Score=108.00  Aligned_cols=106  Identities=27%  Similarity=0.446  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+..|+++++.+ +||+|+++.+++..+...|+++|+++++++.+++.....+++.....+..+++.++.++|..    
T Consensus        49 ~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~----  124 (290)
T cd05613          49 EHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL----  124 (290)
T ss_pred             HHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            4567788999999 59999999999999999999999999999988877667788888888888999999887642    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|+|++|+||+++.+          ..++++|||+++.+
T Consensus       125 -----------------------------~i~H~dl~p~nil~~~~----------~~~kl~dfg~~~~~  155 (290)
T cd05613         125 -----------------------------GIIYRDIKLENILLDSN----------GHVVLTDFGLSKEF  155 (290)
T ss_pred             -----------------------------CeeccCCCHHHeEECCC----------CCEEEeeCccceec
Confidence                                         68999999999999743          37899999988643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.53  E-value=1.1e-13  Score=105.62  Aligned_cols=109  Identities=32%  Similarity=0.524  Sum_probs=83.6

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeee--cCCcEEEEEEEeCCCceeEEEe---------eecCCCHHHHHHHHHHHHHHH
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKE--SDQHVYLVMEFCNGGDLADYLV---------SKGTLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~--~~~~~~lv~e~~~~g~l~~~l~---------~~~~~~~~~~~~~~~~~~~~~   78 (160)
                      ..+.+|+++++.++||||+++++++.  .+...++++||+++ ++..++.         ....+++..+..++.+++.++
T Consensus        43 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL  121 (317)
T cd07867          43 MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGI  121 (317)
T ss_pred             HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHH
Confidence            35678999999999999999999874  45678999999876 4332221         112467778888999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .++|..                                 +++|||+||+||++..+.      +.++.++|+|||+++.+
T Consensus       122 ~~lH~~---------------------------------~ivH~Dlkp~Nil~~~~~------~~~~~~kl~DfG~a~~~  162 (317)
T cd07867         122 HYLHAN---------------------------------WVLHRDLKPANILVMGEG------PERGRVKIADMGFARLF  162 (317)
T ss_pred             HHHHhC---------------------------------CEEcCCCCHHHEEEccCC------CCCCcEEEeeccceecc
Confidence            988752                                 689999999999995321      24457999999999754

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.53  E-value=1e-14  Score=108.13  Aligned_cols=109  Identities=34%  Similarity=0.517  Sum_probs=95.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+..+..|++.++.++||||+++++++..+...|+++|++.++++..++.....+++.....+..++++++.++|..  
T Consensus        42 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~--  119 (258)
T cd05578          42 GSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK--  119 (258)
T ss_pred             hHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC--
Confidence            567788899999999999999999999999999999999999999988776666788888999999999999987742  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+|++++.+          ..++++|||++...
T Consensus       120 -------------------------------~i~h~dl~~~nil~~~~----------~~~~l~d~~~~~~~  150 (258)
T cd05578         120 -------------------------------GIIHRDIKPDNILLDEQ----------GHVHITDFNIATKV  150 (258)
T ss_pred             -------------------------------CeeccCCCHHHeEEcCC----------CCEEEeeccccccc
Confidence                                           57999999999999754          37899999987643

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.53  E-value=4.4e-14  Score=105.41  Aligned_cols=111  Identities=23%  Similarity=0.402  Sum_probs=87.2

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeec------CCcEEEEEEEeCCCceeEEEee------ecCCCHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKES------DQHVYLVMEFCNGGDLADYLVS------KGTLSEDTIRIFLK   72 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~------~~~~~lv~e~~~~g~l~~~l~~------~~~~~~~~~~~~~~   72 (160)
                      +......+..|+++++.++||||+++++.+..      ....+++++|++++++..++..      ...+++.....+..
T Consensus        40 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (272)
T cd05075          40 TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMT  119 (272)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHH
Confidence            34556778889999999999999999986532      1356899999999988665421      12367788888899


Q ss_pred             HHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeee
Q psy11428         73 QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADF  152 (160)
Q Consensus        73 ~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~df  152 (160)
                      +++.++.++|..                                 +++|||+||+|++++.+          ..++++||
T Consensus       120 ~i~~~l~~lH~~---------------------------------~i~H~dlkp~Nil~~~~----------~~~kl~Df  156 (272)
T cd05075         120 DIASGMEYLSSK---------------------------------SFIHRDLAARNCMLNEN----------MNVCVADF  156 (272)
T ss_pred             HHHHHHHHHHHC---------------------------------CeeccccchhheEEcCC----------CCEEECCC
Confidence            999999988753                                 58999999999999754          37899999


Q ss_pred             eccccc
Q psy11428        153 GFARFL  158 (160)
Q Consensus       153 g~a~~~  158 (160)
                      |+++..
T Consensus       157 g~~~~~  162 (272)
T cd05075         157 GLSKKI  162 (272)
T ss_pred             Cccccc
Confidence            998753

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.53  E-value=2.7e-14  Score=108.03  Aligned_cols=106  Identities=33%  Similarity=0.524  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|+++++.++||||+++++++.++...++++|++ ++++..++.... .+++..+..++.++++++.++|..   
T Consensus        46 ~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---  121 (298)
T cd07841          46 NFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---  121 (298)
T ss_pred             hHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            345667999999999999999999999999999999999 888888776555 678888888999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+||+++.+          +.++|+|||+++..
T Consensus       122 ------------------------------~i~H~dl~p~nill~~~----------~~~~l~dfg~~~~~  152 (298)
T cd07841         122 ------------------------------WILHRDLKPNNLLIASD----------GVLKLADFGLARSF  152 (298)
T ss_pred             ------------------------------CeeecCCChhhEEEcCC----------CCEEEccceeeeec
Confidence                                          58999999999999854          37899999998654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.52  E-value=2.6e-14  Score=108.97  Aligned_cols=109  Identities=26%  Similarity=0.387  Sum_probs=93.2

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      +...+..++.|+++++.++||||+++++++......++++||++++++..++...  ..+++.....++.+++.++.++|
T Consensus        39 ~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH  118 (314)
T cd08216          39 SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIH  118 (314)
T ss_pred             chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            4567788999999999999999999999999999999999999999987766532  34678888888999999999887


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      ..                                 +++|+|++|+||+++.+          +.++++|||.+.
T Consensus       119 ~~---------------------------------~ivH~dlk~~Nili~~~----------~~~kl~d~~~~~  149 (314)
T cd08216         119 SK---------------------------------GFIHRSVKASHILLSGD----------GKVVLSGLRYSV  149 (314)
T ss_pred             HC---------------------------------CeecCCCCcceEEEecC----------CceEEecCccce
Confidence            53                                 58999999999999854          378999999775

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.52  E-value=6.5e-14  Score=105.14  Aligned_cols=107  Identities=28%  Similarity=0.414  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|+..++.++|||++++++.+.. ...++++|+++++++.+++... ..+++.....+..+++.++.++|..  
T Consensus        52 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--  128 (279)
T cd05057          52 ANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK--  128 (279)
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            45667789999999999999999998876 7899999999999998876543 4578888888999999999988752  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       129 -------------------------------~i~H~di~p~nil~~~~----------~~~kL~dfg~~~~~  159 (279)
T cd05057         129 -------------------------------RLVHRDLAARNVLVKTP----------QHVKITDFGLAKLL  159 (279)
T ss_pred             -------------------------------CEEecccCcceEEEcCC----------CeEEECCCcccccc
Confidence                                           68999999999999743          37899999998754

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.52  E-value=4.2e-14  Score=106.27  Aligned_cols=107  Identities=27%  Similarity=0.468  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee----------------ecCCCHHHHHHHHH
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS----------------KGTLSEDTIRIFLK   72 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~----------------~~~~~~~~~~~~~~   72 (160)
                      ...+.+|..+++.++||||+++++.+.+....++++++++++++..++..                +..++......+..
T Consensus        52 ~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (283)
T cd05091          52 REEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVT  131 (283)
T ss_pred             HHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHH
Confidence            35577888999999999999999999999999999999999887766431                12356677778888


Q ss_pred             HHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeee
Q psy11428         73 QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADF  152 (160)
Q Consensus        73 ~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~df  152 (160)
                      +++.++.++|..                                 +++|||+||.|++++.+          ..++++||
T Consensus       132 ql~~aL~~lH~~---------------------------------gi~H~dlkp~Nil~~~~----------~~~kl~Df  168 (283)
T cd05091         132 QIAAGMEFLSSH---------------------------------HVVHKDLATRNVLVFDK----------LNVKISDL  168 (283)
T ss_pred             HHHHHHHHHHHc---------------------------------CccccccchhheEecCC----------CceEeccc
Confidence            999999888743                                 68999999999999743          36899999


Q ss_pred             eccccc
Q psy11428        153 GFARFL  158 (160)
Q Consensus       153 g~a~~~  158 (160)
                      |+++.+
T Consensus       169 g~~~~~  174 (283)
T cd05091         169 GLFREV  174 (283)
T ss_pred             cccccc
Confidence            987643

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.52  E-value=3.6e-14  Score=107.74  Aligned_cols=106  Identities=28%  Similarity=0.480  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++|||++++.+.+..+...|+++||++++++..++. ...++......+..+++.++.++|..   
T Consensus        60 ~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~ql~~aL~~LH~~---  135 (296)
T cd06654          60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALEFLHSN---  135 (296)
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34667889999999999999999999999999999999999999988763 34567778888889999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       136 ------------------------------gi~H~dLkp~Nill~~~----------~~~kl~dfg~~~~  165 (296)
T cd06654         136 ------------------------------QVIHRDIKSDNILLGMD----------GSVKLTDFGFCAQ  165 (296)
T ss_pred             ------------------------------CcccCCCCHHHEEEcCC----------CCEEECccccchh
Confidence                                          68999999999999754          3789999998764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.52  E-value=5.1e-14  Score=105.03  Aligned_cols=110  Identities=34%  Similarity=0.486  Sum_probs=90.5

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCC--CHHHHHHHHHHHHHHHHHhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTL--SEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~--~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      .....+.+|+++++.++||||+++++++..++..++++|++++++|..++..+ +..  ++.....+..+++.++.++|.
T Consensus        47 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~  126 (268)
T cd06624          47 RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHD  126 (268)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHH
Confidence            34567788999999999999999999999999999999999999998876543 334  666777788899999988764


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|++|+||+++.+         ...++++|||++..+
T Consensus       127 ~---------------------------------~i~h~dl~p~nil~~~~---------~~~~~l~dfg~~~~~  159 (268)
T cd06624         127 N---------------------------------QIVHRDIKGDNVLVNTY---------SGVVKISDFGTSKRL  159 (268)
T ss_pred             C---------------------------------CEeecCCCHHHEEEcCC---------CCeEEEecchhheec
Confidence            2                                 68999999999999742         236899999987643

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.52  E-value=3.7e-14  Score=106.35  Aligned_cols=109  Identities=28%  Similarity=0.476  Sum_probs=92.0

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+..|+.+++.++||||+++++++..+...|+++||++++++..++.. +.+++..+..+..+++.++.++|.. 
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~-  120 (277)
T cd06642          43 EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSE-  120 (277)
T ss_pred             hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcC-
Confidence            34456788899999999999999999999999999999999999999877643 4577888888889999998887632 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       121 --------------------------------~ivH~dl~p~ni~i~~~----------~~~~l~dfg~~~~~  151 (277)
T cd06642         121 --------------------------------RKIHRDIKAANVLLSEQ----------GDVKLADFGVAGQL  151 (277)
T ss_pred             --------------------------------CeeccCCChheEEEeCC----------CCEEEccccccccc
Confidence                                            58999999999999754          36899999998654

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.52  E-value=4.1e-14  Score=105.43  Aligned_cols=109  Identities=28%  Similarity=0.511  Sum_probs=91.2

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .....+++|+++++.++||||+++++++.+.  ...++++|+++++++..++...+.+++.....+..+++.++.++|..
T Consensus        46 ~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~  125 (264)
T cd06653          46 KEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN  125 (264)
T ss_pred             HHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4566788999999999999999999988653  56899999999999988776656678888888889999999887743


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       126 ---------------------------------~i~H~dl~p~ni~i~~~----------~~~~l~dfg~~~~~  156 (264)
T cd06653         126 ---------------------------------MIVHRDIKGANILRDSA----------GNVKLGDFGASKRI  156 (264)
T ss_pred             ---------------------------------CEecCCCCHHHEEEcCC----------CCEEECcccccccc
Confidence                                             68999999999999743          36899999998643

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.52  E-value=6e-14  Score=104.09  Aligned_cols=107  Identities=28%  Similarity=0.479  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ...+..|+.+++.++|||++++++++......++++|+++++++..++...  ..++...+..+..+++.++.++|..  
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~--  122 (261)
T cd05034          45 PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR--  122 (261)
T ss_pred             HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            456778999999999999999999999889999999999999998877543  2467888888899999999887643  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       123 -------------------------------~i~h~di~p~nili~~~----------~~~~l~d~g~~~~~  153 (261)
T cd05034         123 -------------------------------NYIHRDLAARNILVGEN----------LVCKIADFGLARLI  153 (261)
T ss_pred             -------------------------------CcccCCcchheEEEcCC----------CCEEECccccceec
Confidence                                           57999999999999854          37899999988654

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.52  E-value=9e-14  Score=104.34  Aligned_cols=109  Identities=28%  Similarity=0.465  Sum_probs=91.9

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+..|+.+++.++|||++++++++.++...|+++|+++++++.+++.. +.+++..+..+..+++.++.++|.. 
T Consensus        43 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~-  120 (277)
T cd06640          43 EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSE-  120 (277)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            34566788899999999999999999999999999999999999999887653 5677788888888898888877642 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       121 --------------------------------~ivH~dl~p~Nil~~~~----------~~~~l~dfg~~~~~  151 (277)
T cd06640         121 --------------------------------KKIHRDIKAANVLLSEQ----------GDVKLADFGVAGQL  151 (277)
T ss_pred             --------------------------------CccCcCCChhhEEEcCC----------CCEEEcccccceec
Confidence                                            57999999999999843          36899999998643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.52  E-value=3.4e-14  Score=107.01  Aligned_cols=109  Identities=24%  Similarity=0.365  Sum_probs=92.1

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|+++++.++||||+++++.+...+..++++||++++++..++...+.+++.....+..+++.++.++|..  
T Consensus        45 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--  122 (284)
T cd06620          45 SVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV--  122 (284)
T ss_pred             hHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHh--
Confidence            345677889999999999999999999999999999999999999987766666788888888888998888876531  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    .+++|+|++|+|++++.+          ..++++|||+++.
T Consensus       123 ------------------------------~~i~H~dl~p~nil~~~~----------~~~~l~d~gl~~~  153 (284)
T cd06620         123 ------------------------------HRIMHRDIKPSNILVNSR----------GQIKLCDFGVSGE  153 (284)
T ss_pred             ------------------------------cCeeccCCCHHHEEECCC----------CcEEEccCCcccc
Confidence                                          147999999999999743          3789999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.52  E-value=4.7e-14  Score=106.15  Aligned_cols=101  Identities=28%  Similarity=0.452  Sum_probs=85.7

Q ss_pred             HHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEE
Q psy11428         15 ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVEL   94 (160)
Q Consensus        15 ~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   94 (160)
                      +++.++...||+++++.+.+.+.+..|+++||++|+++..++...+.+++..+..+..+++.++.++|..          
T Consensus        47 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~----------  116 (278)
T cd05606          47 MLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR----------  116 (278)
T ss_pred             HHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC----------
Confidence            3444555689999999999999999999999999999988776667789999999999999999888753          


Q ss_pred             eeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         95 LHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        95 ~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                             +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       117 -----------------------~i~H~di~p~nili~~~----------~~~kl~dfg~~~~~  147 (278)
T cd05606         117 -----------------------FVVYRDLKPANILLDEH----------GHVRISDLGLACDF  147 (278)
T ss_pred             -----------------------CEEcCCCCHHHEEECCC----------CCEEEccCcCcccc
Confidence                                   58999999999999754          37899999988643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.52  E-value=4.6e-14  Score=104.15  Aligned_cols=108  Identities=33%  Similarity=0.542  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecC--CCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....+.+|++.++.++|||++++++.+.+.+..++++|+++++++..++.....  +++.....+..+++.++.++|.. 
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~-  122 (258)
T smart00219       44 QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK-  122 (258)
T ss_pred             HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC-
Confidence            566888999999999999999999999999999999999999999877654433  78888899999999999887642 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+|++++.+          ..++++|||+++..
T Consensus       123 --------------------------------~~~h~dl~~~nil~~~~----------~~~~l~dfg~~~~~  153 (258)
T smart00219      123 --------------------------------NFIHRDLAARNCLVGEN----------LVVKISDFGLSRDL  153 (258)
T ss_pred             --------------------------------CeeecccccceEEEccC----------CeEEEcccCCceec
Confidence                                            58999999999999743          37899999998654

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.52  E-value=6.2e-14  Score=103.90  Aligned_cols=108  Identities=31%  Similarity=0.513  Sum_probs=88.1

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeee-ecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCK-ESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~-~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ....+.+|+.+++.++|||++++++++ ...+..++++|+++++++..++...+  .+++.....+..+++.++.++|..
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  121 (256)
T cd05082          42 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN  121 (256)
T ss_pred             hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            345677899999999999999999865 45577999999999999988765433  356777888888999999887642


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|+||+|++++.+          ..++++|||+++..
T Consensus       122 ---------------------------------~i~H~dlkp~nil~~~~----------~~~kl~dfg~~~~~  152 (256)
T cd05082         122 ---------------------------------NFVHRDLAARNVLVSED----------NVAKVSDFGLTKEA  152 (256)
T ss_pred             ---------------------------------CEeccccchheEEEcCC----------CcEEecCCccceec
Confidence                                             68999999999999854          37899999998643

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.52  E-value=4.7e-14  Score=107.13  Aligned_cols=107  Identities=28%  Similarity=0.482  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+.+++.++|||++++++.+..++..|+++||++++++..++. ...+++.....+..+++.++.++|..   
T Consensus        59 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~~l~~~L~~LH~~---  134 (297)
T cd06656          59 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETCMDEGQIAAVCRECLQALDFLHSN---  134 (297)
T ss_pred             hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHHHHHH-hCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34567789999999999999999999999999999999999999988764 34567778888888999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+||+++.+          ..++++|||+++..
T Consensus       135 ------------------------------~i~H~dL~p~Nili~~~----------~~~~l~Dfg~~~~~  165 (297)
T cd06656         135 ------------------------------QVIHRDIKSDNILLGMD----------GSVKLTDFGFCAQI  165 (297)
T ss_pred             ------------------------------CcccCCCCHHHEEECCC----------CCEEECcCccceEc
Confidence                                          68999999999999743          37899999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.51  E-value=6.8e-14  Score=105.25  Aligned_cols=107  Identities=27%  Similarity=0.400  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+..++..++.++||||+++++++. ....+++++++++|++.+++.. .+.+++.....+..+++.++.++|..  
T Consensus        52 ~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--  128 (279)
T cd05111          52 TFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH--  128 (279)
T ss_pred             HHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            3455667777889999999999999875 4567889999999999888754 34578888888999999999987742  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|+||+|++++.+          ..++++|||+++.+
T Consensus       129 -------------------------------~iiH~dlkp~nili~~~----------~~~kl~Dfg~~~~~  159 (279)
T cd05111         129 -------------------------------RMVHRNLAARNILLKSD----------SIVQIADFGVADLL  159 (279)
T ss_pred             -------------------------------CEeccccCcceEEEcCC----------CcEEEcCCccceec
Confidence                                           58999999999999743          37899999998643

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.51  E-value=5.5e-14  Score=105.87  Aligned_cols=98  Identities=28%  Similarity=0.449  Sum_probs=83.9

Q ss_pred             HHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEee
Q psy11428         17 KELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLH   96 (160)
Q Consensus        17 ~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~   96 (160)
                      +.+...+||+++.+.+.+..++..++++||++++++..++..++.+++.....+..+++.++.++|..            
T Consensus        49 ~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~------------  116 (279)
T cd05633          49 SLVSTGDCPFIVCMTYAFHTPDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR------------  116 (279)
T ss_pred             HHHhhCCCCcEeEEEEEEecCCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC------------
Confidence            33444579999999999999999999999999999988777777789999999999999999988753            


Q ss_pred             eeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         97 CKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        97 ~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                           +++|+|+||+|++++.+          ..++++|||+++.
T Consensus       117 ---------------------~ivH~dikp~Nil~~~~----------~~~~l~dfg~~~~  146 (279)
T cd05633         117 ---------------------FVVYRDLKPANILLDEH----------GHVRISDLGLACD  146 (279)
T ss_pred             ---------------------CcCCCCCCHHHEEECCC----------CCEEEccCCccee
Confidence                                 58999999999999754          3789999998864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.51  E-value=2.1e-14  Score=111.94  Aligned_cols=101  Identities=29%  Similarity=0.431  Sum_probs=84.7

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         13 RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                      ..|..+++.++||||+++++.+......+++++++.+ ++..++.. .+.+++..+..++.+++.++.++|..       
T Consensus       105 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-------  176 (357)
T PHA03209        105 LIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ-------  176 (357)
T ss_pred             HHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-------
Confidence            4588899999999999999999999999999999854 66555433 35678888888999999999988753       


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                +++|||+||+||+++.+          ..++|+|||+++.
T Consensus       177 --------------------------~ivHrDlkp~Nill~~~----------~~~kl~DfG~a~~  206 (357)
T PHA03209        177 --------------------------RIIHRDVKTENIFINDV----------DQVCIGDLGAAQF  206 (357)
T ss_pred             --------------------------CeecCCCCHHHEEECCC----------CCEEEecCccccc
Confidence                                      68999999999999754          3689999999864

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.51  E-value=4.4e-14  Score=107.92  Aligned_cols=108  Identities=32%  Similarity=0.515  Sum_probs=83.1

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeec--CCcEEEEEEEeCCCceeEEEee---------ecCCCHHHHHHHHHHHHHHHH
Q psy11428         11 LTRHILKELTELHHENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVS---------KGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~--~~~~~lv~e~~~~g~l~~~l~~---------~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ...+|+++++.++||||+++++.+..  +..+|+++|++++ ++..++..         ...+++..+..++.+++.++.
T Consensus        44 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~  122 (317)
T cd07868          44 SACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH  122 (317)
T ss_pred             HHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHH
Confidence            45679999999999999999998753  4568999999865 44333211         124678888899999999999


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++|||+||+||+++.+.      +....+||+|||+++.+
T Consensus       123 ~LH~~---------------------------------~ivHrDlkp~Nil~~~~~------~~~~~~kl~DfG~a~~~  162 (317)
T cd07868         123 YLHAN---------------------------------WVLHRDLKPANILVMGEG------PERGRVKIADMGFARLF  162 (317)
T ss_pred             HHHhC---------------------------------CEEcCCCCHHHEEEecCC------CCcCcEEEeecCceecc
Confidence            88753                                 689999999999996321      23457999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.51  E-value=3.9e-14  Score=105.42  Aligned_cols=108  Identities=27%  Similarity=0.522  Sum_probs=90.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee----ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ....+.+|+++++.++||||+++++++..++..++++|+++++++..++..    ...+++.....+..+++.++.++|.
T Consensus        45 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~  124 (267)
T cd08229          45 ARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHS  124 (267)
T ss_pred             HHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            345677899999999999999999999999999999999999998765532    3456788888889999999998874


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       125 ~---------------------------------~i~H~dl~p~nili~~~----------~~~~l~dfg~~~~~  156 (267)
T cd08229         125 R---------------------------------RVMHRDIKPANVFITAT----------GVVKLGDLGLGRFF  156 (267)
T ss_pred             C---------------------------------CeecCCCCHHHEEEcCC----------CCEEECcchhhhcc
Confidence            3                                 68999999999999744          37899999987644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.51  E-value=4.7e-14  Score=114.61  Aligned_cols=111  Identities=25%  Similarity=0.398  Sum_probs=89.9

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCC--------cEEEEEEEeCCCceeEEEee----ecCCCHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQ--------HVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLK   72 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~--------~~~lv~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~   72 (160)
                      +......+..|+..+..++|+|++++...+....        .+++++||+++|+|.+++..    ...+++.....+..
T Consensus        71 ~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~  150 (496)
T PTZ00283         71 SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFI  150 (496)
T ss_pred             CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHH
Confidence            3455677888999999999999999987664332        37899999999999876543    24578888888999


Q ss_pred             HHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeee
Q psy11428         73 QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADF  152 (160)
Q Consensus        73 ~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~df  152 (160)
                      +++.++.++|..                                 +++||||||+||+++.+          ..++|+||
T Consensus       151 qll~aL~~lH~~---------------------------------~IiHrDLKP~NILl~~~----------~~vkL~DF  187 (496)
T PTZ00283        151 QVLLAVHHVHSK---------------------------------HMIHRDIKSANILLCSN----------GLVKLGDF  187 (496)
T ss_pred             HHHHHHHHHHhC---------------------------------CEecCCCCHHHEEEeCC----------CCEEEEec
Confidence            999999987753                                 68999999999999854          37999999


Q ss_pred             eccccc
Q psy11428        153 GFARFL  158 (160)
Q Consensus       153 g~a~~~  158 (160)
                      |+++.+
T Consensus       188 Gls~~~  193 (496)
T PTZ00283        188 GFSKMY  193 (496)
T ss_pred             ccCeec
Confidence            998754

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.51  E-value=5.3e-14  Score=119.92  Aligned_cols=108  Identities=27%  Similarity=0.318  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-----------cCCCHHHHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-----------GTLSEDTIRIFLKQIVQ   76 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-----------~~~~~~~~~~~~~~~~~   76 (160)
                      ....+..|+++++.++||||+++++++.+++..|++|||++|+++..++...           ...+......+..+++.
T Consensus        45 ~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~  124 (932)
T PRK13184         45 LKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICA  124 (932)
T ss_pred             HHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHH
Confidence            3456788999999999999999999999999999999999999987654321           12234455667788999


Q ss_pred             HHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         77 ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        77 ~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      ++.++|..                                 +++|||+||+||+++.+          +.++++|||+++
T Consensus       125 AL~yLHs~---------------------------------GIIHRDLKPeNILLd~d----------g~vKLiDFGLAk  161 (932)
T PRK13184        125 TIEYVHSK---------------------------------GVLHRDLKPDNILLGLF----------GEVVILDWGAAI  161 (932)
T ss_pred             HHHHHHHC---------------------------------CccccCCchheEEEcCC----------CCEEEEecCcce
Confidence            99888753                                 68999999999999754          368999999987


Q ss_pred             cc
Q psy11428        157 FL  158 (160)
Q Consensus       157 ~~  158 (160)
                      ..
T Consensus       162 ~i  163 (932)
T PRK13184        162 FK  163 (932)
T ss_pred             ec
Confidence            54

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.51  E-value=5.6e-14  Score=104.20  Aligned_cols=109  Identities=36%  Similarity=0.597  Sum_probs=94.4

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+..|+.+++.++||||+++++.+...+..++++||++++++.+++...+..++.....+..+++.++.++|..  
T Consensus        41 ~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~--  118 (264)
T cd06626          41 KTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH--  118 (264)
T ss_pred             HHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHC--
Confidence            466778899999999999999999999999999999999999999998877666678888888889999999887753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|.||+++.+          ..++++|||++..+
T Consensus       119 -------------------------------~i~H~dl~~~nil~~~~----------~~~kl~d~g~~~~~  149 (264)
T cd06626         119 -------------------------------GIVHRDIKPANIFLDHN----------GVIKLGDFGCAVKL  149 (264)
T ss_pred             -------------------------------CcccCCCCHHHEEECCC----------CCEEEccccccccc
Confidence                                           68999999999999853          37899999988644

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.51  E-value=9.1e-14  Score=102.85  Aligned_cols=109  Identities=35%  Similarity=0.605  Sum_probs=91.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .....+.+|+++++.++|||++++.+.+.+.+..|+++|+++++++..++....  ..++.....+..+++.++.++|..
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (256)
T cd08218          41 KEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR  120 (256)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            344577889999999999999999999999999999999999999877664432  467788888889999999887642


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|++|+|++++.+          ..++++|||++..+
T Consensus       121 ---------------------------------~i~h~~l~~~nil~~~~----------~~~~l~d~~~~~~~  151 (256)
T cd08218         121 ---------------------------------KILHRDIKSQNIFLTKD----------GTIKLGDFGIARVL  151 (256)
T ss_pred             ---------------------------------CEecCCCCHHHEEEcCC----------CCEEEeeccceeec
Confidence                                             68999999999999743          36899999988643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.51  E-value=1.1e-13  Score=102.91  Aligned_cols=108  Identities=30%  Similarity=0.524  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee----ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ......+|+++++.++|+|++++++.+...+..++++||++++++..++..    ...+++..+..++.+++.++.++|.
T Consensus        45 ~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~  124 (267)
T cd08224          45 ARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHS  124 (267)
T ss_pred             hHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence            355677899999999999999999999999999999999999998766532    2346788888889999999988764


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       125 ~---------------------------------~i~h~dl~p~nil~~~~----------~~~~l~d~~~~~~~  156 (267)
T cd08224         125 K---------------------------------RIMHRDIKPANVFITAT----------GVVKLGDLGLGRFF  156 (267)
T ss_pred             C---------------------------------CEecCCcChhhEEECCC----------CcEEEeccceeeec
Confidence            2                                 68999999999999754          37899999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.51  E-value=8.6e-14  Score=102.44  Aligned_cols=109  Identities=27%  Similarity=0.518  Sum_probs=94.4

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|+++++.++|||++++.+.+...+..++++++++++++.+++...+.+++.....+..+++.++.++|..  
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~--  118 (254)
T cd06627          41 EALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ--  118 (254)
T ss_pred             HHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC--
Confidence            456778899999999999999999999999999999999999999988776667788888888999999999887642  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+|++++.+          ..++++|||+++..
T Consensus       119 -------------------------------~i~H~dl~p~ni~i~~~----------~~~~l~d~~~~~~~  149 (254)
T cd06627         119 -------------------------------GVIHRDIKAANILTTKD----------GVVKLADFGVATKL  149 (254)
T ss_pred             -------------------------------CcccCCCCHHHEEECCC----------CCEEEeccccceec
Confidence                                           68999999999999843          37899999988754

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.50  E-value=7.3e-14  Score=103.70  Aligned_cols=108  Identities=27%  Similarity=0.395  Sum_probs=86.4

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeee-cCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKE-SDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~-~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .....+.+|..+++.++|||++++++.+. .++..+++++|++++++..++... ...+......+..+++.++.++|..
T Consensus        38 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  117 (262)
T cd05058          38 EEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK  117 (262)
T ss_pred             HHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34567788999999999999999999654 566789999999999998876543 2345566667778899999887642


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                       +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       118 ---------------------------------~i~H~dlk~~nili~~~----------~~~kl~dfg~~~~  147 (262)
T cd05058         118 ---------------------------------KFVHRDLAARNCMLDES----------FTVKVADFGLARD  147 (262)
T ss_pred             ---------------------------------CccccccCcceEEEcCC----------CcEEECCcccccc
Confidence                                             58999999999999754          3789999999864

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.50  E-value=4e-14  Score=104.65  Aligned_cols=102  Identities=42%  Similarity=0.670  Sum_probs=90.3

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCcee
Q psy11428         13 RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVV   92 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv   92 (160)
                      ..|++.++.++||||+++++.+......++++++++++++..++...+.++...+..+..++++++..+|..        
T Consensus        46 ~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~--------  117 (260)
T PF00069_consen   46 IREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK--------  117 (260)
T ss_dssp             HHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT--------
T ss_pred             hhhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--------
Confidence            448899999999999999999999999999999999999988776667789999999999999999988763        


Q ss_pred             EEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         93 ELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        93 ~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                               +++|+|+||+||+++.+          ..++++|||.+..
T Consensus       118 -------------------------~i~H~dikp~NIl~~~~----------~~~~l~Dfg~~~~  147 (260)
T PF00069_consen  118 -------------------------GIVHRDIKPENILLDEN----------GEVKLIDFGSSVK  147 (260)
T ss_dssp             -------------------------TEEESSBSGGGEEESTT----------SEEEESSGTTTEE
T ss_pred             -------------------------ccccccccccccccccc----------ccccccccccccc
Confidence                                     68999999999999844          3789999999863

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.50  E-value=5e-14  Score=106.17  Aligned_cols=108  Identities=28%  Similarity=0.430  Sum_probs=88.8

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----------------------CCCH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------------------TLSE   64 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----------------------~~~~   64 (160)
                      +....+.+|+.+++.++|||++++++++......++++|+++++++..++....                      .+++
T Consensus        50 ~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  129 (288)
T cd05050          50 DMQADFQREAALMAEFDHPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSC  129 (288)
T ss_pred             HHHHHHHHHHHHHHhcCCCchheEEEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCH
Confidence            345668889999999999999999999999999999999999998877664221                      2456


Q ss_pred             HHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCC
Q psy11428         65 DTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQH  144 (160)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~  144 (160)
                      .....+..+++.++.++|..                                 +++|+|++|+|++++.+          
T Consensus       130 ~~~~~~~~~i~~aL~~lH~~---------------------------------~i~H~dl~p~nil~~~~----------  166 (288)
T cd05050         130 TEQLCIAKQVAAGMAYLSER---------------------------------KFVHRDLATRNCLVGEN----------  166 (288)
T ss_pred             HHHHHHHHHHHHHHHHHHhC---------------------------------CeecccccHhheEecCC----------
Confidence            66778889999999887742                                 58999999999999743          


Q ss_pred             ceEEEeeeecccc
Q psy11428        145 IKLKIADFGFARF  157 (160)
Q Consensus       145 ~~~~l~dfg~a~~  157 (160)
                      ..++++|||+++.
T Consensus       167 ~~~~l~dfg~~~~  179 (288)
T cd05050         167 MVVKIADFGLSRN  179 (288)
T ss_pred             CceEECcccccee
Confidence            3789999998763

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.50  E-value=4.7e-14  Score=107.15  Aligned_cols=105  Identities=32%  Similarity=0.578  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ......|+++++.++||||+++++++..++..|+++||+++ ++..++.. ...+++..+..+..+++.++.++|..   
T Consensus        48 ~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---  123 (301)
T cd07873          48 PCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---  123 (301)
T ss_pred             hhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            34567799999999999999999999999999999999974 66554433 34567888888889999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|+||+||+++.+          ..++++|||+++.
T Consensus       124 ------------------------------~i~H~dlkp~Nil~~~~----------~~~kl~dfg~~~~  153 (301)
T cd07873         124 ------------------------------KVLHRDLKPQNLLINER----------GELKLADFGLARA  153 (301)
T ss_pred             ------------------------------CeeCCCCCHHHEEECCC----------CcEEECcCcchhc
Confidence                                          68999999999999754          3789999998853

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.50  E-value=8e-14  Score=113.37  Aligned_cols=106  Identities=25%  Similarity=0.415  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-----ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-----KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ...+.+|+++|+.++||||+++++++...+..|++++++.+ ++..++..     ...........++.+++.++.++|.
T Consensus       207 ~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~  285 (501)
T PHA03210        207 AIQLENEILALGRLNHENILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD  285 (501)
T ss_pred             HHHHHHHHHHHHhCCCCCcCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh
Confidence            34567899999999999999999999999999999998854 44333221     1122344556678899999998875


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++||||||+||+++.+          +.++|+|||+++.+
T Consensus       286 ~---------------------------------gIiHrDLKP~NILl~~~----------~~vkL~DFGla~~~  317 (501)
T PHA03210        286 K---------------------------------KLIHRDIKLENIFLNCD----------GKIVLGDFGTAMPF  317 (501)
T ss_pred             C---------------------------------CeecCCCCHHHEEECCC----------CCEEEEeCCCceec
Confidence            3                                 68999999999999754          37899999999754

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.50  E-value=9.7e-14  Score=102.50  Aligned_cols=107  Identities=27%  Similarity=0.460  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+++|++.++.++|||++++.+.+..+...|+++|+++++++.+++.. ...+++.....++.+++.++.++|..   
T Consensus        42 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---  118 (256)
T cd06612          42 LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---  118 (256)
T ss_pred             HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            56788999999999999999999999999999999999999999877643 34568888888999999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|.|++++.+          ..++++|||++..+
T Consensus       119 ------------------------------~i~H~dl~~~ni~~~~~----------~~~~l~dfg~~~~~  149 (256)
T cd06612         119 ------------------------------KKIHRDIKAGNILLNEE----------GQAKLADFGVSGQL  149 (256)
T ss_pred             ------------------------------CcccCCCCcceEEECCC----------CcEEEcccccchhc
Confidence                                          57999999999999854          37899999988654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>KOG1151|consensus

Probab=99.50  E-value=8.1e-14  Score=109.29  Aligned_cols=110  Identities=34%  Similarity=0.515  Sum_probs=94.6

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeee-cCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         11 LTRHILKELTELHHENVVELLHCKE-SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~-~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      -+..|.+|-+.|.||.||++++.|. +....|-|.||++|.+|-.|++.++.+++.+.++++.+++.++.++....    
T Consensus       513 HAcREyrIHKeLDHpRIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEik----  588 (775)
T KOG1151|consen  513 HACREYRIHKELDHPRIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIK----  588 (775)
T ss_pred             HHHHHHhhhhccCcceeeeeeeeeeeccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccC----
Confidence            4667899999999999999999776 66788999999999999999999999999999999999999999875321    


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                 +++||-|+||.|||+....       ..+.+||.|||+++-.
T Consensus       589 ---------------------------pPIIHYDLKPgNILLv~Gt-------acGeIKITDFGLSKIM  623 (775)
T KOG1151|consen  589 ---------------------------PPIIHYDLKPGNILLVNGT-------ACGEIKITDFGLSKIM  623 (775)
T ss_pred             ---------------------------CCeeeeccCCccEEEecCc-------ccceeEeeecchhhhc
Confidence                                       4799999999999997422       4568999999998743

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.50  E-value=6.3e-14  Score=112.26  Aligned_cols=104  Identities=31%  Similarity=0.442  Sum_probs=80.4

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeeec--------CCcEEEEEEEeCCCceeEEE----eeecCCCHHHHHHHHHHHHHHHH
Q psy11428         12 TRHILKELTELHHENVVELLHCKES--------DQHVYLVMEFCNGGDLADYL----VSKGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~~--------~~~~~lv~e~~~~g~l~~~l----~~~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ...|+.+++.++||||+++.+.+..        ...++++|||++++ +..++    .....++......+..+++.++.
T Consensus       106 ~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~  184 (440)
T PTZ00036        106 KNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQT-VHKYMKHYARNNHALPLFLVKLYSYQLCRALA  184 (440)
T ss_pred             HHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCcc-HHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHH
Confidence            4569999999999999999776532        23477999999864 33322    23456788888889999999999


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++||||||+||+++.++         ..+||+|||+++.+
T Consensus       185 yLH~~---------------------------------~IiHrDLKp~NILl~~~~---------~~vkL~DFGla~~~  221 (440)
T PTZ00036        185 YIHSK---------------------------------FICHRDLKPQNLLIDPNT---------HTLKLCDFGSAKNL  221 (440)
T ss_pred             HHHHC---------------------------------CEecCCcCHHHEEEcCCC---------Cceeeeccccchhc
Confidence            88753                                 689999999999997432         36899999999754

>KOG4279|consensus

Probab=99.50  E-value=1.3e-14  Score=118.74  Aligned_cols=104  Identities=34%  Similarity=0.499  Sum_probs=91.3

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCC--CHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         12 TRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTL--SEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      .+.|+..-+.|+|.|||+++|++..+++.-++||-.+||+|...++. .|++  .+.+...+.+|++++++++|..    
T Consensus       619 LhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen----  694 (1226)
T KOG4279|consen  619 LHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN----  694 (1226)
T ss_pred             HHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc----
Confidence            46688889999999999999999999999999999999999988765 4777  6788889999999999998753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   +++|||||-+|||++.-.         +.+||+|||.++-
T Consensus       695 -----------------------------~IVHRDIKGDNVLvNTyS---------GvlKISDFGTsKR  725 (1226)
T KOG4279|consen  695 -----------------------------KIVHRDIKGDNVLVNTYS---------GVLKISDFGTSKR  725 (1226)
T ss_pred             -----------------------------ceeeccccCCcEEEeecc---------ceEEecccccchh
Confidence                                         689999999999998643         4899999998853

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.50  E-value=1.9e-13  Score=102.63  Aligned_cols=107  Identities=30%  Similarity=0.499  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+.+++.++|||++++++.+..+...|+++||++++++..++.. +.++......+..+++.++.++|..   
T Consensus        45 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~---  120 (277)
T cd06641          45 EIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSE---  120 (277)
T ss_pred             HHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccC---
Confidence            345677899999999999999999999999999999999999998877643 4577888888889999998877632   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|.|++++.+          ..++++|||+++.+
T Consensus       121 ------------------------------~i~h~dl~p~Ni~i~~~----------~~~~l~dfg~~~~~  151 (277)
T cd06641         121 ------------------------------KKIHRDIKAANVLLSEH----------GEVKLADFGVAGQL  151 (277)
T ss_pred             ------------------------------CeecCCCCHHhEEECCC----------CCEEEeecccceec
Confidence                                          68999999999999743          36899999988644

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.50  E-value=8.2e-14  Score=106.41  Aligned_cols=109  Identities=29%  Similarity=0.473  Sum_probs=92.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .....+..|++.++.++||||+++++.+.+....|+++|++.++++..++...  ..+++.....+..+++.++.++|..
T Consensus        43 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~  122 (316)
T cd05574          43 NKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL  122 (316)
T ss_pred             HHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC
Confidence            35567788999999999999999999999999999999999999998776432  4577888888889999999888742


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|+||+||+++.+          ..++++|||++...
T Consensus       123 ---------------------------------~i~H~dlkp~Nili~~~----------~~~~l~dfg~~~~~  153 (316)
T cd05574         123 ---------------------------------GIVYRDLKPENILLHES----------GHIMLSDFDLSKQS  153 (316)
T ss_pred             ---------------------------------CeeccCCChHHeEEcCC----------CCEEEeecchhhcc
Confidence                                             68999999999999854          37899999988643

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.50  E-value=9.7e-14  Score=104.21  Aligned_cols=105  Identities=35%  Similarity=0.559  Sum_probs=87.1

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee---ecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS---KGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+|+.+++.++|||++++++.+..++..|+++||++ +++..++..   ...+++..+..+..+++.++.++|.. 
T Consensus        43 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~-  120 (285)
T cd07861          43 PSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR-  120 (285)
T ss_pred             hHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            4567789999999999999999999999999999999997 455544432   24578888888999999999988742 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++|+|++|+||+++.+          +.++|+|||+++.
T Consensus       121 --------------------------------~i~H~dl~p~nil~~~~----------~~~~l~dfg~~~~  150 (285)
T cd07861         121 --------------------------------RVLHRDLKPQNLLIDNK----------GVIKLADFGLARA  150 (285)
T ss_pred             --------------------------------CeeecCCCHHHEEEcCC----------CcEEECcccceee
Confidence                                            58999999999999754          3789999998753

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.50  E-value=1.5e-13  Score=101.46  Aligned_cols=107  Identities=28%  Similarity=0.418  Sum_probs=89.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|+.+++.++||||+++++.+......++++|+++++++.+++... ...+......+..+++.++.++|..  
T Consensus        35 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~--  112 (251)
T cd05041          35 LKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK--  112 (251)
T ss_pred             HHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            4557788999999999999999999999999999999999999998776442 3467777777888888888877642  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       113 -------------------------------~i~h~di~p~nili~~~----------~~~~l~d~g~~~~  142 (251)
T cd05041         113 -------------------------------NCIHRDLAARNCLVGEN----------NVLKISDFGMSRE  142 (251)
T ss_pred             -------------------------------CEehhhcCcceEEEcCC----------CcEEEeecccccc
Confidence                                           57999999999999743          3789999998864

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.50  E-value=1.2e-13  Score=107.67  Aligned_cols=105  Identities=32%  Similarity=0.526  Sum_probs=82.9

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCC------cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQ------HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~------~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      .....+.+|+.+++.++||||+++++++....      ..|+++||+.++ +...+  ...+++..+..++.+++.++.+
T Consensus        62 ~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~--~~~~~~~~~~~~~~qi~~~L~~  138 (359)
T cd07876          62 THAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN-LCQVI--HMELDHERMSYLLYQMLCGIKH  138 (359)
T ss_pred             hHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEEEEeCCCcC-HHHHH--hccCCHHHHHHHHHHHHHHHHH
Confidence            44556778999999999999999999876443      479999999764 33322  2346777788888999999998


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +|..                                 +++||||||+||+++.+          +.++|+|||+++.
T Consensus       139 LH~~---------------------------------~ivHrDlkp~NIl~~~~----------~~~kl~Dfg~a~~  172 (359)
T cd07876         139 LHSA---------------------------------GIIHRDLKPSNIVVKSD----------CTLKILDFGLART  172 (359)
T ss_pred             HHhC---------------------------------CcccCCCCHHHEEECCC----------CCEEEecCCCccc
Confidence            8753                                 68999999999999854          3789999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.49  E-value=9.1e-14  Score=105.58  Aligned_cols=107  Identities=28%  Similarity=0.509  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++|||++++++.+......|+++||++++++..++.. ..+++.....+..+++.++.++|..   
T Consensus        59 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~---  134 (296)
T cd06655          59 KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHAN---  134 (296)
T ss_pred             hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            345677899999999999999999999999999999999999999876643 4578888888889999999887753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       135 ------------------------------~i~H~dL~p~Nili~~~----------~~~kl~dfg~~~~~  165 (296)
T cd06655         135 ------------------------------QVIHRDIKSDNVLLGMD----------GSVKLTDFGFCAQI  165 (296)
T ss_pred             ------------------------------CcccCCCCHHHEEECCC----------CCEEEccCccchhc
Confidence                                          58999999999999744          37899999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.49  E-value=1.3e-13  Score=103.43  Aligned_cols=109  Identities=27%  Similarity=0.352  Sum_probs=89.3

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .+....+..|..+++.++|||++++++.+.. ...+++++++++|++...+.. .+.+++.....+..+++.++.++|..
T Consensus        50 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~  128 (279)
T cd05109          50 PKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV  128 (279)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3345566788888999999999999998764 567899999999999887755 34578888888999999999988753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|||+||+|++++.+          ..++|+|||+++.+
T Consensus       129 ---------------------------------~iiH~dlkp~Nil~~~~----------~~~kL~dfG~~~~~  159 (279)
T cd05109         129 ---------------------------------RLVHRDLAARNVLVKSP----------NHVKITDFGLARLL  159 (279)
T ss_pred             ---------------------------------CeeccccccceEEEcCC----------CcEEECCCCceeec
Confidence                                             68999999999999743          36899999998754

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.49  E-value=9.4e-14  Score=103.21  Aligned_cols=114  Identities=18%  Similarity=0.182  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+..|..+++.++|||++++++.+..+...++++||+++|++..++...+ .+++.....+..+++.++.++|..  
T Consensus        42 ~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--  119 (258)
T cd05078          42 YSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK--  119 (258)
T ss_pred             HHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            34566778889999999999999999998899999999999999988876543 467778888889999999887642  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                     +++|||+||+|++++.++...  ......++++|||++.
T Consensus       120 -------------------------------~iiH~dlkp~nili~~~~~~~--~~~~~~~~l~d~g~~~  156 (258)
T cd05078         120 -------------------------------GLTHGNVCAKNVLLIREEDRK--TGNPPFIKLSDPGISI  156 (258)
T ss_pred             -------------------------------CeecCCCccceEEEecccccc--cCCCceEEeccccccc
Confidence                                           689999999999998643100  0012347899999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0579|consensus

Probab=99.49  E-value=1.4e-14  Score=117.56  Aligned_cols=112  Identities=30%  Similarity=0.516  Sum_probs=96.4

Q ss_pred             ccchhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          3 TQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         3 ~~~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      |.+...+..+.-|++||..+.||+|+.|+++|...+.++++.|||+||-+-..+.. ...+.+..+++++.+.+.++.++
T Consensus        67 tkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~L  146 (1187)
T KOG0579|consen   67 TKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWL  146 (1187)
T ss_pred             ccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHH
Confidence            56777888889999999999999999999999999999999999999976443333 34688999999999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      |..                                 .+||||+|+.|||++.+|          .++++|||.+..
T Consensus       147 Hs~---------------------------------~iIHRDLKAGNiL~TldG----------dirLADFGVSAK  179 (1187)
T KOG0579|consen  147 HSQ---------------------------------NIIHRDLKAGNILLTLDG----------DIRLADFGVSAK  179 (1187)
T ss_pred             hhc---------------------------------chhhhhccccceEEEecC----------cEeeeccccccc
Confidence            764                                 589999999999999554          789999998753

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.49  E-value=1.1e-13  Score=104.56  Aligned_cols=104  Identities=36%  Similarity=0.561  Sum_probs=83.7

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe-eecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ....+|+++++.++|+||+++.+++..+...|+++|++. +++..++. ..+.+++.....+..+++.++.++|..    
T Consensus        48 ~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~----  122 (291)
T cd07870          48 FTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ----  122 (291)
T ss_pred             HHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            355678999999999999999999999999999999996 45544332 234466777777888999999887642    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   +++|+|+||+|++++.+          ..++|+|||+++.
T Consensus       123 -----------------------------~i~H~dlkp~Nil~~~~----------~~~~l~Dfg~~~~  152 (291)
T cd07870         123 -----------------------------HILHRDLKPQNLLISYL----------GELKLADFGLARA  152 (291)
T ss_pred             -----------------------------CcccCCCChHHEEEcCC----------CcEEEeccccccc
Confidence                                         58999999999999754          3789999998864

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.49  E-value=1.2e-13  Score=102.98  Aligned_cols=113  Identities=26%  Similarity=0.342  Sum_probs=90.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-------cCCCHHHHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-------GTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-------~~~~~~~~~~~~~~~~~~~~   79 (160)
                      .....+.+|+.+++.++||||+++++.+...+..++++|+++++++..++...       ..++...+..+..+++.++.
T Consensus        41 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  120 (269)
T cd05044          41 QEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV  120 (269)
T ss_pred             hhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHH
Confidence            34556778999999999999999999999999999999999999998776432       22456777778889999998


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      ++|..                                 +++|+|++|+|++++.++.     +....++++|||+++.
T Consensus       121 ~lH~~---------------------------------~i~H~dl~p~nil~~~~~~-----~~~~~~~l~dfg~~~~  160 (269)
T cd05044         121 YLEQM---------------------------------HFIHRDLAARNCLVSEKGY-----DADRVVKIGDFGLARD  160 (269)
T ss_pred             HHHhC---------------------------------CcccCCCChheEEEecCCC-----CCCcceEECCcccccc
Confidence            87742                                 5799999999999985320     1223689999999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.49  E-value=9.8e-14  Score=103.94  Aligned_cols=108  Identities=31%  Similarity=0.486  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeec--CCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~--~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ....+.+|+.+++.++|||++++++.+..  +...++++|+++++++..++.... .++......+..+++.++.++|..
T Consensus        49 ~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~  128 (284)
T cd05038          49 HRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ  128 (284)
T ss_pred             HHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC
Confidence            45678899999999999999999998776  567999999999999988765433 477888888999999999887742


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|++|.|++++.+          ..++++|||+++..
T Consensus       129 ---------------------------------~i~H~dl~p~nil~~~~----------~~~~l~dfg~~~~~  159 (284)
T cd05038         129 ---------------------------------RYIHRDLAARNILVESE----------DLVKISDFGLAKVL  159 (284)
T ss_pred             ---------------------------------CeecCCCCHHhEEEcCC----------CCEEEccccccccc
Confidence                                             68999999999999854          37899999998754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.49  E-value=8.3e-14  Score=104.64  Aligned_cols=108  Identities=38%  Similarity=0.549  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++||||+++++++..++..++++||++++.+.........+++.....+..+++.++.++|..   
T Consensus        43 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---  119 (288)
T cd07833          43 VKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH---  119 (288)
T ss_pred             chhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34567889999999999999999999999999999999999877765544445678888888899999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       120 ------------------------------~i~H~dl~~~ni~~~~~----------~~~kl~d~g~~~~~  150 (288)
T cd07833         120 ------------------------------NIIHRDIKPENILVSES----------GVLKLCDFGFARAL  150 (288)
T ss_pred             ------------------------------CeecCCCCHHHeEECCC----------CCEEEEeeeccccc
Confidence                                          58999999999999853          37899999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.49  E-value=1.4e-13  Score=102.38  Aligned_cols=105  Identities=29%  Similarity=0.468  Sum_probs=85.8

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+.+|+++++.++|||++++++.+. ....++++|+++++++.+++...  ..++......+..+++.++.++|..   
T Consensus        46 ~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---  121 (260)
T cd05069          46 EAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---  121 (260)
T ss_pred             HHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            45678999999999999999998875 45689999999999998776543  2356777788888999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       122 ------------------------------~i~H~dl~~~Nill~~~----------~~~~l~dfg~~~~~  152 (260)
T cd05069         122 ------------------------------NYIHRDLRAANILVGDN----------LVCKIADFGLARLI  152 (260)
T ss_pred             ------------------------------CEeecccCcceEEEcCC----------CeEEECCCccceEc
Confidence                                          68999999999999754          37899999998754

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.49  E-value=1.3e-13  Score=102.00  Aligned_cols=105  Identities=27%  Similarity=0.469  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+++++.++|||++++++++......++++|+++++++..++... +.+++..+..+..+++.++.++|..    
T Consensus        44 ~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~----  119 (256)
T cd05112          44 EDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS----  119 (256)
T ss_pred             HHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            45778999999999999999999999999999999999999988776543 4567778888888888888887642    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       120 -----------------------------~i~h~dl~p~ni~i~~~----------~~~~l~d~g~~~~  149 (256)
T cd05112         120 -----------------------------NVIHRDLAARNCLVGEN----------QVVKVSDFGMTRF  149 (256)
T ss_pred             -----------------------------CccccccccceEEEcCC----------CeEEECCCcceee
Confidence                                         58999999999999743          3789999998864

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.49  E-value=3.2e-14  Score=107.90  Aligned_cols=106  Identities=29%  Similarity=0.531  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+..++.++|||++++++.+..++..|+++|+++++++..++. .+.+++.....+..+++.++.++|..   
T Consensus        62 ~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~---  137 (292)
T cd06658          62 RRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQ---  137 (292)
T ss_pred             HHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34567789999999999999999999999999999999999999887653 34578888888999999999887753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|++|+|++++.+          ..++++|||++..
T Consensus       138 ------------------------------~ivH~dlkp~Nill~~~----------~~~kL~dfg~~~~  167 (292)
T cd06658         138 ------------------------------GVIHRDIKSDSILLTSD----------GRIKLSDFGFCAQ  167 (292)
T ss_pred             ------------------------------CEeecCCCHHHEEEcCC----------CCEEEccCcchhh
Confidence                                          58999999999999754          3789999998864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.49  E-value=1.5e-13  Score=101.64  Aligned_cols=109  Identities=36%  Similarity=0.559  Sum_probs=89.1

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeec-CCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKES-DQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~-~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      .....+.+|+++++.++|||++++.+.+.. ....|+++|+++++++.+++..  ...+++.....++.+++.++..+|.
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~  120 (257)
T cd08223          41 RERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHE  120 (257)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            445667889999999999999999987764 4568999999999998776654  2347888888899999999988764


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|++|+|++++.+          ..++++|||++..+
T Consensus       121 ~---------------------------------~i~H~di~p~nil~~~~----------~~~~l~df~~~~~~  152 (257)
T cd08223         121 K---------------------------------HILHRDLKTQNVFLTRT----------NIIKVGDLGIARVL  152 (257)
T ss_pred             C---------------------------------CeeccCCCchhEEEecC----------CcEEEecccceEEe
Confidence            2                                 68999999999999743          37899999988654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.49  E-value=1.5e-13  Score=102.15  Aligned_cols=107  Identities=31%  Similarity=0.490  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....+.+|+++++.++|+|++++++.+.. ...++++||++++++.+++...  ...+......+..+++.++.++|.. 
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~-  121 (260)
T cd05073          44 SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-  121 (260)
T ss_pred             HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC-
Confidence            45567789999999999999999998877 7889999999999998776542  2356667777888999999887642 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+|++++.+          ..++++|||.++.+
T Consensus       122 --------------------------------~i~H~dl~p~ni~i~~~----------~~~~l~d~~~~~~~  152 (260)
T cd05073         122 --------------------------------NYIHRDLRAANILVSAS----------LVCKIADFGLARVI  152 (260)
T ss_pred             --------------------------------CccccccCcceEEEcCC----------CcEEECCCcceeec
Confidence                                            57999999999999743          37899999988644

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.49  E-value=1.2e-13  Score=106.90  Aligned_cols=110  Identities=34%  Similarity=0.527  Sum_probs=86.7

Q ss_pred             hhHHHHHHHHHHHHhhc-CCcceEEEeeeee-cCCcEEEEEEEeCCCceeEEEeee------------------------
Q psy11428          6 KSSIVLTRHILKELTEL-HHENVVELLHCKE-SDQHVYLVMEFCNGGDLADYLVSK------------------------   59 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~-~~~~~~lv~e~~~~g~l~~~l~~~------------------------   59 (160)
                      ......+..|+.+++.+ +||||+++++++. ....+++++||++++++..++...                        
T Consensus        51 ~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  130 (337)
T cd05054          51 ASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKK  130 (337)
T ss_pred             HHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccc
Confidence            34455667899999999 8999999998765 446789999999999887654321                        


Q ss_pred             -------------------------------------cCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC
Q psy11428         60 -------------------------------------GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ  102 (160)
Q Consensus        60 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~  102 (160)
                                                           ..+++.....+..+++.++.++|..                  
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~------------------  192 (337)
T cd05054         131 QRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASR------------------  192 (337)
T ss_pred             cccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC------------------
Confidence                                                 1456667777888999999887742                  


Q ss_pred             eeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428        103 HVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus       103 ~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                     +++|||+||.||+++.+          ..++|+|||+++.+
T Consensus       193 ---------------~ivHrDikp~Nill~~~----------~~vkL~DfG~a~~~  223 (337)
T cd05054         193 ---------------KCIHRDLAARNILLSEN----------NVVKICDFGLARDI  223 (337)
T ss_pred             ---------------CeecCCCCcceEEEeCC----------CcEEEeccccchhc
Confidence                           68999999999999843          37899999998754

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.48  E-value=1.4e-13  Score=101.92  Aligned_cols=108  Identities=31%  Similarity=0.504  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhh-hhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV-KEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l   86 (160)
                      ....+..|++.+..++|||++++++.+......++++|+++++++..++...+.+++.....++.++++++.++|. .  
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~--  119 (264)
T cd06623          42 FRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR--  119 (264)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC--
Confidence            4567788999999999999999999999999999999999999999887666778889999999999999988764 2  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       120 -------------------------------~~~H~~l~~~ni~~~~~----------~~~~l~df~~~~~~  150 (264)
T cd06623         120 -------------------------------HIIHRDIKPSNLLINSK----------GEVKIADFGISKVL  150 (264)
T ss_pred             -------------------------------CCccCCCCHHHEEECCC----------CCEEEccCccceec
Confidence                                           57999999999999754          37899999988644

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.48  E-value=1.2e-13  Score=103.22  Aligned_cols=107  Identities=28%  Similarity=0.466  Sum_probs=88.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|+.+++.++|||++++++.+.. ...|+++|+++++++..++.... .+++.....+..+++.++.++|..  
T Consensus        50 ~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--  126 (270)
T cd05056          50 VREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK--  126 (270)
T ss_pred             HHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            44567889999999999999999998765 56789999999999988775433 468888888889999999887642  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+|++++.+          ..++++|||+++..
T Consensus       127 -------------------------------~~~H~dl~p~nili~~~----------~~~~l~d~g~~~~~  157 (270)
T cd05056         127 -------------------------------RFVHRDIAARNVLVSSP----------DCVKLGDFGLSRYL  157 (270)
T ss_pred             -------------------------------CeeccccChheEEEecC----------CCeEEccCceeeec
Confidence                                           58999999999999854          37899999998654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.48  E-value=9.3e-14  Score=119.10  Aligned_cols=128  Identities=29%  Similarity=0.442  Sum_probs=94.0

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeec--CCcEEEEEEEeCCCceeEEEee----ecCCCHHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~--~~~~~lv~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~~~~~~   78 (160)
                      ++.....+..|+.+++.++||||+++++.|..  ...+|+||||+++++|..++..    .+.+++..+..++.+++.++
T Consensus        52 ~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~AL  131 (1021)
T PTZ00266         52 KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHAL  131 (1021)
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHH
Confidence            34455677889999999999999999998753  4578999999999999876643    25688899999999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCC-------CCCCCCceEEEee
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ-------YPQPQHIKLKIAD  151 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~-------~~~~~~~~~~l~d  151 (160)
                      .++|..... +                         +..+++|+||||+||+++......       ...+....++|+|
T Consensus       132 aYLHs~g~~-~-------------------------~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsD  185 (1021)
T PTZ00266        132 AYCHNLKDG-P-------------------------NGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGD  185 (1021)
T ss_pred             HHHHhcccc-c-------------------------ccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEcc
Confidence            988742100 0                         012589999999999997432100       0012234589999


Q ss_pred             eeccccc
Q psy11428        152 FGFARFL  158 (160)
Q Consensus       152 fg~a~~~  158 (160)
                      ||+++.+
T Consensus       186 FGlAr~l  192 (1021)
T PTZ00266        186 FGLSKNI  192 (1021)
T ss_pred             CCccccc
Confidence            9998654

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.48  E-value=1.2e-13  Score=102.01  Aligned_cols=111  Identities=39%  Similarity=0.605  Sum_probs=92.3

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ......+.+|+++++.++|||++++++.+...+..++++|+++++++..++...  ..+++..+..+..+++.++.++|.
T Consensus        40 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~  119 (256)
T cd08220          40 KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHT  119 (256)
T ss_pred             cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            345667889999999999999999999999999999999999999998876543  236788888888999999988764


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|++|+|++++.+         ...++++|||++..+
T Consensus       120 ~---------------------------------~i~h~dl~~~nil~~~~---------~~~~~l~d~~~~~~~  152 (256)
T cd08220         120 K---------------------------------LILHRDLKTQNILLDKH---------KMVVKIGDFGISKIL  152 (256)
T ss_pred             C---------------------------------CeecCCCCHHHEEEcCC---------CCEEEEccCCCceec
Confidence            2                                 58999999999999743         235799999988644

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.48  E-value=2e-13  Score=102.25  Aligned_cols=109  Identities=24%  Similarity=0.508  Sum_probs=90.8

Q ss_pred             hhHHHHHHHHHHHHhhcC---CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          6 KSSIVLTRHILKELTELH---HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~---h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ...+..+..|+++++.++   |||++++++++......|+++||++++++..++.. +.+++.....+..+++.++.++|
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh  118 (277)
T cd06917          40 DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIH  118 (277)
T ss_pred             chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHH
Confidence            344556778888888886   99999999999999999999999999999877644 46788888888999999998876


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|++|+|++++.+          ..++++|||++..+
T Consensus       119 ~~---------------------------------~i~H~dl~p~ni~i~~~----------~~~~l~dfg~~~~~  151 (277)
T cd06917         119 KV---------------------------------GVIHRDIKAANILVTNT----------GNVKLCDFGVAALL  151 (277)
T ss_pred             hC---------------------------------CcccCCcCHHHEEEcCC----------CCEEEccCCceeec
Confidence            42                                 68999999999999853          37899999988654

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.48  E-value=9e-14  Score=104.79  Aligned_cols=107  Identities=27%  Similarity=0.456  Sum_probs=90.7

Q ss_pred             HHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|+.+++.+ +|||++.+.+++..+...|+++||++++++..++...+.+++.....++.++++++.++|..   
T Consensus        48 ~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---  124 (288)
T cd05583          48 AEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL---  124 (288)
T ss_pred             HHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34566788999999 59999999999999999999999999999988776666778888888888999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|.|++++.+          ..++++|||+++.+
T Consensus       125 ------------------------------~~~H~dl~p~nil~~~~----------~~~~l~dfg~~~~~  155 (288)
T cd05583         125 ------------------------------GIIYRDIKLENILLDSE----------GHVVLTDFGLSKEF  155 (288)
T ss_pred             ------------------------------CeeccCCCHHHeEECCC----------CCEEEEECcccccc
Confidence                                          68999999999999743          36899999988653

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.48  E-value=1.7e-13  Score=103.38  Aligned_cols=105  Identities=28%  Similarity=0.506  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+.+|+.+++.++|||++++++.+..++..|+++|+++++++..++.. +.++......++.+++.++.++|..    
T Consensus        60 ~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~----  134 (285)
T cd06648          60 RELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQ----  134 (285)
T ss_pred             HHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            34567788999999999999999999999999999999999999877654 5677888888999999999887753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   +++|+|++|+||+++.+          ..++++|||+++.
T Consensus       135 -----------------------------~i~H~dl~p~Nil~~~~----------~~~~l~d~g~~~~  164 (285)
T cd06648         135 -----------------------------GVIHRDIKSDSILLTSD----------GRVKLSDFGFCAQ  164 (285)
T ss_pred             -----------------------------CeecCCCChhhEEEcCC----------CcEEEcccccchh
Confidence                                         68999999999999754          3789999998753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.47  E-value=1.8e-13  Score=102.02  Aligned_cols=105  Identities=29%  Similarity=0.475  Sum_probs=86.2

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+..|+.+++.++|||++++++.+. ....++++|+++++++.+++...  ..++......+..+++.++.++|..   
T Consensus        46 ~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---  121 (262)
T cd05071          46 EAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---  121 (262)
T ss_pred             HHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            45788999999999999999998774 45689999999999998877542  2356777888889999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.+          ..++++|||.++.+
T Consensus       122 ------------------------------~i~H~dl~p~Nill~~~----------~~~~L~dfg~~~~~  152 (262)
T cd05071         122 ------------------------------NYVHRDLRAANILVGEN----------LVCKVADFGLARLI  152 (262)
T ss_pred             ------------------------------CccccccCcccEEEcCC----------CcEEeccCCceeec
Confidence                                          68999999999999743          37899999998644

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.47  E-value=1.4e-13  Score=101.88  Aligned_cols=104  Identities=33%  Similarity=0.534  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+.+|+.+++.++|||++++++++..+ ..++++||++++++..++....  .++......+..+++.++.++|..   
T Consensus        44 ~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---  119 (254)
T cd05083          44 QAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---  119 (254)
T ss_pred             HHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            4577899999999999999999988665 4799999999999987765432  367777888888999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       120 ------------------------------~~~H~dl~p~nili~~~----------~~~kl~Dfg~~~~  149 (254)
T cd05083         120 ------------------------------KLVHRDLAARNILVSED----------GVAKVSDFGLARV  149 (254)
T ss_pred             ------------------------------CeeccccCcceEEEcCC----------CcEEECCCcccee
Confidence                                          68999999999999754          3789999998863

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.47  E-value=2.5e-13  Score=100.85  Aligned_cols=106  Identities=26%  Similarity=0.455  Sum_probs=87.7

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ...+++|+.+++.++|||++++++.+. ....++++|+++++++..++...  ..++......+..+++.++.++|..  
T Consensus        45 ~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~--  121 (260)
T cd05070          45 PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM--  121 (260)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            346788999999999999999998775 46789999999999998776542  3467888888999999999987753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|.|++++.+          ..++++|||+++.+
T Consensus       122 -------------------------------~i~H~di~p~Nili~~~----------~~~~l~dfg~~~~~  152 (260)
T cd05070         122 -------------------------------NYIHRDLRSANILVGDG----------LVCKIADFGLARLI  152 (260)
T ss_pred             -------------------------------CcccCCCccceEEEeCC----------ceEEeCCceeeeec
Confidence                                           58999999999999853          37899999998643

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.47  E-value=9.4e-14  Score=103.17  Aligned_cols=110  Identities=25%  Similarity=0.407  Sum_probs=91.8

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+.+|+..++.++||||+++++.+...+..++++|+++++++..++... ..+++.....+..+++.++.++|.. 
T Consensus        41 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~-  119 (265)
T cd06605          41 AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK-  119 (265)
T ss_pred             HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC-
Confidence            34456678999999999999999999999999999999999999998877654 6678888888899999998887641 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     .+++|+|++|+|++++.+          +.++++|||.+..+
T Consensus       120 -------------------------------~~i~H~dl~~~ni~~~~~----------~~~~l~d~g~~~~~  151 (265)
T cd06605         120 -------------------------------HKIIHRDVKPSNILVNSR----------GQIKLCDFGVSGQL  151 (265)
T ss_pred             -------------------------------CCeecCCCCHHHEEECCC----------CCEEEeecccchhh
Confidence                                           158999999999999854          36899999987643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.47  E-value=2.5e-13  Score=106.07  Aligned_cols=99  Identities=24%  Similarity=0.282  Sum_probs=75.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEE-EeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVE-LLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~-l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+++|+++|+.++|+|++. +++    .+..|++|||++|++|... .   ...   ...+..++++++.++|.. 
T Consensus        63 ~~~~~~~~E~~iL~~L~h~~iv~~l~~----~~~~~LVmE~~~G~~L~~~-~---~~~---~~~~~~~i~~aL~~lH~~-  130 (365)
T PRK09188         63 LARHLAAREIRALKTVRGIGVVPQLLA----TGKDGLVRGWTEGVPLHLA-R---PHG---DPAWFRSAHRALRDLHRA-  130 (365)
T ss_pred             HHHHHHHHHHHHHHhccCCCCCcEEEE----cCCcEEEEEccCCCCHHHh-C---ccc---hHHHHHHHHHHHHHHHHC-
Confidence            34667899999999999999985 443    2457999999999988621 1   111   134567788888887642 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCC-CCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDL-KPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dl-k~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      +++|||+ ||+|++++.+          ..++|+|||+|+.+.
T Consensus       131 --------------------------------gIiHrDL~KP~NILv~~~----------~~ikLiDFGlA~~~~  163 (365)
T PRK09188        131 --------------------------------GITHNDLAKPQNWLMGPD----------GEAAVIDFQLASVFR  163 (365)
T ss_pred             --------------------------------CCeeCCCCCcceEEEcCC----------CCEEEEECccceecc
Confidence                                            6899999 9999999743          368999999998553

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.47  E-value=7.5e-14  Score=106.08  Aligned_cols=105  Identities=30%  Similarity=0.517  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+.+|+.+++.++|||++++++.+..++..|+++|+++++++...+. ...+++.....+..+++.++.++|..    
T Consensus        62 ~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~----  136 (297)
T cd06659          62 RELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-QTRLNEEQIATVCESVLQALCYLHSQ----  136 (297)
T ss_pred             HHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHHHHh-hcCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            3456778899999999999999999999999999999999999877553 34578888888999999999887642    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       137 -----------------------------~ivH~dl~p~Nill~~~----------~~~kL~dfg~~~~  166 (297)
T cd06659         137 -----------------------------GVIHRDIKSDSILLTLD----------GRVKLSDFGFCAQ  166 (297)
T ss_pred             -----------------------------CeecCCCCHHHeEEccC----------CcEEEeechhHhh
Confidence                                         58999999999999754          3789999998864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>KOG0667|consensus

Probab=99.47  E-value=1.1e-13  Score=111.84  Aligned_cols=111  Identities=31%  Similarity=0.449  Sum_probs=91.6

Q ss_pred             hHHHHHHHHHHHHhhcC-Cc-----ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELH-HE-----NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~-h~-----~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~   78 (160)
                      +-...++-|+++|..|+ |.     |+|+++++|..++..|+|+|++ ..+|.++++..  ..++...++.+..++++++
T Consensus       224 ~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L  302 (586)
T KOG0667|consen  224 RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTAL  302 (586)
T ss_pred             HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHH
Confidence            34566778999998887 32     8999999999999999999988 45888877654  3477889999999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..++..                                 ++||.||||+|||+...        ....+||+|||.+.+.
T Consensus       303 ~~L~~l---------------------------------~IIHcDLKPENILL~~~--------~r~~vKVIDFGSSc~~  341 (586)
T KOG0667|consen  303 LFLHEL---------------------------------GIIHCDLKPENILLKDP--------KRSRIKVIDFGSSCFE  341 (586)
T ss_pred             HHHHhC---------------------------------CeeeccCChhheeeccC--------CcCceeEEeccccccc
Confidence            987642                                 68999999999999743        4558999999999765


Q ss_pred             C
Q psy11428        159 Q  159 (160)
Q Consensus       159 ~  159 (160)
                      .
T Consensus       342 ~  342 (586)
T KOG0667|consen  342 S  342 (586)
T ss_pred             C
Confidence            3

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.47  E-value=6e-14  Score=105.40  Aligned_cols=104  Identities=37%  Similarity=0.648  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+++++.++|||++++++++.+....|+++||+++ ++..++.. .+.+++.....+..++++++.++|..    
T Consensus        44 ~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~----  118 (284)
T cd07839          44 SSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH----  118 (284)
T ss_pred             cchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            3456789999999999999999999999999999999975 55544332 35678888999999999999988753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       119 -----------------------------~i~H~dl~~~nil~~~~----------~~~~l~dfg~~~~  148 (284)
T cd07839         119 -----------------------------NVLHRDLKPQNLLINKN----------GELKLADFGLARA  148 (284)
T ss_pred             -----------------------------CEecCCCCHHHEEEcCC----------CcEEECccchhhc
Confidence                                         68999999999999854          3789999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.47  E-value=3.2e-13  Score=101.53  Aligned_cols=106  Identities=30%  Similarity=0.506  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHhhc-CCcceEEEeeeee-----cCCcEEEEEEEeCCCceeEEEe----eecCCCHHHHHHHHHHHHHHHH
Q psy11428         10 VLTRHILKELTEL-HHENVVELLHCKE-----SDQHVYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus        10 ~~~~~~~~~l~~l-~h~~iv~l~~~~~-----~~~~~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ..+..|+.+++.+ +|||++++++++.     .++..++++||+++++|...+.    ....+++.....+..+++.++.
T Consensus        59 ~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~  138 (286)
T cd06638          59 EEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ  138 (286)
T ss_pred             HHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence            4456788888888 6999999999763     4467899999999999876532    2345677788888899999998


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++|+|++|+|++++.++          .++++|||+++.+
T Consensus       139 ~lH~~---------------------------------~i~H~dlkp~nili~~~~----------~~kl~dfg~~~~~  174 (286)
T cd06638         139 HLHVN---------------------------------KTIHRDVKGNNILLTTEG----------GVKLVDFGVSAQL  174 (286)
T ss_pred             HHHhC---------------------------------CccccCCCHHhEEECCCC----------CEEEccCCceeec
Confidence            87742                                 589999999999998543          6899999998653

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.46  E-value=1.5e-13  Score=103.54  Aligned_cols=103  Identities=37%  Similarity=0.575  Sum_probs=78.5

Q ss_pred             HHHHHHHHh---hcCCcceEEEeeeee-----cCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHh
Q psy11428         12 TRHILKELT---ELHHENVVELLHCKE-----SDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus        12 ~~~~~~~l~---~l~h~~iv~l~~~~~-----~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      ..+|+++++   .++||||+++++++.     .....++++|+++ +++..++...  ..+++.....+..+++.++.++
T Consensus        48 ~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~l  126 (290)
T cd07862          48 TIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFL  126 (290)
T ss_pred             HHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            334555554   457999999999875     3456899999996 4666554332  3467888888999999999988


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                 +++|||+||+||+++.+          ..++++|||+++..
T Consensus       127 H~~---------------------------------~iiH~dlkp~Nil~~~~----------~~~kl~Dfg~~~~~  160 (290)
T cd07862         127 HSH---------------------------------RVVHRDLKPQNILVTSS----------GQIKLADFGLARIY  160 (290)
T ss_pred             HHC---------------------------------CeeeCCCCHHHEEEcCC----------CCEEEccccceEec
Confidence            753                                 68999999999999754          37899999998643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.46  E-value=8.5e-14  Score=104.57  Aligned_cols=107  Identities=36%  Similarity=0.587  Sum_probs=90.0

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+.+|+++++.++||||+++++++..++..|+++||+.++.+.........+++.....++.+++.++.++|..    
T Consensus        44 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~----  119 (286)
T cd07846          44 KKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH----  119 (286)
T ss_pred             hHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            3456789999999999999999999999999999999999988776554444578888888999999999887742    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|+|++|+|++++.+          ..++++|||++..+
T Consensus       120 -----------------------------~i~h~~l~p~ni~~~~~----------~~~~l~dfg~~~~~  150 (286)
T cd07846         120 -----------------------------NIIHRDIKPENILVSQS----------GVVKLCDFGFARTL  150 (286)
T ss_pred             -----------------------------CccccCCCHHHEEECCC----------CcEEEEeeeeeeec
Confidence                                         57999999999999754          37899999988643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.46  E-value=1.5e-13  Score=106.84  Aligned_cols=107  Identities=32%  Similarity=0.511  Sum_probs=83.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecC------CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESD------QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~------~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ......+.+|+.+++.++||||+++++++...      ...|+++|++.++ +...+.  ..++......+..+++.++.
T Consensus        57 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~--~~l~~~~~~~~~~qi~~aL~  133 (355)
T cd07874          57 QTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLVMELMDAN-LCQVIQ--MELDHERMSYLLYQMLCGIK  133 (355)
T ss_pred             hHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEEhhhhccc-HHHHHh--hcCCHHHHHHHHHHHHHHHH
Confidence            34456677899999999999999999987543      3579999999764 433322  34677777888899999999


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++|||+||+||+++.+          ..++|+|||+++..
T Consensus       134 ~LH~~---------------------------------givHrDikp~Nill~~~----------~~~kl~Dfg~~~~~  169 (355)
T cd07874         134 HLHSA---------------------------------GIIHRDLKPSNIVVKSD----------CTLKILDFGLARTA  169 (355)
T ss_pred             HHHhC---------------------------------CcccCCCChHHEEECCC----------CCEEEeeCcccccC
Confidence            88753                                 68999999999999754          37899999998743

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.46  E-value=3.4e-13  Score=102.73  Aligned_cols=106  Identities=32%  Similarity=0.476  Sum_probs=85.9

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe-eecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+..|+++++.++|||++++.+++...+..++++||+.++ +...+. ..+.+++.....+..+++.++.++|..   
T Consensus        59 ~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~g~-l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---  134 (307)
T cd06607          59 WQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCLGS-ASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---  134 (307)
T ss_pred             HHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhCCC-HHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            345678999999999999999999999999999999999754 333222 234578888888899999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+||+++.+          +.++++|||+++..
T Consensus       135 ------------------------------~i~H~dl~p~nIl~~~~----------~~~kL~dfg~~~~~  165 (307)
T cd06607         135 ------------------------------ERIHRDIKAGNILLTEP----------GTVKLADFGSASLV  165 (307)
T ss_pred             ------------------------------CceecCCCcccEEECCC----------CCEEEeecCcceec
Confidence                                          58999999999999754          37899999988643

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.46  E-value=2.3e-13  Score=102.11  Aligned_cols=110  Identities=21%  Similarity=0.349  Sum_probs=90.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeec-CCcEEEEEEEeCCCceeEEEeee--------cCCCHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKES-DQHVYLVMEFCNGGDLADYLVSK--------GTLSEDTIRIFLKQIVQ   76 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~-~~~~~lv~e~~~~g~l~~~l~~~--------~~~~~~~~~~~~~~~~~   76 (160)
                      ......+.+|+.+++.++|||++++++.+.. +...++++++.+++++..++...        ..+++.....+..+++.
T Consensus        49 ~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~  128 (280)
T cd05043          49 EIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIAC  128 (280)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHH
Confidence            4556777889999999999999999996554 57889999999999988776432        34678888889999999


Q ss_pred             HHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         77 ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        77 ~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      ++.++|..                                 +++|+|++|+|++++.+          ..++++|||+++
T Consensus       129 ~l~~LH~~---------------------------------~i~H~di~p~nil~~~~----------~~~kl~d~g~~~  165 (280)
T cd05043         129 GMSYLHKR---------------------------------GVIHKDIAARNCVIDEE----------LQVKITDNALSR  165 (280)
T ss_pred             HHHHHHHC---------------------------------CEeecccCHhhEEEcCC----------CcEEECCCCCcc
Confidence            99988742                                 58999999999999743          378999999987


Q ss_pred             cc
Q psy11428        157 FL  158 (160)
Q Consensus       157 ~~  158 (160)
                      .+
T Consensus       166 ~~  167 (280)
T cd05043         166 DL  167 (280)
T ss_pred             cc
Confidence            43

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.46  E-value=1.3e-13  Score=101.53  Aligned_cols=107  Identities=34%  Similarity=0.553  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .+..+..|+.+++.++|||++++++.+..+...|+++|+++++++..++...+.+++.....+..++++++.++|..   
T Consensus        36 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~---  112 (250)
T cd05123          36 EVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSL---  112 (250)
T ss_pred             HHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            56678889999999999999999999999999999999999999988876666788888899999999999887752   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|++|.|++++.+          ..++++|||++..
T Consensus       113 ------------------------------~~~H~~l~p~ni~~~~~----------~~~~l~d~~~~~~  142 (250)
T cd05123         113 ------------------------------GIIYRDLKPENILLDAD----------GHIKLTDFGLAKE  142 (250)
T ss_pred             ------------------------------CceecCCCcceEEEcCC----------CcEEEeecCccee
Confidence                                          57999999999999854          3689999998764

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0193|consensus

Probab=99.46  E-value=1.6e-13  Score=110.50  Aligned_cols=111  Identities=26%  Similarity=0.442  Sum_probs=93.8

Q ss_pred             cccchhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHH
Q psy11428          2 ATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         2 ~~~~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      ..-+++...+|++|+..+++-+|.||+=+.|++...+. -++.-+|.|.+|..++... ..+.......+.+|+++++.|
T Consensus       425 ~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~Y  503 (678)
T KOG0193|consen  425 DDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDY  503 (678)
T ss_pred             CCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhh
Confidence            34577899999999999999999999999998876555 8999999999999988654 346677788889999999888


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      +|..                                 .|||||+|..||++..+          ..+||+|||++.
T Consensus       504 LHAK---------------------------------~IIHrDLKSnNIFl~~~----------~kVkIgDFGLat  536 (678)
T KOG0193|consen  504 LHAK---------------------------------NIIHRDLKSNNIFLHED----------LKVKIGDFGLAT  536 (678)
T ss_pred             hhhh---------------------------------hhhhhhccccceEEccC----------CcEEEeccccee
Confidence            7643                                 58999999999999743          489999999985

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.46  E-value=4.1e-13  Score=98.33  Aligned_cols=108  Identities=32%  Similarity=0.541  Sum_probs=92.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|++.++.++||+++++.+.+......++++|+++++++.+++... +.+++.....+..+++.++..+|..  
T Consensus        40 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~--  117 (253)
T cd05122          40 KKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN--  117 (253)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC--
Confidence            4567888999999999999999999999999999999999999998876554 5678888888999999998877642  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|.||+++.+          ..++|+|||.+...
T Consensus       118 -------------------------------~i~h~dl~p~ni~i~~~----------~~~~l~d~~~~~~~  148 (253)
T cd05122         118 -------------------------------GIIHRDIKAANILLTSD----------GEVKLIDFGLSAQL  148 (253)
T ss_pred             -------------------------------CEecCCCCHHHEEEccC----------CeEEEeeccccccc
Confidence                                           58999999999999853          37899999988654

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.46  E-value=1.9e-13  Score=103.09  Aligned_cols=103  Identities=38%  Similarity=0.605  Sum_probs=86.2

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      .+.+|+++++.++||||+++++++.+....|+++||+++ ++..++... +.+++.....++.++++++.++|..     
T Consensus        49 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~-----  122 (291)
T cd07844          49 TAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR-----  122 (291)
T ss_pred             hHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-----
Confidence            355799999999999999999999999999999999985 776655432 3567888888899999999988743     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                  +++|+|++|+|++++.+          +.++++|||+++.
T Consensus       123 ----------------------------~i~H~dl~p~nil~~~~----------~~~kl~dfg~~~~  152 (291)
T cd07844         123 ----------------------------RVLHRDLKPQNLLISER----------GELKLADFGLARA  152 (291)
T ss_pred             ----------------------------CeecccCCHHHEEEcCC----------CCEEECccccccc
Confidence                                        58999999999999854          3789999998764

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.46  E-value=2.2e-13  Score=102.95  Aligned_cols=106  Identities=27%  Similarity=0.475  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ...+.+|+.+++.++||||+++.+++...  ...|+++|++++ ++...+..+ ..+++.....+..+++.++.++|.. 
T Consensus        48 ~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-  125 (293)
T cd07843          48 PITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN-  125 (293)
T ss_pred             hhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            34566799999999999999999988777  899999999975 665544332 3478888899999999999988753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+||+++.+          +.++++|||+++.+
T Consensus       126 --------------------------------~i~H~dl~p~nili~~~----------~~~~l~d~g~~~~~  156 (293)
T cd07843         126 --------------------------------WILHRDLKTSNLLLNNR----------GILKICDFGLAREY  156 (293)
T ss_pred             --------------------------------CeeeccCCHHHEEECCC----------CcEEEeecCceeec
Confidence                                            58999999999999854          37899999988643

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.45  E-value=3.5e-13  Score=99.11  Aligned_cols=109  Identities=31%  Similarity=0.536  Sum_probs=94.4

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .....+++|+..++.++|||++++++.+...  ...++++|+++++++.+++.....+++.....+..+++.++.++|..
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (260)
T cd06606          41 EELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN  120 (260)
T ss_pred             HHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            4577889999999999999999999999888  88999999999999988876666788888889999999999887642


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|++|+||+++.+          ..++++|||.+...
T Consensus       121 ---------------------------------~~~h~dl~p~ni~i~~~----------~~~~l~d~~~~~~~  151 (260)
T cd06606         121 ---------------------------------GIVHRDIKGANILVDSD----------GVVKLADFGCAKRL  151 (260)
T ss_pred             ---------------------------------CccccCCCHHHEEEcCC----------CCEEEcccccEEec
Confidence                                             68999999999999853          37899999988654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.45  E-value=9.8e-14  Score=102.11  Aligned_cols=100  Identities=26%  Similarity=0.338  Sum_probs=83.9

Q ss_pred             HHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEE
Q psy11428         15 ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVEL   94 (160)
Q Consensus        15 ~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   94 (160)
                      +...+....|||++++++.+......|+++||++++++.+++.....+++.....+..++++++.++|..          
T Consensus        35 ~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~----------  104 (237)
T cd05576          35 ERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHRE----------  104 (237)
T ss_pred             HHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhC----------
Confidence            4444455679999999999999999999999999999988776666788888899999999999887742          


Q ss_pred             eeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         95 LHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        95 ~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                             +++|+|+||+|++++.+          ..++++|||.+..
T Consensus       105 -----------------------~i~H~dlkp~Nil~~~~----------~~~~l~df~~~~~  134 (237)
T cd05576         105 -----------------------GIVCRDLNPNNILLDDR----------GHIQLTYFSRWSE  134 (237)
T ss_pred             -----------------------CeeccCCCHHHEEEcCC----------CCEEEecccchhc
Confidence                                   68999999999999854          3689999997653

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.45  E-value=3.6e-13  Score=101.42  Aligned_cols=106  Identities=29%  Similarity=0.518  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|++.++.++|||++++++++......|+++|++++++|.+++..+. .++......+..+++.++.++|..   
T Consensus        59 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---  135 (286)
T cd06614          59 KELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---  135 (286)
T ss_pred             HHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            4567789999999999999999999999999999999999999998877655 678888888999999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|++|+||+++.+          +.++++|||++..
T Consensus       136 ------------------------------gi~H~dl~p~ni~i~~~----------~~~~l~d~~~~~~  165 (286)
T cd06614         136 ------------------------------NVIHRDIKSDNILLSKD----------GSVKLADFGFAAQ  165 (286)
T ss_pred             ------------------------------CeeeCCCChhhEEEcCC----------CCEEECccchhhh
Confidence                                          68999999999999854          3789999998653

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.45  E-value=2.4e-13  Score=105.41  Aligned_cols=108  Identities=35%  Similarity=0.530  Sum_probs=83.0

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeec-CCcEEEEEEEeCCCceeEEEeee-------------------------
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKES-DQHVYLVMEFCNGGDLADYLVSK-------------------------   59 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~-~~~~~lv~e~~~~g~l~~~l~~~-------------------------   59 (160)
                      +....+.+|+.++..+ +||||+++++++.. +..+++++||+++|+|..++...                         
T Consensus        52 ~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (343)
T cd05103          52 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDIS  131 (343)
T ss_pred             HHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchh
Confidence            3455677899999999 68999999987654 45789999999999987654321                         


Q ss_pred             ------------------------------------------cCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeee
Q psy11428         60 ------------------------------------------GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHC   97 (160)
Q Consensus        60 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~   97 (160)
                                                                ..++......+..+++.++.++|..             
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-------------  198 (343)
T cd05103         132 EDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR-------------  198 (343)
T ss_pred             hhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC-------------
Confidence                                                      1234445566777888888877642             


Q ss_pred             eecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         98 KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        98 ~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                          +++|||+||.|++++.+          ..++++|||+++.
T Consensus       199 --------------------~i~H~dikp~Nil~~~~----------~~~kl~dfg~~~~  228 (343)
T cd05103         199 --------------------KCIHRDLAARNILLSEN----------NVVKICDFGLARD  228 (343)
T ss_pred             --------------------CeecCCCccCeEEEcCC----------CcEEEEecccccc
Confidence                                68999999999999744          3789999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=3.3e-13  Score=100.15  Aligned_cols=102  Identities=31%  Similarity=0.555  Sum_probs=85.2

Q ss_pred             HHHHHH-HhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         13 RHILKE-LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        13 ~~~~~~-l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                      ..|..+ ....+|||++++++++..++..|+++||++++++..++...+.+++.....+..+++.++.++|..       
T Consensus        44 ~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~-------  116 (260)
T cd05611          44 KAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR-------  116 (260)
T ss_pred             HHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-------
Confidence            344433 344589999999999999999999999999999988876667788888899999999999988753       


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                +++|+|++|.|++++.+          ..++++|||+++.
T Consensus       117 --------------------------~i~H~dl~p~nil~~~~----------~~~~l~dfg~~~~  146 (260)
T cd05611         117 --------------------------GIIHRDIKPENLLIDQT----------GHLKLTDFGLSRN  146 (260)
T ss_pred             --------------------------CeecCCCCHHHeEECCC----------CcEEEeeccccee
Confidence                                      58999999999999753          3789999998764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.45  E-value=2.6e-13  Score=101.02  Aligned_cols=108  Identities=28%  Similarity=0.511  Sum_probs=88.4

Q ss_pred             HHHHHHHHHHHHhhc-CCcceEEEeeeeecCC------cEEEEEEEeCCCceeEEEee----ecCCCHHHHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTEL-HHENVVELLHCKESDQ------HVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLKQIVQ   76 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~------~~~lv~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~~~~   76 (160)
                      ....+.+|+++++++ +|||++++++.+....      ..++++|+++++++.+.+..    ...+++.....+..+++.
T Consensus        45 ~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~  124 (275)
T cd06608          45 EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLR  124 (275)
T ss_pred             hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHH
Confidence            446778899999998 6999999999887654      48999999999988765433    246788888889999999


Q ss_pred             HHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         77 ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        77 ~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      ++.++|..                                 +++|+|++|+||+++.+          ..++++|||+++
T Consensus       125 al~~lH~~---------------------------------~i~H~~l~p~ni~~~~~----------~~~~l~d~~~~~  161 (275)
T cd06608         125 GLAYLHEN---------------------------------KVIHRDIKGQNILLTKN----------AEVKLVDFGVSA  161 (275)
T ss_pred             HHHHHhcC---------------------------------CcccCCCCHHHEEEccC----------CeEEECCCccce
Confidence            99887642                                 68999999999999854          378999999886


Q ss_pred             cc
Q psy11428        157 FL  158 (160)
Q Consensus       157 ~~  158 (160)
                      ..
T Consensus       162 ~~  163 (275)
T cd06608         162 QL  163 (275)
T ss_pred             ec
Confidence            53

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.45  E-value=3.6e-13  Score=99.96  Aligned_cols=108  Identities=33%  Similarity=0.526  Sum_probs=92.0

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee---cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK---GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .......|+..++.++|||++++++.+......++++|+++++++..++...   +.+++.....+..+++.++..+|..
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~  121 (267)
T cd06610          42 SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN  121 (267)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            5667888999999999999999999999999999999999999988876543   3478888888999999999887642


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|++|+||+++.+          ..++++|||++..+
T Consensus       122 ---------------------------------~i~h~~l~p~ni~~~~~----------~~~~l~df~~~~~~  152 (267)
T cd06610         122 ---------------------------------GQIHRDIKAGNILLGED----------GSVKIADFGVSASL  152 (267)
T ss_pred             ---------------------------------CeecCCCCHHhEEEcCC----------CCEEEcccchHHHh
Confidence                                             68999999999999854          36899999987644

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.45  E-value=2.8e-13  Score=101.67  Aligned_cols=108  Identities=32%  Similarity=0.509  Sum_probs=90.8

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+..|+.+++.++|||++++++.+..+...++++|++ ++++..++.. ...+++.....+..+++.++.++|.. 
T Consensus        41 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~-  118 (286)
T cd07832          41 GIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN-  118 (286)
T ss_pred             hhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            34566788999999999999999999999999999999999 8998876543 34578888888999999999887742 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+||+++.+          ..++++|||+++..
T Consensus       119 --------------------------------~i~H~dl~p~ni~~~~~----------~~~~l~dfg~~~~~  149 (286)
T cd07832         119 --------------------------------GIMHRDLKPANLLISAD----------GVLKIADFGLARLF  149 (286)
T ss_pred             --------------------------------CeecCCcCHHHEEEcCC----------CcEEEeeeeecccc
Confidence                                            58999999999999854          37899999987643

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.45  E-value=2.4e-13  Score=103.45  Aligned_cols=106  Identities=28%  Similarity=0.422  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|+.+++.++||||+++++.+.. ...+++++++++|++.+++..+. .+++.....+..+++.++.++|..   
T Consensus        53 ~~~~~~e~~~~~~l~h~niv~~~~~~~~-~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---  128 (303)
T cd05110          53 NVEFMDEALIMASMDHPHLVRLLGVCLS-PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---  128 (303)
T ss_pred             HHHHHHHHHHHHhCCCCCcccEEEEEcC-CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---
Confidence            3457788999999999999999998765 45678999999999988765433 467778888889999999887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|+||+|++++.+          ..++++|||+++.+
T Consensus       129 ------------------------------~ivH~dikp~Nill~~~----------~~~kL~Dfg~~~~~  159 (303)
T cd05110         129 ------------------------------RLVHRDLAARNVLVKSP----------NHVKITDFGLARLL  159 (303)
T ss_pred             ------------------------------CeeccccccceeeecCC----------CceEEccccccccc
Confidence                                          68999999999999743          36899999998743

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.45  E-value=1.6e-13  Score=106.13  Aligned_cols=105  Identities=34%  Similarity=0.565  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecC------CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESD------QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~------~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ...+.+|+++++.++||||+++++++...      ...|++++++ ++++...+. .+.+++..+..+..+++.++.++|
T Consensus        58 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH  135 (343)
T cd07878          58 ARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIH  135 (343)
T ss_pred             HHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34566799999999999999998876532      4578999987 667765543 346888899999999999999887


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|||+||+||+++.+          ..++|+|||+++..
T Consensus       136 ~~---------------------------------~ivHrdikp~Nil~~~~----------~~~kl~Dfg~~~~~  168 (343)
T cd07878         136 SA---------------------------------GIIHRDLKPSNVAVNED----------CELRILDFGLARQA  168 (343)
T ss_pred             HC---------------------------------CeecccCChhhEEECCC----------CCEEEcCCccceec
Confidence            53                                 68999999999999854          37899999998754

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.45  E-value=2.2e-13  Score=104.99  Aligned_cols=104  Identities=34%  Similarity=0.482  Sum_probs=88.9

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      .+.+|+++++.++|||++++++++..++..++++|+++ +++..++.....+++.....+..+++.++.++|..      
T Consensus        66 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~------  138 (335)
T PTZ00024         66 TTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW------  138 (335)
T ss_pred             hHHHHHHHHHhCCCcceeeeeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC------
Confidence            35679999999999999999999999999999999997 57777666666788888999999999999988752      


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                 +++|+|++|+||+++.+          ..++++|||+++..
T Consensus       139 ---------------------------~i~H~dl~~~nill~~~----------~~~kl~dfg~~~~~  169 (335)
T PTZ00024        139 ---------------------------YFMHRDLSPANIFINSK----------GICKIADFGLARRY  169 (335)
T ss_pred             ---------------------------CeecccccHHHeEECCC----------CCEEECCccceeec
Confidence                                       68999999999999743          37899999988643

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.44  E-value=3.1e-13  Score=105.46  Aligned_cols=106  Identities=31%  Similarity=0.510  Sum_probs=82.7

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecC------CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESD------QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~------~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      .....+.+|+.+++.++||||+++++++...      ..+|+++||+++ ++...+.  ..++......+..+++.++.+
T Consensus        65 ~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~  141 (364)
T cd07875          65 THAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKH  141 (364)
T ss_pred             hhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEEEeCCCC-CHHHHHH--hcCCHHHHHHHHHHHHHHHHH
Confidence            3445677899999999999999999877543      357999999976 4433332  246677778888999999988


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..                                 +++|||+||+||+++.+          ..++|+|||+++..
T Consensus       142 LH~~---------------------------------~ivH~Dlkp~NIll~~~----------~~~kL~DfG~a~~~  176 (364)
T cd07875         142 LHSA---------------------------------GIIHRDLKPSNIVVKSD----------CTLKILDFGLARTA  176 (364)
T ss_pred             HhhC---------------------------------CeecCCCCHHHEEECCC----------CcEEEEeCCCcccc
Confidence            7742                                 68999999999999754          37999999998753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.44  E-value=2.8e-13  Score=102.67  Aligned_cols=106  Identities=29%  Similarity=0.492  Sum_probs=89.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+.+++.++|||++++++.+...+..|+++||++++++..++.. ..+++.....+..+++.++.++|..   
T Consensus        59 ~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~---  134 (293)
T cd06647          59 KKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSN---  134 (293)
T ss_pred             HHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            345677889999999999999999999999999999999999999887654 3467777888888999999887743   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|++|+|++++.+          ..++++|||++..
T Consensus       135 ------------------------------gi~H~dL~p~Nili~~~----------~~~kL~dfg~~~~  164 (293)
T cd06647         135 ------------------------------QVIHRDIKSDNILLGMD----------GSVKLTDFGFCAQ  164 (293)
T ss_pred             ------------------------------CEeeccCCHHHEEEcCC----------CCEEEccCcceec
Confidence                                          68999999999999743          3689999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>KOG0200|consensus

Probab=99.44  E-value=2.2e-13  Score=113.09  Aligned_cols=111  Identities=34%  Similarity=0.504  Sum_probs=95.3

Q ss_pred             chhHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----------------CCCHHHH
Q psy11428          5 SKSSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------------TLSEDTI   67 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~   67 (160)
                      +++.....+.|+.+++.+ +|||++.+.+++...+..+++.||+..|++..+++.++                .+....+
T Consensus       341 ~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dL  420 (609)
T KOG0200|consen  341 SSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDL  420 (609)
T ss_pred             CcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHH
Confidence            347788899999999998 59999999999999999999999999999999887655                3667788


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceE
Q psy11428         68 RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKL  147 (160)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~  147 (160)
                      ..+..|++.++.++...                                 +++|||+.++||+++.          +..+
T Consensus       421 lsfa~QIa~GMe~L~~~---------------------------------~~vHRDLAaRNVLi~~----------~~~~  457 (609)
T KOG0200|consen  421 LSFAYQIANGMEYLASV---------------------------------PCVHRDLAARNVLITK----------NKVI  457 (609)
T ss_pred             HHHHHHHHHHHHHHhhC---------------------------------CccchhhhhhhEEecC----------CCEE
Confidence            88999999988876542                                 5899999999999984          3589


Q ss_pred             EEeeeeccccc
Q psy11428        148 KIADFGFARFL  158 (160)
Q Consensus       148 ~l~dfg~a~~~  158 (160)
                      |++|||+||..
T Consensus       458 kIaDFGlar~~  468 (609)
T KOG0200|consen  458 KIADFGLARDH  468 (609)
T ss_pred             EEccccceecc
Confidence            99999999853

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.44  E-value=3e-13  Score=100.03  Aligned_cols=115  Identities=34%  Similarity=0.546  Sum_probs=89.5

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeee--cCCcEEEEEEEeCCCceeEEEee----ecCCCHHHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKE--SDQHVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~--~~~~~~lv~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ........+|+.+++.++|||++++++.+.  .+...|+++||++++++..++..    ...+++.....+..+++.++.
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~  119 (265)
T cd08217          40 EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALY  119 (265)
T ss_pred             HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHH
Confidence            444566778999999999999999998665  44668999999999998877643    245778888888999999998


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..-...                            .+++|+|++|+||+++.+          ..++++|||++..+
T Consensus       120 ~lH~~~~~~----------------------------~~i~h~dl~p~nili~~~----------~~~kl~d~g~~~~~  160 (265)
T cd08217         120 ECHNRSDPG----------------------------NTVLHRDLKPANIFLDAN----------NNVKLGDFGLAKIL  160 (265)
T ss_pred             HHhcCcccc----------------------------CcceecCCCHHHEEEecC----------CCEEEecccccccc
Confidence            876210000                            268999999999999843          37899999988754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.44  E-value=3.5e-13  Score=100.54  Aligned_cols=107  Identities=29%  Similarity=0.560  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHhhc-CCcceEEEeeeeecC------CcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHH
Q psy11428          9 IVLTRHILKELTEL-HHENVVELLHCKESD------QHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         9 ~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~------~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~   79 (160)
                      .....+|+.+++.+ +|||++++.+.+...      ...|+++|+++++++..++...  ..+++.....+..+++.++.
T Consensus        46 ~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~  125 (272)
T cd06637          46 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLS  125 (272)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHH
Confidence            34567888888888 699999999987642      4689999999999988776542  34678888888899999998


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       126 ~LH~~---------------------------------~ivh~dl~~~nili~~~----------~~~~l~Dfg~~~~~  161 (272)
T cd06637         126 HLHQH---------------------------------KVIHRDIKGQNVLLTEN----------AEVKLVDFGVSAQL  161 (272)
T ss_pred             HHHHC---------------------------------CCccCCCCHHHEEECCC----------CCEEEccCCCceec
Confidence            87753                                 58999999999999854          37899999998643

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.44  E-value=4.1e-13  Score=98.86  Aligned_cols=109  Identities=31%  Similarity=0.545  Sum_probs=92.5

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----cCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----GTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ........|+++++.++|||++++.+.+......++++|+++++++..++...    ..++......+..+++.++.++|
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh  120 (258)
T cd08215          41 KEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH  120 (258)
T ss_pred             HHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence            45556778999999999999999999999999999999999999988766542    56788888899999999998887


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|++|.||+++.+          ..++++|||++...
T Consensus       121 ~~---------------------------------~~~H~dl~~~nil~~~~----------~~~~l~d~~~~~~~  153 (258)
T cd08215         121 SR---------------------------------KILHRDIKPQNIFLTSN----------GLVKLGDFGISKVL  153 (258)
T ss_pred             hC---------------------------------CEecccCChHHeEEcCC----------CcEEECCccceeec
Confidence            53                                 68999999999999843          37899999988653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.44  E-value=3.4e-13  Score=101.23  Aligned_cols=105  Identities=34%  Similarity=0.606  Sum_probs=86.5

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee---cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK---GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ...+.+|+++++.++|||++++++++.+.+..++++|++++ ++..++...   ..+++.....+..+++.++.++|.. 
T Consensus        42 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-  119 (284)
T cd07836          42 PSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN-  119 (284)
T ss_pred             hHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC-
Confidence            44566799999999999999999999999999999999985 665544332   3468888888999999999887642 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       120 --------------------------------~i~h~dl~p~ni~~~~~----------~~~~l~d~g~~~~  149 (284)
T cd07836         120 --------------------------------RVLHRDLKPQNLLINKR----------GELKLADFGLARA  149 (284)
T ss_pred             --------------------------------CeeeCCCCHHHEEECCC----------CcEEEeecchhhh
Confidence                                            58999999999999744          3789999998864

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG0607|consensus

Probab=99.44  E-value=7e-14  Score=105.61  Aligned_cols=106  Identities=30%  Similarity=0.464  Sum_probs=90.2

Q ss_pred             HHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         11 LTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        11 ~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      +.-.|++++.+++ |+||+.|++.|++....|+|||.+.||.+...+..+..+.+.+.....+.+..++..+|..     
T Consensus       121 RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k-----  195 (463)
T KOG0607|consen  121 RVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTK-----  195 (463)
T ss_pred             HHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc-----
Confidence            3345777777774 9999999999999999999999999999998888888899999999999999999887653     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                  +|.|||+||+|||..+..       .-..+||+||-++.
T Consensus       196 ----------------------------gIAHRDlKPENiLC~~pn-------~vsPvKiCDfDLgS  227 (463)
T KOG0607|consen  196 ----------------------------GIAHRDLKPENILCESPN-------KVSPVKICDFDLGS  227 (463)
T ss_pred             ----------------------------CcccccCCccceeecCCC-------CcCceeeecccccc
Confidence                                        789999999999998532       34468999997764

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.44  E-value=8.1e-13  Score=101.23  Aligned_cols=107  Identities=32%  Similarity=0.477  Sum_probs=86.4

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe-eecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+.+|++.++.++|||++++++++.+....++++||+++ ++.+.+. ....+++.....+..+++.++.++|.. 
T Consensus        67 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~-  144 (317)
T cd06635          67 EKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH-  144 (317)
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3445677899999999999999999999999999999999975 4444332 234577788888888999999887743 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++|+|++|+|++++.+          ..++++|||++..
T Consensus       145 --------------------------------~i~H~dL~p~Nil~~~~----------~~~kl~dfg~~~~  174 (317)
T cd06635         145 --------------------------------NMIHRDIKAGNILLTEP----------GQVKLADFGSASI  174 (317)
T ss_pred             --------------------------------CcccCCCCcccEEECCC----------CCEEEecCCCccc
Confidence                                            68999999999999743          3789999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.44  E-value=3.1e-13  Score=103.96  Aligned_cols=106  Identities=15%  Similarity=0.222  Sum_probs=88.3

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ...+..++.|..+++.++||||+++++++..++..|+++|++.++++..++...  ..+++.....+..+++.++.++|.
T Consensus        40 ~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~  119 (328)
T cd08226          40 EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQ  119 (328)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            345677888999999999999999999999999999999999999987765543  246788888889999999998874


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeec
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGF  154 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~  154 (160)
                      .                                 +++|||+||+||+++.+          ..++++||+.
T Consensus       120 ~---------------------------------~ivHrDlkp~Nill~~~----------~~~~~~~~~~  147 (328)
T cd08226         120 N---------------------------------GYIHRNIKASHILISGD----------GLVSLSGLSH  147 (328)
T ss_pred             C---------------------------------CeecCCCCHHHEEEeCC----------CcEEEechHH
Confidence            2                                 68999999999999743          3678888864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.43  E-value=1.1e-13  Score=103.46  Aligned_cols=109  Identities=34%  Similarity=0.642  Sum_probs=93.7

Q ss_pred             hHHHHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ........|..+++.++ ||||+++++.+...+..++++|+++++++..++...+.++......+..+++.++.++|.. 
T Consensus        43 ~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~-  121 (280)
T cd05581          43 KKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK-  121 (280)
T ss_pred             HHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            34456777888899998 9999999999999999999999999999988877766789999999999999999887642 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+|++++.+          +.++++|||++..+
T Consensus       122 --------------------------------~~~H~dl~~~ni~i~~~----------~~~~l~df~~~~~~  152 (280)
T cd05581         122 --------------------------------GIIHRDLKPENILLDKD----------MHIKITDFGTAKVL  152 (280)
T ss_pred             --------------------------------CeeecCCCHHHeEECCC----------CCEEecCCcccccc
Confidence                                            58999999999999743          37899999988644

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.43  E-value=3.9e-13  Score=101.98  Aligned_cols=107  Identities=30%  Similarity=0.548  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+..++.++|||++++++.+..++..++++||++++++..++. .+.+++.....+..+++.++.++|..   
T Consensus        60 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~---  135 (292)
T cd06657          60 RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQ---  135 (292)
T ss_pred             HHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            44567788999999999999999999999999999999999999877653 34577888888899999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.+          ..++++|||++..+
T Consensus       136 ------------------------------givH~dl~p~Nilv~~~----------~~~~l~dfg~~~~~  166 (292)
T cd06657         136 ------------------------------GVIHRDIKSDSILLTHD----------GRVKLSDFGFCAQV  166 (292)
T ss_pred             ------------------------------CeecCCCCHHHEEECCC----------CCEEEcccccceec
Confidence                                          68999999999999754          36899999987543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.43  E-value=4.1e-13  Score=101.06  Aligned_cols=102  Identities=37%  Similarity=0.618  Sum_probs=77.4

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeec-----CCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428         13 RHILKELTELHHENVVELLHCKES-----DQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~-----~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ..+++.++.++||||+++++++..     ....++++|++++ ++..++...  ..+++..+..++.+++.++.++|.. 
T Consensus        50 ~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-  127 (288)
T cd07863          50 VALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN-  127 (288)
T ss_pred             HHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            333444455589999999997754     3458999999975 555544332  3478888899999999999988753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|+||+|++++.+          +.++|+|||+++.+
T Consensus       128 --------------------------------~ivH~dikp~Nili~~~----------~~~kl~dfg~~~~~  158 (288)
T cd07863         128 --------------------------------CIVHRDLKPENILVTSG----------GQVKLADFGLARIY  158 (288)
T ss_pred             --------------------------------CeecCCCCHHHEEECCC----------CCEEECccCccccc
Confidence                                            68999999999999754          37899999998654

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>PRK10345 hypothetical protein; Provisional

Probab=99.43  E-value=4.5e-13  Score=97.44  Aligned_cols=107  Identities=26%  Similarity=0.332  Sum_probs=76.4

Q ss_pred             HHHHHHHHHHHhhc-----CCcceEEEeeeeecCC---cEE-EEEEE--eCCCceeEEEeeecCCCHHHHHHHHHHHHHH
Q psy11428          9 IVLTRHILKELTEL-----HHENVVELLHCKESDQ---HVY-LVMEF--CNGGDLADYLVSKGTLSEDTIRIFLKQIVQA   77 (160)
Q Consensus         9 ~~~~~~~~~~l~~l-----~h~~iv~l~~~~~~~~---~~~-lv~e~--~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~   77 (160)
                      ....+.|+++++.+     .||||+++++.++++.   .++ +++||  +.+++|.+++.. +.+++.  ...+.+++.+
T Consensus        40 ~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~  116 (210)
T PRK10345         40 DKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKK  116 (210)
T ss_pred             HHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHH
Confidence            45678899999998     6799999999998763   444 78999  447899888754 345444  2334555555


Q ss_pred             H-HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEee-eecc
Q psy11428         78 L-KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIAD-FGFA  155 (160)
Q Consensus        78 ~-~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~d-fg~a  155 (160)
                      + .++|..                                 +++|||+||+||+++.++      +....++|+| ||..
T Consensus       117 l~~yLh~~---------------------------------~IvhrDlKp~NILl~~~~------~~~~~~~LiDg~G~~  157 (210)
T PRK10345        117 LKRYLLDN---------------------------------RIVTMELKPQNILCQRIS------ESEVIPVVCDNIGES  157 (210)
T ss_pred             HHHHHHHC---------------------------------CEeecCCCHHHEEEeccC------CCCCcEEEEECCCCc
Confidence            5 565532                                 689999999999998542      1334789999 5655


Q ss_pred             cc
Q psy11428        156 RF  157 (160)
Q Consensus       156 ~~  157 (160)
                      .+
T Consensus       158 ~~  159 (210)
T PRK10345        158 TF  159 (210)
T ss_pred             ce
Confidence            54

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.43  E-value=1e-12  Score=99.34  Aligned_cols=106  Identities=34%  Similarity=0.530  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ...+.+|+++++.++|||++++++++..+...|+++||+++ ++...+....  ...+..+..+..+++.++.++|..  
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~--  121 (294)
T PLN00009         45 PSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH--  121 (294)
T ss_pred             hHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC--
Confidence            34577899999999999999999999999999999999964 5544433222  245667777888999999887743  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++|+|++|+|++++.++         ..++++|||+++.
T Consensus       122 -------------------------------~i~H~dl~p~nill~~~~---------~~~kl~dfg~~~~  152 (294)
T PLN00009        122 -------------------------------RVLHRDLKPQNLLIDRRT---------NALKLADFGLARA  152 (294)
T ss_pred             -------------------------------CeeCCCCCcceEEEECCC---------CEEEEcccccccc
Confidence                                           579999999999997432         3689999998864

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.43  E-value=3.9e-13  Score=101.82  Aligned_cols=106  Identities=38%  Similarity=0.575  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCC----------cEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHH
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQ----------HVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQA   77 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~----------~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~   77 (160)
                      ...+.+|++.++.++|||++++++.+.+..          ..|+++|++++ ++...+.. ...+++.....+..+++.+
T Consensus        50 ~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~a  128 (302)
T cd07864          50 PITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEG  128 (302)
T ss_pred             hHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHH
Confidence            345678999999999999999998876554          78999999987 44333332 3457888888999999999


Q ss_pred             HHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         78 LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        78 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +.++|..                                 +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       129 L~~LH~~---------------------------------~i~H~dl~p~nili~~~----------~~~kl~dfg~~~~  165 (302)
T cd07864         129 LNYCHKK---------------------------------NFLHRDIKCSNILLNNK----------GQIKLADFGLARL  165 (302)
T ss_pred             HHHHHhC---------------------------------CeecCCCCHHHEEECCC----------CcEEeCccccccc
Confidence            9887642                                 68999999999999744          4789999999875


Q ss_pred             c
Q psy11428        158 L  158 (160)
Q Consensus       158 ~  158 (160)
                      +
T Consensus       166 ~  166 (302)
T cd07864         166 Y  166 (302)
T ss_pred             c
Confidence            4

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>KOG0574|consensus

Probab=99.43  E-value=4.4e-14  Score=106.10  Aligned_cols=109  Identities=28%  Similarity=0.456  Sum_probs=91.1

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      +.-.-.|+.++.++..|.+|++++++-....+|+|||||..|++.+-++. ++.+++.++.-+.+.-++++.++|-    
T Consensus        72 LQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~----  147 (502)
T KOG0574|consen   72 LQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHD----  147 (502)
T ss_pred             HHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHH----
Confidence            33445688899999999999999999999999999999999999886653 4567888888888888888888774    


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccCC
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD  160 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~~  160 (160)
                                                   ...||||+|+.|||++..+          ..|++|||.|..++|
T Consensus       148 -----------------------------~~KIHRDIKAGNILLNT~G----------~AKLADFGVAGQLTD  181 (502)
T KOG0574|consen  148 -----------------------------LKKIHRDIKAGNILLNTDG----------IAKLADFGVAGQLTD  181 (502)
T ss_pred             -----------------------------HHHHHhhcccccEEEcccc----------hhhhhhccccchhhh
Confidence                                         2469999999999998543          789999999987764

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.42  E-value=6.2e-13  Score=98.75  Aligned_cols=106  Identities=28%  Similarity=0.473  Sum_probs=86.3

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ...+..|+.+++.++|||++++++.+. .+..++++|+++++++..++...  ..++......+..+++.++.++|..  
T Consensus        45 ~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~--  121 (260)
T cd05067          45 PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK--  121 (260)
T ss_pred             HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC--
Confidence            456778999999999999999998764 56789999999999998765432  3467777888888999999887642  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       122 -------------------------------~i~H~dl~p~ni~i~~~----------~~~~l~dfg~~~~~  152 (260)
T cd05067         122 -------------------------------NYIHRDLRAANILVSET----------LCCKIADFGLARLI  152 (260)
T ss_pred             -------------------------------CeecccccHHhEEEcCC----------CCEEEccCcceeec
Confidence                                           58999999999999854          37899999998644

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.42  E-value=9.3e-13  Score=99.41  Aligned_cols=106  Identities=31%  Similarity=0.484  Sum_probs=85.0

Q ss_pred             HHHHHHHHHHhhc-CCcceEEEeeeeecC-----CcEEEEEEEeCCCceeEEEe----eecCCCHHHHHHHHHHHHHHHH
Q psy11428         10 VLTRHILKELTEL-HHENVVELLHCKESD-----QHVYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus        10 ~~~~~~~~~l~~l-~h~~iv~l~~~~~~~-----~~~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ....+|+.+++.+ +|||++++++.+...     +..|+++||++++++...+.    ....+++.....+..+++.++.
T Consensus        63 ~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~  142 (291)
T cd06639          63 EEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQ  142 (291)
T ss_pred             HHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Confidence            4556788888888 799999999987643     35899999999999876543    2345788888889999999998


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       143 ~lH~~---------------------------------~ivH~dlkp~nili~~~----------~~~kl~dfg~~~~~  178 (291)
T cd06639         143 HLHNN---------------------------------RIIHRDVKGNNILLTTE----------GGVKLVDFGVSAQL  178 (291)
T ss_pred             HHHhC---------------------------------CeeccCCCHHHEEEcCC----------CCEEEeecccchhc
Confidence            87742                                 68999999999999754          36899999988643

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.42  E-value=3.1e-13  Score=99.86  Aligned_cols=110  Identities=34%  Similarity=0.578  Sum_probs=90.5

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .....+.+|+.+++.++|||++++++.+...+..++++||++++++..++....  .+++.....+..+++.++.++|..
T Consensus        41 ~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~  120 (257)
T cd08225          41 KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR  120 (257)
T ss_pred             hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            345567789999999999999999999999999999999999999987765432  357788888888999999887642


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|++|.||+++.++         ..++++|||.+..+
T Consensus       121 ---------------------------------~i~H~dl~~~nil~~~~~---------~~~~l~d~~~~~~~  152 (257)
T cd08225         121 ---------------------------------KILHRDIKSQNIFLSKNG---------MVAKLGDFGIARQL  152 (257)
T ss_pred             ---------------------------------CcccccCCHHHEEEcCCC---------CeEEecccccchhc
Confidence                                             589999999999997532         25699999987643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.42  E-value=9.4e-13  Score=99.36  Aligned_cols=107  Identities=23%  Similarity=0.423  Sum_probs=86.6

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEe----eecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      ....+.+|+++++.++||||+++++.+...  +..|+++||+++++|.+++.    ....+++.....+..+++.++.++
T Consensus        42 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l  121 (287)
T cd06621          42 LQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL  121 (287)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence            445677899999999999999999987543  46899999999999866432    234467778888999999999988


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      |..                                 +++|+|++|.|++++.+          ..++++|||++..
T Consensus       122 H~~---------------------------------~i~H~dl~~~nil~~~~----------~~~~l~dfg~~~~  154 (287)
T cd06621         122 HSR---------------------------------KIIHRDIKPSNILLTRK----------GQVKLCDFGVSGE  154 (287)
T ss_pred             HHC---------------------------------CcccCCCCHHHEEEecC----------CeEEEeecccccc
Confidence            752                                 68999999999999754          3689999998764

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.42  E-value=7.6e-13  Score=100.74  Aligned_cols=110  Identities=29%  Similarity=0.470  Sum_probs=86.9

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEe-----eecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLV-----SKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      .....+|+.+++.++||||+++++.+.++  ...|+++|++++. +...+.     ....+++..+..+..+++.++.++
T Consensus        46 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~l  124 (316)
T cd07842          46 SQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDYAEHD-LWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYL  124 (316)
T ss_pred             cHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeCCCcC-HHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHH
Confidence            35567799999999999999999999888  8899999998763 333221     123578888888999999999987


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                 +++|+|++|+|++++.++      +.++.++++|||+++.+
T Consensus       125 H~~---------------------------------~i~h~dlkp~Nil~~~~~------~~~~~~kl~Dfg~~~~~  162 (316)
T cd07842         125 HSN---------------------------------WVLHRDLKPANILVMGEG------PERGVVKIGDLGLARLF  162 (316)
T ss_pred             HhC---------------------------------CEeeCCCCHHHEEEcCCC------CccceEEECCCcccccc
Confidence            742                                 589999999999998521      23568999999998754

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.42  E-value=9.7e-13  Score=98.08  Aligned_cols=111  Identities=32%  Similarity=0.498  Sum_probs=87.8

Q ss_pred             hhHHHHHHHHHHHHhh-cCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe----eecCCCHHHHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTE-LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~-l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      ...+....+|+.++.+ ++|||++++++.+.+.+..++++||++++++.+.+.    ....+++.....++.+++.++.+
T Consensus        49 ~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~  128 (269)
T cd08528          49 DKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRY  128 (269)
T ss_pred             hHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence            3345556778887764 799999999999999999999999999998876542    22457788888888899998887


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..                                .+++|+|++|+||+++.+          ..++++|||++...
T Consensus       129 lh~~--------------------------------~~i~H~dl~~~nil~~~~----------~~~~l~dfg~~~~~  164 (269)
T cd08528         129 LHKE--------------------------------KRIVHRDLTPNNIMLGED----------DKVTITDFGLAKQK  164 (269)
T ss_pred             hccC--------------------------------CceeecCCCHHHEEECCC----------CcEEEecccceeec
Confidence            6521                                157999999999999754          37899999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG0201|consensus

Probab=99.42  E-value=2.1e-14  Score=111.61  Aligned_cols=112  Identities=30%  Similarity=0.525  Sum_probs=97.5

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .+..|...++|+.+|.+++++||.++++++..+..++++|||+.||.+.+.+.....+.+......+.++..++.++|..
T Consensus        51 ~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~  130 (467)
T KOG0201|consen   51 AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE  130 (467)
T ss_pred             cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhc
Confidence            45678889999999999999999999999999999999999999999999887766667777777788888888877653


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                       +.+|||+|+.|+++...          +.+|+.|||.+.+++
T Consensus       131 ---------------------------------~kiHrDIKaanil~s~~----------g~vkl~DfgVa~ql~  162 (467)
T KOG0201|consen  131 ---------------------------------KKIHRDIKAANILLSES----------GDVKLADFGVAGQLT  162 (467)
T ss_pred             ---------------------------------ceecccccccceeEecc----------CcEEEEecceeeeee
Confidence                                             57999999999999855          379999999997765

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.42  E-value=8e-13  Score=94.81  Aligned_cols=99  Identities=26%  Similarity=0.272  Sum_probs=72.7

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh-hhhhcCCCce
Q psy11428         13 RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF-QVKELHHENV   91 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~h~ni   91 (160)
                      ..|.+.++.+.++++..... ... ...+++|||++|+++.......+.++......+..+++.++.++ |.        
T Consensus        67 ~~E~~~l~~l~~~~v~~p~~-~~~-~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~--------  136 (190)
T cd05147          67 EKEMRNLKRLVTAGIPCPEP-ILL-KSHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQD--------  136 (190)
T ss_pred             HHHHHHHHHHHHCCCCCCcE-EEe-cCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHh--------
Confidence            45888888888777643222 222 22389999999987765433345678888888888898888875 33        


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                               .+++|||+||+|++++.           ..++++|||+|..
T Consensus       137 -------------------------~giiHrDlkP~NIli~~-----------~~v~LiDFG~a~~  166 (190)
T cd05147         137 -------------------------CRLVHADLSEYNLLYHD-----------GKLYIIDVSQSVE  166 (190)
T ss_pred             -------------------------CCcccCCCCHHHEEEEC-----------CcEEEEEcccccc
Confidence                                     26899999999999972           2589999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.42  E-value=1.1e-12  Score=93.87  Aligned_cols=104  Identities=24%  Similarity=0.221  Sum_probs=75.2

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      ..+.|.+.+.++.++++.........  ..|++|||++|+++.........++......+..+++.++.++|..      
T Consensus        65 ~~~~E~~~l~~l~~~~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~------  136 (190)
T cd05145          65 WAEKEFRNLKRLYEAGVPVPEPILLK--KNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQE------  136 (190)
T ss_pred             HHHHHHHHHHHHHhCCCCCceEEEec--CCEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHh------
Confidence            34678888999999987443322222  2489999999885543322344566777778888899988877641      


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                .+++|||+||+|++++ +          ..++++|||+++.+.
T Consensus       137 --------------------------~givHrDlkP~NIll~-~----------~~~~liDFG~a~~~~  168 (190)
T cd05145         137 --------------------------AGLVHGDLSEYNILYH-D----------GKPYIIDVSQAVELD  168 (190)
T ss_pred             --------------------------CCEecCCCChhhEEEE-C----------CCEEEEEcccceecC
Confidence                                      1689999999999997 2          268999999997654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0669|consensus

Probab=99.42  E-value=5.1e-14  Score=103.40  Aligned_cols=103  Identities=37%  Similarity=0.581  Sum_probs=81.7

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeee--------cCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428         12 TRHILKELTELHHENVVELLHCKE--------SDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~--------~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      +-.|+++|..|.|+|++.+++.|.        +....|+|++++.. +|+-.+.. +..++..++..+++++.+++.+.|
T Consensus        63 alreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH  141 (376)
T KOG0669|consen   63 ALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH  141 (376)
T ss_pred             HHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHH
Confidence            345899999999999999877553        34468999999865 55444433 356888999999999999999887


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|||+||+|+|++.+          +.++++|||++|.+
T Consensus       142 r~---------------------------------kilHRDmKaaNvLIt~d----------gilklADFGlar~f  174 (376)
T KOG0669|consen  142 RN---------------------------------KILHRDMKAANVLITKD----------GILKLADFGLARAF  174 (376)
T ss_pred             Hh---------------------------------hHHhhcccHhhEEEcCC----------ceEEeeccccccce
Confidence            53                                 68999999999999844          48999999999643

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.41  E-value=8.3e-13  Score=98.56  Aligned_cols=110  Identities=25%  Similarity=0.429  Sum_probs=85.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCC------cEEEEEEEeCCCceeEEEee------ecCCCHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQ------HVYLVMEFCNGGDLADYLVS------KGTLSEDTIRIFLKQ   73 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~------~~~lv~e~~~~g~l~~~l~~------~~~~~~~~~~~~~~~   73 (160)
                      ......+.+|+++++.++|||++++++.+....      ..++++++..++++..++..      ...++......+..+
T Consensus        42 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~  121 (273)
T cd05074          42 SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMID  121 (273)
T ss_pred             hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHH
Confidence            345667888999999999999999999765432      34788999999988654321      123577778888999


Q ss_pred             HHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeee
Q psy11428         74 IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG  153 (160)
Q Consensus        74 ~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg  153 (160)
                      ++.++.++|..                                 +++|+|+||+|++++.+          ..++++|||
T Consensus       122 i~~~l~~lH~~---------------------------------~i~H~dikp~nili~~~----------~~~kl~dfg  158 (273)
T cd05074         122 IASGMEYLSSK---------------------------------NFIHRDLAARNCMLNEN----------MTVCVADFG  158 (273)
T ss_pred             HHHHHHHHHhC---------------------------------CEeecccchhhEEEcCC----------CCEEECccc
Confidence            99999887743                                 58999999999999744          378999999


Q ss_pred             ccccc
Q psy11428        154 FARFL  158 (160)
Q Consensus       154 ~a~~~  158 (160)
                      +++.+
T Consensus       159 ~~~~~  163 (273)
T cd05074         159 LSKKI  163 (273)
T ss_pred             ccccc
Confidence            98643

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.41  E-value=3.2e-13  Score=101.40  Aligned_cols=104  Identities=36%  Similarity=0.593  Sum_probs=86.0

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+.+|+++++.++||||+++++++.+....++++||++ +++..++..  .+.+++.....+..+++.++.++|..   
T Consensus        44 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---  119 (284)
T cd07860          44 STAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---  119 (284)
T ss_pred             hHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            467789999999999999999999999999999999996 456554432  24567888888999999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       120 ------------------------------~i~H~~l~p~nill~~~----------~~~~l~dfg~~~~  149 (284)
T cd07860         120 ------------------------------RVLHRDLKPQNLLINTE----------GAIKLADFGLARA  149 (284)
T ss_pred             ------------------------------CeecCCCCHHHEEECCC----------CCEEEeeccchhh
Confidence                                          57999999999999854          3789999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.41  E-value=6.1e-13  Score=99.61  Aligned_cols=94  Identities=27%  Similarity=0.540  Sum_probs=82.0

Q ss_pred             CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC
Q psy11428         23 HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ  102 (160)
Q Consensus        23 ~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~  102 (160)
                      +|||++++++++..++..|+++||+++++|..++...+.+++.....+..+++.++.++|..                  
T Consensus        67 ~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~------------------  128 (267)
T PHA03390         67 DNPNFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKH------------------  128 (267)
T ss_pred             cCCCEEEEEEEEecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC------------------
Confidence            69999999999999999999999999999988876666789999999999999999988753                  


Q ss_pred             eeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428        103 HVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus       103 ~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                     +++|+|++|+|++++.++         ..++++|||+++..
T Consensus       129 ---------------~i~H~dl~p~nil~~~~~---------~~~~l~dfg~~~~~  160 (267)
T PHA03390        129 ---------------NIIHNDIKLENVLYDRAK---------DRIYLCDYGLCKII  160 (267)
T ss_pred             ---------------CeeeCCCCHHHEEEeCCC---------CeEEEecCccceec
Confidence                           589999999999998542         26899999988643

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.41  E-value=4.1e-13  Score=99.03  Aligned_cols=109  Identities=27%  Similarity=0.436  Sum_probs=90.1

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee----ecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      .....+.+|+++++.++||||+++.+++......++++|+++++++..++..    ...+++.....+..+++.++.++|
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh  120 (256)
T cd08530          41 KEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH  120 (256)
T ss_pred             HHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence            3455667889999999999999999999999999999999999998876543    245677778888889999988876


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|++|.|++++.+          ..++++|||++...
T Consensus       121 ~~---------------------------------~i~h~~l~~~ni~~~~~----------~~~kl~d~g~~~~~  153 (256)
T cd08530         121 EQ---------------------------------KILHRDLKSANILLVAN----------DLVKIGDLGISKVL  153 (256)
T ss_pred             hC---------------------------------CcccCCCCcceEEEecC----------CcEEEeeccchhhh
Confidence            42                                 57999999999999853          36899999988654

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.40  E-value=1.1e-12  Score=100.21  Aligned_cols=107  Identities=31%  Similarity=0.466  Sum_probs=86.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe-eecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|+++++.++|||++++.+++......++++||+.+ ++...+. ....+++.....++.+++.++.++|..  
T Consensus        58 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~--  134 (308)
T cd06634          58 KWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH--  134 (308)
T ss_pred             HHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            345667899999999999999999999999999999999975 5544332 234577788888888999999887742  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+|++++.+          ..++++|||++..+
T Consensus       135 -------------------------------~i~H~dl~p~nil~~~~----------~~~kl~dfg~~~~~  165 (308)
T cd06634         135 -------------------------------NMIHRDVKAGNILLSEP----------GLVKLGDFGSASIM  165 (308)
T ss_pred             -------------------------------CcccCCCCHHhEEECCC----------CcEEECCcccceee
Confidence                                           58999999999999743          37899999987643

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>KOG0199|consensus

Probab=99.40  E-value=1.5e-13  Score=112.53  Aligned_cols=108  Identities=30%  Similarity=0.406  Sum_probs=92.2

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....|.+|..++.+|+|||+++|+++..+ ..+.+|+|+++.|+|.+.+++  +..+.-..+..+..|+..++.++... 
T Consensus       154 ~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk-  231 (1039)
T KOG0199|consen  154 IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK-  231 (1039)
T ss_pred             hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh-
Confidence            45678899999999999999999999987 778999999999999888765  34566778888999999999987653 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      ++||||+.++|+++...          ..+||+|||+.|-|.
T Consensus       232 --------------------------------rlvHRDLAARNlllasp----------rtVKI~DFGLmRaLg  263 (1039)
T KOG0199|consen  232 --------------------------------RLVHRDLAARNLLLASP----------RTVKICDFGLMRALG  263 (1039)
T ss_pred             --------------------------------hhhhhhhhhhhheeccc----------ceeeeecccceeccC
Confidence                                            57999999999999742          379999999998664

>KOG0614|consensus

Probab=99.40  E-value=3.2e-14  Score=112.76  Aligned_cols=99  Identities=33%  Similarity=0.591  Sum_probs=88.6

Q ss_pred             HHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeee
Q psy11428         18 ELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHC   97 (160)
Q Consensus        18 ~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~   97 (160)
                      ++-.++.|.||+++..|.++..+|++||-|-||.+-..++.++.+.+.+.+.+..-++++..++|..             
T Consensus       473 Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k-------------  539 (732)
T KOG0614|consen  473 IMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK-------------  539 (732)
T ss_pred             HHHhcCchHHHHHHHHhccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc-------------
Confidence            4556789999999999999999999999999999998899999999999999999899998887753             


Q ss_pred             eecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         98 KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        98 ~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                          ++|+||+||+|++++.+          +.+|+.|||+|+++.
T Consensus       540 --------------------~iIYRDLKPENllLd~~----------Gy~KLVDFGFAKki~  571 (732)
T KOG0614|consen  540 --------------------GIIYRDLKPENLLLDNR----------GYLKLVDFGFAKKIG  571 (732)
T ss_pred             --------------------CceeccCChhheeeccC----------CceEEeehhhHHHhc
Confidence                                68999999999999854          489999999998764

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.40  E-value=9.9e-13  Score=98.54  Aligned_cols=106  Identities=34%  Similarity=0.546  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ...+.+|+++++.++|||++++++.+...  +..+++++|+++ ++...+... ..+++.....+..+++.++.++|.. 
T Consensus        42 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~-  119 (287)
T cd07840          42 PITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN-  119 (287)
T ss_pred             hHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            34567899999999999999999999887  899999999975 666555443 4678888888999999999887742 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+|++++.+          +.++++|||++...
T Consensus       120 --------------------------------~~~h~dl~p~nil~~~~----------~~~~l~d~g~~~~~  150 (287)
T cd07840         120 --------------------------------GILHRDIKGSNILINND----------GVLKLADFGLARPY  150 (287)
T ss_pred             --------------------------------CceeccCcHHHeEEcCC----------CCEEEccccceeec
Confidence                                            57999999999999854          37899999988644

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.40  E-value=2.8e-13  Score=104.49  Aligned_cols=107  Identities=36%  Similarity=0.577  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeee----cCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKE----SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~----~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ....+..|+.+++.++||||+++++++.    .....|+++||+. +++...+...+.+++.....+..+++.++.++|.
T Consensus        47 ~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~  125 (334)
T cd07855          47 LAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHS  125 (334)
T ss_pred             chHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3455667999999999999999988765    3356899999996 5777776666678899999999999999988774


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|+||+|++++.+          +.++++|||+++..
T Consensus       126 ~---------------------------------~ivH~dlkp~Nil~~~~----------~~~kl~dfg~~~~~  157 (334)
T cd07855         126 A---------------------------------NVIHRDLKPSNLLVNED----------CELRIGDFGMARGL  157 (334)
T ss_pred             C---------------------------------CeecCCCCHHHEEEcCC----------CcEEecccccceee
Confidence            3                                 58999999999999854          37899999998643

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0577|consensus

Probab=99.40  E-value=5.4e-14  Score=113.36  Aligned_cols=106  Identities=33%  Similarity=0.463  Sum_probs=87.1

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe-eecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ..--..-.|++.|+.++|||.+.+.+||.-....|+|||||-|. -.+.+. .++++.+..+..+..+.+.+++++|+. 
T Consensus        68 EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYClGS-AsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~-  145 (948)
T KOG0577|consen   68 EKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH-  145 (948)
T ss_pred             HHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHhcc-HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh-
Confidence            33445566888899999999999999999999999999999764 333322 346788888988999999999998864 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                      ..||||||+.|||++..          +.+|++|||.|.
T Consensus       146 --------------------------------~~IHRDiKAGNILLse~----------g~VKLaDFGSAs  174 (948)
T KOG0577|consen  146 --------------------------------NRIHRDIKAGNILLSEP----------GLVKLADFGSAS  174 (948)
T ss_pred             --------------------------------hHHhhhccccceEecCC----------Ceeeeccccchh
Confidence                                            46999999999999854          489999999885

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.40  E-value=1.9e-12  Score=99.11  Aligned_cols=106  Identities=33%  Similarity=0.479  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe-eecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+..|+++++.++|||++++.+++.+....|+++||+.+ ++...+. ....+++.....+..+++.++.++|..  
T Consensus        64 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~--  140 (313)
T cd06633          64 KWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH--  140 (313)
T ss_pred             HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            445667799999999999999999999999999999999975 4433332 234577888888889999999887742  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++|+|++|+|++++.+          ..++++|||++..
T Consensus       141 -------------------------------gi~H~dl~p~nili~~~----------~~~kL~dfg~~~~  170 (313)
T cd06633         141 -------------------------------NMIHRDIKAGNILLTEP----------GQVKLADFGSASK  170 (313)
T ss_pred             -------------------------------CeecCCCChhhEEECCC----------CCEEEeecCCCcc
Confidence                                           68999999999999743          3689999998753

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0596|consensus

Probab=99.39  E-value=1.8e-12  Score=103.72  Aligned_cols=111  Identities=32%  Similarity=0.528  Sum_probs=93.2

Q ss_pred             cchhHHHHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecC-CCHHHHHHHHHHHHHHHHHh
Q psy11428          4 QSKSSIVLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         4 ~~~~~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~   81 (160)
                      .++..+.-+.+|+..|.+|+ |.+|++|++.....+.+|+||| ++..||...+..++. .+...++.+..+++.++...
T Consensus       398 ~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE-~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~I  476 (677)
T KOG0596|consen  398 ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME-CGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTI  476 (677)
T ss_pred             cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee-cccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHH
Confidence            45667888999999999995 8999999999999999999999 557788888766544 45567888999999999888


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                      |..                                 ++||.|+||+|.++-+           +.+||+|||+|.-++
T Consensus       477 H~~---------------------------------gIVHSDLKPANFLlVk-----------G~LKLIDFGIA~aI~  510 (677)
T KOG0596|consen  477 HQH---------------------------------GIVHSDLKPANFLLVK-----------GRLKLIDFGIANAIQ  510 (677)
T ss_pred             HHh---------------------------------ceeecCCCcccEEEEe-----------eeEEeeeechhcccC
Confidence            753                                 7999999999999963           478999999997654

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.38  E-value=5.1e-13  Score=99.14  Aligned_cols=108  Identities=31%  Similarity=0.525  Sum_probs=88.6

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe----eecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      .....+..|..+++.++|||++++++.+.++...++++||++++++...+.    ....+++.....+..+++.++.++|
T Consensus        44 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH  123 (260)
T cd08222          44 NETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH  123 (260)
T ss_pred             chHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH
Confidence            344566778899999999999999999998999999999999999876543    2345778888888999999998876


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|++|+|++++.+           .++++|||+++.+
T Consensus       124 ~~---------------------------------~i~h~~l~~~nili~~~-----------~~~l~d~g~~~~~  155 (260)
T cd08222         124 QR---------------------------------RILHRDLKAKNIFLKNN-----------LLKIGDFGVSRLL  155 (260)
T ss_pred             Hc---------------------------------CccccCCChhheEeecC-----------CEeecccCceeec
Confidence            42                                 68999999999999632           4899999988643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.38  E-value=1.3e-12  Score=101.63  Aligned_cols=105  Identities=32%  Similarity=0.521  Sum_probs=82.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecC------CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESD------QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~------~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      ....+.+|+.+++.++||||+++++++...      ...|+++|++.+ ++...+..  .++......++.+++.++.++
T Consensus        58 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~--~l~~~~~~~~~~ql~~aL~~L  134 (353)
T cd07850          58 HAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVMELMDA-NLCQVIQM--DLDHERMSYLLYQMLCGIKHL  134 (353)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEEeccCC-CHHHHHhh--cCCHHHHHHHHHHHHHHHHHH
Confidence            344566799999999999999999987643      357999999965 55544432  267778888889999999887


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                 +++|+|+||+||+++.+          ..++++|||+++..
T Consensus       135 H~~---------------------------------gi~H~dlkp~Nil~~~~----------~~~kL~Dfg~~~~~  168 (353)
T cd07850         135 HSA---------------------------------GIIHRDLKPSNIVVKSD----------CTLKILDFGLARTA  168 (353)
T ss_pred             HhC---------------------------------CeeeCCCCHHHEEECCC----------CCEEEccCccceeC
Confidence            753                                 68999999999999854          37899999998754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>KOG1027|consensus

Probab=99.38  E-value=7.8e-13  Score=109.62  Aligned_cols=111  Identities=33%  Similarity=0.536  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec---CC-CHHHHHHHHHHHHHHHHHhhhh
Q psy11428         10 VLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG---TL-SEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus        10 ~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ..+++|+..|+.- +||||+|+++...++.+.|++.|.|. -+|.+++...+   .. ..........++++++.++|..
T Consensus       547 ~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl  625 (903)
T KOG1027|consen  547 DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL  625 (903)
T ss_pred             HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc
Confidence            4677888888766 69999999999999999999999884 46666654421   01 1133455678888899888752


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                       +++|||+||+|||++...     .+....++|+|||+++.+.
T Consensus       626 ---------------------------------~iVHRDLkPQNILI~~~~-----~~~~~ra~iSDfglsKkl~  662 (903)
T KOG1027|consen  626 ---------------------------------KIVHRDLKPQNILISVPS-----ADGTLRAKISDFGLSKKLA  662 (903)
T ss_pred             ---------------------------------ccccccCCCceEEEEccC-----CCcceeEEecccccccccC
Confidence                                             789999999999998642     2355788999999998764

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.38  E-value=1.6e-12  Score=97.62  Aligned_cols=108  Identities=29%  Similarity=0.548  Sum_probs=85.6

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeee------cCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKE------SDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQA   77 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~------~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~   77 (160)
                      .....+..|+.+++.+ +|||++++++.+.      .....|+++||++++++...+...  ..+++.....+..+++.+
T Consensus        54 ~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~a  133 (282)
T cd06636          54 DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRG  133 (282)
T ss_pred             HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHH
Confidence            3445667788888888 6999999998874      346789999999999887765432  346677777888899999


Q ss_pred             HHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         78 LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        78 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +.++|..                                 +++|+|++|+|++++.+          ..++++|||+++.
T Consensus       134 l~~LH~~---------------------------------~ivH~dl~~~nili~~~----------~~~~l~dfg~~~~  170 (282)
T cd06636         134 LAHLHAH---------------------------------KVIHRDIKGQNVLLTEN----------AEVKLVDFGVSAQ  170 (282)
T ss_pred             HHHHHHC---------------------------------CcccCCCCHHHEEECCC----------CCEEEeeCcchhh
Confidence            9887753                                 58999999999999854          3689999999764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.38  E-value=7.2e-13  Score=99.47  Aligned_cols=105  Identities=39%  Similarity=0.617  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+.+|++.++.++|||++++++.+.+++..|+++||++ +++..++....  .+++.....+..+++.++.++|..   
T Consensus        43 ~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---  118 (283)
T cd07835          43 STAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---  118 (283)
T ss_pred             hHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            456779999999999999999999999999999999995 56766654433  578888888999999999887742   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       119 ------------------------------~~~H~dl~p~nil~~~~----------~~~~l~df~~~~~~  149 (283)
T cd07835         119 ------------------------------RVLHRDLKPQNLLIDRE----------GALKLADFGLARAF  149 (283)
T ss_pred             ------------------------------CeeCCCCCHHHEEEcCC----------CcEEEeeccccccc
Confidence                                          57999999999999853          37899999998643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.38  E-value=1.1e-12  Score=99.00  Aligned_cols=106  Identities=31%  Similarity=0.506  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHhhcC-CcceEEEeeeeecCCc-----EEEEEEEeCCCceeEEEee-----ecCCCHHHHHHHHHHHHHH
Q psy11428          9 IVLTRHILKELTELH-HENVVELLHCKESDQH-----VYLVMEFCNGGDLADYLVS-----KGTLSEDTIRIFLKQIVQA   77 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~-----~~lv~e~~~~g~l~~~l~~-----~~~~~~~~~~~~~~~~~~~   77 (160)
                      ...+.+|+.+++.++ |||++++++++.....     .|+++||+++ ++..++..     ...+++.....+..+++.+
T Consensus        44 ~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~  122 (295)
T cd07837          44 PPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKG  122 (295)
T ss_pred             chHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHH
Confidence            345678999999995 6999999998877666     8999999986 66555432     2346888888999999999


Q ss_pred             HHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         78 LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        78 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +.++|..                                 +++|+|++|+||+++.+         +..++++|||+++.
T Consensus       123 L~~LH~~---------------------------------~i~H~dl~~~nil~~~~---------~~~~kl~dfg~~~~  160 (295)
T cd07837         123 VAHCHKH---------------------------------GVMHRDLKPQNLLVDKQ---------KGLLKIADLGLGRA  160 (295)
T ss_pred             HHHHHHC---------------------------------CeeecCCChHHEEEecC---------CCeEEEeeccccee
Confidence            9988753                                 68999999999999852         34789999998864

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.38  E-value=1.1e-12  Score=99.46  Aligned_cols=105  Identities=37%  Similarity=0.587  Sum_probs=83.0

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCC--------cEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHH
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQ--------HVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~--------~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      ..+.+|+++++.++||||+++++.+...+        ..++++|++++ ++...+... ..+++..+..++.++++++.+
T Consensus        56 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~  134 (310)
T cd07865          56 ITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYY  134 (310)
T ss_pred             hHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence            34567899999999999999999876554        34999999875 554443322 357888899999999999998


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..                                 +++|+|++|+|++++.+          ..++++|||+++.+
T Consensus       135 lH~~---------------------------------~i~H~dl~p~nil~~~~----------~~~kl~dfg~~~~~  169 (310)
T cd07865         135 IHRN---------------------------------KILHRDMKAANILITKD----------GILKLADFGLARAF  169 (310)
T ss_pred             HHHC---------------------------------CeeccCCCHHHEEECCC----------CcEEECcCCCcccc
Confidence            8753                                 58999999999999744          37899999988643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.38  E-value=7.1e-13  Score=102.41  Aligned_cols=106  Identities=39%  Similarity=0.576  Sum_probs=86.7

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecC-----CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESD-----QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~-----~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ...+.+|+.+++.++||||+++++.+...     ...|+++||+. +++..++...+.+++.....+..+++.++.++|.
T Consensus        48 ~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  126 (337)
T cd07858          48 AKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHS  126 (337)
T ss_pred             hHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            44567799999999999999999877544     35899999996 5676666666778899999999999999998774


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|++|+|++++.+          ..++|+|||+++..
T Consensus       127 ~---------------------------------~i~H~dlkp~Nil~~~~----------~~~kL~Dfg~~~~~  158 (337)
T cd07858         127 A---------------------------------NVLHRDLKPSNLLLNAN----------CDLKICDFGLARTT  158 (337)
T ss_pred             C---------------------------------CEecCCCCHHHEEEcCC----------CCEEECcCcccccc
Confidence            3                                 58999999999999754          37899999998643

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>KOG1152|consensus

Probab=99.37  E-value=6.2e-13  Score=106.83  Aligned_cols=102  Identities=33%  Similarity=0.517  Sum_probs=84.6

Q ss_pred             HHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCC-CceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCcee
Q psy11428         14 HILKELTELHHENVVELLHCKESDQHVYLVMEFCNG-GDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVV   92 (160)
Q Consensus        14 ~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~-g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv   92 (160)
                      +++..|.+-.|+||+++++.|++++..|+++|.-.. .+|.+++.-+..+.+.....+.+|++-+.+.+|.         
T Consensus       618 qIla~l~~~sH~NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~---------  688 (772)
T KOG1152|consen  618 QILATLNKHSHENILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHD---------  688 (772)
T ss_pred             HHHHHhhhcCccchhhhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccc---------
Confidence            344444444599999999999999999999987543 4889999888899999999999999888877654         


Q ss_pred             EEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         93 ELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        93 ~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                              .+++|||||-+||+++.++          -+|++|||.|.+.
T Consensus       689 ------------------------~~ivhrdikdenvivd~~g----------~~klidfgsaa~~  720 (772)
T KOG1152|consen  689 ------------------------QGIVHRDIKDENVIVDSNG----------FVKLIDFGSAAYT  720 (772)
T ss_pred             ------------------------cCceecccccccEEEecCC----------eEEEeeccchhhh
Confidence                                    2799999999999998654          7899999998754

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.37  E-value=2e-12  Score=96.79  Aligned_cols=102  Identities=29%  Similarity=0.503  Sum_probs=82.9

Q ss_pred             HHHHHHHHhhcC-CcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         12 TRHILKELTELH-HENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        12 ~~~~~~~l~~l~-h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...|+..+.++. |||++++++++.++  +..++++||+++ ++...+.. .+.+++.....+..+++.++.++|..   
T Consensus        44 ~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---  119 (282)
T cd07831          44 NLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---  119 (282)
T ss_pred             HHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            346777788885 99999999999887  899999999975 55444433 34678888899999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.           +.++++|||+++.+
T Consensus       120 ------------------------------~i~H~dl~p~ni~l~~-----------~~~kl~dfg~~~~~  149 (282)
T cd07831         120 ------------------------------GIFHRDIKPENILIKD-----------DILKLADFGSCRGI  149 (282)
T ss_pred             ------------------------------CceecccCHHHEEEcC-----------CCeEEEeccccccc
Confidence                                          5899999999999974           37899999998654

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.37  E-value=1.9e-12  Score=100.33  Aligned_cols=104  Identities=39%  Similarity=0.612  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCC------cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQ------HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~------~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ...+..|+++++.++||||+++.+++....      ..+++++++ ++++...+. .+.+++.....+..+++.++.++|
T Consensus        58 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH  135 (343)
T cd07880          58 AKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIH  135 (343)
T ss_pred             HHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            345678999999999999999999887554      358999998 667765543 356888888999999999999877


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      ..                                 +++|+|++|+||+++.+          ..++++|||+++.
T Consensus       136 ~~---------------------------------gi~H~dlkp~Nill~~~----------~~~kl~dfg~~~~  167 (343)
T cd07880         136 AA---------------------------------GIIHRDLKPGNLAVNED----------CELKILDFGLARQ  167 (343)
T ss_pred             hC---------------------------------CeecCCCCHHHEEEcCC----------CCEEEeecccccc
Confidence            42                                 68999999999999844          3789999998864

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.37  E-value=1.7e-12  Score=100.14  Aligned_cols=106  Identities=37%  Similarity=0.591  Sum_probs=84.2

Q ss_pred             HHHHHHHHHHHHhhc-CCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          8 SIVLTRHILKELTEL-HHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .......|+.+++.+ +||||+++++++...  ...|+++|++++ ++..++... .+.+.....+..+++.++.++|..
T Consensus        49 ~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~  126 (337)
T cd07852          49 DAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIYLVFEYMET-DLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSG  126 (337)
T ss_pred             hhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEEEEeccccc-CHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHC
Confidence            344566799999999 999999999987643  468999999974 776655443 567777777889999999887742


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|++|+|++++.+          +.++++|||+++.+
T Consensus       127 ---------------------------------~i~H~dl~p~nill~~~----------~~~kl~d~g~~~~~  157 (337)
T cd07852         127 ---------------------------------NVIHRDLKPSNILLNSD----------CRVKLADFGLARSL  157 (337)
T ss_pred             ---------------------------------CeecCCCCHHHEEEcCC----------CcEEEeeccchhcc
Confidence                                             68999999999999854          37899999988643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.36  E-value=6.3e-13  Score=102.08  Aligned_cols=107  Identities=38%  Similarity=0.589  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCC-----cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQ-----HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~-----~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ....+..|+++++.++||||+++.+++....     .+|++++++++ ++...+...+.+++.....++.+++.++.++|
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH  120 (330)
T cd07834          42 DAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLH  120 (330)
T ss_pred             hhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3456778999999999999999999887665     78999999974 67766665567888888889999999998877


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|+||.||+++.+          +.++++|||++...
T Consensus       121 ~~---------------------------------gi~H~dlkp~nili~~~----------~~~~L~dfg~~~~~  153 (330)
T cd07834         121 SA---------------------------------NVIHRDLKPSNILVNSN----------CDLKICDFGLARGV  153 (330)
T ss_pred             hC---------------------------------CeecCCCCHHHEEEcCC----------CCEEEcccCceEee
Confidence            53                                 68999999999999854          47899999988643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.35  E-value=2.1e-12  Score=98.38  Aligned_cols=104  Identities=37%  Similarity=0.573  Sum_probs=83.7

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+|+++++.++|||++++++++...  +..++++|++.+ ++...+.. ...+++.....+..+++.++.++|..   
T Consensus        52 ~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---  127 (309)
T cd07845          52 SSLREITLLLNLRHPNIVELKEVVVGKHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---  127 (309)
T ss_pred             hhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            455799999999999999999988654  568999999975 55444332 35578888888999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.+          ..++|+|||+++..
T Consensus       128 ------------------------------~i~H~dl~p~nil~~~~----------~~~kL~dfg~~~~~  158 (309)
T cd07845         128 ------------------------------FIIHRDLKVSNLLLTDK----------GCLKIADFGLARTY  158 (309)
T ss_pred             ------------------------------CeecCCCCHHHEEECCC----------CCEEECccceeeec
Confidence                                          58999999999999744          37899999988643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0695|consensus

Probab=99.35  E-value=2.6e-12  Score=97.95  Aligned_cols=91  Identities=30%  Similarity=0.568  Sum_probs=83.5

Q ss_pred             CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC
Q psy11428         23 HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ  102 (160)
Q Consensus        23 ~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~  102 (160)
                      +||.+|.|+.||++++.+|.|.||.+||+|...+..++.+++...+.+..+++-++.++|.+                  
T Consensus       309 n~pflvglhscfqtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r------------------  370 (593)
T KOG0695|consen  309 NNPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER------------------  370 (593)
T ss_pred             CCCeEEehhhhhcccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc------------------
Confidence            79999999999999999999999999999999988888899999999999999999887753                  


Q ss_pred             eeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428        103 HVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus       103 ~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                     ++|+||+|..||+++.-          +.+|+.|+|+++
T Consensus       371 ---------------giiyrdlkldnvlldae----------ghikltdygmck  399 (593)
T KOG0695|consen  371 ---------------GIIYRDLKLDNVLLDAE----------GHIKLTDYGMCK  399 (593)
T ss_pred             ---------------CeeeeeccccceEEccC----------Cceeecccchhh
Confidence                           79999999999999854          489999999985

>KOG0587|consensus

Probab=99.34  E-value=3.3e-12  Score=106.45  Aligned_cols=108  Identities=33%  Similarity=0.632  Sum_probs=84.8

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeee-----cCCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKE-----SDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~-----~~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ..+.++.++++.++  .|||++.+++++.     -.+.+|+|||||.||++.+.++.  -.++.+..+..++.+++.++.
T Consensus        60 eEiE~eynil~~~~--~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~  137 (953)
T KOG0587|consen   60 EEIELEYNMLKKYS--HHPNVATFYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLA  137 (953)
T ss_pred             HHHHHHHHHHHhcc--CCCCcceEEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHH
Confidence            34555555555433  6999999998764     45789999999999998876543  345778888888888888887


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                      ++|.+                                 .++|||+|-.|||++.++          .+|+.|||.++.++
T Consensus       138 HLH~n---------------------------------kviHRDikG~NiLLT~e~----------~VKLvDFGvSaQld  174 (953)
T KOG0587|consen  138 HLHNN---------------------------------KVIHRDIKGQNVLLTENA----------EVKLVDFGVSAQLD  174 (953)
T ss_pred             HHhhc---------------------------------ceeeecccCceEEEeccC----------cEEEeeeeeeeeee
Confidence            76542                                 579999999999999665          79999999998765

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.34  E-value=1.5e-12  Score=97.39  Aligned_cols=106  Identities=37%  Similarity=0.569  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .....+|+..++.++|||++++++.+..++..++++||+++ ++...+.. .+.+++.....++.+++.++.++|..   
T Consensus        42 ~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---  117 (283)
T cd05118          42 PKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---  117 (283)
T ss_pred             HHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            45667889999999999999999999999999999999976 66554443 34678888888999999999887753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+||+++.+          ..++++|||.+..+
T Consensus       118 ------------------------------~i~H~dl~p~nili~~~----------~~~~l~df~~~~~~  148 (283)
T cd05118         118 ------------------------------GILHRDLKPENLLINTE----------GVLKLADFGLARSF  148 (283)
T ss_pred             ------------------------------CeeecCcCHHHEEECCC----------CcEEEeeeeeeEec
Confidence                                          58999999999999854          37899999987643

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0576|consensus

Probab=99.34  E-value=3.4e-13  Score=109.69  Aligned_cols=105  Identities=30%  Similarity=0.515  Sum_probs=91.1

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         12 TRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                      .++|+-+++.++||||+.+++++...+..+++|||+.+|++.+-...-+++++......+++.++++.++|.        
T Consensus        59 iqqei~~~~dc~h~nivay~gsylr~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs--------  130 (829)
T KOG0576|consen   59 IQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHS--------  130 (829)
T ss_pred             cccceeeeecCCCcChHHHHhhhhhhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhc--------
Confidence            467788889999999999999999999999999999999999877677889999999899888888877664        


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                               .+.+|||+|-.|++++..          +.+|+.|||.+..++
T Consensus       131 -------------------------~gk~hRdiKGanilltd~----------gDvklaDfgvsaqit  163 (829)
T KOG0576|consen  131 -------------------------QGKIHRDIKGANILLTDE----------GDVKLADFGVSAQIT  163 (829)
T ss_pred             -------------------------CCcccccccccceeeccc----------CceeecccCchhhhh
Confidence                                     257999999999999854          379999999986543

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.34  E-value=5.5e-12  Score=94.57  Aligned_cols=102  Identities=25%  Similarity=0.435  Sum_probs=79.7

Q ss_pred             HHHHH-HhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEE----eeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         14 HILKE-LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL----VSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        14 ~~~~~-l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      .|+.+ ++.++|||++++++.+...+..|+++||+++ ++...+    .....+++.....+..+++.++.++|..    
T Consensus        48 ~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~----  122 (283)
T cd06617          48 MDLDISMRSVDCPYTVTFYGALFREGDVWICMEVMDT-SLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK----  122 (283)
T ss_pred             HHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhhhhcc-cHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc----
Confidence            34444 5667899999999999999999999999974 443322    2234578888889999999999887642    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  .+++|+|+||+|++++.+          ..++++|||+++.+
T Consensus       123 ----------------------------~~i~h~dlkp~nil~~~~----------~~~kl~dfg~~~~~  154 (283)
T cd06617         123 ----------------------------LSVIHRDVKPSNVLINRN----------GQVKLCDFGISGYL  154 (283)
T ss_pred             ----------------------------CCeecCCCCHHHEEECCC----------CCEEEeeccccccc
Confidence                                        157999999999999754          37899999998754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.33  E-value=3.5e-12  Score=98.32  Aligned_cols=106  Identities=32%  Similarity=0.461  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHhhc-CCcceEEEeeeeec----CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          9 IVLTRHILKELTEL-HHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         9 ~~~~~~~~~~l~~l-~h~~iv~l~~~~~~----~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ...+.+|+++++++ +||||+++++....    ...+|+++++++ +++...+.....+++.....+..+++.++.++|.
T Consensus        45 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~  123 (332)
T cd07857          45 AKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHS  123 (332)
T ss_pred             HHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            34567789999988 59999999885432    245788888886 5676666566678888999999999999998774


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|+||+|++++.+          ..++|+|||+++.+
T Consensus       124 ~---------------------------------givH~dlkp~Nili~~~----------~~~kl~Dfg~a~~~  155 (332)
T cd07857         124 A---------------------------------NVLHRDLKPGNLLVNAD----------CELKICDFGLARGF  155 (332)
T ss_pred             C---------------------------------CcccCCCCHHHeEEcCC----------CCEEeCcCCCceec
Confidence            2                                 68999999999999754          37899999998643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG2345|consensus

Probab=99.33  E-value=9.7e-13  Score=96.20  Aligned_cols=113  Identities=30%  Similarity=0.417  Sum_probs=91.4

Q ss_pred             cchhHHHHHHHHHHHHhhcCCcceEEEeeeee-----cCCcEEEEEEEeCCCceeEEEee---ec-CCCHHHHHHHHHHH
Q psy11428          4 QSKSSIVLTRHILKELTELHHENVVELLHCKE-----SDQHVYLVMEFCNGGDLADYLVS---KG-TLSEDTIRIFLKQI   74 (160)
Q Consensus         4 ~~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~-----~~~~~~lv~e~~~~g~l~~~l~~---~~-~~~~~~~~~~~~~~   74 (160)
                      .+...+..++.|++.-++++|||++++.+...     +..+.|++++|...|++.+.+..   ++ .+++.....++.++
T Consensus        57 ~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gi  136 (302)
T KOG2345|consen   57 HSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGI  136 (302)
T ss_pred             cchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHH
Confidence            44578889999999999999999999876433     33469999999999998886543   33 57888888999999


Q ss_pred             HHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeec
Q psy11428         75 VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGF  154 (160)
Q Consensus        75 ~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~  154 (160)
                      ++++..+|...                               +.+.|||+||.|++++..+          .+++.|||.
T Consensus       137 c~gL~~lH~~~-------------------------------~~yAH~DiKP~NILls~~~----------~~vl~D~GS  175 (302)
T KOG2345|consen  137 CRGLEALHEKE-------------------------------PPYAHRDIKPANILLSDSG----------LPVLMDLGS  175 (302)
T ss_pred             HHHHHHHhccC-------------------------------CcccccCCCcceeEecCCC----------ceEEEeccC
Confidence            99999887431                               2578999999999998543          789999998


Q ss_pred             ccc
Q psy11428        155 ARF  157 (160)
Q Consensus       155 a~~  157 (160)
                      ++.
T Consensus       176 ~~~  178 (302)
T KOG2345|consen  176 ATQ  178 (302)
T ss_pred             ccc
Confidence            764

>KOG0668|consensus

Probab=99.33  E-value=9.3e-13  Score=95.66  Aligned_cols=106  Identities=28%  Similarity=0.525  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHhhcC-CcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          8 SIVLTRHILKELTELH-HENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ...-...|+.+|+.|. +|||+.|+++..++  ....+++|+..+.++....   ..++...++.++.+++.++.++|+ 
T Consensus        75 kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS-  150 (338)
T KOG0668|consen   75 KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHS-  150 (338)
T ss_pred             HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHh-
Confidence            3445678999999997 99999999988655  4568999999998876543   246778899999999999887765 


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      ++++|||+||.|++++..         ...++++|+|+|-|.
T Consensus       151 --------------------------------~GImHRDVKPhNvmIdh~---------~rkLrlIDWGLAEFY  183 (338)
T KOG0668|consen  151 --------------------------------MGIMHRDVKPHNVMIDHE---------LRKLRLIDWGLAEFY  183 (338)
T ss_pred             --------------------------------cCcccccCCcceeeechh---------hceeeeeecchHhhc
Confidence                                            389999999999999853         346899999999764

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.33  E-value=1.9e-12  Score=98.21  Aligned_cols=105  Identities=33%  Similarity=0.538  Sum_probs=82.7

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecC--------CcEEEEEEEeCCCceeEEEe-eecCCCHHHHHHHHHHHHHHHHH
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESD--------QHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~--------~~~~lv~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      ....+|++.++.++||||+++++.+.+.        ..++++++|+.+ ++...+. ....+++..+..+..++++++.+
T Consensus        52 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~  130 (311)
T cd07866          52 ITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINY  130 (311)
T ss_pred             hhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHH
Confidence            4567899999999999999998866433        346999999875 4433332 23468888999999999999998


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..                                 +++|+|++|+||+++.+          ..++++|||+++..
T Consensus       131 lH~~---------------------------------~i~H~dl~p~nil~~~~----------~~~~l~dfg~~~~~  165 (311)
T cd07866         131 LHEN---------------------------------HILHRDIKAANILIDNQ----------GILKIADFGLARPY  165 (311)
T ss_pred             HHhC---------------------------------CeecCCCCHHHEEECCC----------CCEEECcCccchhc
Confidence            8752                                 68999999999999854          37899999998643

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.33  E-value=2.3e-12  Score=99.47  Aligned_cols=106  Identities=38%  Similarity=0.579  Sum_probs=83.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecC-----CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESD-----QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~-----~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ....+.+|+.+++.++||||+++++.+...     ..+|+++|++++ ++...+. .+.+++..+..+..+++.++.++|
T Consensus        46 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH  123 (336)
T cd07849          46 FCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQELMET-DLYKLIK-TQHLSNDHIQYFLYQILRGLKYIH  123 (336)
T ss_pred             hHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehhccc-CHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            344567799999999999999998865433     358999999975 5555443 345788888889999999999887


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|||+||+|++++.+          ..++++|||+++..
T Consensus       124 ~~---------------------------------~ivH~dlkp~Nill~~~----------~~~kl~dfg~~~~~  156 (336)
T cd07849         124 SA---------------------------------NVLHRDLKPSNLLLNTN----------CDLKICDFGLARIA  156 (336)
T ss_pred             hC---------------------------------CeeccCCCHHHEEECCC----------CCEEECcccceeec
Confidence            53                                 68999999999999754          37899999988643

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>KOG3653|consensus

Probab=99.33  E-value=1.4e-12  Score=102.57  Aligned_cols=118  Identities=25%  Similarity=0.400  Sum_probs=89.8

Q ss_pred             hhHHHHHHHHHHHH--hhcCCcceEEEeeeeecCC----cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKEL--TELHHENVVELLHCKESDQ----HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         6 ~~~~~~~~~~~~~l--~~l~h~~iv~l~~~~~~~~----~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ....-.+++|-+|.  ..++|+||+++++......    +.++|++|.+.|+|.+|++.+ .+++.....+...++.++.
T Consensus       243 ~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa  321 (534)
T KOG3653|consen  243 EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLA  321 (534)
T ss_pred             HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHH
Confidence            33344444454443  4679999999998776544    899999999999999998765 4677778888888899999


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|...                       . ..++.-+.|+|||+|++|||+..+          .++-|+|||+|.-+
T Consensus       322 ~LHee~-----------------------p-~~d~~Kp~IaHRDlkSkNVLvK~D----------lTccIaDFGLAl~~  366 (534)
T KOG3653|consen  322 HLHEEL-----------------------P-RGDHHKPPIAHRDLKSKNVLVKND----------LTCCIADFGLALRL  366 (534)
T ss_pred             HhcccC-----------------------C-cCCCCCCccccccccccceEEccC----------CcEEeeccceeEEe
Confidence            988521                       0 234445789999999999999743          48899999999654

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.32  E-value=1.8e-12  Score=97.21  Aligned_cols=102  Identities=36%  Similarity=0.592  Sum_probs=85.3

Q ss_pred             HHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         13 RHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        13 ~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      .+|+..++.++ |||++++++++.+++..++++|++ ++++..++....  .+++.....+..+++.++.++|..     
T Consensus        45 ~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~-----  118 (283)
T cd07830          45 LREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH-----  118 (283)
T ss_pred             HHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            45788889999 999999999999999999999999 777776655443  578888888999999999887643     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++|+|++|.|++++.+          ..++++|||++...
T Consensus       119 ----------------------------~i~H~dl~~~ni~i~~~----------~~~~l~d~~~~~~~  149 (283)
T cd07830         119 ----------------------------GFFHRDLKPENLLVSGP----------EVVKIADFGLAREI  149 (283)
T ss_pred             ----------------------------CcccCCCChhhEEEcCC----------CCEEEeecccceec
Confidence                                        57999999999999854          37899999988644

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.32  E-value=1.5e-12  Score=97.47  Aligned_cols=106  Identities=41%  Similarity=0.678  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .....+|+.+++.++|||++++++.+.+.+..++++|++++ ++..++... ..+++.....++.+++.++.++|..   
T Consensus        42 ~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---  117 (282)
T cd07829          42 PSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---  117 (282)
T ss_pred             cHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34566789999999999999999999999999999999974 777766544 4678888888999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+|++++.+          ..++++|||+++..
T Consensus       118 ------------------------------~i~H~~l~~~ni~~~~~----------~~~~l~d~g~~~~~  148 (282)
T cd07829         118 ------------------------------RILHRDLKPQNILINRD----------GVLKLADFGLARAF  148 (282)
T ss_pred             ------------------------------CcccCCCChheEEEcCC----------CCEEEecCCccccc
Confidence                                          58999999999999853          47899999988654

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.31  E-value=8.2e-12  Score=96.31  Aligned_cols=106  Identities=40%  Similarity=0.549  Sum_probs=84.0

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeec-CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKES-DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~-~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|+++++.++|||++++.+++.. ....++++|+++ +++...+. ...+++.....++.++++++.++|..  
T Consensus        52 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~~~~~~~~~~~~ql~~aL~~LH~~--  127 (328)
T cd07856          52 LAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYFVTELLG-TDLHRLLT-SRPLEKQFIQYFLYQILRGLKYVHSA--  127 (328)
T ss_pred             hhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEEEeehhc-cCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            34556789999999999999999998865 567899999984 56655543 34567777778889999999887753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|.|++++.+          ..++++|||.++..
T Consensus       128 -------------------------------~iiH~dl~p~Nili~~~----------~~~~l~dfg~~~~~  158 (328)
T cd07856         128 -------------------------------GVVHRDLKPSNILINEN----------CDLKICDFGLARIQ  158 (328)
T ss_pred             -------------------------------CcccCCCCHHHEeECCC----------CCEEeCcccccccc
Confidence                                           58999999999999743          37899999988643

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.29  E-value=2.1e-11  Score=88.38  Aligned_cols=93  Identities=20%  Similarity=0.236  Sum_probs=69.2

Q ss_pred             HHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         11 LTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        11 ~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ++++|+++|++|+ +++++.+++.    +..|++++|+.|.+|......      .. ..+..++..++..+|..     
T Consensus        47 l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI~G~~L~~~~~~------~~-~~~~~qi~~~L~~lH~~-----  110 (218)
T PRK12274         47 LARREALALRQLDGLPRTPRLLHW----DGRHLDRSYLAGAAMYQRPPR------GD-LAYFRAARRLLQQLHRC-----  110 (218)
T ss_pred             HHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeeecCccHHhhhhh------hh-HHHHHHHHHHHHHHHHC-----
Confidence            6789999999995 4778888774    447999999999888643211      11 23455667777776542     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCC-CCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDL-KPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dl-k~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                  +++|||+ ||.|++++.+          +.++|+|||+|..
T Consensus       111 ----------------------------GIvHrDL~kp~NILv~~~----------g~i~LIDFG~A~~  141 (218)
T PRK12274        111 ----------------------------GVAHNDLAKEANWLVQED----------GSPAVIDFQLAVR  141 (218)
T ss_pred             ----------------------------cCccCCCCCcceEEEcCC----------CCEEEEECCCcee
Confidence                                        6899999 7999999743          3689999999863

>KOG0603|consensus

Probab=99.29  E-value=2.6e-12  Score=103.88  Aligned_cols=104  Identities=31%  Similarity=0.476  Sum_probs=82.8

Q ss_pred             HHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         13 RHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        13 ~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                      +.|..++... +|||++++.+.+.++...|+|+|.+.|+.+.+.+....... .....+..+++.++.++|..       
T Consensus       363 ~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~-------  434 (612)
T KOG0603|consen  363 QDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQ-------  434 (612)
T ss_pred             ccccchhhhhcCCCcceeecceecCCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhc-------
Confidence            4445444333 79999999999999999999999999998887766555444 56666888999999888752       


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                +++|||+||.|||+..         ..++++++|||+++.++
T Consensus       435 --------------------------gvvhRDLkp~NIL~~~---------~~g~lrltyFG~a~~~~  467 (612)
T KOG0603|consen  435 --------------------------GVVHRDLKPGNILLDG---------SAGHLRLTYFGFWSELE  467 (612)
T ss_pred             --------------------------CeeecCCChhheeecC---------CCCcEEEEEechhhhCc
Confidence                                      7899999999999951         23479999999998654

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.29  E-value=1.2e-11  Score=95.97  Aligned_cols=104  Identities=37%  Similarity=0.592  Sum_probs=82.2

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecC------CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESD------QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~------~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ...+.+|+++++.++||||+++.+++...      ...|++++++ ++++...+. .+.+++.....+..+++.++.++|
T Consensus        60 ~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH  137 (345)
T cd07877          60 AKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK-CQKLTDDHVQFLIYQILRGLKYIH  137 (345)
T ss_pred             HHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEEehhc-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34566799999999999999999877533      3478888876 667765543 345788888889999999999887


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      ..                                 +++|+|++|+||+++.+          +.++++|||+++.
T Consensus       138 ~~---------------------------------~ivH~dlkp~NIll~~~----------~~~kl~dfg~~~~  169 (345)
T cd07877         138 SA---------------------------------DIIHRDLKPSNLAVNED----------CELKILDFGLARH  169 (345)
T ss_pred             HC---------------------------------CeeecCCChHHEEEcCC----------CCEEEeccccccc
Confidence            53                                 68999999999999854          3789999999864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.28  E-value=2.1e-11  Score=91.84  Aligned_cols=110  Identities=24%  Similarity=0.359  Sum_probs=84.4

Q ss_pred             hHHHHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCC--ceeEEE--eeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          7 SSIVLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGG--DLADYL--VSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g--~l~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      .....+.+|+.++.++. ||||+++++.+...+..++++|+++..  ++...+  ...+.+++.....+..+++.++.++
T Consensus        44 ~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~l  123 (288)
T cd06616          44 KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYL  123 (288)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            34556678888888886 999999999998889999999998652  222211  1235678888888999999998877


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                .+++|||+||+|++++.+          ..++++|||+++.+
T Consensus       124 h~~--------------------------------~~i~H~dlkp~Nil~~~~----------~~~kl~dfg~~~~~  158 (288)
T cd06616         124 KEE--------------------------------LKIIHRDVKPSNILLDRN----------GNIKLCDFGISGQL  158 (288)
T ss_pred             hhc--------------------------------CCeeccCCCHHHEEEccC----------CcEEEeecchhHHh
Confidence            531                                157999999999999753          37899999998643

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.27  E-value=1.7e-11  Score=91.88  Aligned_cols=103  Identities=39%  Similarity=0.609  Sum_probs=80.1

Q ss_pred             HHHHHHHHhh---cCCcceEEEeeeeecCCc-----EEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHh
Q psy11428         12 TRHILKELTE---LHHENVVELLHCKESDQH-----VYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus        12 ~~~~~~~l~~---l~h~~iv~l~~~~~~~~~-----~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      +.+|+.+++.   ++|||++++++++.....     .++++|++++ ++..++...  ..+++.....+..+++.++.++
T Consensus        45 ~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~L  123 (287)
T cd07838          45 TLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFL  123 (287)
T ss_pred             HHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            4455555544   469999999999987776     9999999975 565544332  2478888888999999999988


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                 +++|+|++|+|++++.+          ..++++|||++..+
T Consensus       124 H~~---------------------------------~i~h~~l~~~nili~~~----------~~~~l~dfg~~~~~  157 (287)
T cd07838         124 HSH---------------------------------RIVHRDLKPQNILVTSD----------GQVKIADFGLARIY  157 (287)
T ss_pred             HHC---------------------------------CeeeccCChhhEEEccC----------CCEEEeccCcceec
Confidence            752                                 57999999999999854          47899999988644

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>KOG0983|consensus

Probab=99.25  E-value=1.1e-12  Score=97.34  Aligned_cols=94  Identities=30%  Similarity=0.457  Sum_probs=73.0

Q ss_pred             CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe-eecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecC
Q psy11428         23 HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESD  101 (160)
Q Consensus        23 ~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~  101 (160)
                      ..|.||+++++|..+..++++||.++. +....++ -++++++..+-.+...++.++.++...   |             
T Consensus       149 dcpyIV~c~GyFi~n~dV~IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeK---H-------------  211 (391)
T KOG0983|consen  149 DCPYIVQCFGYFITNTDVFICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEK---H-------------  211 (391)
T ss_pred             CCCeeeeeeeEEeeCchHHHHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHh---c-------------
Confidence            489999999999999999999998743 3333222 246788887777777777887776432   1             


Q ss_pred             CeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428        102 QHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus       102 ~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                      +++|||+||+|||++..          +++|++|||++..+.
T Consensus       212 ----------------~viHRDvKPSNILlDe~----------GniKlCDFGIsGrlv  243 (391)
T KOG0983|consen  212 ----------------GVIHRDVKPSNILLDER----------GNIKLCDFGISGRLV  243 (391)
T ss_pred             ----------------ceeecccCccceEEccC----------CCEEeecccccceee
Confidence                            68999999999999854          489999999987654

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.25  E-value=8.7e-12  Score=96.58  Aligned_cols=107  Identities=36%  Similarity=0.646  Sum_probs=84.5

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecC--------------CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESD--------------QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK   72 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--------------~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~   72 (160)
                      .......+|+++++.++||||+++++++...              ...|+++||+++ ++..++. .+.+++.....++.
T Consensus        44 ~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~-~~~l~~~~~~~~~~  121 (342)
T cd07854          44 QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEYMET-DLANVLE-QGPLSEEHARLFMY  121 (342)
T ss_pred             chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeecccc-cHHHHHH-cCCCCHHHHHHHHH
Confidence            3455677899999999999999998766543              357999999974 6655443 34678888899999


Q ss_pred             HHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeee
Q psy11428         73 QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADF  152 (160)
Q Consensus        73 ~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~df  152 (160)
                      ++++++.++|..                                 +++|+|+||+|++++..         +..++++||
T Consensus       122 qi~~aL~~LH~~---------------------------------givH~dikp~Nili~~~---------~~~~kl~df  159 (342)
T cd07854         122 QLLRGLKYIHSA---------------------------------NVLHRDLKPANVFINTE---------DLVLKIGDF  159 (342)
T ss_pred             HHHHHHHHHHhC---------------------------------CcccCCCCHHHEEEcCC---------CceEEECCc
Confidence            999999988742                                 68999999999999743         236899999


Q ss_pred             ecccc
Q psy11428        153 GFARF  157 (160)
Q Consensus       153 g~a~~  157 (160)
                      |+++.
T Consensus       160 g~~~~  164 (342)
T cd07854         160 GLARI  164 (342)
T ss_pred             cccee
Confidence            98864

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.25  E-value=8.2e-12  Score=90.72  Aligned_cols=107  Identities=45%  Similarity=0.739  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+++|++.++.++|+|++++.+.+......++++|+.+++++..++.....++......+..+++.++..+|..    
T Consensus        31 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~----  106 (244)
T smart00220       31 RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSN----  106 (244)
T ss_pred             HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHc----
Confidence            5678899999999999999999999988899999999999999887765544477788888888899888887643    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|+|++|.|++++.+          ..++++|||.+..+
T Consensus       107 -----------------------------~i~h~~i~~~ni~~~~~----------~~~~l~d~~~~~~~  137 (244)
T smart00220      107 -----------------------------GIIHRDLKPENILLDED----------GHVKLADFGLARQL  137 (244)
T ss_pred             -----------------------------CeecCCcCHHHeEECCC----------CcEEEccccceeee
Confidence                                         58999999999999854          37899999988644

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.25  E-value=6.3e-12  Score=97.39  Aligned_cols=105  Identities=39%  Similarity=0.591  Sum_probs=84.8

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCc------EEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQH------VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~------~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      .....+|+.+++.++|||++++.+++.....      .+++++++ ++++...+.. ..+++..+..++.+++.++.++|
T Consensus        58 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH  135 (343)
T cd07851          58 AKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIH  135 (343)
T ss_pred             HHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence            3455679999999999999999887766554      89999998 5577665543 46788888889999999998877


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|++|+|++++.+          +.++++|||++...
T Consensus       136 ~~---------------------------------gi~H~dlkp~Nill~~~----------~~~kL~dfg~~~~~  168 (343)
T cd07851         136 SA---------------------------------GIIHRDLKPSNIAVNED----------CELKILDFGLARHT  168 (343)
T ss_pred             HC---------------------------------CeecCCCCHHHeEECCC----------CCEEEccccccccc
Confidence            42                                 68999999999999854          37899999998643

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.24  E-value=5.4e-11  Score=84.19  Aligned_cols=108  Identities=44%  Similarity=0.731  Sum_probs=90.5

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|++.++.++|++++++++.+......++++|+.+++++..++... ..++......+..+++.++..+|..   
T Consensus        35 ~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---  111 (215)
T cd00180          35 LEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---  111 (215)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            467889999999999999999999999889999999999999988876544 3577778888888999988887642   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|.|++++..         ...++++|||.+...
T Consensus       112 ------------------------------~~~H~dl~~~ni~~~~~---------~~~~~l~d~~~~~~~  143 (215)
T cd00180         112 ------------------------------GIIHRDLKPENILLDSD---------NGKVKLADFGLSKLL  143 (215)
T ss_pred             ------------------------------CeeccCCCHhhEEEeCC---------CCcEEEecCCceEEc
Confidence                                          68999999999999841         237899999988644

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0984|consensus

Probab=99.24  E-value=8.7e-12  Score=89.32  Aligned_cols=98  Identities=30%  Similarity=0.515  Sum_probs=76.7

Q ss_pred             hhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEE----EeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEe
Q psy11428         20 TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADY----LVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELL   95 (160)
Q Consensus        20 ~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~   95 (160)
                      +....|.+|++++.+...+.++++||.+.- ++..+    +...+.+++..+-.+...++.++.+++..           
T Consensus       100 r~~~CPf~V~FyGa~~regdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k-----------  167 (282)
T KOG0984|consen  100 RTVDCPFTVHFYGALFREGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK-----------  167 (282)
T ss_pred             cCCCCCeEEEeehhhhccccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH-----------
Confidence            345799999999999999999999998754 33322    22335678888888888888888877653           


Q ss_pred             eeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccCC
Q psy11428         96 HCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD  160 (160)
Q Consensus        96 ~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~~  160 (160)
                                           ..+||||+||.|||++..          +.+|++|||.+.++.|
T Consensus       168 ---------------------L~vIHRDvKPsNiLIn~~----------GqVKiCDFGIsG~L~d  201 (282)
T KOG0984|consen  168 ---------------------LSVIHRDVKPSNILINYD----------GQVKICDFGISGYLVD  201 (282)
T ss_pred             ---------------------hhhhhccCCcceEEEccC----------CcEEEcccccceeehh
Confidence                                 268999999999999854          4899999999987754

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.22  E-value=2e-11  Score=92.44  Aligned_cols=103  Identities=31%  Similarity=0.444  Sum_probs=78.3

Q ss_pred             HHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         13 RHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        13 ~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      ..++.++.... ||||+++++.+.+....|+++|++++ ++...... .+.+++.....+..+++.++.++|..      
T Consensus        61 ~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~------  133 (296)
T cd06618          61 LMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK------  133 (296)
T ss_pred             HHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh------
Confidence            34555555554 99999999999999999999999854 43332222 24577778888889999999887641      


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                .+++|+|++|+|++++.+          ..++|+|||++..+
T Consensus       134 --------------------------~~i~H~dl~p~nill~~~----------~~~kL~dfg~~~~~  165 (296)
T cd06618         134 --------------------------HGVIHRDVKPSNILLDAS----------GNVKLCDFGISGRL  165 (296)
T ss_pred             --------------------------CCEecCCCcHHHEEEcCC----------CCEEECccccchhc
Confidence                                      158999999999999744          37899999998643

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.22  E-value=2.4e-11  Score=94.13  Aligned_cols=103  Identities=37%  Similarity=0.554  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCC------cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQ------HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~------~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ...+..|+.+++.++||||+++++++....      ..|++++++.. ++....  ...+++.....+..+++.++.++|
T Consensus        58 ~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH  134 (342)
T cd07879          58 AKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLVMPYMQT-DLQKIM--GHPLSEDKVQYLVYQMLCGLKYIH  134 (342)
T ss_pred             hhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEEeccccc-CHHHHH--cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            345678999999999999999999876543      46899998864 443322  235778888888899999998877


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      ..                                 +++|||++|+||+++.+          +.++++|||+++.
T Consensus       135 ~~---------------------------------~i~H~dlkp~NIll~~~----------~~~kL~dfg~~~~  166 (342)
T cd07879         135 SA---------------------------------GIIHRDLKPGNLAVNED----------CELKILDFGLARH  166 (342)
T ss_pred             HC---------------------------------CcccCCCCHHHEEECCC----------CCEEEeeCCCCcC
Confidence            42                                 58999999999999854          3789999999864

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.22  E-value=3.8e-11  Score=86.58  Aligned_cols=108  Identities=47%  Similarity=0.754  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecC-CCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|++.++.++|+|++++++.+......++++|+++++++..++..... +++.....+..+++.++..+|..  
T Consensus        40 ~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--  117 (225)
T smart00221       40 QREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL--  117 (225)
T ss_pred             HHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            466888899999999999999999999888999999999999998877655444 67778888888888888877642  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|.|++++.+          ..++++|||++...
T Consensus       118 -------------------------------~i~h~di~~~ni~v~~~----------~~~~l~d~g~~~~~  148 (225)
T smart00221      118 -------------------------------GIVHRDLKPENILLGMD----------GLVKLADFGLARFI  148 (225)
T ss_pred             -------------------------------CeecCCCCHHHEEEcCC----------CCEEEeeCceeeEe
Confidence                                           57999999999999854          37899999988654

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PTZ00284 protein kinase; Provisional

Probab=99.21  E-value=3.6e-11  Score=96.95  Aligned_cols=112  Identities=22%  Similarity=0.361  Sum_probs=80.1

Q ss_pred             HHHHHHHHhhcCC------cceEEEeeeeecC-CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428         12 TRHILKELTELHH------ENVVELLHCKESD-QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus        12 ~~~~~~~l~~l~h------~~iv~l~~~~~~~-~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .+.|+.+++.++|      ++++.+.+.+... ...|++++++ ++++..++..++.+++..+..++.+++.++.++|..
T Consensus       172 ~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~  250 (467)
T PTZ00284        172 AKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTE  250 (467)
T ss_pred             HHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            4456666666554      4588888877654 5789999987 667777666667788899999999999999887631


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCC------CCCCCceEEEeeeeccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY------PQPQHIKLKIADFGFAR  156 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~------~~~~~~~~~l~dfg~a~  156 (160)
                                                      .+++||||||+||+++.++....      ..+....+||+|||.+.
T Consensus       251 --------------------------------~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~  296 (467)
T PTZ00284        251 --------------------------------LHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCC  296 (467)
T ss_pred             --------------------------------CCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccc
Confidence                                            15899999999999985431100      00122358999999875

>KOG0696|consensus

Probab=99.19  E-value=4.3e-12  Score=98.95  Aligned_cols=101  Identities=31%  Similarity=0.465  Sum_probs=83.5

Q ss_pred             HHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         13 RHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        13 ~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                      +.|=++|.-- +-|.++.++.+|++.+.+|.||||+.||+|.-.+..-|.+.+.....+..++..++-.+|..       
T Consensus       397 m~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k-------  469 (683)
T KOG0696|consen  397 MVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK-------  469 (683)
T ss_pred             ehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC-------
Confidence            3344444333 56789999999999999999999999999987776668888888888999998888776642       


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                ++|+||+|..||+++..          +++||.|||+++
T Consensus       470 --------------------------gIiYRDLKLDNvmLd~e----------GHiKi~DFGmcK  498 (683)
T KOG0696|consen  470 --------------------------GIIYRDLKLDNVMLDSE----------GHIKIADFGMCK  498 (683)
T ss_pred             --------------------------CeeeeeccccceEeccC----------CceEeeeccccc
Confidence                                      79999999999999854          489999999985

>KOG0664|consensus

Probab=99.19  E-value=2.6e-12  Score=95.58  Aligned_cols=106  Identities=35%  Similarity=0.599  Sum_probs=84.3

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecC-----CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESD-----QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~-----~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .+.-.|+..|...+|.|++..+++.+..     .++|.+.|.+. .++-.-+++-..++...+..+.-+++.+++++|..
T Consensus        97 krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TELmQ-SDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA  175 (449)
T KOG0664|consen   97 KRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTELMQ-SDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA  175 (449)
T ss_pred             HHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHHHH-hhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc
Confidence            3445567777778999999988866533     24677788774 47766666667788889999999999999998864


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                       +++||||||.|+++++          +..+||+|||++|..+
T Consensus       176 ---------------------------------~ILHRDIKPGNLLVNS----------NCvLKICDFGLARvee  207 (449)
T KOG0664|consen  176 ---------------------------------NILHRDIKPGNLLVNS----------NCILKICDFGLARTWD  207 (449)
T ss_pred             ---------------------------------chhhccCCCccEEecc----------CceEEecccccccccc
Confidence                                             6899999999999985          4589999999998654

>KOG1025|consensus

Probab=99.18  E-value=3.3e-12  Score=106.27  Aligned_cols=108  Identities=27%  Similarity=0.427  Sum_probs=88.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      +-..+..|.-++.+|.|||+++|++++.... +-+|++|++.|+|.+|++.+ +.+.......+..|+.+++++++..  
T Consensus       741 ~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q--  817 (1177)
T KOG1025|consen  741 ASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ--  817 (1177)
T ss_pred             hhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc--
Confidence            3344445666678999999999999887654 88999999999999998754 5678888888999999999988753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                     +++||||.++|||+..-          ..+|+.|||+++.+.
T Consensus       818 -------------------------------rlVHrdLaaRNVLVksP----------~hvkitdfgla~ll~  849 (1177)
T KOG1025|consen  818 -------------------------------RLVHRDLAARNVLVKSP----------NHVKITDFGLAKLLA  849 (1177)
T ss_pred             -------------------------------chhhhhhhhhheeecCC----------CeEEEEecchhhccC
Confidence                                           57999999999999853          278999999998664

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.18  E-value=4.5e-11  Score=90.71  Aligned_cols=98  Identities=18%  Similarity=0.360  Sum_probs=68.3

Q ss_pred             HHHhhcCCcceEEEeeeeecCC----cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCcee
Q psy11428         17 KELTELHHENVVELLHCKESDQ----HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVV   92 (160)
Q Consensus        17 ~~l~~l~h~~iv~l~~~~~~~~----~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv   92 (160)
                      ..+..+.|+++++++++.....    ..++++++... ++...+......++..+..+..+++.++.++|..        
T Consensus        75 ~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--------  145 (294)
T PHA02882         75 KNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH--------  145 (294)
T ss_pred             HHhccCCCCCCCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC--------
Confidence            3456679999999998655432    23566665533 2222222223356677778889999999887742        


Q ss_pred             EEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         93 ELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        93 ~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                               +++|||+||+|++++.+          ..++++|||+|+.+
T Consensus       146 -------------------------~iiHrDiKp~Nill~~~----------~~~~l~DFGla~~~  176 (294)
T PHA02882        146 -------------------------GISHGDIKPENIMVDGN----------NRGYIIDYGIASHF  176 (294)
T ss_pred             -------------------------CeecCCCCHHHEEEcCC----------CcEEEEEcCCceee
Confidence                                     58999999999999743          36899999998754

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.17  E-value=6.6e-11  Score=97.10  Aligned_cols=97  Identities=24%  Similarity=0.358  Sum_probs=76.2

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ..+.+|.++++.++|++++............++++||++|+++..++.        ....+..++..++.++|..     
T Consensus       381 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~lH~~-----  447 (535)
T PRK09605        381 ERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAKLHKA-----  447 (535)
T ss_pred             HHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHHHHhC-----
Confidence            457789999999999999887666666677899999999999876542        2344667777888776642     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++|||+||+|++++.           ..++++|||+++..
T Consensus       448 ----------------------------giiHrDlkp~NILl~~-----------~~~~liDFGla~~~  477 (535)
T PRK09605        448 ----------------------------GIVHGDLTTSNFIVRD-----------DRLYLIDFGLGKYS  477 (535)
T ss_pred             ----------------------------CCccCCCChHHEEEEC-----------CcEEEEeCcccccC
Confidence                                        6899999999999942           26889999999754

>smart00090 RIO RIO-like kinase

Probab=99.15  E-value=2.8e-10  Score=84.32  Aligned_cols=101  Identities=23%  Similarity=0.271  Sum_probs=72.8

Q ss_pred             HHHHHHHHHhhcCCcc--eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         11 LTRHILKELTELHHEN--VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~--iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ....|.+.++.+.+..  +..+++   . ...++++|+++|+++.................+..+++.++..+|..    
T Consensus        96 ~~~~E~~~L~~L~~~~i~~p~~~~---~-~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~----  167 (237)
T smart00090       96 WAEKEFRNLQRLYEAGVPVPKPIA---W-RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE----  167 (237)
T ss_pred             HHHHHHHHHHHHHhcCCCCCeeeE---e-cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc----
Confidence            4567888888887532  333443   2 23589999999988876543344455555667788888888887642    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCccc-ceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLAR-IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~-iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                   + ++|+|+||+|++++ .          ..++++|||.+....
T Consensus       168 -----------------------------g~iiH~Dikp~NIli~-~----------~~i~LiDFg~a~~~~  199 (237)
T smart00090      168 -----------------------------GELVHGDLSEYNILVH-D----------GKVVIIDVSQSVELD  199 (237)
T ss_pred             -----------------------------CCEEeCCCChhhEEEE-C----------CCEEEEEChhhhccC
Confidence                                         5 89999999999997 2          268999999987543

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.14  E-value=1e-10  Score=101.66  Aligned_cols=89  Identities=25%  Similarity=0.447  Sum_probs=74.0

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCcee
Q psy11428         13 RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVV   92 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv   92 (160)
                      ..|++++++++||||+++++++.+....|+||||+++|++.+++.   .+++.....++.+++.++.++|..  ..    
T Consensus       731 ~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~--~~----  801 (968)
T PLN00113        731 SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCR--CS----  801 (968)
T ss_pred             HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccC--CC----
Confidence            346888999999999999999999999999999999999988774   366777788888999999887621  01    


Q ss_pred             EEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecC
Q psy11428         93 ELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS  134 (160)
Q Consensus        93 ~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~  134 (160)
                                              .+++|||+||+||+++.+
T Consensus       802 ------------------------~~iiH~dlkp~Nil~~~~  819 (968)
T PLN00113        802 ------------------------PAVVVGNLSPEKIIIDGK  819 (968)
T ss_pred             ------------------------CCeecCCCCHHhEEECCC
Confidence                                    268999999999999743

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.14  E-value=1.1e-10  Score=84.48  Aligned_cols=100  Identities=25%  Similarity=0.344  Sum_probs=75.3

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ....+|.+++..++|+++......+......+++|||++|+++...+....   . ....+..++..++..+|..     
T Consensus        44 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~G~~L~~~~~~~~---~-~~~~i~~~i~~~l~~lH~~-----  114 (211)
T PRK14879         44 ERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSNG---M-EELELSREIGRLVGKLHSA-----  114 (211)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEeCCcCHHHHHHhcc---H-HHHHHHHHHHHHHHHHHhC-----
Confidence            356778899999999988766655556778899999999999876653221   1 4555667777777766542     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                  +++|+|++|.|++++ +          ..++++|||.++.
T Consensus       115 ----------------------------~i~H~Dl~p~Nil~~-~----------~~~~liDf~~a~~  143 (211)
T PRK14879        115 ----------------------------GIIHGDLTTSNMILS-G----------GKIYLIDFGLAEF  143 (211)
T ss_pred             ----------------------------CcccCCCCcccEEEE-C----------CCEEEEECCcccC
Confidence                                        579999999999997 2          2578999998864

>KOG0665|consensus

Probab=99.09  E-value=3.2e-11  Score=91.06  Aligned_cols=101  Identities=36%  Similarity=0.586  Sum_probs=76.3

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCC------cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQ------HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~------~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ++..|+..++.++|+|+++++.+|..+.      .+|+|||++.. ++...+.  -.+.-.+...+.-|.+-+++++|..
T Consensus        61 ra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e~m~~-nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~  137 (369)
T KOG0665|consen   61 RAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVMELMDA-NLCQVIL--MELDHETISYILYQMLCGIKHLHSA  137 (369)
T ss_pred             hhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHHhhhh-HHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhc
Confidence            5677899999999999999999886443      57999998865 3333221  1123345666777888888887653


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                       +++|||+||+|+++..          ...+|+.|||+|+.
T Consensus       138 ---------------------------------~IihRdLkPsnivv~~----------~~~lKi~dfg~ar~  167 (369)
T KOG0665|consen  138 ---------------------------------GIIHRDLKPSNIVVNS----------DCTLKILDFGLART  167 (369)
T ss_pred             ---------------------------------ceeecccCcccceecc----------hhheeeccchhhcc
Confidence                                             7899999999999974          45889999999973

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.09  E-value=2.6e-10  Score=81.82  Aligned_cols=97  Identities=25%  Similarity=0.373  Sum_probs=70.0

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ...++|.++++.++++++....-.+......++++|+++|+++...+.....       .+..++..++..+|..     
T Consensus        42 ~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~-----  109 (199)
T TIGR03724        42 ERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKA-----  109 (199)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHC-----
Confidence            4566889999999887654433333455667999999999988765432111       4566777777776542     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                  +++|+|++|.|++++ +          ..++++|||+++.
T Consensus       110 ----------------------------gi~H~Dl~~~Nil~~-~----------~~~~liDfg~a~~  138 (199)
T TIGR03724       110 ----------------------------GIVHGDLTTSNIIVR-D----------DKLYLIDFGLGKY  138 (199)
T ss_pred             ----------------------------CeecCCCCcceEEEE-C----------CcEEEEECCCCcC
Confidence                                        689999999999997 2          2688999999864

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.08  E-value=3.8e-10  Score=83.03  Aligned_cols=95  Identities=19%  Similarity=0.293  Sum_probs=69.8

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeeec--------CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428         12 TRHILKELTELHHENVVELLHCKES--------DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~~--------~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      +.+|...+.+++||++......+..        .+..+++|||++|.++.+..    ..++.    ...++..++..+|.
T Consensus        82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~~----~~~~i~~~l~~lH~  153 (232)
T PRK10359         82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMP----EISED----VKAKIKASIESLHQ  153 (232)
T ss_pred             HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhh----hccHH----HHHHHHHHHHHHHH
Confidence            5788888999999999998776442        24689999999999887652    12222    23456666666654


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|++|.|++++.+          + ++++|||..+..
T Consensus       154 ~---------------------------------gi~H~Dikp~Nili~~~----------g-i~liDfg~~~~~  184 (232)
T PRK10359        154 H---------------------------------GMVSGDPHKGNFIVSKN----------G-LRIIDLSGKRCT  184 (232)
T ss_pred             c---------------------------------CCccCCCChHHEEEeCC----------C-EEEEECCCcccc
Confidence            2                                 68999999999999732          3 899999977543

>KOG1345|consensus

Probab=99.07  E-value=1e-10  Score=86.93  Aligned_cols=93  Identities=28%  Similarity=0.547  Sum_probs=76.3

Q ss_pred             CCcceEEEee-eeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecC
Q psy11428         23 HHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESD  101 (160)
Q Consensus        23 ~h~~iv~l~~-~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~  101 (160)
                      .|.||+.-++ +|++.+....++|+++-|+|..-+...| +.+........++..++.++|..                 
T Consensus        79 ~H~hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~~~G-igE~~~K~v~~ql~SAi~fMHsk-----------------  140 (378)
T KOG1345|consen   79 PHQHIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVEAAG-IGEANTKKVFAQLLSAIEFMHSK-----------------  140 (378)
T ss_pred             cchhhhHHHHHHhhcCceEEEeeccCccchhhhhcCccc-ccHHHHHHHHHHHHHHHHHhhcc-----------------
Confidence            4889998776 8888899999999999999987766543 67777788888999998887753                 


Q ss_pred             CeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428        102 QHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus       102 ~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                      .++|||+|.+|||+-..        +...+|++|||..+.
T Consensus       141 ----------------nlVHRdlK~eNiLif~~--------df~rvKlcDFG~t~k  172 (378)
T KOG1345|consen  141 ----------------NLVHRDLKAENILIFDA--------DFYRVKLCDFGLTRK  172 (378)
T ss_pred             ----------------chhhcccccceEEEecC--------CccEEEeeecccccc
Confidence                            47999999999999742        345899999998764

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.06  E-value=5.6e-10  Score=82.84  Aligned_cols=104  Identities=22%  Similarity=0.264  Sum_probs=72.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcce--EEEeeeeec-CCc---EEEEEEEeCC-CceeEEEeeecCCCHHHHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENV--VELLHCKES-DQH---VYLVMEFCNG-GDLADYLVSKGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~i--v~l~~~~~~-~~~---~~lv~e~~~~-g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      .....+++|++++..|+|+++  +..++.... ...   .++++|+++| .++.+++.. ..+++..    ..+++.++.
T Consensus        82 ~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~~l~  156 (239)
T PRK01723         82 LERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHGLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQLIA  156 (239)
T ss_pred             hhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecCcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHHHHH
Confidence            344567889999999998875  555554322 222   2599999997 577665533 3444433    345667777


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .+|..                                 +++|+|+||.|++++.+          ..++++|||.+++.
T Consensus       157 ~lH~~---------------------------------GI~HrDlkp~NILv~~~----------~~v~LIDfg~~~~~  192 (239)
T PRK01723        157 RFHDA---------------------------------GVYHADLNAHNILLDPD----------GKFWLIDFDRGELR  192 (239)
T ss_pred             HHHHC---------------------------------CCCCCCCCchhEEEcCC----------CCEEEEECCCcccC
Confidence            76642                                 78999999999999743          26899999998753

>KOG1006|consensus

Probab=99.04  E-value=1.2e-11  Score=91.56  Aligned_cols=103  Identities=26%  Similarity=0.404  Sum_probs=67.2

Q ss_pred             HHHHH-HhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEE-----eeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         14 HILKE-LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-----VSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        14 ~~~~~-l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .|++. ++.-+.|+||+++++.-.++..|++||++.-. +-.+.     +.+..+++..+..+..-.+.++.++...   
T Consensus       111 ~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd~S-lDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~---  186 (361)
T KOG1006|consen  111 MEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMDIS-LDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE---  186 (361)
T ss_pred             HHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHhhh-HHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH---
Confidence            34443 45558999999999999999999999988532 21111     1123444444333332233344443221   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                   ..+||||+||+|||++..          +.+|++|||++..+.
T Consensus       187 -----------------------------lkiIHRDvKPSNILldr~----------G~vKLCDFGIcGqLv  219 (361)
T KOG1006|consen  187 -----------------------------LKIIHRDVKPSNILLDRH----------GDVKLCDFGICGQLV  219 (361)
T ss_pred             -----------------------------hhhhhccCChhheEEecC----------CCEeeecccchHhHH
Confidence                                         158999999999999854          489999999987654

>KOG2052|consensus

Probab=99.02  E-value=2.9e-10  Score=89.15  Aligned_cols=100  Identities=30%  Similarity=0.498  Sum_probs=73.6

Q ss_pred             hcCCcceEEEeeeeecC----CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEee
Q psy11428         21 ELHHENVVELLHCKESD----QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLH   96 (160)
Q Consensus        21 ~l~h~~iv~l~~~~~~~----~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~   96 (160)
                      -|+|+||+.++++=...    .+++++.||-+.|+|.+|+... .+.-.....+.-.++.++.++|.             
T Consensus       261 mLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~-tv~~~~ml~LalS~AsGLaHLH~-------------  326 (513)
T KOG2052|consen  261 MLRHENILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRN-TVTTEGMLKLALSIASGLAHLHM-------------  326 (513)
T ss_pred             HhccchhhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhc-cCCHHHHHHHHHHHhhhHHHHHH-------------
Confidence            46999999998754322    3579999999999999998763 34444444455566677777763             


Q ss_pred             eeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         97 CKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        97 ~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                  |-.+..--+.+.|||+|+.|||+.+|          +.+-|+|+|+|.
T Consensus       327 ------------eI~GTqgKPaIAHRDlKSKNILVKkn----------~~C~IADLGLAv  364 (513)
T KOG2052|consen  327 ------------EIVGTQGKPAIAHRDLKSKNILVKKN----------GTCCIADLGLAV  364 (513)
T ss_pred             ------------HHhcCCCCchhhccccccccEEEccC----------CcEEEeeceeeE
Confidence                        22222333578999999999999855          488999999984

>KOG1167|consensus

Probab=98.99  E-value=7.3e-10  Score=86.11  Aligned_cols=106  Identities=31%  Similarity=0.523  Sum_probs=82.9

Q ss_pred             ccchhHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          3 TQSKSSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         3 ~~~~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      |++.+.+.   .|++.|..+ .+.||+.+.+++..++.+.+|++|++..+..+++.   .++-..+..+...+..++..+
T Consensus        75 ts~p~ri~---~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~  148 (418)
T KOG1167|consen   75 TSSPSRIL---NELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHL  148 (418)
T ss_pred             ccCchHHH---HHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhh
Confidence            55555554   566666555 58899999999999999999999999877665543   345677788888888888876


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      |..                                 +++|||+||.|++.+...         +.-.|.|||+|.
T Consensus       149 h~~---------------------------------GIvHRDiKpsNFL~n~~t---------~rg~LvDFgLA~  181 (418)
T KOG1167|consen  149 HKN---------------------------------GIVHRDIKPSNFLYNRRT---------QRGVLVDFGLAQ  181 (418)
T ss_pred             hcc---------------------------------CccccCCCcccccccccc---------CCceEEechhHH
Confidence            542                                 799999999999998644         345799999985

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.98  E-value=3.4e-09  Score=76.20  Aligned_cols=95  Identities=23%  Similarity=0.249  Sum_probs=65.8

Q ss_pred             HHHHHHHHHhhcCCcc--eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         11 LTRHILKELTELHHEN--VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~--iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ....|...+..+.+++  +...++    ....++++||++|+++......      ........++..++..+|.     
T Consensus        79 ~~~~E~~~l~~l~~~~i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~------~~~~~~~~~i~~~l~~lh~-----  143 (198)
T cd05144          79 AAQKEFAALKALYEEGFPVPKPID----WNRHAVVMEYIDGVELYRVRVL------EDPEEVLDEILEEIVKAYK-----  143 (198)
T ss_pred             HHHHHHHHHHHHHHcCCCCCceee----cCCceEEEEEeCCcchhhcccc------ccHHHHHHHHHHHHHHHHH-----
Confidence            4677888888887774  444433    3456999999999988754321      1233445566666655543     


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  .+++|+|++|.|++++.+          ..++++|||++.-+
T Consensus       144 ----------------------------~gi~H~Dl~p~Nill~~~----------~~~~liDfg~~~~~  175 (198)
T cd05144         144 ----------------------------HGIIHGDLSEFNILVDDD----------EKIYIIDWPQMVST  175 (198)
T ss_pred             ----------------------------CCCCcCCCCcccEEEcCC----------CcEEEEECCccccC
Confidence                                        268999999999999743          37899999998544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.92  E-value=1.5e-08  Score=68.40  Aligned_cols=102  Identities=28%  Similarity=0.371  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHhhcCC--cceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHH--ENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h--~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+.+|...++.+++  +++++++.....++..++++|++.++.+...       +.........++.+.+..+|...  
T Consensus        36 ~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~--  106 (155)
T cd05120          36 ADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLP--  106 (155)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCC--
Confidence            456778888888876  5888888888777889999999988777543       33444555666667776655310  


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  ..+++|+|++|.|++++..          ..+++.|||.++..
T Consensus       107 ----------------------------~~~i~H~Dl~~~Nil~~~~----------~~~~l~Df~~~~~~  139 (155)
T cd05120         107 ----------------------------LLVLCHGDLHPGNILVDDG----------KILGIIDWEYAGYG  139 (155)
T ss_pred             ----------------------------ceEEEecCCCcceEEEECC----------cEEEEEecccccCC
Confidence                                        0258999999999999742          37899999998753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=98.92  E-value=1.8e-09  Score=87.92  Aligned_cols=100  Identities=27%  Similarity=0.373  Sum_probs=69.5

Q ss_pred             HHHHHhhcCCcce-----EEEeeeee--------cCCcEEEEEEEeCCCceeEEEeeec---------------------
Q psy11428         15 ILKELTELHHENV-----VELLHCKE--------SDQHVYLVMEFCNGGDLADYLVSKG---------------------   60 (160)
Q Consensus        15 ~~~~l~~l~h~~i-----v~l~~~~~--------~~~~~~lv~e~~~~g~l~~~l~~~~---------------------   60 (160)
                      |...+.+++|.++     +++++.+.        ..+..++|+||+++++|.+++....                     
T Consensus       222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~  301 (507)
T PLN03224        222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM  301 (507)
T ss_pred             HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence            4555666766654     44444443        2356899999999999877654211                     


Q ss_pred             ---CCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCC
Q psy11428         61 ---TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK  137 (160)
Q Consensus        61 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~  137 (160)
                         .........+..+++.++.++|..                                 +++|||+||+||+++.+   
T Consensus       302 ~~~~~~~~~~~~i~~ql~~aL~~lH~~---------------------------------~ivHrDLKp~NILl~~~---  345 (507)
T PLN03224        302 PQDKRDINVIKGVMRQVLTGLRKLHRI---------------------------------GIVHRDIKPENLLVTVD---  345 (507)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHHHHC---------------------------------CeecCCCchHhEEECCC---
Confidence               112344556777888888877642                                 58999999999999743   


Q ss_pred             CCCCCCCceEEEeeeecccc
Q psy11428        138 QYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus       138 ~~~~~~~~~~~l~dfg~a~~  157 (160)
                             ..++++|||+++.
T Consensus       346 -------~~~kL~DFGla~~  358 (507)
T PLN03224        346 -------GQVKIIDFGAAVD  358 (507)
T ss_pred             -------CcEEEEeCcCccc
Confidence                   3789999999864

>KOG0671|consensus

Probab=98.88  E-value=7.7e-09  Score=79.84  Aligned_cols=115  Identities=24%  Similarity=0.340  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHhhcC-Cc-----ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHh
Q psy11428         10 VLTRHILKELTELH-HE-----NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus        10 ~~~~~~~~~l~~l~-h~-----~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      .+++-|+++|.++. +.     -.+.+.+.|...+.+|+|+|.+ |.++.+++.+.  .+++...++.+..|+++++..+
T Consensus       130 eAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fL  208 (415)
T KOG0671|consen  130 EAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFL  208 (415)
T ss_pred             hHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHH
Confidence            45667888899883 22     2455667899999999999987 55777777654  3578899999999999999988


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCC-------CC-C--CCCCCceEEEee
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG-------KQ-Y--PQPQHIKLKIAD  151 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~-------~~-~--~~~~~~~~~l~d  151 (160)
                      |..                                 +++|-|+||+||++.++.-       +. +  ...++..++++|
T Consensus       209 h~~---------------------------------kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vID  255 (415)
T KOG0671|consen  209 HDL---------------------------------KLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVID  255 (415)
T ss_pred             Hhc---------------------------------ceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEe
Confidence            753                                 6899999999999875321       00 0  112356689999


Q ss_pred             eeccccc
Q psy11428        152 FGFARFL  158 (160)
Q Consensus       152 fg~a~~~  158 (160)
                      ||.|.+-
T Consensus       256 FGsAtf~  262 (415)
T KOG0671|consen  256 FGSATFD  262 (415)
T ss_pred             cCCccee
Confidence            9999764

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.86  E-value=2.7e-09  Score=88.22  Aligned_cols=82  Identities=35%  Similarity=0.515  Sum_probs=60.1

Q ss_pred             ecCCcEEEEEEEeCCCceeEEEeeecC--------------------CCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEE
Q psy11428         35 ESDQHVYLVMEFCNGGDLADYLVSKGT--------------------LSEDTIRIFLKQIVQALKAFQVKELHHENVVEL   94 (160)
Q Consensus        35 ~~~~~~~lv~e~~~~g~l~~~l~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   94 (160)
                      ......+++++|++++++.+++.....                    .....+..+..+++.++.++|..          
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~----------  274 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST----------  274 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC----------
Confidence            456789999999999988766543210                    11223455777888888887642          


Q ss_pred             eeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         95 LHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        95 ~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                             +++||||||+||+++.+         ...+||+|||+|+.+
T Consensus       275 -----------------------gIiHRDLKP~NILl~~~---------~~~~KL~DFGlA~~l  306 (566)
T PLN03225        275 -----------------------GIVHRDVKPQNIIFSEG---------SGSFKIIDLGAAADL  306 (566)
T ss_pred             -----------------------CEEeCcCCHHHEEEeCC---------CCcEEEEeCCCcccc
Confidence                                   68999999999999742         237899999999754

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=98.82  E-value=2.2e-08  Score=74.66  Aligned_cols=108  Identities=38%  Similarity=0.613  Sum_probs=86.7

Q ss_pred             HHHHHHHHHHHHhhcCCc-ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec---CCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          8 SIVLTRHILKELTELHHE-NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG---TLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~-~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ....+..|..+++.+.|+ +++++.+.+......+++++++.++.+...+....   .+.......+..+++.++.++|.
T Consensus        40 ~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~  119 (384)
T COG0515          40 EVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHS  119 (384)
T ss_pred             HHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            356677888899999988 79999999988777899999999999885544333   57788888888999888776654


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      .                                 +++|||+||+|++++...         ..+++.|||.++.
T Consensus       120 ~---------------------------------~~~hrd~kp~nil~~~~~---------~~~~l~dfg~~~~  151 (384)
T COG0515         120 K---------------------------------GIIHRDIKPENILLDRDG---------RVVKLIDFGLAKL  151 (384)
T ss_pred             C---------------------------------CeeccCCCHHHeeecCCC---------CeEEEeccCccee
Confidence            2                                 479999999999997432         1579999999863

>KOG1035|consensus

Probab=98.80  E-value=1.8e-09  Score=93.17  Aligned_cols=77  Identities=32%  Similarity=0.530  Sum_probs=61.4

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCC-CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      ..+|+-||||+...+.+.+...... .....+.+++++++++.+.|.                                 
T Consensus       669 ~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~---------------------------------  715 (1351)
T KOG1035|consen  669 LILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD---------------------------------  715 (1351)
T ss_pred             eEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh---------------------------------
Confidence            3478999999887777766554433 355677788999999999875                                 


Q ss_pred             ccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428        117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus       117 ~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      .++||||+||.||+++.+          ..+||+|||+|..
T Consensus       716 ~giIHRDLKP~NIFLd~~----------~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  716 QGIIHRDLKPRNIFLDSR----------NSVKIGDFGLATD  746 (1351)
T ss_pred             CceeeccCCcceeEEcCC----------CCeeecccccchh
Confidence            268999999999999854          3799999999975

>KOG0670|consensus

Probab=98.80  E-value=2e-09  Score=86.25  Aligned_cols=103  Identities=30%  Similarity=0.424  Sum_probs=79.0

Q ss_pred             HHHHHHHhhcCC------cceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee---cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428         13 RHILKELTELHH------ENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK---GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus        13 ~~~~~~l~~l~h------~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ..|+++|++|+.      .|.++|+..|.....+|+|+|.+.- +|...++.-   -.+....++.+..|+.-+++.+..
T Consensus       476 l~EleiLkKL~~AD~Edk~Hclrl~r~F~hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~  554 (752)
T KOG0670|consen  476 LKELEILKKLNDADPEDKFHCLRLFRHFKHKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKK  554 (752)
T ss_pred             hHHHHHHHHhhccCchhhhHHHHHHHHhhhcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHh
Confidence            458999999853      2788999999999999999997643 444333322   245677889999999888887643


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       .+++|.||||.|||++.+         ...+||+|||.|.+.
T Consensus       555 ---------------------------------c~vlHaDIKPDNiLVNE~---------k~iLKLCDfGSA~~~  587 (752)
T KOG0670|consen  555 ---------------------------------CGVLHADIKPDNILVNES---------KNILKLCDFGSASFA  587 (752)
T ss_pred             ---------------------------------cCeeecccCccceEeccC---------cceeeeccCcccccc
Confidence                                             268999999999999853         346899999998764

>PLN00181 protein SPA1-RELATED; Provisional

Probab=98.78  E-value=1.7e-09  Score=92.61  Aligned_cols=104  Identities=19%  Similarity=0.224  Sum_probs=72.9

Q ss_pred             HhhcCC-cceEEEeeee-------ecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         19 LTELHH-ENVVELLHCK-------ESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        19 l~~l~h-~~iv~l~~~~-------~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ++.++| +||.++++.+       .....++.++|+. +++|..++.. .+.+++.....++.|++.++.++|..     
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~-----   99 (793)
T PLN00181         26 SKSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ-----   99 (793)
T ss_pred             cchhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC-----
Confidence            456677 5777787766       2223567777876 5688887754 34578889999999999999988753     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCC----------CCCCCceEEEeeeecccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY----------PQPQHIKLKIADFGFARF  157 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~----------~~~~~~~~~l~dfg~a~~  157 (160)
                                                  +++||||||+|||++..+ ...          ..+....+|++|||+++.
T Consensus       100 ----------------------------gIvHrDlKP~NiLl~~~~-~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~  148 (793)
T PLN00181        100 ----------------------------GIVVHNVRPSCFVMSSFN-HVSFIESASCSDSGSDEDATTKSREIGSSRR  148 (793)
T ss_pred             ----------------------------CeeeccCCchhEEEcccC-cEEEeeccccCcccccccCcccccccccccc
Confidence                                        689999999999996321 000          001234678888888763

>KOG1164|consensus

Probab=98.74  E-value=1.8e-08  Score=77.83  Aligned_cols=106  Identities=27%  Similarity=0.439  Sum_probs=78.5

Q ss_pred             HHHHHHHHhhcC----CcceEEEeeee-ecCCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428         12 TRHILKELTELH----HENVVELLHCK-ESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus        12 ~~~~~~~l~~l~----h~~iv~l~~~~-~~~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ...|..++..+.    .+++..+.+.. ..+..-|+||+.+ |.+|.+....  .+.++..++..+..+.+.++..+|..
T Consensus        63 l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~  141 (322)
T KOG1164|consen   63 LKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK  141 (322)
T ss_pred             chhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc
Confidence            334555555554    25888888888 5778899999977 6677664322  25688889999999999999987753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                       +++|||+||.|++++....     .....+.+.|||+++
T Consensus       142 ---------------------------------G~iHRDiKp~N~~~g~~~~-----~~~~~~~llDfGlar  175 (322)
T KOG1164|consen  142 ---------------------------------GFIHRDIKPENFVVGQSSR-----SEVRTLYLLDFGLAR  175 (322)
T ss_pred             ---------------------------------CcccCCcCHHHeeecCCCC-----cccceEEEEecCCCc
Confidence                                             7899999999999985320     112468999999998

>KOG1165|consensus

Probab=98.67  E-value=3e-08  Score=75.86  Aligned_cols=111  Identities=23%  Similarity=0.345  Sum_probs=80.0

Q ss_pred             HHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         11 LTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        11 ~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+-|.+..+.| ..++|...+..-+.+..-.+|+|++ |.+|.+...-. +.++..++..+..|++..+.++|..    
T Consensus        69 QLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k----  143 (449)
T KOG1165|consen   69 QLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK----  143 (449)
T ss_pred             hHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc----
Confidence            445566666666 4678888777666677778999987 45554433322 3578888888889998888877653    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccCC
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD  160 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~~  160 (160)
                                                   .+|+||+||+|.||+..+     ..+...+.++|||+|+...|
T Consensus       144 -----------------------------~LIYRDIKPdNFLIGrp~-----~k~~n~IhiiDFGmAK~YrD  181 (449)
T KOG1165|consen  144 -----------------------------DLIYRDIKPDNFLIGRPG-----TKDANVIHIIDFGMAKEYRD  181 (449)
T ss_pred             -----------------------------ceeecccCccceeecCCC-----CCCCceEEEEeccchhhhcC
Confidence                                         479999999999998643     23345678999999986543

>KOG1163|consensus

Probab=98.64  E-value=5.5e-08  Score=71.59  Aligned_cols=110  Identities=21%  Similarity=0.399  Sum_probs=75.3

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe-eecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      +..+..+....++|+.  -..|..+.........-.+|||.. |.+|.+... -.+.++..++..+..|++..+.++|..
T Consensus        54 hpqL~yEskvY~iL~~--g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r  130 (341)
T KOG1163|consen   54 HPQLLYESKVYRILQG--GVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR  130 (341)
T ss_pred             CcchhHHHHHHHHhcc--CCCCchhhhhccccccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh
Confidence            3445555666666542  335555555566677788999988 455544321 124577788888888888888877653


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       .+|||||||+|.|++-..       ....+.++|||+|+..
T Consensus       131 ---------------------------------~fiHRDIKPdNFLMGlgr-------h~~kl~LIDFGLaKky  164 (341)
T KOG1163|consen  131 ---------------------------------NFIHRDIKPDNFLMGLGR-------HCNKLYLIDFGLAKKY  164 (341)
T ss_pred             ---------------------------------ccccccCCccceeecccc-------ccceEEEEeccchhhh
Confidence                                             579999999999997432       2345789999999643

>KOG0590|consensus

Probab=98.62  E-value=7.8e-09  Score=85.80  Aligned_cols=101  Identities=31%  Similarity=0.449  Sum_probs=82.6

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCcee
Q psy11428         13 RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVV   92 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv   92 (160)
                      ..|+.+-..++|||++.....+......+-.|||+++ |+...+...+.+......-+.+|++.+++++|..        
T Consensus       369 ~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~--------  439 (601)
T KOG0590|consen  369 TSEFCIGSSLSHPNIIETLDIVQEIDGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM--------  439 (601)
T ss_pred             hhheeecccccCCchhhhHHHHhhcccchhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc--------
Confidence            3455555678999999887777666666666999999 9988887766788888888999999999988752        


Q ss_pred             EEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         93 ELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        93 ~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                               ++.|||+|++|++++.++          .+|++|||.+..
T Consensus       440 -------------------------GiahrdlK~enll~~~~g----------~lki~Dfg~~~v  469 (601)
T KOG0590|consen  440 -------------------------GLAHRDLKLENLLVTENG----------ILKIIDFGAASV  469 (601)
T ss_pred             -------------------------CceeccCccccEEEecCC----------ceEEeecCccee
Confidence                                     789999999999998653          789999998753

>cd05119 RIO RIO kinase family, catalytic domain

Probab=98.61  E-value=1.9e-07  Score=66.14  Aligned_cols=98  Identities=24%  Similarity=0.296  Sum_probs=59.6

Q ss_pred             HHHHHHHhhcCCcc--eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         13 RHILKELTELHHEN--VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        13 ~~~~~~l~~l~h~~--iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      ..|.+.+..+.+..  +.+.+++    ...++++||++++.+........... .....+..+++.++..++..      
T Consensus        65 ~~e~~~l~~l~~~~~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~------  133 (187)
T cd05119          65 EKEFRNLKRLYEAGVPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYRE------  133 (187)
T ss_pred             HHHHHHHHHHHHcCCCCCceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhc------
Confidence            45555666654433  3334432    23589999999965432111110011 34455666677776665431      


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                .+++|+|++|+|++++ ++          .++++|||.++..
T Consensus       134 --------------------------~~ivH~Dl~p~Nili~-~~----------~~~liDfg~a~~~  164 (187)
T cd05119         134 --------------------------AGLVHGDLSEYNILVD-DG----------KVYIIDVPQAVEI  164 (187)
T ss_pred             --------------------------cCcCcCCCChhhEEEE-CC----------cEEEEECcccccc
Confidence                                      1589999999999997 32          6899999998644

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.57  E-value=3.8e-07  Score=65.68  Aligned_cols=100  Identities=17%  Similarity=0.251  Sum_probs=64.1

Q ss_pred             HHHHHHHHHhhcCCc--ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh-hhhhcC
Q psy11428         11 LTRHILKELTELHHE--NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF-QVKELH   87 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~--~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~   87 (160)
                      .++.|.+.|+++...  ++...+..    ..-+++||++.++.+..-.......++........+++..+..+ |.    
T Consensus        72 wa~kE~r~L~rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~----  143 (197)
T cd05146          72 WAEKEMHNLKRMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKE----  143 (197)
T ss_pred             HHHHHHHHHHHHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHh----
Confidence            345899998888644  44555543    45789999998765432211122333334444555666666543 22    


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   .+++|+|+++.|+++..           ..+.++|||.+-..
T Consensus       144 -----------------------------~glVHGDLs~~NIL~~~-----------~~v~iIDF~qav~~  174 (197)
T cd05146         144 -----------------------------CNLVHADLSEYNMLWHD-----------GKVWFIDVSQSVEP  174 (197)
T ss_pred             -----------------------------CCeecCCCCHHHEEEEC-----------CcEEEEECCCceeC
Confidence                                         26899999999999963           25789999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.55  E-value=1.9e-07  Score=66.25  Aligned_cols=97  Identities=27%  Similarity=0.362  Sum_probs=61.0

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      +.+.|.+++.+++-..|..-.=...+.+.-.++|||.+|..+.+.+...       ...++..+-..+..+|.       
T Consensus        45 Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~-------~~~~~r~vG~~vg~lH~-------  110 (204)
T COG3642          45 RTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA-------RPDLLREVGRLVGKLHK-------  110 (204)
T ss_pred             HHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc-------chHHHHHHHHHHHHHHh-------
Confidence            4556666666665444443222233456678999999998887665433       12223333333333332       


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                .+++|+|+.++|++++..           .+.++|||++.+-
T Consensus       111 --------------------------~givHGDLTtsNiIl~~~-----------~i~~IDfGLg~~s  141 (204)
T COG3642         111 --------------------------AGIVHGDLTTSNIILSGG-----------RIYFIDFGLGEFS  141 (204)
T ss_pred             --------------------------cCeecCCCccceEEEeCC-----------cEEEEECCccccc
Confidence                                      279999999999999732           4789999999753

>KOG0595|consensus

Probab=98.53  E-value=4.3e-07  Score=70.85  Aligned_cols=39  Identities=56%  Similarity=1.097  Sum_probs=36.0

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      .+.|||||++++..+..+.+|+|||||.||||..++++-
T Consensus        65 el~H~nIV~l~d~~~~~~~i~lVMEyC~gGDLs~yi~~~  103 (429)
T KOG0595|consen   65 ELKHPNIVRLLDCIEDDDFIYLVMEYCNGGDLSDYIRRR  103 (429)
T ss_pred             hcCCcceeeEEEEEecCCeEEEEEEeCCCCCHHHHHHHc
Confidence            477999999999999999999999999999998888764

>KOG4158|consensus

Probab=98.49  E-value=1.8e-07  Score=73.28  Aligned_cols=92  Identities=33%  Similarity=0.495  Sum_probs=61.6

Q ss_pred             CCcceEEEeeeeec---------------------------CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHH
Q psy11428         23 HHENVVELLHCKES---------------------------DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV   75 (160)
Q Consensus        23 ~h~~iv~l~~~~~~---------------------------~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~   75 (160)
                      .|||||+.++.|.+                           +..+|+||..++- +|..++..+ ..+-.....+..|++
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~-~~s~r~~~~~laQlL  351 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR-HRSYRTGRVILAQLL  351 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC-CCchHHHHHHHHHHH
Confidence            69999998876643                           2345555554422 333333222 233445566788899


Q ss_pred             HHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecc
Q psy11428         76 QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA  155 (160)
Q Consensus        76 ~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a  155 (160)
                      +++.+++..                                 ++.|||+|++||++.-      ++|.--.+.++|||.+
T Consensus       352 Eav~hL~~h---------------------------------gvAhRDlKSDNiL~El------ddD~~P~LVvaDFGCc  392 (598)
T KOG4158|consen  352 EAVTHLHKH---------------------------------GVAHRDLKSDNILLEL------DDDEIPQLVVADFGCC  392 (598)
T ss_pred             HHHHHHHHc---------------------------------cchhhcccccceEEEe------cCCCCcEEEEccccee
Confidence            998877542                                 6899999999999973      2345567899999976

>KOG0603|consensus

Probab=98.45  E-value=9.5e-08  Score=77.87  Aligned_cols=104  Identities=28%  Similarity=0.420  Sum_probs=83.7

Q ss_pred             HHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         12 TRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        12 ~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      .+.|-.++..++ ||.++++..+++..+..+++.++..||++...+.....+.+.....+..+++-++...+.       
T Consensus        43 t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~-------  115 (612)
T KOG0603|consen   43 TKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHK-------  115 (612)
T ss_pred             cccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcch-------
Confidence            344555666676 999999999999999999999999999999887766667777777777777666655432       


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                .++++||+|++||+++.+          +.+++.|||+++.+
T Consensus       116 --------------------------l~iiyrd~k~enilld~~----------Ghi~~tdfglske~  147 (612)
T KOG0603|consen  116 --------------------------LGIAYRDYKLENVLLLLE----------GHIKLTDFGLSKEA  147 (612)
T ss_pred             --------------------------hHHHHhcccccceeeccc----------CccccCCchhhhHh
Confidence                                      268999999999999854          48899999998753

>KOG1166|consensus

Probab=98.44  E-value=1.6e-07  Score=80.84  Aligned_cols=93  Identities=23%  Similarity=0.387  Sum_probs=76.5

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      |..+..+...++...++++|.+-|+|.+.+...+.+.+..+..+..+++..+..+|.                       
T Consensus       756 ~~~~~~a~~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~-----------------------  812 (974)
T KOG1166|consen  756 IMHISSAHVFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHA-----------------------  812 (974)
T ss_pred             hHHHHHHHccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHh-----------------------
Confidence            444455667788899999999999999998877888999999999999999888775                       


Q ss_pred             EEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecc
Q psy11428        107 VMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA  155 (160)
Q Consensus       107 ~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a  155 (160)
                                .+|||+||||+|.++....-.   ++....++|+|||.+
T Consensus       813 ----------~~IIHgDiKPDNfll~~~~~~---~~~~~~l~lIDfG~s  848 (974)
T KOG1166|consen  813 ----------MGIIHGDIKPDNFLLRREICA---DSDSKGLYLIDFGRS  848 (974)
T ss_pred             ----------cceecccCCcceeEeecccCC---CCcccceEEEecccc
Confidence                      379999999999999854322   334678899999987

>KOG3087|consensus

Probab=98.43  E-value=4.3e-07  Score=64.54  Aligned_cols=107  Identities=20%  Similarity=0.271  Sum_probs=66.9

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCC-CceeEEEeeecC--CCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNG-GDLADYLVSKGT--LSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~-g~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .+..+|.+.|.+++--.|..-.=.+.+...-++.|||++| .++.+++.....  ..+.....+...+-+.+..+|..  
T Consensus        55 ~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n--  132 (229)
T KOG3087|consen   55 KRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN--  132 (229)
T ss_pred             HHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC--
Confidence            3456677777777655554433344455666788999987 355555443221  12222234555555555554432  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                     +++|+|+.++|+++.+.+       ....+.++|||++.
T Consensus       133 -------------------------------diiHGDLTTSNill~~~~-------~~~~~~lIdfgls~  164 (229)
T KOG3087|consen  133 -------------------------------DIIHGDLTTSNILLRSDG-------NQITPILIDFGLSS  164 (229)
T ss_pred             -------------------------------CeecccccccceEEecCC-------CcCceEEEeecchh
Confidence                                           689999999999998654       33466899999975

>cd05151 ChoK Choline Kinase (ChoK)

Probab=98.38  E-value=2.4e-06  Score=59.38  Aligned_cols=98  Identities=22%  Similarity=0.248  Sum_probs=61.5

Q ss_pred             HHHHHHHHHhhcCCcceE-EEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         11 LTRHILKELTELHHENVV-ELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv-~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ....|.+.++.+...+++ +++....  ...++++|+++|.++...     ...   ......++.+.+..+|.....  
T Consensus        38 ~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l~~~-----~~~---~~~~~~~l~~~l~~LH~~~~~--  105 (170)
T cd05151          38 NRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSELLTE-----DFS---DPENLEKIAKLLKKLHSSPLP--  105 (170)
T ss_pred             CHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCccccc-----ccc---CHHHHHHHHHHHHHHhCCCCC--
Confidence            456777777777554443 4454432  335799999999887642     011   122334566666665532111  


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                -..++|+|++|.|++++.           ..++++|||.+..
T Consensus       106 --------------------------~~~~~HgD~~~~Nil~~~-----------~~~~liDf~~a~~  136 (170)
T cd05151         106 --------------------------DLVPCHNDLLPGNFLLDD-----------GRLWLIDWEYAGM  136 (170)
T ss_pred             --------------------------CceeecCCCCcCcEEEEC-----------CeEEEEecccccC
Confidence                                      024699999999999972           2578999998753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1024|consensus

Probab=98.33  E-value=1.3e-06  Score=68.37  Aligned_cols=111  Identities=18%  Similarity=0.317  Sum_probs=83.3

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeee-ecCCcEEEEEEEeCCCceeEEEee------e--cCCCHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCK-ESDQHVYLVMEFCNGGDLADYLVS------K--GTLSEDTIRIFLKQIV   75 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~-~~~~~~~lv~e~~~~g~l~~~l~~------~--~~~~~~~~~~~~~~~~   75 (160)
                      |+=.+.++-+|-..|..+.|||+..+.++. ++..+.+.++.+...|+|..++.-      .  ..+.......+..|+.
T Consensus       327 S~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla  406 (563)
T KOG1024|consen  327 SQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLA  406 (563)
T ss_pred             cHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHH
Confidence            344567788888889999999999998844 456778888999988988877651      1  1223344555667777


Q ss_pred             HHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecc
Q psy11428         76 QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA  155 (160)
Q Consensus        76 ~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a  155 (160)
                      -++.++|..                                 +++|.||.++|++++          +...+|++|-.++
T Consensus       407 ~am~hlh~~---------------------------------~ViHkDiAaRNCvId----------d~LqVkltDsaLS  443 (563)
T KOG1024|consen  407 MAMEHLHNH---------------------------------GVIHKDIAARNCVID----------DQLQVKLTDSALS  443 (563)
T ss_pred             HHHHHHHhc---------------------------------Ccccchhhhhcceeh----------hheeEEeccchhc
Confidence            777776542                                 689999999999997          3468999999998


Q ss_pred             ccc
Q psy11428        156 RFL  158 (160)
Q Consensus       156 ~~~  158 (160)
                      |.+
T Consensus       444 RDL  446 (563)
T KOG1024|consen  444 RDL  446 (563)
T ss_pred             ccc
Confidence            854

>KOG1290|consensus

Probab=98.23  E-value=1.6e-06  Score=69.24  Aligned_cols=95  Identities=26%  Similarity=0.402  Sum_probs=72.9

Q ss_pred             hHHHHHHHHHHHHhhcC-----C---cceEEEeeeee----cCCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELH-----H---ENVVELLHCKE----SDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLK   72 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~-----h---~~iv~l~~~~~----~~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~   72 (160)
                      +=..++..|+++|++++     |   ..||+|++-|.    -+..+|+|+|++ |.+|...+..  .+.++...++.++.
T Consensus       116 hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~  194 (590)
T KOG1290|consen  116 HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICR  194 (590)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHH
Confidence            33456777999998873     2   26999988665    335789999998 4455555443  35688899999999


Q ss_pred             HHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecC
Q psy11428         73 QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS  134 (160)
Q Consensus        73 ~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~  134 (160)
                      +++.++.++|..                                .++||-||||+|||+..+
T Consensus       195 qvL~GLdYLH~e--------------------------------cgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  195 QVLTGLDYLHRE--------------------------------CGIIHTDLKPENVLLCST  224 (590)
T ss_pred             HHHHHHHHHHHh--------------------------------cCccccCCCcceeeeecc
Confidence            999999998753                                279999999999999854

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.22  E-value=3.1e-06  Score=68.08  Aligned_cols=32  Identities=34%  Similarity=0.509  Sum_probs=26.9

Q ss_pred             cceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428        118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus       118 ~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                      +++|+|++|.|++++.+          +.++++|||+++.++
T Consensus       277 g~~H~D~hPgNilv~~~----------g~i~liDfG~~~~l~  308 (437)
T TIGR01982       277 GFFHADLHPGNIFVLKD----------GKIIALDFGIVGRLS  308 (437)
T ss_pred             CceeCCCCcccEEECCC----------CcEEEEeCCCeeECC
Confidence            68999999999999743          378999999987654

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG1023|consensus

Probab=98.21  E-value=1.9e-06  Score=69.54  Aligned_cols=98  Identities=27%  Similarity=0.452  Sum_probs=78.9

Q ss_pred             HhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeee
Q psy11428         19 LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHC   97 (160)
Q Consensus        19 l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~   97 (160)
                      |+.+.|.|+.++.+.+..+...+.+.++++-|++.+.+.... .+.......+.+.++.++.++|.+.            
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~------------   68 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSP------------   68 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCc------------
Confidence            467899999999999999999999999999999998776532 2345556667788888888876532            


Q ss_pred             eecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         98 KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        98 ~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                          -..|+.+++.|++++.          +..+|++|||+....
T Consensus        69 --------------------i~~hg~l~s~nClvd~----------~w~lklt~~Gl~~~~   99 (484)
T KOG1023|consen   69 --------------------IGYHGALKSSNCLVDS----------RWVLKLTDFGLNSLL   99 (484)
T ss_pred             --------------------ceeeeeeccccceeee----------eEEEEechhhhcccc
Confidence                                1379999999999984          458999999998765

>KOG0611|consensus

Probab=98.19  E-value=2.5e-06  Score=67.22  Aligned_cols=81  Identities=19%  Similarity=0.412  Sum_probs=58.1

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      -+.+-+.+|...|..++.+...+..+....-..-+...++.+     +.|+||||++++.+|+..+.+.++|||+.+|.|
T Consensus        66 YGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIM-----SsLNHPhII~IyEVFENkdKIvivMEYaS~GeL  140 (668)
T KOG0611|consen   66 YGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIM-----SSLNHPHIIQIYEVFENKDKIVIVMEYASGGEL  140 (668)
T ss_pred             ccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHH-----hhcCCCceeehhhhhcCCceEEEEEEecCCccH
Confidence            356777788787877777766554443332222222223332     358999999999999999999999999999999


Q ss_pred             ccceec
Q psy11428        117 ARIVHR  122 (160)
Q Consensus       117 ~~iih~  122 (160)
                      +++|.+
T Consensus       141 YDYiSe  146 (668)
T KOG0611|consen  141 YDYISE  146 (668)
T ss_pred             HHHHHH
Confidence            887653

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=98.18  E-value=3.8e-06  Score=69.00  Aligned_cols=90  Identities=24%  Similarity=0.385  Sum_probs=55.6

Q ss_pred             CcceEEEeeeeec-CCcEEEEEEEeCCCceeEE--Eeeec----CCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEee
Q psy11428         24 HENVVELLHCKES-DQHVYLVMEFCNGGDLADY--LVSKG----TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLH   96 (160)
Q Consensus        24 h~~iv~l~~~~~~-~~~~~lv~e~~~~g~l~~~--l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~   96 (160)
                      +.+.+.+..++.+ ....+++|||+.|+.+.+.  +...+    .+.+..+..+..++..                    
T Consensus       219 ~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qif~--------------------  278 (537)
T PRK04750        219 DSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQVFR--------------------  278 (537)
T ss_pred             CCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHHHh--------------------
Confidence            4444544444432 4567899999999988653  22222    1223333333333221                    


Q ss_pred             eeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         97 CKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        97 ~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                          .+++|+|++|.|++++.++      +....+++.|||+...++
T Consensus       279 --------------------~GffHaDpHPGNIlv~~~g------~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        279 --------------------DGFFHADMHPGNIFVSYDP------PENPRYIALDFGIVGSLN  315 (537)
T ss_pred             --------------------CCeeeCCCChHHeEEecCC------CCCCeEEEEecceEEECC
Confidence                                1689999999999998543      123478999999987654

>KOG0615|consensus

Probab=98.11  E-value=9.3e-06  Score=63.78  Aligned_cols=78  Identities=26%  Similarity=0.336  Sum_probs=54.4

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCC----HHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLS----EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNG  113 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~  113 (160)
                      +.+-+++|.-++..++.++..+....    +..........++.++     +++|||||++.++++.....|+||||+.|
T Consensus       186 g~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILk-----kL~HP~IV~~~d~f~~~ds~YmVlE~v~G  260 (475)
T KOG0615|consen  186 GLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILK-----KLSHPNIVRIKDFFEVPDSSYMVLEYVEG  260 (475)
T ss_pred             eEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHH-----hcCCCCEEEEeeeeecCCceEEEEEEecC
Confidence            34566677777777777766543221    1222222334444443     58999999999999999999999999999


Q ss_pred             CCcccce
Q psy11428        114 GDLARIV  120 (160)
Q Consensus       114 ~~l~~ii  120 (160)
                      |+|.+.+
T Consensus       261 GeLfd~v  267 (475)
T KOG0615|consen  261 GELFDKV  267 (475)
T ss_pred             ccHHHHH
Confidence            9997654

>KOG0575|consensus

Probab=97.96  E-value=2.9e-05  Score=63.39  Aligned_cols=76  Identities=26%  Similarity=0.458  Sum_probs=54.3

Q ss_pred             cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCccc
Q psy11428         39 HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR  118 (160)
Q Consensus        39 ~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~  118 (160)
                      .+|.+.+.-.|..++.+++.+..+.....+.-+.+.++.   .  +++.|||||++++.||+.+.+|+++|+|+.+.|..
T Consensus        33 ~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeI---H--r~L~HpnIV~f~~~FEDs~nVYivLELC~~~sL~e  107 (592)
T KOG0575|consen   33 RCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEI---H--RSLKHPNIVQFYHFFEDSNNVYIVLELCHRGSLME  107 (592)
T ss_pred             EEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHH---H--HhcCCCcEEeeeeEeecCCceEEEEEecCCccHHH
Confidence            456666667777788887776554333333222222222   1  35899999999999999999999999999999865


Q ss_pred             c
Q psy11428        119 I  119 (160)
Q Consensus       119 i  119 (160)
                      +
T Consensus       108 l  108 (592)
T KOG0575|consen  108 L  108 (592)
T ss_pred             H
Confidence            4

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.95  E-value=2.8e-05  Score=55.67  Aligned_cols=100  Identities=28%  Similarity=0.359  Sum_probs=55.6

Q ss_pred             HHHHHHHHHHHHhhcCCc--ceEEEeeeeecCCcEEEEEEEeC--CCceeEEEeeecCCCHHHHHHHHHHHHHHHHH-hh
Q psy11428          8 SIVLTRHILKELTELHHE--NVVELLHCKESDQHVYLVMEFCN--GGDLADYLVSKGTLSEDTIRIFLKQIVQALKA-FQ   82 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~--~iv~l~~~~~~~~~~~lv~e~~~--~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~   82 (160)
                      .-..+++|.+.|+.+...  ++.+.+...    .-.++|||++  |..+.. +... .+..........+++..+.. ++
T Consensus        51 ~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~----~~~ivME~I~~~G~~~~~-l~~~-~~~~~~~~~~~~~il~~~~~~~~  124 (188)
T PF01163_consen   51 IREWAKKEFRNLKRLYEAGVPVPKPYDYN----RNVIVMEYIGEDGVPLPR-LKDV-DLSPEEPKELLEEILEEIIKMLH  124 (188)
T ss_dssp             HHHHHHHHHHHHHHCCCTT-SS--EEEEE----TTEEEEE--EETTEEGGC-HHHC-GGGGSTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCccCCcEEEEe----CCEEEEEecCCCccchhh-HHhc-cccchhHHHHHHHHHHHHHHHHH
Confidence            345788899999999776  455555432    3479999998  433332 2111 11112233334444442222 21


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      .                                 .+++|+|+.+.|++++.+           .+.++|||.+..
T Consensus       125 ~---------------------------------~givHGDLs~~NIlv~~~-----------~~~iIDf~qav~  155 (188)
T PF01163_consen  125 K---------------------------------AGIVHGDLSEYNILVDDG-----------KVYIIDFGQAVD  155 (188)
T ss_dssp             C---------------------------------TTEEESS-STTSEEEETT-----------CEEE--GTTEEE
T ss_pred             h---------------------------------cCceecCCChhhEEeecc-----------eEEEEecCccee
Confidence            1                                 278999999999999742           588999998754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=97.89  E-value=4.6e-05  Score=57.59  Aligned_cols=110  Identities=20%  Similarity=0.275  Sum_probs=66.6

Q ss_pred             HHHHHHHHHhhcCCcceEE--Eeeeee--c---CCcEEEEEEEeCCC-ceeEEEee--ecCCCHHHHHHHHHHHHHHHHH
Q psy11428         11 LTRHILKELTELHHENVVE--LLHCKE--S---DQHVYLVMEFCNGG-DLADYLVS--KGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~--l~~~~~--~---~~~~~lv~e~~~~g-~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      .+.+|.+.+..|...+|..  ..+...  .   ....++++|++++. ++.+++..  ...........+..++...+..
T Consensus        74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~  153 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRD  153 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence            4667777776664333332  222221  1   23578999999886 56555421  1233344455566677777766


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      +|..                                 +++|+|++++|++++...   ...++...+.++||+.++
T Consensus       154 LH~~---------------------------------Gi~HgDL~~~NiLl~~~~---~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        154 MHAA---------------------------------GINHRDCYICHFLLHLPF---PGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHC---------------------------------cCccCCCChhhEEEeccc---cCCCCCceEEEEECCccc
Confidence            6642                                 789999999999997410   000123478999999774

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=97.85  E-value=0.00012  Score=53.04  Aligned_cols=79  Identities=28%  Similarity=0.426  Sum_probs=54.5

Q ss_pred             cEEEEEEEeCCC-ceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         39 HVYLVMEFCNGG-DLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        39 ~~~lv~e~~~~g-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      ..++++|.+++. ++.+.+......+......+..++...+..+|..                                 
T Consensus        91 ~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH~~---------------------------------  137 (206)
T PF06293_consen   91 RSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLHDA---------------------------------  137 (206)
T ss_pred             eEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHHHC---------------------------------
Confidence            458899999874 5665544322234445556666777777666542                                 


Q ss_pred             cceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428        118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus       118 ~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +++|+|+++.||++....       ....+.++||+-++.
T Consensus       138 gi~H~Dl~~~NILv~~~~-------~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  138 GIYHGDLNPSNILVDPDD-------GQYRFYLIDLDRMRF  170 (206)
T ss_pred             cCCCCCCCcccEEEeCCC-------CceeEEEEcchhcee
Confidence            789999999999998543       234688999987764

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1243|consensus

Probab=97.82  E-value=2.7e-05  Score=64.56  Aligned_cols=101  Identities=23%  Similarity=0.356  Sum_probs=73.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..++.+-+..|+.++||+|+++++++...+..|+|+|.+.--+  .++..   ..+..+...+.++..++..++..    
T Consensus        53 ~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~Pl~--~~lk~---l~~~~v~~Gl~qIl~AL~FL~~d----  123 (690)
T KOG1243|consen   53 TELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVRPLE--TVLKE---LGKEEVCLGLFQILAALSFLNDD----  123 (690)
T ss_pred             hHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccccHH--HHHHH---hHHHHHHHHHHHHHHHHHHHhcc----
Confidence            3445666777888999999999999999999999999875322  22222   22455666777888888876421    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                  ..++|+++.-..|+++..+          ..||++|...+
T Consensus       124 ----------------------------~~lvHgNv~~~SVfVn~~G----------eWkLggle~v~  153 (690)
T KOG1243|consen  124 ----------------------------CNLVHGNVCKDSVFVNESG----------EWKLGGLELVS  153 (690)
T ss_pred             ----------------------------CCeeeccEeeeeEEEcCCC----------cEEEeeeEEEe
Confidence                                        2468999999999998654          78899887653

>KOG0591|consensus

Probab=97.76  E-value=4.6e-06  Score=62.79  Aligned_cols=91  Identities=23%  Similarity=0.350  Sum_probs=59.6

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCcee
Q psy11428         13 RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVV   92 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv   92 (160)
                      ..+..+++.+.+.       +   -+.+|.|.....+..++.+-..-+.+.....+.++.+    +..  +.+|+|||||
T Consensus        18 l~~y~Il~~IG~G-------s---Fg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~E----i~l--LkQL~HpNIV   81 (375)
T KOG0591|consen   18 LADYQILKKIGRG-------S---FGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKE----ISL--LKQLNHPNIV   81 (375)
T ss_pred             HHHHHHHHHHcCC-------c---chheEEeeeccCcchhhhhhcchhhccHHHHHHHHHH----HHH--HHhcCCchHH
Confidence            3456666776652       2   3668888887777666654333344444444444433    222  2469999999


Q ss_pred             EEee-eeecCCe-eEEEEEecCCCCcccc
Q psy11428         93 ELLH-CKESDQH-VYLVMEFCNGGDLARI  119 (160)
Q Consensus        93 ~~~~-~~~~~~~-~~~~~ey~~~~~l~~i  119 (160)
                      ++++ .+-.+.. ++++||||.+|+|..+
T Consensus        82 qYy~~~f~~~~evlnivmE~c~~GDLsqm  110 (375)
T KOG0591|consen   82 QYYAHSFIEDNEVLNIVMELCDAGDLSQM  110 (375)
T ss_pred             HHHHHhhhccchhhHHHHHhhcccCHHHH
Confidence            9998 5655555 9999999999999543

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=97.70  E-value=0.00016  Score=52.09  Aligned_cols=74  Identities=23%  Similarity=0.244  Sum_probs=49.4

Q ss_pred             HHHHHHHHHHHhhcCCc--ceEEEeeeeecC---CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          9 IVLTRHILKELTELHHE--NVVELLHCKESD---QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~--~iv~l~~~~~~~---~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      .....+|.++++.+.+.  ++.+++......   +..++++++++|.++...+.. ..++......+..++.+.+..+|.
T Consensus        39 ~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~G~~l~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~  117 (223)
T cd05154          39 AHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVDGRVLRDRLLR-PELSPEERRALARALADTLAALHS  117 (223)
T ss_pred             cccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeCCEecCCCCCC-CCCCHHHHHHHHHHHHHHHHHHhC
Confidence            44567788888888653  345566555443   366899999999887765421 345555566667777788877764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG0586|consensus

Probab=97.69  E-value=0.00018  Score=58.97  Aligned_cols=80  Identities=28%  Similarity=0.471  Sum_probs=61.2

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      ..+.++..-.++++++.++..+........+.... .++.+     ..+.|||||+++.+.++...+|+||||+.+|.+.
T Consensus        70 ~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~r-ev~im-----k~l~HPnIvkl~~v~~t~~~lylV~eya~~ge~~  143 (596)
T KOG0586|consen   70 AKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGR-EVDIM-----KSLNHPNIVKLFSVIETEATLYLVMEYASGGELF  143 (596)
T ss_pred             EEEEeeEecCCCceEEEEEehhcccChHHHHHHHH-HHHHH-----HhcCCcceeeeeeeeeecceeEEEEEeccCchhH
Confidence            45788888889999999888776655544444322 22332     2489999999999999999999999999999987


Q ss_pred             cceecC
Q psy11428        118 RIVHRD  123 (160)
Q Consensus       118 ~iih~d  123 (160)
                      +.+..+
T Consensus       144 ~yl~~~  149 (596)
T KOG0586|consen  144 DYLVKH  149 (596)
T ss_pred             HHHHhc
Confidence            766544

>KOG0581|consensus

Probab=97.57  E-value=0.00061  Score=52.89  Aligned_cols=76  Identities=22%  Similarity=0.280  Sum_probs=53.7

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC-eeEEEEEecCCCC
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ-HVYLVMEFCNGGD  115 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~-~~~~~~ey~~~~~  115 (160)
                      .+.++++.+..++.-++.+.. +....+..    .+|++.++..++  ...+|+||+++..|.... .+.++|||+.+|+
T Consensus        92 gG~V~kv~Hk~t~~i~AlK~I-~~~~~~~~----~~Qi~rEl~il~--~~~spyIV~~ygaF~~~~~~isI~mEYMDgGS  164 (364)
T KOG0581|consen   92 GGTVYKVRHKPTGKIYALKVI-LLNIDPAL----QKQILRELEILR--SCQSPYIVGFYGAFYSNGEEISICMEYMDGGS  164 (364)
T ss_pred             CcEEEEEEEcCCCeEEEEEee-cccCCHHH----HHHHHHHHHHHh--hCCCCCeeeEeEEEEeCCceEEeehhhcCCCC
Confidence            567888887666655555544 22222222    345555555554  358999999999999999 5999999999999


Q ss_pred             cccc
Q psy11428        116 LARI  119 (160)
Q Consensus       116 l~~i  119 (160)
                      |..+
T Consensus       165 Ld~~  168 (364)
T KOG0581|consen  165 LDDI  168 (364)
T ss_pred             HHHH
Confidence            9654

>KOG0032|consensus

Probab=97.54  E-value=0.00049  Score=54.56  Aligned_cols=77  Identities=35%  Similarity=0.506  Sum_probs=54.2

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC-CCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH-HENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.++.+.+..+|..++.+...+...........+...+..++     ++. |||+|.+.+.+++...++++||+|.||.|
T Consensus        49 g~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~-----~l~~hpniv~l~~~~e~~~~~~lvmEL~~GGeL  123 (382)
T KOG0032|consen   49 GVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQ-----QLSGHPNIVQLKDAFEDPDSVYLVMELCEGGEL  123 (382)
T ss_pred             eEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHH-----hccCCCCEEEEEEEEEcCCeEEEEEEecCCchH
Confidence            457888888878888888776554432221112222223332     354 99999999999999999999999999998


Q ss_pred             ccc
Q psy11428        117 ARI  119 (160)
Q Consensus       117 ~~i  119 (160)
                      .+.
T Consensus       124 fd~  126 (382)
T KOG0032|consen  124 FDR  126 (382)
T ss_pred             HHH
Confidence            654

>KOG0605|consensus

Probab=97.45  E-value=0.00042  Score=56.17  Aligned_cols=77  Identities=21%  Similarity=0.348  Sum_probs=50.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCC-CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.++++.+.-+|.-++-++..+..+ ....+    ..+..+...+.  ....|.+|+++.+|++...+|++|||+.||++
T Consensus       155 GeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv----~hV~aERdiL~--~~ds~~vVKLyYsFQD~~~LYLiMEylPGGD~  228 (550)
T KOG0605|consen  155 GEVRLARKKDTGEIYAMKILKKSEMLKKNQV----EHVRAERDILA--EVDSPWVVKLYYSFQDKEYLYLIMEYLPGGDM  228 (550)
T ss_pred             eeEEEEEEccCCcEEeeecccHHHHHhhhhH----HHHHHHHHHhh--hcCCCcEEEEEEEecCCCeeEEEEEecCCccH
Confidence            6799999987765555544433322 11111    11111111111  24689999999999999999999999999999


Q ss_pred             ccce
Q psy11428        117 ARIV  120 (160)
Q Consensus       117 ~~ii  120 (160)
                      +.++
T Consensus       229 mTLL  232 (550)
T KOG0605|consen  229 MTLL  232 (550)
T ss_pred             HHHH
Confidence            7643

>KOG0610|consensus

Probab=97.40  E-value=0.00042  Score=54.73  Aligned_cols=39  Identities=36%  Similarity=0.590  Sum_probs=34.6

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      .+-||-+..++..+++.+...++||||.||+|-...++.
T Consensus       133 ~lDHPFlPTLYa~fet~~~~cl~meyCpGGdL~~LrqkQ  171 (459)
T KOG0610|consen  133 LLDHPFLPTLYASFETDKYSCLVMEYCPGGDLHSLRQKQ  171 (459)
T ss_pred             hcCCCccchhhheeeccceeEEEEecCCCccHHHHHhhC
Confidence            478999999999999999999999999999996655543

>KOG0590|consensus

Probab=97.38  E-value=3e-05  Score=64.74  Aligned_cols=108  Identities=28%  Similarity=0.395  Sum_probs=79.5

Q ss_pred             HHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEE-eeec-CCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428         10 VLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKG-TLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus        10 ~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ...+.|..+=+.+. |+|++..++........++..++..|+++...+ .... ..+......+..++..++.+.|.   
T Consensus        65 ~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~---  141 (601)
T KOG0590|consen   65 EHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP---  141 (601)
T ss_pred             hhcCccccccccccccccccccCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc---
Confidence            33444444444555 999999999999999999999999999998887 4433 45566666677777776665442   


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                       +                            .++.|+|++|+|.+++.++       .  .+++.|||+|...
T Consensus       142 -~----------------------------~~~~h~~ikP~n~~l~~s~-------~--~l~~~df~~At~~  175 (601)
T KOG0590|consen  142 -E----------------------------NGVTHRDIKPSNSLLDESG-------S--ALKIADFGLATAY  175 (601)
T ss_pred             -c----------------------------cccccCCCCCccchhccCC-------C--cccCCCchhhccc
Confidence             0                            1578999999999998542       1  6789999998643

>KOG0583|consensus

Probab=97.35  E-value=0.00061  Score=53.85  Aligned_cols=80  Identities=25%  Similarity=0.519  Sum_probs=52.2

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCC-HH-HHHHHHHHHHHHHHHhhhhhcC-CCceeEEeeeeecCCeeEEEEEecCCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLS-ED-TIRIFLKQIVQALKAFQVKELH-HENVVELLHCKESDQHVYLVMEFCNGG  114 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~l~-h~niv~~~~~~~~~~~~~~~~ey~~~~  114 (160)
                      +.+++......+...+.++..+.... .. ........   ++..+  ..+. ||||+++++++.....++++||||.||
T Consensus        31 gkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~r---Ei~~~--~~~~~HpnI~~l~ev~~t~~~~~ivmEy~~gG  105 (370)
T KOG0583|consen   31 GKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKR---EISIL--RRLRSHPNIIRLLEVFATPTKIYIVMEYCSGG  105 (370)
T ss_pred             eeEEEeeeccCCCeEEEEEechhcccccccccchhhHH---HHHHH--HHhccCCCEeEEEEEEecCCeEEEEEEecCCc
Confidence            55677777777767777665543221 11 11111111   22111  2455 999999999999999999999999999


Q ss_pred             Ccccceec
Q psy11428        115 DLARIVHR  122 (160)
Q Consensus       115 ~l~~iih~  122 (160)
                      +|...+..
T Consensus       106 dL~~~i~~  113 (370)
T KOG0583|consen  106 DLFDYIVN  113 (370)
T ss_pred             cHHHHHHH
Confidence            99776544

>KOG0592|consensus

Probab=97.34  E-value=0.00022  Score=58.03  Aligned_cols=37  Identities=24%  Similarity=0.590  Sum_probs=34.2

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      +||.|++++..|++...+|+++||+.+|+|.+.|++-
T Consensus       132 ~hPgivkLy~TFQD~~sLYFvLe~A~nGdll~~i~K~  168 (604)
T KOG0592|consen  132 GHPGIVKLYFTFQDEESLYFVLEYAPNGDLLDLIKKY  168 (604)
T ss_pred             CCCCeEEEEEEeecccceEEEEEecCCCcHHHHHHHh
Confidence            8999999999999999999999999999998776653

>KOG1240|consensus

Probab=97.28  E-value=3.1e-05  Score=67.49  Aligned_cols=99  Identities=23%  Similarity=0.316  Sum_probs=72.4

Q ss_pred             HHHHHHH--HhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         12 TRHILKE--LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        12 ~~~~~~~--l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      +.+.|+.  ....++||.+.+.-....+...|+|..|.. -+|.+.+.-+--+...+.+-+..|++.++..+|..     
T Consensus        66 ~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqyvk-hnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~-----  139 (1431)
T KOG1240|consen   66 FKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQYVK-HNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKL-----  139 (1431)
T ss_pred             HHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHHHh-hhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHc-----
Confidence            3344444  345589999998877777778888887774 46777664443345666666788999999887752     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeec
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGF  154 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~  154 (160)
                                                  ++.|+|||.+|||+++=          .++.|+||.-
T Consensus       140 ----------------------------gVcHGDIKsENILiTSW----------NW~~LtDFAs  166 (1431)
T KOG1240|consen  140 ----------------------------GVCHGDIKSENILITSW----------NWLYLTDFAS  166 (1431)
T ss_pred             ----------------------------CccccccccceEEEeee----------chhhhhcccc
Confidence                                        78999999999999952          2678999954

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=97.27  E-value=0.0015  Score=49.33  Aligned_cols=96  Identities=23%  Similarity=0.272  Sum_probs=60.7

Q ss_pred             HHHHHHHHHHHHhhcCCc--ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHE--NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~--~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      +...++.|.++|..|...  .+.+.++    .+...++||++.|..|...-.     .......+...+++.++.+-.  
T Consensus       152 sRl~A~rEf~~L~~L~~~G~~VP~P~~----~nRHaVvMe~ieG~eL~~~r~-----~~en~~~il~~il~~~~~~~~--  220 (304)
T COG0478         152 SRLAAEREFEALQRLYPEGVKVPKPIA----WNRHAVVMEYIEGVELYRLRL-----DVENPDEILDKILEEVRKAYR--  220 (304)
T ss_pred             HHHHHHHHHHHHHHhhhcCCCCCCccc----cccceeeeehcccceeecccC-----cccCHHHHHHHHHHHHHHHHH--
Confidence            456788999999998654  4444333    466789999999977764321     111122222333333332211  


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA  155 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a  155 (160)
                                                     .+++|+|+++=||+++.++          .+.++||=.+
T Consensus       221 -------------------------------~GiVHGDlSefNIlV~~dg----------~~~vIDwPQ~  249 (304)
T COG0478         221 -------------------------------RGIVHGDLSEFNILVTEDG----------DIVVIDWPQA  249 (304)
T ss_pred             -------------------------------cCccccCCchheEEEecCC----------CEEEEeCccc
Confidence                                           2789999999999998653          5789998544

>KOG0589|consensus

Probab=97.22  E-value=0.00071  Score=54.05  Aligned_cols=37  Identities=43%  Similarity=0.821  Sum_probs=33.1

Q ss_pred             hhcCCCceeEEeeeeecCCe-eEEEEEecCCCCcccce
Q psy11428         84 KELHHENVVELLHCKESDQH-VYLVMEFCNGGDLARIV  120 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~-~~~~~ey~~~~~l~~ii  120 (160)
                      .++.|||||.+.+.+..++. ++++|+||.||++...+
T Consensus        58 s~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~eGg~l~~~i   95 (426)
T KOG0589|consen   58 SKLLHPNIVEYKDSFEEDGQLLCIVMEYCEGGDLAQLI   95 (426)
T ss_pred             HhccCCCeeeeccchhcCCceEEEEEeecCCCCHHHHH
Confidence            35899999999999998888 99999999999997654

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=97.22  E-value=0.0017  Score=51.10  Aligned_cols=80  Identities=20%  Similarity=0.269  Sum_probs=51.7

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+.-.+..++.+.............   ..+..+...  ...+.|||+++++..+.+...++++||||.|++|.
T Consensus        15 g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~---~~~~~E~~i--l~~l~h~~iv~l~~~~~~~~~~~lv~E~~~gg~L~   89 (381)
T cd05626          15 GEVCLACKVDTHALYAMKTLRKKDVLNRNQV---AHVKAERDI--LAEADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMM   89 (381)
T ss_pred             EEEEEEEECCCCCEEEEEEEEHHHhhhhHHH---HHHHHHHHH--HHhcCCCCeeeeEEEEecCCEEEEEEecCCCCcHH
Confidence            5678887766665666555433222111111   111112221  13478999999999999999999999999999987


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++.+
T Consensus        90 ~~l~~   94 (381)
T cd05626          90 SLLIR   94 (381)
T ss_pred             HHHHh
Confidence            66544

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0694|consensus

Probab=97.22  E-value=0.0028  Score=52.93  Aligned_cols=94  Identities=26%  Similarity=0.490  Sum_probs=56.4

Q ss_pred             CCcceEEEeeeeecCCcEEEEEEEeCCCc-eeEEEeeecC-CCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec
Q psy11428         23 HHENVVELLHCKESDQHVYLVMEFCNGGD-LADYLVSKGT-LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES  100 (160)
Q Consensus        23 ~h~~iv~l~~~~~~~~~~~lv~e~~~~g~-l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~  100 (160)
                      ++-++++++|--. -+.++++ ++.+.+. .+.++.+++. +...++.....+    -+-+...+ .||-++.++..|++
T Consensus       368 ~~F~~l~vLGkGs-FGkV~la-e~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~E----krI~~la~-~HPFL~~L~~~fQT  440 (694)
T KOG0694|consen  368 DDFRLLAVLGRGS-FGKVLLA-ELKGTNEYYAIKVLKKGDILQRDEVESLMCE----KRIFELAN-RHPFLVNLFSCFQT  440 (694)
T ss_pred             cceEEEEEeccCc-CceEEEE-EEcCCCcEEEEEEeeccceeccccHHHHHHH----HHHHHHhc-cCCeEeeccccccc
Confidence            3444455544221 1344444 4444444 4445444443 344444332221    22222222 79999999999999


Q ss_pred             CCeeEEEEEecCCCCcccceecC
Q psy11428        101 DQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus       101 ~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      .+.++++|||++||++..+.|.+
T Consensus       441 ~~~l~fvmey~~Ggdm~~~~~~~  463 (694)
T KOG0694|consen  441 KEHLFFVMEYVAGGDLMHHIHTD  463 (694)
T ss_pred             CCeEEEEEEecCCCcEEEEEecc
Confidence            99999999999999988877755

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=97.17  E-value=0.0012  Score=51.36  Aligned_cols=80  Identities=24%  Similarity=0.295  Sum_probs=51.7

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+......................+     ..++|||+++++..+.....++++||||.|++|.
T Consensus        15 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il-----~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~   89 (364)
T cd05599          15 GEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDIL-----AEADNPWVVKLYYSFQDENYLYLIMEYLPGGDMM   89 (364)
T ss_pred             EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH-----HhCCCCCCcceEEEEEcCCeEEEEECCCCCcHHH
Confidence            46788777666666665554332221111111111222222     3467999999999999999999999999999997


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      ..+++
T Consensus        90 ~~l~~   94 (364)
T cd05599          90 TLLMK   94 (364)
T ss_pred             HHHHH
Confidence            76654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=97.13  E-value=0.0019  Score=50.68  Aligned_cols=79  Identities=27%  Similarity=0.284  Sum_probs=49.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+...+........   ...+..+...  ...+.|||++++++.+.....++++|||+.|++|.
T Consensus        15 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~---~~~~~~E~~i--l~~l~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~   89 (377)
T cd05629          15 GEVRLVQKKDTGKIYAMKTLLKSEMFKKDQ---LAHVKAERDV--LAESDSPWVVSLYYSFQDAQYLYLIMEFLPGGDLM   89 (377)
T ss_pred             EEEEEEEECCCCCEEEEEEEEHHHHHHhHH---HHHHHHHHHH--HHhCCCCCcceEEEEEEcCCeeEEEEeCCCCCcHH
Confidence            567777776666555554332211111111   1111111221  13478999999999999999999999999999987


Q ss_pred             ccee
Q psy11428        118 RIVH  121 (160)
Q Consensus       118 ~iih  121 (160)
                      ..+.
T Consensus        90 ~~l~   93 (377)
T cd05629          90 TMLI   93 (377)
T ss_pred             HHHH
Confidence            6554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=97.13  E-value=0.0035  Score=48.15  Aligned_cols=81  Identities=27%  Similarity=0.446  Sum_probs=51.0

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCC-CHHHHHHHHHHHHHHHHHhh-hhhcCCCceeEEeeeeecCCeeEEEEEecCCCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQALKAFQ-VKELHHENVVELLHCKESDQHVYLVMEFCNGGD  115 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~  115 (160)
                      +.+|++.+...+..++.+...+... .......    +....+.+. ...+.|||+++++..+...+..+++|||+.|++
T Consensus        13 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~----l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~   88 (324)
T cd05589          13 GKVLLAEYKKTGELYAIKALKKGDIIARDEVES----LMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEYAAGGD   88 (324)
T ss_pred             EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHH----HHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcCCCCCc
Confidence            5677777655565566555433211 1111111    111222111 235789999999999999999999999999999


Q ss_pred             cccceec
Q psy11428        116 LARIVHR  122 (160)
Q Consensus       116 l~~iih~  122 (160)
                      +...+++
T Consensus        89 L~~~~~~   95 (324)
T cd05589          89 LMMHIHT   95 (324)
T ss_pred             HHHHhhc
Confidence            8665544

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=97.10  E-value=0.0022  Score=50.47  Aligned_cols=80  Identities=20%  Similarity=0.261  Sum_probs=50.4

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+...+.......   ....+..+...  ...+.|||+++++..+.....++++||||.+|+|.
T Consensus        15 g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~---~~~~~~~E~~i--l~~~~h~~iv~~~~~~~~~~~~~lv~E~~~gg~L~   89 (382)
T cd05625          15 GEVCLARKVDTKALYAMKTLRKKDVLLRN---QVAHVKAERDI--LAEADNEWVVRLYYSFQDKDNLYFVMDYIPGGDMM   89 (382)
T ss_pred             EEEEEEEECCCCCEEEEEEEeHHHhhhHH---HHHHHHHHHHH--HHhCCCCcCCeEEEEEEeCCEEEEEEeCCCCCcHH
Confidence            56788777655555555443322111111   11111112111  13578999999999999999999999999999987


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      ..+.+
T Consensus        90 ~~l~~   94 (382)
T cd05625          90 SLLIR   94 (382)
T ss_pred             HHHHh
Confidence            76654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0194|consensus

Probab=97.09  E-value=0.00082  Score=54.49  Aligned_cols=39  Identities=36%  Similarity=0.695  Sum_probs=35.1

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .++.|||+|+++..+-....+|++||+|.||+|.+.+-.
T Consensus       216 r~l~H~NVVr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k  254 (474)
T KOG0194|consen  216 RQLNHPNVVRFYGVAVLEEPLMLVMELCNGGSLDDYLKK  254 (474)
T ss_pred             HhCCCCCEEEEEEEEcCCCccEEEEEecCCCcHHHHHHh
Confidence            458999999999999999999999999999999776544

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=97.07  E-value=0.0022  Score=50.08  Aligned_cols=80  Identities=23%  Similarity=0.286  Sum_probs=51.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.++..+..................     ...+.|||+++++..+.+...++++||||.|++|.
T Consensus        15 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~i-----l~~~~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~   89 (363)
T cd05628          15 GEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDI-----LVEADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMM   89 (363)
T ss_pred             EEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHH-----HHhCCCCCcceEEEEEecCCeEEEEEcCCCCCcHH
Confidence            5678887766666666555433211111111111111111     13478999999999999999999999999999987


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      ..+.+
T Consensus        90 ~~l~~   94 (363)
T cd05628          90 TLLMK   94 (363)
T ss_pred             HHHHh
Confidence            76644

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=97.06  E-value=0.0026  Score=50.06  Aligned_cols=79  Identities=25%  Similarity=0.291  Sum_probs=50.8

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.++..+.............+....+     ..+.|||+++++..++....++++|||+.|++|.
T Consensus        57 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~-----~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~  131 (370)
T cd05621          57 GEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIM-----AFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV  131 (370)
T ss_pred             eEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHH-----HhCCCCCEeeEEEEEEcCCEEEEEEcCCCCCcHH
Confidence            56788777666666665554332111111111111111211     3478999999999999999999999999999997


Q ss_pred             ccee
Q psy11428        118 RIVH  121 (160)
Q Consensus       118 ~iih  121 (160)
                      .++.
T Consensus       132 ~~l~  135 (370)
T cd05621         132 NLMS  135 (370)
T ss_pred             HHHH
Confidence            6654

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0197|consensus

Probab=97.03  E-value=0.0077  Score=48.69  Aligned_cols=94  Identities=24%  Similarity=0.375  Sum_probs=61.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .....+.++..+++|.+.+.-.          +++.. |.+..+.+.+..+.+.++.....    +.++.++     +|.
T Consensus       200 ~wei~r~~l~l~~~LG~G~FG~----------V~~g~-~~~~~~vavk~ik~~~m~~~~f~----~Ea~iMk-----~L~  259 (468)
T KOG0197|consen  200 PWEIPREELKLIRELGSGQFGE----------VWLGK-WNGSTKVAVKTIKEGSMSPEAFL----REAQIMK-----KLR  259 (468)
T ss_pred             CeeecHHHHHHHHHhcCCccce----------EEEEE-EcCCCcccceEEeccccChhHHH----HHHHHHH-----hCc
Confidence            3445567778888887765322          33322 33343555554444555433332    2333333     588


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      |+++|+++.++...+.+++||||+..|+|..++-
T Consensus       260 H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~yLr  293 (468)
T KOG0197|consen  260 HEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDYLR  293 (468)
T ss_pred             ccCeEEEEEEEecCCceEEEEEecccCcHHHHhh
Confidence            9999999999999999999999999999977654

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=97.03  E-value=0.0023  Score=50.14  Aligned_cols=38  Identities=32%  Similarity=0.592  Sum_probs=34.3

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||+++++..+...+.++++||||.|++|..++.+
T Consensus        57 ~l~h~~iv~~~~~~~~~~~~~lv~E~~~~g~L~~~i~~   94 (376)
T cd05598          57 EADNEWVVKLYYSFQDKDNLYFVMDYIPGGDMMSLLIR   94 (376)
T ss_pred             hCCCCCcceEEEEEEcCCEEEEEEeCCCCCcHHHHHHh
Confidence            57899999999999999999999999999999776644

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=97.02  E-value=0.0025  Score=50.10  Aligned_cols=90  Identities=23%  Similarity=0.284  Sum_probs=54.8

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.++.- ..+.+|++.+...+..++.+...+..................+     ..++|||++++...++..+.+++
T Consensus        47 ~~~~lg~G-~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il-----~~~~h~~iv~~~~~~~~~~~~~l  120 (370)
T cd05596          47 VIKVIGRG-AFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIM-----AHANSEWIVQLHYAFQDDKYLYM  120 (370)
T ss_pred             EEEEEeeC-CCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHH-----HhCCCCCcceEEEEEecCCEEEE
Confidence            44444422 2356788877666655655544322111111111111112222     34789999999999999999999


Q ss_pred             EEEecCCCCcccceec
Q psy11428        107 VMEFCNGGDLARIVHR  122 (160)
Q Consensus       107 ~~ey~~~~~l~~iih~  122 (160)
                      +|||+.|++|..++++
T Consensus       121 v~Ey~~gg~L~~~l~~  136 (370)
T cd05596         121 VMEYMPGGDLVNLMSN  136 (370)
T ss_pred             EEcCCCCCcHHHHHHh
Confidence            9999999999776654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG3741|consensus

Probab=96.98  E-value=0.005  Score=50.45  Aligned_cols=99  Identities=19%  Similarity=0.363  Sum_probs=70.5

Q ss_pred             HHHHHHhhcCCcceEEEeeeee----cCCcEEEEEEEeCCC-ceeEE-Ee--------------eecCCCHHHHHHHHHH
Q psy11428         14 HILKELTELHHENVVELLHCKE----SDQHVYLVMEFCNGG-DLADY-LV--------------SKGTLSEDTIRIFLKQ   73 (160)
Q Consensus        14 ~~~~~l~~l~h~~iv~l~~~~~----~~~~~~lv~e~~~~g-~l~~~-l~--------------~~~~~~~~~~~~~~~~   73 (160)
                      +.++..+++.|+|+|.+.+++.    ....+++|++|.++. +|.++ ..              .....++..+|.++.|
T Consensus       322 ~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~Q  401 (655)
T KOG3741|consen  322 SLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQ  401 (655)
T ss_pred             HHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHH
Confidence            3577889999999999988776    335689999998875 23332 11              1112467889999999


Q ss_pred             HHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeee
Q psy11428         74 IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG  153 (160)
Q Consensus        74 ~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg  153 (160)
                      +..++...|..                                 ++.-+-+.+.+|+++.+          -+++++..|
T Consensus       402 LtaaL~sIHss---------------------------------GLAck~L~~~kIlv~G~----------~RIriS~C~  438 (655)
T KOG3741|consen  402 LTAALYSIHSS---------------------------------GLACKTLDLKKILVTGK----------MRIRISGCG  438 (655)
T ss_pred             HHHHHHHHHhc---------------------------------CceeecccHhHeEeeCc----------ceEEEeccc
Confidence            99999987753                                 34457788899999732          256666666


Q ss_pred             cc
Q psy11428        154 FA  155 (160)
Q Consensus       154 ~a  155 (160)
                      +.
T Consensus       439 i~  440 (655)
T KOG3741|consen  439 IM  440 (655)
T ss_pred             ce
Confidence            54

>KOG0598|consensus

Probab=96.98  E-value=0.0037  Score=48.59  Aligned_cols=34  Identities=29%  Similarity=0.686  Sum_probs=31.8

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR  118 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~  118 (160)
                      ..+||.||++...|++.+.+|+++||+.||.|.-
T Consensus        81 ~v~hPFiv~l~ysFQt~~kLylVld~~~GGeLf~  114 (357)
T KOG0598|consen   81 KIKHPFIVKLIYSFQTEEKLYLVLDYLNGGELFY  114 (357)
T ss_pred             hCCCCcEeeeEEecccCCeEEEEEeccCCccHHH
Confidence            4899999999999999999999999999999854

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=96.97  E-value=0.003  Score=48.72  Aligned_cols=79  Identities=20%  Similarity=0.309  Sum_probs=50.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+...........   ....+..+...  ..++.|||+++++..+...+.++++|||+.+++|.
T Consensus        32 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~---~~~~~~~E~~~--l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~  106 (329)
T PTZ00263         32 GRVRIAKHKGTGEYYAIKCLKKREILKMK---QVQHVAQEKSI--LMELSHPFIVNMMCSFQDENRVYFLLEFVVGGELF  106 (329)
T ss_pred             eEEEEEEECCCCCEEEEEEEEHHHHhhhh---hHHHHHHHHHH--HHhCCCCCCCcEEEEEEcCCEEEEEEcCCCCChHH
Confidence            56788777665655655544322111111   11111122222  23578999999999999999999999999999986


Q ss_pred             ccee
Q psy11428        118 RIVH  121 (160)
Q Consensus       118 ~iih  121 (160)
                      ..+.
T Consensus       107 ~~l~  110 (329)
T PTZ00263        107 THLR  110 (329)
T ss_pred             HHHH
Confidence            6554

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=96.94  E-value=0.004  Score=47.57  Aligned_cols=39  Identities=31%  Similarity=0.537  Sum_probs=34.4

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ..+.|||+++++..+...+..+++|||+.+++|...+.+
T Consensus        48 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~   86 (312)
T cd05585          48 AQVNCPFIVPLKFSFQSPEKLYLVLAFINGGELFHHLQR   86 (312)
T ss_pred             HhCCCCcEeceeeEEecCCeEEEEEcCCCCCcHHHHHHh
Confidence            357899999999999999999999999999999766644

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=96.92  E-value=0.0038  Score=48.10  Aligned_cols=80  Identities=23%  Similarity=0.332  Sum_probs=50.4

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+...........   ....+..+...  ...+.|||+++++..++.....+++|||+.|++|.
T Consensus        15 g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~---~~~~~~~e~~~--l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g~~L~   89 (333)
T cd05600          15 GQVFLAKKKDTGEIVALKRMKKSLLFKLN---EVRHVLTERDI--LTTTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFR   89 (333)
T ss_pred             eEEEEEEECCCCCEEEEEEEEHHHHhhhh---HHHHHHHHHHH--HHhCCCCCCccEEEEEEcCCEEEEEEeCCCCCCHH
Confidence            56777776555555555543322111111   11111222222  13467999999999999999999999999999998


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++..
T Consensus        90 ~~l~~   94 (333)
T cd05600          90 TLLNN   94 (333)
T ss_pred             HHHHH
Confidence            77653

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG1235|consensus

Probab=96.92  E-value=0.0046  Score=50.99  Aligned_cols=36  Identities=22%  Similarity=0.354  Sum_probs=28.6

Q ss_pred             cceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428        118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus       118 ~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                      +.+|.|..|.|++++++.      +....+.+.|||+.+.+.
T Consensus       321 GffHaDPHPGNilv~~~~------~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  321 GFFHADPHPGNILVRPNP------EGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             CCccCCCCCCcEEEecCC------CCCccEEEEccccccccc
Confidence            579999999999998542      234578999999987654

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=96.90  E-value=0.004  Score=47.84  Aligned_cols=78  Identities=23%  Similarity=0.324  Sum_probs=49.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCC-CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|++.+.-.+..++.+....... .......+    ..+...  ...+.|||+++++..+...+..+++|||+.++++
T Consensus         9 g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~----~~E~~~--l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L   82 (323)
T cd05595           9 GKVILVREKATGRYYAMKILRKEVIIAKDEVAHT----VTESRV--LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGEL   82 (323)
T ss_pred             EEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHH----HHHHHH--HHhCCCCCCcceeeEEecCCEEEEEEeCCCCCcH
Confidence            5677777655555555554332211 11111111    111221  2357899999999999999999999999999998


Q ss_pred             cccee
Q psy11428        117 ARIVH  121 (160)
Q Consensus       117 ~~iih  121 (160)
                      ...+.
T Consensus        83 ~~~l~   87 (323)
T cd05595          83 FFHLS   87 (323)
T ss_pred             HHHHH
Confidence            65543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=96.89  E-value=0.014  Score=42.89  Aligned_cols=68  Identities=29%  Similarity=0.430  Sum_probs=44.8

Q ss_pred             cCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCC
Q psy11428         36 SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD  115 (160)
Q Consensus        36 ~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~  115 (160)
                      .....++++||++|..+.+...    +++.    ....+.+++..+|.                                
T Consensus       114 ~~~~~~ll~EYIeG~~l~d~~~----i~e~----~~~ki~~~ikqlH~--------------------------------  153 (229)
T PF06176_consen  114 YTSSYVLLMEYIEGVELNDIED----IDED----LAEKIVEAIKQLHK--------------------------------  153 (229)
T ss_pred             ceeEEEEEEEEecCeecccchh----cCHH----HHHHHHHHHHHHHH--------------------------------
Confidence            3355678999999988876531    2221    12233344444443                                


Q ss_pred             cccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecc
Q psy11428        116 LARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA  155 (160)
Q Consensus       116 l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a  155 (160)
                       .++.|+|+.|.|++++.+           .+++.||+-.
T Consensus       154 -~G~~HGD~hpgNFlv~~~-----------~i~iID~~~k  181 (229)
T PF06176_consen  154 -HGFYHGDPHPGNFLVSNN-----------GIRIIDTQGK  181 (229)
T ss_pred             -cCCccCCCCcCcEEEECC-----------cEEEEECccc
Confidence             268999999999999743           4789999754

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=96.88  E-value=0.0044  Score=47.57  Aligned_cols=78  Identities=22%  Similarity=0.302  Sum_probs=49.8

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCC-HHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|++.+...+..++.++....... .......    ..+.+.  ...+.|||++++...+.....++++|||+.++++
T Consensus         9 g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~----~~e~~~--l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~L   82 (325)
T cd05594           9 GKVILVKEKATGRYYAMKILKKEVIVAKDEVAHT----LTENRV--LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGEL   82 (325)
T ss_pred             EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHH----HHHHHH--HHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCcH
Confidence            56777777666666665554432211 1111111    111221  2357899999999999999999999999999988


Q ss_pred             cccee
Q psy11428        117 ARIVH  121 (160)
Q Consensus       117 ~~iih  121 (160)
                      ...+.
T Consensus        83 ~~~l~   87 (325)
T cd05594          83 FFHLS   87 (325)
T ss_pred             HHHHH
Confidence            65443

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=96.87  E-value=0.0052  Score=47.93  Aligned_cols=80  Identities=24%  Similarity=0.318  Sum_probs=50.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.....+..++.++............   ..+..+...  ..++.||++++++..+.....++++|||+.|++|.
T Consensus        15 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~---~~~~~e~~~--l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~gg~L~   89 (360)
T cd05627          15 GEVRLVQKKDTGHIYAMKILRKADMLEKEQV---AHIRAERDI--LVEADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMM   89 (360)
T ss_pred             EEEEEEEECCCCCEEEEEEEEHHHHhhhhhH---HHHHHHHHH--HHhCCCCCEeeEEEEEEcCCEEEEEEeCCCCccHH
Confidence            5677777665555555554432111111111   111111111  13578999999999999999999999999999997


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++.+
T Consensus        90 ~~l~~   94 (360)
T cd05627          90 TLLMK   94 (360)
T ss_pred             HHHHh
Confidence            76643

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=96.86  E-value=0.0051  Score=47.40  Aligned_cols=78  Identities=24%  Similarity=0.334  Sum_probs=50.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCC-CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|++.+.-.+..++.++...... .......+.    .+...  ...+.|||++++...+.....++++|||+.++++
T Consensus         9 g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~----~E~~~--l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~L   82 (328)
T cd05593           9 GKVILVREKASGKYYAMKILKKEVIIAKDEVAHTL----TESRV--LKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGEL   82 (328)
T ss_pred             EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHH----HHHHH--HHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCCH
Confidence            5677777766666666555433211 111111111    11111  2357899999999999999999999999999988


Q ss_pred             cccee
Q psy11428        117 ARIVH  121 (160)
Q Consensus       117 ~~iih  121 (160)
                      ...+.
T Consensus        83 ~~~l~   87 (328)
T cd05593          83 FFHLS   87 (328)
T ss_pred             HHHHH
Confidence            65543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=96.85  E-value=0.0048  Score=47.39  Aligned_cols=78  Identities=22%  Similarity=0.317  Sum_probs=49.8

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCC-CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|++.+...+..++.+....... ........    ..+...  ..++.|||++++...++..+.++++|||+.++++
T Consensus         9 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~----~~e~~~--l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~L   82 (323)
T cd05571           9 GKVILVREKATGKYYAMKILKKEVIIAKDEVAHT----LTESRV--LQNTRHPFLTALKYSFQTHDRLCFVMEYANGGEL   82 (323)
T ss_pred             eEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHH----HHHHHH--HHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCcH
Confidence            5677777666565566554432211 11111111    111111  1357899999999999999999999999999988


Q ss_pred             cccee
Q psy11428        117 ARIVH  121 (160)
Q Consensus       117 ~~iih  121 (160)
                      ...+.
T Consensus        83 ~~~l~   87 (323)
T cd05571          83 FFHLS   87 (323)
T ss_pred             HHHHH
Confidence            65554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=96.84  E-value=0.014  Score=42.23  Aligned_cols=108  Identities=27%  Similarity=0.419  Sum_probs=64.7

Q ss_pred             hHHHHHHHHHHHHhhcC------CcceEEEeeeeecCCcEEEEEEEeCCCc--ee----EEEeeecCCCHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELH------HENVVELLHCKESDQHVYLVMEFCNGGD--LA----DYLVSKGTLSEDTIRIFLKQI   74 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~------h~~iv~l~~~~~~~~~~~lv~e~~~~g~--l~----~~l~~~~~~~~~~~~~~~~~~   74 (160)
                      ++....+.|+.....+.      +.+|.+++|..+++--.-+|+|.+.+.+  ++    .++ ..+.+++ .....+.+.
T Consensus        53 ~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l-~~~~~~~-~~~~~L~~f  130 (199)
T PF10707_consen   53 SRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGFVETNLGLGLVVELIRDADGNISPTLEDYL-KEGGLTE-ELRQALDEF  130 (199)
T ss_pred             chhHHHHHHHHHHHHHhhccCCcccccccEeEEEecCCceEEEEEEEECCCCCcCccHHHHH-HcCCccH-HHHHHHHHH
Confidence            34555666666665555      8899999999999988889998876532  22    222 1222333 222222222


Q ss_pred             HHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEee-ee
Q psy11428         75 VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIAD-FG  153 (160)
Q Consensus        75 ~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~d-fg  153 (160)
                      .+.+..                                    -.++.+|++|.||++..+..      ....+.++| ||
T Consensus       131 ~~~l~~------------------------------------~~Iv~~dl~~~NIv~~~~~~------~~~~lvlIDG~G  168 (199)
T PF10707_consen  131 KRYLLD------------------------------------HHIVIRDLNPHNIVVQRRDS------GEFRLVLIDGLG  168 (199)
T ss_pred             HHHHHH------------------------------------cCCeecCCCcccEEEEecCC------CceEEEEEeCCC
Confidence            222211                                    15789999999999986542      222567777 56


Q ss_pred             ccccc
Q psy11428        154 FARFL  158 (160)
Q Consensus       154 ~a~~~  158 (160)
                      -..++
T Consensus       169 ~~~~i  173 (199)
T PF10707_consen  169 EKELI  173 (199)
T ss_pred             Ccccc
Confidence            55443

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=96.83  E-value=0.007  Score=45.33  Aligned_cols=38  Identities=34%  Similarity=0.489  Sum_probs=33.4

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .++.|||++++...++.....+++|||+.|+++...++
T Consensus        48 ~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L~~~~~   85 (277)
T cd05607          48 EKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDLKYHIY   85 (277)
T ss_pred             HhcCCCcEEEEEEEEecCCeEEEEEecCCCCCHHHHHH
Confidence            35789999999999999999999999999999865553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=96.83  E-value=0.0022  Score=48.45  Aligned_cols=79  Identities=18%  Similarity=0.275  Sum_probs=49.8

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+......................     ...+.|||+++++..+.+....+++|||+.+++|.
T Consensus        15 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~-----l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~   89 (291)
T cd05612          15 GRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRV-----LKEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELF   89 (291)
T ss_pred             eEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHH-----HHhCCCCcHhhhHhhhccCCeEEEEEeCCCCCCHH
Confidence            5678887766665555554332211111111111111122     23578999999999999999999999999999987


Q ss_pred             ccee
Q psy11428        118 RIVH  121 (160)
Q Consensus       118 ~iih  121 (160)
                      .++.
T Consensus        90 ~~~~   93 (291)
T cd05612          90 SYLR   93 (291)
T ss_pred             HHHH
Confidence            6654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=96.82  E-value=0.0046  Score=47.71  Aligned_cols=80  Identities=19%  Similarity=0.257  Sum_probs=50.1

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++...-.+..++.++..+.............+....+     ..++|||+++++..++..+.++++|||+.|++|.
T Consensus        15 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l-----~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~~L~   89 (331)
T cd05597          15 GEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVL-----VNGDRRWITNLHYAFQDENNLYLVMDYYVGGDLL   89 (331)
T ss_pred             eEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHH-----HhCCCCCCCceEEEEecCCeEEEEEecCCCCcHH
Confidence            46677766555655665544321111111111111111111     2478999999999999999999999999999997


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++.+
T Consensus        90 ~~l~~   94 (331)
T cd05597          90 TLLSK   94 (331)
T ss_pred             HHHHH
Confidence            76643

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=96.81  E-value=0.0063  Score=46.92  Aligned_cols=38  Identities=24%  Similarity=0.450  Sum_probs=34.4

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.||+++++...++..+..+++|||+.||+|..++++
T Consensus        57 ~~~~~~i~~l~~~~~~~~~~~lv~Ey~~gg~L~~~l~~   94 (331)
T cd05624          57 NGDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSK   94 (331)
T ss_pred             hCCCCCEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHH
Confidence            47899999999999999999999999999999877654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=96.80  E-value=0.0051  Score=48.39  Aligned_cols=79  Identities=25%  Similarity=0.285  Sum_probs=49.9

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.++..+.............+....+     ..+.|||+++++..+.....++++|||+.|++|.
T Consensus        57 g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~-----~~~~hp~iv~~~~~~~~~~~~~lv~Ey~~gg~L~  131 (371)
T cd05622          57 GEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-----AFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV  131 (371)
T ss_pred             eEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHH-----HhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHH
Confidence            56787777666655655544322111111111111111211     2478999999999999999999999999999987


Q ss_pred             ccee
Q psy11428        118 RIVH  121 (160)
Q Consensus       118 ~iih  121 (160)
                      .++.
T Consensus       132 ~~~~  135 (371)
T cd05622         132 NLMS  135 (371)
T ss_pred             HHHH
Confidence            6554

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=96.79  E-value=0.0063  Score=46.89  Aligned_cols=78  Identities=22%  Similarity=0.312  Sum_probs=47.8

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|++.+.-.+..++.++..+..................+     ..+ .|||+++++..+...+.++++|||+.|++|
T Consensus         9 g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il-----~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g~L   83 (329)
T cd05588           9 AKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVF-----ETASNHPFLVGLHSCFQTESRLFFVIEFVSGGDL   83 (329)
T ss_pred             eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH-----HhccCCCCCCceEEEEEcCCEEEEEEeCCCCCCH
Confidence            45677766555555655554432222111111111111111     123 699999999999999999999999999998


Q ss_pred             ccce
Q psy11428        117 ARIV  120 (160)
Q Consensus       117 ~~ii  120 (160)
                      ...+
T Consensus        84 ~~~~   87 (329)
T cd05588          84 MFHM   87 (329)
T ss_pred             HHHH
Confidence            6544

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0578|consensus

Probab=96.78  E-value=0.0022  Score=52.30  Aligned_cols=77  Identities=22%  Similarity=0.429  Sum_probs=53.5

Q ss_pred             cCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCC
Q psy11428         36 SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD  115 (160)
Q Consensus        36 ~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~  115 (160)
                      ..+.+|+..+.-.+..++.+.......+....   +...+..+     ..++|+|+|.+++.+-..+.+|.+|||+.||+
T Consensus       285 aSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keL---ilnEi~Vm-----~~~~H~NiVnfl~Sylv~deLWVVMEym~ggs  356 (550)
T KOG0578|consen  285 ATGGVYVARKISTKQEVAIKRMDLRKQPKKEL---LLNEILVM-----RDLHHPNIVNFLDSYLVGDELWVVMEYMEGGS  356 (550)
T ss_pred             cccceeeeeeccCCceEEEEEEEeccCCchhh---hHHHHHHH-----HhccchHHHHHHHHhcccceeEEEEeecCCCc
Confidence            44678888887776666665444333332222   22222233     24789999999999999999999999999999


Q ss_pred             cccce
Q psy11428        116 LARIV  120 (160)
Q Consensus       116 l~~ii  120 (160)
                      |.+++
T Consensus       357 LTDvV  361 (550)
T KOG0578|consen  357 LTDVV  361 (550)
T ss_pred             hhhhh
Confidence            97654

>KOG0192|consensus

Probab=96.77  E-value=0.011  Score=46.69  Aligned_cols=38  Identities=29%  Similarity=0.577  Sum_probs=35.2

Q ss_pred             hcCCCceeEEeeeeecCC-eeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQ-HVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~-~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++.|||||+++..+.+.. .+.+||||+.+|+|..++|+
T Consensus        95 ~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~  133 (362)
T KOG0192|consen   95 RLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLSVLLHK  133 (362)
T ss_pred             hCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHHHHHhh
Confidence            589999999999998888 79999999999999988877

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=96.75  E-value=0.0049  Score=47.34  Aligned_cols=80  Identities=25%  Similarity=0.326  Sum_probs=51.4

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+......................+     ..++|||+++++..+...+..+++|||+.+++|.
T Consensus        15 g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~-----~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   89 (330)
T cd05601          15 GEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDIL-----SISNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLL   89 (330)
T ss_pred             EEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHH-----HhCCCCCCcceeeEEecCCeEEEEECCCCCCCHH
Confidence            46787777666666665544332211111111122222211     2478999999999999999999999999999997


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++.+
T Consensus        90 ~~l~~   94 (330)
T cd05601          90 SLLNR   94 (330)
T ss_pred             HHHHH
Confidence            76654

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=96.73  E-value=0.014  Score=43.76  Aligned_cols=38  Identities=29%  Similarity=0.433  Sum_probs=33.2

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ..++|||++++...+...+..+++|||+.+++|...++
T Consensus        48 ~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~   85 (280)
T cd05608          48 AKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDLRYHIY   85 (280)
T ss_pred             HhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCHHHHHH
Confidence            35789999999999999999999999999999865543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=96.70  E-value=0.0066  Score=46.59  Aligned_cols=80  Identities=20%  Similarity=0.330  Sum_probs=50.1

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCC-HHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|++.+...+..++.+........ ......+..+.    .. -...+.|||+++++..+...+..+++|||+.+++|
T Consensus         9 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~----~~-~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L   83 (323)
T cd05575           9 GKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAER----NV-LLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGGEL   83 (323)
T ss_pred             eEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHH----HH-HHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCCCH
Confidence            56777777666655665544332111 11111111111    11 12357899999999999999999999999999998


Q ss_pred             ccceec
Q psy11428        117 ARIVHR  122 (160)
Q Consensus       117 ~~iih~  122 (160)
                      ...+.+
T Consensus        84 ~~~l~~   89 (323)
T cd05575          84 FFHLQR   89 (323)
T ss_pred             HHHHHh
Confidence            655543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=96.69  E-value=0.0055  Score=48.87  Aligned_cols=39  Identities=33%  Similarity=0.662  Sum_probs=34.7

Q ss_pred             hc-CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         85 EL-HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        85 ~l-~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      .+ .|||+++++..+.....++++||||.+|+|..+++..
T Consensus        96 ~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~  135 (400)
T cd05105          96 HLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKN  135 (400)
T ss_pred             hcCCCCCeeeEEEEEccCCceEEEEEecCCCcHHHHHHHh
Confidence            35 4999999999999999999999999999998877654

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=96.69  E-value=0.011  Score=44.34  Aligned_cols=38  Identities=29%  Similarity=0.410  Sum_probs=33.3

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||+++++..+...+..+++|||+.++++...+.+
T Consensus        56 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   93 (285)
T cd05605          56 KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYN   93 (285)
T ss_pred             hcCCCCEeeeeeeecCCCeEEEEEeccCCCcHHHHHHh
Confidence            57899999999999999999999999999998655543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0582|consensus

Probab=96.68  E-value=0.01  Score=47.60  Aligned_cols=76  Identities=22%  Similarity=0.348  Sum_probs=49.2

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      ..+++......+.-++.+...-..+...     +..+..++..+  .-++||||+.++..|-..+.+|.||.|+++|++.
T Consensus        40 a~V~~A~c~p~~e~VAIK~inLEkc~~~-----ld~l~kE~~~m--sl~~HPNIv~~~~sFvv~~~LWvVmpfMa~GS~l  112 (516)
T KOG0582|consen   40 AVVYLARCIPTNEVVAIKIINLEKCNND-----LDALRKEVQTM--SLIDHPNIVTYHCSFVVDSELWVVMPFMAGGSLL  112 (516)
T ss_pred             eEeeeeeecccCCEEEEEEeehhhhhhh-----HHHHHHHHHHh--hhcCCCCcceEEEEEEecceeEEeehhhcCCcHH
Confidence            4566666655554445444333222211     22233333332  2378999999999999999999999999999986


Q ss_pred             cce
Q psy11428        118 RIV  120 (160)
Q Consensus       118 ~ii  120 (160)
                      +++
T Consensus       113 dIi  115 (516)
T KOG0582|consen  113 DII  115 (516)
T ss_pred             HHH
Confidence            554

>PHA02988 hypothetical protein; Provisional

Probab=96.66  E-value=0.023  Score=42.81  Aligned_cols=39  Identities=15%  Similarity=0.468  Sum_probs=32.3

Q ss_pred             hhcCCCceeEEeeeeec----CCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKES----DQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~----~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .++.|||+++++..+.+    ...++++|||+.+|+|..++..
T Consensus        73 ~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~  115 (283)
T PHA02988         73 RRIDSNNILKIYGFIIDIVDDLPRLSLILEYCTRGYLREVLDK  115 (283)
T ss_pred             HhcCCCCEEEEeeeEEecccCCCceEEEEEeCCCCcHHHHHhh
Confidence            35789999999988766    4578999999999999777654

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=96.65  E-value=0.014  Score=43.01  Aligned_cols=81  Identities=25%  Similarity=0.351  Sum_probs=51.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+.....+...............   +..++..  ..++.|||++++...++.....++++||+.+++|.
T Consensus         7 ~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~---~~~e~~~--l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   81 (262)
T cd05572           7 GRVELVKVKSKNRTFALKCVKKRHIVETGQQEH---IFSEKEI--LEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGELW   81 (262)
T ss_pred             eEEEEEEECCCCcEEEEEEEehhcchhhhHHHH---HHHHHHH--HHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcHH
Confidence            456777765545555554443322221111111   1222221  23578999999999999999999999999999997


Q ss_pred             cceecC
Q psy11428        118 RIVHRD  123 (160)
Q Consensus       118 ~iih~d  123 (160)
                      .++.+.
T Consensus        82 ~~l~~~   87 (262)
T cd05572          82 TILRDR   87 (262)
T ss_pred             HHHhhc
Confidence            777654

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=96.64  E-value=0.0091  Score=45.84  Aligned_cols=79  Identities=20%  Similarity=0.324  Sum_probs=49.0

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCC-CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|++.+...+..++.++..+... .......+..+.    . .-...+.|||+++++..++..+..+++|||+.++++
T Consensus         9 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~----~-~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L   83 (325)
T cd05604           9 GKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAER----N-VLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGEL   83 (325)
T ss_pred             eEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHH----H-HHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCCCH
Confidence            4677777655555555554433211 111111111111    1 112347899999999999999999999999999988


Q ss_pred             cccee
Q psy11428        117 ARIVH  121 (160)
Q Consensus       117 ~~iih  121 (160)
                      ...+.
T Consensus        84 ~~~l~   88 (325)
T cd05604          84 FFHLQ   88 (325)
T ss_pred             HHHHH
Confidence            65543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>KOG0597|consensus

Probab=96.63  E-value=0.0018  Score=53.37  Aligned_cols=80  Identities=28%  Similarity=0.406  Sum_probs=51.0

Q ss_pred             cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCccc
Q psy11428         39 HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR  118 (160)
Q Consensus        39 ~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~  118 (160)
                      .+|.........-++.+...+..-++.++..+.    ++++.+  +.+.||||+.+++++++...+++|.|||.| +|..
T Consensus        17 ~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~----~ev~i~--r~lkHpniv~m~esfEt~~~~~vVte~a~g-~L~~   89 (808)
T KOG0597|consen   17 RVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLR----QEVRIL--RSLKHPNIVEMLESFETSAHLWVVTEYAVG-DLFT   89 (808)
T ss_pred             eeeecccccceeEEEEEEehhcCCchHHHHHHH----HHHHHH--HhcCCcchhhHHHhhcccceEEEEehhhhh-hHHH
Confidence            344444434333444444444444444443322    222222  358999999999999999999999999999 7766


Q ss_pred             ceecCCC
Q psy11428        119 IVHRDLK  125 (160)
Q Consensus       119 iih~dlk  125 (160)
                      ++-.|-+
T Consensus        90 il~~d~~   96 (808)
T KOG0597|consen   90 ILEQDGK   96 (808)
T ss_pred             HHHhccC
Confidence            6655543

>KOG4721|consensus

Probab=96.61  E-value=0.0023  Score=52.97  Aligned_cols=40  Identities=23%  Similarity=0.499  Sum_probs=35.3

Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARI  119 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~i  119 (160)
                      ..|++.|.||||+.+..++.....+-++||||..|-|..+
T Consensus       163 IKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL~~V  202 (904)
T KOG4721|consen  163 IKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQLYEV  202 (904)
T ss_pred             HHHHHhccCcceeeEeeeecCCceeEEeeeccccccHHHH
Confidence            3456679999999999999999999999999999988665

>KOG0580|consensus

Probab=96.61  E-value=0.00095  Score=49.37  Aligned_cols=77  Identities=21%  Similarity=0.352  Sum_probs=48.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhh-hhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV-KELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|++.+.-++--++-++..+..+....+.   .|+   .+++.. ++|.||||.+++.+|.+...+|+++||+.+|.+
T Consensus        36 G~vYlarekks~~IvalKVlfKsqi~~~~v~---~ql---rREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~~gel  109 (281)
T KOG0580|consen   36 GNVYLAREKKSLFIVALKVLFKSQILKTQVE---HQL---RREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAPRGEL  109 (281)
T ss_pred             ccEeEeeeccCCcEEEEeeeeHHHHHHhcch---hhh---hheeEeecccCCccHHhhhhheeccceeEEEEEecCCchH
Confidence            4688888766554444433322211111111   111   122222 469999999999999999999999999999988


Q ss_pred             ccce
Q psy11428        117 ARIV  120 (160)
Q Consensus       117 ~~ii  120 (160)
                      ...+
T Consensus       110 ~k~L  113 (281)
T KOG0580|consen  110 YKDL  113 (281)
T ss_pred             HHHH
Confidence            6543

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=96.60  E-value=0.015  Score=44.89  Aligned_cols=78  Identities=24%  Similarity=0.357  Sum_probs=48.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHH-HHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSED-TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|++.+...+..++.++..+...... ....+..+ ...+.    ....|||+++++..+......+++|||+.+++|
T Consensus         9 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E-~~~l~----~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~~L   83 (329)
T cd05618           9 AKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTE-KHVFE----QASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL   83 (329)
T ss_pred             eEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHH-HHHHH----hcCCCCcCCceeeEEEeCCEEEEEEeCCCCCCH
Confidence            5677777665555566555443322211 11111111 11111    124799999999999999999999999999988


Q ss_pred             ccce
Q psy11428        117 ARIV  120 (160)
Q Consensus       117 ~~ii  120 (160)
                      ...+
T Consensus        84 ~~~~   87 (329)
T cd05618          84 MFHM   87 (329)
T ss_pred             HHHH
Confidence            5544

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	160
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-12
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		4e-12
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		1e-11
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-11
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-11
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-11
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		2e-11
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		2e-11
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-11
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-11
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		6e-11
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		7e-11
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		7e-11
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		7e-11
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-10
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		5e-10
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		6e-10
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		9e-10
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		9e-10
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		1e-09
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		1e-09
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		1e-09
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		1e-09
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		1e-09
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-09
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-09
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		1e-09
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		1e-09
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-09
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		1e-09
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-09
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-09
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-09
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		3e-09
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		3e-09
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		3e-09
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		3e-09
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		3e-09
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		4e-09
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		4e-09
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		4e-09
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		4e-09
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		8e-09
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		8e-09
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		8e-09
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-08
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		1e-08
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		1e-08
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		1e-08
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		1e-08
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-08
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		2e-08
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		2e-08
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-08
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-08
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		3e-08
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		4e-08
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		4e-08
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		4e-08
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		4e-08
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		7e-08
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		7e-08
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		8e-08
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		9e-08
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		9e-08
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		9e-08
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		9e-08
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		1e-07
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-07
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		1e-07
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-07
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-07
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-07
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-07
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-07
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		1e-07
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-07
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-07
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-07
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-07
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-07
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-07
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		1e-07
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-07
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-07
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-07
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-07
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		2e-07
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-07
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		3e-07
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		3e-07
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		3e-07
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		3e-07
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-07
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		4e-07
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		4e-07
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		5e-07
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		5e-07
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-07
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		6e-07
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		6e-07
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		9e-07
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		9e-07
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		9e-07
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-06
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		1e-06
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-06
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-06
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-06
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		1e-06
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		1e-06
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		1e-06
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-06
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		2e-06
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-06
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		2e-06
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-06
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-06
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		2e-06
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-06
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		2e-06
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		2e-06
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		2e-06
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		2e-06
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		2e-06
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		2e-06
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		3e-06
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		3e-06
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		3e-06
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		3e-06
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		3e-06
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-06
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		4e-06
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		4e-06
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		5e-06
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		8e-06
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		8e-06
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		9e-06
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		1e-05
3g51_A	325	Structural Diversity Of The Active Conformation Of		1e-05
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-05
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-05
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-05
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		1e-05
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-05
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-05
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		1e-05
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		1e-05
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		1e-05
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-05
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		1e-05
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		1e-05
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		1e-05
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		1e-05
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		1e-05
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		1e-05
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		1e-05
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		1e-05
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-05
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-05
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		1e-05
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		1e-05
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		1e-05
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		1e-05
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		1e-05
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		1e-05
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		1e-05
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		1e-05
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		1e-05
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		1e-05
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		1e-05
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		1e-05
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		2e-05
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-05
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-05
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-05
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		2e-05
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		2e-05
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		2e-05
4fie_A	423	Full-Length Human Pak4 Length = 423		2e-05
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-05
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-05
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-05
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		2e-05
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		2e-05
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		2e-05
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-05
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-05
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		3e-05
3soa_A	444	Full-Length Human Camkii Length = 444		3e-05
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		3e-05
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-05
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-05
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		3e-05
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		3e-05
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		3e-05
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		3e-05
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		3e-05
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		3e-05
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		3e-05
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		3e-05
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		3e-05
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		3e-05
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		3e-05
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-05
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-05
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-05
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-05
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		4e-05
4ae6_A	343	Structure And Function Of The Human Sperm-specific		4e-05
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		4e-05
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		4e-05
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		4e-05
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		4e-05
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		4e-05
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		4e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		4e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		4e-05
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		4e-05
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-05
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-05
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		4e-05
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-05
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		4e-05
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		4e-05
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-05
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-05
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		4e-05
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		4e-05
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		4e-05
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		4e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		4e-05
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		4e-05
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		4e-05
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		4e-05
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		4e-05
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		4e-05
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		4e-05
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		4e-05
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		4e-05
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		5e-05
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		5e-05
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		6e-05
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		7e-05
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		7e-05
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		7e-05
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		8e-05
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		8e-05
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		8e-05
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		8e-05
1fvr_A	327	Tie2 Kinase Domain Length = 327		8e-05
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		8e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		9e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		9e-05
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		9e-05
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		9e-05
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		1e-04
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		1e-04
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-04
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		1e-04
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-04
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		1e-04
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-04
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-04
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		1e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		1e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		1e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		1e-04
4ae9_A	343	Structure And Function Of The Human Sperm-specific		1e-04
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-04
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-04
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-04
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		1e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		2e-04
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		2e-04
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		2e-04
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		2e-04
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-04
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		2e-04
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		2e-04
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		2e-04
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		2e-04
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		2e-04
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-04
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-04
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		2e-04
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		2e-04
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		2e-04
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		2e-04
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		2e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		2e-04
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		3e-04
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		3e-04
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-04
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-04
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		3e-04
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		3e-04
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		3e-04
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		3e-04
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		4e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		4e-04
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		4e-04
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		4e-04
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		4e-04
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		4e-04
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		4e-04
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		4e-04
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		5e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		5e-04
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		5e-04
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		5e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		5e-04
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		5e-04
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		5e-04
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		5e-04
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		5e-04
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		5e-04
3kk8_A	284	Camkii Substrate Complex A Length = 284		5e-04
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		5e-04
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		6e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		6e-04
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		6e-04
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		6e-04
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		6e-04
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		6e-04
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		6e-04
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		6e-04
3kk9_A	282	Camkii Substrate Complex B Length = 282		6e-04
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		6e-04
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		6e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		6e-04
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		6e-04
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		7e-04
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		7e-04
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		7e-04
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		7e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		7e-04
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		7e-04
3b2t_A	311	Structure Of Phosphotransferase Length = 311		7e-04
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		7e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		7e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		7e-04
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		7e-04
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		7e-04
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		7e-04
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		7e-04
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		8e-04

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+H N+V+L    E+++ +YL+ME+ +GG++ DYLV+ G + E   R   +QIV A++  
Sbjct: 68  LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ-- 125
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C +                  RIVHRDLK +N+LL          
Sbjct: 126 --------------YCHQK-----------------RIVHRDLKAENLLLDAD------- 147
Query: 142 PQHIKLKIADFGFA 155
              + +KIADFGF+
Sbjct: 148 ---MNIKIADFGFS 158

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+H N+V+L    E+++ +YL+ME+ +GG++ DYLV+ G + E   R   +QIV A++  
Sbjct: 71  LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQ-- 128
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C +                  RIVHRDLK +N+LL          
Sbjct: 129 --------------YCHQK-----------------RIVHRDLKAENLLLDAD------- 150
Query: 142 PQHIKLKIADFGFA 155
              + +KIADFGF+
Sbjct: 151 ---MNIKIADFGFS 161

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+H N+V+L    E+++ +YLVME+ +GG++ DYLV+ G + E   R   +QIV A++  
Sbjct: 71  LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-- 128
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C +                   IVHRDLK +N+LL          
Sbjct: 129 --------------YCHQK-----------------YIVHRDLKAENLLLDGD------- 150
Query: 142 PQHIKLKIADFGFA 155
              + +KIADFGF+
Sbjct: 151 ---MNIKIADFGFS 161

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+H N+V+L    E+++ +YLVME+ +GG++ DYLV+ G + E   R   +QIV A++  
Sbjct: 70  LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-- 127
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C +                   IVHRDLK +N+LL          
Sbjct: 128 --------------YCHQK-----------------FIVHRDLKAENLLLDAD------- 149
Query: 142 PQHIKLKIADFGFA 155
              + +KIADFGF+
Sbjct: 150 ---MNIKIADFGFS 160

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+H N+V+L    E+++ +YLVME+ +GG++ DYLV+ G + E   R   +QIV A++  
Sbjct: 70  LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-- 127
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C +                   IVHRDLK +N+LL          
Sbjct: 128 --------------YCHQK-----------------FIVHRDLKAENLLLDAD------- 149
Query: 142 PQHIKLKIADFGFA 155
              + +KIADFGF+
Sbjct: 150 ---MNIKIADFGFS 160

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+H N+V+L    E+++ +YLVME+ +GG++ DYLV+ G + E   R   +QIV A++  
Sbjct: 70  LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-- 127
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C +                   IVHRDLK +N+LL          
Sbjct: 128 --------------YCHQK-----------------FIVHRDLKAENLLLDAD------- 149
Query: 142 PQHIKLKIADFGFA 155
              + +KIADFGF+
Sbjct: 150 ---MNIKIADFGFS 160

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+H N+V+L    E+++ +YLVME+ +GG++ DYLV+ G + E   R   +QIV A++  
Sbjct: 63  LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQ-- 120
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C +                   IVHRDLK +N+LL          
Sbjct: 121 --------------YCHQK-----------------FIVHRDLKAENLLLDAD------- 142
Query: 142 PQHIKLKIADFGFA 155
              + +KIADFGF+
Sbjct: 143 ---MNIKIADFGFS 153

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+H N+V+L    E+++ +YLVME+ +GG++ DYLV+ G + E   R   +QIV A++  
Sbjct: 70  LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-- 127
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C +                   IVHRDLK +N+LL          
Sbjct: 128 --------------YCHQK-----------------FIVHRDLKAENLLLDAD------- 149
Query: 142 PQHIKLKIADFGFA 155
              + +KIADFGF+
Sbjct: 150 ---MNIKIADFGFS 160

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+H N+V+L    E+++ +YLVME+ +GG++ DYLV+ G + E   R   +QIV A++  
Sbjct: 70  LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQ-- 127
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C +                   IVHRDLK +N+LL          
Sbjct: 128 --------------YCHQK-----------------FIVHRDLKAENLLLDAD------- 149
Query: 142 PQHIKLKIADFGFA 155
              + +KIADFGF+
Sbjct: 150 ---MNIKIADFGFS 160

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 43/141 (30%)
Query: 20  TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALK 79
           ++L H+N+V ++   E D   YLVME+  G  L++Y+ S G LS DT   F  QI+  +K
Sbjct: 66  SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIK 125
Query: 80  AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
                           H  +                  RIVHRD+KPQNIL+        
Sbjct: 126 ----------------HAHD-----------------MRIVHRDIKPQNILID------- 145
Query: 140 PQPQHIKLKIADFGFARFLQD 160
               +  LKI DFG A+ L +
Sbjct: 146 ---SNKTLKIFDFGIAKALSE 163

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H N++ L    E+   V L++E  +GG+L D+L  K +L+ED    FLKQI+   
Sbjct: 83  LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG- 141
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                        V  LH K                   RI H DLKP+NI+L     K 
Sbjct: 142 -------------VHYLHSK-------------------RIAHFDLKPENIML---LDKN 166
Query: 139 YPQPQHIKLKIADFGFA 155
            P P   ++K+ DFG A
Sbjct: 167 VPNP---RIKLIDFGIA 180

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H N++ L    E+   V L++E  +GG+L D+L  K +L+ED    FLKQI+   
Sbjct: 62  LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG- 120
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                        V  LH K                   RI H DLKP+NI+L     K 
Sbjct: 121 -------------VHYLHSK-------------------RIAHFDLKPENIML---LDKN 145
Query: 139 YPQPQHIKLKIADFGFA 155
            P P   ++K+ DFG A
Sbjct: 146 VPNP---RIKLIDFGIA 159

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 40/139 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ HEN+V L    ES  H+YLVM+  +GG+L D +V KG  +E      ++Q++ A 
Sbjct: 74  LRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA- 132
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               V  LH                               IVHRDLKP+N+L        
Sbjct: 133 ----VYYLHRMG----------------------------IVHRDLKPENLLY------- 153
Query: 139 YPQPQHIKLKIADFGFARF 157
           Y Q +  K+ I+DFG ++ 
Sbjct: 154 YSQDEESKIMISDFGLSKM 172

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H N++ L    E+   V L++E  +GG+L D+L  K +L+ED    FLKQI+   
Sbjct: 69  LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDG- 127
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                        V  LH K                   RI H DLKP+NI+L     K 
Sbjct: 128 -------------VHYLHSK-------------------RIAHFDLKPENIML---LDKN 152
Query: 139 YPQPQHIKLKIADFGFA 155
            P P   ++K+ DFG A
Sbjct: 153 VPNP---RIKLIDFGIA 166

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 66/149 (44%), Gaps = 40/149 (26%)
Query: 11  LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           + R  +  L  L H N+++L    E+   + LV+E   GG+L D +V KG  SE      
Sbjct: 94  IVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADA 153
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
           +KQI++A+         HEN                            IVHRDLKP+N+L
Sbjct: 154 VKQILEAVAYL------HEN---------------------------GIVHRDLKPENLL 180
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
            +       P P    LKIADFG ++ ++
Sbjct: 181 YAT------PAPDA-PLKIADFGLSKIVE 202

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 60.1 bits (144), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+H N+V+L    E+++ +YLV E+ +GG++ DYLV+ G   E   R   +QIV A++  
Sbjct: 70  LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQ-- 127
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C +                   IVHRDLK +N+LL          
Sbjct: 128 --------------YCHQK-----------------FIVHRDLKAENLLLDAD------- 149
Query: 142 PQHIKLKIADFGFA 155
                +KIADFGF+
Sbjct: 150 ---XNIKIADFGFS 160

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 124
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 125 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 151
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 152 VPKP---RIKIIDFGLA 165

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 124
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 125 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 151
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 152 VPKP---RIKIIDFGLA 165

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 124
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 125 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 151
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 152 VPKP---RIKIIDFGLA 165

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 67  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 123
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 124 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 150
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 151 VPKP---RIKIIDFGLA 164

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 124
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 125 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 151
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 152 VPKP---RIKIIDFGLA 165

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 124
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 125 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 151
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 152 VPKP---RIKIIDFGLA 165

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 124
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 125 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 151
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 152 VPKP---RIKIIDFGLA 165

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 124
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 125 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 151
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 152 VPKP---RIKIIDFGLA 165

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 67  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 123
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 124 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 150
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 151 VPKP---RIKIIDFGLA 164

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 124
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 125 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 151
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 152 VPKP---RIKIIDFGLA 165

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 124
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 125 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 151
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 152 VPKP---RIKIIDFGLA 165

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 124
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 125 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 151
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 152 VPKP---RIKIIDFGLA 165

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 62/137 (45%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 124
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 125 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 151
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 152 VPKP---RIKIIDFGLA 165

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 39/142 (27%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ H NV+ L    E+   V L++E  +GG+L D+L  K +LSE+    F+KQI+   
Sbjct: 69  LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG- 127
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                        V  LH K                   +I H DLKP+NI+L     K 
Sbjct: 128 -------------VNYLHTK-------------------KIAHFDLKPENIML---LDKN 152
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
            P P HIKL   DFG A  ++D
Sbjct: 153 IPIP-HIKL--IDFGLAHEIED 171

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 39/142 (27%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ H NV+ L    E+   V L++E  +GG+L D+L  K +LSE+    F+KQI+   
Sbjct: 69  LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG- 127
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                        V  LH K                   +I H DLKP+NI+L     K 
Sbjct: 128 -------------VNYLHTK-------------------KIAHFDLKPENIML---LDKN 152
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
            P P HIKL   DFG A  ++D
Sbjct: 153 IPIP-HIKL--IDFGLAHEIED 171

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 39/142 (27%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ H NV+ L    E+   V L++E  +GG+L D+L  K +LSE+    F+KQI+   
Sbjct: 69  LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG- 127
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                        V  LH K                   +I H DLKP+NI+L     K 
Sbjct: 128 -------------VNYLHTK-------------------KIAHFDLKPENIML---LDKN 152
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
            P P HIKL   DFG A  ++D
Sbjct: 153 IPIP-HIKL--IDFGLAHEIED 171

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 39/142 (27%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ H NV+ L    E+   V L++E  +GG+L D+L  K +LSE+    F+KQI+   
Sbjct: 69  LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG- 127
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                        V  LH K                   +I H DLKP+NI+L     K 
Sbjct: 128 -------------VNYLHTK-------------------KIAHFDLKPENIML---LDKN 152
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
            P P HIKL   DFG A  ++D
Sbjct: 153 IPIP-HIKL--IDFGLAHEIED 171

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 39/142 (27%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ H NV+ L    E+   V L++E  +GG+L D+L  K +LSE+    F+KQI+   
Sbjct: 69  LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG- 127
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                        V  LH K                   +I H DLKP+NI+L     K 
Sbjct: 128 -------------VNYLHTK-------------------KIAHFDLKPENIML---LDKN 152
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
            P P HIKL   DFG A  ++D
Sbjct: 153 IPIP-HIKL--IDFGLAHEIED 171

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 65/142 (45%), Gaps = 39/142 (27%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ H N++ L    E+   V L++E  +GG+L D+L  K +LSE+    F+KQI+   
Sbjct: 69  LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG- 127
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                        V  LH K                   +I H DLKP+NI+L     K 
Sbjct: 128 -------------VNYLHTK-------------------KIAHFDLKPENIML---LDKN 152
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
            P P HIKL   DFG A  ++D
Sbjct: 153 IPIP-HIKL--IDFGLAHEIED 171

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 43/148 (29%)
Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           R  ++ L    H ++++L     +   +++VME+ +GG+L DY+   G L E   R   +
Sbjct: 64  RREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQ 123
Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           QI+  +                 +C     H ++V            VHRDLKP+N+LL 
Sbjct: 124 QILSGVD----------------YC-----HRHMV------------VHRDLKPENVLLD 150
Query: 133 HSFGKQYPQPQHIKLKIADFGFARFLQD 160
                      H+  KIADFG +  + D
Sbjct: 151 ----------AHMNAKIADFGLSNMMSD 168

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 61/137 (44%), Gaps = 39/137 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L+ E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQIL--- 124
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                      N V  LH                     +I H DLKP+NI+L     + 
Sbjct: 125 -----------NGVYYLHS-------------------LQIAHFDLKPENIML---LDRN 151
Query: 139 YPQPQHIKLKIADFGFA 155
            P+P   ++KI DFG A
Sbjct: 152 VPKP---RIKIIDFGLA 165

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 44/139 (31%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H ++++L    +S   + +V+E+  G +L DY+V +  +SE   R F +QI+ A+   
Sbjct: 71  LRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAV--- 126
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                                      E+C+     +IVHRDLKP+N+LL          
Sbjct: 127 ---------------------------EYCH---RHKIVHRDLKPENLLLD--------- 147
Query: 142 PQHIKLKIADFGFARFLQD 160
            +H+ +KIADFG +  + D
Sbjct: 148 -EHLNVKIADFGLSNIMTD 165

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 44/139 (31%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H ++++L    +S   + +V+E+  G +L DY+V +  +SE   R F +QI+ A+   
Sbjct: 70  LRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAV--- 125
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                                      E+C+     +IVHRDLKP+N+LL          
Sbjct: 126 ---------------------------EYCH---RHKIVHRDLKPENLLLD--------- 146
Query: 142 PQHIKLKIADFGFARFLQD 160
            +H+ +KIADFG +  + D
Sbjct: 147 -EHLNVKIADFGLSNIMTD 164

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 44/139 (31%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H ++++L    +S   + +V+E+  G +L DY+V +  +SE   R F +QI+ A+   
Sbjct: 61  LRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAV--- 116
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                                      E+C+     +IVHRDLKP+N+LL          
Sbjct: 117 ---------------------------EYCHR---HKIVHRDLKPENLLLD--------- 137
Query: 142 PQHIKLKIADFGFARFLQD 160
            +H+ +KIADFG +  + D
Sbjct: 138 -EHLNVKIADFGLSNIMTD 155

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 44/139 (31%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H ++++L    +S   + +V+E+  G +L DY+V +  +SE   R F +QI+ A+   
Sbjct: 65  LRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAV--- 120
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                                      E+C+     +IVHRDLKP+N+LL          
Sbjct: 121 ---------------------------EYCH---RHKIVHRDLKPENLLLD--------- 141
Query: 142 PQHIKLKIADFGFARFLQD 160
            +H+ +KIADFG +  + D
Sbjct: 142 -EHLNVKIADFGLSNIMTD 159

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 44/139 (31%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H ++++L     +   + +V+E+  GG+L DY+V K  ++ED  R F +QI+ A+   
Sbjct: 66  LRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAI--- 121
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                                      E+C+     +IVHRDLKP+N+LL          
Sbjct: 122 ---------------------------EYCH---RHKIVHRDLKPENLLLD--------- 142
Query: 142 PQHIKLKIADFGFARFLQD 160
             ++ +KIADFG +  + D
Sbjct: 143 -DNLNVKIADFGLSNIMTD 160

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 46/148 (31%)
Query: 19  LTELHHENVVELLH--CKESDQHVYLVMEFCNGGDLADYLVSKGT-----LSEDTIRIFL 71
           L EL H N+V         ++  +Y+VME+C GGDLA  +++KGT     L E+ +   +
Sbjct: 59  LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVM 117
Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
            Q+  AL     KE H  +                     +GG    ++HRDLKP N+ L
Sbjct: 118 TQLTLAL-----KECHRRS---------------------DGGHT--VLHRDLKPANVFL 149
Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQ 159
               GKQ        +K+ DFG AR L 
Sbjct: 150 D---GKQ-------NVKLGDFGLARILN 167

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 56.2 bits (134), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 46/148 (31%)
Query: 19  LTELHHENVVELLH--CKESDQHVYLVMEFCNGGDLADYLVSKGT-----LSEDTIRIFL 71
           L EL H N+V         ++  +Y+VME+C GGDLA  +++KGT     L E+ +   +
Sbjct: 59  LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVM 117
Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
            Q+  AL     KE H  +                     +GG    ++HRDLKP N+ L
Sbjct: 118 TQLTLAL-----KECHRRS---------------------DGGHT--VLHRDLKPANVFL 149
Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQ 159
               GKQ        +K+ DFG AR L 
Sbjct: 150 D---GKQ-------NVKLGDFGLARILN 167

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 67/163 (41%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L  C + D+ +Y  + +   G+L  Y+
Sbjct: 69  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYI 128
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 129 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 156
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 157 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 188

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 47/148 (31%), Positives = 67/148 (45%), Gaps = 46/148 (31%)
Query: 19  LTELHHENVVELLH--CKESDQHVYLVMEFCNGGDLADYLVSKGT-----LSEDTIRIFL 71
           L EL H N+V         ++  +Y+VME+C GGDLA  +++KGT     L E+ +   +
Sbjct: 59  LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVM 117
Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
            Q+  AL     KE H  +                     +GG    ++HRDLKP N+ L
Sbjct: 118 TQLTLAL-----KECHRRS---------------------DGGHT--VLHRDLKPANVFL 149
Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQ 159
               GKQ        +K+ DFG AR L 
Sbjct: 150 D---GKQ-------NVKLGDFGLARILN 167

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 45/142 (31%)
Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
           HIL+++    H +++ L+   ES   ++LV +    G+L DYL  K  LSE   R  ++ 
Sbjct: 151 HILRQVA--GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRS 208
Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           +++A     V  LH  N                            IVHRDLKP+NILL  
Sbjct: 209 LLEA-----VSFLHANN----------------------------IVHRDLKPENILLD- 234
Query: 134 SFGKQYPQPQHIKLKIADFGFA 155
                     +++++++DFGF+
Sbjct: 235 ---------DNMQIRLSDFGFS 247

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 44/145 (30%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS---KG-TLSEDTIRIFLKQI 74
           L  L H N++++    E   ++Y+VME C GG+L + +VS   +G  LSE  +   +KQ+
Sbjct: 74  LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           + AL  F                    QHV               VH+DLKP+NIL   +
Sbjct: 134 MNALAYFH------------------SQHV---------------VHKDLKPENILFQDT 160
Query: 135 FGKQYPQPQHIKLKIADFGFARFLQ 159
                    H  +KI DFG A   +
Sbjct: 161 -------SPHSPIKIIDFGLAELFK 178

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 47/149 (31%), Positives = 60/149 (40%), Gaps = 49/149 (32%)
Query: 19  LTELHHENVVELLHCKESDQHV------YLVMEFCNGGDLADYLVSKGT---LSEDTIRI 69
           + +L+H NVV      +  Q +       L ME+C GGDL  YL        L E  IR 
Sbjct: 66  MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 125
Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            L  I  AL+        HEN                           RI+HRDLKP+NI
Sbjct: 126 LLSDISSALRYL------HEN---------------------------RIIHRDLKPENI 152
Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           +L        P PQ +  KI D G+A+ L
Sbjct: 153 VLQ-------PGPQRLIHKIIDLGYAKEL 174

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 47/149 (31%), Positives = 60/149 (40%), Gaps = 49/149 (32%)
Query: 19  LTELHHENVVELLHCKESDQHV------YLVMEFCNGGDLADYLVSKGT---LSEDTIRI 69
           + +L+H NVV      +  Q +       L ME+C GGDL  YL        L E  IR 
Sbjct: 67  MKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRT 126
Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            L  I  AL+        HEN                           RI+HRDLKP+NI
Sbjct: 127 LLSDISSALRYL------HEN---------------------------RIIHRDLKPENI 153
Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           +L        P PQ +  KI D G+A+ L
Sbjct: 154 VLQ-------PGPQRLIHKIIDLGYAKEL 175

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 58/135 (42%), Gaps = 41/135 (30%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N+V       +  H+ +VME+ +GG+L + + + G  SED  R F +Q++      
Sbjct: 72  LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISG---- 127
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                     V   H  +                   + HRDLK +N LL  S     P 
Sbjct: 128 ----------VSYAHAMQ-------------------VAHRDLKLENTLLDGS-----PA 153
Query: 142 PQHIKLKIADFGFAR 156
           P   +LKIADFG+++
Sbjct: 154 P---RLKIADFGYSK 165

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 65/140 (46%), Gaps = 42/140 (30%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-DTIRIFLKQIVQA 77
           L ++ H N+V L    ES  H+YL+M+  +GG+L D +V KG  +E D  R+    I Q 
Sbjct: 70  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL----IFQV 125
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L A  VK LH                           DL  IVHRDLKP+N+L       
Sbjct: 126 LDA--VKYLH---------------------------DLG-IVHRDLKPENLLY------ 149
Query: 138 QYPQPQHIKLKIADFGFARF 157
            Y   +  K+ I+DFG ++ 
Sbjct: 150 -YSLDEDSKIMISDFGLSKM 168

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 40/139 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ H N+V L    ES  H+YL+M+  +GG+L D +V KG  +E      + Q++ A 
Sbjct: 70  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA- 128
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               VK LH                           DL  IVHRDLKP+N+L        
Sbjct: 129 ----VKYLH---------------------------DLG-IVHRDLKPENLLY------- 149
Query: 139 YPQPQHIKLKIADFGFARF 157
           Y   +  K+ I+DFG ++ 
Sbjct: 150 YSLDEDSKIMISDFGLSKM 168

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 40/139 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ H N+V L    ES  H+YL+M+  +GG+L D +V KG  +E      + Q++ A 
Sbjct: 70  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA- 128
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               VK LH                           DL  IVHRDLKP+N+L        
Sbjct: 129 ----VKYLH---------------------------DLG-IVHRDLKPENLLY------- 149
Query: 139 YPQPQHIKLKIADFGFARF 157
           Y   +  K+ I+DFG ++ 
Sbjct: 150 YSLDEDSKIMISDFGLSKM 168

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 40/139 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ H N+V L    ES  H+YL+M+  +GG+L D +V KG  +E      + Q++ A 
Sbjct: 70  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDA- 128
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               VK LH                           DL  IVHRDLKP+N+L        
Sbjct: 129 ----VKYLH---------------------------DLG-IVHRDLKPENLLY------- 149
Query: 139 YPQPQHIKLKIADFGFARF 157
           Y   +  K+ I+DFG ++ 
Sbjct: 150 YSLDEDSKIMISDFGLSKM 168

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 43/145 (29%)
Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           ++ L    H ++++L     +    ++VME+ +GG+L DY+   G + E   R   +QI+
Sbjct: 62  IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL 121
Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
            A+                              ++C+      +VHRDLKP+N+LL    
Sbjct: 122 SAV------------------------------DYCH---RHMVVHRDLKPENVLLD--- 145
Query: 136 GKQYPQPQHIKLKIADFGFARFLQD 160
                   H+  KIADFG +  + D
Sbjct: 146 -------AHMNAKIADFGLSNMMSD 163

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 62/145 (42%), Gaps = 43/145 (29%)
Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           ++ L    H ++++L     +    ++VME+ +GG+L DY+   G + E   R   +QI+
Sbjct: 62  IQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQIL 121
Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
            A+                              ++C+      +VHRDLKP+N+LL    
Sbjct: 122 SAV------------------------------DYCH---RHMVVHRDLKPENVLLD--- 145
Query: 136 GKQYPQPQHIKLKIADFGFARFLQD 160
                   H+  KIADFG +  + D
Sbjct: 146 -------AHMNAKIADFGLSNMMSD 163

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 41/135 (30%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N+V       +  H+ +VME+ +GG+L + + + G  SED  R F +Q++  +   
Sbjct: 71  LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS-- 128
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C          M+ C         HRDLK +N LL  S     P 
Sbjct: 129 --------------YCH--------AMQVC---------HRDLKLENTLLDGS-----PA 152
Query: 142 PQHIKLKIADFGFAR 156
           P   +LKI DFG+++
Sbjct: 153 P---RLKICDFGYSK 164

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 41/135 (30%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N+V       +  H+ +VME+ +GG+L + + + G  SED  R F +Q++  +   
Sbjct: 72  LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS-- 129
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C          M+ C         HRDLK +N LL  S     P 
Sbjct: 130 --------------YCH--------AMQVC---------HRDLKLENTLLDGS-----PA 153
Query: 142 PQHIKLKIADFGFAR 156
           P   +LKI DFG+++
Sbjct: 154 P---RLKICDFGYSK 165

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 70/146 (47%), Gaps = 29/146 (19%)
Query: 16  LKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQ 73
           LK +T+L  HEN+V LL        +YL+ E+C  GDL +YL SK    SED I  +  Q
Sbjct: 99  LKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIE-YENQ 157
Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLV---MEFCNGGDLARIVHRDLKPQNIL 130
                     K L  E  + +L  ++     Y V   MEF    +    VHRDL  +N+L
Sbjct: 158 ----------KRLEEEEDLNVLTFEDLLCFAYQVAKGMEFL---EFKSCVHRDLAARNVL 204
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           ++H  GK         +KI DFG AR
Sbjct: 205 VTH--GKV--------VKICDFGLAR 220

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 53.1 bits (126), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 45/139 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQA 77
           L EL H+N+V L     SD+ + LV EFC+  DL  Y  S  G L  + ++ FL Q+++ 
Sbjct: 55  LKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKG 113
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L                               FC+  +   ++HRDLKPQN+L++     
Sbjct: 114 LG------------------------------FCHSRN---VLHRDLKPQNLLIN----- 135
Query: 138 QYPQPQHIKLKIADFGFAR 156
                ++ +LK+ADFG AR
Sbjct: 136 -----RNGELKLADFGLAR 149

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 59/135 (43%), Gaps = 41/135 (30%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N+V       +  H+ ++ME+ +GG+L + + + G  SED  R F +Q++  +   
Sbjct: 73  LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVS-- 130
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C          M+ C         HRDLK +N LL  S     P 
Sbjct: 131 --------------YCHS--------MQIC---------HRDLKLENTLLDGS-----PA 154
Query: 142 PQHIKLKIADFGFAR 156
           P   +LKI DFG+++
Sbjct: 155 P---RLKICDFGYSK 166

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 43/132 (32%)
Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H N+++L    E++   +LV +    G+L DYL  K TLSE   R  ++ +++ + A   
Sbjct: 70  HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA--- 126
Query: 84  KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQ 143
             LH  N                            IVHRDLKP+NILL            
Sbjct: 127 --LHKLN----------------------------IVHRDLKPENILLDDD--------- 147
Query: 144 HIKLKIADFGFA 155
            + +K+ DFGF+
Sbjct: 148 -MNIKLTDFGFS 158

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 58/138 (42%), Gaps = 39/138 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L EL H N++EL      +  ++L+ E+    DL  Y+     +S   I+ FL Q++  +
Sbjct: 87  LKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGV 145
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                                          FC+     R +HRDLKPQN+LLS S   +
Sbjct: 146 N------------------------------FCHS---RRCLHRDLKPQNLLLSVSDASE 172
Query: 139 YPQPQHIKLKIADFGFAR 156
            P      LKI DFG AR
Sbjct: 173 TPV-----LKIGDFGLAR 185

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 43/132 (32%)
Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H N+++L    E++   +LV +    G+L DYL  K TLSE   R  ++ +++ + A   
Sbjct: 83  HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA--- 139
Query: 84  KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQ 143
             LH  N                            IVHRDLKP+NILL            
Sbjct: 140 --LHKLN----------------------------IVHRDLKPENILLD----------D 159
Query: 144 HIKLKIADFGFA 155
            + +K+ DFGF+
Sbjct: 160 DMNIKLTDFGFS 171

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 57/132 (43%), Gaps = 43/132 (32%)
Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H N+++L    E++   +LV +    G+L DYL  K TLSE   R  ++ +++ + A   
Sbjct: 83  HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICA--- 139
Query: 84  KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQ 143
             LH  N                            IVHRDLKP+NILL            
Sbjct: 140 --LHKLN----------------------------IVHRDLKPENILLD----------D 159
Query: 144 HIKLKIADFGFA 155
            + +K+ DFGF+
Sbjct: 160 DMNIKLTDFGFS 171

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 67  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 126
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 127 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 154
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 155 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 186

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 65  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 124
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 125 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 152
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 153 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 184

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 64  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 123
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 124 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 151
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 152 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 183

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 62  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 121
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 122 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 149
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 150 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 181

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 62  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 121
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 122 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 149
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 150 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 181

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 64  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 123
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 124 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 151
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 152 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 183

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 64  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 123
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 124 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 151
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 152 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 183

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 64  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 123
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 124 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 151
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 152 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 183

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 65  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 124
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 125 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 152
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 153 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 184

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 55/162 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 62  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 121
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 122 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 149
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
             I+HRDLKP+NILL+          + + ++I DFG A+ L
Sbjct: 150 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVL 180

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 55/162 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 62  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 121
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 122 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 149
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
             I+HRDLKP+NILL+          + + ++I DFG A+ L
Sbjct: 150 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVL 180

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 64  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 123
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 124 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 151
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 152 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 183

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 55/162 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 42  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 101
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 102 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGKG----------------- 130
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
             I+HRDLKP+NILL+          + + ++I DFG A+ L
Sbjct: 131 --IIHRDLKPENILLN----------EDMHIQITDFGTAKVL 160

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 55/162 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 41  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 100
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 101 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGKG----------------- 129
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
             I+HRDLKP+NILL+          + + ++I DFG A+ L
Sbjct: 130 --IIHRDLKPENILLN----------EDMHIQITDFGTAKVL 159

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 46  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 105
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 106 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 133
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 134 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 165

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 55/162 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 61  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 120
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 121 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 148
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
             I+HRDLKP+NILL+          + + ++I DFG A+ L
Sbjct: 149 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVL 179

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 55/162 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 61  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 120
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 121 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 148
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
             I+HRDLKP+NILL+          + + ++I DFG A+ L
Sbjct: 149 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVL 179

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 55/162 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 40  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 99
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 100 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGKG----------------- 128
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
             I+HRDLKP+NILL+          + + ++I DFG A+ L
Sbjct: 129 --IIHRDLKPENILLN----------EDMHIQITDFGTAKVL 158

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 55/162 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G+L  Y+
Sbjct: 39  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYI 98
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 99  RKIGSFDETCTRFYTAEIVSAL--------------EYLHGKG----------------- 127
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
             I+HRDLKP+NILL+          + + ++I DFG A+ L
Sbjct: 128 --IIHRDLKPENILLN----------EDMHIQITDFGTAKVL 157

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 44/140 (31%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSE-DTIRIFLKQIVQ 76
           + +L H N+++L    ES   + LVME+ +GG+L D ++ +   L+E DTI +F+KQI +
Sbjct: 140 MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTI-LFMKQICE 198
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
                 ++ +H                +Y             I+H DLKP+NIL  +   
Sbjct: 199 G-----IRHMH---------------QMY-------------ILHLDLKPENILCVNRDA 225
Query: 137 KQYPQPQHIKLKIADFGFAR 156
           KQ        +KI DFG AR
Sbjct: 226 KQ--------IKIIDFGLAR 237

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 47/162 (29%)
Query: 1   VATQSKSSIVLTRHILKELTELH---HENVVELLHCKESDQHVYLVMEFCNGGDLADYLV 57
           VA  + S  + T  + +E +  H   H ++VELL    SD  +Y+V EF +G DL   +V
Sbjct: 59  VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIV 118
Query: 58  SKG----TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNG 113
            +       SE     +++QI++AL+                +C +++            
Sbjct: 119 KRADAGFVYSEAVASHYMRQILEALR----------------YCHDNN------------ 150
Query: 114 GDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
                I+HRD+KP+N+LL+    K+   P    +K+ DFG A
Sbjct: 151 -----IIHRDVKPENVLLA---SKENSAP----VKLGDFGVA 180

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 53/165 (32%)
Query: 38  QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ----------VKELH 87
           +  ++ ME    G  ++  + K  L   T ++F  + ++   AF+          +K++ 
Sbjct: 8   RKTFIFMEVLGSGAFSEVFLVKQRL---TGKLFALKCIKKSPAFRDSSLENEIAVLKKIK 64
Query: 88  HENVVELLHCKESDQHVYLVMEFCNGGDL------------------------------- 116
           HEN+V L    ES  H YLVM+  +GG+L                               
Sbjct: 65  HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHE 124
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQP-QHIKLKIADFGFARFLQD 160
             IVHRDLKP+N+L        Y  P ++ K+ I DFG ++  Q+
Sbjct: 125 NGIVHRDLKPENLL--------YLTPEENSKIMITDFGLSKMEQN 161

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 45/139 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQA 77
           L EL H+N+V L     SD+ + LV EFC+  DL  Y  S  G L  + ++ FL Q+++ 
Sbjct: 55  LKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKG 113
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L                               FC+  +   ++HRDLKPQN+L++     
Sbjct: 114 LG------------------------------FCHSRN---VLHRDLKPQNLLIN----- 135
Query: 138 QYPQPQHIKLKIADFGFAR 156
                ++ +LK+A+FG AR
Sbjct: 136 -----RNGELKLANFGLAR 149

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 40/140 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L  L H N+++L    E  ++ YLV EF  GG+L + ++++    E      +KQI+   
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSG- 158
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               +  LH  N                            IVHRD+KP+NILL +     
Sbjct: 159 ----ICYLHKHN----------------------------IVHRDIKPENILLEN----- 181
Query: 139 YPQPQHIKLKIADFGFARFL 158
             +   + +KI DFG + F 
Sbjct: 182 --KNSLLNIKIVDFGLSSFF 199

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 44/145 (30%)
Query: 17  KELTELH----HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           KE+T L     H N+V+L        H +LVME  NGG+L + +  K   SE      ++
Sbjct: 54  KEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMR 113
Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           ++V A+                        H++ V           +VHRDLKP+N+L +
Sbjct: 114 KLVSAV-----------------------SHMHDV----------GVVHRDLKPENLLFT 140
Query: 133 HSFGKQYPQPQHIKLKIADFGFARF 157
                   +  ++++KI DFGFAR 
Sbjct: 141 D-------ENDNLEIKIIDFGFARL 158

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 42/155 (27%)
Query: 1   VATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG 60
           V T S S  +L    +  L +L H N+++L    E  ++ YLVME   GG+L D ++ + 
Sbjct: 59  VTTTSNSGALLDEVAV--LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ 116
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
             SE    + +KQ++          LH  N                            IV
Sbjct: 117 KFSEVDAAVIMKQVLSG-----TTYLHKHN----------------------------IV 143
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           HRDLKP+N+LL         + +   +KI DFG +
Sbjct: 144 HRDLKPENLLLES-------KSRDALIKIVDFGLS 171

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 42/155 (27%)
Query: 1   VATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG 60
           V T S S  +L    +  L +L H N+++L    E  ++ YLVME   GG+L D ++ + 
Sbjct: 42  VTTTSNSGALLDEVAV--LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ 99
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
             SE    + +KQ++          LH  N                            IV
Sbjct: 100 KFSEVDAAVIMKQVLSG-----TTYLHKHN----------------------------IV 126
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           HRDLKP+N+LL         + +   +KI DFG +
Sbjct: 127 HRDLKPENLLLE-------SKSRDALIKIVDFGLS 154

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 41/135 (30%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N+V       +  H+ +VME+ +GG+L + + + G  SED  R F +Q++  +   
Sbjct: 72  LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS-- 129
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C          M+ C         HRDLK +N LL  S     P 
Sbjct: 130 --------------YCH--------AMQVC---------HRDLKLENTLLDGS-----PA 153
Query: 142 PQHIKLKIADFGFAR 156
           P   +LKI  FG+++
Sbjct: 154 P---RLKICAFGYSK 165

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 41/135 (30%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N+V       +  H+ +VME+ +GG+L + + + G  SED  R F +Q++  +   
Sbjct: 72  LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS-- 129
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         +C          M+ C         HRDLK +N LL  S     P 
Sbjct: 130 --------------YCH--------AMQVC---------HRDLKLENTLLDGS-----PA 153
Query: 142 PQHIKLKIADFGFAR 156
           P   +LKI  FG+++
Sbjct: 154 P---RLKICAFGYSK 165

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 55/163 (33%)
Query: 9   IVLTRHILKE------------LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           I+  RHI+KE            ++ L H   V+L    + D+ +Y  + +   G L  Y+
Sbjct: 64  ILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI 123
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
              G+  E   R +  +IV AL              E LH K                  
Sbjct: 124 RKIGSFDETCTRFYTAEIVSAL--------------EYLHGK------------------ 151
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP+NILL+          + + ++I DFG A+ L 
Sbjct: 152 -GIIHRDLKPENILLN----------EDMHIQITDFGTAKVLS 183

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 45/139 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKQIVQA 77
           L ELHH N+V L+    S++ + LV EF    DL   L  +K  L +  I+I+L Q+++ 
Sbjct: 73  LKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           +                 HC    QH              RI+HRDLKPQN+L++     
Sbjct: 132 VA----------------HCH---QH--------------RILHRDLKPQNLLINSDGA- 157
Query: 138 QYPQPQHIKLKIADFGFAR 156
                    LK+ADFG AR
Sbjct: 158 ---------LKLADFGLAR 167

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 63/139 (45%), Gaps = 45/139 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKQIVQA 77
           L ELHH N+V L+    S++ + LV EF    DL   L  +K  L +  I+I+L Q+++ 
Sbjct: 73  LKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           +                 HC    QH              RI+HRDLKPQN+L++     
Sbjct: 132 VA----------------HCH---QH--------------RILHRDLKPQNLLINSDGA- 157
Query: 138 QYPQPQHIKLKIADFGFAR 156
                    LK+ADFG AR
Sbjct: 158 ---------LKLADFGLAR 167

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 43/138 (31%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H  +V+L++  ++   +YL++E+ +GG+L   L  +G   EDT   +L +I  AL
Sbjct: 75  LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH +                             I++RDLKP+NI+L+H     
Sbjct: 135 -----GHLHQKG----------------------------IIYRDLKPENIMLNHQ---- 157
Query: 139 YPQPQHIKLKIADFGFAR 156
                H+KL   DFG  +
Sbjct: 158 ----GHVKL--TDFGLCK 169

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 50.1 bits (118), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 43/138 (31%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H  +V+L++  ++   +YL++E+ +GG+L   L  +G   EDT   +L +I  AL
Sbjct: 75  LEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH +                             I++RDLKP+NI+L+H     
Sbjct: 135 -----GHLHQKG----------------------------IIYRDLKPENIMLNHQ---- 157
Query: 139 YPQPQHIKLKIADFGFAR 156
                H+KL   DFG  +
Sbjct: 158 ----GHVKL--TDFGLCK 169

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 45/152 (29%)
Query: 12  TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-DTI 67
           T  IL+E   L +L H N+++L    E     Y+V E   GG+L D ++ +   SE D  
Sbjct: 65  TSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124
Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
           RI +KQ+        +  +H  N                            IVHRDLKP+
Sbjct: 125 RI-IKQVFSG-----ITYMHKHN----------------------------IVHRDLKPE 150
Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           NILL         + +   +KI DFG +   Q
Sbjct: 151 NILLES-------KEKDCDIKIIDFGLSTCFQ 175

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 63/152 (41%), Gaps = 45/152 (29%)
Query: 12  TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-DTI 67
           T  IL+E   L +L H N+++L    E     Y+V E   GG+L D ++ +   SE D  
Sbjct: 65  TSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124
Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
           RI +KQ+        +  +H  N                            IVHRDLKP+
Sbjct: 125 RI-IKQVFSG-----ITYMHKHN----------------------------IVHRDLKPE 150
Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           NILL         + +   +KI DFG +   Q
Sbjct: 151 NILLES-------KEKDCDIKIIDFGLSTCFQ 175

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 60/151 (39%), Gaps = 43/151 (28%)
Query: 12  TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIR 68
           T  IL+E   L +L H N+++L    E     Y+V E   GG+L D ++ +   SE    
Sbjct: 65  TSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA 124
Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             +KQ+        +  +H  N                            IVHRDLKP+N
Sbjct: 125 RIIKQVFSG-----ITYMHKHN----------------------------IVHRDLKPEN 151
Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           ILL         + +   +KI DFG +   Q
Sbjct: 152 ILLE-------SKEKDCDIKIIDFGLSTCFQ 175

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GGD+  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +K+ADFGFA+
Sbjct: 174 ID----------QQGYIKVADFGFAK 189

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 56/137 (40%), Gaps = 39/137 (28%)
Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
            H N++ L    +  +HVYLV E   GG+L D ++ +   SE      L  I +      
Sbjct: 79  QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK------ 132
Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQP 142
                    VE LH +                    +VHRDLKP NIL     G     P
Sbjct: 133 --------TVEYLHSQG-------------------VVHRDLKPSNILYVDESG----NP 161
Query: 143 QHIKLKIADFGFARFLQ 159
           +   L+I DFGFA+ L+
Sbjct: 162 EC--LRICDFGFAKQLR 176

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 56/137 (40%), Gaps = 39/137 (28%)
Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
            H N++ L    +  +HVYLV E   GG+L D ++ +   SE      L  I +      
Sbjct: 79  QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK------ 132
Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQP 142
                    VE LH +                    +VHRDLKP NIL     G     P
Sbjct: 133 --------TVEYLHSQ-------------------GVVHRDLKPSNILYVDESG----NP 161
Query: 143 QHIKLKIADFGFARFLQ 159
           +   L+I DFGFA+ L+
Sbjct: 162 EC--LRICDFGFAKQLR 176

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GGD+  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +K+ADFGFA+
Sbjct: 174 ID----------QQGYIKVADFGFAK 189

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL D++ +     +    I+ +L Q++Q
Sbjct: 59  LKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 118 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 144
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 145 ----------IKLADFGLAR 154

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 43/160 (26%)
Query: 1   VATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG 60
           V+T S S ++    +LK L    H N+++L    E  ++ YLVME   GG+L D ++ + 
Sbjct: 75  VSTSSNSKLLEEVAVLKLL---DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM 131
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
             +E    + +KQ++       V  LH  N                            IV
Sbjct: 132 KFNEVDAAVIIKQVLSG-----VTYLHKHN----------------------------IV 158
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           HRDLKP+N+LL         + +   +KI DFG +   ++
Sbjct: 159 HRDLKPENLLLE-------SKEKDALIKIVDFGLSAVFEN 191

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL D++ +     +    I+ +L Q++Q
Sbjct: 58  LKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 117 GLA------------------------------FCHS---HRVLHRDLKPQNLLINTEGA 143
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 144 ----------IKLADFGLAR 153

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 56/138 (40%), Gaps = 44/138 (31%)
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQ-----VKELHHENVVELLHCKESDQHVYLVMEFC 111
           V KGT      +   K  V+ +  F+     +K L H N++ L    E +  +YLVME C
Sbjct: 46  VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 105
Query: 112 NGGDL---------------ARIV----------------HRDLKPQNILLSHSFGKQYP 140
            GG+L               ARI+                HRDLKP+N L    F    P
Sbjct: 106 TGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFL----FLTDSP 161
Query: 141 QPQHIKLKIADFGF-ARF 157
                 LK+ DFG  ARF
Sbjct: 162 DS---PLKLIDFGLAARF 176

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 56/138 (40%), Gaps = 44/138 (31%)
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQ-----VKELHHENVVELLHCKESDQHVYLVMEFC 111
           V KGT      +   K  V+ +  F+     +K L H N++ L    E +  +YLVME C
Sbjct: 29  VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88
Query: 112 NGGDL---------------ARIV----------------HRDLKPQNILLSHSFGKQYP 140
            GG+L               ARI+                HRDLKP+N L    F    P
Sbjct: 89  TGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFL----FLTDSP 144
Query: 141 QPQHIKLKIADFGF-ARF 157
                 LK+ DFG  ARF
Sbjct: 145 D---SPLKLIDFGLAARF 159

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 41/142 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L+H  ++++ +  +++ + Y+V+E   GG+L D +V    L E T +++  Q++ A+
Sbjct: 69  LKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           +        HEN                            I+HRDLKP+N+LLS      
Sbjct: 128 QYL------HEN---------------------------GIIHRDLKPENVLLSS----- 149
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             Q +   +KI DFG ++ L +
Sbjct: 150 --QEEDCLIKITDFGHSKILGE 169

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 41/142 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L+H  ++++ +  +++ + Y+V+E   GG+L D +V    L E T +++  Q++ A+
Sbjct: 69  LKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           +        HEN                            I+HRDLKP+N+LLS      
Sbjct: 128 QYL------HEN---------------------------GIIHRDLKPENVLLSS----- 149
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             Q +   +KI DFG ++ L +
Sbjct: 150 --QEEDCLIKITDFGHSKILGE 169

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 41/142 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L+H  ++++ +  +++ + Y+V+E   GG+L D +V    L E T +++  Q++ A+
Sbjct: 68  LKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 126
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           +        HEN                            I+HRDLKP+N+LLS      
Sbjct: 127 QYL------HEN---------------------------GIIHRDLKPENVLLSS----- 148
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             Q +   +KI DFG ++ L +
Sbjct: 149 --QEEDCLIKITDFGHSKILGE 168

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 41/142 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L+H  ++++ +  +++ + Y+V+E   GG+L D +V    L E T +++  Q++ A+
Sbjct: 69  LKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 127
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           +        HEN                            I+HRDLKP+N+LLS      
Sbjct: 128 QYL------HEN---------------------------GIIHRDLKPENVLLSS----- 149
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             Q +   +KI DFG ++ L +
Sbjct: 150 --QEEDCLIKITDFGHSKILGE 169

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 41/142 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L+H  ++++ +  +++ + Y+V+E   GG+L D +V    L E T +++  Q++ A+
Sbjct: 75  LKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 133
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           +        HEN                            I+HRDLKP+N+LLS      
Sbjct: 134 QYL------HEN---------------------------GIIHRDLKPENVLLSS----- 155
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             Q +   +KI DFG ++ L +
Sbjct: 156 --QEEDCLIKITDFGHSKILGE 175

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 42/138 (30%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-DTIRIFLKQIVQA 77
           L +L H N+++L    E   + YLV E   GG+L D ++S+   SE D  RI ++Q++  
Sbjct: 86  LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSG 144
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           +         H+N                           +IVHRDLKP+N+LL      
Sbjct: 145 ITYM------HKN---------------------------KIVHRDLKPENLLLES---- 167
Query: 138 QYPQPQHIKLKIADFGFA 155
              + +   ++I DFG +
Sbjct: 168 ---KSKDANIRIIDFGLS 182

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 42/138 (30%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-DTIRIFLKQIVQA 77
           L +L H N+++L    E   + YLV E   GG+L D ++S+   SE D  RI ++Q++  
Sbjct: 80  LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSG 138
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           +         H+N                           +IVHRDLKP+N+LL      
Sbjct: 139 ITYM------HKN---------------------------KIVHRDLKPENLLLE----- 160
Query: 138 QYPQPQHIKLKIADFGFA 155
              + +   ++I DFG +
Sbjct: 161 --SKSKDANIRIIDFGLS 176

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 61/143 (42%), Gaps = 43/143 (30%)
Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           +K L +L HEN+V LL   +  +  YLV EF +   L D  +    L    ++ +L QI+
Sbjct: 75  IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQII 134
Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
             +                               FC+  +   I+HRD+KP+NIL+S S 
Sbjct: 135 NGIG------------------------------FCHSHN---IIHRDIKPENILVSQSG 161
Query: 136 GKQYPQPQHIKLKIADFGFARFL 158
                      +K+ DFGFAR L
Sbjct: 162 ----------VVKLCDFGFARTL 174

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 41/140 (29%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L+H  ++++ +  +++ + Y+V+E   GG+L D +V    L E T +++  Q++ A+
Sbjct: 208 LKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 266
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           +        HEN                            I+HRDLKP+N+LLS      
Sbjct: 267 QYL------HEN---------------------------GIIHRDLKPENVLLSS----- 288
Query: 139 YPQPQHIKLKIADFGFARFL 158
             Q +   +KI DFG ++ L
Sbjct: 289 --QEEDCLIKITDFGHSKIL 306

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 42/138 (30%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-DTIRIFLKQIVQA 77
           L +L H N+++L    E   + YLV E   GG+L D ++S+   SE D  RI ++Q++  
Sbjct: 104 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSG 162
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           +         H+N                           +IVHRDLKP+N+LL      
Sbjct: 163 ITYM------HKN---------------------------KIVHRDLKPENLLLE----- 184
Query: 138 QYPQPQHIKLKIADFGFA 155
              + +   ++I DFG +
Sbjct: 185 --SKSKDANIRIIDFGLS 200

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 42/138 (30%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-DTIRIFLKQIVQA 77
           L +L H N+++L    E   + YLV E   GG+L D ++S+   SE D  RI ++Q++  
Sbjct: 103 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSG 161
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           +         H+N                           +IVHRDLKP+N+LL      
Sbjct: 162 ITYM------HKN---------------------------KIVHRDLKPENLLLES---- 184
Query: 138 QYPQPQHIKLKIADFGFA 155
              + +   ++I DFG +
Sbjct: 185 ---KSKDANIRIIDFGLS 199

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 41/140 (29%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L+H  ++++ +  +++ + Y+V+E   GG+L D +V    L E T +++  Q++ A+
Sbjct: 194 LKKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 252
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           +        HEN                            I+HRDLKP+N+LLS      
Sbjct: 253 QYL------HEN---------------------------GIIHRDLKPENVLLSS----- 274
Query: 139 YPQPQHIKLKIADFGFARFL 158
             Q +   +KI DFG ++ L
Sbjct: 275 --QEEDCLIKITDFGHSKIL 292

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 39/137 (28%)
Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
            H N++ L    +  ++VY+V E   GG+L D ++ +   SE      L  I +      
Sbjct: 74  QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITK------ 127
Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQP 142
                    VE LH +                    +VHRDLKP NIL     G     P
Sbjct: 128 --------TVEYLHAQG-------------------VVHRDLKPSNILYVDESG----NP 156
Query: 143 QHIKLKIADFGFARFLQ 159
           + I  +I DFGFA+ L+
Sbjct: 157 ESI--RICDFGFAKQLR 171

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 44/127 (34%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           VV+L +  + D+++Y+VME+  GGDL + L+S   + E   R +  ++V AL A      
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDA------ 188
Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                   +H           M F         +HRD+KP N+LL  S         H  
Sbjct: 189 --------IHS----------MGF---------IHRDVKPDNMLLDKS--------GH-- 211
Query: 147 LKIADFG 153
           LK+ADFG
Sbjct: 212 LKLADFG 218

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 44/127 (34%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           VV+L +  + D+++Y+VME+  GGDL + L+S   + E   R +  ++V AL A      
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDA------ 183
Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                   +H           M F         +HRD+KP N+LL  S         H  
Sbjct: 184 --------IHS----------MGF---------IHRDVKPDNMLLDKS--------GH-- 206
Query: 147 LKIADFG 153
           LK+ADFG
Sbjct: 207 LKLADFG 213

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 45/151 (29%)
Query: 12  TRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTL-SEDTIRI 69
           +R  +  L  + H N+V+     E +  +Y+VM++C GGDL   +   KG L  ED I  
Sbjct: 70  SRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILD 129
Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           +  QI  ALK                       HV+            +I+HRD+K QNI
Sbjct: 130 WFVQICLALK-----------------------HVH----------DRKILHRDIKSQNI 156
Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            L+          +   +++ DFG AR L  
Sbjct: 157 FLT----------KDGTVQLGDFGIARVLNS 177

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 44/127 (34%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           VV+L +  + D+++Y+VME+  GGDL + L+S   + E   R +  ++V AL A      
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPEKWARFYTAEVVLALDA------ 188
Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                   +H           M F         +HRD+KP N+LL  S         H  
Sbjct: 189 --------IHS----------MGF---------IHRDVKPDNMLLDKS--------GH-- 211
Query: 147 LKIADFG 153
           LK+ADFG
Sbjct: 212 LKLADFG 218

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 39/137 (28%)
Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
            H N++ L    +  ++VY+V E   GG+L D ++ +   SE      L  I +      
Sbjct: 74  QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITK------ 127
Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQP 142
                    VE LH +                    +VHRDLKP NIL     G     P
Sbjct: 128 --------TVEYLHAQG-------------------VVHRDLKPSNILYVDESG----NP 156
Query: 143 QHIKLKIADFGFARFLQ 159
           + I  +I DFGFA+ L+
Sbjct: 157 ESI--RICDFGFAKQLR 171

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 42/138 (30%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-DTIRIFLKQIVQA 77
           L +L H N+ +L    E   + YLV E   GG+L D ++S+   SE D  RI ++Q++  
Sbjct: 80  LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSG 138
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           +         H+N                           +IVHRDLKP+N+LL      
Sbjct: 139 IT------YXHKN---------------------------KIVHRDLKPENLLLE----- 160
Query: 138 QYPQPQHIKLKIADFGFA 155
              + +   ++I DFG +
Sbjct: 161 --SKSKDANIRIIDFGLS 176

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +K+ADFGFA+
Sbjct: 174 ID----------QQGYIKVADFGFAK 189

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 56/164 (34%)
Query: 10  VLTRHILKELTELHHEN-------------VVELLHCKESDQHVYLVMEFCNGGDLADYL 56
           VL + I+  L ++ H N             ++ +    +  Q ++++M++  GG+L   L
Sbjct: 38  VLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLL 97
Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
                      + +  ++  AL              E LH K+                 
Sbjct: 98  RKSQRFPNPVAKFYAAEVCLAL--------------EYLHSKD----------------- 126
Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
             I++RDLKP+NILL  +         HI  KI DFGFA+++ D
Sbjct: 127 --IIYRDLKPENILLDKN--------GHI--KITDFGFAKYVPD 158

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL D++ +     +    I+ +L Q++Q
Sbjct: 56  LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKDFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKP+N+L++    
Sbjct: 115 GLA------------------------------FCHS---HRVLHRDLKPENLLINTEGA 141
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 142 ----------IKLADFGLAR 151

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 44/140 (31%)
Query: 21  ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALK 79
           +L H +++EL +  E   +VYLV+E C+ G++  YL ++    SE+  R F+ QI+  + 
Sbjct: 67  QLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGM- 125
Query: 80  AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
                                   +YL     +G     I+HRDL   N+LL+       
Sbjct: 126 ------------------------LYL---HSHG-----ILHRDLTLSNLLLT------- 146
Query: 140 PQPQHIKLKIADFGFARFLQ 159
              +++ +KIADFG A  L+
Sbjct: 147 ---RNMNIKIADFGLATQLK 163

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 43/130 (33%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           +V+L    + + ++Y+V+E+  GG++  +L   G  SE   R +  QIV           
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----------- 152
Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                              L  E+ +  DL   ++RDLKP+N+L+           Q   
Sbjct: 153 -------------------LTFEYLHSLDL---IYRDLKPENLLID----------QQGY 180
Query: 147 LKIADFGFAR 156
           +K+ADFGFA+
Sbjct: 181 IKVADFGFAK 190

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 40/134 (29%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N+V L      + H YL+ +   GG+L + +V++   SE      ++QI++A    
Sbjct: 78  LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA---- 133
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                       +LHC +                   +VHRDLKP+N+LL+         
Sbjct: 134 ------------VLHCHQMG-----------------VVHRDLKPENLLLASKL------ 158
Query: 142 PQHIKLKIADFGFA 155
            +   +K+ADFG A
Sbjct: 159 -KGAAVKLADFGLA 171

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 63/144 (43%), Gaps = 50/144 (34%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT------LSEDTIRIFLK 72
           + EL HEN+V L     ++  + LV EF +  DL  Y+ S+        L  + ++ F  
Sbjct: 57  MKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQW 115
Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           Q++Q L AF      HEN                           +I+HRDLKPQN+L++
Sbjct: 116 QLLQGL-AF-----CHEN---------------------------KILHRDLKPQNLLIN 142
Query: 133 HSFGKQYPQPQHIKLKIADFGFAR 156
                     +  +LK+ DFG AR
Sbjct: 143 ----------KRGQLKLGDFGLAR 156

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 43/138 (31%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E++H  +V+L +  +++  +YL+++F  GGDL   L  +   +E+ ++ +L ++  AL
Sbjct: 80  LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                         + LH                      I++RDLKP+NILL       
Sbjct: 140 --------------DHLHS-------------------LGIIYRDLKPENILLD------ 160
Query: 139 YPQPQHIKLKIADFGFAR 156
             +  HIKL   DFG ++
Sbjct: 161 --EEGHIKL--TDFGLSK 174

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 43/138 (31%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E++H  +V+L +  +++  +YL+++F  GGDL   L  +   +E+ ++ +L ++  AL
Sbjct: 81  LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 140
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                         + LH                      I++RDLKP+NILL       
Sbjct: 141 --------------DHLHS-------------------LGIIYRDLKPENILLD------ 161
Query: 139 YPQPQHIKLKIADFGFAR 156
             +  HIKL   DFG ++
Sbjct: 162 --EEGHIKL--TDFGLSK 175

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 43/138 (31%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E++H  +V+L +  +++  +YL+++F  GGDL   L  +   +E+ ++ +L ++  AL
Sbjct: 80  LVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALAL 139
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                         + LH                      I++RDLKP+NILL       
Sbjct: 140 --------------DHLHS-------------------LGIIYRDLKPENILLD------ 160
Query: 139 YPQPQHIKLKIADFGFAR 156
             +  HIKL   DFG ++
Sbjct: 161 --EEGHIKL--TDFGLSK 174

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 56  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 115 GL------------------------------SFCHS---HRVLHRDLKPQNLLINTEGA 141
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 142 ----------IKLADFGLAR 151

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 56  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 115 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 141
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 142 ----------IKLADFGLAR 151

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 56  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 115 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 141
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 142 ----------IKLADFGLAR 151

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 63  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 122 GLA------------------------------FCHS---HRVLHRDLKPQNLLINTEGA 148
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 149 ----------IKLADFGLAR 158

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 46/149 (30%)
Query: 13  RHILKELT---ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           R++ KEL     L H  +V L +  + ++ +++V++   GGDL  +L       E+T+++
Sbjct: 60  RNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKL 119
Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           F+ ++V AL   Q +                                 RI+HRD+KP NI
Sbjct: 120 FICELVMALDYLQNQ---------------------------------RIIHRDMKPDNI 146
Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           LL           +H  + I DF  A  L
Sbjct: 147 LLD----------EHGHVHITDFNIAAML 165

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 56  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 115 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 141
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 142 ----------IKLADFGLAR 151

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 55  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 114 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 140
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 141 ----------IKLADFGLAR 150

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 56  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 115 GLA------------------------------FCHS---HRVLHRDLKPQNLLINTEGA 141
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 142 ----------IKLADFGLAR 151

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 56  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 115 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 141
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 142 ----------IKLADFGLAR 151

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 55  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 114 GLA------------------------------FCHS---HRVLHRDLKPQNLLINTEGA 140
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 141 ----------IKLADFGLAR 150

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 59  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 118 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 144
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 145 ----------IKLADFGLAR 154

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 55  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 114 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 140
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 141 ----------IKLADFGLAR 150

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 56  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 115 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 141
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 142 ----------IKLADFGLAR 151

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 60  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 119 GLA------------------------------FCHS---HRVLHRDLKPQNLLINTEGA 145
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 146 ----------IKLADFGLAR 155

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 57  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 116 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 142
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 143 ----------IKLADFGLAR 152

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 55  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 114 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 140
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 141 ----------IKLADFGLAR 150

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 60  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 119 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 145
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 146 ----------IKLADFGLAR 155

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 58  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 117 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 143
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 144 ----------IKLADFGLAR 153

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 59  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 118 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 144
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 145 ----------IKLADFGLAR 154

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 58  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 117 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 143
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 144 ----------IKLADFGLAR 153

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 55  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 114 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 140
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 141 ----------IKLADFGLAR 150

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 59  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 118 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 144
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 145 ----------IKLADFGLAR 154

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 56  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 115 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 141
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 142 ----------IKLADFGLAR 151

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 57  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 116 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 142
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 143 ----------IKLADFGLAR 152

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 57  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 116 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 142
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 143 ----------IKLADFGLAR 152

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 56  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 115 GLA------------------------------FCHS---HRVLHRDLKPQNLLINTEGA 141
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 142 ----------IKLADFGLAR 151

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 63  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 122 GLA------------------------------FCHS---HRVLHRDLKPQNLLINTEGA 148
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 149 ----------IKLADFGLAR 158

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L +  + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 43/130 (33%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +  QIV           
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----------- 151
Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                              L  E+ +  DL   ++RDLKP+N+++           Q   
Sbjct: 152 -------------------LTFEYLHSLDL---IYRDLKPENLMID----------QQGY 179
Query: 147 LKIADFGFAR 156
           +K+ DFGFA+
Sbjct: 180 IKVTDFGFAK 189

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L +  + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 43/130 (33%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +  QIV           
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----------- 152
Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                              L  E+ +  DL   ++RDLKP+N+++           Q   
Sbjct: 153 -------------------LTFEYLHSLDL---IYRDLKPENLMID----------QQGY 180
Query: 147 LKIADFGFAR 156
           +K+ DFGFA+
Sbjct: 181 IKVTDFGFAK 190

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L +  + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 44/136 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +  HENVVE+ +       +++VMEF  GG L D +V+   ++E+ I      ++QAL
Sbjct: 125 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQAL 183
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH + V                            +HRD+K  +ILL+H     
Sbjct: 184 SV-----LHAQGV----------------------------IHRDIKSDSILLTHDG--- 207
Query: 139 YPQPQHIKLKIADFGF 154
                  ++K++DFGF
Sbjct: 208 -------RVKLSDFGF 216

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 44/136 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +  HENVVE+ +       +++VMEF  GG L D +V+   ++E+ I      ++QAL
Sbjct: 80  MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQAL 138
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH + V                            +HRD+K  +ILL+H     
Sbjct: 139 SV-----LHAQGV----------------------------IHRDIKSDSILLTHDG--- 162
Query: 139 YPQPQHIKLKIADFGF 154
                  ++K++DFGF
Sbjct: 163 -------RVKLSDFGF 171

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 44/136 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +  HENVVE+ +       +++VMEF  GG L D +V+   ++E+ I      ++QAL
Sbjct: 82  MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQAL 140
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH + V                            +HRD+K  +ILL+H     
Sbjct: 141 SV-----LHAQGV----------------------------IHRDIKSDSILLTHDG--- 164
Query: 139 YPQPQHIKLKIADFGF 154
                  ++K++DFGF
Sbjct: 165 -------RVKLSDFGF 173

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 44/136 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +  HENVVE+ +       +++VMEF  GG L D +V+   ++E+ I      ++QAL
Sbjct: 75  MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQAL 133
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH + V                            +HRD+K  +ILL+H     
Sbjct: 134 SV-----LHAQGV----------------------------IHRDIKSDSILLTHDG--- 157
Query: 139 YPQPQHIKLKIADFGF 154
                  ++K++DFGF
Sbjct: 158 -------RVKLSDFGF 166

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 44/136 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +  HENVVE+ +       +++VMEF  GG L D +V+   ++E+ I      ++QAL
Sbjct: 71  MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQAL 129
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH + V                            +HRD+K  +ILL+H     
Sbjct: 130 SV-----LHAQGV----------------------------IHRDIKSDSILLTHDG--- 153
Query: 139 YPQPQHIKLKIADFGF 154
                  ++K++DFGF
Sbjct: 154 -------RVKLSDFGF 162

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 44/136 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +  HENVVE+ +       +++VMEF  GG L D +V+   ++E+ I      ++QAL
Sbjct: 202 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQAL 260
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH + V                            +HRD+K  +ILL+H     
Sbjct: 261 SV-----LHAQGV----------------------------IHRDIKSDSILLTHDG--- 284
Query: 139 YPQPQHIKLKIADFGF 154
                  ++K++DFGF
Sbjct: 285 -------RVKLSDFGF 293

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 43/136 (31%)
Query: 20  TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALK 79
           + L H N++ + +     + +YL++EF   G+L   L   G   E     F++++  AL 
Sbjct: 70  SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALH 129
Query: 80  AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
                           +C E                  +++HRD+KP+N+L+ +      
Sbjct: 130 ----------------YCHER-----------------KVIHRDIKPENLLMGYKG---- 152
Query: 140 PQPQHIKLKIADFGFA 155
                 +LKIADFG++
Sbjct: 153 ------ELKIADFGWS 162

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 44/127 (34%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           VV+L    + D+++Y+VME+  GGDL + L+S   + E   + +  ++V AL A     L
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEVVLALDAIHSMGL 195
Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                                            +HRD+KP N+LL           +H  
Sbjct: 196 ---------------------------------IHRDVKPDNMLLD----------KHGH 212
Query: 147 LKIADFG 153
           LK+ADFG
Sbjct: 213 LKLADFG 219

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 57/136 (41%), Gaps = 43/136 (31%)
Query: 20  TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALK 79
           + L H N++ + +     + +YL++EF   G+L   L   G   E     F++++  AL 
Sbjct: 69  SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALH 128
Query: 80  AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
                           +C E                  +++HRD+KP+N+L+ +      
Sbjct: 129 ----------------YCHER-----------------KVIHRDIKPENLLMGYKG---- 151
Query: 140 PQPQHIKLKIADFGFA 155
                 +LKIADFG++
Sbjct: 152 ------ELKIADFGWS 161

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 50/174 (28%)
Query: 31  LHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI-------FLKQIVQALKAFQV 83
           +  + +  H++L+ +    G  A+    +   + D   I       FL+ +   ++ F+V
Sbjct: 1   MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV 60
Query: 84  -KELHHENVVELLHCKE--SDQHVYLVMEFCNGGDLAR---------------------- 118
            K+L+H+N+V+L   +E  + +H  L+MEFC  G L                        
Sbjct: 61  LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120
Query: 119 ------------IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
                       IVHR++KP NI+      +   +      K+ DFG AR L+D
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIM------RVIGEDGQSVYKLTDFGAARELED 168

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 50/174 (28%)
Query: 31  LHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI-------FLKQIVQALKAFQV 83
           +  + +  H++L+ +    G  A+    +   + D   I       FL+ +   ++ F+V
Sbjct: 1   MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEV 60
Query: 84  -KELHHENVVELLHCKE--SDQHVYLVMEFCNGGDLAR---------------------- 118
            K+L+H+N+V+L   +E  + +H  L+MEFC  G L                        
Sbjct: 61  LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRD 120
Query: 119 ------------IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
                       IVHR++KP NI+      +   +      K+ DFG AR L+D
Sbjct: 121 VVGGMNHLRENGIVHRNIKPGNIM------RVIGEDGQSVYKLTDFGAARELED 168

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 57  LKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKP+N+L++    
Sbjct: 116 GLA------------------------------FCHS---HRVLHRDLKPENLLINTEGA 142
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 143 ----------IKLADFGLAR 152

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 59  LKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKP+N+L++    
Sbjct: 118 GLA------------------------------FCHS---HRVLHRDLKPENLLINTEGA 144
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 145 ----------IKLADFGLAR 154

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 33/154 (21%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-----SKGTLSEDTIRIFL-- 71
           + +LHH N+  L    E +Q++ LVME C+GG L D L      S G  + D ++  +  
Sbjct: 82  MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 72  ------KQIVQALKAFQ--VKELHHENVVELLHCKESDQHVYLVMEFC-NGGDLARIVHR 122
                 + I  ++  F+  +  +  E ++  +      + ++  + +  N G    I HR
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIM-----RQIFSALHYLHNQG----ICHR 192
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           D+KP+N L S +        +  ++K+ DFG ++
Sbjct: 193 DIKPENFLFSTN--------KSFEIKLVDFGLSK 218

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 40/134 (29%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N+V L      + H YL+ +   GG+L + +V++   SE      ++QI++A    
Sbjct: 67  LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA---- 122
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                       +LHC +                   +VHR+LKP+N+LL+         
Sbjct: 123 ------------VLHCHQMG-----------------VVHRNLKPENLLLASKL------ 147
Query: 142 PQHIKLKIADFGFA 155
            +   +K+ADFG A
Sbjct: 148 -KGAAVKLADFGLA 160

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 46/139 (33%)
Query: 19  LTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQ 76
           L +L H NVV+L+      ++ H+Y+V E  N G + +    K  LSED  R + + +++
Sbjct: 90  LKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK-PLSEDQARFYFQDLIK 148
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
                          +E LH +                   +I+HRD+KP N+L+     
Sbjct: 149 G--------------IEYLHYQ-------------------KIIHRDIKPSNLLVGED-- 173
Query: 137 KQYPQPQHIKLKIADFGFA 155
                  HI  KIADFG +
Sbjct: 174 ------GHI--KIADFGVS 184

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 43/122 (35%)
Query: 35  ESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVEL 94
           + + ++Y+VME+  GG++  +L   G  SE   R +  QIV                   
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV------------------- 152
Query: 95  LHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGF 154
                      L  E+ +  DL   ++RDLKP+N+++           Q   +K+ DFGF
Sbjct: 153 -----------LTFEYLHSLDL---IYRDLKPENLMID----------QQGYIKVTDFGF 188
Query: 155 AR 156
           A+
Sbjct: 189 AK 190

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 43/122 (35%)
Query: 35  ESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVEL 94
           + + ++Y+VME+  GG++  +L   G  SE   R +  QIV                   
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV------------------- 152
Query: 95  LHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGF 154
                      L  E+ +  DL   ++RDLKP+N+++           Q   +K+ DFGF
Sbjct: 153 -----------LTFEYLHSLDL---IYRDLKPENLMID----------QQGYIKVTDFGF 188
Query: 155 AR 156
           A+
Sbjct: 189 AK 190

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 43  KRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 103 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 129
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 130 DIKPENLLLD----------ERDNLKISDFGLA 152

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 47/162 (29%)
Query: 1   VATQSKSSIVLTRHILKELTELH---HENVVELLHCKESDQHVYLVMEFCNGGDLADYLV 57
           VA  + S  + T  + +E +  H   H ++VELL    SD  +Y+V EF +G DL   +V
Sbjct: 61  VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIV 120
Query: 58  SKG----TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNG 113
            +       SE     +++QI++AL+                +C +++            
Sbjct: 121 KRADAGFVYSEAVASHYMRQILEALR----------------YCHDNN------------ 152
Query: 114 GDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
                I+HRD+KP  +LL+    K+   P    +K+  FG A
Sbjct: 153 -----IIHRDVKPHCVLLAS---KENSAP----VKLGGFGVA 182

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 43  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 103 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 129
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 130 DIKPENLLLD----------ERDNLKISDFGLA 152

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 41/105 (39%)
Query: 83  VKELHHENVVEL---LHCKES--------DQHVYLVMEFCNGG---------------DL 116
           +KEL H N+V+L   +H K+         DQ +  +++ C GG                +
Sbjct: 54  LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 117 A-----RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           A     R++HRDLKPQN+L++          +  +LKIADFG AR
Sbjct: 114 AYCHDRRVLHRDLKPQNLLIN----------REGELKIADFGLAR 148

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 47/162 (29%)
Query: 1   VATQSKSSIVLTRHILKELTELH---HENVVELLHCKESDQHVYLVMEFCNGGDLADYLV 57
           VA  + S  + T  + +E +  H   H ++VELL    SD  +Y+V EF +G DL   +V
Sbjct: 59  VAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIV 118
Query: 58  SKG----TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNG 113
            +       SE     +++QI++AL+                +C +++            
Sbjct: 119 KRADAGFVYSEAVASHYMRQILEALR----------------YCHDNN------------ 150
Query: 114 GDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
                I+HRD+KP  +LL+    K+   P    +K+  FG A
Sbjct: 151 -----IIHRDVKPHCVLLA---SKENSAP----VKLGGFGVA 180

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 42  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 102 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 128
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 129 DIKPENLLLD----------ERDNLKISDFGLA 151

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 41/105 (39%)
Query: 83  VKELHHENVVEL---LHCKES--------DQHVYLVMEFCNGG---------------DL 116
           +KEL H N+V+L   +H K+         DQ +  +++ C GG                +
Sbjct: 54  LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 117 A-----RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           A     R++HRDLKPQN+L++          +  +LKIADFG AR
Sbjct: 114 AYCHDRRVLHRDLKPQNLLIN----------REGELKIADFGLAR 148

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 41/105 (39%)
Query: 83  VKELHHENVVEL---LHCKES--------DQHVYLVMEFCNGG---------------DL 116
           +KEL H N+V+L   +H K+         DQ +  +++ C GG                +
Sbjct: 54  LKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGI 113
Query: 117 A-----RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           A     R++HRDLKPQN+L++          +  +LKIADFG AR
Sbjct: 114 AYCHDRRVLHRDLKPQNLLIN----------REGELKIADFGLAR 148

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 33/149 (22%)
Query: 13  RHILKELTEL----HHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTI 67
           R ++ EL  L    HH NVV LL  C +    + +++EFC  G+L+ YL SK        
Sbjct: 76  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-------- 127
Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
                        ++  E  +++ + L H       V   MEF       + +HRDL  +
Sbjct: 128 -------RNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAAR 177
Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           NILLS          +   +KI DFG AR
Sbjct: 178 NILLS----------EKNVVKICDFGLAR 196

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 57  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKP+N+L++    
Sbjct: 116 GLA------------------------------FCHS---HRVLHRDLKPENLLINTEGA 142
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 143 ----------IKLADFGLAR 152

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 88  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 147
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 148 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 174
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 175 ID----------QQGYIQVTDFGFAK 190

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 88  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 147
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 148 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 174
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 175 ID----------QQGYIQVTDFGFAK 190

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 58  LKELNHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKP+N+L++    
Sbjct: 117 GLA------------------------------FCHS---HRVLHRDLKPENLLINTEGA 143
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 144 ----------IKLADFGLAR 153

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 88  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 147
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 148 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 174
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 175 ID----------QQGYIQVTDFGFAK 190

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 80  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 139
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 140 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 166
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 167 ID----------QQGYIQVTDFGFAK 182

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 43/138 (31%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +++H  VV+L +  +++  +YL+++F  GGDL   L  +   +E+ ++ +L ++    
Sbjct: 84  LADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL---- 139
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
            A  +  LH                               I++RDLKP+NILL       
Sbjct: 140 -ALGLDHLHSLG----------------------------IIYRDLKPENILLD------ 164
Query: 139 YPQPQHIKLKIADFGFAR 156
             +  HIKL   DFG ++
Sbjct: 165 --EEGHIKL--TDFGLSK 178

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 43  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 103 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 129
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 130 DIKPENLLLD----------ERDNLKISDFGLA 152

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 43  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 103 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 129
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 130 DIKPENLLLD----------ERDNLKISDFGLA 152

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 43  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 103 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 129
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 130 DIKPENLLLD----------ERDNLKISDFGLA 152

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 88  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 147
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 148 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 174
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 175 ID----------QQGYIQVTDFGFAK 190

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 42  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 102 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 128
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 129 DIKPENLLLD----------ERDNLKISDFGLA 151

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 88  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 147
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 148 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 174
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 175 ID----------QQGYIQVTDFGFAK 190

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKELT---ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 42  KRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 102 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 128
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 129 DIKPENLLLD----------ERDNLKISDFGLA 151

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 108 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 167
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 168 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 194
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 195 ID----------QQGYIQVTDFGFAK 210

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 43/130 (33%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +  QIV           
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIV----------- 152
Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                              L  E+ +  DL   ++RDLKP+N+L+           Q   
Sbjct: 153 -------------------LTFEYLHSLDL---IYRDLKPENLLID----------QQGY 180
Query: 147 LKIADFGFAR 156
           +++ DFGFA+
Sbjct: 181 IQVTDFGFAK 190

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 42  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 102 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 128
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 129 DIKPENLLLD----------ERDNLKISDFGLA 151

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 41  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 100
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 101 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 127
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 128 DIKPENLLLD----------ERDNLKISDFGLA 150

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKELT---ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 43  KRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 103 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 129
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 130 DIKPENLLLD----------ERDNLKISDFGLA 152

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 43  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 103 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 129
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 130 DIKPENLLLD----------ERDNLKISDFGLA 152

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 42  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 102 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 128
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 129 DIKPENLLLD----------ERDNLKISDFGLA 151

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 73  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFY 132
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 133 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 159
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 160 ID----------QQGYIQVTDFGFAK 175

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 42  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 102 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 128
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 129 DIKPENLLLD----------ERDNLKISDFGLA 151

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 42  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 102 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 128
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 129 DIKPENLLLD----------ERDNLKISDFGLA 151

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKELT---ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 42  KRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 102 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 128
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 129 DIKPENLLLD----------ERDNLKISDFGLA 151

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+HENVV+    +      YL +E+C+GG+L D +     + E   + F  Q++  +   
Sbjct: 61  LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGV--- 117
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                                 VYL     +G     I HRD+KP+N+LL          
Sbjct: 118 ----------------------VYL-----HG---IGITHRDIKPENLLLD--------- 138
Query: 142 PQHIKLKIADFGFA 155
            +   LKI+DFG A
Sbjct: 139 -ERDNLKISDFGLA 151

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 108 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 167
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 168 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 194
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 195 ID----------QQGYIQVTDFGFAK 210

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 42  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 102 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 128
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 129 DIKPENLLLD----------ERDNLKISDFGLA 151

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 42  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 102 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 128
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 129 DIKPENLLLD----------ERDNLKISDFGLA 151

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N++
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLM 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 43  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 102
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 103 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 129
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 130 DIKPENLLLD----------ERDNLKISDFGLA 152

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 64/153 (41%), Gaps = 46/153 (30%)
Query: 6   KSSIVLTRHILKEL---TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE+     L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 42  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 101
Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +                         VYL     +G     I HR
Sbjct: 102 PEPDAQRFFHQLMAGV-------------------------VYL-----HG---IGITHR 128
Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           D+KP+N+LL           +   LKI+DFG A
Sbjct: 129 DIKPENLLLD----------ERDNLKISDFGLA 151

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 34/149 (22%)
Query: 13  RHILKELTEL----HHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTI 67
           R ++ EL  L    HH NVV LL  C +    + +++EFC  G+L+ YL SK        
Sbjct: 77  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK-------- 128
Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
                        ++ ++L +++ + L H       V   MEF       + +HRDL  +
Sbjct: 129 -------RNEFVPYKPEDL-YKDFLTLEHLIXYSFQVAKGMEFLAS---RKXIHRDLAAR 177
Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           NILLS          +   +KI DFG AR
Sbjct: 178 NILLS----------EKNVVKICDFGLAR 196

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 43/130 (33%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           +V+L    + + ++Y+VME+  GG++  +L   G   E   R +  QIV           
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV----------- 151
Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                              L  E+ +  DL   ++RDLKP+N+++           Q   
Sbjct: 152 -------------------LTFEYLHSLDL---IYRDLKPENLMID----------QQGY 179
Query: 147 LKIADFGFAR 156
           +K+ DFGFA+
Sbjct: 180 IKVTDFGFAK 189

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N++
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLI 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 45/140 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTL--SEDTIRIFLKQIVQAL 78
           L H+N+V+ L     +  + + ME   GG L+  L SK G L  +E TI  + KQI++ L
Sbjct: 76  LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           K        H+N                           +IVHRD+K  N+L++   G  
Sbjct: 136 KYL------HDN---------------------------QIVHRDIKGDNVLINTYSG-- 160
Query: 139 YPQPQHIKLKIADFGFARFL 158
                   LKI+DFG ++ L
Sbjct: 161 -------VLKISDFGTSKRL 173

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 33/137 (24%)
Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
           HH N++ LL   E   ++YL +E+   G+L D+L     L  D            L + Q
Sbjct: 74  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDL---ARIVHRDLKPQNILLSHSFGKQY 139
                      LLH            +   G D     + +HRDL  +NIL+  ++    
Sbjct: 134 -----------LLH---------FAADVARGMDYLSQKQFIHRDLAARNILVGENY---- 169
Query: 140 PQPQHIKLKIADFGFAR 156
                   KIADFG +R
Sbjct: 170 ------VAKIADFGLSR 180

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 45/140 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTL--SEDTIRIFLKQIVQAL 78
           L H+N+V+ L     +  + + ME   GG L+  L SK G L  +E TI  + KQI++ L
Sbjct: 62  LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 121
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           K        H+N                           +IVHRD+K  N+L++   G  
Sbjct: 122 KYL------HDN---------------------------QIVHRDIKGDNVLINTYSG-- 146
Query: 139 YPQPQHIKLKIADFGFARFL 158
                   LKI+DFG ++ L
Sbjct: 147 -------VLKISDFGTSKRL 159

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 46/158 (29%)
Query: 4   QSKSSIVLTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG 60
           +S+   V+ +  L+E   L +L H N+V LL      + ++LV E+C+   L +    + 
Sbjct: 38  ESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR 97
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
            + E  ++    Q +QA+                               FC+  +    +
Sbjct: 98  GVPEHLVKSITWQTLQAVN------------------------------FCHKHN---CI 124
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           HRD+KP+NIL++          +H  +K+ DFGFAR L
Sbjct: 125 HRDVKPENILIT----------KHSVIKLCDFGFARLL 152

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 46/140 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV E  +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 59  LKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L                               FC+     R++HRDLKPQN+L++    
Sbjct: 118 GL------------------------------AFCHS---HRVLHRDLKPQNLLINTEGA 144
Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 145 ----------IKLADFGLAR 154

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  +E   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 53/137 (38%), Gaps = 33/137 (24%)
Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
           HH N++ LL   E   ++YL +E+   G+L D+L     L  D            L + Q
Sbjct: 84  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDL---ARIVHRDLKPQNILLSHSFGKQY 139
                      LLH            +   G D     + +HRDL  +NIL+  ++    
Sbjct: 144 -----------LLH---------FAADVARGMDYLSQKQFIHRDLAARNILVGENY---- 179
Query: 140 PQPQHIKLKIADFGFAR 156
                   KIADFG +R
Sbjct: 180 ------VAKIADFGLSR 190

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 42/106 (39%)
Query: 83  VKELHHENVVELLHCKESDQHVYLVME--------FCNGGDLA----------------- 117
           +KEL+H N+V+LL    ++  +YLV E        F +   L                  
Sbjct: 55  LKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 118 -------RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
                  R++HRDLKPQN+L++              +K+ADFG AR
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGA----------IKLADFGLAR 150

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 43/130 (33%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +  QIV           
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----------- 151
Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                              L  E+ +  DL   ++RDLKP+N+++           Q   
Sbjct: 152 -------------------LTFEYLHSLDL---IYRDLKPENLMID----------QQGY 179
Query: 147 LKIADFGFAR 156
           +K+ DFG A+
Sbjct: 180 IKVTDFGLAK 189

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 36/149 (24%)
Query: 13  RHILKELTEL----HHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTI 67
           R ++ EL  L    HH NVV LL  C +    + +++EFC  G+L+ YL SK        
Sbjct: 75  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN------ 128
Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
                      +    K+L +++ + L H       V   MEF       + +HRDL  +
Sbjct: 129 -----------EFVPYKDL-YKDFLTLEHLIXYSFQVAKGMEFLAS---RKXIHRDLAAR 173
Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           NILLS          +   +KI DFG AR
Sbjct: 174 NILLS----------EKNVVKIXDFGLAR 192

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 65/149 (43%), Gaps = 32/149 (21%)
Query: 13  RHILKELTEL----HHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTI 67
           R ++ EL  L    HH NVV LL  C +    + +++EFC  G+L+ YL SK        
Sbjct: 77  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN------ 130
Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
                   + +   +  E  +++ + L H       V   MEF       + +HRDL  +
Sbjct: 131 --------EFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAAR 179
Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           NILLS          +   +KI DFG AR
Sbjct: 180 NILLS----------EKNVVKICDFGLAR 198

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 50/150 (33%)
Query: 16  LKELTELHHENVVELLHCKESD-----QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           +K L    HEN++ + + +  D       VY++ E     DL   ++S   LS+D I+ F
Sbjct: 60  IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DL-HRVISTQMLSDDHIQYF 117
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
           + Q ++A     VK LH  NV+                            HRDLKP N+L
Sbjct: 118 IYQTLRA-----VKVLHGSNVI----------------------------HRDLKPSNLL 144
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ++           +  LK+ DFG AR + +
Sbjct: 145 IN----------SNCDLKVCDFGLARIIDE 164

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 50/150 (33%)
Query: 16  LKELTELHHENVVELLHCKESD-----QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           +K L    HEN++ + + +  D       VY++ E     DL   ++S   LS+D I+ F
Sbjct: 60  IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DL-HRVISTQMLSDDHIQYF 117
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
           + Q ++A     VK LH  NV+                            HRDLKP N+L
Sbjct: 118 IYQTLRA-----VKVLHGSNVI----------------------------HRDLKPSNLL 144
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ++           +  LK+ DFG AR + +
Sbjct: 145 IN----------SNCDLKVCDFGLARIIDE 164

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 63/150 (42%), Gaps = 50/150 (33%)
Query: 16  LKELTELHHENVVELLHCKESD-----QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           +K L    HEN++ + + +  D       VY++ E     DL   ++S   LS+D I+ F
Sbjct: 60  IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQT-DL-HRVISTQMLSDDHIQYF 117
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
           + Q ++A     VK LH  NV+                            HRDLKP N+L
Sbjct: 118 IYQTLRA-----VKVLHGSNVI----------------------------HRDLKPSNLL 144
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ++           +  LK+ DFG AR + +
Sbjct: 145 IN----------SNCDLKVCDFGLARIIDE 164

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 44/124 (35%)
Query: 37  DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLH 96
           D  ++++ME+  GG   D L+  G L E  I   L++I++ L       LH E       
Sbjct: 97  DTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDY-----LHSE------- 143
Query: 97  CKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
                                + +HRD+K  N+LLS          +H ++K+ADFG A 
Sbjct: 144 ---------------------KKIHRDIKAANVLLS----------EHGEVKLADFGVAG 172
Query: 157 FLQD 160
            L D
Sbjct: 173 QLTD 176

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +
Sbjct: 74  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFY 133
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 134 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 160
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           +   +++ DFGFA+
Sbjct: 161 ID----------EQGYIQVTDFGFAK 176

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 44/124 (35%)
Query: 37  DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLH 96
           D  ++++ME+  GG   D L+  G L E  I   L++I++ L              + LH
Sbjct: 92  DTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGL--------------DYLH 136
Query: 97  CKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
            ++                    +HRD+K  N+LLS          +H ++K+ADFG A 
Sbjct: 137 SEKK-------------------IHRDIKAANVLLS----------EHGEVKLADFGVAG 167
Query: 157 FLQD 160
            L D
Sbjct: 168 QLTD 171

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 44/124 (35%)
Query: 37  DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLH 96
           D  ++++ME+  GG   D L+  G L E  I   L++I++ L              + LH
Sbjct: 77  DTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGL--------------DYLH 121
Query: 97  CKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
            ++                    +HRD+K  N+LLS          +H ++K+ADFG A 
Sbjct: 122 SEKK-------------------IHRDIKAANVLLS----------EHGEVKLADFGVAG 152
Query: 157 FLQD 160
            L D
Sbjct: 153 QLTD 156

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 64/156 (41%), Gaps = 46/156 (29%)
Query: 13  RHILKELTEL----HHENVVELL-HCKESDQHVYLVMEFCNGGDLADYLVSK-------G 60
           R ++ EL  L    HH NVV LL  C +    + +++EFC  G+L+ YL SK        
Sbjct: 75  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
              ED  + FL        +FQV +                      MEF       + +
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAK---------------------GMEFLAS---RKCI 170
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRDL  +NILLS          +   +KI DFG AR
Sbjct: 171 HRDLAARNILLS----------EKNVVKICDFGLAR 196

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 64/156 (41%), Gaps = 46/156 (29%)
Query: 13  RHILKELTEL----HHENVVELL-HCKESDQHVYLVMEFCNGGDLADYLVSK-------G 60
           R ++ EL  L    HH NVV LL  C +    + +++EFC  G+L+ YL SK        
Sbjct: 75  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
              ED  + FL        +FQV +                      MEF       + +
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAK---------------------GMEFLAS---RKCI 170
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRDL  +NILLS          +   +KI DFG AR
Sbjct: 171 HRDLAARNILLS----------EKNVVKICDFGLAR 196

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 53/124 (42%), Gaps = 44/124 (35%)
Query: 37  DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLH 96
           D  ++++ME+  GG   D L+  G L E  I   L++I++ L              + LH
Sbjct: 77  DTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGL--------------DYLH 121
Query: 97  CKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
            ++                    +HRD+K  N+LLS          +H ++K+ADFG A 
Sbjct: 122 SEKK-------------------IHRDIKAANVLLS----------EHGEVKLADFGVAG 152
Query: 157 FLQD 160
            L D
Sbjct: 153 QLTD 156

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 40/134 (29%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N+V L      +   YLV +   GG+L + +V++   SE      ++QI++A+   
Sbjct: 60  LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV--- 116
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                        LHC +                   +VHRDLKP+N+LL+        +
Sbjct: 117 -------------LHCHQMG-----------------VVHRDLKPENLLLAS-------K 139
Query: 142 PQHIKLKIADFGFA 155
            +   +K+ADFG A
Sbjct: 140 CKGAAVKLADFGLA 153

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 43/122 (35%)
Query: 35  ESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVEL 94
           + + ++Y+VME+  GG++  +L   G   E   R +  QIV                   
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIV------------------- 152
Query: 95  LHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGF 154
                      L  E+ +  DL   ++RDLKP+N+++           Q   +K+ DFGF
Sbjct: 153 -----------LTFEYLHSLDL---IYRDLKPENLMID----------QQGYIKVTDFGF 188
Query: 155 AR 156
           A+
Sbjct: 189 AK 190

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 64/156 (41%), Gaps = 46/156 (29%)
Query: 13  RHILKELTEL----HHENVVELL-HCKESDQHVYLVMEFCNGGDLADYLVSK-------G 60
           R ++ EL  L    HH NVV LL  C +    + +++EFC  G+L+ YL SK        
Sbjct: 75  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 134
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
              ED  + FL        +FQV +                      MEF       + +
Sbjct: 135 VAPEDLYKDFLTLEHLICYSFQVAK---------------------GMEFLAS---RKCI 170
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRDL  +NILLS          +   +KI DFG AR
Sbjct: 171 HRDLAARNILLS----------EKNVVKICDFGLAR 196

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 64/156 (41%), Gaps = 46/156 (29%)
Query: 13  RHILKELTEL----HHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSK-------G 60
           R ++ EL  L    HH NVV LL  C +    + +++EFC  G+L+ YL SK        
Sbjct: 112 RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 171
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
              ED  + FL        +FQV +                      MEF       + +
Sbjct: 172 VAPEDLYKDFLTLEHLICYSFQVAK---------------------GMEFLAS---RKCI 207
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRDL  +NILLS          +   +KI DFG AR
Sbjct: 208 HRDLAARNILLS----------EKNVVKICDFGLAR 233

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 64/156 (41%), Gaps = 46/156 (29%)
Query: 13  RHILKELTEL----HHENVVELL-HCKESDQHVYLVMEFCNGGDLADYLVSK-------G 60
           R ++ EL  L    HH NVV LL  C +    + +++EFC  G+L+ YL SK        
Sbjct: 66  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
              ED  + FL        +FQV +                      MEF       + +
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAK---------------------GMEFLAS---RKCI 161
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRDL  +NILLS          +   +KI DFG AR
Sbjct: 162 HRDLAARNILLS----------EKNVVKICDFGLAR 187

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G   E   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G   E   R +
Sbjct: 80  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY 139
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 140 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 166
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 167 ID----------QQGYIQVTDFGFAK 182

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G   E   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G   E   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 40/134 (29%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N+V L      +   YLV +   GG+L + +V++   SE      ++QI++++   
Sbjct: 60  LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN-- 117
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         HC     H+       NG     IVHRDLKP+N+LL+        +
Sbjct: 118 --------------HC-----HL-------NG-----IVHRDLKPENLLLAS-------K 139
Query: 142 PQHIKLKIADFGFA 155
            +   +K+ADFG A
Sbjct: 140 SKGAAVKLADFGLA 153

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G   E   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 63/156 (40%), Gaps = 46/156 (29%)
Query: 13  RHILKELTEL----HHENVVELL-HCKESDQHVYLVMEFCNGGDLADYLVSK-------G 60
           R ++ EL  L    HH NVV LL  C +    + ++ EFC  G+L+ YL SK        
Sbjct: 66  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
              ED  + FL        +FQV +                      MEF       + +
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAK---------------------GMEFLAS---RKCI 161
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRDL  +NILLS          +   +KI DFG AR
Sbjct: 162 HRDLAARNILLS----------EKNVVKICDFGLAR 187

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 43/130 (33%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           +V+L    + + ++Y+VME+  GG++  +L   G   E   R +  QIV           
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIV----------- 152
Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                              L  E+ +  DL   ++RDLKP+N+L+           Q   
Sbjct: 153 -------------------LTFEYLHSLDL---IYRDLKPENLLID----------QQGY 180
Query: 147 LKIADFGFAR 156
           +++ DFGFA+
Sbjct: 181 IQVTDFGFAK 190

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 63/156 (40%), Gaps = 46/156 (29%)
Query: 13  RHILKELTEL----HHENVVELL-HCKESDQHVYLVMEFCNGGDLADYLVSK-------G 60
           R ++ EL  L    HH NVV LL  C +    + ++ EFC  G+L+ YL SK        
Sbjct: 66  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
              ED  + FL        +FQV +                      MEF       + +
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAK---------------------GMEFLAS---RKCI 161
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRDL  +NILLS          +   +KI DFG AR
Sbjct: 162 HRDLAARNILLS----------EKNVVKICDFGLAR 187

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 51/138 (36%), Gaps = 43/138 (31%)
Query: 24  HENVVELLHCKESDQHVYLVME-FCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
           H  V+ LL   E+ +   LV+E      DL DY+  KG L E   R F  Q+V A++   
Sbjct: 97  HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQ--- 153
Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQP 142
                        HC                     +VHRD+K +NIL+    G      
Sbjct: 154 -------------HCHSRG-----------------VVHRDIKDENILIDLRRGCA---- 179
Query: 143 QHIKLKIADFGFARFLQD 160
                K+ DFG    L D
Sbjct: 180 -----KLIDFGSGALLHD 192

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 51/147 (34%)
Query: 16  LKELTELHHENVVELLHCKESDQHV------YLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           L+ L  + HENV+ LL     D+ +      YLVM F  G DL   L+    L ED I+ 
Sbjct: 75  LRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGK-LMKHEKLGEDRIQF 132
Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            + Q+++ L+               +H                    A I+HRDLKP N+
Sbjct: 133 LVYQMLKGLR--------------YIHA-------------------AGIIHRDLKPGNL 159
Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFAR 156
            ++          +  +LKI DFG AR
Sbjct: 160 AVN----------EDCELKILDFGLAR 176

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G   E   R +
Sbjct: 108 HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY 167
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 168 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 194
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 195 ID----------QQGYIQVTDFGFAK 210

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G   E   R +
Sbjct: 87  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY 146
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 147 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 173
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 174 ID----------QQGYIQVTDFGFAK 189

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 46/146 (31%)
Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G   E   R +
Sbjct: 82  HTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFY 141
Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QIV                              L  E+ +  DL   ++RDLKP+N+L
Sbjct: 142 AAQIV------------------------------LTFEYLHSLDL---IYRDLKPENLL 168
Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +           Q   +++ DFGFA+
Sbjct: 169 ID----------QQGYIQVTDFGFAK 184

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 63/156 (40%), Gaps = 46/156 (29%)
Query: 13  RHILKELTEL----HHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSK-------G 60
           R ++ EL  L    HH NVV LL  C +    + ++ EFC  G+L+ YL SK        
Sbjct: 66  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYK 125
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
              ED  + FL        +FQV +                      MEF       + +
Sbjct: 126 VAPEDLYKDFLTLEHLICYSFQVAK---------------------GMEFLAS---RKCI 161
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRDL  +NILLS          +   +KI DFG AR
Sbjct: 162 HRDLAARNILLS----------EKNVVKICDFGLAR 187

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 40/134 (29%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N+V L      +   YLV +   GG+L + +V++   SE      ++QI++++   
Sbjct: 60  LKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN-- 117
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                         HC     H+       NG     IVHRDLKP+N+LL+        +
Sbjct: 118 --------------HC-----HL-------NG-----IVHRDLKPENLLLAS-------K 139
Query: 142 PQHIKLKIADFGFA 155
            +   +K+ADFG A
Sbjct: 140 SKGAAVKLADFGLA 153

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 33/148 (22%)
Query: 16  LKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           +K LTE   H NV+     + +D+ +Y+ +E CN  +L D + SK    E+         
Sbjct: 59  IKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDEN--------- 108
Query: 75  VQALKAFQVKELHHENVVELLHCKESD-QHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
                   +K     N + LL    S   H++ +          +I+HRDLKPQNIL+S 
Sbjct: 109 --------LKLQKEYNPISLLRQIASGVAHLHSL----------KIIHRDLKPQNILVST 150
Query: 134 S---FGKQYPQPQHIKLKIADFGFARFL 158
           S      Q    +++++ I+DFG  + L
Sbjct: 151 SSRFTADQQTGAENLRILISDFGLCKKL 178

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 33/148 (22%)
Query: 16  LKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           +K LTE   H NV+     + +D+ +Y+ +E CN  +L D + SK    E+         
Sbjct: 77  IKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDEN--------- 126
Query: 75  VQALKAFQVKELHHENVVELLHCKESD-QHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
                   +K     N + LL    S   H++ +          +I+HRDLKPQNIL+S 
Sbjct: 127 --------LKLQKEYNPISLLRQIASGVAHLHSL----------KIIHRDLKPQNILVST 168
Query: 134 S---FGKQYPQPQHIKLKIADFGFARFL 158
           S      Q    +++++ I+DFG  + L
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKL 196

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 33/148 (22%)
Query: 16  LKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           +K LTE   H NV+     + +D+ +Y+ +E CN  +L D + SK    E+         
Sbjct: 77  IKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDEN--------- 126
Query: 75  VQALKAFQVKELHHENVVELLHCKESD-QHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
                   +K     N + LL    S   H++ +          +I+HRDLKPQNIL+S 
Sbjct: 127 --------LKLQKEYNPISLLRQIASGVAHLHSL----------KIIHRDLKPQNILVST 168
Query: 134 S---FGKQYPQPQHIKLKIADFGFARFL 158
           S      Q    +++++ I+DFG  + L
Sbjct: 169 SSRFTADQQTGAENLRILISDFGLCKKL 196

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 52/134 (38%), Gaps = 43/134 (32%)
Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
           +H  + +L  C ++   ++ VMEF NGGDL  ++       E   R +  +I+ AL    
Sbjct: 82  NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALM--- 138
Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQP 142
                       LH K                    I++RDLK  N+LL H         
Sbjct: 139 -----------FLHDK-------------------GIIYRDLKLDNVLLDHE-------- 160
Query: 143 QHIKLKIADFGFAR 156
            H KL  ADFG  +
Sbjct: 161 GHCKL--ADFGMCK 172

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 68/148 (45%), Gaps = 33/148 (22%)
Query: 16  LKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           +K LTE   H NV+     + +D+ +Y+ +E CN  +L D + SK    E+         
Sbjct: 59  IKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL-NLQDLVESKNVSDEN--------- 108
Query: 75  VQALKAFQVKELHHENVVELLHCKESD-QHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
                   +K     N + LL    S   H++ +          +I+HRDLKPQNIL+S 
Sbjct: 109 --------LKLQKEYNPISLLRQIASGVAHLHSL----------KIIHRDLKPQNILVST 150
Query: 134 S---FGKQYPQPQHIKLKIADFGFARFL 158
           S      Q    +++++ I+DFG  + L
Sbjct: 151 SSRFTADQQTGAENLRILISDFGLCKKL 178

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 49/148 (33%)
Query: 15  ILKELTELHHENVVELLHC---KESDQHVYLVMEFCN-GGDLADYL--VSKGTLSEDTIR 68
           +L+ L    H NVV L        +D+   L + F +   DL  YL  V +  +  +TI+
Sbjct: 64  VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             + Q+++ L              + LH                     R+VHRDLKPQN
Sbjct: 124 DMMFQLLRGL--------------DFLHSH-------------------RVVHRDLKPQN 150
Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           IL++ S           ++K+ADFG AR
Sbjct: 151 ILVTSSG----------QIKLADFGLAR 168

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 49/148 (33%)
Query: 15  ILKELTELHHENVVELLHC---KESDQHVYLVMEFCN-GGDLADYL--VSKGTLSEDTIR 68
           +L+ L    H NVV L        +D+   L + F +   DL  YL  V +  +  +TI+
Sbjct: 64  VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             + Q+++ L              + LH                     R+VHRDLKPQN
Sbjct: 124 DMMFQLLRGL--------------DFLHSH-------------------RVVHRDLKPQN 150
Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           IL++ S           ++K+ADFG AR
Sbjct: 151 ILVTSSG----------QIKLADFGLAR 168

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 74/193 (38%), Gaps = 68/193 (35%)
Query: 6   KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSED 65
           KS +VL R + K+   L+HE++V              + E    G+  +  V  G L  D
Sbjct: 95  KSGVVLHRAVPKDKWVLNHEDLV--------------LGEQIGRGNFGE--VFSGRLRAD 138
Query: 66  TIRIFLKQIVQAL----------KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD 115
              + +K   + L          +A  +K+  H N+V L+      Q +Y+VME   GGD
Sbjct: 139 NTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198
Query: 116 L--------ARI------------------------VHRDLKPQNILLSHSFGKQYPQPQ 143
                    AR+                        +HRDL  +N L++          +
Sbjct: 199 FLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT----------E 248
Query: 144 HIKLKIADFGFAR 156
              LKI+DFG +R
Sbjct: 249 KNVLKISDFGMSR 261

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 61/152 (40%), Gaps = 47/152 (30%)
Query: 13  RHILKELTELHHENVVELLHCKESDQHV----YLVMEFCNGGDLADYLVSKGTLSEDTIR 68
           R   +    L+H  +V +    E++       Y+VME+ +G  L D + ++G +   T +
Sbjct: 60  RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPK 116
Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             ++ I  A +A       H+N                            I+HRD+KP N
Sbjct: 117 RAIEVIADACQALN---FSHQN---------------------------GIIHRDVKPAN 146
Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           IL+S +            +K+ DFG AR + D
Sbjct: 147 ILISATNA----------VKVVDFGIARAIAD 168

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 74/193 (38%), Gaps = 68/193 (35%)
Query: 6   KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSED 65
           KS +VL R + K+   L+HE++V              + E    G+  +  V  G L  D
Sbjct: 95  KSGVVLHRAVPKDKWVLNHEDLV--------------LGEQIGRGNFGE--VFSGRLRAD 138
Query: 66  TIRIFLKQIVQAL----------KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD 115
              + +K   + L          +A  +K+  H N+V L+      Q +Y+VME   GGD
Sbjct: 139 NTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD 198
Query: 116 L--------ARI------------------------VHRDLKPQNILLSHSFGKQYPQPQ 143
                    AR+                        +HRDL  +N L++          +
Sbjct: 199 FLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT----------E 248
Query: 144 HIKLKIADFGFAR 156
              LKI+DFG +R
Sbjct: 249 KNVLKISDFGMSR 261

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 51/151 (33%)
Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGG---DLADYLVSK-----GTLSEDTI 67
           ++ +++ HH N+V           ++LVM+  +GG   D+  ++V+K     G L E TI
Sbjct: 59  IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 118
Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
              L+++++ L              E LH               NG      +HRD+K  
Sbjct: 119 ATILREVLEGL--------------EYLH--------------KNGQ-----IHRDVKAG 145
Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           NILL      Q          IADFG + FL
Sbjct: 146 NILLGEDGSVQ----------IADFGVSAFL 166

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 49/148 (33%)
Query: 15  ILKELTELHHENVVELLHC---KESDQHVYLVMEFCN-GGDLADYL--VSKGTLSEDTIR 68
           +L+ L    H NVV L        +D+   L + F +   DL  YL  V +  +  +TI+
Sbjct: 64  VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIK 123
Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             + Q+++ L              + LH                     R+VHRDLKPQN
Sbjct: 124 DMMFQLLRGL--------------DFLHSH-------------------RVVHRDLKPQN 150
Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           IL++ S           ++K+ADFG AR
Sbjct: 151 ILVTSSG----------QIKLADFGLAR 168

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 65/149 (43%), Gaps = 36/149 (24%)
Query: 13  RHILKELTEL----HHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTI 67
           R ++ EL  L    HH NVV LL  C +    + +++EFC  G+L+ YL SK        
Sbjct: 75  RALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRN------ 128
Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
                      +    K+L +++ + L H       V   MEF       + +HRDL  +
Sbjct: 129 -----------EFVPYKDL-YKDFLTLEHLICYSFQVAKGMEFLAS---RKXIHRDLAAR 173
Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           NILLS          +   +KI DFG AR
Sbjct: 174 NILLS----------EKNVVKICDFGLAR 192

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 33/137 (24%)
Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
           HH N++ LL   E   ++YL +E+   G+L D+L     L  D            L + Q
Sbjct: 81  HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 83  VKELHHENVVELLHCKESDQHVYLVMEFCNGGDL---ARIVHRDLKPQNILLSHSFGKQY 139
                      LLH            +   G D     + +HR+L  +NIL+  ++    
Sbjct: 141 -----------LLH---------FAADVARGMDYLSQKQFIHRNLAARNILVGENY---- 176
Query: 140 PQPQHIKLKIADFGFAR 156
                   KIADFG +R
Sbjct: 177 ------VAKIADFGLSR 187

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 51/151 (33%)
Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGG---DLADYLVSK-----GTLSEDTI 67
           ++ +++ HH N+V           ++LVM+  +GG   D+  ++V+K     G L E TI
Sbjct: 64  IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 123
Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
              L+++++ L              E LH               NG      +HRD+K  
Sbjct: 124 ATILREVLEGL--------------EYLH--------------KNGQ-----IHRDVKAG 150
Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           NILL      Q          IADFG + FL
Sbjct: 151 NILLGEDGSVQ----------IADFGVSAFL 171

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 43/130 (33%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL 86
           +V+L    + + ++Y+VME+  GG++  +L   G  SE   R +  QIV           
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIV----------- 151
Query: 87  HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK 146
                              L  E+ +  DL   ++RDLKP+N+++           Q   
Sbjct: 152 -------------------LTFEYLHSLDL---IYRDLKPENLMID----------QQGY 179
Query: 147 LKIADFGFAR 156
           +++ DFG A+
Sbjct: 180 IQVTDFGLAK 189

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 45/159 (28%)
Query: 2   ATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT 61
            T S  S +    I+K+L    H+ +V+L +   S++ +Y+V E+ N G L D+      
Sbjct: 44  GTMSPESFLEEAQIMKKL---KHDKLVQL-YAVVSEEPIYIVTEYMNKGSLLDF------ 93
Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
                           LK  + + L   N+V++     +       M +         +H
Sbjct: 94  ----------------LKDGEGRALKLPNLVDMAAQVAAGMAYIERMNY---------IH 128
Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDL+  NIL+ +           +  KIADFG AR ++D
Sbjct: 129 RDLRSANILVGNG----------LICKIADFGLARLIED 157

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 42/159 (26%)
Query: 1   VATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK- 59
           V T  +S     R  ++ ++ L H  +V L    E D  + ++ EF +GG+L + +  + 
Sbjct: 190 VMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH 249
Query: 60  GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARI 119
             +SED    +++Q+ + L         HEN                             
Sbjct: 250 NKMSEDEAVEYMRQVCKGLCHM------HEN---------------------------NY 276
Query: 120 VHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           VH DLKP+NI+ +     +        LK+ DFG    L
Sbjct: 277 VHLDLKPENIMFTTKRSNE--------LKLIDFGLTAHL 307

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 41/142 (28%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           +  L H+ +V L      ++ +Y++ EF   G L D+L      S++  ++ L +++   
Sbjct: 61  MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLK-----SDEGGKVLLPKLID-- 113
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                       + E +   E   +                +HRDL+  N+L+S S    
Sbjct: 114 --------FSAQIAEGMAYIERKNY----------------IHRDLRAANVLVSES---- 145
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
                 +  KIADFG AR ++D
Sbjct: 146 ------LMCKIADFGLARVIED 161

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 44/136 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + + HH+NVV++         +++VMEF  GG L D +V+   ++E+ I      +++AL
Sbjct: 96  MRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRAL 154
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH++ V                            +HRD+K  +ILL+      
Sbjct: 155 SY-----LHNQGV----------------------------IHRDIKSDSILLTSDG--- 178
Query: 139 YPQPQHIKLKIADFGF 154
                  ++K++DFGF
Sbjct: 179 -------RIKLSDFGF 187

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N++ L         VYL++E+   G++   L       E     ++ ++  AL   
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANAL--- 126
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                                       +C+     R++HRD+KP+N+LL  S G     
Sbjct: 127 ---------------------------SYCHS---KRVIHRDIKPENLLLG-SAG----- 150
Query: 142 PQHIKLKIADFGFA 155
               +LKIADFG++
Sbjct: 151 ----ELKIADFGWS 160

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 43/134 (32%)
Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N++ L         VYL++E+   G++   L       E     ++ ++  AL   
Sbjct: 70  LRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANAL--- 126
Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                                       +C+     R++HRD+KP+N+LL  S G     
Sbjct: 127 ---------------------------SYCHS---KRVIHRDIKPENLLLG-SAG----- 150
Query: 142 PQHIKLKIADFGFA 155
               +LKIADFG++
Sbjct: 151 ----ELKIADFGWS 160

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 45/159 (28%)
Query: 2   ATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT 61
            T S  + +    ++K+L    HE +V+L +   S++ +Y+VME+ + G L D+L  KG 
Sbjct: 53  GTMSPEAFLQEAQVMKKL---RHEKLVQL-YAVVSEEPIYIVMEYMSKGCLLDFL--KGE 106
Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
           +                     K L    +V++     S       M +         VH
Sbjct: 107 MG--------------------KYLRLPQLVDMAAQIASGMAYVERMNY---------VH 137
Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDL+  NIL+           +++  K+ADFG AR ++D
Sbjct: 138 RDLRAANILVG----------ENLVCKVADFGLARLIED 166

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 47/152 (30%)
Query: 13  RHILKELTELHHENVVELLHCKESDQHV----YLVMEFCNGGDLADYLVSKGTLSEDTIR 68
           R   +    L+H  +V +    E++       Y+VME+ +G  L D + ++G +   T +
Sbjct: 60  RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPK 116
Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             ++ I  A +A       H+N                            I+HRD+KP N
Sbjct: 117 RAIEVIADACQALN---FSHQN---------------------------GIIHRDVKPAN 146
Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           I++S +            +K+ DFG AR + D
Sbjct: 147 IMISATNA----------VKVMDFGIARAIAD 168

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 47/152 (30%)
Query: 13  RHILKELTELHHENVVELLHCKESDQHV----YLVMEFCNGGDLADYLVSKGTLSEDTIR 68
           R   +    L+H  +V +    E++       Y+VME+ +G  L D + ++G +   T +
Sbjct: 60  RREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPK 116
Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             ++ I  A +A       H+N                            I+HRD+KP N
Sbjct: 117 RAIEVIADACQALN---FSHQN---------------------------GIIHRDVKPAN 146
Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           I++S +            +K+ DFG AR + D
Sbjct: 147 IMISATNA----------VKVMDFGIARAIAD 168

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 47/152 (30%)
Query: 13  RHILKELTELHHENVVELLHCKESDQHV----YLVMEFCNGGDLADYLVSKGTLSEDTIR 68
           R   +    L+H  +V +    E++       Y+VME+ +G  L D + ++G +   T +
Sbjct: 60  RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPK 116
Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             ++ I  A +A       H+N                            I+HRD+KP N
Sbjct: 117 RAIEVIADACQALN---FSHQN---------------------------GIIHRDVKPAN 146
Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           I++S +            +K+ DFG AR + D
Sbjct: 147 IMISATNA----------VKVMDFGIARAIAD 168

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 62/159 (38%), Gaps = 42/159 (26%)
Query: 1   VATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK- 59
           V T  +S     R  ++ ++ L H  +V L    E D  + ++ EF +GG+L + +  + 
Sbjct: 84  VMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEH 143
Query: 60  GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARI 119
             +SED    +++Q+ + L         HEN                             
Sbjct: 144 NKMSEDEAVEYMRQVCKGLCHM------HEN---------------------------NY 170
Query: 120 VHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           VH DLKP+NI+ +     +        LK+ DFG    L
Sbjct: 171 VHLDLKPENIMFTTKRSNE--------LKLIDFGLTAHL 201

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 47/152 (30%)
Query: 13  RHILKELTELHHENVVELLHCKESDQHV----YLVMEFCNGGDLADYLVSKGTLSEDTIR 68
           R   +    L+H  +V +    E++       Y+VME+ +G  L D + ++G +   T +
Sbjct: 60  RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPK 116
Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             ++ I  A +A       H+N                            I+HRD+KP N
Sbjct: 117 RAIEVIADACQALN---FSHQN---------------------------GIIHRDVKPAN 146
Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           I++S +            +K+ DFG AR + D
Sbjct: 147 IMISATNA----------VKVMDFGIARAIAD 168

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 44/138 (31%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDL-ADYLVSKGTLSEDTIRIFLKQIVQA 77
           L    H N+V+LL     + ++++++EFC GG + A  L  +  L+E  I++  KQ + A
Sbjct: 88  LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 147
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L         H+N                           +I+HRDLK  NIL +     
Sbjct: 148 LNYL------HDN---------------------------KIIHRDLKAGNILFTLDG-- 172
Query: 138 QYPQPQHIKLKIADFGFA 155
                    +K+ADFG +
Sbjct: 173 --------DIKLADFGVS 182

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 45/159 (28%)
Query: 2   ATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT 61
            T S  + +    ++K+L    HE +V+L +   S++ +Y+V+E+ + G L D+L  KG 
Sbjct: 53  GTMSPEAFLQEAQVMKKL---RHEKLVQL-YAVVSEEPIYIVIEYMSKGSLLDFL--KGE 106
Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
           +                     K L    +V++     S       M +         VH
Sbjct: 107 MG--------------------KYLRLPQLVDMAAQIASGMAYVERMNY---------VH 137
Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDL+  NIL+           +++  K+ADFG AR ++D
Sbjct: 138 RDLRAANILVG----------ENLVCKVADFGLARLIED 166

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 35/137 (25%)
Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     D  +Y+++E+ + G+L +YL ++     +              ++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEX-------------SYDI 146
Query: 84  KELHHENVV--ELLHC--KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
             +  E +   +L+ C  + +    YL  + C        +HRDL  +N+L++       
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--------IHRDLAARNVLVT------- 191
Query: 140 PQPQHIKLKIADFGFAR 156
              ++  +KIADFG AR
Sbjct: 192 ---ENNVMKIADFGLAR 205

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 35/137 (25%)
Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     D  +Y+++E+ + G+L +YL ++     +              ++ +
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-------------SYDI 192
Query: 84  KELHHENVV--ELLHC--KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
             +  E +   +L+ C  + +    YL  + C        +HRDL  +N+L++       
Sbjct: 193 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--------IHRDLAARNVLVT------- 237
Query: 140 PQPQHIKLKIADFGFAR 156
              ++  +KIADFG AR
Sbjct: 238 ---ENNVMKIADFGLAR 251

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 45/159 (28%)
Query: 2   ATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT 61
            T S  + +    ++K+L    HE +V+L +   S++ +Y+V+E+ + G L D+L  KG 
Sbjct: 53  GTMSPEAFLQEAQVMKKL---RHEKLVQL-YAVVSEEPIYIVIEYMSKGSLLDFL--KGE 106
Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
           +                     K L    +V++     S       M +         VH
Sbjct: 107 MG--------------------KYLRLPQLVDMAAQIASGMAYVERMNY---------VH 137
Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDL+  NIL+           +++  K+ADFG AR ++D
Sbjct: 138 RDLRAANILVG----------ENLVCKVADFGLARLIED 166

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 44/138 (31%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDL-ADYLVSKGTLSEDTIRIFLKQIVQA 77
           L    H N+V+LL     + ++++++EFC GG + A  L  +  L+E  I++  KQ + A
Sbjct: 88  LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 147
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L         H+N                           +I+HRDLK  NIL +     
Sbjct: 148 LNYL------HDN---------------------------KIIHRDLKAGNILFTLDG-- 172
Query: 138 QYPQPQHIKLKIADFGFA 155
                    +K+ADFG +
Sbjct: 173 --------DIKLADFGVS 182

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 44/138 (31%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDL-ADYLVSKGTLSEDTIRIFLKQIVQA 77
           L    H N+V+LL     + ++++++EFC GG + A  L  +  L+E  I++  KQ + A
Sbjct: 88  LASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA 147
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L         H+N                           +I+HRDLK  NIL +     
Sbjct: 148 LNYL------HDN---------------------------KIIHRDLKAGNILFTLDG-- 172
Query: 138 QYPQPQHIKLKIADFGFA 155
                    +K+ADFG +
Sbjct: 173 --------DIKLADFGVS 182

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 45/159 (28%)
Query: 2   ATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT 61
            T S  + +    ++K+L    HE +V+L +   S++ +Y+V E+ N G L D+      
Sbjct: 50  GTMSPEAFLQEAQVMKKL---RHEKLVQL-YAVVSEEPIYIVTEYMNKGSLLDF------ 99
Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
                           LK    K L    +V++     S       M +         VH
Sbjct: 100 ----------------LKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---------VH 134
Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDL+  NIL+           +++  K+ADFG AR ++D
Sbjct: 135 RDLRAANILVG----------ENLVCKVADFGLARLIED 163

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 45/159 (28%)
Query: 2   ATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT 61
            T S  + +    ++K+L    HE +V+L +   S++ +Y+V E+ N G L D+      
Sbjct: 50  GTMSPEAFLQEAQVMKKL---RHEKLVQL-YAVVSEEPIYIVTEYMNKGSLLDF------ 99
Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
                           LK    K L    +V++     S       M +         VH
Sbjct: 100 ----------------LKGETGKYLRLPQLVDMSAQIASGMAYVERMNY---------VH 134
Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDL+  NIL+           +++  K+ADFG AR ++D
Sbjct: 135 RDLRAANILVG----------ENLVCKVADFGLARLIED 163

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 44/142 (30%)
Query: 21  ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA 80
           +L H N+V L    + +   YLV +   GG+L + +V++   SE      ++QI++++  
Sbjct: 84  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA- 142
Query: 81  FQVKELHHENVVELLHCKESDQHVYLVMEFC--NGGDLARIVHRDLKPQNILLSHSFGKQ 138
                                        +C  NG     IVHR+LKP+N+LL+      
Sbjct: 143 -----------------------------YCHSNG-----IVHRNLKPENLLLAS----- 163
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             + +   +K+ADFG A  + D
Sbjct: 164 --KAKGAAVKLADFGLAIEVND 183

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 44/142 (30%)
Query: 21  ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA 80
           +L H N+V L    + +   YLV +   GG+L + +V++   SE      ++QI++++  
Sbjct: 61  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA- 119
Query: 81  FQVKELHHENVVELLHCKESDQHVYLVMEFC--NGGDLARIVHRDLKPQNILLSHSFGKQ 138
                                        +C  NG     IVHR+LKP+N+LL+      
Sbjct: 120 -----------------------------YCHSNG-----IVHRNLKPENLLLAS----- 140
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             + +   +K+ADFG A  + D
Sbjct: 141 --KAKGAAVKLADFGLAIEVND 160

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 45/121 (37%)
Query: 37  DQHVYLVMEFCNGGDLADYLV-SKG-TLSEDTIRIFLKQIVQALKAFQVKELHHENVVEL 94
           D  ++LVMEFC  G + D +  +KG TL E+ I    ++I++ L       LH       
Sbjct: 99  DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL-----SHLH------- 146
Query: 95  LHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGF 154
                  QH              +++HRD+K QN+LL+          ++ ++K+ DFG 
Sbjct: 147 -------QH--------------KVIHRDIKGQNVLLT----------ENAEVKLVDFGV 175
Query: 155 A 155
           +
Sbjct: 176 S 176

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 44/142 (30%)
Query: 21  ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA 80
           +L H N+V L    + +   YLV +   GG+L + +V++   SE      ++QI++++  
Sbjct: 61  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA- 119
Query: 81  FQVKELHHENVVELLHCKESDQHVYLVMEFC--NGGDLARIVHRDLKPQNILLSHSFGKQ 138
                                        +C  NG     IVHR+LKP+N+LL+      
Sbjct: 120 -----------------------------YCHSNG-----IVHRNLKPENLLLAS----- 140
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             + +   +K+ADFG A  + D
Sbjct: 141 --KAKGAAVKLADFGLAIEVND 160

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 58/136 (42%), Gaps = 33/136 (24%)
Query: 23  HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ 82
            HEN+V LL        V ++ E+C  GDL ++L  K             ++++   AF 
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK------------SRVLETDPAFA 155
Query: 83  VKELHHENVVELLHCKE--SDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYP 140
           +      +  +LLH     +    +L  + C        +HRD+  +N+LL++       
Sbjct: 156 IAN-STASTRDLLHFSSQVAQGMAFLASKNC--------IHRDVAARNVLLTNG------ 200
Query: 141 QPQHIKLKIADFGFAR 156
              H+  KI DFG AR
Sbjct: 201 ---HVA-KIGDFGLAR 212

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 61/152 (40%), Gaps = 47/152 (30%)
Query: 13  RHILKELTELHHENVVELLHCKESDQHV----YLVMEFCNGGDLADYLVSKGTLSEDTIR 68
           R   +    L+H  +V +    E++       Y+VME+ +G  L D + ++G +   T +
Sbjct: 77  RREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPK 133
Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             ++ I  A +A       H+N                            I+HRD+KP N
Sbjct: 134 RAIEVIADACQALN---FSHQN---------------------------GIIHRDVKPAN 163
Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           I++S +            +K+ DFG AR + D
Sbjct: 164 IMISATNA----------VKVMDFGIARAIAD 185

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 64/156 (41%), Gaps = 51/156 (32%)
Query: 8   SIVLTRHILKELTELHHENVVELLH-CKES----DQHVYLVMEFCNGGDLADYL--VSKG 60
           S V    +L+ L    H NVV L+  C  S    +  V LV E  +  DL  YL      
Sbjct: 57  STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP 115
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
            L  +TI+  ++Q ++ L              + LH              C       IV
Sbjct: 116 GLPAETIKDLMRQFLRGL--------------DFLHAN------------C-------IV 142
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRDLKP+NIL++ S G          +K+ADFG AR
Sbjct: 143 HRDLKPENILVT-SGG---------TVKLADFGLAR 168

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 64/156 (41%), Gaps = 51/156 (32%)
Query: 8   SIVLTRHILKELTELHHENVVELLH-CKES----DQHVYLVMEFCNGGDLADYL--VSKG 60
           S V    +L+ L    H NVV L+  C  S    +  V LV E  +  DL  YL      
Sbjct: 49  STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP 107
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
            L  +TI+  ++Q ++ L              + LH              C       IV
Sbjct: 108 GLPAETIKDLMRQFLRGL--------------DFLHAN------------C-------IV 134
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRDLKP+NIL++ S G          +K+ADFG AR
Sbjct: 135 HRDLKPENILVT-SGG---------TVKLADFGLAR 160

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 44/136 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +  H NVVE+       + ++++MEF  GG L D +VS+  L+E+ I    + ++QAL
Sbjct: 96  MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQAL 154
Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH + V                            +HRD+K  +ILL+      
Sbjct: 155 AY-----LHAQGV----------------------------IHRDIKSDSILLTLDG--- 178
Query: 139 YPQPQHIKLKIADFGF 154
                  ++K++DFGF
Sbjct: 179 -------RVKLSDFGF 187

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 55/144 (38%), Gaps = 33/144 (22%)
Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           R   K    L H N++ L      + ++ LVMEF  GG L   L  K  +  D +  +  
Sbjct: 54  RQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAV 112
Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           QI + +       LH E +V                          I+HRDLK  NIL+ 
Sbjct: 113 QIARGM-----NYLHDEAIVP-------------------------IIHRDLKSSNILIL 142
Query: 133 HSFGKQYPQPQHIKLKIADFGFAR 156
                +     +  LKI DFG AR
Sbjct: 143 QKV--ENGDLSNKILKITDFGLAR 164

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 72/172 (41%), Gaps = 66/172 (38%)
Query: 9   IVLT-----RHILKELT---ELHHENVV---ELLHCKESD-----------QHVYLVMEF 46
           IVLT     +H L+E+     L H+N+V   E+L    S              VY+V E+
Sbjct: 44  IVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEY 103
Query: 47  CNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL 106
               DLA+ L  +G L E+  R+F+ Q+++ LK      +H  NV+              
Sbjct: 104 MET-DLANVL-EQGPLLEEHARLFMYQLLRGLKY-----IHSANVL-------------- 142
Query: 107 VMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
                         HRDLKP N+ ++          + + LKI DFG AR +
Sbjct: 143 --------------HRDLKPANLFINT---------EDLVLKIGDFGLARIM 171

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 44/142 (30%)
Query: 21  ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA 80
           +L H N+V L    + +   YLV +   GG+L + +V++   SE      ++QI++++  
Sbjct: 60  KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA- 118
Query: 81  FQVKELHHENVVELLHCKESDQHVYLVMEFC--NGGDLARIVHRDLKPQNILLSHSFGKQ 138
                                        +C  NG     IVHR+LKP+N+LL+      
Sbjct: 119 -----------------------------YCHSNG-----IVHRNLKPENLLLAS----- 139
Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             + +   +K+ADFG A  + D
Sbjct: 140 --KAKGAAVKLADFGLAIEVND 159

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 64/156 (41%), Gaps = 51/156 (32%)
Query: 8   SIVLTRHILKELTELHHENVVELLH-CKES----DQHVYLVMEFCNGGDLADYL--VSKG 60
           S V    +L+ L    H NVV L+  C  S    +  V LV E  +  DL  YL      
Sbjct: 49  STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP 107
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
            L  +TI+  ++Q ++ L              + LH              C       IV
Sbjct: 108 GLPAETIKDLMRQFLRGL--------------DFLHAN------------C-------IV 134
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRDLKP+NIL++ S G          +K+ADFG AR
Sbjct: 135 HRDLKPENILVT-SGG---------TVKLADFGLAR 160

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 6   KSSIVLTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL--VSKG 60
           K   +     LKE   + E+ H N+V+LL     +   Y++ EF   G+L DYL   ++ 
Sbjct: 254 KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQ 313
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEF 110
            +S   +     QI  A++  + K   H N+    +C   + H+  V +F
Sbjct: 314 EVSAVVLLYMATQISSAMEYLEKKNFIHRNLAA-RNCLVGENHLVKVADF 362

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 46/141 (32%)
Query: 19  LTELHHENVVELLHC-KESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIV 75
           +T+L H N+V+LL    E    +Y+V E+   G L DYL S+G   L  D +  F   + 
Sbjct: 53  MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 112
Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           +A                              ME+  G +    VHRDL  +N+L+S   
Sbjct: 113 EA------------------------------MEYLEGNNF---VHRDLAARNVLVS--- 136
Query: 136 GKQYPQPQHIKLKIADFGFAR 156
                  +    K++DFG  +
Sbjct: 137 -------EDNVAKVSDFGLTK 150

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 46/141 (32%)
Query: 19  LTELHHENVVELLHC-KESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIV 75
           +T+L H N+V+LL    E    +Y+V E+   G L DYL S+G   L  D +  F   + 
Sbjct: 59  MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 118
Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           +A                              ME+  G +    VHRDL  +N+L+S   
Sbjct: 119 EA------------------------------MEYLEGNNF---VHRDLAARNVLVS--- 142
Query: 136 GKQYPQPQHIKLKIADFGFAR 156
                  +    K++DFG  +
Sbjct: 143 -------EDNVAKVSDFGLTK 156

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 64/156 (41%), Gaps = 51/156 (32%)
Query: 8   SIVLTRHILKELTELHHENVVELLH-CKES----DQHVYLVMEFCNGGDLADYL--VSKG 60
           S V    +L+ L    H NVV L+  C  S    +  V LV E  +  DL  YL      
Sbjct: 49  STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPP 107
Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
            L  +TI+  ++Q ++ L              + LH              C       IV
Sbjct: 108 GLPAETIKDLMRQFLRGL--------------DFLHAN------------C-------IV 134
Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRDLKP+NIL++ S G          +K+ADFG AR
Sbjct: 135 HRDLKPENILVT-SGG---------TVKLADFGLAR 160

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 35/137 (25%)
Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     D  +Y+++E+ + G+L +YL ++     +              ++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-------------SYDI 146
Query: 84  KELHHENVV--ELLHC--KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
             +  E +   +L+ C  + +    YL  + C        +HRDL  +N+L++       
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--------IHRDLAARNVLVT------- 191
Query: 140 PQPQHIKLKIADFGFAR 156
              ++  +KIADFG AR
Sbjct: 192 ---ENNVMKIADFGLAR 205

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 17/97 (17%)
Query: 65  DTIRIFLKQIVQALKAFQVKELHHENVVELLHCKE-SDQHV-YLVMEFCNGGDL---ARI 119
           D IR     I Q    + V++L   ++ +LL C+  S+ H+ Y + +   G      A +
Sbjct: 92  DIIRA--PTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 120 VHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           +HRDLKP N+LL+ +            LKI DFG AR
Sbjct: 150 LHRDLKPSNLLLNTT----------CDLKICDFGLAR 176

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 35/137 (25%)
Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     D  +Y+++E+ + G+L +YL ++     +              ++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-------------SYDI 146
Query: 84  KELHHENVV--ELLHC--KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
             +  E +   +L+ C  + +    YL  + C        +HRDL  +N+L++       
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--------IHRDLAARNVLVT------- 191
Query: 140 PQPQHIKLKIADFGFAR 156
              ++  +KIADFG AR
Sbjct: 192 ---ENNVMKIADFGLAR 205

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 46/141 (32%)
Query: 19  LTELHHENVVELLHC-KESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIV 75
           +T+L H N+V+LL    E    +Y+V E+   G L DYL S+G   L  D +  F   + 
Sbjct: 68  MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 127
Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           +A                              ME+  G +    VHRDL  +N+L+S   
Sbjct: 128 EA------------------------------MEYLEGNNF---VHRDLAARNVLVS--- 151
Query: 136 GKQYPQPQHIKLKIADFGFAR 156
                  +    K++DFG  +
Sbjct: 152 -------EDNVAKVSDFGLTK 165

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 57/141 (40%), Gaps = 46/141 (32%)
Query: 19  LTELHHENVVELLHC-KESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIV 75
           +T+L H N+V+LL    E    +Y+V E+   G L DYL S+G   L  D +  F   + 
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 299
Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           +A                              ME+  G +    VHRDL  +N+L+S   
Sbjct: 300 EA------------------------------MEYLEGNNF---VHRDLAARNVLVS--- 323
Query: 136 GKQYPQPQHIKLKIADFGFAR 156
                  +    K++DFG  +
Sbjct: 324 -------EDNVAKVSDFGLTK 337

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 35/137 (25%)
Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     D  +Y+++E+ + G+L +YL ++     +              ++ +
Sbjct: 89  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-------------SYDI 135
Query: 84  KELHHENVV--ELLHC--KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
             +  E +   +L+ C  + +    YL  + C        +HRDL  +N+L++       
Sbjct: 136 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--------IHRDLAARNVLVT------- 180
Query: 140 PQPQHIKLKIADFGFAR 156
              ++  +KIADFG AR
Sbjct: 181 ---ENNVMKIADFGLAR 194

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 35/137 (25%)
Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     D  +Y+++E+ + G+L +YL ++     +              ++ +
Sbjct: 87  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-------------SYDI 133
Query: 84  KELHHENVV--ELLHC--KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
             +  E +   +L+ C  + +    YL  + C        +HRDL  +N+L++       
Sbjct: 134 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--------IHRDLTARNVLVT------- 178
Query: 140 PQPQHIKLKIADFGFAR 156
              ++  +KIADFG AR
Sbjct: 179 ---ENNVMKIADFGLAR 192

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 35/137 (25%)
Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     D  +Y+++E+ + G+L +YL ++     +              ++ +
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-------------SYDI 146
Query: 84  KELHHENVV--ELLHC--KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
             +  E +   +L+ C  + +    YL  + C        +HRDL  +N+L++       
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--------IHRDLAARNVLVT------- 191
Query: 140 PQPQHIKLKIADFGFAR 156
              ++  +KIADFG AR
Sbjct: 192 ---ENNVMKIADFGLAR 205

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 45/159 (28%)
Query: 2   ATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT 61
            T S  + +    ++K+L    HE +V+L +   S++ +Y+V E+ + G L D+L  KG 
Sbjct: 44  GTMSPEAFLQEAQVMKKL---RHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFL--KGE 97
Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
           +                     K L    +V++     S       M +         VH
Sbjct: 98  MG--------------------KYLRLPQLVDMAAQIASGMAYVERMNY---------VH 128
Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDL+  NIL+           +++  K+ADFG AR ++D
Sbjct: 129 RDLRAANILVG----------ENLVCKVADFGLARLIED 157

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 45/159 (28%)
Query: 2   ATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT 61
            T S  + +    ++K+L    HE +V+L +   S++ +Y+V E+ + G L D+L  KG 
Sbjct: 53  GTMSPEAFLQEAQVMKKL---RHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFL--KGE 106
Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
           +                     K L    +V++     S       M +         VH
Sbjct: 107 MG--------------------KYLRLPQLVDMAAQIASGMAYVERMNY---------VH 137
Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDL+  NIL+           +++  K+ADFG AR ++D
Sbjct: 138 RDLRAANILVG----------ENLVCKVADFGLARLIED 166

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 45/159 (28%)
Query: 2   ATQSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT 61
            T S  + +    ++K+L    HE +V+L +   S++ +Y+V E+ + G L D+L  KG 
Sbjct: 42  GTMSPEAFLQEAQVMKKL---RHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFL--KGE 95
Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
           +                     K L    +V++     S       M +         VH
Sbjct: 96  MG--------------------KYLRLPQLVDMAAQIASGMAYVERMNY---------VH 126
Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDL+  NIL+           +++  K+ADFG AR ++D
Sbjct: 127 RDLRAANILVG----------ENLVCKVADFGLARLIED 155

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 35/137 (25%)
Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     D  +Y+++E+ + G+L +YL ++     +              ++ +
Sbjct: 92  HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-------------SYDI 138
Query: 84  KELHHENVV--ELLHC--KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
             +  E +   +L+ C  + +    YL  + C        +HRDL  +N+L++       
Sbjct: 139 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--------IHRDLAARNVLVT------- 183
Query: 140 PQPQHIKLKIADFGFAR 156
              ++  +KIADFG AR
Sbjct: 184 ---ENNVMKIADFGLAR 197

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 44/128 (34%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKE 85
           +  L +  + + H+YLVM++  GGDL   L   +  L ED  R ++ ++V A+ +  + +
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS--IHQ 193
Query: 86  LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHI 145
           LH+                               VHRD+KP N+LL  +         HI
Sbjct: 194 LHY-------------------------------VHRDIKPDNVLLDVN--------GHI 214
Query: 146 KLKIADFG 153
           +L  ADFG
Sbjct: 215 RL--ADFG 220

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 44/128 (34%)
Query: 27  VVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKE 85
           +  L +  + + H+YLVM++  GGDL   L   +  L ED  R ++ ++V A+ +  + +
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS--IHQ 209
Query: 86  LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHI 145
           LH+                               VHRD+KP N+LL  +         HI
Sbjct: 210 LHY-------------------------------VHRDIKPDNVLLDVN--------GHI 230
Query: 146 KLKIADFG 153
           +L  ADFG
Sbjct: 231 RL--ADFG 236

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 45/139 (32%)
Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQA 77
           L +L H N+V L     +++ + LV E+ +  DL  YL   G + +   +++FL Q+++ 
Sbjct: 54  LKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRG 112
Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L                               +C+     +++HRDLKPQN+L++     
Sbjct: 113 LA------------------------------YCHR---QKVLHRDLKPQNLLIN----- 134
Query: 138 QYPQPQHIKLKIADFGFAR 156
                +  +LK+ADFG AR
Sbjct: 135 -----ERGELKLADFGLAR 148

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/137 (22%), Positives = 63/137 (45%), Gaps = 35/137 (25%)
Query: 24  HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV 83
           H+N++ LL     D  +Y+++E+ + G+L +YL ++     +              ++ +
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEY-------------SYDI 146
Query: 84  KELHHENVV--ELLHC--KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
             +  E +   +L+ C  + +    YL  + C        +HRDL  +N+L++       
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLASQKC--------IHRDLAARNVLVT------- 191
Query: 140 PQPQHIKLKIADFGFAR 156
              ++  +KIADFG AR
Sbjct: 192 ---ENNVMKIADFGLAR 205

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	160
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-33
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-31
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-31
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	4e-31
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	5e-30
3bhy_A	283	Death-associated protein kinase 3; death associate	5e-29
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-28
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	2e-28
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	2e-28
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-28
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	3e-28
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	4e-28
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	4e-28
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	6e-28
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	7e-28
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	9e-28
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-27
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	4e-27
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-27
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	8e-27
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	8e-27
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	1e-26
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-26
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-26
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	3e-26
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	5e-26
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	6e-26
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	8e-26
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	8e-26
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	1e-25
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-25
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	1e-25
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	1e-25
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-25
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	2e-25
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	4e-25
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	4e-25
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	4e-25
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	5e-25
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-25
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	5e-25
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	9e-25
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	1e-24
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	2e-24
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-24
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-24
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-24
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	3e-24
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	3e-24
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-24
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-24
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-24
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	8e-24
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	9e-24
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-23
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-23
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	4e-23
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	4e-23
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-23
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	5e-23
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	5e-23
3o0g_A	292	Cell division protein kinase 5; kinase activator c	9e-23
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	1e-22
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	1e-22
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-22
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	2e-22
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-22
3niz_A	311	Rhodanese family protein; structural genomics, str	3e-22
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	3e-22
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	3e-22
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-22
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	6e-22
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	7e-22
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-21
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	1e-21
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-21
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	2e-21
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-21
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	6e-21
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-20
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-20
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-20
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	3e-20
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-20
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	4e-20
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	5e-20
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-20
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	6e-20
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-19
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	1e-19
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	1e-19
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-19
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-19
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-19
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-19
3ork_A	311	Serine/threonine protein kinase; structural genomi	8e-19
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	2e-18
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-18
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-18
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-18
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	2e-18
2dyl_A	318	Dual specificity mitogen-activated protein kinase	4e-18
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	4e-18
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	7e-18
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-17
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	2e-17
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-17
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	3e-17
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-17
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	4e-17
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	4e-17
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	5e-17
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	6e-17
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	6e-17
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	7e-17
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	9e-17
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-16
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-16
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-16
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-16
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	3e-16
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	4e-16
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-16
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	5e-16
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	5e-16
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	5e-16
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	6e-16
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	6e-16
3q4u_A	301	Activin receptor type-1; structural genomics conso	7e-16
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	8e-16
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	9e-16
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	9e-16
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	9e-16
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-15
3fme_A	290	Dual specificity mitogen-activated protein kinase;	2e-15
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-15
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	2e-15
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-15
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	3e-15
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-15
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	3e-15
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-15
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	4e-15
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-15
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	5e-15
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	5e-15
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-15
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	6e-15
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	7e-15
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	8e-15
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	8e-15
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	8e-15
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	9e-15
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	9e-15
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	9e-15
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-14
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-14
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	1e-14
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-14
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-14
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	2e-14
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-14
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-14
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	2e-14
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	2e-14
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-14
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-14
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	2e-14
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	3e-14
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-14
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	6e-14
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	8e-14
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	9e-14
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	9e-14
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	9e-14
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	9e-14
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-13
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-13
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	1e-13
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-13
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-13
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-13
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	2e-13
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-13
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	2e-13
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	2e-13
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-13
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	3e-13
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-13
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	3e-13
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	3e-13
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	3e-13
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-13
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	4e-13
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-13
3pls_A	298	Macrophage-stimulating protein receptor; protein k	4e-13
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	5e-13
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	6e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	6e-13
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	6e-13
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	7e-13
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-13
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-13
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	9e-13
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-12
4aoj_A	329	High affinity nerve growth factor receptor; transf	1e-12
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-12
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-12
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-12
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-12
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-12
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	4e-12
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	5e-12
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	1e-11
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	2e-11
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	7e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-11
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	7e-11
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	5e-09
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	2e-08
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	6e-08
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	2e-07
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-07
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	7e-07
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	1e-06
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	5e-06
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	1e-05
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-05
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	3e-05
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	6e-05
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	8e-05
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	8e-05
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	6e-04

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  119 bits (299), Expect = 2e-33
 Identities = 39/152 (25%), Positives = 57/152 (37%), Gaps = 47/152 (30%)

Query: 14  HILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKGT---LSEDTIR 68
            +LK+L   +H+N+V+L   +E    +H  L+MEFC  G L   L        L E    
Sbjct: 59  EVLKKL---NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL 115

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
           I L+ +V       +  L                                IVHR++KP N
Sbjct: 116 IVLRDVVGG-----MNHLRENG----------------------------IVHRNIKPGN 142

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           I+          +      K+ DFG AR L+D
Sbjct: 143 IMRVIG------EDGQSVYKLTDFGAARELED 168

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  114 bits (288), Expect = 1e-31
 Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 46/147 (31%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
             L +L + H + ++ L   + +DQ++Y+VME C   DL  +L  K ++     + + K 
Sbjct: 59  AYLNKL-QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN 116

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           +++A     V  +H                               IVH DLKP N L+  
Sbjct: 117 MLEA-----VHTIHQHG----------------------------IVHSDLKPANFLIVD 143

Query: 134 SFGKQYPQPQHIKLKIADFGFARFLQD 160
                        LK+ DFG A  +Q 
Sbjct: 144 G-----------MLKLIDFGIANQMQP 159

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  113 bits (286), Expect = 1e-31
 Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 46/147 (31%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
             L +L + H + ++ L   + +DQ++Y+VME C   DL  +L  K ++     + + K 
Sbjct: 78  AYLNKL-QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN 135

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           +++A     V  +H                               IVH DLKP N L+  
Sbjct: 136 MLEA-----VHTIHQHG----------------------------IVHSDLKPANFLIVD 162

Query: 134 SFGKQYPQPQHIKLKIADFGFARFLQD 160
                        LK+ DFG A  +Q 
Sbjct: 163 G-----------MLKLIDFGIANQMQP 178

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  114 bits (286), Expect = 4e-31
 Identities = 39/152 (25%), Positives = 57/152 (37%), Gaps = 47/152 (30%)

Query: 14  HILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKGT---LSEDTIR 68
            +LK+L   +H+N+V+L   +E    +H  L+MEFC  G L   L        L E    
Sbjct: 59  EVLKKL---NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL 115

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
           I L+ +V       +  L                                IVHR++KP N
Sbjct: 116 IVLRDVVGG-----MNHLRENG----------------------------IVHRNIKPGN 142

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           I+          +      K+ DFG AR L+D
Sbjct: 143 IMRVIG------EDGQSVYKLTDFGAARELED 168

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  111 bits (278), Expect = 5e-30
 Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 46/147 (31%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
             L +L + H + ++ L   + +DQ++Y+VME C   DL  +L  K ++     + + K 
Sbjct: 106 AYLNKL-QQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKN 163

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           +++A     V  +H                               IVH DLKP N L+  
Sbjct: 164 MLEA-----VHTIHQHG----------------------------IVHSDLKPANFLIVD 190

Query: 134 SFGKQYPQPQHIKLKIADFGFARFLQD 160
                        LK+ DFG A  +Q 
Sbjct: 191 G-----------MLKLIDFGIANQMQP 206

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  106 bits (267), Expect = 5e-29
 Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 39/142 (27%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H N++ L    E+   V L++E  +GG+L D+L  K +L+ED    FLKQI+  +
Sbjct: 62  LREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 121

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                  LH +                             I H DLKP+NI+L     K 
Sbjct: 122 HY-----LHSKR----------------------------IAHFDLKPENIMLLD---KN 145

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
            P P+   +K+ DFG A  ++ 
Sbjct: 146 VPNPR---IKLIDFGIAHKIEA 164

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  106 bits (266), Expect = 1e-28
 Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 39/142 (27%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ H NV+ L    E+   V L++E  +GG+L D+L  K +LSE+    F+KQI+   
Sbjct: 69  LRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG- 127

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               V  LH +                             I H DLKP+NI+L     K 
Sbjct: 128 ----VNYLHTKK----------------------------IAHFDLKPENIMLLD---KN 152

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
            P P    +K+ DFG A  ++D
Sbjct: 153 IPIPH---IKLIDFGLAHEIED 171

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  108 bits (271), Expect = 2e-28
 Identities = 47/156 (30%), Positives = 60/156 (38%), Gaps = 52/156 (33%)

Query: 14  HILKELTELHHENVVELLHCKESDQHV------YLVMEFCNGGDLADYLVSKGT---LSE 64
            I+K+L   +H NVV      +  Q +       L ME+C GGDL  YL        L E
Sbjct: 64  QIMKKL---NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKE 120

Query: 65  DTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDL 124
             IR  L  I  A              +  LH                     RI+HRDL
Sbjct: 121 GPIRTLLSDISSA--------------LRYLHEN-------------------RIIHRDL 147

Query: 125 KPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           KP+NI+L        P PQ +  KI D G+A+ L  
Sbjct: 148 KPENIVLQ-------PGPQRLIHKIIDLGYAKELDQ 176

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  105 bits (264), Expect = 2e-28
 Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 45/146 (30%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           IL++++   H N+++L    E++   +LV +    G+L DYL  K TLSE   R  ++ +
Sbjct: 76  ILRKVSG--HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL 133

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           ++      +  LH  N                            IVHRDLKP+NILL   
Sbjct: 134 LEV-----ICALHKLN----------------------------IVHRDLKPENILLDDD 160

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                       +K+ DFGF+  L  
Sbjct: 161 M----------NIKLTDFGFSCQLDP 176

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  106 bits (266), Expect = 2e-28
 Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 45/146 (30%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           IL+++    H +++ L+   ES   ++LV +    G+L DYL  K  LSE   R  ++ +
Sbjct: 152 ILRQVAG--HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSL 209

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           ++A     V  LH  N                            IVHRDLKP+NILL  +
Sbjct: 210 LEA-----VSFLHANN----------------------------IVHRDLKPENILLDDN 236

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                      +++++DFGF+  L+ 
Sbjct: 237 M----------QIRLSDFGFSCHLEP 252

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  105 bits (264), Expect = 3e-28
 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 43/138 (31%)

Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H++VV      E +  V++V+E C    L +    +  L+E   R +L+QIV      
Sbjct: 98  LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG---- 153

Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                      + LH                     R++HRDLK  N+ L+         
Sbjct: 154 ----------CQYLHRN-------------------RVIHRDLKLGNLFLNE-------- 176

Query: 142 PQHIKLKIADFGFARFLQ 159
              +++KI DFG A  ++
Sbjct: 177 --DLEVKIGDFGLATKVE 192

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  104 bits (261), Expect = 4e-28
 Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 40/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
             +L H N+V L    + +   YLV +   GG+L + +V++   SE      ++QI+++ 
Sbjct: 59  CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES- 117

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               +   H                               IVHR+LKP+N+LL+      
Sbjct: 118 ----IAYCHSNG----------------------------IVHRNLKPENLLLAS----- 140

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             + +   +K+ADFG A  + D
Sbjct: 141 --KAKGAAVKLADFGLAIEVND 160

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  105 bits (265), Expect = 4e-28
 Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 39/142 (27%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ H N++ L    E+   V L++E  +GG+L D+L  K +LSE+    F+KQI+   
Sbjct: 69  LRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG- 127

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               V  LH +                             I H DLKP+NI+L     K 
Sbjct: 128 ----VNYLHTKK----------------------------IAHFDLKPENIMLLD---KN 152

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
            P P    +K+ DFG A  ++D
Sbjct: 153 IPIPH---IKLIDFGLAHEIED 171

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  104 bits (261), Expect = 6e-28
 Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 43/138 (31%)

Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H++VV      E +  V++V+E C    L +    +  L+E   R +L+QIV      
Sbjct: 72  LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLG---- 127

Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                      + LH                     R++HRDLK  N+ L+         
Sbjct: 128 ----------CQYLHRN-------------------RVIHRDLKLGNLFLNE-------- 150

Query: 142 PQHIKLKIADFGFARFLQ 159
              +++KI DFG A  ++
Sbjct: 151 --DLEVKIGDFGLATKVE 166

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  105 bits (263), Expect = 7e-28
 Identities = 34/142 (23%), Positives = 59/142 (41%), Gaps = 40/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
             +L H N+V L    + +   YLV +   GG+L + +V++   SE      ++QI+++ 
Sbjct: 82  CRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES- 140

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               +   H                               IVHR+LKP+N+LL+      
Sbjct: 141 ----IAYCHSNG----------------------------IVHRNLKPENLLLAS----- 163

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             + +   +K+ADFG A  + D
Sbjct: 164 --KAKGAAVKLADFGLAIEVND 183

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  104 bits (261), Expect = 9e-28
 Identities = 43/142 (30%), Positives = 61/142 (42%), Gaps = 39/142 (27%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L E+ H NV+ L    E+   V L++E   GG+L D+L  K +L+E+    FLKQI+   
Sbjct: 68  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNG- 126

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               V  LH                               I H DLKP+NI+L     + 
Sbjct: 127 ----VYYLHSLQ----------------------------IAHFDLKPENIMLLD---RN 151

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
            P+P+   +KI DFG A  +  
Sbjct: 152 VPKPR---IKIIDFGLAHKIDF 170

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  102 bits (257), Expect = 3e-27
 Identities = 38/149 (25%), Positives = 55/149 (36%), Gaps = 44/149 (29%)

Query: 14  HILKEL-TELHHENVVELLHCKESDQHVYLVMEF-CNGGDLADYLVSKGTLSEDTIRIFL 71
            +L ++     H  V+ LL   E+ +   LV+E      DL DY+  KG L E   R F 
Sbjct: 86  ALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF 145

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
            Q+V A              ++  H +                    +VHRD+K +NIL+
Sbjct: 146 GQVVAA--------------IQHCHSR-------------------GVVHRDIKDENILI 172

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
               G           K+ DFG    L D
Sbjct: 173 DLRRG---------CAKLIDFGSGALLHD 192

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  103 bits (259), Expect = 4e-27
 Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 41/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L+H  ++++ +  +  +  Y+V+E   GG+L D +V    L E T +++  Q++ A+
Sbjct: 194 LKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAV 252

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           +      LH                               I+HRDLKP+N+LLS      
Sbjct: 253 QY-----LHENG----------------------------IIHRDLKPENVLLSS----- 274

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             Q +   +KI DFG ++ L +
Sbjct: 275 --QEEDCLIKITDFGHSKILGE 294

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  102 bits (256), Expect = 4e-27
 Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 41/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L+H  ++++ +  +  +  Y+V+E   GG+L D +V    L E T +++  Q++ A 
Sbjct: 69  LKKLNHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA- 126

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               V+ LH                               I+HRDLKP+N+LLS      
Sbjct: 127 ----VQYLHENG----------------------------IIHRDLKPENVLLSS----- 149

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             Q +   +KI DFG ++ L +
Sbjct: 150 --QEEDCLIKITDFGHSKILGE 169

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  100 bits (252), Expect = 8e-27
 Identities = 36/142 (25%), Positives = 51/142 (35%), Gaps = 40/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           +  L H N++ L    E +  +YLVME C GG+L + +V K    E      +K ++ A 
Sbjct: 60  MKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA- 118

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               V   H  N                            + HRDLKP+N L        
Sbjct: 119 ----VAYCHKLN----------------------------VAHRDLKPENFLFLT----- 141

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
                   LK+ DFG A   + 
Sbjct: 142 --DSPDSPLKLIDFGLAARFKP 161

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  101 bits (254), Expect = 8e-27
 Identities = 36/148 (24%), Positives = 58/148 (39%), Gaps = 44/148 (29%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLK 72
           +L+         V+ L    E+   + L++E+  GG++    + +    +SE+ +   +K
Sbjct: 81  VLELAK--SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIK 138

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           QI++      V  LH  N                            IVH DLKPQNILLS
Sbjct: 139 QILEG-----VYYLHQNN----------------------------IVHLDLKPQNILLS 165

Query: 133 HSFGKQYPQPQHIKLKIADFGFARFLQD 160
             +           +KI DFG +R +  
Sbjct: 166 SIYPLG-------DIKIVDFGMSRKIGH 186

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  101 bits (253), Expect = 1e-26
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 46/147 (31%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
            I+K L   +H N+V+L    E+++ +YL+ME+ +GG++ DYLV+ G + E   R   +Q
Sbjct: 66  RIMKIL---NHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQ 122

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           IV A              V+  H K                   RIVHRDLK +N+LL  
Sbjct: 123 IVSA--------------VQYCHQK-------------------RIVHRDLKAENLLLDA 149

Query: 134 SFGKQYPQPQHIKLKIADFGFARFLQD 160
                      + +KIADFGF+     
Sbjct: 150 ----------DMNIKIADFGFSNEFTV 166

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  100 bits (251), Expect = 2e-26
 Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 40/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ HEN+V L    ES  H YLVM+  +GG+L D ++ +G  +E    + ++Q++ A 
Sbjct: 60  LKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSA- 118

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               VK LH                               IVHRDLKP+N+L        
Sbjct: 119 ----VKYLHENG----------------------------IVHRDLKPENLLYLTPE--- 143

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
               ++ K+ I DFG ++  Q+
Sbjct: 144 ----ENSKIMITDFGLSKMEQN 161

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  100 bits (252), Expect = 2e-26
 Identities = 42/142 (29%), Positives = 60/142 (42%), Gaps = 40/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L  L H N+++L    E+   + LV+E   GG+L D +V KG  SE      +KQI++A 
Sbjct: 102 LLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEA- 160

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               V  LH                               IVHRDLKP+N+L +      
Sbjct: 161 ----VAYLHENG----------------------------IVHRDLKPENLLYAT----- 183

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
                   LKIADFG ++ ++ 
Sbjct: 184 --PAPDAPLKIADFGLSKIVEH 203

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  100 bits (251), Expect = 3e-26
 Identities = 36/139 (25%), Positives = 53/139 (38%), Gaps = 39/139 (28%)

Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
             H N++ L    +  ++VY+V E   GG+L D ++ +   SE      L  I +     
Sbjct: 73  GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKT---- 128

Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                     VE LH +                    +VHRDLKP NIL           
Sbjct: 129 ----------VEYLHAQ-------------------GVVHRDLKPSNILYVD------ES 153

Query: 142 PQHIKLKIADFGFARFLQD 160
                ++I DFGFA+ L+ 
Sbjct: 154 GNPESIRICDFGFAKQLRA 172

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 99.6 bits (249), Expect = 5e-26
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 42/143 (29%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQA 77
           L    H N++ L    ES + + ++ EF +G D+ + + +    L+E  I  ++ Q+ +A
Sbjct: 55  LNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEA 114

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
                ++ LH  N                            I H D++P+NI+       
Sbjct: 115 -----LQFLHSHN----------------------------IGHFDIRPENIIYQTRRSS 141

Query: 138 QYPQPQHIKLKIADFGFARFLQD 160
                    +KI +FG AR L+ 
Sbjct: 142 T--------IKIIEFGQARQLKP 156

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  100 bits (252), Expect = 6e-26
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 40/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
              L H N+V L      + H YL+ +   GG+L + +V++   SE      ++QI++A 
Sbjct: 64  CRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA- 122

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               V   H                               +VHR+LKP+N+LL+      
Sbjct: 123 ----VLHCHQMG----------------------------VVHRNLKPENLLLAS----- 145

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             + +   +K+ADFG A  ++ 
Sbjct: 146 --KLKGAAVKLADFGLAIEVEG 165

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  101 bits (252), Expect = 8e-26
 Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 42/143 (29%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQA 77
           ++ L H  +V L    E D  + ++ EF +GG+L + +  +   +SED    +++Q+ + 
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKG 267

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
                +  +H  N                             VH DLKP+NI+ +     
Sbjct: 268 -----LCHMHENN----------------------------YVHLDLKPENIMFTTKRSN 294

Query: 138 QYPQPQHIKLKIADFGFARFLQD 160
           +        LK+ DFG    L  
Sbjct: 295 E--------LKLIDFGLTAHLDP 309

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 98.5 bits (246), Expect = 8e-26
 Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 40/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L H N+++L    E     Y+V E   GG+L D ++ +   SE      +KQ+    
Sbjct: 75  LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG- 133

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               +  +H  N                            IVHRDLKP+NILL       
Sbjct: 134 ----ITYMHKHN----------------------------IVHRDLKPENILLES----- 156

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             + +   +KI DFG +   Q 
Sbjct: 157 --KEKDCDIKIIDFGLSTCFQQ 176

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 99.4 bits (248), Expect = 1e-25
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 42/143 (29%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQA 77
           + +L H N+++L    ES   + LVME+ +GG+L D ++ +   L+E    +F+KQI + 
Sbjct: 140 MNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEG 199

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           ++      +H                               I+H DLKP+NIL  +   K
Sbjct: 200 IRH-----MHQMY----------------------------ILHLDLKPENILCVNRDAK 226

Query: 138 QYPQPQHIKLKIADFGFARFLQD 160
           Q        +KI DFG AR  + 
Sbjct: 227 Q--------IKIIDFGLARRYKP 241

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 98.9 bits (247), Expect = 1e-25
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 44/146 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT----LSEDTIRIFLKQI 74
              L H ++VELL    SD  +Y+V EF +G DL   +V +       SE     +++QI
Sbjct: 80  CHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           ++A     ++  H  N                            I+HRD+KP  +LL+  
Sbjct: 140 LEA-----LRYCHDNN----------------------------IIHRDVKPHCVLLAS- 165

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                 +     +K+  FG A  L +
Sbjct: 166 ------KENSAPVKLGGFGVAIQLGE 185

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 98.5 bits (246), Expect = 1e-25
 Identities = 33/146 (22%), Positives = 54/146 (36%), Gaps = 42/146 (28%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           +L +     H NV+EL+   E +   YLV E   GG +  ++  +   +E    + ++ +
Sbjct: 63  MLYQCQ--GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDV 120

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
             A     +  LH++                             I HRDLKP+NIL  H 
Sbjct: 121 ASA-----LDFLHNKG----------------------------IAHRDLKPENILCEH- 146

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                   Q   +KI DF     ++ 
Sbjct: 147 ------PNQVSPVKICDFDLGSGIKL 166

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 99.8 bits (249), Expect = 1e-25
 Identities = 38/147 (25%), Positives = 51/147 (34%), Gaps = 42/147 (28%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQ 73
           +L+E  E  H NV+     ++  Q  Y+ +E C    L +Y+  K            L+Q
Sbjct: 70  LLRESDE--HPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPITLLQQ 126

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
               L       LH  N                            IVHRDLKP NIL+S 
Sbjct: 127 TTSGLAH-----LHSLN----------------------------IVHRDLKPHNILISM 153

Query: 134 SFGKQYPQPQHIKLKIADFGFARFLQD 160
                      IK  I+DFG  + L  
Sbjct: 154 P-----NAHGKIKAMISDFGLCKKLAV 175

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 97.8 bits (244), Expect = 2e-25
 Identities = 36/165 (21%), Positives = 56/165 (33%), Gaps = 60/165 (36%)

Query: 13  RHILKE---LTELHHENVVELLHC-------------KESDQHVYLVMEFCNGGDLADYL 56
             IL E   L  L+H+ VV                   +    +++ ME+C  G L D +
Sbjct: 47  STILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLI 106

Query: 57  VSKGT-LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD 115
            S+      D      +QI++A     +  +H +                          
Sbjct: 107 HSENLNQQRDEYWRLFRQILEA-----LSYIHSQG------------------------- 136

Query: 116 LARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
              I+HRDLKP NI +  S            +KI DFG A+ +  
Sbjct: 137 ---IIHRDLKPMNIFIDESR----------NVKIGDFGLAKNVHR 168

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 96.9 bits (242), Expect = 2e-25
 Identities = 36/139 (25%), Positives = 53/139 (38%), Gaps = 43/139 (30%)

Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+HENVV+    +      YL +E+C+GG+L D +     + E   + F  Q++      
Sbjct: 62  LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG---- 117

Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                     V  LH                      I HRD+KP+N+LL          
Sbjct: 118 ----------VVYLHGI-------------------GITHRDIKPENLLLDE-------- 140

Query: 142 PQHIKLKIADFGFARFLQD 160
                LKI+DFG A   + 
Sbjct: 141 --RDNLKISDFGLATVFRY 157

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 97.4 bits (243), Expect = 4e-25
 Identities = 39/146 (26%), Positives = 56/146 (38%), Gaps = 42/146 (28%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
            LK      H N+V+L        H +LVME  NGG+L + +  K   SE      ++++
Sbjct: 58  ALKLCE--GHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKL 115

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           V A     V  +H                               +VHRDLKP+N+L +  
Sbjct: 116 VSA-----VSHMHDVG----------------------------VVHRDLKPENLLFTDE 142

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                      ++KI DFGFAR    
Sbjct: 143 NDNL-------EIKIIDFGFARLKPP 161

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 98.7 bits (246), Expect = 4e-25
 Identities = 37/156 (23%), Positives = 59/156 (37%), Gaps = 46/156 (29%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDT-------I 67
           +L E     H NV+     + +D+ +Y+ +E C   +L D + SK    E+         
Sbjct: 61  LLTES--DDHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNP 117

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
              L+QI   +       LH                               I+HRDLKPQ
Sbjct: 118 ISLLRQIASGVAH-----LHSLK----------------------------IIHRDLKPQ 144

Query: 128 NILLS---HSFGKQYPQPQHIKLKIADFGFARFLQD 160
           NIL+S        Q    +++++ I+DFG  + L  
Sbjct: 145 NILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 96.1 bits (240), Expect = 4e-25
 Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 46/147 (31%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
             LK      H ++++L     +    ++VME+ +GG+L DY+   G + E   R   +Q
Sbjct: 63  QNLKLF---RHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ 119

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           I+ A              V+  H                      +VHRDLKP+N+LL  
Sbjct: 120 ILSA--------------VDYCHRH-------------------MVVHRDLKPENVLLDA 146

Query: 134 SFGKQYPQPQHIKLKIADFGFARFLQD 160
                     H+  KIADFG +  + D
Sbjct: 147 ----------HMNAKIADFGLSNMMSD 163

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 97.0 bits (242), Expect = 5e-25
 Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 44/148 (29%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNG-GDLADYLVSKGTLSEDTIRIFLK 72
            +LK+++      V+ LL   E      L++E      DL D++  +G L E+  R F  
Sbjct: 98  VLLKKVSS-GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 156

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           Q+++A              V   H                      ++HRD+K +NIL+ 
Sbjct: 157 QVLEA--------------VRHCHNC-------------------GVLHRDIKDENILID 183

Query: 133 HSFGKQYPQPQHIKLKIADFGFARFLQD 160
            + G         +LK+ DFG    L+D
Sbjct: 184 LNRG---------ELKLIDFGSGALLKD 202

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 97.9 bits (244), Expect = 5e-25
 Identities = 33/143 (23%), Positives = 57/143 (39%), Gaps = 42/143 (29%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQA 77
           + +LHH  ++ L    E    + L++EF +GG+L D + ++   +SE  +  +++Q  + 
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           LK      +H  +                            IVH D+KP+NI+       
Sbjct: 162 LKH-----MHEHS----------------------------IVHLDIKPENIMCETKKAS 188

Query: 138 QYPQPQHIKLKIADFGFARFLQD 160
                    +KI DFG A  L  
Sbjct: 189 S--------VKIIDFGLATKLNP 203

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 96.2 bits (240), Expect = 5e-25
 Identities = 39/147 (26%), Positives = 57/147 (38%), Gaps = 44/147 (29%)

Query: 19  LTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLK 72
           L EL H N+V         ++  +Y+VME+C GGDLA  +      +  L E+ +   + 
Sbjct: 59  LRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           Q+  ALK                H +    H               ++HRDLKP N+ L 
Sbjct: 119 QLTLALKE--------------CHRRSDGGH--------------TVLHRDLKPANVFLD 150

Query: 133 HSFGKQYPQPQHIKLKIADFGFARFLQ 159
                         +K+ DFG AR L 
Sbjct: 151 ----------GKQNVKLGDFGLARILN 167

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score = 96.2 bits (240), Expect = 9e-25
 Identities = 36/139 (25%), Positives = 53/139 (38%), Gaps = 43/139 (30%)

Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L+HENVV+    +      YL +E+C+GG+L D +     + E   + F  Q++      
Sbjct: 62  LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAG---- 117

Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                     V  LH                      I HRD+KP+N+LL          
Sbjct: 118 ----------VVYLHGI-------------------GITHRDIKPENLLLDE-------- 140

Query: 142 PQHIKLKIADFGFARFLQD 160
                LKI+DFG A   + 
Sbjct: 141 --RDNLKISDFGLATVFRY 157

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 96.2 bits (240), Expect = 1e-24
 Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 39/139 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L EL H N++EL      +  ++L+ E+    DL  Y+     +S   I+ FL Q++  +
Sbjct: 87  LKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLINGV 145

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
             F     H                              R +HRDLKPQN+LLS S   +
Sbjct: 146 -NF----CHSR----------------------------RCLHRDLKPQNLLLSVSDASE 172

Query: 139 YPQPQHIKLKIADFGFARF 157
            P      LKI DFG AR 
Sbjct: 173 TPV-----LKIGDFGLARA 186

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 95.9 bits (239), Expect = 2e-24
 Identities = 38/152 (25%), Positives = 60/152 (39%), Gaps = 48/152 (31%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTI 67
               +E   L  + H N+V+     E +  +Y+VM++C GGDL   + +       ED I
Sbjct: 68  EESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI 127

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
             +  QI  ALK               +H +                   +I+HRD+K Q
Sbjct: 128 LDWFVQICLALKH--------------VHDR-------------------KILHRDIKSQ 154

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           NI L+          +   +++ DFG AR L 
Sbjct: 155 NIFLT----------KDGTVQLGDFGIARVLN 176

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 95.6 bits (238), Expect = 2e-24
 Identities = 35/142 (24%), Positives = 47/142 (33%), Gaps = 42/142 (29%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
              L    +V L         V + ME   GG L   +   G L ED    +L Q ++ L
Sbjct: 104 CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGL 163

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                         E LH +                   RI+H D+K  N+LLS   G  
Sbjct: 164 --------------EYLHTR-------------------RILHGDVKADNVLLSSD-G-- 187

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
                  +  + DFG A  LQ 
Sbjct: 188 ------SRAALCDFGHALCLQP 203

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 94.1 bits (235), Expect = 2e-24
 Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 44/135 (32%)

Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKA 80
           L H +++EL +  E   +VYLV+E C+ G++  YL ++    SE+  R F+ QI+     
Sbjct: 68  LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG--- 124

Query: 81  FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYP 140
                      +  LH                      I+HRDL   N+LL+        
Sbjct: 125 -----------MLYLHSH-------------------GILHRDLTLSNLLLTR------- 147

Query: 141 QPQHIKLKIADFGFA 155
              ++ +KIADFG A
Sbjct: 148 ---NMNIKIADFGLA 159

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 95.2 bits (237), Expect = 3e-24
 Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 47/148 (31%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEF-CNGGDLADYLVSKGTLSEDTIRIFLK 72
            IL  +    H N++++L   E+     LVME   +G DL  ++     L E       +
Sbjct: 81  AILSRV---EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           Q+V A              V  L  K                    I+HRD+K +NI+++
Sbjct: 138 QLVSA--------------VGYLRLK-------------------DIIHRDIKDENIVIA 164

Query: 133 HSFGKQYPQPQHIKLKIADFGFARFLQD 160
             F           +K+ DFG A +L+ 
Sbjct: 165 EDF----------TIKLIDFGSAAYLER 182

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 96.3 bits (240), Expect = 3e-24
 Identities = 34/142 (23%), Positives = 57/142 (40%), Gaps = 40/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L H N+++L    E   + YLV E   GG+L D ++S+   SE      ++Q++   
Sbjct: 80  LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG- 138

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               +  +H                               IVHRDLKP+N+LL       
Sbjct: 139 ----ITYMHKNK----------------------------IVHRDLKPENLLLES----- 161

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             + +   ++I DFG +   + 
Sbjct: 162 --KSKDANIRIIDFGLSTHFEA 181

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 96.3 bits (240), Expect = 3e-24
 Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 40/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L  L H N+++L    E  ++ YLV EF  GG+L + ++++    E      +KQI+   
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSG- 158

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               +  LH  N                            IVHRD+KP+NILL +     
Sbjct: 159 ----ICYLHKHN----------------------------IVHRDIKPENILLEN----- 181

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             +   + +KI DFG + F   
Sbjct: 182 --KNSLLNIKIVDFGLSSFFSK 201

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 96.4 bits (240), Expect = 3e-24
 Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 46/147 (31%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
             LK      H ++++L     +   +++VME+ +GG+L DY+   G L E   R   +Q
Sbjct: 68  QNLKLF---RHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQ 124

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           I+                V+  H                      +VHRDLKP+N+LL  
Sbjct: 125 ILSG--------------VDYCHRH-------------------MVVHRDLKPENVLLDA 151

Query: 134 SFGKQYPQPQHIKLKIADFGFARFLQD 160
                     H+  KIADFG +  + D
Sbjct: 152 ----------HMNAKIADFGLSNMMSD 168

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score = 95.1 bits (237), Expect = 4e-24
 Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 41/139 (29%)

Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H N+V       +  H+ ++ME+ +GG+L + + + G  SED  R F +Q++      
Sbjct: 73  LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSG---- 128

Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                     V   H                     +I HRDLK +N LL  S       
Sbjct: 129 ----------VSYCHSM-------------------QICHRDLKLENTLLDGS------- 152

Query: 142 PQHIKLKIADFGFARFLQD 160
               +LKI DFG+++    
Sbjct: 153 -PAPRLKICDFGYSKSSVL 170

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 95.9 bits (239), Expect = 5e-24
 Identities = 37/142 (26%), Positives = 55/142 (38%), Gaps = 40/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L +L H N+++L    E     Y+V E   GG+L D ++ +   SE      +KQ+    
Sbjct: 75  LKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSG- 133

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               +  +H  N                            IVHRDLKP+NILL       
Sbjct: 134 ----ITYMHKHN----------------------------IVHRDLKPENILLES----- 156

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             + +   +KI DFG +   Q 
Sbjct: 157 --KEKDCDIKIIDFGLSTCFQQ 176

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 93.1 bits (232), Expect = 8e-24
 Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 44/146 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----GTLSEDTIRIFLKQI 74
           L  L H N++++    E   ++Y+VME C GG+L + +VS       LSE  +   +KQ+
Sbjct: 74  LKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           + A     +   H ++                            +VH+DLKP+NIL    
Sbjct: 134 MNA-----LAYFHSQH----------------------------VVHKDLKPENILFQD- 159

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                    H  +KI DFG A   + 
Sbjct: 160 ------TSPHSPIKIIDFGLAELFKS 179

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 92.8 bits (231), Expect = 9e-24
 Identities = 31/156 (19%), Positives = 50/156 (32%), Gaps = 48/156 (30%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL----VSKGTLSEDTIRI 69
           +    L    H +VV        D H+ +  E+CNGG LAD +           E  ++ 
Sbjct: 62  YAHAVL--GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKD 119

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            L Q+ + L+      +H  +                            +VH D+KP NI
Sbjct: 120 LLLQVGRGLRY-----IHSMS----------------------------LVHMDIKPSNI 146

Query: 130 LLSHS---------FGKQYPQPQHIKLKIADFGFAR 156
            +S +           +       +  KI D G   
Sbjct: 147 FISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVT 182

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 95.2 bits (237), Expect = 1e-23
 Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 40/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L  L H N+++L    E  ++ YLVME   GG+L D ++ +   +E    + +KQ++   
Sbjct: 90  LKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSG- 148

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
               V  LH  N                            IVHRDLKP+N+LL       
Sbjct: 149 ----VTYLHKHN----------------------------IVHRDLKPENLLLES----- 171

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
             + +   +KI DFG +   ++
Sbjct: 172 --KEKDALIKIVDFGLSAVFEN 191

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 91.9 bits (229), Expect = 2e-23
 Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 49/162 (30%)

Query: 5   SKSSIV---LTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS 58
            K+ +    +   + +E    + L H N++ L         VYL++E+   G +   L  
Sbjct: 43  FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 102

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
                E     ++ ++  AL                 H K                   R
Sbjct: 103 LSKFDEQRTATYITELANAL--------------SYCHSK-------------------R 129

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ++HRD+KP+N+LL              +LKIADFG++     
Sbjct: 130 VIHRDIKPENLLLGS----------AGELKIADFGWSVHAPS 161

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 91.5 bits (228), Expect = 4e-23
 Identities = 34/141 (24%), Positives = 56/141 (39%), Gaps = 45/141 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKQIVQA 77
           L +L H N+V LL      + ++LV E+C+   +   L   +  + E  ++    Q +QA
Sbjct: 56  LKQLKHPNLVNLLEVFRRKRRLHLVFEYCD-HTVLHELDRYQRGVPEHLVKSITWQTLQA 114

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           +                               FC+       +HRD+KP+NIL++     
Sbjct: 115 V------------------------------NFCHK---HNCIHRDVKPENILITKH-S- 139

Query: 138 QYPQPQHIKLKIADFGFARFL 158
                    +K+ DFGFAR L
Sbjct: 140 --------VIKLCDFGFARLL 152

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 91.6 bits (228), Expect = 4e-23
 Identities = 32/147 (21%), Positives = 45/147 (30%), Gaps = 47/147 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFL 71
               +++    H   V L    E    +YL  E C G  L  +  + G  L E  +  +L
Sbjct: 107 VGSHEKV--GQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYL 163

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
           +  + AL       LH +                             +VH D+KP NI L
Sbjct: 164 RDTLLALAH-----LHSQG----------------------------LVHLDVKPANIFL 190

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFL 158
                         KL   DFG    L
Sbjct: 191 GPR--------GRCKL--GDFGLLVEL 207

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 92.2 bits (229), Expect = 4e-23
 Identities = 34/154 (22%), Positives = 61/154 (39%), Gaps = 25/154 (16%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           + +LHH N+  L    E +Q++ LVME C+GG L D L      S     + + +     
Sbjct: 82  MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141

Query: 79  KAFQVKELHHENVVELLHCK-----ESD-----QHVYLVMEFC--NGGDLARIVHRDLKP 126
                +E  + ++            E       + ++  + +    G     I HRD+KP
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQG-----ICHRDIKP 196

Query: 127 QNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +N L S          +  ++K+ DFG ++    
Sbjct: 197 ENFLFST--------NKSFEIKLVDFGLSKEFYK 222

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 91.2 bits (227), Expect = 5e-23
 Identities = 32/154 (20%), Positives = 59/154 (38%), Gaps = 50/154 (32%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS----KGTLSED 65
              +KE   L +L+H NV++       D  + +V+E  + GDL+  +      K  + E 
Sbjct: 77  ADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPER 136

Query: 66  TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLK 125
           T+  +  Q+  AL+               +H +                   R++HRD+K
Sbjct: 137 TVWKYFVQLCSALEH--------------MHSR-------------------RVMHRDIK 163

Query: 126 PQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           P N+ ++ +            +K+ D G  RF  
Sbjct: 164 PANVFITATG----------VVKLGDLGLGRFFS 187

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 90.3 bits (225), Expect = 9e-23
 Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 45/140 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQA 77
           L EL H+N+V L     SD+ + LV EFC+  DL  Y  S    L  + ++ FL Q+++ 
Sbjct: 55  LKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQLLKG 113

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L  F     H                               ++HRDLKPQN+L++ + G 
Sbjct: 114 L-GF----CHSR----------------------------NVLHRDLKPQNLLINRN-G- 138

Query: 138 QYPQPQHIKLKIADFGFARF 157
                   +LK+A+FG AR 
Sbjct: 139 --------ELKLANFGLARA 150

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 90.7 bits (226), Expect = 1e-22
 Identities = 43/149 (28%), Positives = 63/149 (42%), Gaps = 51/149 (34%)

Query: 15  ILKELTELHHENVVELL-----HCKESDQHVYLVMEFCNGGDLADYL--VSKGTLSEDTI 67
           +L+ L    H NVV L         + +  + LV E  +  DL  YL  V +  +  +TI
Sbjct: 64  VLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPTETI 122

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
           +  + Q+++ L  F             LH                     R+VHRDLKPQ
Sbjct: 123 KDMMFQLLRGL-DF-------------LHSH-------------------RVVHRDLKPQ 149

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           NIL++ S G         ++K+ADFG AR
Sbjct: 150 NILVTSS-G---------QIKLADFGLAR 168

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ... Length = 299

 Score = 90.3 bits (225), Expect = 1e-22
 Identities = 41/140 (29%), Positives = 63/140 (45%), Gaps = 46/140 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKQIVQ 76
           L EL+H N+V+LL    ++  +YLV EF +  DL  ++ +     +    I+ +L Q++Q
Sbjct: 56  LKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQ 114

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            L AF     H                              R++HRDLKPQN+L++   G
Sbjct: 115 GL-AF----CHSH----------------------------RVLHRDLKPQNLLINTE-G 140

Query: 137 KQYPQPQHIKLKIADFGFAR 156
                     +K+ADFG AR
Sbjct: 141 ---------AIKLADFGLAR 151

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 90.7 bits (226), Expect = 1e-22
 Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 45/141 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKQIVQA 77
           L +L HEN+V LL   +  +  YLV EF +   + D L +    L    ++ +L QI+  
Sbjct: 78  LKQLRHENLVNLLEVCKKKKRWYLVFEFVD-HTILDDLELFPNGLDYQVVQKYLFQIING 136

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           +                               FC+      I+HRD+KP+NIL+S S G 
Sbjct: 137 I------------------------------GFCHS---HNIIHRDIKPENILVSQS-G- 161

Query: 138 QYPQPQHIKLKIADFGFARFL 158
                    +K+ DFGFAR L
Sbjct: 162 --------VVKLCDFGFARTL 174

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 90.4 bits (225), Expect = 2e-22
 Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 44/139 (31%)

Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           L H ++++L     +   + +V+E+  GG+L DY+V K  ++ED  R F +QI+ A    
Sbjct: 66  LRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICA---- 120

Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                     +E  H                     +IVHRDLKP+N+LL          
Sbjct: 121 ----------IEYCHRH-------------------KIVHRDLKPENLLLDD-------- 143

Query: 142 PQHIKLKIADFGFARFLQD 160
             ++ +KIADFG +  + D
Sbjct: 144 --NLNVKIADFGLSNIMTD 160

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 89.6 bits (223), Expect = 2e-22
 Identities = 42/150 (28%), Positives = 60/150 (40%), Gaps = 51/150 (34%)

Query: 15  ILKELTELHHENVVELL---HCKESDQH--VYLVMEFCNGGDLADYLVSKGT--LSEDTI 67
           +L+ L    H NVV L+       +D+   V LV E  +  DL  YL       L  +TI
Sbjct: 64  LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETI 122

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
           +  ++Q ++ L              + LH                      IVHRDLKP+
Sbjct: 123 KDLMRQFLRGL--------------DFLHAN-------------------CIVHRDLKPE 149

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARF 157
           NIL++   G          +K+ADFG AR 
Sbjct: 150 NILVTSG-G---------TVKLADFGLARI 169

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 89.5 bits (223), Expect = 3e-22
 Identities = 44/140 (31%), Positives = 61/140 (43%), Gaps = 45/140 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQA 77
           L ELHH N+V L+    S++ + LV EF    DL   L    T L +  I+I+L Q+++ 
Sbjct: 73  LKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRG 131

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           + A      H                              RI+HRDLKPQN+L++   G 
Sbjct: 132 V-AH----CHQH----------------------------RILHRDLKPQNLLINSD-G- 156

Query: 138 QYPQPQHIKLKIADFGFARF 157
                    LK+ADFG AR 
Sbjct: 157 --------ALKLADFGLARA 168

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 88.7 bits (221), Expect = 3e-22
 Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 45/139 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQA 77
           L EL H N+V+L     + + + LV E  +  DL   L      L   T + FL Q++  
Sbjct: 54  LKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQLLNG 112

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           + A+     H                              R++HRDLKPQN+L++   G 
Sbjct: 113 I-AY----CHDR----------------------------RVLHRDLKPQNLLINRE-G- 137

Query: 138 QYPQPQHIKLKIADFGFAR 156
                   +LKIADFG AR
Sbjct: 138 --------ELKIADFGLAR 148

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 88.8 bits (221), Expect = 3e-22
 Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 49/157 (31%)

Query: 5   SKSSIV---LTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS 58
            KS +    +   + +E    + L H N++ + +     + +YL++EF   G+L   L  
Sbjct: 48  FKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQK 107

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
            G   E     F++++  AL                 H +                   +
Sbjct: 108 HGRFDEQRSATFMEELADAL--------------HYCHER-------------------K 134

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           ++HRD+KP+N+L+ +            +LKIADFG++
Sbjct: 135 VIHRDIKPENLLMGY----------KGELKIADFGWS 161

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 88.1 bits (219), Expect = 5e-22
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 61/160 (38%)

Query: 19  LTELHHENVVELLHC----------------KESDQHVYLVMEFCNGGDLADYLVSK--G 60
           L +L H N+V    C                +   + +++ MEFC+ G L  ++  +   
Sbjct: 58  LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117

Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
            L +       +QI + +                +H K                   +++
Sbjct: 118 KLDKVLALELFEQITKGVDY--------------IHSK-------------------KLI 144

Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +RDLKP NI L  +           ++KI DFG    L++
Sbjct: 145 NRDLKPSNIFLVDTK----------QVKIGDFGLVTSLKN 174

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 89.0 bits (221), Expect = 6e-22
 Identities = 23/156 (14%), Positives = 52/156 (33%), Gaps = 53/156 (33%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL--------SE 64
             I+ ++    +E  +       +   VY++ E+     +  +      L          
Sbjct: 94  LQIITDI---KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150

Query: 65  DTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDL 124
             I+  +K ++ +                 +H ++                   I HRD+
Sbjct: 151 QVIKCIIKSVLNS--------------FSYIHNEK------------------NICHRDV 178

Query: 125 KPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           KP NIL+            + ++K++DFG + ++ D
Sbjct: 179 KPSNILMDK----------NGRVKLSDFGESEYMVD 204

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 88.1 bits (219), Expect = 7e-22
 Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 49/149 (32%)

Query: 14  HILKELTELHHENVVELLHCKE--SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
            ILK+L    H NVV+L+   +  ++ H+Y+V E  N G + +   +   LSED  R + 
Sbjct: 88  AILKKL---DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEV-PTLKPLSEDQARFYF 143

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
           + +++               +E LH +                   +I+HRD+KP N+L+
Sbjct: 144 QDLIKG--------------IEYLHYQ-------------------KIIHRDIKPSNLLV 170

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
                          +KIADFG +   + 
Sbjct: 171 GEDG----------HIKIADFGVSNEFKG 189

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 87.8 bits (218), Expect = 1e-21
 Identities = 29/146 (19%), Positives = 46/146 (31%), Gaps = 51/146 (34%)

Query: 22  LHHENVVELLHC----KESDQHVYLVMEFCNGGDLADYL----VSKGTLSEDTIRIFLKQ 73
            +H N++ L+      + +    +L++ F   G L + +         L+ED I   L  
Sbjct: 83  FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
           I + L+A              +H K                      HRDLKP NILL  
Sbjct: 143 ICRGLEA--------------IHAK-------------------GYAHRDLKPTNILLGD 169

Query: 134 SFGKQYPQPQHIKLKIADFGFARFLQ 159
                       +  + D G      
Sbjct: 170 EG----------QPVLMDLGSMNQAC 185

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 87.7 bits (218), Expect = 1e-21
 Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 45/140 (32%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQA 77
           L +L H N+V L     +++ + LV E+ +  DL  YL   G  ++   +++FL Q+++ 
Sbjct: 54  LKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRG 112

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L A+     H                              +++HRDLKPQN+L++   G 
Sbjct: 113 L-AY----CHR----------------------------QKVLHRDLKPQNLLINER-G- 137

Query: 138 QYPQPQHIKLKIADFGFARF 157
                   +LK+ADFG AR 
Sbjct: 138 --------ELKLADFGLARA 149

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 87.6 bits (218), Expect = 2e-21
 Identities = 35/141 (24%), Positives = 55/141 (39%), Gaps = 47/141 (33%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQA 77
           L EL H N++ LL       ++ LV +F    DL   +      L+   I+ ++   +Q 
Sbjct: 66  LQELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQG 124

Query: 78  LKAFQVKELH-HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
           L+       + H++                            I+HRDLKP N+LL  + G
Sbjct: 125 LE-------YLHQH---------------------------WILHRDLKPNNLLLDEN-G 149

Query: 137 KQYPQPQHIKLKIADFGFARF 157
                     LK+ADFG A+ 
Sbjct: 150 ---------VLKLADFGLAKS 161

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 87.3 bits (217), Expect = 2e-21
 Identities = 38/145 (26%), Positives = 58/145 (40%), Gaps = 50/145 (34%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL------VSKGTLSEDTIRIFLK 72
           + EL HEN+V L     ++  + LV EF +  DL  Y+       +   L  + ++ F  
Sbjct: 57  MKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQW 115

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           Q++Q L                 H                     +I+HRDLKPQN+L++
Sbjct: 116 QLLQGL--------------AFCHEN-------------------KILHRDLKPQNLLIN 142

Query: 133 HSFGKQYPQPQHIKLKIADFGFARF 157
              G         +LK+ DFG AR 
Sbjct: 143 KR-G---------QLKLGDFGLARA 157

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 87.5 bits (217), Expect = 3e-21
 Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 48/152 (31%)

Query: 15  ILKELTELHHENVVELLHCKE----SDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIR 68
           +          ++V ++   E      + + +VME  +GG+L   +  +G    +E    
Sbjct: 107 LHWRA--SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 164

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             +K I +A     ++ LH  N                            I HRD+KP+N
Sbjct: 165 EIMKSIGEA-----IQYLHSIN----------------------------IAHRDVKPEN 191

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +L +           +  LK+ DFGFA+    
Sbjct: 192 LLYTSKR-------PNAILKLTDFGFAKETTS 216

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 85.8 bits (213), Expect = 6e-21
 Identities = 34/151 (22%), Positives = 57/151 (37%), Gaps = 51/151 (33%)

Query: 14  HILKELTELHHENVVELLH--CKESDQHVYLVMEFCNGG--DLADYLVSKGTLSEDTIRI 69
            +L+ L    H+NV++L+     E  Q +Y+VME+C  G  ++ D +  +          
Sbjct: 58  QLLRRL---RHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP-EKRFPVCQAHG 113

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           +  Q++                +E LH +                    IVH+D+KP N+
Sbjct: 114 YFCQLIDG--------------LEYLHSQ-------------------GIVHKDIKPGNL 140

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LL+              LKI+  G A  L  
Sbjct: 141 LLTT----------GGTLKISALGVAEALHP 161

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 84.6 bits (210), Expect = 1e-20
 Identities = 45/141 (31%), Positives = 63/141 (44%), Gaps = 43/141 (30%)

Query: 20  TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALK 79
           ++L H+N+V ++   E D   YLVME+  G  L++Y+ S G LS DT   F  QI+  +K
Sbjct: 66  SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIK 125

Query: 80  AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY 139
                   H+                            RIVHRD+KPQNIL+  +     
Sbjct: 126 H------AHDM---------------------------RIVHRDIKPQNILIDSN-K--- 148

Query: 140 PQPQHIKLKIADFGFARFLQD 160
                  LKI DFG A+ L +
Sbjct: 149 ------TLKIFDFGIAKALSE 163

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 85.4 bits (211), Expect = 2e-20
 Identities = 22/155 (14%), Positives = 49/155 (31%), Gaps = 39/155 (25%)

Query: 11  LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-----TLSED 65
           +   +++ L        ++            LV E  + G L + +          + + 
Sbjct: 113 IGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQG 172

Query: 66  TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLK 125
            +  F  +++                +E +H  E                   I+H D+K
Sbjct: 173 LVISFAMRMLYM--------------IEQVHDCE-------------------IIHGDIK 199

Query: 126 PQNILLSHSFGKQYPQP-QHIKLKIADFGFARFLQ 159
           P N +L + F +Q  +      L + D G +  ++
Sbjct: 200 PDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMK 234

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 84.2 bits (209), Expect = 2e-20
 Identities = 42/162 (25%), Positives = 64/162 (39%), Gaps = 49/162 (30%)

Query: 5   SKSSIVL---TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS 58
            K  I+      ++ +E   ++ L H   V+L    + D+ +Y  + +   G+L  Y+  
Sbjct: 64  EKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK 123

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
            G+  E   R +  +IV AL              E LH K                    
Sbjct: 124 IGSFDETCTRFYTAEIVSAL--------------EYLHGKG------------------- 150

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           I+HRDLKP+NILL+           HI  +I DFG A+ L  
Sbjct: 151 IIHRDLKPENILLNEDM--------HI--QITDFGTAKVLSP 182

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 84.8 bits (210), Expect = 3e-20
 Identities = 37/153 (24%), Positives = 56/153 (36%), Gaps = 51/153 (33%)

Query: 19  LTELHHENVVELL--HCKESDQHVYLVMEFCNGGDLADYLVSKGT---------LSEDTI 67
           L EL H NV+ L       +D+ V+L+ ++    DL   +              L    +
Sbjct: 72  LRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMV 130

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
           +  L QI+  +        H+      LH                      ++HRDLKP 
Sbjct: 131 KSLLYQILDGI--------HY------LHAN-------------------WVLHRDLKPA 157

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           NIL+          P+  ++KIAD GFAR    
Sbjct: 158 NILVMGE------GPERGRVKIADMGFARLFNS 184

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 83.5 bits (207), Expect = 3e-20
 Identities = 31/147 (21%), Positives = 53/147 (36%), Gaps = 48/147 (32%)

Query: 15  ILKELTELHHENVVELLHCKE----SDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIR 68
           +          ++V ++   E      + + +VME  +GG+L   +  +G    +E    
Sbjct: 63  LHWRA--SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREAS 120

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             +K I +A     ++ LH  N                            I HRD+KP+N
Sbjct: 121 EIMKSIGEA-----IQYLHSIN----------------------------IAHRDVKPEN 147

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFA 155
           +L +              LK+ DFGFA
Sbjct: 148 LLYTSKRPNA-------ILKLTDFGFA 167

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 83.9 bits (208), Expect = 4e-20
 Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 48/152 (31%)

Query: 15  ILKELTELHHENVVELLHCKESDQH----VYLVMEFCNGGDLADYLVSKG--TLSEDTIR 68
              +       ++V +L   E+  H    + ++ME   GG+L   +  +G    +E    
Sbjct: 74  HHWQA--SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAA 131

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             ++ I  A     ++ LH  N                            I HRD+KP+N
Sbjct: 132 EIMRDIGTA-----IQFLHSHN----------------------------IAHRDVKPEN 158

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +L +        + +   LK+ DFGFA+    
Sbjct: 159 LLYTS-------KEKDAVLKLTDFGFAKETTQ 183

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 84.4 bits (209), Expect = 5e-20
 Identities = 34/153 (22%), Positives = 61/153 (39%), Gaps = 53/153 (34%)

Query: 16  LKELTELHHENVVELLHC------KESDQHVYLVMEFCNGGDL----ADYLVSKGTLSED 65
           L+ + +L H N+V L +       K+ + ++ LV+++     +      Y  +K TL   
Sbjct: 98  LQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV-PETVYRVARHYSRAKQTLPVI 156

Query: 66  TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLK 125
            +++++ Q+ ++L                +H                      I HRD+K
Sbjct: 157 YVKLYMYQLFRSLAY--------------IHS-------------------FGICHRDIK 183

Query: 126 PQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           PQN+LL          P    LK+ DFG A+ L
Sbjct: 184 PQNLLLD---------PDTAVLKLCDFGSAKQL 207

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 83.2 bits (206), Expect = 5e-20
 Identities = 28/157 (17%), Positives = 49/157 (31%), Gaps = 58/157 (36%)

Query: 19  LTELHHENVVELLHC------------KESDQHVYLVMEFCNGGDLADYLVSKGTLS--- 63
           L +L H  +V   +                  ++Y+ M+ C   +L D++  + T+    
Sbjct: 57  LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERE 116

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
                    QI +A++               LH K                    ++HRD
Sbjct: 117 RSVCLHIFLQIAEAVEF--------------LHSK-------------------GLMHRD 143

Query: 124 LKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LKP NI  +              +K+ DFG    +  
Sbjct: 144 LKPSNIFFT----------MDDVVKVGDFGLVTAMDQ 170

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 83.5 bits (207), Expect = 6e-20
 Identities = 39/162 (24%), Positives = 68/162 (41%), Gaps = 49/162 (30%)

Query: 5   SKSSIVLTR---HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS 58
            K  +V  +   H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L  
Sbjct: 75  DKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR 134

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
            G  SE   R +  QIV                 E LH  +                   
Sbjct: 135 IGRFSEPHARFYAAQIVLTF--------------EYLHSLD------------------- 161

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +++RDLKP+N+L+    G       +I++   DFGFA+ ++ 
Sbjct: 162 LIYRDLKPENLLIDQ-QG-------YIQV--TDFGFAKRVKG 193

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 81.9 bits (203), Expect = 1e-19
 Identities = 39/142 (27%), Positives = 53/142 (37%), Gaps = 33/142 (23%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
              L H N++ L      + ++ LVMEF  GG L   L  K  +  D +  +  QI    
Sbjct: 60  FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGK-RIPPDILVNWAVQI---- 114

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
            A  +  LH E +V                          I+HRDLK  NIL+      +
Sbjct: 115 -ARGMNYLHDEAIV-------------------------PIIHRDLKSSNILILQKV--E 146

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
                +  LKI DFG AR    
Sbjct: 147 NGDLSNKILKITDFGLAREWHR 168

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 82.0 bits (203), Expect = 1e-19
 Identities = 32/146 (21%), Positives = 48/146 (32%), Gaps = 44/146 (30%)

Query: 19  LTELHHENVVELLHC----KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           L  L H N+V          +  + + LV E    G L  YL     +    +R + +QI
Sbjct: 79  LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQI 138

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           ++ L+      LH                               I+HRDLK  NI ++  
Sbjct: 139 LKGLQF-----LHTRT--------------------------PPIIHRDLKCDNIFITGP 167

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
            G          +KI D G A   + 
Sbjct: 168 TG---------SVKIGDLGLATLKRA 184

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 82.8 bits (205), Expect = 1e-19
 Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 53/153 (34%)

Query: 16  LKELTELHHENVVELLHC------KESDQHVYLVMEFCNGGDL----ADYLVSKGTLSED 65
           L+ +  + H NVV+L         K+ +  + LV+E+     +      Y   K T+   
Sbjct: 83  LQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYV-PETVYRASRHYAKLKQTMPML 141

Query: 66  TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLK 125
            I++++ Q++++L                +H                      I HRD+K
Sbjct: 142 LIKLYMYQLLRSLAY--------------IHS-------------------IGICHRDIK 168

Query: 126 PQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           PQN+LL          P    LK+ DFG A+ L
Sbjct: 169 PQNLLLD---------PPSGVLKLIDFGSAKIL 192

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 81.2 bits (201), Expect = 2e-19
 Identities = 39/145 (26%), Positives = 57/145 (39%), Gaps = 45/145 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG---TLSEDTIRIFLKQIV 75
              L H+N+V+ L     +  + + ME   GG L+  L SK      +E TI  + KQI+
Sbjct: 73  HKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQIL 132

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           + L     K LH                               IVHRD+K  N+L++   
Sbjct: 133 EGL-----KYLHDNQ----------------------------IVHRDIKGDNVLINTYS 159

Query: 136 GKQYPQPQHIKLKIADFGFARFLQD 160
           G          LKI+DFG ++ L  
Sbjct: 160 G---------VLKISDFGTSKRLAG 175

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 82.6 bits (204), Expect = 3e-19
 Identities = 37/158 (23%), Positives = 61/158 (38%), Gaps = 52/158 (32%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLH-----CKESDQHVYLVMEFCNGGDLADYLVS 58
             ++  + IL+E   L  L+H++VV++L        E    +Y+V+E     D      +
Sbjct: 91  EDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRT 149

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
              L+E  I+  L  ++  +K               +H                    A 
Sbjct: 150 PVYLTELHIKTLLYNLLVGVKY--------------VHS-------------------AG 176

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           I+HRDLKP N L++          Q   +K+ DFG AR
Sbjct: 177 ILHRDLKPANCLVN----------QDCSVKVCDFGLAR 204

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 81.7 bits (202), Expect = 4e-19
 Identities = 39/157 (24%), Positives = 64/157 (40%), Gaps = 50/157 (31%)

Query: 5   SKSSIVL---TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS 58
           SK  ++    +    +E   +   +   VV+L +  + D+++Y+VME+  GGDL + + S
Sbjct: 103 SKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM-S 161

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
              + E   R +  ++V AL A     +H                               
Sbjct: 162 NYDVPEKWARFYTAEVVLALDA-----IHSMG---------------------------- 188

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
            +HRD+KP N+LL    G       H+KL  ADFG  
Sbjct: 189 FIHRDVKPDNMLL-DKSG-------HLKL--ADFGTC 215

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 80.6 bits (199), Expect = 6e-19
 Identities = 34/157 (21%), Positives = 59/157 (37%), Gaps = 55/157 (35%)

Query: 15  ILKELTELHHENVVELLHCKESDQH--------VYLVMEFCNGGDLADYLV---SKGTLS 63
            +K+L+   H N+V+        +           L+ E C G  + ++L    S+G LS
Sbjct: 78  FMKKLS--GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLV-EFLKKMESRGPLS 134

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
            DT+     Q  +A++               +H ++                   I+HRD
Sbjct: 135 CDTVLKIFYQTCRAVQH--------------MHRQKP-----------------PIIHRD 163

Query: 124 LKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LK +N+LLS+             +K+ DFG A  +  
Sbjct: 164 LKVENLLLSNQG----------TIKLCDFGSATTISH 190

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 80.0 bits (198), Expect = 8e-19
 Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 47/145 (32%)

Query: 20  TELHHENVVELL----HCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
             L+H  +V +         +    Y+VME+ +G  L D + ++G ++       +    
Sbjct: 67  AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
           QAL         H+N                            I+HRD+KP NI++S + 
Sbjct: 127 QALNF------SHQN---------------------------GIIHRDVKPANIMISAT- 152

Query: 136 GKQYPQPQHIKLKIADFGFARFLQD 160
                      +K+ DFG AR + D
Sbjct: 153 N---------AVKVMDFGIARAIAD 168

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 79.1 bits (196), Expect = 2e-18
 Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 49/162 (30%)

Query: 5   SKSSIVLTR---HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS 58
            K  +V  +   H   E   L+ + H  ++ +    +  Q ++++M++  GG+L   L  
Sbjct: 40  KKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK 99

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
                    + +  ++  AL              E LH K+                   
Sbjct: 100 SQRFPNPVAKFYAAEVCLAL--------------EYLHSKD------------------- 126

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           I++RDLKP+NILL  + G       HI  KI DFGFA+++ D
Sbjct: 127 IIYRDLKPENILLDKN-G-------HI--KITDFGFAKYVPD 158

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 79.6 bits (197), Expect = 2e-18
 Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 52/155 (33%)

Query: 15  ILKELTELHHENVVELLHC-------KESDQHVYLVMEFCNGGDL----ADYLVSKGTLS 63
           I+++L  LHH N+V+L             D ++ +VME+     L     +Y   +    
Sbjct: 69  IMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYV-PDTLHRCCRNYYRRQVAPP 127

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
              I++FL Q+++++       LH  +                            + HRD
Sbjct: 128 PILIKVFLFQLIRSIGC-----LHLPS--------------------------VNVCHRD 156

Query: 124 LKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           +KP N+L++ + G          LK+ DFG A+ L
Sbjct: 157 IKPHNVLVNEADG---------TLKLCDFGSAKKL 182

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 79.2 bits (196), Expect = 2e-18
 Identities = 32/145 (22%), Positives = 53/145 (36%), Gaps = 49/145 (33%)

Query: 15  ILKELTELHHENVVELLHCKESDQH--VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           IL+ L      N++ L    +        LV E  N  D         TL++  IR ++ 
Sbjct: 83  ILENLR--GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMY 137

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I++AL                               +C+      I+HRD+KP N+++ 
Sbjct: 138 EILKALD------------------------------YCHS---MGIMHRDVKPHNVMID 164

Query: 133 HSFGKQYPQPQHIKLKIADFGFARF 157
           H            KL++ D+G A F
Sbjct: 165 HEHR---------KLRLIDWGLAEF 180

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 78.5 bits (194), Expect = 2e-18
 Identities = 30/144 (20%), Positives = 50/144 (34%), Gaps = 41/144 (28%)

Query: 19  LTELHHENVVELL-HCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQ 76
           ++ L+H N+V+L            +VMEF   GDL   L+ K   +        +  I  
Sbjct: 77  MSNLNHPNIVKLYGLMHNP---PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIAL 133

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            +  +    + ++N                            IVHRDL+  NI L     
Sbjct: 134 GI-EY----MQNQNPP--------------------------IVHRDLRSPNIFLQ---- 158

Query: 137 KQYPQPQHIKLKIADFGFARFLQD 160
               +   +  K+ADFG ++    
Sbjct: 159 -SLDENAPVCAKVADFGLSQQSVH 181

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 78.8 bits (195), Expect = 2e-18
 Identities = 37/142 (26%), Positives = 50/142 (35%), Gaps = 45/142 (31%)

Query: 20  TELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRIFLKQIVQAL 78
             L   +VV +    E D  +Y+ M   NG DLA  L  +G L+    + I ++QI  AL
Sbjct: 89  GRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAI-VRQIGSAL 147

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
            A       H                            A   HRD+KP+NIL+S      
Sbjct: 148 DA------AHA---------------------------AGATHRDVKPENILVSAD-D-- 171

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
                     + DFG A    D
Sbjct: 172 -------FAYLVDFGIASATTD 186

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 78.2 bits (193), Expect = 4e-18
 Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 46/152 (30%)

Query: 13  RHILKELTELH----HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIR 68
           + IL +L  +        +V+      ++  V++ ME             +G + E  + 
Sbjct: 68  KRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILG 127

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
                IV+AL       L  ++                            ++HRD+KP N
Sbjct: 128 KMTVAIVKAL-----YYLKEKH---------------------------GVIHRDVKPSN 155

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ILL    G         ++K+ DFG +  L D
Sbjct: 156 ILLDER-G---------QIKLCDFGISGRLVD 177

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 78.4 bits (194), Expect = 4e-18
 Identities = 38/148 (25%), Positives = 57/148 (38%), Gaps = 53/148 (35%)

Query: 19  LTELHHENVVELL---HCKESDQH-----VYLVMEFCNGGDLADYLVSKGT-LSEDTIRI 69
           L  L HENVV L+     K S  +     +YLV +FC   DLA  L +     +   I+ 
Sbjct: 70  LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKR 128

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            ++ ++  L                +H                     +I+HRD+K  N+
Sbjct: 129 VMQMLLNGL--------------YYIHRN-------------------KILHRDMKAANV 155

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARF 157
           L++   G          LK+ADFG AR 
Sbjct: 156 LITRD-G---------VLKLADFGLARA 173

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 77.4 bits (191), Expect = 7e-18
 Identities = 37/142 (26%), Positives = 51/142 (35%), Gaps = 38/142 (26%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L+ ++H N+V+L         V LVME+  GG L + L     L   T    +   +Q  
Sbjct: 55  LSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQC- 111

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
            +  V  LH                               ++HRDLKP N+LL       
Sbjct: 112 -SQGVAYLHSMQPK-------------------------ALIHRDLKPPNLLLVAGGT-- 143

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
                   LKI DFG A  +Q 
Sbjct: 144 -------VLKICDFGTACDIQT 158

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 77.8 bits (192), Expect = 1e-17
 Identities = 39/158 (24%), Positives = 59/158 (37%), Gaps = 50/158 (31%)

Query: 5   SKSSIVL---TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS 58
           +K  ++         +E   L       + +L    + + ++YLVME+  GGDL   L  
Sbjct: 95  NKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK 154

Query: 59  KGT-LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
            G  +  +  R +L +IV A+ +     +H                              
Sbjct: 155 FGERIPAEMARFYLAEIVMAIDS-----VHRLG--------------------------- 182

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
             VHRD+KP NILL    G       HI+L  ADFG  
Sbjct: 183 -YVHRDIKPDNILLDRC-G-------HIRL--ADFGSC 209

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 76.6 bits (189), Expect = 2e-17
 Identities = 27/146 (18%), Positives = 49/146 (33%), Gaps = 46/146 (31%)

Query: 19  LTELHHENVVELL-HCKESDQHVYLVMEFCNGGDLADYL---VSKGTLSEDTIRIFLKQI 74
           +  L H N+V  +    +   ++ +V E+ + G L   L    ++  L E         +
Sbjct: 88  MKRLRHPNIVLFMGAVTQPP-NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDV 146

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
            + +       LH+ N                            IVHR+LK  N+L+   
Sbjct: 147 AKGMN-----YLHNRNPP--------------------------IVHRNLKSPNLLVD-- 173

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                   +   +K+ DFG +R    
Sbjct: 174 --------KKYTVKVCDFGLSRLKAS 191

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 76.8 bits (189), Expect = 2e-17
 Identities = 34/151 (22%), Positives = 56/151 (37%), Gaps = 45/151 (29%)

Query: 13  RHILKELTELH---HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
             I++EL  LH      +V       SD  + + ME  +GG L   L   G + E  +  
Sbjct: 76  NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 135

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
               +++ L       L  ++                           +I+HRD+KP NI
Sbjct: 136 VSIAVIKGLT-----YLREKH---------------------------KIMHRDVKPSNI 163

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L++   G         ++K+ DFG +  L D
Sbjct: 164 LVNSR-G---------EIKLCDFGVSGQLID 184

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 75.8 bits (187), Expect = 3e-17
 Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 47/144 (32%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
           I+ E   + E  + N+V  L        +++VME+  GG L D +V++  + E  I    
Sbjct: 64  IINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVC 122

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
           ++ +QAL              E LH                     +++HRD+K  NILL
Sbjct: 123 RECLQAL--------------EFLHSN-------------------QVIHRDIKSDNILL 149

Query: 132 SHSFGKQYPQPQHIKLKIADFGFA 155
               G          +K+ DFGF 
Sbjct: 150 GMD-G---------SVKLTDFGFC 163

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 75.9 bits (187), Expect = 3e-17
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 47/144 (32%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
           +  E   + +  H NVVE+       + ++++MEF  GG L D +VS+  L+E+ I    
Sbjct: 89  LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVC 147

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
           + ++QAL                LH +                    ++HRD+K  +ILL
Sbjct: 148 EAVLQAL--------------AYLHAQ-------------------GVIHRDIKSDSILL 174

Query: 132 SHSFGKQYPQPQHIKLKIADFGFA 155
           +   G         ++K++DFGF 
Sbjct: 175 TLD-G---------RVKLSDFGFC 188

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 75.4 bits (186), Expect = 4e-17
 Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 47/145 (32%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLAD-YLVSKGTLSEDTIRIF 70
            + E   L    H  +V+LL     D  +++++EFC GG +    L     L+E  I++ 
Sbjct: 63  YIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVV 122

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
            +Q+++AL                LH K                   RI+HRDLK  N+L
Sbjct: 123 CRQMLEAL--------------NFLHSK-------------------RIIHRDLKAGNVL 149

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFA 155
           ++   G          +++ADFG +
Sbjct: 150 MTLE-G---------DIRLADFGVS 164

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 75.5 bits (186), Expect = 4e-17
 Identities = 29/141 (20%), Positives = 47/141 (33%), Gaps = 47/141 (33%)

Query: 19  LTELHHENVVELL-HCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKQIVQ 76
             +  HENVV  +  C     H+ ++   C G  L   +  +K  L  +  R   ++IV+
Sbjct: 83  YRQTRHENVVLFMGACMSPP-HLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVK 141

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            +                LH K                    I+H+DLK +N+   +   
Sbjct: 142 GM--------------GYLHAK-------------------GILHKDLKSKNVFYDNG-- 166

Query: 137 KQYPQPQHIKLKIADFGFARF 157
                    K+ I DFG    
Sbjct: 167 ---------KVVITDFGLFSI 178

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 75.0 bits (185), Expect = 5e-17
 Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 47/149 (31%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
           I +E   L++     V +       D  ++++ME+  GG   D L+  G L E  I   L
Sbjct: 67  IQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATIL 125

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
           ++I++ L       LH E                            + +HRD+K  N+LL
Sbjct: 126 REILKGLDY-----LHSE----------------------------KKIHRDIKAANVLL 152

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           S   G         ++K+ADFG A  L D
Sbjct: 153 SEH-G---------EVKLADFGVAGQLTD 171

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 76.0 bits (187), Expect = 6e-17
 Identities = 31/144 (21%), Positives = 49/144 (34%), Gaps = 53/144 (36%)

Query: 19  LTELHHENVVELL-----HCKESDQHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRIFLK 72
           L E+ H ++V++        +  D   Y+VME+  G  L         L   + I   L 
Sbjct: 133 LAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSK--GQKLPVAEAIAY-LL 189

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I+ AL       LH                               +V+ DLKP+NI+L+
Sbjct: 190 EILPALSY-----LHS----------------------------IGLVYNDLKPENIMLT 216

Query: 133 HSFGKQYPQPQHIKLKIADFGFAR 156
                        +LK+ D G   
Sbjct: 217 EE-----------QLKLIDLGAVS 229

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 74.9 bits (184), Expect = 6e-17
 Identities = 28/159 (17%), Positives = 52/159 (32%), Gaps = 46/159 (28%)

Query: 5   SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLS- 63
           S S +      ++ +     +N V  L       ++Y+ M+ C   +L D++  + +L  
Sbjct: 101 SPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160

Query: 64  --EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
                      QI +A+     + LH +                             ++H
Sbjct: 161 REHGVCLHIFIQIAEAV-----EFLHSKG----------------------------LMH 187

Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDLKP NI  +              +K+ DFG    +  
Sbjct: 188 RDLKPSNIFFTMDD----------VVKVGDFGLVTAMDQ 216

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 75.6 bits (186), Expect = 7e-17
 Identities = 33/158 (20%), Positives = 55/158 (34%), Gaps = 52/158 (32%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLHC-----KESDQHVYLVMEFCNGGDLADYLVS 58
             ++  + IL+E   L  L  + ++ L              +Y+V+E     DL     +
Sbjct: 64  EDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA-DSDLKKLFKT 122

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
              L+E+ I+  L  ++                   +H                    + 
Sbjct: 123 PIFLTEEHIKTILYNLLLGENF--------------IHE-------------------SG 149

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           I+HRDLKP N LL+          Q   +K+ DFG AR
Sbjct: 150 IIHRDLKPANCLLN----------QDCSVKVCDFGLAR 177

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 74.2 bits (183), Expect = 9e-17
 Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 32/149 (21%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           L E   L +++H +V++L      D  + L++E+   G L  +L     +    +     
Sbjct: 74  LSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGS 133

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLV---MEFCNGGDLA--RIVHRDLKPQ 127
           +   +L     + L      +L+         + +   M++     LA  ++VHRDL  +
Sbjct: 134 RNSSSLDHPDERALTMG---DLISF------AWQISQGMQY-----LAEMKLVHRDLAAR 179

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           NIL++             K+KI+DFG +R
Sbjct: 180 NILVAEGR----------KMKISDFGLSR 198

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 74.7 bits (184), Expect = 1e-16
 Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 49/162 (30%)

Query: 5   SKSSIV---LTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS 58
           +K   V     R++ KE   +  L H  +V L +  + ++ +++V++   GGDL  +L  
Sbjct: 49  NKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ 108

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
                E+T+++F+ ++V AL              + L  +                   R
Sbjct: 109 NVHFKEETVKLFICELVMAL--------------DYLQNQ-------------------R 135

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           I+HRD+KP NILL    G       H+ +   DF  A  L  
Sbjct: 136 IIHRDMKPDNILLDEH-G-------HVHI--TDFNIAAMLPR 167

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 73.9 bits (182), Expect = 1e-16
 Identities = 37/145 (25%), Positives = 58/145 (40%), Gaps = 47/145 (32%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLAD-YLVSKGTLSEDTIRIF 70
           I+KE   + +    +VV+       +  +++VME+C  G ++D   +   TL+ED I   
Sbjct: 71  IIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATI 130

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
           L+  ++ L              E LH                     R +HRD+K  NIL
Sbjct: 131 LQSTLKGL--------------EYLHFM-------------------RKIHRDIKAGNIL 157

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFA 155
           L+   G           K+ADFG A
Sbjct: 158 LNTE-G---------HAKLADFGVA 172

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 74.5 bits (183), Expect = 2e-16
 Identities = 33/143 (23%), Positives = 56/143 (39%), Gaps = 43/143 (30%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           R +L  ++      +V + +   +   +  +++  NGGDL  +L   G  SE  +R +  
Sbjct: 240 RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA 299

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I+  L              E +H +                    +V+RDLKP NILL 
Sbjct: 300 EIILGL--------------EHMHNR-------------------FVVYRDLKPANILLD 326

Query: 133 HSFGKQYPQPQHIKLKIADFGFA 155
              G       H+  +I+D G A
Sbjct: 327 EH-G-------HV--RISDLGLA 339

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 74.4 bits (183), Expect = 2e-16
 Identities = 39/158 (24%), Positives = 64/158 (40%), Gaps = 50/158 (31%)

Query: 5   SKSSIVL---TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV- 57
           +K  ++    T    +E   L     + +  L +  + D ++YLVM++  GGDL   L  
Sbjct: 108 NKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSK 167

Query: 58  SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
            +  L E+  R +L ++V A+ +     +H  +                           
Sbjct: 168 FEDRLPEEMARFYLAEMVIAIDS-----VHQLH--------------------------- 195

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
             VHRD+KP NIL+  + G       HI+L  ADFG  
Sbjct: 196 -YVHRDIKPDNILMDMN-G-------HIRL--ADFGSC 222

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 73.5 bits (181), Expect = 3e-16
 Identities = 39/159 (24%), Positives = 57/159 (35%), Gaps = 53/159 (33%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLHC-----KESDQHVYLVMEFCNGGDLADYLVS 58
           S   L + +L+E   L   HH N++ L        + +   +YLV E     DLA  +  
Sbjct: 68  SDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHD 126

Query: 59  -KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
            +  +S   I+ F+  I+  L                LH                    A
Sbjct: 127 QRIVISPQHIQYFMYHILLGLHV--------------LHE-------------------A 153

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
            +VHRDL P NILL+ +            + I DF  AR
Sbjct: 154 GVVHRDLHPGNILLADNN----------DITICDFNLAR 182

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 73.0 bits (180), Expect = 4e-16
 Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 50/156 (32%)

Query: 5   SKSSIVL----TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV 57
            K+ IV     T H   E   L E+ H  +V+L++  ++   +YL++E+ +GG+L   L 
Sbjct: 54  KKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE 113

Query: 58  SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
            +G   EDT   +L +I  AL       LH +                            
Sbjct: 114 REGIFMEDTACFYLAEISMALGH-----LHQKG--------------------------- 141

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG 153
            I++RDLKP+NI+L+H  G       H+KL   DFG
Sbjct: 142 -IIYRDLKPENIMLNHQ-G-------HVKL--TDFG 166

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 72.8 bits (179), Expect = 5e-16
 Identities = 38/144 (26%), Positives = 51/144 (35%), Gaps = 46/144 (31%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
           I+KE   L +L H N ++   C   +   +LVME+C G       V K  L E  I    
Sbjct: 101 IIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVT 160

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
              +Q L                LH                      ++HRD+K  NILL
Sbjct: 161 HGALQGL--------------AYLHSH-------------------NMIHRDVKAGNILL 187

Query: 132 SHSFGKQYPQPQHIKLKIADFGFA 155
           S   G          +K+ DFG A
Sbjct: 188 SEP-G---------LVKLGDFGSA 201

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 72.3 bits (178), Expect = 5e-16
 Identities = 28/144 (19%), Positives = 47/144 (32%), Gaps = 47/144 (32%)

Query: 19  LTELHHENVVELL-HCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKQIVQ 76
           L +  H N++  + +       + +V ++C G  L  +L  S+       +    +Q  +
Sbjct: 74  LRKTRHVNILLFMGYSTA--PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTAR 131

Query: 77  ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG 136
            +              + LH K                    I+HRDLK  NI L     
Sbjct: 132 GM--------------DYLHAK-------------------SIIHRDLKSNNIFLH---- 154

Query: 137 KQYPQPQHIKLKIADFGFARFLQD 160
                 +   +KI DFG A     
Sbjct: 155 ------EDNTVKIGDFGLATEKSR 172

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 72.7 bits (179), Expect = 5e-16
 Identities = 44/148 (29%), Positives = 63/148 (42%), Gaps = 32/148 (21%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
            ++ +L    HEN+V LL        +YL+ E+C  GDL +YL SK     +    +  Q
Sbjct: 100 KMMTQLG--SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 157

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLV---MEFCNGGDLA--RIVHRDLKPQN 128
                     K L  E  + +L  ++     Y V   MEF     L     VHRDL  +N
Sbjct: 158 ----------KRLEEEEDLNVLTFEDLLCFAYQVAKGMEF-----LEFKSCVHRDLAARN 202

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           +L++H             +KI DFG AR
Sbjct: 203 VLVTHGK----------VVKICDFGLAR 220

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 72.4 bits (178), Expect = 5e-16
 Identities = 33/149 (22%), Positives = 49/149 (32%), Gaps = 47/149 (31%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFL 71
           LKE   +  L H NV++ +     D+ +  + E+  GG L   + S            F 
Sbjct: 55  LKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFA 114

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
           K I   +                          YL     N      I+HRDL   N L+
Sbjct: 115 KDIASGMA-------------------------YL--HSMN------IIHRDLNSHNCLV 141

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
             +            + +ADFG AR + D
Sbjct: 142 RENK----------NVVVADFGLARLMVD 160

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 71.9 bits (177), Expect = 6e-16
 Identities = 20/146 (13%), Positives = 39/146 (26%), Gaps = 45/146 (30%)

Query: 19  LTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI--FLKQI 74
           L    H NV+ +L         H  L+  +   G L + L        D  +   F   +
Sbjct: 61  LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
            + + AF    LH    +                          I    L  +++++   
Sbjct: 121 ARGM-AF----LHTLEPL--------------------------IPRHALNSRSVMID-- 147

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                   + +  +I+        Q 
Sbjct: 148 --------EDMTARISMADVKFSFQS 165

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 72.3 bits (178), Expect = 6e-16
 Identities = 43/149 (28%), Positives = 58/149 (38%), Gaps = 40/149 (26%)

Query: 14  HILKELTELHHENVVELL-HCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
            IL  +   HH NVV LL  C +    + +++EFC  G+L+ YL SK             
Sbjct: 82  KILIHIG--HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLV---MEFCNGGDLA--RIVHRDLKPQ 127
                L            +  L+         + V   MEF     LA  + +HRDL  +
Sbjct: 140 LYKDFLT-----------LEHLICY------SFQVAKGMEF-----LASRKCIHRDLAAR 177

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           NILLS              +KI DFG AR
Sbjct: 178 NILLSEKN----------VVKICDFGLAR 196

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 72.0 bits (177), Expect = 7e-16
 Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 40/144 (27%)

Query: 19  LTELHHENVVELL----HCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
              L HEN++  +      + S   ++L+  +   G L DYL    TL   +    +  I
Sbjct: 56  TVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL-QLTTLDTVSCLRIVLSI 114

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
              L                          +L +E         I HRDLK +NIL+   
Sbjct: 115 ASGL-------------------------AHLHIEIFGTQGKPAIAHRDLKSKNILVK-- 147

Query: 135 FGKQYPQPQHIKLKIADFGFARFL 158
                   ++ +  IAD G A   
Sbjct: 148 --------KNGQCCIADLGLAVMH 163

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 72.0 bits (177), Expect = 8e-16
 Identities = 33/149 (22%), Positives = 57/149 (38%), Gaps = 32/149 (21%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
            +E   + E  + N+V+LL      + + L+ E+   GDL ++L S    +  ++     
Sbjct: 98  QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 157

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLV---MEFCNGGDLA--RIVHRDLKPQ 127
                + +     L      E L           V   M +     L+  + VHRDL  +
Sbjct: 158 STRARVSSPGPPPLSCA---EQLCI------ARQVAAGMAY-----LSERKFVHRDLATR 203

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           N L+  +            +KIADFG +R
Sbjct: 204 NCLVGENM----------VVKIADFGLSR 222

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 71.9 bits (177), Expect = 9e-16
 Identities = 42/158 (26%), Positives = 60/158 (37%), Gaps = 53/158 (33%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLHC-----KESDQHVYLVMEFCNGGDLADYLVS 58
                 +  L+E   L    HEN++ +         E  + VY+V +     DL   L +
Sbjct: 64  EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLM-ETDLYKLLKT 122

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
           +  LS D I  FL QI++ LK               +H                    A 
Sbjct: 123 Q-HLSNDHICYFLYQILRGLKY--------------IHS-------------------AN 148

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           ++HRDLKP N+LL+ +            LKI DFG AR
Sbjct: 149 VLHRDLKPSNLLLNTTC----------DLKICDFGLAR 176

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 71.9 bits (177), Expect = 9e-16
 Identities = 39/147 (26%), Positives = 55/147 (37%), Gaps = 52/147 (35%)

Query: 16  LKELTELHHENVVELLHC------KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           L  L  + HENV+ LL          +    YLVM F    DL    +     SE+ I+ 
Sbjct: 74  LLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDL--QKIMGLKFSEEKIQY 130

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            + Q+++ LK               +H                    A +VHRDLKP N+
Sbjct: 131 LVYQMLKGLKY--------------IHS-------------------AGVVHRDLKPGNL 157

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFAR 156
            ++             +LKI DFG AR
Sbjct: 158 AVNEDC----------ELKILDFGLAR 174

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 71.9 bits (177), Expect = 9e-16
 Identities = 38/158 (24%), Positives = 63/158 (39%), Gaps = 53/158 (33%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLH-----CKESDQHVYLVMEFCNGGDLADYLVS 58
              +     L+E   L    HEN++ + +       E+   VY++ E     DL   ++S
Sbjct: 48  DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHR-VIS 105

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
              LS+D I+ F+ Q ++A+K               LH                    + 
Sbjct: 106 TQMLSDDHIQYFIYQTLRAVKV--------------LHG-------------------SN 132

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           ++HRDLKP N+L++           +  LK+ DFG AR
Sbjct: 133 VIHRDLKPSNLLIN----------SNCDLKVCDFGLAR 160

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 71.5 bits (176), Expect = 1e-15
 Identities = 36/152 (23%), Positives = 55/152 (36%), Gaps = 49/152 (32%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-------DT 66
            I+  L    HEN+V LL        V ++ E+C  GDL ++L  K  + E         
Sbjct: 101 KIMSHLG--QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158

Query: 67  IRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDL 124
                + ++    + QV +                      M F     LA    +HRD+
Sbjct: 159 STASTRDLLHF--SSQVAQ---------------------GMAF-----LASKNCIHRDV 190

Query: 125 KPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
             +N+LL++              KI DFG AR
Sbjct: 191 AARNVLLTNGH----------VAKIGDFGLAR 212

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 70.7 bits (174), Expect = 2e-15
 Identities = 29/155 (18%), Positives = 54/155 (34%), Gaps = 49/155 (31%)

Query: 13  RHILKELT----ELHHENVVELLHCKESDQHVYLVMEFCNGG---DLADYLVSKGTLSED 65
           + +L +L      +     V        +  V++ ME  +          +    T+ ED
Sbjct: 50  KRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPED 109

Query: 66  TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLK 125
            +      IV+AL+      LH +                             ++HRD+K
Sbjct: 110 ILGKIAVSIVKALE-----HLHSKL---------------------------SVIHRDVK 137

Query: 126 PQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           P N+L++   G         ++K+ DFG + +L D
Sbjct: 138 PSNVLINAL-G---------QVKMCDFGISGYLVD 162

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 71.2 bits (175), Expect = 2e-15
 Identities = 32/143 (22%), Positives = 63/143 (44%), Gaps = 45/143 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           R +L+ +       +V L +  +++  ++L++++ NGG+L  +L  +   +E  ++I++ 
Sbjct: 109 RQVLEHIR--QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG 166

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +IV AL     + LH                               I++RD+K +NILL 
Sbjct: 167 EIVLAL-----EHLHKLG----------------------------IIYRDIKLENILLD 193

Query: 133 HSFGKQYPQPQHIKLKIADFGFA 155
            + G       H+ L   DFG +
Sbjct: 194 SN-G-------HVVL--TDFGLS 206

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 70.8 bits (174), Expect = 3e-15
 Identities = 42/159 (26%), Positives = 63/159 (39%), Gaps = 54/159 (33%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLHC------KESDQHVYLVMEFCNGGDLADYLV 57
            SI+  +   +E   L  + HENV+ LL         E    VYLV     G DL + + 
Sbjct: 67  QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVK 125

Query: 58  SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
            +  L++D ++  + QI++ LK               +H                    A
Sbjct: 126 CQ-KLTDDHVQFLIYQILRGLKY--------------IHS-------------------A 151

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
            I+HRDLKP N+ ++             +LKI DFG AR
Sbjct: 152 DIIHRDLKPSNLAVNED----------CELKILDFGLAR 180

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 70.1 bits (172), Expect = 3e-15
 Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 54/157 (34%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL--------VSKGTLS 63
           +LKE   +++ HH N+V           ++LVM+  +GG + D +           G L 
Sbjct: 60  LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 119

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
           E TI   L+++++ L+      LH    +                            HRD
Sbjct: 120 ESTIATILREVLEGLEY-----LHKNGQI----------------------------HRD 146

Query: 124 LKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +K  NILL    G          ++IADFG + FL  
Sbjct: 147 VKAGNILLGED-G---------SVQIADFGVSAFLAT 173

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 70.6 bits (173), Expect = 3e-15
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 40/146 (27%)

Query: 18  ELTELHHENVVELL----HCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
           +   L HEN++  +        +   ++LV ++   G L DYL ++ T++ + +      
Sbjct: 89  QTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLALS 147

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSH 133
               L                          +L ME         I HRDLK +NIL+  
Sbjct: 148 TASGL-------------------------AHLHMEIVGTQGKPAIAHRDLKSKNILVK- 181

Query: 134 SFGKQYPQPQHIKLKIADFGFARFLQ 159
                    ++    IAD G A    
Sbjct: 182 ---------KNGTCCIADLGLAVRHD 198

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 69.9 bits (172), Expect = 4e-15
 Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 48/154 (31%)

Query: 5   SKSSIVL--TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK 59
            K+++ +        E   L E++H  +V+L +  +++  +YL+++F  GGDL   L  +
Sbjct: 61  KKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE 120

Query: 60  GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARI 119
              +E+ ++ +L ++  AL       LH                               I
Sbjct: 121 VMFTEEDVKFYLAELALALDH-----LHSLG----------------------------I 147

Query: 120 VHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG 153
           ++RDLKP+NILL    G       HIKL   DFG
Sbjct: 148 IYRDLKPENILLDEE-G-------HIKL--TDFG 171

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 70.3 bits (172), Expect = 5e-15
 Identities = 24/151 (15%), Positives = 47/151 (31%), Gaps = 48/151 (31%)

Query: 15  ILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRI 69
           +  E       +H N+V       +D  +++V  F   G   D + +     ++E  I  
Sbjct: 73  LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAY 132

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
            L+ +++AL       +HH   V                            HR +K  +I
Sbjct: 133 ILQGVLKALDY-----IHHMGYV----------------------------HRSVKASHI 159

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+S             K+ ++       +  
Sbjct: 160 LISVDG----------KVYLSGLRSNLSMIS 180

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 69.9 bits (172), Expect = 5e-15
 Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 46/143 (32%)

Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           H + E   L    H  +  L +  ++   +  VME+ NGG+L  +L  +   +E+  R +
Sbjct: 51  HTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFY 110

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             +IV AL+      LH  +                            +V+RD+K +N++
Sbjct: 111 GAEIVSALEY-----LHSRD----------------------------VVYRDIKLENLM 137

Query: 131 LSHSFGKQYPQPQHIKLKIADFG 153
           L    G       HI  KI DFG
Sbjct: 138 LDKD-G-------HI--KITDFG 150

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 69.6 bits (171), Expect = 5e-15
 Identities = 39/148 (26%), Positives = 56/148 (37%), Gaps = 37/148 (25%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
            +L  L   +H N+V LL          ++ E+C  GDL ++L  K      +       
Sbjct: 78  KVLSYLG--NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS------- 128

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLV---MEFCNGGDLA--RIVHRDLKPQN 128
             +   A    +    ++ +LL         Y V   M F     LA    +HRDL  +N
Sbjct: 129 --KTSPAIMEDDELALDLEDLLSF------SYQVAKGMAF-----LASKNCIHRDLAARN 175

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           ILL+H              KI DFG AR
Sbjct: 176 ILLTHGR----------ITKICDFGLAR 193

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 70.1 bits (172), Expect = 5e-15
 Identities = 43/155 (27%), Positives = 59/155 (38%), Gaps = 48/155 (30%)

Query: 5   SKSSIV---LTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS 58
            K  IV      H L E   L    H  +  L +  ++   +  VME+ NGG+L  +L  
Sbjct: 182 KKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR 241

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR 118
           +   SED  R +  +IV AL       LH E                             
Sbjct: 242 ERVFSEDRARFYGAEIVSALDY-----LHSEK---------------------------N 269

Query: 119 IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG 153
           +V+RDLK +N++L    G       HI  KI DFG
Sbjct: 270 VVYRDLKLENLMLDKD-G-------HI--KITDFG 294

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 69.8 bits (171), Expect = 6e-15
 Identities = 32/146 (21%), Positives = 48/146 (32%), Gaps = 40/146 (27%)

Query: 19  LTELHHENVVELL----HCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
              + HEN++  +        S   +YL+ ++   G L DYL S  TL   ++       
Sbjct: 85  TVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST-TLDAKSMLKLAYSS 143

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           V  L                          +L  E  +      I HRDLK +NIL+   
Sbjct: 144 VSGL-------------------------CHLHTEIFSTQGKPAIAHRDLKSKNILVK-- 176

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                   ++    IAD G A     
Sbjct: 177 --------KNGTCCIADLGLAVKFIS 194

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 69.7 bits (171), Expect = 7e-15
 Identities = 41/159 (25%), Positives = 61/159 (38%), Gaps = 54/159 (33%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLHC------KESDQHVYLVMEFCNGGDLADYLV 57
            S +  +   +E   L  + HENV+ LL         +     YLVM F  G DL   + 
Sbjct: 63  QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMK 121

Query: 58  SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
            +  L ED I+  + Q+++ L+               +H                    A
Sbjct: 122 HE-KLGEDRIQFLVYQMLKGLRY--------------IHA-------------------A 147

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
            I+HRDLKP N+ ++             +LKI DFG AR
Sbjct: 148 GIIHRDLKPGNLAVNEDC----------ELKILDFGLAR 176

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 69.3 bits (170), Expect = 8e-15
 Identities = 36/155 (23%), Positives = 60/155 (38%), Gaps = 53/155 (34%)

Query: 14  HILKELTELHHENVVELL------HCKESDQHVYLVMEFCNGGDLADYL--VSKGTLSED 65
           ++LK+ +  HH N+          +    D  ++LVMEFC  G + D +      TL E+
Sbjct: 72  NMLKKYS--HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEE 129

Query: 66  TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLK 125
            I    ++I++ L       LH   V+                            HRD+K
Sbjct: 130 WIAYICREILRGLSH-----LHQHKVI----------------------------HRDIK 156

Query: 126 PQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            QN+LL+ +           ++K+ DFG +  L  
Sbjct: 157 GQNVLLTENA----------EVKLVDFGVSAQLDR 181

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 69.2 bits (170), Expect = 8e-15
 Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 45/141 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           +H+ ++ +  +H  +V L  C +++  ++ V+E+ NGGDL  ++  +  L E+  R +  
Sbjct: 60  KHVFEQAS--NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA 117

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I  AL       LH                               I++RDLK  N+LL 
Sbjct: 118 EISLALNY-----LHERG----------------------------IIYRDLKLDNVLLD 144

Query: 133 HSFGKQYPQPQHIKLKIADFG 153
              G       HIKL   D+G
Sbjct: 145 SE-G-------HIKL--TDYG 155

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 68.9 bits (169), Expect = 8e-15
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 53/153 (34%)

Query: 16  LKE---LTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRI 69
            KE   L  L+HEN+V+      ++    + L+MEF   G L +YL   K  ++      
Sbjct: 71  KKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLK 130

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQ 127
           +  QI +                               M++     L   + VHRDL  +
Sbjct: 131 YAVQICKG------------------------------MDY-----LGSRQYVHRDLAAR 155

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           N+L+              ++KI DFG  + ++ 
Sbjct: 156 NVLVES----------EHQVKIGDFGLTKAIET 178

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 69.2 bits (170), Expect = 9e-15
 Identities = 32/141 (22%), Positives = 50/141 (35%), Gaps = 45/141 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           + +L          + +L  C ++   +Y VME+ NGGDL  ++   G   E     +  
Sbjct: 71  KRVLALPG--KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAA 128

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I   L       L  +                             I++RDLK  N++L 
Sbjct: 129 EIAIGLFF-----LQSKG----------------------------IIYRDLKLDNVMLD 155

Query: 133 HSFGKQYPQPQHIKLKIADFG 153
              G       HIK+  ADFG
Sbjct: 156 SE-G-------HIKI--ADFG 166

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 68.8 bits (169), Expect = 9e-15
 Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 61/167 (36%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLH--------------CKESDQHVYLVMEFCNG 49
           +     +H L+E   +  L H+N+V++                       VY+V E+   
Sbjct: 47  TDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYM-E 105

Query: 50  GDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVME 109
            DLA+ ++ +G L E+  R+F+ Q+++ LK               +H             
Sbjct: 106 TDLAN-VLEQGPLLEEHARLFMYQLLRGLKY--------------IHS------------ 138

Query: 110 FCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
                  A ++HRDLKP N+ ++          + + LKI DFG AR
Sbjct: 139 -------ANVLHRDLKPANLFIN---------TEDLVLKIGDFGLAR 169

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 68.9 bits (169), Expect = 9e-15
 Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 39/148 (26%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
            ++K +    H+N++ LL     D  +Y+++E+ + G+L +YL ++     +      + 
Sbjct: 92  EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 149

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLV---MEFCNGGDLA--RIVHRDLKPQN 128
             + +              +L+ C       Y +   ME+     LA  + +HRDL  +N
Sbjct: 150 PEEQM-----------TFKDLVSC------TYQLARGMEY-----LASQKCIHRDLAARN 187

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           +L++ +            +KIADFG AR
Sbjct: 188 VLVTENN----------VMKIADFGLAR 205

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 68.9 bits (169), Expect = 1e-14
 Identities = 32/156 (20%), Positives = 50/156 (32%), Gaps = 50/156 (32%)

Query: 13  RHILKELT----ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADY----LVSKGTLSE 64
           + +L +L           +V+       +   ++ ME  +      Y     V    + E
Sbjct: 65  KQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPE 124

Query: 65  DTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDL 124
           + +       V+AL       L                               +I+HRD+
Sbjct: 125 EILGKITLATVKALN-----HLKENL---------------------------KIIHRDI 152

Query: 125 KPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           KP NILL  S G       +IKL   DFG +  L D
Sbjct: 153 KPSNILLDRS-G-------NIKL--CDFGISGQLVD 178

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 69.2 bits (170), Expect = 1e-14
 Identities = 39/143 (27%), Positives = 56/143 (39%), Gaps = 45/143 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           R++L  L  + H  +V L    ++   +Y V+++ NGG+L  +L  +    E   R +  
Sbjct: 89  RNVL--LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAA 146

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I  AL       LH  N                            IV+RDLKP+NILL 
Sbjct: 147 EIASALGY-----LHSLN----------------------------IVYRDLKPENILLD 173

Query: 133 HSFGKQYPQPQHIKLKIADFGFA 155
              G       HI L   DFG  
Sbjct: 174 SQ-G-------HIVL--TDFGLC 186

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 68.9 bits (169), Expect = 1e-14
 Identities = 33/148 (22%), Positives = 65/148 (43%), Gaps = 39/148 (26%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
            ++K +    H+N++ LL     D  +Y+++E+ + G+L +YL ++     +      + 
Sbjct: 138 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRV 195

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLV---MEFCNGGDLA--RIVHRDLKPQN 128
             + +              +L+ C       Y +   ME+     LA  + +HRDL  +N
Sbjct: 196 PEEQM-----------TFKDLVSC------TYQLARGMEY-----LASQKCIHRDLAARN 233

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           +L++ +            +KIADFG AR
Sbjct: 234 VLVTENN----------VMKIADFGLAR 251

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 68.9 bits (169), Expect = 1e-14
 Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 45/141 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           +H+ ++ +  +H  +V L  C +++  ++ V+E+ NGGDL  ++  +  L E+  R +  
Sbjct: 103 KHVFEQAS--NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA 160

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I  AL       LH                               I++RDLK  N+LL 
Sbjct: 161 EISLALNY-----LHERG----------------------------IIYRDLKLDNVLLD 187

Query: 133 HSFGKQYPQPQHIKLKIADFG 153
              G       HIKL   D+G
Sbjct: 188 SE-G-------HIKL--TDYG 198

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 68.2 bits (167), Expect = 1e-14
 Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 38/146 (26%)

Query: 19  LTELHHENVVELL-HCKESD---QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           L  + HEN+++ +   K        ++L+  F   G L+D+L     +S + +    + +
Sbjct: 72  LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFL-KANVVSWNELCHIAETM 130

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
            + L A+    LH +        K                    I HRD+K +N+LL ++
Sbjct: 131 ARGL-AY----LHEDIPGLKDGHK------------------PAISHRDIKSKNVLLKNN 167

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                         IADFG A   + 
Sbjct: 168 L----------TACIADFGLALKFEA 183

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 68.7 bits (168), Expect = 2e-14
 Identities = 39/159 (24%), Positives = 59/159 (37%), Gaps = 55/159 (34%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLHC------KESDQHVYLVMEFCNGGDLADYLV 57
            +    +   +E   +  ++H+N++ LL+        E  Q VYLVME     +L    V
Sbjct: 100 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL--CQV 156

Query: 58  SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
            +  L  + +   L Q++  +K               LH                    A
Sbjct: 157 IQMELDHERMSYLLYQMLCGIKH--------------LHS-------------------A 183

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
            I+HRDLKP NI++               LKI DFG AR
Sbjct: 184 GIIHRDLKPSNIVVK----------SDCTLKILDFGLAR 212

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 68.6 bits (168), Expect = 2e-14
 Identities = 30/185 (16%), Positives = 60/185 (32%), Gaps = 85/185 (45%)

Query: 16  LKELTELHHENVVELLHC--------------------------------------KESD 37
           L  +  L H N+++L+                                           +
Sbjct: 51  LDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQN 110

Query: 38  QHVYLVMEFCNGGDL----ADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVE 93
           +++ ++ME+     L      ++ S  ++  + I I++ Q+ +A+               
Sbjct: 111 KYLNVIMEYV-PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF------------- 156

Query: 94  LLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG 153
            +H                      I HRD+KPQN+L++          +   LK+ DFG
Sbjct: 157 -IHS-------------------LGICHRDIKPQNLLVN---------SKDNTLKLCDFG 187

Query: 154 FARFL 158
            A+ L
Sbjct: 188 SAKKL 192

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 68.5 bits (168), Expect = 2e-14
 Identities = 35/149 (23%), Positives = 66/149 (44%), Gaps = 33/149 (22%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
            ++K +    H+N++ LL     D  +Y+++E+ + G+L +YL ++     +        
Sbjct: 126 EMMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHN 183

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQNILL 131
             + L           +  +L+ C  + Q V   ME+     LA  + +HRDL  +N+L+
Sbjct: 184 PEEQL-----------SSKDLVSC--AYQ-VARGMEY-----LASKKCIHRDLAARNVLV 224

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +              +KIADFG AR +  
Sbjct: 225 TEDN----------VMKIADFGLARDIHH 243

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 68.1 bits (167), Expect = 2e-14
 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 39/148 (26%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQ 73
            +L +L   HH N++ LL   E   ++YL +E+   G+L D+L     L  D        
Sbjct: 77  EVLCKLG--HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 134

Query: 74  IVQALKAFQVKELHHENVVELLHCKESDQHVYLV---MEFCNGGDLA--RIVHRDLKPQN 128
               L + Q           LLH          V   M++     L+  + +HRDL  +N
Sbjct: 135 TASTLSSQQ-----------LLHF------AADVARGMDY-----LSQKQFIHRDLAARN 172

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           IL+  ++            KIADFG +R
Sbjct: 173 ILVGENY----------VAKIADFGLSR 190

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 68.0 bits (167), Expect = 2e-14
 Identities = 38/141 (26%), Positives = 55/141 (39%), Gaps = 45/141 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           + IL      +H  + +L  C ++   ++ VMEF NGGDL  ++       E   R +  
Sbjct: 74  KRILSLAR--NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAA 131

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I+ AL       LH +                             I++RDLK  N+LL 
Sbjct: 132 EIISALMF-----LHDKG----------------------------IIYRDLKLDNVLLD 158

Query: 133 HSFGKQYPQPQHIKLKIADFG 153
           H  G       H KL  ADFG
Sbjct: 159 HE-G-------HCKL--ADFG 169

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 68.2 bits (167), Expect = 2e-14
 Identities = 35/156 (22%), Positives = 61/156 (39%), Gaps = 51/156 (32%)

Query: 7   SSIVLTRHILKELTELH----HENVVELLHC--KESDQHVYLVMEFCNGGDLADYLVSKG 60
            +    +   +E+  L     HEN+V LL+    ++D+ VYLV ++    DL   + +  
Sbjct: 47  QNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM-ETDLHAVIRAN- 104

Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
            L     +  + Q+++ +K               LH                      ++
Sbjct: 105 ILEPVHKQYVVYQLIKVIKY--------------LHS-------------------GGLL 131

Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           HRD+KP NILL+              +K+ADFG +R
Sbjct: 132 HRDMKPSNILLN----------AECHVKVADFGLSR 157

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 67.7 bits (166), Expect = 2e-14
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 53/153 (34%)

Query: 16  LKE---LTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRI 69
            +E   L  L H+N+V+          +++ L+ME+   G L DYL   K  +    +  
Sbjct: 59  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 118

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQ 127
           +  QI +                               ME+     L   R +HRDL  +
Sbjct: 119 YTSQICKG------------------------------MEY-----LGTKRYIHRDLATR 143

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           NIL+ +            ++KI DFG  + L  
Sbjct: 144 NILVEN----------ENRVKIGDFGLTKVLPQ 166

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 68.0 bits (167), Expect = 2e-14
 Identities = 34/141 (24%), Positives = 53/141 (37%), Gaps = 45/141 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           + +L       H  +  +    ++ ++++ VME+ NGGDL  ++ S           +  
Sbjct: 68  KRVLS--LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAA 125

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I+  L+      LH +                             IV+RDLK  NILL 
Sbjct: 126 EIILGLQF-----LHSKG----------------------------IVYRDLKLDNILLD 152

Query: 133 HSFGKQYPQPQHIKLKIADFG 153
              G       HI  KIADFG
Sbjct: 153 KD-G-------HI--KIADFG 163

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 68.3 bits (167), Expect = 3e-14
 Identities = 39/152 (25%), Positives = 59/152 (38%), Gaps = 48/152 (31%)

Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL--VSKGTLSEDTIR 68
             L E   L +++   VV L +  E+   + LV+   NGGDL  ++  + +    E    
Sbjct: 230 MALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAV 289

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
            +  +I   L              E LH +                   RIV+RDLKP+N
Sbjct: 290 FYAAEICCGL--------------EDLHRE-------------------RIVYRDLKPEN 316

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ILL    G       HI  +I+D G A  + +
Sbjct: 317 ILLD-DHG-------HI--RISDLGLAVHVPE 338

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 66.8 bits (164), Expect = 4e-14
 Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 40/153 (26%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
             E      L H NVV LL     DQ + ++  +C+ GDL ++LV +   S+       +
Sbjct: 60  RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLV---MEFCNGGDLA--RIVHRDLKPQ 127
            +  AL+             + +H       V  +   ME+     L+   +VH+DL  +
Sbjct: 120 TVKSALE-----------PPDFVHL------VAQIAAGMEY-----LSSHHVVHKDLATR 157

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           N+L+               +KI+D G  R +  
Sbjct: 158 NVLVYDKL----------NVKISDLGLFREVYA 180

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 67.0 bits (164), Expect = 6e-14
 Identities = 38/159 (23%), Positives = 59/159 (37%), Gaps = 55/159 (34%)

Query: 7   SSIVLTRHILKE---LTELHHENVVELLHC------KESDQHVYLVMEFCNGGDLADYLV 57
            +    +   +E   +  ++H+N++ LL+        E  Q VY+VME     +L    V
Sbjct: 63  QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL--CQV 119

Query: 58  SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
            +  L  + +   L Q++  +K               LH                    A
Sbjct: 120 IQMELDHERMSYLLYQMLCGIKH--------------LHS-------------------A 146

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
            I+HRDLKP NI++               LKI DFG AR
Sbjct: 147 GIIHRDLKPSNIVVKSDC----------TLKILDFGLAR 175

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 66.4 bits (162), Expect = 8e-14
 Identities = 27/149 (18%), Positives = 47/149 (31%), Gaps = 42/149 (28%)

Query: 18  ELTELHHENVVELL-----HCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
            +  + H+N+   +        +      LVME+   G L  YL    +    + R+   
Sbjct: 60  RVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAH- 118

Query: 73  QIVQALKAFQVKELH-HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
            + + L        + H  +    H K                    I HRDL  +N+L+
Sbjct: 119 SVTRGL-------AYLHTELPRGDHYK------------------PAISHRDLNSRNVLV 153

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            +               I+DFG +  L  
Sbjct: 154 KNDG----------TCVISDFGLSMRLTG 172

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 66.7 bits (163), Expect = 9e-14
 Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 48/150 (32%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIF 70
           LKE   + E+ H N+V+LL     +   Y++ EF   G+L DYL       +S   +   
Sbjct: 264 LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 323

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QI  A++                         YL  E  N       +HR+L  +N L
Sbjct: 324 ATQISSAME-------------------------YL--EKKN------FIHRNLAARNCL 350

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +           ++  +K+ADFG +R +  
Sbjct: 351 VG----------ENHLVKVADFGLSRLMTG 370

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 65.7 bits (161), Expect = 9e-14
 Identities = 31/150 (20%), Positives = 56/150 (37%), Gaps = 49/150 (32%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFL 71
           ++E   + +L H  +V+L         + LV EF   G L+DYL + +G  + +T+    
Sbjct: 51  IEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMC 110

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYL-VMEFCNGGDLARIVHRDLKPQNIL 130
             + + +                          YL              +HRDL  +N L
Sbjct: 111 LDVCEGMA-------------------------YLEEACV---------IHRDLAARNCL 136

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +           ++  +K++DFG  RF+ D
Sbjct: 137 VG----------ENQVIKVSDFGMTRFVLD 156

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 66.7 bits (163), Expect = 9e-14
 Identities = 35/149 (23%), Positives = 54/149 (36%), Gaps = 50/149 (33%)

Query: 14  HILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDL----ADYLVSKGTLSEDT 66
             + E   L ++H   +V L +  E+   + LVM   NGGD+     +         E  
Sbjct: 231 GAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR 290

Query: 67  IRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKP 126
              +  QIV  L              E LH +                    I++RDLKP
Sbjct: 291 AIFYTAQIVSGL--------------EHLHQR-------------------NIIYRDLKP 317

Query: 127 QNILLSHSFGKQYPQPQHIKLKIADFGFA 155
           +N+LL    G       ++  +I+D G A
Sbjct: 318 ENVLLDDD-G-------NV--RISDLGLA 336

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 66.2 bits (162), Expect = 9e-14
 Identities = 34/153 (22%), Positives = 55/153 (35%), Gaps = 53/153 (34%)

Query: 16  LKE---LTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRI 69
            +E   L  L H+N+V+          +++ L+ME+   G L DYL   K  +    +  
Sbjct: 90  EREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQ 149

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQ 127
           +  QI +                               ME+     L   R +HRDL  +
Sbjct: 150 YTSQICKG------------------------------MEY-----LGTKRYIHRDLATR 174

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           NIL+ +            ++KI DFG  + L  
Sbjct: 175 NILVEN----------ENRVKIGDFGLTKVLPQ 197

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 66.1 bits (162), Expect = 1e-13
 Identities = 33/151 (21%), Positives = 52/151 (34%), Gaps = 50/151 (33%)

Query: 15  ILKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRI 69
           IL E   +  + + +V  LL  C      V L+ +    G L DY+   K  +    +  
Sbjct: 64  ILDEAYVMASVDNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 121

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           +  QI + +                          YL        +  R+VHRDL  +N+
Sbjct: 122 WCVQIAKGMN-------------------------YL--------EDRRLVHRDLAARNV 148

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+               +KI DFG A+ L  
Sbjct: 149 LVK----------TPQHVKITDFGLAKLLGA 169

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 65.7 bits (161), Expect = 1e-13
 Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 52/152 (34%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIF 70
           LKE   + E+ H N+V+LL     +   Y++ EF   G+L DYL    +  +S   +   
Sbjct: 57  LKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYM 116

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR--IVHRDLKPQN 128
             QI  A                              ME+     L +   +HRDL  +N
Sbjct: 117 ATQISSA------------------------------MEY-----LEKKNFIHRDLAARN 141

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            L+           ++  +K+ADFG +R +  
Sbjct: 142 CLVG----------ENHLVKVADFGLSRLMTG 163

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 66.2 bits (161), Expect = 1e-13
 Identities = 33/141 (23%), Positives = 50/141 (35%), Gaps = 45/141 (31%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           + +L          + +L  C ++   +Y VME+ NGGDL  ++   G   E     +  
Sbjct: 392 KRVLALPG--KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAA 449

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I   L       L  +                             I++RDLK  N++L 
Sbjct: 450 EIAIGLFF-----LQSKG----------------------------IIYRDLKLDNVMLD 476

Query: 133 HSFGKQYPQPQHIKLKIADFG 153
              G       HI  KIADFG
Sbjct: 477 SE-G-------HI--KIADFG 487

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 65.5 bits (160), Expect = 1e-13
 Identities = 17/135 (12%), Positives = 32/135 (23%), Gaps = 45/135 (33%)

Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
           +    V  +L    +     +V E+  GG L + +          IR  ++ +  A  A 
Sbjct: 88  IDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQE-VADTSPSPVGAIRA-MQSLAAAADA- 144

Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
                H                             A +      P  + +S   G     
Sbjct: 145 ----AHR----------------------------AGVALSIDHPSRVRVSID-G----- 166

Query: 142 PQHIKLKIADFGFAR 156
                + +A      
Sbjct: 167 ----DVVLAYPATMP 177

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 64.9 bits (159), Expect = 2e-13
 Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 52/151 (34%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIF 70
           L+E   + +  H ++V+L+     ++  V+++ME C  G+L  +L   K +L   ++ ++
Sbjct: 64  LQEALTMRQFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKYSLDLASLILY 121

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL-VMEFCNGGDLARIVHRDLKPQNI 129
             Q+  AL                          YL    F         VHRD+  +N+
Sbjct: 122 AYQLSTALA-------------------------YLESKRF---------VHRDIAARNV 147

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+S           +  +K+ DFG +R+++D
Sbjct: 148 LVSS----------NDCVKLGDFGLSRYMED 168

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 64.9 bits (159), Expect = 2e-13
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 49/150 (32%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFL 71
            +E   + +L H  +V+       +  +Y+V E+ + G L +YL S G  L    +    
Sbjct: 51  FQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC 110

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYL-VMEFCNGGDLARIVHRDLKPQNIL 130
             + + +                          +L   +F         +HRDL  +N L
Sbjct: 111 YDVCEGMA-------------------------FLESHQF---------IHRDLAARNCL 136

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +           + + +K++DFG  R++ D
Sbjct: 137 VD----------RDLCVKVSDFGMTRYVLD 156

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 49/150 (32%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFL 71
           L E   + +  H N++ L       +   +V E+   G L  +L +  G  +   +   L
Sbjct: 98  LSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGML 157

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYL-VMEFCNGGDLARIVHRDLKPQNIL 130
           + +   ++                         YL  + +         VHRDL  +N+L
Sbjct: 158 RGVGAGMR-------------------------YLSDLGY---------VHRDLAARNVL 183

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +            ++  K++DFG +R L+D
Sbjct: 184 VD----------SNLVCKVSDFGLSRVLED 203

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 64.9 bits (159), Expect = 2e-13
 Identities = 36/150 (24%), Positives = 58/150 (38%), Gaps = 34/150 (22%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
            +E   LT L HE++V+          + +V E+   GDL  +L + G  +   +    +
Sbjct: 65  QREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPR 124

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQNIL 130
           Q    L   Q           +LH   + Q +   M +     LA    VHRDL  +N L
Sbjct: 125 QAKGELGLSQ-----------MLHI--ASQ-IASGMVY-----LASQHFVHRDLATRNCL 165

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +  +            +KI DFG +R +  
Sbjct: 166 VGANL----------LVKIGDFGMSRDVYS 185

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 65.0 bits (159), Expect = 2e-13
 Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 38/149 (25%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           L E   +++ +H+N+V  +         +++ME   GGDL  +L            + + 
Sbjct: 81  LMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAML 140

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYL-VMEFCNGGDLARIVHRDLKPQNILL 131
            ++    A  +                +    YL    F         +HRD+  +N LL
Sbjct: 141 DLLHV--ARDI----------------ACGCQYLEENHF---------IHRDIAARNCLL 173

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +               KI DFG AR +  
Sbjct: 174 T-------CPGPGRVAKIGDFGMARDIYR 195

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 64.9 bits (159), Expect = 2e-13
 Identities = 28/150 (18%), Positives = 57/150 (38%), Gaps = 49/150 (32%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFL 71
           ++E   +  L HE +V+L       + ++++ E+   G L +YL   +       +    
Sbjct: 67  IEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMC 126

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYL-VMEFCNGGDLARIVHRDLKPQNIL 130
           K + +A++                         YL   +F         +HRDL  +N L
Sbjct: 127 KDVCEAME-------------------------YLESKQF---------LHRDLAARNCL 152

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ++              +K++DFG +R++ D
Sbjct: 153 VN----------DQGVVKVSDFGLSRYVLD 172

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 42/151 (27%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           L E   + E +  +VV LL      Q   ++ME    GDL  YL S      +   +   
Sbjct: 76  LNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPP 135

Query: 73  QIVQALK-AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQNI 129
            + + ++ A ++ +                      M +     L   + VHRDL  +N 
Sbjct: 136 SLSKMIQMAGEIAD---------------------GMAY-----LNANKFVHRDLAARNC 169

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +++  F           +KI DFG  R + +
Sbjct: 170 MVAEDF----------TVKIGDFGMTRDIYE 190

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 26/149 (17%), Positives = 50/149 (33%), Gaps = 39/149 (26%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFL 71
            +    +++L H+++V             LV EF   G L  YL   K  ++        
Sbjct: 60  FEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVA 119

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
           KQ+  A+                          +L        +   ++H ++  +NILL
Sbjct: 120 KQLAAAMH-------------------------FL--------EENTLIHGNVCAKNILL 146

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
                ++   P  I  K++D G +  +  
Sbjct: 147 IREEDRKTGNPPFI--KLSDPGISITVLP 173

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 65.1 bits (159), Expect = 3e-13
 Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 49/147 (33%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRI 69
           L E   +T+L H N+V+LL    E    +Y+V E+   G L DYL S+G   L  D +  
Sbjct: 234 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 293

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           F   + +A++                         YL  E  N       VHRDL  +N+
Sbjct: 294 FSLDVCEAME-------------------------YL--EGNN------FVHRDLAARNV 320

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFAR 156
           L+S          +    K++DFG  +
Sbjct: 321 LVS----------EDNVAKVSDFGLTK 337

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 64.7 bits (158), Expect = 3e-13
 Identities = 37/153 (24%), Positives = 54/153 (35%), Gaps = 53/153 (34%)

Query: 16  LKE---LTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRI 69
            +E   L  LH + +V+          Q + LVME+   G L D+L   +  L    + +
Sbjct: 72  QREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLL 131

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQ 127
           +  QI +                               ME+     L   R VHRDL  +
Sbjct: 132 YSSQICKG------------------------------MEY-----LGSRRCVHRDLAAR 156

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           NIL+               +KIADFG A+ L  
Sbjct: 157 NILVES----------EAHVKIADFGLAKLLPL 179

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 64.1 bits (157), Expect = 3e-13
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 50/150 (33%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIF 70
           + E   +  L H ++V+L+      ++  +++ME    G+L  YL   K +L   T+ ++
Sbjct: 61  MSEAVIMKNLDHPHIVKLIGII--EEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 118

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QI +A+                          YL  E  N       VHRD+  +NIL
Sbjct: 119 SLQICKAMA-------------------------YL--ESIN------CVHRDIAVRNIL 145

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ++              +K+ DFG +R+++D
Sbjct: 146 VA----------SPECVKLGDFGLSRYIED 165

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 64.7 bits (158), Expect = 3e-13
 Identities = 26/150 (17%), Positives = 50/150 (33%), Gaps = 40/150 (26%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           L E   +++ +H+N+V  +         ++++E   GGDL  +L            + + 
Sbjct: 122 LMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAML 181

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQNIL 130
            ++    A  +                         ++     L     +HRD+  +N L
Sbjct: 182 DLLHV--ARDIAC---------------------GCQY-----LEENHFIHRDIAARNCL 213

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+               KI DFG AR +  
Sbjct: 214 LT-------CPGPGRVAKIGDFGMARDIYR 236

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 64.7 bits (158), Expect = 4e-13
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 49/150 (32%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFL 71
           L E   + +  H N++ L       + + ++ E+   G L  +L    G  S   +   L
Sbjct: 94  LGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML 153

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYL-VMEFCNGGDLARIVHRDLKPQNIL 130
           + I   +K                         YL  M +         VHRDL  +NIL
Sbjct: 154 RGIAAGMK-------------------------YLANMNY---------VHRDLAARNIL 179

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ++           ++  K++DFG +R L+D
Sbjct: 180 VN----------SNLVCKVSDFGLSRVLED 199

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 64.2 bits (157), Expect = 4e-13
 Identities = 34/149 (22%), Positives = 52/149 (34%), Gaps = 49/149 (32%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
           L E   + +L +  +V ++  C    +   LVME    G L  YL     + +  I   +
Sbjct: 66  LAEANVMQQLDNPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV 123

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
            Q+   +K                         YL  E  N       VHRDL  +N+LL
Sbjct: 124 HQVSMGMK-------------------------YL--EESN------FVHRDLAARNVLL 150

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
                           KI+DFG ++ L+ 
Sbjct: 151 V----------TQHYAKISDFGLSKALRA 169

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 64.7 bits (158), Expect = 4e-13
 Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 49/150 (32%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFL 71
           L E   + +  H N++ L       + V +V E+   G L  +L       +   +   L
Sbjct: 94  LGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML 153

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYL-VMEFCNGGDLARIVHRDLKPQNIL 130
           + I   +K                         YL  M +         VHRDL  +NIL
Sbjct: 154 RGIASGMK-------------------------YLSDMGY---------VHRDLAARNIL 179

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ++           ++  K++DFG  R L+D
Sbjct: 180 IN----------SNLVCKVSDFGLGRVLED 199

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 64.2 bits (157), Expect = 4e-13
 Identities = 33/152 (21%), Positives = 58/152 (38%), Gaps = 52/152 (34%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIF 70
           L+E   +  L+H NV+ L+      +   ++++ +   GDL  ++   +   +   +  F
Sbjct: 70  LREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISF 129

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQN 128
             Q+ +                               ME+     LA  + VHRDL  +N
Sbjct: 130 GLQVARG------------------------------MEY-----LAEQKFVHRDLAARN 154

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            +L  SF           +K+ADFG AR + D
Sbjct: 155 CMLDESF----------TVKVADFGLARDILD 176

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 64.4 bits (157), Expect = 5e-13
 Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 52/152 (34%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIF 70
           L E   + +  H NV+ LL  C  S+    +V+ +   GDL +++       +   +  F
Sbjct: 138 LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 197

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQN 128
             Q+ +                               M+F     LA  + VHRDL  +N
Sbjct: 198 GLQVAKG------------------------------MKF-----LASKKFVHRDLAARN 222

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            +L   F           +K+ADFG AR + D
Sbjct: 223 CMLDEKF----------TVKVADFGLARDMYD 244

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 64.2 bits (157), Expect = 6e-13
 Identities = 36/149 (24%), Positives = 54/149 (36%), Gaps = 47/149 (31%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFL 71
           L+E   L +  H N+V L+      Q +Y+VME   GGD   +L ++G  L   T+   +
Sbjct: 160 LQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMV 219

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
                 +              E L  K                     +HRDL  +N L+
Sbjct: 220 GDAAAGM--------------EYLESK-------------------CCIHRDLAARNCLV 246

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +              LKI+DFG +R   D
Sbjct: 247 TE----------KNVLKISDFGMSREEAD 265

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 63.9 bits (156), Expect = 6e-13
 Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 53/152 (34%)

Query: 16  LKE---LTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
            +E   L  L+HE++++   C        + LVME+   G L DYL  + ++    + +F
Sbjct: 81  KQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-PRHSIGLAQLLLF 139

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQN 128
            +QI +                               M +     L     +HRDL  +N
Sbjct: 140 AQQICEG------------------------------MAY-----LHAQHYIHRDLAARN 164

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +LL +             +KI DFG A+ + +
Sbjct: 165 VLLDNDR----------LVKIGDFGLAKAVPE 186

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 63.4 bits (155), Expect = 6e-13
 Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 51/151 (33%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRI 69
           L E   + +L H+ +V L      + + +Y++ E+   G L D+L +     L+ + +  
Sbjct: 56  LAEANLMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
              QI + +                          ++  E  N       +HRDL+  NI
Sbjct: 114 MAAQIAEGMA-------------------------FI--EERN------YIHRDLRAANI 140

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+S            +  KIADFG AR ++D
Sbjct: 141 LVS----------DTLSCKIADFGLARLIED 161

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 63.4 bits (155), Expect = 7e-13
 Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 53/149 (35%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRI 69
           L E   +T+L H N+V+LL    E    +Y+V E+   G L DYL S+G   L  D +  
Sbjct: 62  LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLK 121

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQ 127
           F   + +A                              ME+     L     VHRDL  +
Sbjct: 122 FSLDVCEA------------------------------MEY-----LEGNNFVHRDLAAR 146

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFAR 156
           N+L+S          +    K++DFG  +
Sbjct: 147 NVLVS----------EDNVAKVSDFGLTK 165

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 63.4 bits (155), Expect = 7e-13
 Identities = 31/150 (20%), Positives = 49/150 (32%), Gaps = 50/150 (33%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIF 70
           ++E   +  L H N++ L          + +V E    G L D L   +G     T+  +
Sbjct: 69  IREVNAMHSLDHRNLIRLYGVV--LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRY 126

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             Q+ + +                          YL  E          +HRDL  +N+L
Sbjct: 127 AVQVAEGMG-------------------------YL--ESKR------FIHRDLAARNLL 153

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+              +KI DFG  R L  
Sbjct: 154 LA----------TRDLVKIGDFGLMRALPQ 173

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 63.5 bits (155), Expect = 8e-13
 Identities = 30/151 (19%), Positives = 53/151 (35%), Gaps = 50/151 (33%)

Query: 15  ILKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRI 69
           +      +  L H ++V LL  C      + LV ++   G L D++   +G L    +  
Sbjct: 62  VTDHMLAIGSLDHAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLN 119

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           +  QI + +                          YL        +   +VHR+L  +N+
Sbjct: 120 WGVQIAKGMY-------------------------YL--------EEHGMVHRNLAARNV 146

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LL              ++++ADFG A  L  
Sbjct: 147 LLK----------SPSQVQVADFGVADLLPP 167

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 63.5 bits (154), Expect = 9e-13
 Identities = 15/146 (10%), Positives = 33/146 (22%), Gaps = 51/146 (34%)

Query: 19  LTELHHENVVELLHCKE--SDQHVYLVMEFCNG------GDLADYLVSKGTLSEDTIRIF 70
           +         +L   ++  +  +  L+M   +         L    V +G      + I 
Sbjct: 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHIL 199

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             Q+++         L                                +VH    P N+ 
Sbjct: 200 TAQLIRLAAN-----LQS----------------------------KGLVHGHFTPDNLF 226

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +              +L + D     
Sbjct: 227 IM----------PDGRLMLGDVSALW 242

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 34/152 (22%), Positives = 56/152 (36%), Gaps = 52/152 (34%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIF 70
           L E   + +  H NV+ LL  C  S+    +V+ +   GDL +++       +   +  F
Sbjct: 74  LTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGF 133

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLKPQN 128
             Q+ +                               M++     LA  + VHRDL  +N
Sbjct: 134 GLQVAKG------------------------------MKY-----LASKKFVHRDLAARN 158

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            +L   F           +K+ADFG AR + D
Sbjct: 159 CMLDEKF----------TVKVADFGLARDMYD 180

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 37/151 (24%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
            +E   LT L H+++V         + + +V E+   GDL  +L S G  ++        
Sbjct: 91  QREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL----AG 146

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD-LA--RIVHRDLKPQNI 129
               A     + +L                 + +  +   G   LA    VHRDL  +N 
Sbjct: 147 GEDVAPGPLGLGQL-----------------LAVASQVAAGMVYLAGLHFVHRDLATRNC 189

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+               +KI DFG +R +  
Sbjct: 190 LVGQGL----------VVKIGDFGMSRDIYS 210

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 62.7 bits (153), Expect = 1e-12
 Identities = 29/156 (18%), Positives = 56/156 (35%), Gaps = 50/156 (32%)

Query: 16  LKE---LTELHHENVVELLHC------KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDT 66
           L+E   + E  H +V +L+        K       +++ F   GDL  +L++     E+ 
Sbjct: 73  LREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRI-GENP 131

Query: 67  IRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDL 124
             + L+ +V+      +                        ME+     L+    +HRDL
Sbjct: 132 FNLPLQTLVRF--MVDIAC---------------------GMEY-----LSSRNFIHRDL 163

Query: 125 KPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
             +N +L+              + +ADFG +R +  
Sbjct: 164 AARNCMLAEDM----------TVCVADFGLSRKIYS 189

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 33/151 (21%), Positives = 52/151 (34%), Gaps = 50/151 (33%)

Query: 15  ILKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRI 69
           IL E   +  + + +V  LL  C      V L+ +    G L DY+   K  +    +  
Sbjct: 64  ILDEAYVMASVDNPHVCRLLGIC--LTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 121

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           +  QI + +                          YL        +  R+VHRDL  +N+
Sbjct: 122 WCVQIAKGMN-------------------------YL--------EDRRLVHRDLAARNV 148

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+               +KI DFG A+ L  
Sbjct: 149 LVK----------TPQHVKITDFGLAKLLGA 169

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 62.6 bits (152), Expect = 3e-12
 Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 50/150 (33%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIF 70
           L+E   + +  H ++V+L+     ++  V+++ME C  G+L  +L   K +L   ++ ++
Sbjct: 439 LQEALTMRQFDHPHIVKLIGVI--TENPVWIIMELCTLGELRSFLQVRKFSLDLASLILY 496

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             Q+  AL                          YL  E          VHRD+  +N+L
Sbjct: 497 AYQLSTALA-------------------------YL--ESKR------FVHRDIAARNVL 523

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +S           +  +K+ DFG +R+++D
Sbjct: 524 VS----------SNDCVKLGDFGLSRYMED 543

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 61.8 bits (150), Expect = 4e-12
 Identities = 37/151 (24%), Positives = 61/151 (40%), Gaps = 51/151 (33%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRI 69
           L+E   + +L HE +V+L      S++ +Y+V E+ + G L D+L  +    L    +  
Sbjct: 310 LQEAQVMKKLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVD 367

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
              QI   +                          Y+  E  N       VHRDL+  NI
Sbjct: 368 MAAQIASGMA-------------------------YV--ERMN------YVHRDLRAANI 394

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+           +++  K+ADFG AR ++D
Sbjct: 395 LVG----------ENLVCKVADFGLARLIED 415

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 61.5 bits (150), Expect = 4e-12
 Identities = 28/155 (18%), Positives = 52/155 (33%), Gaps = 49/155 (31%)

Query: 16  LKE---LTELHHENVVELLHC-----KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTI 67
           L E   + +  H NV+ LL        +      +++ F   GDL  YL+     +    
Sbjct: 84  LSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPK- 142

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA--RIVHRDLK 125
            I L+ +++      +                        ME+     L+    +HRDL 
Sbjct: 143 HIPLQTLLKF--MVDIAL---------------------GMEY-----LSNRNFLHRDLA 174

Query: 126 PQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            +N +L               + +ADFG ++ +  
Sbjct: 175 ARNCMLRDDM----------TVCVADFGLSKKIYS 199

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 61.1 bits (149), Expect = 4e-12
 Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 52/151 (34%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIF 70
           ++E   + +L +  +V L+  C+   + + LVME   GG L  +LV  +  +    +   
Sbjct: 58  MREAQIMHQLDNPYIVRLIGVCQA--EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL 115

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL-VMEFCNGGDLARIVHRDLKPQNI 129
           L Q+   +K                         YL    F         VHRDL  +N+
Sbjct: 116 LHQVSMGMK-------------------------YLEEKNF---------VHRDLAARNV 141

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LL                KI+DFG ++ L  
Sbjct: 142 LLV----------NRHYAKISDFGLSKALGA 162

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 61.6 bits (150), Expect = 5e-12
 Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 49/150 (32%)

Query: 16  LKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIF 70
           L E   +  L H+ +V+L     + + +Y++ EF   G L D+L S          +  F
Sbjct: 231 LAEANVMKTLQHDKLVKLHAVV-TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDF 289

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             QI + +                          ++  E  N       +HRDL+  NIL
Sbjct: 290 SAQIAEGMA-------------------------FI--EQRN------YIHRDLRAANIL 316

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +S            +  KIADFG AR ++D
Sbjct: 317 VS----------ASLVCKIADFGLARVIED 336

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 60.1 bits (145), Expect = 1e-11
 Identities = 18/168 (10%), Positives = 47/168 (27%), Gaps = 54/168 (32%)

Query: 4   QSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEF-------CNGGDLADYL 56
           +++    +    +     +      +++  +  ++ ++++  F        N     + L
Sbjct: 139 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 198

Query: 57  VSK----GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCN 112
           +S      +L          Q+++ L +     LHH                        
Sbjct: 199 LSHSSTHKSLVHHARLQLTLQVIRLLAS-----LHH------------------------ 229

Query: 113 GGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
                 +VH  L+P +I+L           Q   + +  F        
Sbjct: 230 ----YGLVHTYLRPVDIVLD----------QRGGVFLTGFEHLVRDGA 263

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 59.9 bits (145), Expect = 2e-11
 Identities = 48/185 (25%), Positives = 63/185 (34%), Gaps = 56/185 (30%)

Query: 15  ILKELTELHHENVVELL-HCKESDQHVYLVMEFCNGGDLADYLVSKGT------------ 61
           IL  +   HH NVV LL  C +    + +++EFC  G+L+ YL SK              
Sbjct: 78  ILIHIG--HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARF 135

Query: 62  -------------LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ------ 102
                        L      I   Q   +    + K L      E       D       
Sbjct: 136 RQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHL 195

Query: 103 -----HVYLVMEFCNGGDLA--RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA 155
                 V   MEF     LA  + +HRDL  +NILLS              +KI DFG A
Sbjct: 196 ICYSFQVAKGMEF-----LASRKCIHRDLAARNILLSEKN----------VVKICDFGLA 240

Query: 156 RFLQD 160
           R +  
Sbjct: 241 RDIYK 245

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 40.7 bits (95), Expect = 7e-05
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 10/95 (10%)

Query: 59  KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELL-HCKESDQHVYLVMEFCNGGDLA 117
           K   +    R  + ++ + L        HH NVV LL  C +    + +++EFC  G+L+
Sbjct: 61  KEGATHSEHRALMSEL-KILIHIG----HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 115

Query: 118 RIVHRDLKPQNILLSHSF----GKQYPQPQHIKLK 148
             +           +       GK Y     + LK
Sbjct: 116 TYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLK 150

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 59.8 bits (145), Expect = 2e-11
 Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 48/145 (33%)

Query: 19  LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIV 75
           + +L HE +V+L      S++ +Y+V E+ + G L D+L  +    L    +     QI 
Sbjct: 233 MKKLRHEKLVQLYAVV--SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 290

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
             +                          Y+  E  N       VHRDL+  NIL+    
Sbjct: 291 SGMA-------------------------YV--ERMN------YVHRDLRAANILVG--- 314

Query: 136 GKQYPQPQHIKLKIADFGFARFLQD 160
                  +++  K+ADFG AR ++D
Sbjct: 315 -------ENLVCKVADFGLARLIED 332

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 59.6 bits (144), Expect = 3e-11
 Identities = 33/151 (21%), Positives = 54/151 (35%), Gaps = 52/151 (34%)

Query: 16  LKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIF 70
           ++E   + +L +  +V L+  C    + + LVME   GG L  +LV  +  +    +   
Sbjct: 384 MREAQIMHQLDNPYIVRLIGVC--QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL 441

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL-VMEFCNGGDLARIVHRDLKPQNI 129
           L Q+   +K                         YL    F         VHR+L  +N+
Sbjct: 442 LHQVSMGMK-------------------------YLEEKNF---------VHRNLAARNV 467

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LL                KI+DFG ++ L  
Sbjct: 468 LLV----------NRHYAKISDFGLSKALGA 488

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 58.1 bits (140), Expect = 7e-11
 Identities = 16/164 (9%), Positives = 43/164 (26%), Gaps = 54/164 (32%)

Query: 4   QSKSSIVLTRHILKELTELHHENVVELLHCKESDQH-----VYLVMEFCN------GGDL 52
           +++    +    +     +      +++  +  ++       + +           G  L
Sbjct: 134 KNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVL 193

Query: 53  ADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCN 112
             +  +  +L          Q+++ L +     LHH                        
Sbjct: 194 LSHSSTHKSLVHHARLQLTLQVIRLLAS-----LHHYG---------------------- 226

Query: 113 GGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR 156
                 +VH  L+P +I+L           Q   + +  F    
Sbjct: 227 ------LVHTYLRPVDIVLD----------QRGGVFLTGFEHLV 254

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 52.6 bits (127), Expect = 5e-09
 Identities = 34/145 (23%), Positives = 56/145 (38%), Gaps = 57/145 (39%)

Query: 57  VSKGTLSEDTIRIFLKQI----VQALKAFQVK-----ELHHENVVELL-HCKESDQHVYL 106
           V KG L +    + LK+      Q ++ F+ +        H ++V L+  C E ++ + L
Sbjct: 55  VYKGVLRDGAK-VALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI-L 112

Query: 107 VMEFCNGGDL--------------------------AR---------IVHRDLKPQNILL 131
           + ++   G+L                          AR         I+HRD+K  NILL
Sbjct: 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL 172

Query: 132 SHSFGKQYPQPQHIKLKIADFGFAR 156
             +F      P     KI DFG ++
Sbjct: 173 DENF-----VP-----KITDFGISK 187

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 34/146 (23%), Positives = 48/146 (32%), Gaps = 57/146 (39%)

Query: 57  VSKGTLSEDTI------RIFLKQIVQALKAFQV-----KELHHENVVELL-HCKESDQHV 104
           V KG ++  T+       +      +  + F        +  HEN+VELL    + D   
Sbjct: 47  VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLC 106

Query: 105 YLVMEFCNGGDL-------------------------AR---------IVHRDLKPQNIL 130
            LV  +   G L                         A           +HRD+K  NIL
Sbjct: 107 -LVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANIL 165

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           L  +F            KI+DFG AR
Sbjct: 166 LDEAF-----TA-----KISDFGLAR 181

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 49.5 bits (119), Expect = 6e-08
 Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 52/150 (34%)

Query: 19  LTELHHENVVELL-HCKESDQHVYLVMEFCNGGDLADYL----VSKGTLSEDT-IRIFLK 72
           ++   H N++ L   C    + + LV  +   G +A  L     S+  L      RI   
Sbjct: 81  ISMAVHRNLLRLRGFCMTPTERL-LVYPYMANGSVASCLRERPESQPPLDWPKRQRI--- 136

Query: 73  QIVQALK--AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             + + +  A+    LH                       C+     +I+HRD+K  NIL
Sbjct: 137 -ALGSARGLAY----LHDH---------------------CD----PKIIHRDVKAANIL 166

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L   F     +       + DFG A+ +  
Sbjct: 167 LDEEF-----EA-----VVGDFGLAKLMDY 186

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 27/140 (19%), Positives = 50/140 (35%), Gaps = 43/140 (30%)

Query: 24  HENVVELL----HCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQA 77
             ++++LL    H   +  HV +V E   G +L   +       +    ++   KQ++  
Sbjct: 85  ANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLG 143

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L                +H +                    I+H D+KP+N+L+      
Sbjct: 144 LD--------------YMHRR------------------CGIIHTDIKPENVLMEIV--- 168

Query: 138 QYPQPQHIKLKIADFGFARF 157
                  I++KIAD G A +
Sbjct: 169 -DSPENLIQIKIADLGNACW 187

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 47.8 bits (114), Expect = 3e-07
 Identities = 36/151 (23%), Positives = 54/151 (35%), Gaps = 45/151 (29%)

Query: 15  ILKELTELHHEN---VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT--LSEDTIRI 69
           +L+ + +   E    +V L        H+ LV E     +L D L +     +S +  R 
Sbjct: 103 LLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRK 161

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           F +Q+  AL                L   E                   I+H DLKP+NI
Sbjct: 162 FAQQMCTALL--------------FLATPE-----------------LSIIHCDLKPENI 190

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LL +        P+   +KI DFG +  L  
Sbjct: 191 LLCN--------PKRSAIKIVDFGSSCQLGQ 213

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 46.6 bits (111), Expect = 7e-07
 Identities = 34/153 (22%), Positives = 52/153 (33%), Gaps = 51/153 (33%)

Query: 15  ILKELTELHHE---NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT----LSEDTI 67
           IL+ L +   +   NV+ +L       H+ +  E     +L + +  K       S   +
Sbjct: 146 ILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELL-SMNLYELI--KKNKFQGFSLPLV 202

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
           R F   I+Q L A     LH                               I+H DLKP+
Sbjct: 203 RKFAHSILQCLDA-----LHKNR----------------------------IIHCDLKPE 229

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           NILL         Q     +K+ DFG + +   
Sbjct: 230 NILLK--------QQGRSGIKVIDFGSSCYEHQ 254

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 45.5 bits (108), Expect = 1e-06
 Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 42/126 (33%)

Query: 31  LHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHEN 90
           L   +   + ++VME   G DL       GT  + T+     +++  L            
Sbjct: 118 LTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVL------------ 164

Query: 91  VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIA 150
             E +H  E                    VH D+K  N+LL +    Q        + +A
Sbjct: 165 --EYIHENE-------------------YVHGDIKAANLLLGYKNPDQ--------VYLA 195

Query: 151 DFGFAR 156
           D+G + 
Sbjct: 196 DYGLSY 201

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 44.2 bits (105), Expect = 5e-06
 Identities = 32/162 (19%), Positives = 53/162 (32%), Gaps = 52/162 (32%)

Query: 15  ILKELTELHHEN---VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT----LSEDTI 67
           +L+ L      +    V++L   E   H+ +V E   G    D++  K         D I
Sbjct: 64  VLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFI--KENGFLPFRLDHI 120

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
           R    QI +++       LH                              ++ H DLKP+
Sbjct: 121 RKMAYQICKSVNF-----LHS----------------------------NKLTHTDLKPE 147

Query: 128 NILLSHS---------FGKQYPQPQHIKLKIADFGFARFLQD 160
           NIL   S           +      +  +K+ DFG A +  +
Sbjct: 148 NILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE 189

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 27/148 (18%), Positives = 47/148 (31%), Gaps = 49/148 (33%)

Query: 26  NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT----LSEDTIRIFLKQIVQALKAF 81
             V +        H+ +  E   G +  ++L  K           +R    Q+  AL+  
Sbjct: 83  LCVLMSDWFNFHGHMCIAFELL-GKNTFEFL--KENNFQPYPLPHVRHMAYQLCHALRF- 138

Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS------- 134
               LH                              ++ H DLKP+NIL  +S       
Sbjct: 139 ----LHE----------------------------NQLTHTDLKPENILFVNSEFETLYN 166

Query: 135 --FGKQYPQPQHIKLKIADFGFARFLQD 160
                +    ++  +++ADFG A F  +
Sbjct: 167 EHKSCEEKSVKNTSIRVADFGSATFDHE 194

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 32/167 (19%), Positives = 54/167 (32%), Gaps = 57/167 (34%)

Query: 15  ILKELTELHHE--NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT----LSEDTIR 68
           ILK++        N+V+         H+ L+ E   G  L + +            + I+
Sbjct: 84  ILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEII--TRNNYNGFHIEDIK 140

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
           ++  +I++AL       L                                + H DLKP+N
Sbjct: 141 LYCIEILKALNY-----LRK----------------------------MSLTHTDLKPEN 167

Query: 129 ILLSHSF---------------GKQYPQPQHIKLKIADFGFARFLQD 160
           ILL   +                 Q  + +   +K+ DFG A F  D
Sbjct: 168 ILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD 214

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 45/146 (30%)

Query: 14  HILKELTELHHENVVELLHC-KESDQHVYLVMEFCNGGDLADYLV--SKGTLSEDTIRIF 70
           +  K+L       +   +      D++ +LV+    G  L   L    K  LSE ++   
Sbjct: 106 NKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQV 164

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
             +++ AL              E LH  E                    VH ++  +NI 
Sbjct: 165 ACRLLDAL--------------EFLHENE-------------------YVHGNVTAENIF 191

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFAR 156
           +              ++ +A +GFA 
Sbjct: 192 VD--------PEDQSQVTLAGYGFAF 209

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 41.0 bits (95), Expect = 6e-05
 Identities = 27/135 (20%), Positives = 46/135 (34%), Gaps = 43/135 (31%)

Query: 36  SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELL 95
            D  +++V+EF  GG   + + +K   S  T +  L Q+  +L   +             
Sbjct: 133 KDDQLFIVLEFEFGGIDLEQMRTK-LSSLATAKSILHQLTASLAVAE------------- 178

Query: 96  HCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF---------GKQYPQPQH-I 145
                                 R  HRDL   N+LL  +          GK    P   +
Sbjct: 179 -------------------ASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGL 219

Query: 146 KLKIADFGFARFLQD 160
           ++ I D+  +R  +D
Sbjct: 220 QVSIIDYTLSRLERD 234

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 40.5 bits (95), Expect = 8e-05
 Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 43/127 (33%)

Query: 31  LHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELHHE 89
           LH K    + +++M+   G DL     +     S  T+     +I+  L           
Sbjct: 118 LHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDIL----------- 165

Query: 90  NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKI 149
              E +H  E                    VH D+K  N+LL++    Q        + +
Sbjct: 166 ---EYIHEHE-------------------YVHGDIKASNLLLNYKNPDQ--------VYL 195

Query: 150 ADFGFAR 156
            D+G A 
Sbjct: 196 VDYGLAY 202

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 40.4 bits (95), Expect = 8e-05
 Identities = 27/144 (18%), Positives = 47/144 (32%), Gaps = 42/144 (29%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLK 72
              K L       +  + +  +   H  LV++   G  L D L   G   S  T+ +  K
Sbjct: 57  RTYKLLAGCTG--IPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAK 113

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           Q++  +              + +H K                    +V+RD+KP N L+ 
Sbjct: 114 QMLARV--------------QSIHEK-------------------SLVYRDIKPDNFLIG 140

Query: 133 HSFGKQYPQPQHIKLKIADFGFAR 156
               K         + + DFG  +
Sbjct: 141 RPNSK-----NANMIYVVDFGMVK 159

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 37.7 bits (88), Expect = 6e-04
 Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 40/133 (30%)

Query: 25  ENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQV 83
           + + ++ +     ++  +V+E   G  L D       T S  T+ +   Q++  +     
Sbjct: 65  DGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRM----- 118

Query: 84  KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQ 143
                    E +H K                    +++RD+KP+N L+      +     
Sbjct: 119 ---------EYVHSK-------------------NLIYRDVKPENFLIG-----RPGNKT 145

Query: 144 HIKLKIADFGFAR 156
              + I DF  A+
Sbjct: 146 QQVIHIIDFALAK 158

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	160
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.91
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.9
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.9
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.89
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.89
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.89
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.89
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.89
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.89
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.88
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.88
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.88
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.87
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.85
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.84
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.83
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.82
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.82
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.81
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.81
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.77
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.75
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.75
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.75
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.74
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.74
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.74
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.74
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.74
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.74
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.74
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.73
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.73
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.73
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.73
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.72
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.72
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.72
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.72
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.72
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.72
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.72
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.72
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.72
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.72
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.71
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.71
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.71
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.71
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.71
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.71
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.71
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.71
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.71
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.71
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.7
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.7
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.7
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.7
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.7
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.7
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.7
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.7
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.7
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.69
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.69
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.69
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.69
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.69
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.69
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.69
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.69
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.69
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.69
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.69
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.69
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.69
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.69
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.69
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.69
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.69
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.69
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.69
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.69
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.68
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.68
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.68
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.68
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.68
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.68
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.68
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.68
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.68
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.68
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.68
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.68
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.68
3niz_A	311	Rhodanese family protein; structural genomics, str	99.68
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.68
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.67
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.67
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.67
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.67
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.67
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.67
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.67
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.67
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.67
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.67
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.67
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.67
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.67
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.67
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.67
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.67
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.67
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.66
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.66
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.66
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.66
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.66
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.66
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.66
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.66
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.66
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.66
3bhy_A	283	Death-associated protein kinase 3; death associate	99.66
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.66
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.66
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.66
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.66
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.66
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.66
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.65
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.65
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.65
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.65
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.65
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.65
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.65
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.65
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.65
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.65
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.65
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.65
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.65
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.65
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.65
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.65
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.64
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.64
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.64
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.64
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.64
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.64
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.64
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.64
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.64
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.64
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.64
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.63
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.63
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.63
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.63
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.63
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.63
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.63
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.63
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.63
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.63
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.63
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.63
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.63
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.63
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.62
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.62
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.62
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.62
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.62
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.62
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.62
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.62
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.61
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.61
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.61
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.61
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.61
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.61
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.61
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.61
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.6
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.6
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.6
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.6
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.6
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.6
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.6
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.6
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.59
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.59
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.59
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.59
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.58
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.58
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.58
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.58
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.58
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.57
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.57
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.57
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.57
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.57
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.57
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.56
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.56
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.56
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.56
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.56
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.56
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.55
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.55
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.55
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.54
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.54
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.54
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.54
3uqc_A	286	Probable conserved transmembrane protein; structur	99.54
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.54
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.54
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.53
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.53
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.53
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.53
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.53
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.53
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.52
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.52
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.52
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.51
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.5
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.5
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.49
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.49
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.46
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.45
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.44
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.44
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.44
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.42
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.42
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.4
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.39
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.1
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	98.99
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	98.55
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	98.5
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	98.4
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	98.21
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	98.19
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	98.15
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	98.13
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	98.12
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	98.11
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	98.06
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	98.01
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	97.95
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	97.87
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	97.84
4aoj_A	329	High affinity nerve growth factor receptor; transf	97.73
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	97.71
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	97.68
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	97.67
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	97.54
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	97.41
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	97.38
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	97.36
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	97.33
3uqc_A	286	Probable conserved transmembrane protein; structur	97.32
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	97.31
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	97.27
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	97.25
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	97.18
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	97.15
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	97.14
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	97.13
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	97.1
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	97.08
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	97.07
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	97.06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	97.06
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	96.99
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	96.93
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	96.93
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	96.91
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	96.91
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	96.9
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	96.9
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	96.89
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	96.88
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	96.87
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	96.86
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	96.85
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	96.85
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	96.83
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	96.82
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	96.8
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	96.8
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	96.79
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	96.78
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	96.77
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	96.76
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	96.76
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	96.75
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	96.75
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	96.73
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	96.72
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	96.71
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	96.69
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	96.67
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	96.67
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	96.65
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	96.65
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	96.65
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	96.64
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	96.63
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	96.62
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	96.61
3bhy_A	283	Death-associated protein kinase 3; death associate	96.58
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	96.58
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	96.56
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	96.55
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	96.55
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	96.52
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	96.51
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	96.48
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	96.45
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	96.44
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	96.42
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	96.42
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	96.41
3ork_A	311	Serine/threonine protein kinase; structural genomi	96.41
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	96.39
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	96.37
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	96.36
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	96.35
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	96.34
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	96.3
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	96.29
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	96.26
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	96.26
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	96.26
3o0g_A	292	Cell division protein kinase 5; kinase activator c	96.23
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	96.21
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	96.2
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	96.19
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	96.18
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	96.17
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	96.16
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	96.16
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	96.13
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	96.13
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	96.12
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	96.12
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.12
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	96.12
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	96.11
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	96.1
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	96.1
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	96.1
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	96.05
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	96.03
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	96.01
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	95.99
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	95.98
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	95.96
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	95.96
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	95.95
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	95.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	95.87
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	95.81
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	95.8
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	95.77
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	95.76
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	95.74
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	95.73
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	95.72
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	95.7
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	95.68
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	95.67
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	95.65
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	95.65
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	95.6
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	95.59
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	95.58
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	95.56
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	95.49
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	95.43
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	95.39
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	95.35
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	95.32
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	95.3
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	95.29
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	95.28
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	95.25
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	95.24
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	95.22
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	95.21
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	95.17
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	95.16
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	95.14
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	95.12
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	95.08
3niz_A	311	Rhodanese family protein; structural genomics, str	95.06
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	95.02
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	94.98
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	94.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	94.95
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	94.89
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	94.86
3fme_A	290	Dual specificity mitogen-activated protein kinase;	94.83
2a19_B	284	Interferon-induced, double-stranded RNA-activated	94.81
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	94.81
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	94.81
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	94.79
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	94.77
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	94.7
3rp9_A	458	Mitogen-activated protein kinase; structural genom	94.65
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	94.63
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	94.63
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	94.62
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	94.57
3an0_A	340	Dual specificity mitogen-activated protein kinase;	94.54
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	94.52
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	94.49
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	94.43
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	94.39
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	94.38
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	94.33
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	94.25
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	94.25
3soc_A	322	Activin receptor type-2A; structural genomics cons	94.22
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	94.22
3pls_A	298	Macrophage-stimulating protein receptor; protein k	94.21
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	94.12
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	94.11
3aln_A	327	Dual specificity mitogen-activated protein kinase;	94.09
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	93.95
2dyl_A	318	Dual specificity mitogen-activated protein kinase	93.92
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	93.9
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	93.84
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	93.83
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	93.83
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	93.83
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	93.77
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	93.77
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	93.73
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	93.71
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	93.64
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	93.6
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	93.59
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	93.54
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	93.51
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	93.49
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	93.48
3q4u_A	301	Activin receptor type-1; structural genomics conso	93.46
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	93.43
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	93.38
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	93.34
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	93.31
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	93.09
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	93.03
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	92.91
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	92.86
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	92.84
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	92.81
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	92.8
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	92.78
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	92.72
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	92.63
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	92.46
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	92.43
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	92.17
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	92.04
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	91.98
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	91.68
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	91.55
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	91.45
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	91.22
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	91.03
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	91.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	90.86
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	90.81
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	90.59
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	90.36
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	90.24
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	90.16
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	89.99
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	89.8
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	89.52
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	89.09

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.91  E-value=3.9e-25  Score=168.19  Aligned_cols=109  Identities=31%  Similarity=0.588  Sum_probs=99.9

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+..+.+|+++|+.++||||+++++++++++.+|+||||++||+|.+++...+.+++...+.++.|++.++.++|..  
T Consensus        74 ~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~--  151 (311)
T 4aw0_A           74 NKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK--  151 (311)
T ss_dssp             TCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            456678899999999999999999999999999999999999999999988888999999999999999999998864  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++||||||+|||++.+          +.+||+|||+|+.+
T Consensus       152 -------------------------------~IiHRDlKPeNILl~~~----------g~vKl~DFGla~~~  182 (311)
T 4aw0_A          152 -------------------------------GIIHRDLKPENILLNED----------MHIQITDFGTAKVL  182 (311)
T ss_dssp             -------------------------------TEECSCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             -------------------------------CCccCCCCHHHeEEcCC----------CCEEEEEcCCceec
Confidence                                           68999999999999854          37999999999865

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.90  E-value=4.5e-24  Score=164.73  Aligned_cols=112  Identities=34%  Similarity=0.574  Sum_probs=98.2

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      +......+++|+++++.|+|||||++++++.+++.+|+||||++||+|.+++..+  ..+++.....++.|++.++.++|
T Consensus        63 ~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH  142 (350)
T 4b9d_A           63 SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH  142 (350)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3455678899999999999999999999999999999999999999999988644  34688889999999999999988


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                      ..                                 +++||||||+|||++.+          +.+||+|||+|+.+.
T Consensus       143 ~~---------------------------------~IiHRDlKp~NILl~~~----------g~vKl~DFGla~~~~  176 (350)
T 4b9d_A          143 DR---------------------------------KILHRDIKSQNIFLTKD----------GTVQLGDFGIARVLN  176 (350)
T ss_dssp             HT---------------------------------TCEETTCCGGGEEECTT----------CCEEECSTTEESCCC
T ss_pred             HC---------------------------------CeeeccCCHHHEEECCC----------CCEEEcccccceeec
Confidence            63                                 68999999999999854          379999999998653

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.90  E-value=3.6e-24  Score=162.30  Aligned_cols=111  Identities=26%  Similarity=0.424  Sum_probs=97.5

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-------------cCCCHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-------------GTLSEDTIRIFL   71 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-------------~~~~~~~~~~~~   71 (160)
                      +......+.+|++++++++|||||++++++.+++.+|+||||+++|+|.+++..+             ..+++.....+.
T Consensus        55 ~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~  134 (299)
T 4asz_A           55 SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA  134 (299)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHH
Confidence            4455678899999999999999999999999999999999999999999887543             357888999999


Q ss_pred             HHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEee
Q psy11428         72 KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIAD  151 (160)
Q Consensus        72 ~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~d  151 (160)
                      .+++.++.++|..                                 +++||||||+|||++.+          ..+||+|
T Consensus       135 ~qia~gl~yLH~~---------------------------------~iiHRDlKp~NILl~~~----------~~~Ki~D  171 (299)
T 4asz_A          135 QQIAAGMVYLASQ---------------------------------HFVHRDLATRNCLVGEN----------LLVKIGD  171 (299)
T ss_dssp             HHHHHHHHHHHHT---------------------------------TCCCSCCSGGGEEECGG----------GCEEECC
T ss_pred             HHHHHHHHHHHhC---------------------------------CcccCccCHhhEEECCC----------CcEEECC
Confidence            9999999998853                                 68999999999999854          4899999


Q ss_pred             eeccccc
Q psy11428        152 FGFARFL  158 (160)
Q Consensus       152 fg~a~~~  158 (160)
                      ||+|+..
T Consensus       172 FGla~~~  178 (299)
T 4asz_A          172 FGMSRDV  178 (299)
T ss_dssp             CSCHHHH
T ss_pred             cccceec
Confidence            9999754

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.89  E-value=8.5e-24  Score=159.61  Aligned_cols=114  Identities=29%  Similarity=0.441  Sum_probs=97.2

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeec----CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~----~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      +......+++|+++++.++|||||++++++.+    +..+|+||||++||+|.+++...+.+++.....++.+++.++.+
T Consensus        65 ~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~y  144 (290)
T 3fpq_A           65 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQF  144 (290)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence            45566788999999999999999999998864    35689999999999999998877889999999999999999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|...                               .+++||||||+|||++..         ++.+||+|||+|+..
T Consensus       145 lH~~~-------------------------------~~IiHRDlKp~NILl~~~---------~g~vKl~DFGla~~~  182 (290)
T 3fpq_A          145 LHTRT-------------------------------PPIIHRDLKCDNIFITGP---------TGSVKIGDLGLATLK  182 (290)
T ss_dssp             HHTSS-------------------------------SCCCCCCCCGGGEEESST---------TSCEEECCTTGGGGC
T ss_pred             HHHCC-------------------------------CCEEecccChhheeEECC---------CCCEEEEeCcCCEeC
Confidence            87531                               138999999999999732         237999999999754

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.89  E-value=2.4e-24  Score=163.54  Aligned_cols=106  Identities=31%  Similarity=0.542  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ..+.+|+++++.++|||||++++++.+++.+|+||||++||+|.+++...+.+++..+..++.+++.++.++|..     
T Consensus        71 ~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~-----  145 (304)
T 3ubd_A           71 VRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL-----  145 (304)
T ss_dssp             C------CCCCCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            356779999999999999999999999999999999999999999988888899999999999999999998863     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++||||||+|||++.+          +.+||+|||+|+..
T Consensus       146 ----------------------------~IiHRDlKp~NILl~~~----------g~vKl~DFGla~~~  176 (304)
T 3ubd_A          146 ----------------------------GIIYRDLKPENILLDEE----------GHIKLTDFGLSKES  176 (304)
T ss_dssp             ----------------------------TCCCSSCCGGGEEECTT----------SCEEEESSEEEEC-
T ss_pred             ----------------------------CCcCCCCCHHHeEEcCC----------CCEEecccccceec
Confidence                                        68999999999999854          37999999999754

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.89  E-value=1.6e-23  Score=160.69  Aligned_cols=111  Identities=27%  Similarity=0.416  Sum_probs=93.1

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee---------------ecCCCHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS---------------KGTLSEDTIRI   69 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~---------------~~~~~~~~~~~   69 (160)
                      +......+.+|++++++++|||||++++++.+...+|+||||+++|+|.+++..               .+.+++.....
T Consensus        83 ~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~  162 (329)
T 4aoj_A           83 SESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLA  162 (329)
T ss_dssp             SHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHH
Confidence            455667899999999999999999999999999999999999999999877643               24578888999


Q ss_pred             HHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEE
Q psy11428         70 FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKI  149 (160)
Q Consensus        70 ~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l  149 (160)
                      +..+++.++.++|..                                 +++||||||+|||++.+          ..+||
T Consensus       163 i~~qia~gl~yLH~~---------------------------------~iiHRDLKp~NILl~~~----------~~~Ki  199 (329)
T 4aoj_A          163 VASQVAAGMVYLAGL---------------------------------HFVHRDLATRNCLVGQG----------LVVKI  199 (329)
T ss_dssp             HHHHHHHHHHHHHHT---------------------------------TCCCSCCCGGGEEEETT----------TEEEE
T ss_pred             HHHHHHHHHHHHhcC---------------------------------CeecccccHhhEEECCC----------CcEEE
Confidence            999999999998753                                 68999999999999854          48999


Q ss_pred             eeeeccccc
Q psy11428        150 ADFGFARFL  158 (160)
Q Consensus       150 ~dfg~a~~~  158 (160)
                      +|||+|+.+
T Consensus       200 ~DFGla~~~  208 (329)
T 4aoj_A          200 GDFGMSRDI  208 (329)
T ss_dssp             CCCC-----
T ss_pred             cccccceec
Confidence            999999854

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.89  E-value=5.4e-24  Score=163.53  Aligned_cols=105  Identities=30%  Similarity=0.456  Sum_probs=94.3

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCcee
Q psy11428         13 RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVV   92 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv   92 (160)
                      .+|+++++.++|||||++++++.+++.+|+||||++||+|.+++...+.+++.....++.+++.++.++|..        
T Consensus        98 ~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~--------  169 (336)
T 4g3f_A           98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR--------  169 (336)
T ss_dssp             THHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT--------
T ss_pred             HHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--------
Confidence            469999999999999999999999999999999999999999988888899999999999999999998853        


Q ss_pred             EEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         93 ELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        93 ~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                               +++||||||+|||++.++         ..+||+|||+|+.+.
T Consensus       170 -------------------------~IiHRDlKp~NILl~~~g---------~~vKl~DFGla~~~~  202 (336)
T 4g3f_A          170 -------------------------RILHGDVKADNVLLSSDG---------SRAALCDFGHALCLQ  202 (336)
T ss_dssp             -------------------------TEECSCCCGGGEEECTTS---------CCEEECCCTTCEEC-
T ss_pred             -------------------------CceecccCHHHEEEeCCC---------CEEEEeeCCCCeEcc
Confidence                                     689999999999998543         258999999998653

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.89  E-value=1.4e-23  Score=157.29  Aligned_cols=108  Identities=33%  Similarity=0.621  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++||||+++++++.+++.+|+||||+ +|++.+++..++.+++.....++.|++.++.++|..   
T Consensus        56 ~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---  131 (275)
T 3hyh_A           56 MQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---  131 (275)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            3556889999999999999999999999999999999998 678888887788899999999999999999998864   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                    +++||||||+||+++.+          +.+||+|||+|+...
T Consensus       132 ------------------------------~IiHRDiKP~NILl~~~----------~~vkl~DFGla~~~~  163 (275)
T 3hyh_A          132 ------------------------------KIVHRDLKPENLLLDEH----------LNVKIADFGLSNIMT  163 (275)
T ss_dssp             ------------------------------TCCCCCCCTTTEEECTT----------CCEEECCSSCC----
T ss_pred             ------------------------------CcccccCChHHeEECCC----------CCEEEeecCCCeecC
Confidence                                          68999999999999854          379999999997643

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.89  E-value=1e-23  Score=162.52  Aligned_cols=106  Identities=31%  Similarity=0.566  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ..+.+|+++|+.++|||||++++++.+++.+|+||||++||+|.+++. ++.+++..+..++.+++.++.++|..     
T Consensus       116 ~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~~~l~-~~~l~e~~~~~~~~qi~~aL~ylH~~-----  189 (346)
T 4fih_A          116 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQ-----  189 (346)
T ss_dssp             GGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            456789999999999999999999999999999999999999988764 46799999999999999999998863     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                  +++||||||+|||++.+          +.+||+|||+|+.+.
T Consensus       190 ----------------------------~IiHRDlKp~NILl~~~----------g~vKl~DFGla~~~~  221 (346)
T 4fih_A          190 ----------------------------GVIHRDIKSDSILLTHD----------GRVKLSDFGFCAQVS  221 (346)
T ss_dssp             ----------------------------TEECCCCSGGGEEECTT----------CCEEECCCTTCEECC
T ss_pred             ----------------------------CcccccCCHHHEEECCC----------CCEEEecCcCceecC
Confidence                                        68999999999999854          379999999998653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.88  E-value=3.6e-23  Score=157.31  Aligned_cols=110  Identities=24%  Similarity=0.411  Sum_probs=95.4

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      +......+++|++++++++|||||++++++. ++.+|+||||++||+|.+++.. .+.+++.....++.+++.++.++|.
T Consensus        72 ~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~  150 (307)
T 3omv_A           72 TPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA  150 (307)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            4566788999999999999999999999775 4678999999999999988754 3568999999999999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++||||||+|||++.+          ..+||+|||+|+..
T Consensus       151 ~---------------------------------~IiHRDlKp~NILl~~~----------~~~Ki~DFGla~~~  182 (307)
T 3omv_A          151 K---------------------------------NIIHRDMKSNNIFLHEG----------LTVKIGDFGLATVK  182 (307)
T ss_dssp             T---------------------------------TCBCSCCCSSSEEEETT----------EEEEECCCSSCBC-
T ss_pred             C---------------------------------CccCCccCHHHEEECCC----------CcEEEeeccCceec
Confidence            3                                 68999999999999854          48999999999754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.88  E-value=2.6e-23  Score=163.91  Aligned_cols=106  Identities=31%  Similarity=0.566  Sum_probs=94.9

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ..+.+|+++|+.++|||||++++++.+++.+|+||||++||+|.+++. .+.+++..+..++.+++.++.++|..     
T Consensus       193 ~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~~~i~-~~~l~e~~~~~~~~qil~aL~ylH~~-----  266 (423)
T 4fie_A          193 ELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLQALSVLHAQ-----  266 (423)
T ss_dssp             GGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHH-HSCCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            456789999999999999999999999999999999999999988764 56789999999999999999998863     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                  +++||||||+|||++.+          +.+||+|||+|+.+.
T Consensus       267 ----------------------------~IiHRDiKp~NILl~~~----------g~vKl~DFGla~~~~  298 (423)
T 4fie_A          267 ----------------------------GVIHRDIKSDSILLTHD----------GRVKLSDFGFCAQVS  298 (423)
T ss_dssp             ----------------------------TEECCCCSTTTEEECTT----------CCEEECCCTTCEECC
T ss_pred             ----------------------------CeecccCCHHHEEEcCC----------CCEEEecCccceECC
Confidence                                        68999999999999854          379999999998653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.88  E-value=4.3e-23  Score=156.98  Aligned_cols=109  Identities=29%  Similarity=0.479  Sum_probs=94.9

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee----------------ecCCCHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS----------------KGTLSEDTIRIF   70 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~----------------~~~~~~~~~~~~   70 (160)
                      .....+++|++++++++|||||++++++..++.+|+|+||+++|+|.+++..                .+.+++.....+
T Consensus        71 ~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  150 (308)
T 4gt4_A           71 PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL  150 (308)
T ss_dssp             -CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHH
Confidence            3456789999999999999999999999999999999999999999888742                245778888899


Q ss_pred             HHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEe
Q psy11428         71 LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIA  150 (160)
Q Consensus        71 ~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~  150 (160)
                      +.+++.++.++|..                                 +++||||||+|||++.+          ..+||+
T Consensus       151 ~~qia~gl~yLH~~---------------------------------~iiHRDLK~~NILl~~~----------~~~Ki~  187 (308)
T 4gt4_A          151 VAQIAAGMEYLSSH---------------------------------HVVHKDLATRNVLVYDK----------LNVKIS  187 (308)
T ss_dssp             HHHHHHHHHHHHHT---------------------------------TCCCSCCSGGGEEECGG----------GCEEEC
T ss_pred             HHHHHHHHHHHHhC---------------------------------CCCCCCccccceEECCC----------CCEEEC
Confidence            99999999998863                                 58999999999999854          489999


Q ss_pred             eeeccccc
Q psy11428        151 DFGFARFL  158 (160)
Q Consensus       151 dfg~a~~~  158 (160)
                      |||+|+.+
T Consensus       188 DFGlar~~  195 (308)
T 4gt4_A          188 DLGLFREV  195 (308)
T ss_dssp             CSCCBCGG
T ss_pred             Ccccceec
Confidence            99999854

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.87  E-value=1e-22  Score=154.29  Aligned_cols=110  Identities=25%  Similarity=0.451  Sum_probs=89.2

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCC------------cEEEEEEEeCCCceeEEEeeecCCC---HHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQ------------HVYLVMEFCNGGDLADYLVSKGTLS---EDTIRIF   70 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~------------~~~lv~e~~~~g~l~~~l~~~~~~~---~~~~~~~   70 (160)
                      +.....+.+|+++|+.++|||||++++++.+.+            .+|++|||+++|+|.+++..++..+   ......+
T Consensus        44 ~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i  123 (299)
T 4g31_A           44 ELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI  123 (299)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHH
Confidence            344567889999999999999999999887544            3799999999999998876655443   3456778


Q ss_pred             HHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEe
Q psy11428         71 LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIA  150 (160)
Q Consensus        71 ~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~  150 (160)
                      +.++++++.++|..                                 +++||||||+||+++.+          +.+||+
T Consensus       124 ~~qi~~al~ylH~~---------------------------------~IiHRDlKp~NILl~~~----------~~vKl~  160 (299)
T 4g31_A          124 FLQIAEAVEFLHSK---------------------------------GLMHRDLKPSNIFFTMD----------DVVKVG  160 (299)
T ss_dssp             HHHHHHHHHHHHHT---------------------------------TCCCCCCCGGGEEECTT----------CCEEEC
T ss_pred             HHHHHHHHHHHHHC---------------------------------cCccccCcHHHeEECCC----------CcEEEc
Confidence            89999999998863                                 68999999999999854          379999


Q ss_pred             eeeccccc
Q psy11428        151 DFGFARFL  158 (160)
Q Consensus       151 dfg~a~~~  158 (160)
                      |||+|+.+
T Consensus       161 DFGla~~~  168 (299)
T 4g31_A          161 DFGLVTAM  168 (299)
T ss_dssp             CCCCC---
T ss_pred             cCccceec
Confidence            99999865

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.85  E-value=7.8e-22  Score=162.70  Aligned_cols=110  Identities=26%  Similarity=0.416  Sum_probs=98.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+..++.++++++.++|||||+++++|++...+|+||||++||+|..++...+.+++..++.++.+++.++.++|..  
T Consensus       234 ~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~--  311 (689)
T 3v5w_A          234 TLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR--  311 (689)
T ss_dssp             HHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            345566777888889999999999999999999999999999999999988888899999999999999999998853  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                     +++||||||+|||++.+          +.+||+|||+|+.+.
T Consensus       312 -------------------------------gIiHRDLKPeNILld~~----------G~vKL~DFGlA~~~~  343 (689)
T 3v5w_A          312 -------------------------------FVVYRDLKPANILLDEH----------GHVRISDLGLACDFS  343 (689)
T ss_dssp             -------------------------------TEECCCCSGGGEEECTT----------SCEEECCCTTCEECS
T ss_pred             -------------------------------CccccCCchHHeEEeCC----------CCEEecccceeeecC
Confidence                                           68999999999999854          489999999997653

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.84  E-value=1.6e-21  Score=150.78  Aligned_cols=110  Identities=34%  Similarity=0.495  Sum_probs=92.7

Q ss_pred             hhHHHHHHHHHHHHhhcCC-cceEEEeeeeec-CCcEEEEEEEeCCCceeEEEeee----------------cCCCHHHH
Q psy11428          6 KSSIVLTRHILKELTELHH-ENVVELLHCKES-DQHVYLVMEFCNGGDLADYLVSK----------------GTLSEDTI   67 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h-~~iv~l~~~~~~-~~~~~lv~e~~~~g~l~~~l~~~----------------~~~~~~~~   67 (160)
                      .+....+.+|+++|++++| ||||++++++.. +..+|+||||+++|+|.+++...                ..+++...
T Consensus       108 ~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~  187 (353)
T 4ase_A          108 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL  187 (353)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHH
T ss_pred             hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHH
Confidence            4456678899999999965 899999998865 46799999999999999887532                33678888


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceE
Q psy11428         68 RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKL  147 (160)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~  147 (160)
                      ..+..+++.++.++|..                                 +++||||||+|||++.+          ..+
T Consensus       188 ~~~~~qia~gl~yLH~~---------------------------------~iiHRDLK~~NILl~~~----------~~v  224 (353)
T 4ase_A          188 ICYSFQVAKGMEFLASR---------------------------------KCIHRDLAARNILLSEK----------NVV  224 (353)
T ss_dssp             HHHHHHHHHHHHHHHHT---------------------------------TCCCSCCSGGGEEECGG----------GCE
T ss_pred             HHHHHHHHHHHHhHhhC---------------------------------CeecCccCccceeeCCC----------CCE
Confidence            88999999999998763                                 68999999999999854          489


Q ss_pred             EEeeeeccccc
Q psy11428        148 KIADFGFARFL  158 (160)
Q Consensus       148 ~l~dfg~a~~~  158 (160)
                      ||+|||+|+.+
T Consensus       225 Ki~DFGlar~~  235 (353)
T 4ase_A          225 KICDFGLARDI  235 (353)
T ss_dssp             EECCCGGGSCT
T ss_pred             EECcchhhhhc
Confidence            99999999865

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.83  E-value=3.1e-21  Score=157.47  Aligned_cols=107  Identities=22%  Similarity=0.293  Sum_probs=93.1

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+++|+++|+++ .|+||++++++++++...|+||||++|++|.+.+...+.+++.   .++.+++.++.++|.. 
T Consensus       283 ~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~ylH~~-  358 (569)
T 4azs_A          283 RNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAALEKQ-  358 (569)
T ss_dssp             HHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHHHHHC-
Confidence            3445688999999999 7999999999999999999999999999999998877777654   3678999999998864 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      +++||||||+|||++.+          +.+||+|||+|+.+.
T Consensus       359 --------------------------------GIIHRDIKPeNILL~~d----------g~vKL~DFGlAr~~~  390 (569)
T 4azs_A          359 --------------------------------GFWHDDVRPWNVMVDAR----------QHARLIDFGSIVTTP  390 (569)
T ss_dssp             --------------------------------TCEESCCCGGGEEECTT----------SCEEECCCTTEESCC
T ss_pred             --------------------------------CceeccCchHhEEECCC----------CCEEEeecccCeeCC
Confidence                                            79999999999999854          379999999997553

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.82  E-value=8.7e-21  Score=148.84  Aligned_cols=108  Identities=33%  Similarity=0.566  Sum_probs=93.3

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeee------cCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKE------SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~------~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      .....+.+|+++|+.++|||||++++++.      +...+|+||||++ |++..++...+.+++..++.++.|++.++.+
T Consensus        95 ~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~y  173 (398)
T 4b99_A           95 TNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY  173 (398)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence            34556778999999999999999999865      3467999999996 6788888778889999999999999999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..                                 +++||||||+||+++.+          +.+|++|||+|+.+
T Consensus       174 lH~~---------------------------------~iiHRDlKP~NIl~~~~----------~~~Ki~DFGla~~~  208 (398)
T 4b99_A          174 MHSA---------------------------------QVIHRDLKPSNLLVNEN----------CELKIGDFGMARGL  208 (398)
T ss_dssp             HHHT---------------------------------TCBCCCCCGGGEEECTT----------CCEEECCCTTCBCC
T ss_pred             HHHC---------------------------------cCcCCCcCccccccCCC----------CCEEEeecceeeec
Confidence            8864                                 68999999999999854          37999999999865

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.82  E-value=1.8e-20  Score=145.35  Aligned_cols=105  Identities=30%  Similarity=0.449  Sum_probs=91.9

Q ss_pred             HHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ......|+++|+.+ +||||+++++++.+++.+|+||||+++|++.+++   +.+++..++.++.|++.++.++|..   
T Consensus        63 ~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~---~~l~~~~~~~~~~qll~al~ylH~~---  136 (361)
T 4f9c_A           63 PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQF---  136 (361)
T ss_dssp             HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCCCcccHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34567899999888 6999999999999999999999999999998765   4588999999999999999998863   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++||||||+|||++.+.         +.+||+|||+|+..
T Consensus       137 ------------------------------gIiHRDiKPeNiLl~~~~---------~~~kl~DFGla~~~  168 (361)
T 4f9c_A          137 ------------------------------GIVHRDVKPSNFLYNRRL---------KKYALVDFGLAQGT  168 (361)
T ss_dssp             ------------------------------TEECSCCSGGGEEEETTT---------TEEEECCCTTCEEC
T ss_pred             ------------------------------CeEeCcCCHHHeEEeCCC---------CeEEECcCCCCccc
Confidence                                          689999999999998542         37899999999754

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.81  E-value=2.7e-20  Score=152.03  Aligned_cols=112  Identities=29%  Similarity=0.523  Sum_probs=97.4

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+++|+++|+.++||||+++++++.+...+|++|||++||+|.+++.. .+.+++..+..++.|++.++.++|.. 
T Consensus       196 ~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~-  274 (573)
T 3uto_A          196 SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN-  274 (573)
T ss_dssp             HHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3445678899999999999999999999999999999999999999887754 35789999999999999999998863 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      +++||||||+|++++.+        ..+.+||+|||+|+.+.
T Consensus       275 --------------------------------~iiHRDlKp~Nill~~~--------~~~~vKl~DFG~a~~~~  308 (573)
T 3uto_A          275 --------------------------------NYVHLDLKPENIMFTTK--------RSNELKLIDFGLTAHLD  308 (573)
T ss_dssp             --------------------------------TEECCCCCGGGEEESSS--------SCCCEEECCCSSCEECC
T ss_pred             --------------------------------CeeeccCChhhccccCC--------CCCCEEEeeccceeEcc
Confidence                                            68999999999999743        23478999999998754

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.81  E-value=1.7e-20  Score=142.30  Aligned_cols=109  Identities=26%  Similarity=0.383  Sum_probs=85.4

Q ss_pred             HHHHHHhhcCCcceEEEeeeeecCC----cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         14 HILKELTELHHENVVELLHCKESDQ----HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        14 ~~~~~l~~l~h~~iv~l~~~~~~~~----~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      .|+..+..++||||+++++++.+.+    .+|+||||+++|+|.+++.. ..+++.....+..+++.++.++|...... 
T Consensus        46 ~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~~~~-  123 (303)
T 3hmm_A           46 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGT-  123 (303)
T ss_dssp             HHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCST-
T ss_pred             HHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhhhhc-
Confidence            4556667899999999999887543    58999999999999988754 45777788888899999999987531100 


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                              ..-++++||||||+|||++.+          +.+||+|||+|+..
T Consensus       124 ------------------------~~~~~IiHRDlKp~NILl~~~----------~~~Ki~DFGla~~~  158 (303)
T 3hmm_A          124 ------------------------QGKPAIAHRDLKSKNILVKKN----------GTCCIADLGLAVRH  158 (303)
T ss_dssp             ------------------------TCBCCEECSCCCGGGEEECTT----------SCEEECCCTTCEEE
T ss_pred             ------------------------cCCCCEeeccCCcccEEECCC----------CCEEEEeCCCCccc
Confidence                                    001268999999999999854          48999999999754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.77  E-value=5.2e-19  Score=135.27  Aligned_cols=111  Identities=39%  Similarity=0.682  Sum_probs=98.7

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      +......+.+|+++++.++||||+++++++......|+|+||++++++.+++...+.+++.....+..+++.++.++|..
T Consensus        54 ~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~  133 (328)
T 3fe3_A           54 NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK  133 (328)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34556678899999999999999999999999999999999999999998887778899999999999999999998853


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|||+||+||+++.+          +.++|+|||+++..
T Consensus       134 ---------------------------------~ivHrDlkp~NIll~~~----------~~~kl~DFG~a~~~  164 (328)
T 3fe3_A          134 ---------------------------------RIVHRDLKAENLLLDAD----------MNIKIADFGFSNEF  164 (328)
T ss_dssp             ---------------------------------TCCCSCCCGGGEEECTT----------SCEEECSTTCCGGG
T ss_pred             ---------------------------------CEeccCCCHHHEEEcCC----------CCEEEeeccCceec
Confidence                                             68999999999999754          37999999998754

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.75  E-value=2.2e-18  Score=129.48  Aligned_cols=111  Identities=40%  Similarity=0.635  Sum_probs=98.3

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      +......+.+|+++++.++||||+++++++..++..|+++||+++++|..++...+.+++.....+..+++.++.++|..
T Consensus        51 ~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~  130 (294)
T 4eqm_A           51 KEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM  130 (294)
T ss_dssp             CHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34556778899999999999999999999999999999999999999998887777889999999999999999998753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|||+||+||+++.+          ..++|+|||+++.+
T Consensus       131 ---------------------------------~i~H~Dlkp~Nil~~~~----------~~~kl~Dfg~~~~~  161 (294)
T 4eqm_A          131 ---------------------------------RIVHRDIKPQNILIDSN----------KTLKIFDFGIAKAL  161 (294)
T ss_dssp             ---------------------------------TCCCCCCCGGGEEECTT----------SCEEECCCSSSTTC
T ss_pred             ---------------------------------CcccCCCCHHHEEECCC----------CCEEEEeCCCcccc
Confidence                                             68999999999999754          37999999998754

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.75  E-value=2.5e-18  Score=133.06  Aligned_cols=113  Identities=28%  Similarity=0.466  Sum_probs=98.6

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+.+|+++++.++||||+++++++.+....|+++|+++++++.+++...+.+++.....++.+++.++.++|.. 
T Consensus        69 ~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~-  147 (362)
T 2bdw_A           69 ARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN-  147 (362)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            4456678899999999999999999999999999999999999999988877777789999999999999999998853 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++||||||+||+++.++       ....+||+|||+++..
T Consensus       148 --------------------------------~ivH~Dlkp~NIll~~~~-------~~~~~kl~DfG~a~~~  181 (362)
T 2bdw_A          148 --------------------------------GIVHRNLKPENLLLASKA-------KGAAVKLADFGLAIEV  181 (362)
T ss_dssp             --------------------------------TCBCCCCSGGGEEESCSS-------TTCCEEECCCTTCBCC
T ss_pred             --------------------------------CeEeccCchHHEEEecCC-------CCCCEEEeecCcceEe
Confidence                                            689999999999998542       2346899999998754

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.75  E-value=2.6e-18  Score=136.43  Aligned_cols=113  Identities=28%  Similarity=0.455  Sum_probs=98.9

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+.+|+++++.++||||+++++++.+.+..|+++|++++|++.+.+...+.+++.....++.+++.++.++|.. 
T Consensus        51 ~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~-  129 (444)
T 3soa_A           51 ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM-  129 (444)
T ss_dssp             HHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3445667899999999999999999999999999999999999999988887778899999999999999999998863 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++||||||+||+++.+.       ....+||+|||+++..
T Consensus       130 --------------------------------givHrDlKp~NIll~~~~-------~~~~vkL~DFG~a~~~  163 (444)
T 3soa_A          130 --------------------------------GVVHRNLKPENLLLASKL-------KGAAVKLADFGLAIEV  163 (444)
T ss_dssp             --------------------------------TCBCCCCSSTTEEESBSS-------TTCCEEECCCSSCBCC
T ss_pred             --------------------------------CccccCCCHHHEEEeccC-------CCCcEEEccCceeEEe
Confidence                                            689999999999998532       3457899999999754

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.74  E-value=2.4e-18  Score=132.12  Aligned_cols=107  Identities=27%  Similarity=0.439  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .+.....|.++++.++||||+++++++.+....|++|||+++|++..++...+.+++.....+..+++.++.++|..   
T Consensus        48 ~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---  124 (337)
T 1o6l_A           48 EVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---  124 (337)
T ss_dssp             CHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            45567889999999999999999999999999999999999999988877677889999999999999999998853   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++||||||+||+++.+          +.++|+|||+++.
T Consensus       125 ------------------------------~ivHrDlkp~NIll~~~----------g~vkL~DFG~a~~  154 (337)
T 1o6l_A          125 ------------------------------DVVYRDIKLENLMLDKD----------GHIKITDFGLCKE  154 (337)
T ss_dssp             ------------------------------TCBCCCCCGGGEEECTT----------SCEEECCCTTCBC
T ss_pred             ------------------------------CeecCcCCHHHEEECCC----------CCEEEeeccchhh
Confidence                                          68999999999999854          3799999999874

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.74  E-value=2.3e-18  Score=132.75  Aligned_cols=108  Identities=29%  Similarity=0.494  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .+..+.+|.++++.++||||+++++++.+....|++|||++++++..++...+.+++.....+..+++.++.++|..   
T Consensus        84 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---  160 (350)
T 1rdq_E           84 QIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---  160 (350)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            45667889999999999999999999999999999999999999998887777899999999999999999998853   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++||||||+||+++.+          +.++|+|||+++..
T Consensus       161 ------------------------------~ivHrDlkp~NIll~~~----------g~~kL~DFg~a~~~  191 (350)
T 1rdq_E          161 ------------------------------DLIYRDLKPENLLIDQQ----------GYIQVTDFGFAKRV  191 (350)
T ss_dssp             ------------------------------TEECCCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             ------------------------------CcccccCccceEEECCC----------CCEEEcccccceec
Confidence                                          68999999999999754          37999999998754

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.74  E-value=2.1e-18  Score=131.42  Aligned_cols=108  Identities=27%  Similarity=0.526  Sum_probs=95.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .......|..+++.++||||+++++++.+...+|++|||+++|++..++...+.+++.....+..+++.++.++|..   
T Consensus        49 ~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---  125 (318)
T 1fot_A           49 QVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---  125 (318)
T ss_dssp             CHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            45567789999999999999999999999999999999999999998887777889999999999999999988753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.+          +.++|+|||+++..
T Consensus       126 ------------------------------~ivHrDlkp~NIll~~~----------g~~kL~Dfg~a~~~  156 (318)
T 1fot_A          126 ------------------------------DIIYRDLKPENILLDKN----------GHIKITDFGFAKYV  156 (318)
T ss_dssp             ------------------------------TEECCCCCGGGEEECTT----------SCEEECCCSSCEEC
T ss_pred             ------------------------------CccccCCChheEEEcCC----------CCEEEeecCcceec
Confidence                                          68999999999999754          37999999998754

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.74  E-value=5e-18  Score=128.05  Aligned_cols=111  Identities=24%  Similarity=0.406  Sum_probs=97.4

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      +......+.+|+++++.++||||+++++++.+....++++||++++++..++.. .+.+++.....+..+++.++.++|.
T Consensus        47 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~  126 (310)
T 3s95_A           47 DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS  126 (310)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            456677888999999999999999999999999999999999999999888765 4567888999999999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       127 ~---------------------------------~ivH~dlkp~Nil~~~~----------~~~kl~Dfg~~~~~  158 (310)
T 3s95_A          127 M---------------------------------NIIHRDLNSHNCLVREN----------KNVVVADFGLARLM  158 (310)
T ss_dssp             T---------------------------------TEECSCCSTTSEEECTT----------SCEEECCCTTCEEC
T ss_pred             C---------------------------------CccCCCCCcCeEEECCC----------CCEEEeecccceec
Confidence            3                                 68999999999999854          37999999998754

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.74  E-value=2.1e-18  Score=134.71  Aligned_cols=108  Identities=31%  Similarity=0.527  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .+..+.+|+++++.++||||+++++++.+....|+++||+.||+|..++...+.+++..+..++.+++.++.++|..   
T Consensus        58 ~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---  134 (384)
T 4fr4_A           58 EVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---  134 (384)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            35567789999999999999999999999999999999999999988877777889999999999999999998853   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++||||||+||+++.+          +.++|+|||+++.+
T Consensus       135 ------------------------------givHrDlkp~NIll~~~----------g~vkL~DFG~a~~~  165 (384)
T 4fr4_A          135 ------------------------------RIIHRDMKPDNILLDEH----------GHVHITDFNIAAML  165 (384)
T ss_dssp             ------------------------------TEECCCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             ------------------------------CceeccCcHHHeEECCC----------CCEEEeccceeeec
Confidence                                          68999999999999754          37999999999754

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.74  E-value=3.4e-18  Score=132.04  Aligned_cols=108  Identities=31%  Similarity=0.494  Sum_probs=95.2

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ........|.++++.+ +||||+++++++.+...+|+||||++||+|..++...+.+++.....++.+++.++.++|.. 
T Consensus        65 ~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-  143 (353)
T 3txo_A           65 DDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK-  143 (353)
T ss_dssp             TTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             hHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3455677888888887 79999999999999999999999999999998887777899999999999999999998853 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++||||||+||+++.+          +.++|+|||+++.
T Consensus       144 --------------------------------givHrDlkp~NILl~~~----------g~ikL~DFG~a~~  173 (353)
T 3txo_A          144 --------------------------------GIIYRDLKLDNVLLDHE----------GHCKLADFGMCKE  173 (353)
T ss_dssp             --------------------------------TCBCCCCCGGGEEECTT----------SCEEECCCTTCBC
T ss_pred             --------------------------------CCcccCCCHHHEEECCC----------CCEEEccccceee
Confidence                                            68999999999999854          3799999999874

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.73  E-value=3.2e-18  Score=135.69  Aligned_cols=105  Identities=31%  Similarity=0.498  Sum_probs=93.3

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      .++.|..+++.++||||+++++++.+...+|+||||++||+|..++.. .+.+++.....++.+++.++.++|..     
T Consensus       120 ~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~-----  194 (437)
T 4aw2_A          120 CFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL-----  194 (437)
T ss_dssp             CHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC-----
Confidence            367889999999999999999999999999999999999999988765 46789999999999999999998753     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++||||||+||+++.+          +.+||+|||+++.+
T Consensus       195 ----------------------------giiHrDLKp~NILl~~~----------g~vkL~DFGla~~~  225 (437)
T 4aw2_A          195 ----------------------------HYVHRDIKPDNILMDMN----------GHIRLADFGSCLKL  225 (437)
T ss_dssp             ----------------------------TEECCCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             ----------------------------CeEecccCHHHeeEcCC----------CCEEEcchhhhhhc
Confidence                                        68999999999999854          37999999999654

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.73  E-value=6.5e-18  Score=130.83  Aligned_cols=111  Identities=32%  Similarity=0.515  Sum_probs=97.0

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+.+|+.+++.++||||+++++++.+....|+++||+++++|.+++...+.+++.....++.+++.++.++|..    
T Consensus        59 ~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~----  134 (361)
T 2yab_A           59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK----  134 (361)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            4567889999999999999999999999999999999999999999887777899999999999999999998853    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|||+||+||+++.+++      ....++|+|||+++.+
T Consensus       135 -----------------------------givHrDlkp~NIll~~~~~------~~~~vkl~DFG~a~~~  169 (361)
T 2yab_A          135 -----------------------------KIAHFDLKPENIMLLDKNI------PIPHIKLIDFGLAHEI  169 (361)
T ss_dssp             -----------------------------TEECCCCSGGGEEESCTTS------SSCCEEECCCSSCEEC
T ss_pred             -----------------------------CcccCCCCHHHEEEeCCCC------CccCEEEEecCCceEc
Confidence                                         6899999999999975431      1236899999998754

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.73  E-value=4.6e-18  Score=130.82  Aligned_cols=109  Identities=27%  Similarity=0.474  Sum_probs=96.2

Q ss_pred             hhHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ...+...+.|.++++.+ +||||+++++++.+....|++|||+++|+|..++...+.+++.....+..+++.++.++|..
T Consensus        50 ~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~  129 (345)
T 3a8x_A           50 DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER  129 (345)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34566778899999887 89999999999999999999999999999988877777899999999999999999998853


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                       +++||||||+||+++.+          +.++|+|||+++.
T Consensus       130 ---------------------------------~ivHrDlkp~NIll~~~----------g~~kL~DFG~a~~  159 (345)
T 3a8x_A          130 ---------------------------------GIIYRDLKLDNVLLDSE----------GHIKLTDYGMCKE  159 (345)
T ss_dssp             ---------------------------------TCBCCCCCGGGEEECTT----------SCEEECCGGGCBC
T ss_pred             ---------------------------------CceecCCCHHHEEECCC----------CCEEEEecccccc
Confidence                                             68999999999999754          3799999999874

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.73  E-value=6.4e-18  Score=131.06  Aligned_cols=111  Identities=23%  Similarity=0.484  Sum_probs=94.7

Q ss_pred             chhHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----------------CCCHHHH
Q psy11428          5 SKSSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------------TLSEDTI   67 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~   67 (160)
                      +......+.+|+++++.+ +||||+++++++...+..|+++||+++|+|.+++...+                .++....
T Consensus       126 ~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  205 (370)
T 2psq_A          126 TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL  205 (370)
T ss_dssp             BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHH
Confidence            345567788999999999 89999999999999999999999999999988765432                3677788


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceE
Q psy11428         68 RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKL  147 (160)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~  147 (160)
                      ..+..+++.++.++|..                                 +++||||||+||+++.+          +.+
T Consensus       206 ~~i~~qi~~aL~~LH~~---------------------------------~ivHrDlkp~NIll~~~----------~~~  242 (370)
T 2psq_A          206 VSCTYQLARGMEYLASQ---------------------------------KCIHRDLAARNVLVTEN----------NVM  242 (370)
T ss_dssp             HHHHHHHHHHHHHHHHT---------------------------------TEECSCCCGGGEEECTT----------CCE
T ss_pred             HHHHHHHHHHHHHHHhC---------------------------------CeeccccchhhEEECCC----------CCE
Confidence            88899999999998753                                 68999999999999754          379


Q ss_pred             EEeeeeccccc
Q psy11428        148 KIADFGFARFL  158 (160)
Q Consensus       148 ~l~dfg~a~~~  158 (160)
                      ||+|||+++.+
T Consensus       243 kl~DFG~a~~~  253 (370)
T 2psq_A          243 KIADFGLARDI  253 (370)
T ss_dssp             EECCCSSCEET
T ss_pred             EEccccCCccc
Confidence            99999999754

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.72  E-value=6.5e-18  Score=128.70  Aligned_cols=111  Identities=21%  Similarity=0.359  Sum_probs=96.4

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      +......+.+|+++++.++||||+++++++..+...|+++||+++++|..++... +.+++.....++.+++.++.++|.
T Consensus        90 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~  169 (325)
T 3kul_A           90 TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSD  169 (325)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            3455667889999999999999999999999999999999999999998887543 468888999999999999999875


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++||||||+||+++.+          ..++|+|||+++.+
T Consensus       170 ~---------------------------------~ivH~Dlkp~NIll~~~----------~~~kl~Dfg~a~~~  201 (325)
T 3kul_A          170 L---------------------------------GYVHRDLAARNVLVDSN----------LVCKVSDFGLSRVL  201 (325)
T ss_dssp             T---------------------------------TEECSCCSGGGEEECTT----------CCEEECCCSSCEEC
T ss_pred             C---------------------------------CeeCCCCCcceEEECCC----------CCEEECCCCccccc
Confidence            3                                 68999999999999744          37999999999754

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.72  E-value=9.6e-18  Score=127.72  Aligned_cols=111  Identities=28%  Similarity=0.449  Sum_probs=95.8

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+++|+++++.++||||+++++++.+....++++||++++++.+++... ..+++.....++.+++.++.++|.. 
T Consensus        43 ~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~-  121 (321)
T 1tki_A           43 TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH-  121 (321)
T ss_dssp             HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            34556789999999999999999999999999999999999999998877654 3688999999999999999998853 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|||+||+||+++.+        .+..++++|||+++.+
T Consensus       122 --------------------------------givH~Dlkp~NIl~~~~--------~~~~~kl~Dfg~a~~~  154 (321)
T 1tki_A          122 --------------------------------NIGHFDIRPENIIYQTR--------RSSTIKIIEFGQARQL  154 (321)
T ss_dssp             --------------------------------TEECCCCCGGGEEESSS--------SCCCEEECCCTTCEEC
T ss_pred             --------------------------------CCCcCCCCHHHEEEccC--------CCCCEEEEECCCCeEC
Confidence                                            68999999999999742        1347899999999764

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.72  E-value=6.8e-18  Score=135.14  Aligned_cols=108  Identities=31%  Similarity=0.639  Sum_probs=96.6

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+++|+++++.++||||+++++++......|+++||+++++|.+++...+.+++.....+..+++.++.++|..   
T Consensus        59 ~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---  135 (476)
T 2y94_A           59 VVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---  135 (476)
T ss_dssp             THHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            35577899999999999999999999999999999999999999998887777899999999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++||||||+||+++.+          +.+||+|||+++..
T Consensus       136 ------------------------------givHrDLkp~NIll~~~----------~~vkL~DFG~a~~~  166 (476)
T 2y94_A          136 ------------------------------MVVHRDLKPENVLLDAH----------MNAKIADFGLSNMM  166 (476)
T ss_dssp             ------------------------------TEECSCCSGGGEEECTT----------CCEEECCCSSCEEC
T ss_pred             ------------------------------CCCcccccHHHEEEecC----------CCeEEEeccchhhc
Confidence                                          68999999999999854          37899999998754

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.72  E-value=5.1e-18  Score=129.42  Aligned_cols=107  Identities=34%  Similarity=0.556  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+..|+++++.++||||+++++++...+..|+++||++++++..++...+.+++.....++.+++.++.++|..   
T Consensus        64 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---  140 (327)
T 3a62_A           64 DTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---  140 (327)
T ss_dssp             -------HHHHHHHCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            34556789999999999999999999999999999999999999988877677788889999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++||||||+||+++.+          +.++|+|||+++.
T Consensus       141 ------------------------------~ivH~Dlkp~Nill~~~----------~~~kl~Dfg~~~~  170 (327)
T 3a62_A          141 ------------------------------GIIYRDLKPENIMLNHQ----------GHVKLTDFGLCKE  170 (327)
T ss_dssp             ------------------------------TCCCCCCCTTTEEECTT----------SCEEECCCSCC--
T ss_pred             ------------------------------CEEcccCCHHHeEECCC----------CcEEEEeCCcccc
Confidence                                          68999999999999744          3799999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.72  E-value=6.5e-18  Score=132.41  Aligned_cols=106  Identities=27%  Similarity=0.484  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      +...+.|..+++.+ +||||+++++++.+....|+||||+++|+|..++...+.+++.....++.+++.++.++|..   
T Consensus        96 ~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---  172 (396)
T 4dc2_A           96 IDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---  172 (396)
T ss_dssp             CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34466788888776 89999999999999999999999999999988877777899999999999999999998853   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++||||||+||+++.+          +.+||+|||+++.
T Consensus       173 ------------------------------givHrDLKp~NILl~~~----------g~ikL~DFGla~~  202 (396)
T 4dc2_A          173 ------------------------------GIIYRDLKLDNVLLDSE----------GHIKLTDYGMCKE  202 (396)
T ss_dssp             ------------------------------TCBCCCCCGGGEEECTT----------SCEEECCCTTCBC
T ss_pred             ------------------------------CEEeccCCHHHEEECCC----------CCEEEeecceeee
Confidence                                          68999999999999854          3799999999874

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.72  E-value=9.8e-18  Score=127.69  Aligned_cols=107  Identities=31%  Similarity=0.511  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+++|+.+++.++||||+++++++..+...|+++||++++++..++...+.+++.....++.+++.++.++|..    
T Consensus        49 ~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~----  124 (323)
T 3tki_A           49 PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI----  124 (323)
T ss_dssp             --CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            3557789999999999999999999999999999999999999998887777789999999999999999998753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|||+||+||+++.+          ..++|+|||+++.+
T Consensus       125 -----------------------------givH~Dlkp~NIll~~~----------~~~kl~Dfg~a~~~  155 (323)
T 3tki_A          125 -----------------------------GITHRDIKPENLLLDER----------DNLKISDFGLATVF  155 (323)
T ss_dssp             -----------------------------TEECSCCSGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             -----------------------------CccccccchHHEEEeCC----------CCEEEEEeecccee
Confidence                                         68999999999999854          37999999998643

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.72  E-value=7.8e-18  Score=129.68  Aligned_cols=107  Identities=29%  Similarity=0.423  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .......|.++++.+ +||||+++++++.+....|+||||++||+|..++...+.+++.....+..+++.++.++|..  
T Consensus        60 ~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--  137 (345)
T 1xjd_A           60 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK--  137 (345)
T ss_dssp             CHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             hHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            445667788888876 89999999999999999999999999999998887767889999999999999999998853  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++|||+||+||+++.+          +.++|+|||+++.
T Consensus       138 -------------------------------~ivHrDlkp~NIll~~~----------g~vkL~DFG~a~~  167 (345)
T 1xjd_A          138 -------------------------------GIVYRDLKLDNILLDKD----------GHIKIADFGMCKE  167 (345)
T ss_dssp             -------------------------------TCBCCCCCGGGEEECTT----------SCEEECCCTTCBC
T ss_pred             -------------------------------CeEeCCCChhhEEECCC----------CCEEEeEChhhhh
Confidence                                           68999999999999854          3799999999874

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.72  E-value=1.5e-17  Score=126.69  Aligned_cols=111  Identities=34%  Similarity=0.521  Sum_probs=96.9

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+.+|+++++.++||||+++++++......++++|++++++|.+++...+.+++.....++.+++.++.++|..    
T Consensus        58 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~----  133 (326)
T 2y0a_A           58 REDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL----  133 (326)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC----
Confidence            5667889999999999999999999999999999999999999998887777789999999999999999998753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|||+||+||+++.++.      ....++|+|||+++.+
T Consensus       134 -----------------------------~ivH~Dlkp~NIll~~~~~------~~~~~kl~Dfg~a~~~  168 (326)
T 2y0a_A          134 -----------------------------QIAHFDLKPENIMLLDRNV------PKPRIKIIDFGLAHKI  168 (326)
T ss_dssp             -----------------------------TEECCCCCGGGEEESCSSS------SSCCEEECCCTTCEEC
T ss_pred             -----------------------------CeEcCCCCHHHEEEecCCC------CCCCEEEEECCCCeEC
Confidence                                         6899999999999975421      2236899999998754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.72  E-value=1e-17  Score=126.20  Aligned_cols=111  Identities=29%  Similarity=0.453  Sum_probs=95.3

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec------------------------
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG------------------------   60 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~------------------------   60 (160)
                      +......+.+|+++++.++||||+++++++...+..++++|++++++|.+++...+                        
T Consensus        66 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (314)
T 2ivs_A           66 SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDER  145 (314)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------C
T ss_pred             CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHHhhccCCccccccccccccccccccc
Confidence            34566778899999999999999999999999999999999999999988765432                        


Q ss_pred             CCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCC
Q psy11428         61 TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYP  140 (160)
Q Consensus        61 ~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~  140 (160)
                      .+++..+..++.+++.++.++|..                                 +++|+|+||+||+++.+      
T Consensus       146 ~~~~~~~~~i~~qi~~~l~~lH~~---------------------------------~ivH~dikp~NIli~~~------  186 (314)
T 2ivs_A          146 ALTMGDLISFAWQISQGMQYLAEM---------------------------------KLVHRDLAARNILVAEG------  186 (314)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHHHT---------------------------------TEECCCCSGGGEEEETT------
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHC---------------------------------CCcccccchheEEEcCC------
Confidence            267888889999999999998853                                 68999999999999854      


Q ss_pred             CCCCceEEEeeeeccccc
Q psy11428        141 QPQHIKLKIADFGFARFL  158 (160)
Q Consensus       141 ~~~~~~~~l~dfg~a~~~  158 (160)
                          ..++|+|||+++..
T Consensus       187 ----~~~kl~Dfg~~~~~  200 (314)
T 2ivs_A          187 ----RKMKISDFGLSRDV  200 (314)
T ss_dssp             ----TEEEECCCTTCEEC
T ss_pred             ----CCEEEccccccccc
Confidence                37999999998754

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.72  E-value=4.2e-18  Score=134.12  Aligned_cols=107  Identities=32%  Similarity=0.493  Sum_probs=93.8

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      +..++.|..++..++||||+++++++.+...+|+||||++||+|..++...+ .+++.....++.+++.++.++|..   
T Consensus       105 ~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---  181 (412)
T 2vd5_A          105 VSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---  181 (412)
T ss_dssp             GCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            3446788999999999999999999999999999999999999998876543 688999999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++||||||+||+++.+          +.+||+|||+++.+
T Consensus       182 ------------------------------giiHrDLKp~NILld~~----------g~vkL~DFGla~~~  212 (412)
T 2vd5_A          182 ------------------------------GYVHRDIKPDNILLDRC----------GHIRLADFGSCLKL  212 (412)
T ss_dssp             ------------------------------TEECCCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             ------------------------------CeeecccCHHHeeecCC----------CCEEEeechhheec
Confidence                                          68999999999999854          37999999998754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.71  E-value=9.7e-18  Score=130.23  Aligned_cols=111  Identities=23%  Similarity=0.371  Sum_probs=91.7

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      +......+.+|+++++.++||||+++++++......++++||+++++|.+++...+ .+++.....+..+++.++.++|.
T Consensus        86 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~  165 (373)
T 2qol_A           86 TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSD  165 (373)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            34556678899999999999999999999999999999999999999998876543 57888888999999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++||||||+||+++.+          ..+||+|||+++.+
T Consensus       166 ~---------------------------------~ivH~Dlkp~NIll~~~----------~~~kl~Dfg~a~~~  197 (373)
T 2qol_A          166 M---------------------------------GYVHRDLAARNILINSN----------LVCKVSDFGLGRVL  197 (373)
T ss_dssp             T---------------------------------TCCCSCCCGGGEEECTT----------CCEEECCC------
T ss_pred             C---------------------------------CeeCCCCCcceEEEcCC----------CCEEECcCcccccc
Confidence            3                                 68999999999999754          37899999998754

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.71  E-value=9.5e-18  Score=127.06  Aligned_cols=110  Identities=23%  Similarity=0.402  Sum_probs=92.0

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecC---CCHHHHHHHHHHHHHHHHHh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT---LSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~   81 (160)
                      +......+.+|+++++.++||||+++++++......++++||++++++..++...+.   +++.....+..+++.++.++
T Consensus        74 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L  153 (309)
T 3p86_A           74 HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL  153 (309)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence            345566788999999999999999999999999999999999999999888765433   78888888999999999988


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCccc--ceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR--IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~--iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      |..                                 +  ++||||||+||+++.+          ..++|+|||+++.
T Consensus       154 H~~---------------------------------~~~ivH~Dikp~NIll~~~----------~~~kL~Dfg~a~~  188 (309)
T 3p86_A          154 HNR---------------------------------NPPIVHRNLKSPNLLVDKK----------YTVKVCDFGLSRL  188 (309)
T ss_dssp             HTS---------------------------------SSCCCCTTCCGGGEEECTT----------CCEEECCCC----
T ss_pred             HcC---------------------------------CCCEECCCCChhhEEEeCC----------CcEEECCCCCCcc
Confidence            753                                 4  8999999999999744          3799999999864

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.71  E-value=1.5e-17  Score=129.40  Aligned_cols=108  Identities=20%  Similarity=0.287  Sum_probs=95.2

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ......+++|+++++.++||||+++++++...+..|+|+||++++++.+++...  +.+++..+..++.+++.++.++|.
T Consensus        67 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~  146 (389)
T 3gni_B           67 NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHH  146 (389)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            455677889999999999999999999999999999999999999998877654  568889999999999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      .                                 +++||||||+||+++.+          +.++++|||.+.
T Consensus       147 ~---------------------------------~ivHrDlkp~NIll~~~----------~~~kl~dfg~~~  176 (389)
T 3gni_B          147 M---------------------------------GYVHRSVKASHILISVD----------GKVYLSGLRSNL  176 (389)
T ss_dssp             T---------------------------------TEECCCCSGGGEEECTT----------CCEEECCGGGCE
T ss_pred             C---------------------------------CeecCCCCHHHEEEcCC----------CCEEEcccccce
Confidence            3                                 68999999999999754          378999999875

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.71  E-value=1.3e-17  Score=125.42  Aligned_cols=107  Identities=28%  Similarity=0.481  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+.+++.++||||+++++++..++..|+++||+++++|.+++.. ..+++.....++.+++.++.++|..   
T Consensus        60 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---  135 (297)
T 3fxz_A           60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSN---  135 (297)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            345678899999999999999999999999999999999999999887643 4588888999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       136 ------------------------------~i~H~Dlkp~Nil~~~~----------~~~kl~Dfg~~~~~  166 (297)
T 3fxz_A          136 ------------------------------QVIHRDIKSDNILLGMD----------GSVKLTDFGFCAQI  166 (297)
T ss_dssp             ------------------------------TEECCCCSGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             ------------------------------CceeCCCCHHHEEECCC----------CCEEEeeCCCceec
Confidence                                          68999999999999854          37999999998654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.71  E-value=2.5e-17  Score=123.60  Aligned_cols=107  Identities=31%  Similarity=0.602  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeec--CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~--~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .+..+.+|+++++.++||||+++++++.+  ....|+++|+++++++.... ..+.+++.....++.+++.++.++|.. 
T Consensus        79 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~-  156 (298)
T 2zv2_A           79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP-TLKPLSEDQARFYFQDLIKGIEYLHYQ-  156 (298)
T ss_dssp             --CHHHHHHHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS-CSSCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             hHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            35668899999999999999999999876  56899999999999998754 345688999999999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       157 --------------------------------~ivH~Dlkp~Nil~~~~----------~~~kl~Dfg~~~~~  187 (298)
T 2zv2_A          157 --------------------------------KIIHRDIKPSNLLVGED----------GHIKIADFGVSNEF  187 (298)
T ss_dssp             --------------------------------TEECCCCCGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             --------------------------------CeeccCCCHHHEEECCC----------CCEEEecCCCcccc
Confidence                                            68999999999999754          37899999998754

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.71  E-value=1.1e-17  Score=128.72  Aligned_cols=110  Identities=32%  Similarity=0.465  Sum_probs=93.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ...+++|+++++.++||||+++++++...+..|++|||+++++|...+...    ..+++.....++.+++.++.++|..
T Consensus        70 ~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~  149 (351)
T 3c0i_A           70 TEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN  149 (351)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            566789999999999999999999999999999999999999997665433    2478888889999999999998853


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++||||||+||+++.++       ....++|+|||+++.+
T Consensus       150 ---------------------------------~ivHrDlkp~NIl~~~~~-------~~~~vkl~Dfg~a~~~  183 (351)
T 3c0i_A          150 ---------------------------------NIIHRDVKPHCVLLASKE-------NSAPVKLGGFGVAIQL  183 (351)
T ss_dssp             ---------------------------------TEECSCCSGGGEEECSSS-------TTCCEEECCCTTCEEC
T ss_pred             ---------------------------------CceeccCChHHeEEecCC-------CCCcEEEecCcceeEe
Confidence                                             689999999999998543       2345899999998754

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.71  E-value=7.7e-18  Score=132.54  Aligned_cols=104  Identities=32%  Similarity=0.486  Sum_probs=91.5

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      .++.|.++++.++||||+++++++.+...+|+||||++||+|..++. ...+++.....+..+++.++.++|..      
T Consensus       115 ~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~gg~L~~~l~-~~~~~e~~~~~~~~qi~~aL~~LH~~------  187 (410)
T 3v8s_A          115 FFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMS-NYDVPEKWARFYTAEVVLALDAIHSM------  187 (410)
T ss_dssp             THHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHT------
T ss_pred             HHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHC------
Confidence            36688999999999999999999999999999999999999988764 35688889999999999999998853      


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                 +++||||||+||+++.+          +.+||+|||+++.+
T Consensus       188 ---------------------------givHrDLKp~NILl~~~----------g~ikL~DFG~a~~~  218 (410)
T 3v8s_A          188 ---------------------------GFIHRDVKPDNMLLDKS----------GHLKLADFGTCMKM  218 (410)
T ss_dssp             ---------------------------TEECCCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             ---------------------------CeEeccCCHHHeeECCC----------CCEEEeccceeEee
Confidence                                       68999999999999854          37999999999654

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.71  E-value=1.5e-17  Score=126.74  Aligned_cols=112  Identities=33%  Similarity=0.552  Sum_probs=96.0

Q ss_pred             hHHHHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ........|+++++.+. ||||+++++++.+....|+++|+++++++.+++...+.+++.....++.+++.++.++|.. 
T Consensus        47 ~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~-  125 (325)
T 3kn6_A           47 RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV-  125 (325)
T ss_dssp             GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            34566778999999997 9999999999999999999999999999998887777899999999999999999998853 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|||+||+||+++.++       ....++|+|||+++..
T Consensus       126 --------------------------------~ivH~Dlkp~NIll~~~~-------~~~~~kl~Dfg~a~~~  159 (325)
T 3kn6_A          126 --------------------------------GVVHRDLKPENLLFTDEN-------DNLEIKIIDFGFARLK  159 (325)
T ss_dssp             --------------------------------TEECCCCCGGGEEEEC-----------CEEEECCCTTCEEC
T ss_pred             --------------------------------CCeecCCCHHHEEEecCC-------CcccEEEeccccceec
Confidence                                            689999999999998532       3347899999999754

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.71  E-value=5.7e-18  Score=131.53  Aligned_cols=109  Identities=28%  Similarity=0.455  Sum_probs=94.3

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+.+|+++++.++||||+++++++......|+++|++++|++..++...+ .++......++.+++.++.++|.. 
T Consensus       154 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-  232 (377)
T 3cbl_A          154 DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK-  232 (377)
T ss_dssp             HHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            344567789999999999999999999999999999999999999988876543 578888889999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|||+||+||+++.+          ..+||+|||+++..
T Consensus       233 --------------------------------~ivHrDlkp~Nil~~~~----------~~~kl~DfG~s~~~  263 (377)
T 3cbl_A          233 --------------------------------CCIHRDLAARNCLVTEK----------NVLKISDFGMSREE  263 (377)
T ss_dssp             --------------------------------TEECSCCSGGGEEECTT----------CCEEECCGGGCEEC
T ss_pred             --------------------------------CcCCcccCHHHEEEcCC----------CcEEECcCCCceec
Confidence                                            68999999999999744          37999999998743

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.71  E-value=1.1e-17  Score=128.47  Aligned_cols=105  Identities=35%  Similarity=0.667  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ..+.+|+++++.++||||+++++++.+....|+++||+ +|++.+++...+.+++.....+..+++.++.++|..     
T Consensus        54 ~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~-----  127 (336)
T 3h4j_B           54 MRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH-----  127 (336)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH-----
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            46778999999999999999999999999999999999 678887777777899999999999999999998864     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++|||+||+||+++.+          ..++|+|||+++..
T Consensus       128 ----------------------------givH~Dlkp~NIll~~~----------~~~kl~DFG~s~~~  158 (336)
T 3h4j_B          128 ----------------------------KIVHRDLKPENLLLDDN----------LNVKIADFGLSNIM  158 (336)
T ss_dssp             ----------------------------TCCCCCCSTTTEEECTT----------CCEEECCSSCTBTT
T ss_pred             ----------------------------CeEecCCchhhEEEcCC----------CCEEEEEeccceec
Confidence                                        68999999999999844          37999999998754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.70  E-value=1.8e-17  Score=128.87  Aligned_cols=111  Identities=26%  Similarity=0.507  Sum_probs=95.9

Q ss_pred             chhHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----------------CCCHHHH
Q psy11428          5 SKSSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------------TLSEDTI   67 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~   67 (160)
                      +......+.+|+++++.+ +||||+++++++...+..|+++|++++++|.+++....                .+++..+
T Consensus       114 ~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~  193 (382)
T 3tt0_A          114 TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL  193 (382)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHH
T ss_pred             CHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHH
Confidence            345567788999999999 99999999999999999999999999999988775432                4788899


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceE
Q psy11428         68 RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKL  147 (160)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~  147 (160)
                      ..++.+++.++.++|..                                 +++||||||+||+++.+          ..+
T Consensus       194 ~~i~~qi~~aL~~LH~~---------------------------------~ivH~Dlkp~NIll~~~----------~~~  230 (382)
T 3tt0_A          194 VSCAYQVARGMEYLASK---------------------------------KCIHRDLAARNVLVTED----------NVM  230 (382)
T ss_dssp             HHHHHHHHHHHHHHHHT---------------------------------TCCCSCCCGGGEEECTT----------CCE
T ss_pred             HHHHHHHHHHHHHHHhC---------------------------------CEecCCCCcceEEEcCC----------CcE
Confidence            99999999999998853                                 68999999999999754          379


Q ss_pred             EEeeeeccccc
Q psy11428        148 KIADFGFARFL  158 (160)
Q Consensus       148 ~l~dfg~a~~~  158 (160)
                      ||+|||+++.+
T Consensus       231 kL~DFG~a~~~  241 (382)
T 3tt0_A          231 KIADFGLARDI  241 (382)
T ss_dssp             EECSCSCCCCS
T ss_pred             EEcccCccccc
Confidence            99999998754

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.70  E-value=1.4e-17  Score=128.66  Aligned_cols=108  Identities=30%  Similarity=0.425  Sum_probs=95.0

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ........|.+++..+ +||+|+++++++.+....|++|||++||+|..++...+.+++.....+..+++.++.++|.. 
T Consensus        62 ~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-  140 (353)
T 2i0e_A           62 DDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK-  140 (353)
T ss_dssp             TCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             hHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3455677888888887 89999999999999999999999999999998887777899999999999999999998853 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++||||||+||+++.+          +.++|+|||+++.
T Consensus       141 --------------------------------givHrDlkp~NIll~~~----------g~vkL~DFG~a~~  170 (353)
T 2i0e_A          141 --------------------------------GIIYRDLKLDNVMLDSE----------GHIKIADFGMCKE  170 (353)
T ss_dssp             --------------------------------TCBCCCCCGGGEEECTT----------SCEEECCCTTCBC
T ss_pred             --------------------------------CEEeccCCHHHEEEcCC----------CcEEEEeCCcccc
Confidence                                            68999999999999754          3799999999874

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.70  E-value=1.4e-17  Score=133.49  Aligned_cols=110  Identities=31%  Similarity=0.507  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+.+|+++++.++||||+++++++.+....|+|+||+++|++..++...+.+++.....++.+++.++.++|..    
T Consensus        80 ~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----  155 (494)
T 3lij_A           80 NSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH----  155 (494)
T ss_dssp             THHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            4567889999999999999999999999999999999999999988777777889999999999999999998853    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++||||||+||+++..+       ....+||+|||+++..
T Consensus       156 -----------------------------~ivH~Dlkp~Nil~~~~~-------~~~~~kl~DfG~a~~~  189 (494)
T 3lij_A          156 -----------------------------NIVHRDLKPENLLLESKE-------KDALIKIVDFGLSAVF  189 (494)
T ss_dssp             -----------------------------TEECSCCSGGGEEESCSS-------TTCCEEECCCTTCEEC
T ss_pred             -----------------------------CceeccCChhhEEEeCCC-------CCCcEEEEECCCCeEC
Confidence                                         689999999999997532       3346899999998754

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.70  E-value=1.6e-17  Score=132.82  Aligned_cols=111  Identities=31%  Similarity=0.522  Sum_probs=97.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++||||+++++++.+....|+++|+++++++...+...+.+++.....++.+++.++.++|..   
T Consensus        64 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---  140 (486)
T 3mwu_A           64 DTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---  140 (486)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34567889999999999999999999999999999999999999988777777889999999999999999998853   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++||||||+||+++.++       ....++|+|||+++.+
T Consensus       141 ------------------------------~ivH~Dlkp~Nil~~~~~-------~~~~~kl~Dfg~a~~~  174 (486)
T 3mwu_A          141 ------------------------------NIVHRDLKPENILLESKE-------KDCDIKIIDFGLSTCF  174 (486)
T ss_dssp             ------------------------------TCCCSCCSGGGEEESSSS-------TTCCEEECSCSCTTTB
T ss_pred             ------------------------------CeEeccCchHHEEEecCC-------CCCCEEEEECCcCeEC
Confidence                                          689999999999997432       3457999999998754

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.70  E-value=3.2e-17  Score=128.06  Aligned_cols=110  Identities=29%  Similarity=0.525  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+++|+++++.++||||+++++++.+....++++||+++++|.+++...+ .+++..+..++.+++.++.++|..  
T Consensus        91 ~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--  168 (387)
T 1kob_A           91 DKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH--  168 (387)
T ss_dssp             HHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             hHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            34567889999999999999999999999999999999999999988775543 578999999999999999998853  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++||||||+||+++.+        ....++|+|||+++.+
T Consensus       169 -------------------------------givHrDlkp~NIll~~~--------~~~~vkL~DFG~a~~~  201 (387)
T 1kob_A          169 -------------------------------SIVHLDIKPENIMCETK--------KASSVKIIDFGLATKL  201 (387)
T ss_dssp             -------------------------------TEECCCCCGGGEEESST--------TCCCEEECCCTTCEEC
T ss_pred             -------------------------------CeeecccchHHeEEecC--------CCCceEEEecccceec
Confidence                                           68999999999999742        2346899999999754

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.70  E-value=1.9e-17  Score=128.06  Aligned_cols=107  Identities=31%  Similarity=0.532  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ...++|+.+++.++||||+++++++......|+++||++++++..++...+.+++.....++.+++.++.++|..     
T Consensus        61 ~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~-----  135 (361)
T 3uc3_A           61 ENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM-----  135 (361)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            456789999999999999999999999999999999999999988877777899999999999999999998853     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                  +++|||+||+||+++.++        ...+||+|||+++.
T Consensus       136 ----------------------------~ivH~Dlkp~Nill~~~~--------~~~~kl~Dfg~a~~  167 (361)
T 3uc3_A          136 ----------------------------QICHRDLKLENTLLDGSP--------APRLKICDFGYSKS  167 (361)
T ss_dssp             ----------------------------TCCSCCCCGGGEEECSSS--------SCCEEECCCCCC--
T ss_pred             ----------------------------CcccCCCCHHHEEEcCCC--------CceEEEeecCcccc
Confidence                                        689999999999997432        23589999999863

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.70  E-value=2.9e-17  Score=122.44  Aligned_cols=117  Identities=19%  Similarity=0.188  Sum_probs=95.5

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecC-CCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+.+|+++++.++||||+++++++...+..++++||+++++|.+++...+. +++.....+..+++.++.++|.. 
T Consensus        54 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-  132 (289)
T 4fvq_A           54 NYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN-  132 (289)
T ss_dssp             GGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC-
Confidence            4456788999999999999999999999999999999999999999988765443 78888888999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|||+||+||+++.++...  ......++++|||+++..
T Consensus       133 --------------------------------~ivH~Dlkp~NIll~~~~~~~--~~~~~~~kl~Dfg~~~~~  171 (289)
T 4fvq_A          133 --------------------------------TLIHGNVCAKNILLIREEDRK--TGNPPFIKLSDPGISITV  171 (289)
T ss_dssp             --------------------------------TCCCCCCCGGGEEEEECCBGG--GTBCCEEEECCCCSCTTT
T ss_pred             --------------------------------CeECCCcCcceEEEecCCccc--ccccceeeeccCcccccc
Confidence                                            689999999999998653100  001123899999998654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.70  E-value=2.7e-17  Score=132.18  Aligned_cols=111  Identities=32%  Similarity=0.544  Sum_probs=97.2

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++||||+++++++.+....|+|+||+++|++..++...+.+++.....++.+++.++.++|..   
T Consensus        89 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---  165 (504)
T 3q5i_A           89 FHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---  165 (504)
T ss_dssp             THHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34567889999999999999999999999999999999999999988877777889999999999999999998853   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.++       ....++|+|||+++..
T Consensus       166 ------------------------------~ivH~Dlkp~Nil~~~~~-------~~~~~kl~Dfg~a~~~  199 (504)
T 3q5i_A          166 ------------------------------NIVHRDIKPENILLENKN-------SLLNIKIVDFGLSSFF  199 (504)
T ss_dssp             ------------------------------TEECSCCSGGGEEESSTT-------CCSSEEECCCTTCEEC
T ss_pred             ------------------------------CeEeCCCcHHHEEEecCC-------CCccEEEEECCCCEEc
Confidence                                          689999999999998543       2236899999999754

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.70  E-value=2.2e-17  Score=134.70  Aligned_cols=108  Identities=30%  Similarity=0.441  Sum_probs=94.0

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....+.+|.++|+.++||||+++++++.+....|+||||++||+|..++...+  .+++.....++.+++.++.++|.. 
T Consensus       227 ~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~-  305 (576)
T 2acx_A          227 GEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE-  305 (576)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            34557789999999999999999999999999999999999999987765543  388999999999999999998853 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++||||||+||+++.+          +.+||+|||+++.+
T Consensus       306 --------------------------------gIvHrDLKPeNILld~~----------g~vKL~DFGla~~~  336 (576)
T 2acx_A          306 --------------------------------RIVYRDLKPENILLDDH----------GHIRISDLGLAVHV  336 (576)
T ss_dssp             --------------------------------TEECCCCCGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             --------------------------------CEeccCCchheEEEeCC----------CCeEEEecccceec
Confidence                                            68999999999999854          37999999999754

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.69  E-value=1.6e-17  Score=126.60  Aligned_cols=109  Identities=27%  Similarity=0.397  Sum_probs=94.2

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee------------------------cC
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK------------------------GT   61 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~------------------------~~   61 (160)
                      ......+++|+++++.++||||+++++++......|+++||+++++|.+++...                        ..
T Consensus        91 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (343)
T 1luf_A           91 ADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP  170 (343)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CC
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCC
Confidence            345667889999999999999999999999999999999999999998776432                        45


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCC
Q psy11428         62 LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ  141 (160)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~  141 (160)
                      +++.....+..+++.++.++|..                                 +++|+|+||+||+++.+       
T Consensus       171 l~~~~~~~i~~qi~~~l~~LH~~---------------------------------~ivH~Dlkp~NIl~~~~-------  210 (343)
T 1luf_A          171 LSCAEQLCIARQVAAGMAYLSER---------------------------------KFVHRDLATRNCLVGEN-------  210 (343)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHT---------------------------------TCCCSCCSGGGEEECGG-------
T ss_pred             CCHHHHHHHHHHHHHHHHHHHhC---------------------------------CeecCCCCcceEEECCC-------
Confidence            77888888999999999998853                                 68999999999999754       


Q ss_pred             CCCceEEEeeeecccc
Q psy11428        142 PQHIKLKIADFGFARF  157 (160)
Q Consensus       142 ~~~~~~~l~dfg~a~~  157 (160)
                         +.++|+|||+++.
T Consensus       211 ---~~~kl~Dfg~~~~  223 (343)
T 1luf_A          211 ---MVVKIADFGLSRN  223 (343)
T ss_dssp             ---GCEEECCCSCHHH
T ss_pred             ---CeEEEeecCCCcc
Confidence               3799999999864

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.69  E-value=6.3e-18  Score=133.90  Aligned_cols=108  Identities=30%  Similarity=0.433  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+..|+++++.++||||+++++++...+.+|+||||+++++|..++...+.+++.....+..+++.++.++|..   
T Consensus       191 ~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---  267 (446)
T 4ejn_A          191 EVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE---  267 (446)
T ss_dssp             ----------CCCCCSCTTSCCEEEEEEETTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc---
Confidence            34556778889999999999999999999999999999999999988877677789999999999999999998751   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   .+++||||||+||+++.+          +.++|+|||+++.
T Consensus       268 -----------------------------~giiHrDlkp~NIll~~~----------~~~kl~DFG~a~~  298 (446)
T 4ejn_A          268 -----------------------------KNVVYRDLKLENLMLDKD----------GHIKITDFGLCKE  298 (446)
T ss_dssp             -----------------------------TCCCCCCCCGGGEEECSS----------SCEEECCCCCCCT
T ss_pred             -----------------------------CCEEECCCCHHHEEECCC----------CCEEEccCCCcee
Confidence                                         158999999999999854          3799999999874

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.69  E-value=5.2e-17  Score=123.10  Aligned_cols=109  Identities=23%  Similarity=0.358  Sum_probs=94.3

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----CCCHHHHHHHHHHHHHHHHHh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----TLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      ......+.+|+++++.++||||+++++.+...+..++++||++++++.+++....    .+++.....+..+++.++.++
T Consensus        76 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  155 (321)
T 2qkw_B           76 SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYL  155 (321)
T ss_dssp             SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHh
Confidence            4456778899999999999999999999999999999999999999988775432    467888888999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      |..                                 +++|+|+||+||+++.+          ..++|+|||+++.
T Consensus       156 H~~---------------------------------~ivH~dlkp~Nil~~~~----------~~~kl~Dfg~~~~  188 (321)
T 2qkw_B          156 HTR---------------------------------AIIHRDVKSINILLDEN----------FVPKITDFGISKK  188 (321)
T ss_dssp             HHT---------------------------------TEECSCCCSTTEEECTT----------CCEEECCCTTCEE
T ss_pred             cCC---------------------------------CeecCCCCHHHEEECCC----------CCEEEeecccccc
Confidence            753                                 68999999999999744          3799999999864

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.69  E-value=3.9e-18  Score=130.21  Aligned_cols=118  Identities=24%  Similarity=0.273  Sum_probs=86.3

Q ss_pred             hHHHHHHHHHHHHhhcC---------CcceEEEeee-----------------eec-------------CCcEEEEEEEe
Q psy11428          7 SSIVLTRHILKELTELH---------HENVVELLHC-----------------KES-------------DQHVYLVMEFC   47 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~---------h~~iv~l~~~-----------------~~~-------------~~~~~lv~e~~   47 (160)
                      .....+.+|+++++.++         |||++++.++                 +.+             ....|+||||+
T Consensus        65 ~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~  144 (336)
T 2vuw_A           65 KTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFE  144 (336)
T ss_dssp             BCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEE
T ss_pred             hhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEec
Confidence            34466778888888775         6666666554                 332             78899999999


Q ss_pred             CCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh-hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCC
Q psy11428         48 NGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ-VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKP  126 (160)
Q Consensus        48 ~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~  126 (160)
                      ++|++...+.. +.+++..+..++.+++.++.++| ..                                 +++||||||
T Consensus       145 ~~g~ll~~~~~-~~~~~~~~~~i~~qi~~aL~~lH~~~---------------------------------~ivHrDlKp  190 (336)
T 2vuw_A          145 FGGIDLEQMRT-KLSSLATAKSILHQLTASLAVAEASL---------------------------------RFEHRDLHW  190 (336)
T ss_dssp             CCCEETGGGTT-TCCCHHHHHHHHHHHHHHHHHHHHHH---------------------------------CCBCSCCCG
T ss_pred             CCCccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHhC---------------------------------CEeECCCCH
Confidence            99976655533 56789999999999999999988 53                                 689999999


Q ss_pred             CCeeeecCCCCC----------CCCCCCceEEEeeeeccccc
Q psy11428        127 QNILLSHSFGKQ----------YPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus       127 ~nvl~~~~~~~~----------~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +||+++.++...          ........+||+|||+|+..
T Consensus       191 ~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~  232 (336)
T 2vuw_A          191 GNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLE  232 (336)
T ss_dssp             GGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEE
T ss_pred             HHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEec
Confidence            999998642000          00001237999999999864

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.69  E-value=2.1e-17  Score=131.99  Aligned_cols=112  Identities=29%  Similarity=0.503  Sum_probs=98.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|+++++.++||||+++++++...+..|+++|++.++++..++...+.+++.....++.+++.++.++|..  
T Consensus        68 ~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--  145 (484)
T 3nyv_A           68 TDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN--  145 (484)
T ss_dssp             SCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            445678899999999999999999999999999999999999999988877777899999999999999999998863  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++||||||+||+++...       ....++|+|||+++.+
T Consensus       146 -------------------------------~ivH~Dlkp~Nil~~~~~-------~~~~~kl~Dfg~a~~~  179 (484)
T 3nyv_A          146 -------------------------------KIVHRDLKPENLLLESKS-------KDANIRIIDFGLSTHF  179 (484)
T ss_dssp             -------------------------------TCCCSCCCGGGEEESSSS-------TTCCEEECCTTHHHHB
T ss_pred             -------------------------------CeeeCCCCHHHEEEecCC-------CCCcEEEEeeeeeEEc
Confidence                                           689999999999996421       3457999999998754

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.69  E-value=2.8e-17  Score=122.95  Aligned_cols=110  Identities=33%  Similarity=0.535  Sum_probs=91.6

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+.+|+++++.++||||+++++++.++...++++|+++++.+.......+.+++.....+..+++.++.++|.. 
T Consensus        42 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~-  120 (292)
T 3o0g_A           42 EGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR-  120 (292)
T ss_dssp             TTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             CCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            3445677889999999999999999999999999999999998644333322346788999999999999999998863 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|||+||+||+++.+          +.++|+|||+++..
T Consensus       121 --------------------------------~ivH~dikp~Nil~~~~----------~~~kl~Dfg~~~~~  151 (292)
T 3o0g_A          121 --------------------------------NVLHRDLKPQNLLINRN----------GELKLANFGLARAF  151 (292)
T ss_dssp             --------------------------------TEECCCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             --------------------------------CeecCCCCHHHEEEcCC----------CCEEEeecccceec
Confidence                                            68999999999999854          37999999998754

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.69  E-value=3.9e-17  Score=121.15  Aligned_cols=112  Identities=29%  Similarity=0.541  Sum_probs=96.6

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|+++++.++||||+++++++.+....|+++|+++++++..++...+.+++.....+..+++.++.++|..  
T Consensus        48 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--  125 (277)
T 3f3z_A           48 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL--  125 (277)
T ss_dssp             SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            345678899999999999999999999999999999999999999988777677789999999999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|+||+||++..+       +.+..++++|||+++.+
T Consensus       126 -------------------------------~i~H~dlkp~Nil~~~~-------~~~~~~~l~Dfg~~~~~  159 (277)
T 3f3z_A          126 -------------------------------NVAHRDLKPENFLFLTD-------SPDSPLKLIDFGLAARF  159 (277)
T ss_dssp             -------------------------------TEECCCCSGGGEEESSS-------STTCCEEECCCTTCEEC
T ss_pred             -------------------------------CccCCCCCHHHEEEecC-------CCCCcEEEEecccceec
Confidence                                           68999999999999432       13457999999998653

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.69  E-value=3.5e-17  Score=121.02  Aligned_cols=106  Identities=25%  Similarity=0.443  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|++++++++||||+++++++.++...|+++|+++++++.+++... +.+++.....+..+++.++.++|..    
T Consensus        50 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~----  125 (269)
T 4hcu_A           50 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA----  125 (269)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC----
Confidence            45788999999999999999999999999999999999999998877543 4578888888999999999998753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       126 -----------------------------~i~H~dikp~Nil~~~~----------~~~kl~Dfg~~~~~  156 (269)
T 4hcu_A          126 -----------------------------CVIHRDLAARNCLVGEN----------QVIKVSDFGMTRFV  156 (269)
T ss_dssp             -----------------------------TCCCSCCCGGGEEECGG----------GCEEECCTTGGGGB
T ss_pred             -----------------------------CeecCCcchheEEEcCC----------CCEEeccccccccc
Confidence                                         68999999999999754          37999999998754

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.69  E-value=2.8e-17  Score=124.37  Aligned_cols=110  Identities=24%  Similarity=0.426  Sum_probs=89.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCC-----------------------------------------------
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQ-----------------------------------------------   38 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~-----------------------------------------------   38 (160)
                      ......+.+|+++++.++||||+++++++.+..                                               
T Consensus        45 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  124 (332)
T 3qd2_B           45 ELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTV  124 (332)
T ss_dssp             TTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC-------------------------------------
T ss_pred             hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhccccccccccCCCcccccccceeeccccCccccc
Confidence            345667889999999999999999999876543                                               


Q ss_pred             ----------cEEEEEEEeCCCceeEEEeeecC---CCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeE
Q psy11428         39 ----------HVYLVMEFCNGGDLADYLVSKGT---LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY  105 (160)
Q Consensus        39 ----------~~~lv~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~  105 (160)
                                ..+++||+++++++.+++.....   .++..+..++.+++.++.++|..                     
T Consensus       125 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---------------------  183 (332)
T 3qd2_B          125 GQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSK---------------------  183 (332)
T ss_dssp             -------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---------------------
T ss_pred             ccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhC---------------------
Confidence                      28999999999999887765433   23445777889999999998753                     


Q ss_pred             EEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428        106 LVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus       106 ~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                  +++|||+||+||+++.+          ..++|+|||+++.+
T Consensus       184 ------------~ivH~Dlkp~NIll~~~----------~~~kL~DfG~a~~~  214 (332)
T 3qd2_B          184 ------------GLMHRDLKPSNIFFTMD----------DVVKVGDFGLVTAM  214 (332)
T ss_dssp             ------------TEECCCCCGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             ------------CeeecCCCcccEEEeCC----------CCEEEeecCccccc
Confidence                        68999999999999854          37999999998754

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.69  E-value=2.1e-17  Score=123.77  Aligned_cols=111  Identities=28%  Similarity=0.474  Sum_probs=92.7

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      +......+.+|+++++.++||||+++++++...  ...++++||+++++|.+++...+ .+++.....+..+++.++.++
T Consensus        51 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l  130 (295)
T 3ugc_A           51 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL  130 (295)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHH
Confidence            345566788999999999999999999988543  55899999999999998876543 488888899999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                 +++|+|+||+||+++.++          .++|+|||+++..
T Consensus       131 H~~---------------------------------~ivH~Dikp~Nil~~~~~----------~~kl~Dfg~~~~~  164 (295)
T 3ugc_A          131 GTK---------------------------------RYIHRDLATRNILVENEN----------RVKIGDFGLTKVL  164 (295)
T ss_dssp             HHT---------------------------------TCCCSCCSGGGEEEEETT----------EEEECCCCSCC--
T ss_pred             hcC---------------------------------CcccCCCCHhhEEEcCCC----------eEEEccCcccccc
Confidence            753                                 689999999999998543          7999999999754

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.69  E-value=2.3e-17  Score=132.47  Aligned_cols=108  Identities=28%  Similarity=0.458  Sum_probs=94.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....+.+|+++++.++||||+++++++......|+++||+++|+|.+++...  ..++......++.+++.++.++|.. 
T Consensus       259 ~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~-  337 (495)
T 1opk_A          259 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-  337 (495)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            4567889999999999999999999999999999999999999999887643  3477888888999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++||||||+||+++.+          ..+||+|||+++.+
T Consensus       338 --------------------------------~ivHrDlkp~NIll~~~----------~~~kl~DFG~a~~~  368 (495)
T 1opk_A          338 --------------------------------NFIHRNLAARNCLVGEN----------HLVKVADFGLSRLM  368 (495)
T ss_dssp             --------------------------------TEECSCCSGGGEEECGG----------GCEEECCTTCEECC
T ss_pred             --------------------------------CcccCCCChhhEEECCC----------CcEEEeecccceec
Confidence                                            68999999999999754          47999999999764

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.69  E-value=3.7e-17  Score=120.71  Aligned_cols=107  Identities=22%  Similarity=0.444  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|+++++.++||||+++++++......++++|+++++++.+++...+ .+++.....++.+++.++.++|..   
T Consensus        47 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---  123 (268)
T 3sxs_A           47 EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---  123 (268)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            3457789999999999999999999999999999999999999988776543 488889999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       124 ------------------------------~i~H~dikp~Nil~~~~----------~~~~l~Dfg~~~~~  154 (268)
T 3sxs_A          124 ------------------------------QFIHRDLAARNCLVDRD----------LCVKVSDFGMTRYV  154 (268)
T ss_dssp             ------------------------------TEEESSCSGGGEEECTT----------CCEEECCTTCEEEC
T ss_pred             ------------------------------CeecCCcCcceEEECCC----------CCEEEccCccceec
Confidence                                          68999999999999754          37999999998754

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.69  E-value=5.3e-17  Score=120.71  Aligned_cols=114  Identities=29%  Similarity=0.468  Sum_probs=97.8

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      +......+.+|+++++.++||||+++++++......++++|+++++++...+...+.+++.....+..+++.++.++|..
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  124 (284)
T 3kk8_A           45 SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN  124 (284)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            34456677899999999999999999999999999999999999999987776677789999999999999999998753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|+||+||+++.++       ....++|+|||++...
T Consensus       125 ---------------------------------~i~H~dikp~Nil~~~~~-------~~~~~kl~Dfg~~~~~  158 (284)
T 3kk8_A          125 ---------------------------------GIVHRNLKPENLLLASKA-------KGAAVKLADFGLAIEV  158 (284)
T ss_dssp             ---------------------------------TEECSCCCGGGEEESSSS-------TTCCEEECCCTTCEEC
T ss_pred             ---------------------------------CcCcCCCCHHHEEEecCC-------CCCcEEEeeceeeEEc
Confidence                                             689999999999998543       3346899999998643

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.69  E-value=7.3e-18  Score=127.41  Aligned_cols=110  Identities=29%  Similarity=0.477  Sum_probs=92.5

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCc----EEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQH----VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~----~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      ......+++|+++++.++||||+++++++.....    .|++|||+++++|.+++...+.+++.....+..+++.++.++
T Consensus        53 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l  132 (311)
T 3ork_A           53 PSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFS  132 (311)
T ss_dssp             HHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence            3456678899999999999999999998876544    499999999999998877777889999999999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                 +++|+|+||+||+++.+          ..++|+|||+++.+
T Consensus       133 H~~---------------------------------~ivH~dlkp~Nil~~~~----------~~~kl~Dfg~a~~~  166 (311)
T 3ork_A          133 HQN---------------------------------GIIHRDVKPANIMISAT----------NAVKVMDFGIARAI  166 (311)
T ss_dssp             HHT---------------------------------TCCCCCCCGGGEEEETT----------SCEEECCCSCC---
T ss_pred             HHC---------------------------------CCCcCCCCHHHEEEcCC----------CCEEEeeccCcccc
Confidence            753                                 68999999999999854          37899999998654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.69  E-value=2.2e-17  Score=127.82  Aligned_cols=113  Identities=22%  Similarity=0.325  Sum_probs=94.9

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-------cCCCHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-------GTLSEDTIRIFLKQIVQA   77 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-------~~~~~~~~~~~~~~~~~~   77 (160)
                      +......+..|+.+++.++||||+++++++......|+|+||+++|+|..++...       ..++...+..++.+++.+
T Consensus       114 ~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a  193 (367)
T 3l9p_A          114 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG  193 (367)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHH
T ss_pred             ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHH
Confidence            3445556778999999999999999999999999999999999999998877543       246788888899999999


Q ss_pred             HHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         78 LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        78 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +.++|..                                 +++||||||+||+++.++       ....++|+|||+++.
T Consensus       194 L~~LH~~---------------------------------~ivHrDlkp~NIll~~~~-------~~~~~kL~DFG~a~~  233 (367)
T 3l9p_A          194 CQYLEEN---------------------------------HFIHRDIAARNCLLTCPG-------PGRVAKIGDFGMARD  233 (367)
T ss_dssp             HHHHHHT---------------------------------TCCCSCCCGGGEEESCSS-------TTCCEEECCCHHHHH
T ss_pred             HHHHHhC---------------------------------CeeCCCCChhhEEEecCC-------CCceEEECCCccccc
Confidence            9998863                                 689999999999998543       234689999999864

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.69  E-value=3.2e-17  Score=122.05  Aligned_cols=109  Identities=27%  Similarity=0.514  Sum_probs=87.0

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .+....+.+|+.+++.++||||+++++++. .+..|+++|+++++++..++...+ .+++.....+..+++.++.++|..
T Consensus        57 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~  135 (281)
T 1mp8_A           57 DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK  135 (281)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            445667889999999999999999999874 567899999999999988775443 578888888999999999998753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|||+||+||+++.++          .++|+|||+++..
T Consensus       136 ---------------------------------~i~H~dlkp~Nil~~~~~----------~~kl~Dfg~~~~~  166 (281)
T 1mp8_A          136 ---------------------------------RFVHRDIAARNVLVSSND----------CVKLGDFGLSRYM  166 (281)
T ss_dssp             ---------------------------------TCCCSCCSGGGEEEEETT----------EEEECC-------
T ss_pred             ---------------------------------CeecccccHHHEEECCCC----------CEEECcccccccc
Confidence                                             689999999999998543          7999999998754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.69  E-value=3.5e-17  Score=125.79  Aligned_cols=108  Identities=31%  Similarity=0.540  Sum_probs=92.2

Q ss_pred             HHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         12 TRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        12 ~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      ...|++++.++ +||||+++++++.++...|++|||+++|++.+++...+.+++.....+..+++.++.++|..      
T Consensus        62 ~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~------  135 (342)
T 2qr7_A           62 PTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ------  135 (342)
T ss_dssp             CHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT------
T ss_pred             hHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC------
Confidence            34678888777 79999999999999999999999999999988887777889999999999999999998853      


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                 +++|||+||+||++....+      ....++|+|||+++.+
T Consensus       136 ---------------------------givHrDlkp~NIl~~~~~~------~~~~~kl~Dfg~a~~~  170 (342)
T 2qr7_A          136 ---------------------------GVVHRDLKPSNILYVDESG------NPESIRICDFGFAKQL  170 (342)
T ss_dssp             ---------------------------TEECSCCCGGGEEESSSSC------SGGGEEECCCTTCEEC
T ss_pred             ---------------------------CcEeccCCHHHEEEecCCC------CcCeEEEEECCCcccC
Confidence                                       6899999999999864321      2246899999998754

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.69  E-value=3e-17  Score=130.28  Aligned_cols=108  Identities=28%  Similarity=0.440  Sum_probs=91.6

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeee-----cCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKE-----SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~-----~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      .....+.+|+++|+.++||||+++++++.     ....+|+++|++ ++++..++...+.+++..+..++.+++.++.++
T Consensus        94 ~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~L  172 (458)
T 3rp9_A           94 IDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIA-DSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV  172 (458)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEECCC-SEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEEecc-ccchhhhcccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            44567788999999999999999999884     335799999987 567777766667789999999999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                 +++||||||+||+++.+          +.+||+|||+++..
T Consensus       173 H~~---------------------------------~iiHrDlKp~NILl~~~----------~~~kl~DFGla~~~  206 (458)
T 3rp9_A          173 HSA---------------------------------GILHRDLKPANCLVNQD----------CSVKVCDFGLARTV  206 (458)
T ss_dssp             HHT---------------------------------TCBCCCCCGGGEEECTT----------CCEEECCCTTCBCT
T ss_pred             HhC---------------------------------CcCCCCCChhhEEECCC----------CCEeecccccchhc
Confidence            863                                 68999999999999854          37999999999764

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.69  E-value=6.7e-17  Score=125.54  Aligned_cols=111  Identities=32%  Similarity=0.552  Sum_probs=94.3

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+++|+++++.++||||+++++++...+..++|+||+++++|.+++... ..+++.....++.+++.++.++|.. 
T Consensus       128 ~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-  206 (373)
T 2x4f_A          128 KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM-  206 (373)
T ss_dssp             HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            34567789999999999999999999999999999999999999998766543 4578888888999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++||||||+||+++.+        ....++|+|||+++.+
T Consensus       207 --------------------------------~ivH~Dlkp~NIll~~~--------~~~~~kl~DFG~a~~~  239 (373)
T 2x4f_A          207 --------------------------------YILHLDLKPENILCVNR--------DAKQIKIIDFGLARRY  239 (373)
T ss_dssp             --------------------------------TEECCCCCGGGEEEEET--------TTTEEEECCCSSCEEC
T ss_pred             --------------------------------CcccccCCHHHEEEecC--------CCCcEEEEeCCCceec
Confidence                                            68999999999999532        2347999999999754

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.69  E-value=4.6e-17  Score=128.17  Aligned_cols=108  Identities=31%  Similarity=0.579  Sum_probs=92.8

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ..+.+|+++++.++||||+++++.+.. ...|+++||++++++.+++...+.+++.....++.+++.++.++|..     
T Consensus       185 ~~~~~E~~~l~~l~hpniv~l~~~~~~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~-----  258 (419)
T 3i6u_A          185 LNVETEIEILKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN-----  258 (419)
T ss_dssp             CCHHHHHHHHHHCCCTTBCCCCEEEES-SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEec-CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            356789999999999999999998754 55899999999999988877777889999999999999999998853     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++|||+||+||+++.++       ....+||+|||+++.+
T Consensus       259 ----------------------------~ivHrDlkp~NIll~~~~-------~~~~~kl~DFG~a~~~  292 (419)
T 3i6u_A          259 ----------------------------GIIHRDLKPENVLLSSQE-------EDCLIKITDFGHSKIL  292 (419)
T ss_dssp             ----------------------------TCCCSCCCGGGEEESSSS-------SSCCEEECCSSTTTSC
T ss_pred             ----------------------------CccccCCChHhEEEecCC-------CcceEEEeecccceec
Confidence                                        689999999999997542       3346999999999754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.68  E-value=4.2e-17  Score=121.31  Aligned_cols=106  Identities=24%  Similarity=0.456  Sum_probs=93.5

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+++++.++||||+++++++......|+++|+++++++.+++.. ...+++.....++.+++.++.++|..    
T Consensus        64 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----  139 (283)
T 3gen_A           64 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK----  139 (283)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            4577899999999999999999999999999999999999999888765 45688899999999999999998753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       140 -----------------------------~i~H~dikp~Nili~~~----------~~~kl~Dfg~~~~~  170 (283)
T 3gen_A          140 -----------------------------QFLHRDLAARNCLVNDQ----------GVVKVSDFGLSRYV  170 (283)
T ss_dssp             -----------------------------TCCCSSCSGGGEEECTT----------SCEEECSTTGGGGB
T ss_pred             -----------------------------CccCCCCccceEEEcCC----------CCEEEccccccccc
Confidence                                         68999999999999744          37999999998754

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.68  E-value=3.3e-17  Score=125.09  Aligned_cols=109  Identities=38%  Similarity=0.587  Sum_probs=92.0

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-----------------------CC
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-----------------------TL   62 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-----------------------~~   62 (160)
                      .....+.+|+++++.+ +||||+++++++...+..|+++|++++|+|.+++....                       .+
T Consensus        90 ~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  169 (344)
T 1rjb_A           90 SEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL  169 (344)
T ss_dssp             --CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------C
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccC
Confidence            3456788999999999 89999999999999999999999999999988765432                       26


Q ss_pred             CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCC
Q psy11428         63 SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQP  142 (160)
Q Consensus        63 ~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~  142 (160)
                      ++..+..++.+++.++.++|..                                 +++|+||||+||+++.+        
T Consensus       170 ~~~~~~~i~~qi~~aL~~LH~~---------------------------------~ivH~Dikp~NIll~~~--------  208 (344)
T 1rjb_A          170 TFEDLLCFAYQVAKGMEFLEFK---------------------------------SCVHRDLAARNVLVTHG--------  208 (344)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHT---------------------------------TEEETTCSGGGEEEETT--------
T ss_pred             CHHHHHHHHHHHHHHHHHHHhC---------------------------------CcccCCCChhhEEEcCC--------
Confidence            7788888999999999998753                                 68999999999999854        


Q ss_pred             CCceEEEeeeeccccc
Q psy11428        143 QHIKLKIADFGFARFL  158 (160)
Q Consensus       143 ~~~~~~l~dfg~a~~~  158 (160)
                        ..++|+|||+++.+
T Consensus       209 --~~~kL~Dfg~~~~~  222 (344)
T 1rjb_A          209 --KVVKICDFGLARDI  222 (344)
T ss_dssp             --TEEEECCCGGGSCG
T ss_pred             --CcEEeCCCccCccc
Confidence              38999999998644

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.68  E-value=2.5e-17  Score=126.75  Aligned_cols=109  Identities=37%  Similarity=0.575  Sum_probs=87.6

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ..+++|+++++.++||||+++++++......++++||++++++.+++...+.+++.....++.+++.++.++|..     
T Consensus        93 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~-----  167 (349)
T 2w4o_A           93 KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN-----  167 (349)
T ss_dssp             ------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            456789999999999999999999999999999999999999988887777789999999999999999998753     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++|||+||+||+++..       +.+..++|+|||+++..
T Consensus       168 ----------------------------~ivH~Dikp~NIll~~~-------~~~~~~kl~Dfg~a~~~  201 (349)
T 2w4o_A          168 ----------------------------GIVHRDLKPENLLYATP-------APDAPLKIADFGLSKIV  201 (349)
T ss_dssp             ----------------------------TCCCCCCCGGGEEESSS-------STTCCEEECCCC-----
T ss_pred             ----------------------------CeEecCCCcccEEEecC-------CCCCCEEEccCcccccc
Confidence                                        68999999999999742       13457999999998754

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.68  E-value=4.8e-17  Score=132.08  Aligned_cols=108  Identities=30%  Similarity=0.410  Sum_probs=93.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ....+..|.++++.++||||+++++++.+...+|++|||++||+|..++...    ..+++.....++.+++.++.++|.
T Consensus       228 ~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~  307 (543)
T 3c4z_A          228 GYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ  307 (543)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH
Confidence            3456788999999999999999999999999999999999999998776543    357888999999999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|||+||+||+++.+          +.+||+|||+++.+
T Consensus       308 ~---------------------------------gIvHrDLKP~NILl~~~----------g~vkL~DFGla~~~  339 (543)
T 3c4z_A          308 R---------------------------------NIIYRDLKPENVLLDDD----------GNVRISDLGLAVEL  339 (543)
T ss_dssp             T---------------------------------TEECCCCCGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             c---------------------------------CCcccCCChHHEEEeCC----------CCEEEeecceeeec
Confidence            3                                 68999999999999854          37999999999754

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.68  E-value=1.9e-17  Score=128.77  Aligned_cols=104  Identities=29%  Similarity=0.443  Sum_probs=86.5

Q ss_pred             HHHHHHHH-HhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         11 LTRHILKE-LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        11 ~~~~~~~~-l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ....|..+ ++.++||||+++++++.+...+|+||||++||+|..++...+.+++.....+..+++.++.++|..     
T Consensus        84 ~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~-----  158 (373)
T 2r5t_A           84 HIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL-----  158 (373)
T ss_dssp             -------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            34445555 467899999999999999999999999999999988877777889999999999999999998853     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                  +++||||||+||+++.+          +.++|+|||+++.
T Consensus       159 ----------------------------givHrDlkp~NIll~~~----------g~ikL~DFG~a~~  188 (373)
T 2r5t_A          159 ----------------------------NIVYRDLKPENILLDSQ----------GHIVLTDFGLCKE  188 (373)
T ss_dssp             ----------------------------TCCCCCCCGGGEEECTT----------SCEEECCCCBCGG
T ss_pred             ----------------------------CceecCCCHHHEEECCC----------CCEEEeeCccccc
Confidence                                        68999999999999854          3799999999874

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.68  E-value=1.6e-16  Score=121.44  Aligned_cols=108  Identities=21%  Similarity=0.421  Sum_probs=95.0

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEE------Eee--ecCCCHHHHHHHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADY------LVS--KGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~------l~~--~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ....+.+|+++++.++||||+++++++...+..|+++|++++++|..+      +..  .+.+++.....++.+++.++.
T Consensus        86 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~  165 (348)
T 2pml_X           86 KYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFS  165 (348)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHH
Confidence            347788999999999999999999999999999999999999999998      554  466888999999999999999


Q ss_pred             Hhhh-hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQV-KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~-~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|. .                                 +++|+|++|+||+++.+          ..++|+|||+++..
T Consensus       166 ~lH~~~---------------------------------~i~H~dl~p~Nil~~~~----------~~~kl~dfg~~~~~  202 (348)
T 2pml_X          166 YIHNEK---------------------------------NICHRDVKPSNILMDKN----------GRVKLSDFGESEYM  202 (348)
T ss_dssp             HHHHTS---------------------------------CEECCCCCGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             HHhccC---------------------------------CEeecCCChHhEEEcCC----------CcEEEecccccccc
Confidence            9875 2                                 68999999999999754          37899999998754

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.68  E-value=9.4e-17  Score=120.13  Aligned_cols=110  Identities=28%  Similarity=0.467  Sum_probs=96.3

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+..|+.+++.++||||+++++.+...+..++++|+++++++..++...+.+++.....+..+++.++.++|.. 
T Consensus        56 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-  134 (294)
T 2rku_A           56 PHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-  134 (294)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3456677889999999999999999999999999999999999999988776667788999999999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+||+++.+          +.++|+|||+++..
T Consensus       135 --------------------------------~i~H~dl~p~Nil~~~~----------~~~kl~dfg~~~~~  165 (294)
T 2rku_A          135 --------------------------------RVIHRDLKLGNLFLNED----------LEVKIGDFGLATKV  165 (294)
T ss_dssp             --------------------------------TEECCCCCGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             --------------------------------CccccCCChHhEEEcCC----------CCEEEEeccCceec
Confidence                                            68999999999999854          37899999998654

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.68  E-value=4.1e-17  Score=125.14  Aligned_cols=110  Identities=35%  Similarity=0.520  Sum_probs=91.1

Q ss_pred             hhHHHHHHHHHHHHhhc-CCcceEEEeeeeecCC-cEEEEEEEeCCCceeEEEeeecC----------------------
Q psy11428          6 KSSIVLTRHILKELTEL-HHENVVELLHCKESDQ-HVYLVMEFCNGGDLADYLVSKGT----------------------   61 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~-~~~lv~e~~~~g~l~~~l~~~~~----------------------   61 (160)
                      ......+.+|+++++.+ +||||+++++++...+ ..++++||+++|+|..++.....                      
T Consensus        66 ~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  145 (359)
T 3vhe_A           66 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAI  145 (359)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------
T ss_pred             HHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhccccccccc
Confidence            34556788999999999 7899999999887654 48999999999998776643321                      


Q ss_pred             --------------------------------------------CCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeee
Q psy11428         62 --------------------------------------------LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHC   97 (160)
Q Consensus        62 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~   97 (160)
                                                                  +++.....++.+++.++.++|..             
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~-------------  212 (359)
T 3vhe_A          146 PVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR-------------  212 (359)
T ss_dssp             --------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT-------------
T ss_pred             chhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC-------------
Confidence                                                        67788888999999999998863             


Q ss_pred             eecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         98 KESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        98 ~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                          +++||||||+||+++.+          ..++|+|||+++.+
T Consensus       213 --------------------~ivH~Dikp~NIll~~~----------~~~kl~Dfg~a~~~  243 (359)
T 3vhe_A          213 --------------------KCIHRDLAARNILLSEK----------NVVKICDFGLARDI  243 (359)
T ss_dssp             --------------------TCCCSCCSGGGEEECGG----------GCEEECCCGGGSCT
T ss_pred             --------------------CcccCCCChhhEEEcCC----------CcEEEEeccceeee
Confidence                                68999999999999854          37999999999754

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.68  E-value=5.3e-17  Score=121.24  Aligned_cols=111  Identities=35%  Similarity=0.647  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ....+..|+++++.++||||+++++++.+....|+++|+++++++..++...    ..+++.....++.+++.++.++|.
T Consensus        63 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~  142 (285)
T 3is5_A           63 PMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS  142 (285)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4567788999999999999999999999999999999999999998776432    567888999999999999999875


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|+||+||+++.+.       .+..++|+|||+++.+
T Consensus       143 ~---------------------------------~ivH~dikp~NIl~~~~~-------~~~~~kl~Dfg~a~~~  177 (285)
T 3is5_A          143 Q---------------------------------HVVHKDLKPENILFQDTS-------PHSPIKIIDFGLAELF  177 (285)
T ss_dssp             T---------------------------------TCCCCCCSGGGEEESSSS-------TTCCEEECCCCCCCC-
T ss_pred             C---------------------------------CEEECCCCHHHEEEecCC-------CCCCEEEEeeecceec
Confidence            3                                 689999999999996432       3457899999998653

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.68  E-value=7.1e-17  Score=123.30  Aligned_cols=110  Identities=28%  Similarity=0.467  Sum_probs=96.6

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+..|+++++.++||||+++++.+.+.+..|+++|++.++++..++...+.+++.....++.+++.++.++|.. 
T Consensus        82 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-  160 (335)
T 2owb_A           82 PHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN-  160 (335)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3456678889999999999999999999999999999999999999988776667789999999999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+||||+||+++.+          +.++|+|||+++..
T Consensus       161 --------------------------------~ivH~dlkp~NIl~~~~----------~~~kl~Dfg~~~~~  191 (335)
T 2owb_A          161 --------------------------------RVIHRDLKLGNLFLNED----------LEVKIGDFGLATKV  191 (335)
T ss_dssp             --------------------------------TEECSCCCGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             --------------------------------CCEecCCCchhEEEcCC----------CCEEEeeccCceec
Confidence                                            68999999999999854          37899999998754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.68  E-value=4.8e-17  Score=134.27  Aligned_cols=108  Identities=26%  Similarity=0.383  Sum_probs=94.5

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|+++++.++||||+++++++.. ...+++|||+++|+|.+++...+.+++.....++.+++.++.++|..  
T Consensus       412 ~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~--  488 (635)
T 4fl3_A          412 ALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES--  488 (635)
T ss_dssp             GGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            345678899999999999999999998864 56899999999999998887777789999999999999999998853  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++||||||+||+++.++          .+||+|||+++.+
T Consensus       489 -------------------------------~iiHrDLkp~NILl~~~~----------~~kL~DFGla~~~  519 (635)
T 4fl3_A          489 -------------------------------NFVHRDLAARNVLLVTQH----------YAKISDFGLSKAL  519 (635)
T ss_dssp             -------------------------------TCCCSCCSGGGEEEEETT----------EEEECCTTHHHHT
T ss_pred             -------------------------------CEeCCCCChHhEEEeCCC----------CEEEEEcCCcccc
Confidence                                           689999999999998543          7999999999754

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.68  E-value=6.5e-17  Score=121.68  Aligned_cols=109  Identities=33%  Similarity=0.479  Sum_probs=94.2

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec------------------CCCHHHH
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG------------------TLSEDTI   67 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~------------------~~~~~~~   67 (160)
                      .....+.+|+++++.+ +||||+++++++..++..++++|++++++|.+++...+                  .+++...
T Consensus        68 ~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (313)
T 1t46_A           68 TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDL  147 (313)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHH
T ss_pred             HHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHH
Confidence            4456788999999999 99999999999999999999999999999988765432                  3788888


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceE
Q psy11428         68 RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKL  147 (160)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~  147 (160)
                      ..+..+++.++.++|..                                 +++|+|+||+||+++.+          ..+
T Consensus       148 ~~~~~qi~~~l~~lH~~---------------------------------~i~H~dlkp~Nil~~~~----------~~~  184 (313)
T 1t46_A          148 LSFSYQVAKGMAFLASK---------------------------------NCIHRDLAARNILLTHG----------RIT  184 (313)
T ss_dssp             HHHHHHHHHHHHHHHHT---------------------------------TCCCSCCSGGGEEEETT----------TEE
T ss_pred             HHHHHHHHHHHHHHHHC---------------------------------CeecCCCccceEEEcCC----------CCE
Confidence            99999999999998853                                 68999999999999854          379


Q ss_pred             EEeeeeccccc
Q psy11428        148 KIADFGFARFL  158 (160)
Q Consensus       148 ~l~dfg~a~~~  158 (160)
                      +|+|||+++..
T Consensus       185 kl~Dfg~~~~~  195 (313)
T 1t46_A          185 KICDFGLARDI  195 (313)
T ss_dssp             EECCCGGGSCT
T ss_pred             EEccccccccc
Confidence            99999998754

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.68  E-value=8.9e-17  Score=122.66  Aligned_cols=112  Identities=32%  Similarity=0.551  Sum_probs=91.0

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--------------------------
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--------------------------   59 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--------------------------   59 (160)
                      ......+.+|+++++.++||||+++++++.+....|+++||+++++|.+++...                          
T Consensus        69 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  148 (345)
T 3hko_A           69 PKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEE  148 (345)
T ss_dssp             -CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeCCCCCcHHHHHHHhhccccccccccccccccccccccccc
Confidence            445677889999999999999999999999999999999999999998776421                          


Q ss_pred             --------------cCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCC
Q psy11428         60 --------------GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLK  125 (160)
Q Consensus        60 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk  125 (160)
                                    ..+++..+..++.+++.++.++|..                                 +++|+|+|
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---------------------------------~ivH~Dlk  195 (345)
T 3hko_A          149 AINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---------------------------------GICHRDIK  195 (345)
T ss_dssp             HHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHT---------------------------------TEECCCCC
T ss_pred             ccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---------------------------------CccccCCC
Confidence                          1124556777888999999988753                                 68999999


Q ss_pred             CCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428        126 PQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus       126 ~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |+||+++.+        ....++|+|||+++.+
T Consensus       196 p~NIll~~~--------~~~~~kl~Dfg~a~~~  220 (345)
T 3hko_A          196 PENFLFSTN--------KSFEIKLVDFGLSKEF  220 (345)
T ss_dssp             GGGEEESCS--------SSCCEEECCCTTCEEG
T ss_pred             hhhEEEecC--------CCceEEEeeccccccc
Confidence            999999743        2236899999998743

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.68  E-value=5.7e-17  Score=122.71  Aligned_cols=107  Identities=38%  Similarity=0.590  Sum_probs=90.1

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|+++++.++||||+++++++.++...++++||+++ ++...+.. ...+++..+..++.+++.++.++|..  
T Consensus        62 ~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~--  138 (311)
T 3niz_A           62 IPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH--  138 (311)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             hhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            345677899999999999999999999999999999999985 55544433 34578889999999999999998853  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|||+||+||+++.+          ..++|+|||+++..
T Consensus       139 -------------------------------~ivH~Dikp~NIl~~~~----------~~~kl~Dfg~a~~~  169 (311)
T 3niz_A          139 -------------------------------RILHRDLKPQNLLINSD----------GALKLADFGLARAF  169 (311)
T ss_dssp             -------------------------------TEECCCCCGGGEEECTT----------CCEEECCCTTCEET
T ss_pred             -------------------------------CcccCCCchHhEEECCC----------CCEEEccCcCceec
Confidence                                           68999999999999854          37999999998754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.68  E-value=7.3e-17  Score=122.19  Aligned_cols=112  Identities=32%  Similarity=0.529  Sum_probs=92.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCC--cEEEEEEEeCCCceeEEEeeecC---CCHHHHHHHHHHHHHHHHHhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQ--HVYLVMEFCNGGDLADYLVSKGT---LSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~--~~~lv~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ....+.+|+++++.++||||+++++++....  ..|+++||++++++..++.....   +++.....++.+++.++.++|
T Consensus        50 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH  129 (319)
T 4euu_A           50 PVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR  129 (319)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            3566778999999999999999999887655  78999999999999888765433   788999999999999999988


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++||||||+||++...      .+....++|+|||+++.+
T Consensus       130 ~~---------------------------------~ivH~Dlkp~NIll~~~------~~~~~~~kL~Dfg~a~~~  166 (319)
T 4euu_A          130 EN---------------------------------GIVHRNIKPGNIMRVIG------EDGQSVYKLTDFGAAREL  166 (319)
T ss_dssp             HT---------------------------------TEECSCCSGGGEEEEEC------TTSCEEEEECCCTTCEEC
T ss_pred             HC---------------------------------CEecCCCCHHHEEEecc------CCCCceEEEccCCCceec
Confidence            53                                 68999999999998421      124457899999999754

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.67  E-value=4.1e-17  Score=123.60  Aligned_cols=111  Identities=23%  Similarity=0.426  Sum_probs=89.0

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcE------EEEEEEeCCCceeEEEeeec------CCCHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHV------YLVMEFCNGGDLADYLVSKG------TLSEDTIRIFLK   72 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~------~lv~e~~~~g~l~~~l~~~~------~~~~~~~~~~~~   72 (160)
                      +......+.+|+++++.++||||+++++++......      ++++||+.++++..++....      .+++.....++.
T Consensus        65 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~  144 (323)
T 3qup_A           65 ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV  144 (323)
T ss_dssp             -CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHH
Confidence            345567888999999999999999999998877655      99999999999988764332      478888999999


Q ss_pred             HHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeee
Q psy11428         73 QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADF  152 (160)
Q Consensus        73 ~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~df  152 (160)
                      +++.++.++|..                                 +++|||+||+||+++.+          +.++|+||
T Consensus       145 qi~~al~~LH~~---------------------------------~ivH~Dikp~NIli~~~----------~~~kl~Df  181 (323)
T 3qup_A          145 DIACGMEYLSSR---------------------------------NFIHRDLAARNCMLAED----------MTVCVADF  181 (323)
T ss_dssp             HHHHHHHHHHHT---------------------------------TCCCSCCSGGGEEECTT----------SCEEECCC
T ss_pred             HHHHHHHHHHcC---------------------------------CcccCCCCcceEEEcCC----------CCEEEeec
Confidence            999999998863                                 68999999999999744          37999999


Q ss_pred             eccccc
Q psy11428        153 GFARFL  158 (160)
Q Consensus       153 g~a~~~  158 (160)
                      |+++..
T Consensus       182 g~a~~~  187 (323)
T 3qup_A          182 GLSRKI  187 (323)
T ss_dssp             CC----
T ss_pred             cccccc
Confidence            998754

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.67  E-value=7.4e-17  Score=120.90  Aligned_cols=109  Identities=28%  Similarity=0.480  Sum_probs=92.8

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      .....+.+|+++++.++||||+++++++...  ...++++|++++++|.+++.. .+.+++.....+..+++.++.++|.
T Consensus        65 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~  144 (302)
T 4e5w_A           65 NHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGS  144 (302)
T ss_dssp             CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhc
Confidence            3456788999999999999999999988776  678999999999999988743 3457888899999999999999875


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|+||+||+++.++          .++|+|||+++..
T Consensus       145 ~---------------------------------~i~H~dikp~Nil~~~~~----------~~kl~Dfg~~~~~  176 (302)
T 4e5w_A          145 R---------------------------------QYVHRDLAARNVLVESEH----------QVKIGDFGLTKAI  176 (302)
T ss_dssp             T---------------------------------TEECSCCSGGGEEEEETT----------EEEECCCTTCEEC
T ss_pred             C---------------------------------CcccCCCchheEEEcCCC----------CEEECcccccccc
Confidence            3                                 689999999999998543          7999999998754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.67  E-value=6.3e-17  Score=121.84  Aligned_cols=109  Identities=29%  Similarity=0.487  Sum_probs=94.7

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|+++++.++||||+++++++...+..++++|+++++++..++...+.+++.....+..+++.++.++|..  
T Consensus        44 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~--  121 (311)
T 4agu_A           44 VIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH--  121 (311)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            335567789999999999999999999999999999999999998877665566788999999999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       122 -------------------------------~ivH~dlkp~Nil~~~~----------~~~kl~Dfg~~~~~  152 (311)
T 4agu_A          122 -------------------------------NCIHRDVKPENILITKH----------SVIKLCDFGFARLL  152 (311)
T ss_dssp             -------------------------------TEECCCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             -------------------------------CCcCCCCChhhEEEcCC----------CCEEEeeCCCchhc
Confidence                                           68999999999999744          37999999998754

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.67  E-value=8.3e-17  Score=119.21  Aligned_cols=108  Identities=31%  Similarity=0.612  Sum_probs=95.5

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|++.++.++||||+++++++...+..|+++|+++++++.+++...+.+++.....+..+++.++.++|..   
T Consensus        54 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---  130 (276)
T 2h6d_A           54 VVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---  130 (276)
T ss_dssp             CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34567889999999999999999999999999999999999999988877667788999999999999999998863   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+||+++.+          ..++++|||+++..
T Consensus       131 ------------------------------~i~H~dl~p~Nil~~~~----------~~~~l~dfg~~~~~  161 (276)
T 2h6d_A          131 ------------------------------MVVHRDLKPENVLLDAH----------MNAKIADFGLSNMM  161 (276)
T ss_dssp             ------------------------------CSSCCCCCGGGEEECTT----------SCEEECCCCGGGCC
T ss_pred             ------------------------------CCccCCCChhhEEECCC----------CCEEEeeccccccc
Confidence                                          68999999999999744          37899999998754

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.67  E-value=6.9e-17  Score=123.33  Aligned_cols=110  Identities=25%  Similarity=0.396  Sum_probs=92.8

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+.+|+++++.++||||+++++++......++++|++++++|..++... +.+++.....++.+++.++.++|..
T Consensus        87 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  166 (333)
T 1mqb_A           87 EKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM  166 (333)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            445567889999999999999999999999999999999999999998877543 4678888999999999999998753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+||||+||+++.+          ..++|+|||+++.+
T Consensus       167 ---------------------------------~ivH~Dikp~NIl~~~~----------~~~kl~Dfg~~~~~  197 (333)
T 1mqb_A          167 ---------------------------------NYVHRDLAARNILVNSN----------LVCKVSDFGLSRVL  197 (333)
T ss_dssp             ---------------------------------TCCCSCCCGGGEEECTT----------CCEEECCCCC----
T ss_pred             ---------------------------------CeeCCCCChheEEECCC----------CcEEECCCCcchhh
Confidence                                             68999999999999744          37899999998754

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.67  E-value=7.1e-17  Score=127.50  Aligned_cols=108  Identities=27%  Similarity=0.452  Sum_probs=92.7

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecC-----CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESD-----QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~-----~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      .....+.+|+++|+.++||||+++++++...     ..+|+|+|+++ +++..++.....+++..+..++.+++.++.++
T Consensus        67 ~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~L  145 (432)
T 3n9x_A           67 IDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFI  145 (432)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            4456778999999999999999999988766     57999999886 58887776666789999999999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                 +++||||||+||+++.+          +.+||+|||+++..
T Consensus       146 H~~---------------------------------givHrDlkp~NILl~~~----------~~~kL~DFGla~~~  179 (432)
T 3n9x_A          146 HES---------------------------------GIIHRDLKPANCLLNQD----------CSVKVCDFGLARTI  179 (432)
T ss_dssp             HHT---------------------------------TEECCCCCGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             HHC---------------------------------CCCCCCCCHHHeEECCC----------CCEEEccCCCcccc
Confidence            863                                 68999999999999854          37999999999754

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.67  E-value=8.3e-17  Score=122.69  Aligned_cols=110  Identities=24%  Similarity=0.484  Sum_probs=94.1

Q ss_pred             hhHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----------------CCCHHHHH
Q psy11428          6 KSSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------------TLSEDTIR   68 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~~   68 (160)
                      ......+.+|+++++.+ +||||+++++++...+..|+++|++++++|.+++....                .++.....
T Consensus        81 ~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (334)
T 2pvf_A           81 EKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV  160 (334)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHH
Confidence            44567788999999999 89999999999999999999999999999988765432                36778888


Q ss_pred             HHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEE
Q psy11428         69 IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLK  148 (160)
Q Consensus        69 ~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~  148 (160)
                      .++.+++.++.++|..                                 +++|+|+||+||+++.+          +.++
T Consensus       161 ~i~~qi~~aL~~LH~~---------------------------------~ivH~Dlkp~NIll~~~----------~~~k  197 (334)
T 2pvf_A          161 SCTYQLARGMEYLASQ---------------------------------KCIHRDLAARNVLVTEN----------NVMK  197 (334)
T ss_dssp             HHHHHHHHHHHHHHHT---------------------------------TEECSCCSGGGEEECTT----------CCEE
T ss_pred             HHHHHHHHHHHHHHhC---------------------------------CeeCCCCccceEEEcCC----------CCEE
Confidence            8999999999998753                                 68999999999999744          3799


Q ss_pred             Eeeeeccccc
Q psy11428        149 IADFGFARFL  158 (160)
Q Consensus       149 l~dfg~a~~~  158 (160)
                      |+|||+++.+
T Consensus       198 L~Dfg~~~~~  207 (334)
T 2pvf_A          198 IADFGLARDI  207 (334)
T ss_dssp             ECCCTTCEEC
T ss_pred             Eccccccccc
Confidence            9999998754

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.67  E-value=6.6e-17  Score=123.76  Aligned_cols=107  Identities=29%  Similarity=0.492  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCC-ceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG-DLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|+++++.++||||+++++++...+..++++|++.+| ++..++...+.+++.....+..+++.++.++|..   
T Consensus        73 ~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---  149 (335)
T 3dls_A           73 LGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---  149 (335)
T ss_dssp             TEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            334567999999999999999999999999999999999777 8888777667789999999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       150 ------------------------------~ivH~Dlkp~NIll~~~----------~~~kL~Dfg~a~~~  180 (335)
T 3dls_A          150 ------------------------------DIIHRDIKDENIVIAED----------FTIKLIDFGSAAYL  180 (335)
T ss_dssp             ------------------------------TEECSCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             ------------------------------CeEEeccCHHHEEEcCC----------CcEEEeecccceEC
Confidence                                          68999999999999754          37999999999754

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.67  E-value=7.2e-17  Score=121.79  Aligned_cols=111  Identities=30%  Similarity=0.425  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|+++++++ +||||+++++++.+++..|+++|+++++++..++...+.+++.....++.+++.++.++|..  
T Consensus        53 ~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~--  130 (316)
T 2ac3_A           53 IRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK--  130 (316)
T ss_dssp             CHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             hHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            345677899999884 79999999999999999999999999999998887777789999999999999999998853  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|||+||+||+++.++       ....++|+|||+++.+
T Consensus       131 -------------------------------~ivH~dlkp~Nil~~~~~-------~~~~~kl~Dfg~~~~~  164 (316)
T 2ac3_A          131 -------------------------------GIAHRDLKPENILCEHPN-------QVSPVKICDFDLGSGI  164 (316)
T ss_dssp             -------------------------------TCCCCCCCGGGEEESCSS-------SSCSEEECCTTCCC--
T ss_pred             -------------------------------CceeCCCCHHHEEEccCC-------CcCceEEEEccCcccc
Confidence                                           689999999999998543       2235899999998643

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.67  E-value=6.7e-17  Score=128.31  Aligned_cols=108  Identities=31%  Similarity=0.499  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCC-cEEEEEEEeCCCceeEEEeeecC--CCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQ-HVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~-~~~lv~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ....+.+|+++++.++||||+++++++.... ..|+++||+++|+|.+++...+.  ++......+..+++.++.++|..
T Consensus       229 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~  308 (450)
T 1k9a_A          229 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN  308 (450)
T ss_dssp             TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3456788999999999999999999876554 79999999999999988765543  67888888999999999998753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++||||||+||+++.+          ..+||+|||+++..
T Consensus       309 ---------------------------------~ivHrDlkp~Nill~~~----------~~~kl~DfG~a~~~  339 (450)
T 1k9a_A          309 ---------------------------------NFVHRDLAARNVLVSED----------NVAKVSDFGLTKEA  339 (450)
T ss_dssp             ---------------------------------TEECSCCCGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             ---------------------------------CeeCCCCCHhhEEECCC----------CCEEEeeCCCcccc
Confidence                                             68999999999999744          37999999998743

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.67  E-value=8.4e-17  Score=119.85  Aligned_cols=110  Identities=28%  Similarity=0.454  Sum_probs=94.9

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ......+.+|+++++.++||||+++++++......|+++|+++++++.+++...  ..+++.....++.+++.++.++|.
T Consensus        50 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~  129 (288)
T 3kfa_A           50 TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK  129 (288)
T ss_dssp             STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHH
Confidence            345567889999999999999999999999999999999999999998877543  347888888899999999999886


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       130 ~---------------------------------~i~H~dikp~Nil~~~~----------~~~~l~Dfg~~~~~  161 (288)
T 3kfa_A          130 K---------------------------------NFIHRDLAARNCLVGEN----------HLVKVADFGLSRLM  161 (288)
T ss_dssp             H---------------------------------TCCCSCCSGGGEEECGG----------GCEEECCCCGGGTS
T ss_pred             C---------------------------------CccCCCCCcceEEEcCC----------CCEEEccCccceec
Confidence            4                                 68999999999999754          37999999998754

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.67  E-value=4.9e-17  Score=129.15  Aligned_cols=108  Identities=31%  Similarity=0.492  Sum_probs=92.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....+.+|+++++.++||||+++++++. ....|+++|++++|+|.+++...  ..++......+..+++.++.++|.. 
T Consensus       226 ~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-  303 (454)
T 1qcf_A          226 SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR-  303 (454)
T ss_dssp             CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            4567889999999999999999999886 66789999999999999887643  2567788888999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      +++||||||+||+++.+          ..+||+|||+++.+.
T Consensus       304 --------------------------------~ivHrDlkp~Nill~~~----------~~~kl~DFG~a~~~~  335 (454)
T 1qcf_A          304 --------------------------------NYIHRDLRAANILVSAS----------LVCKIADFGLARVIE  335 (454)
T ss_dssp             --------------------------------TCCCSSCSGGGEEECTT----------CCEEECSTTGGGGBC
T ss_pred             --------------------------------CccCCCCCHHHEEECCC----------CcEEEeeCCCceEcC
Confidence                                            68999999999999854          379999999998653

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.67  E-value=1e-16  Score=131.85  Aligned_cols=108  Identities=28%  Similarity=0.463  Sum_probs=93.6

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+.+|+++++.++||||+++++++.. ...++|+||+++|+|..++... +.+++.....++.+++.++.++|.. 
T Consensus       378 ~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-  455 (613)
T 2ozo_A          378 ADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK-  455 (613)
T ss_dssp             TTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            456778899999999999999999999876 5699999999999998877543 4578889999999999999998853 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++||||||+||+++.+          ..+||+|||+++.+
T Consensus       456 --------------------------------~iiHrDlkp~NILl~~~----------~~vkL~DFGla~~~  486 (613)
T 2ozo_A          456 --------------------------------NFVHRNLAARNVLLVNR----------HYAKISDFGLSKAL  486 (613)
T ss_dssp             --------------------------------TCCCSCCSGGGEEEEET----------TEEEECCCSTTTTC
T ss_pred             --------------------------------CEEcCcCCHHHEEEcCC----------CcEEEeeccCcccc
Confidence                                            68999999999999854          38999999999764

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.67  E-value=1.7e-16  Score=117.39  Aligned_cols=108  Identities=31%  Similarity=0.502  Sum_probs=95.2

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|+++++.++||||+++++++..+...|+++|+++++++.+++.....+++.....+..+++.++.++|..  
T Consensus        47 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--  124 (276)
T 2yex_A           47 DCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI--  124 (276)
T ss_dssp             THHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             hhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            345677889999999999999999999999999999999999999988877666788999999999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++|+|++|+||+++.+          +.++++|||+++.
T Consensus       125 -------------------------------~i~H~dl~p~Nil~~~~----------~~~kl~dfg~~~~  154 (276)
T 2yex_A          125 -------------------------------GITHRDIKPENLLLDER----------DNLKISDFGLATV  154 (276)
T ss_dssp             -------------------------------TEECSCCSGGGEEECTT----------CCEEECCCTTCEE
T ss_pred             -------------------------------CeeccCCChHHEEEccC----------CCEEEeeCCCccc
Confidence                                           68999999999999854          3789999999864

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.67  E-value=1.1e-16  Score=119.71  Aligned_cols=108  Identities=25%  Similarity=0.368  Sum_probs=94.5

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|+++++.++||||+++++++ ..+..++++|+++++++..++...+.+++.....+..+++.++.++|..  
T Consensus        60 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~--  136 (291)
T 1xbb_A           60 ALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES--  136 (291)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            3466788999999999999999999988 5678899999999999998887767788999999999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|+||+||+++.++          .++|+|||+++.+
T Consensus       137 -------------------------------~i~H~dikp~Nil~~~~~----------~~kl~Dfg~~~~~  167 (291)
T 1xbb_A          137 -------------------------------NFVHRDLAARNVLLVTQH----------YAKISDFGLSKAL  167 (291)
T ss_dssp             -------------------------------TEECSCCSGGGEEEEETT----------EEEECCCTTCEEC
T ss_pred             -------------------------------CeEcCCCCcceEEEeCCC----------cEEEccCCcceee
Confidence                                           689999999999998543          7999999998754

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.67  E-value=9.1e-17  Score=121.81  Aligned_cols=109  Identities=30%  Similarity=0.576  Sum_probs=91.8

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+.+|+++++.++||||+++++++..+. .|+++|+++++++.+++...+.+++.....+..+++.++.++|..    
T Consensus        59 ~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~----  133 (322)
T 2ycf_A           59 ALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN----  133 (322)
T ss_dssp             --CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             hhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            345778999999999999999999887654 899999999999988776667788999999999999999998753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|+|+||+||+++.++       ....++|+|||+++..
T Consensus       134 -----------------------------~ivH~dlkp~NIl~~~~~-------~~~~~kl~Dfg~~~~~  167 (322)
T 2ycf_A          134 -----------------------------GIIHRDLKPENVLLSSQE-------EDCLIKITDFGHSKIL  167 (322)
T ss_dssp             -----------------------------TEECCCCSGGGEEESSSS-------SSCCEEECCCTTCEEC
T ss_pred             -----------------------------CeeccCCCHHHEEEecCC-------CCCeEEEccCccceec
Confidence                                         689999999999998543       2346899999998754

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.66  E-value=7.2e-17  Score=120.21  Aligned_cols=107  Identities=28%  Similarity=0.541  Sum_probs=94.2

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+.+|+++++.++||||+++++++.++...|+++|+++++++..++...+.+++.....+..+++.++.++|..    
T Consensus        58 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~----  133 (284)
T 2vgo_A           58 EHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER----  133 (284)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT----
T ss_pred             HHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            4567889999999999999999999999999999999999999988877667788999999999999999988753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|+|++|+||+++.+          +.++|+|||++...
T Consensus       134 -----------------------------~i~H~dl~p~Nil~~~~----------~~~kl~Dfg~~~~~  164 (284)
T 2vgo_A          134 -----------------------------KVIHRDIKPENLLMGYK----------GELKIADFGWSVHA  164 (284)
T ss_dssp             -----------------------------TEECCCCSGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             -----------------------------CceecCCCHHHEEEcCC----------CCEEEecccccccC
Confidence                                         68999999999999744          37899999988543

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.66  E-value=6.4e-17  Score=120.21  Aligned_cols=106  Identities=29%  Similarity=0.497  Sum_probs=93.4

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+++|+++++.++||||+++++++.+....++++|+++++++..++...+.+++.....+..+++.++.++|..    
T Consensus        53 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~----  128 (279)
T 3fdn_A           53 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----  128 (279)
T ss_dssp             HHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT----
T ss_pred             HHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            4567789999999999999999999999999999999999999988776667788899999999999999988753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                   +++|+|+||+||+++.+          +.++|+|||++..
T Consensus       129 -----------------------------~i~H~dlkp~Nili~~~----------~~~~l~Dfg~~~~  158 (279)
T 3fdn_A          129 -----------------------------RVIHRDIKPENLLLGSA----------GELKIADFGWSVH  158 (279)
T ss_dssp             -----------------------------TCEECCCCGGGEEECTT----------SCEEECSCCEESC
T ss_pred             -----------------------------CEecccCChHhEEEcCC----------CCEEEEecccccc
Confidence                                         68999999999999754          3799999998754

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.66  E-value=1.4e-16  Score=119.02  Aligned_cols=114  Identities=29%  Similarity=0.441  Sum_probs=94.8

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeec----CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~----~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      +.+....+.+|+++++.++||||+++++++..    ....++++|+++++++..++...+.++......++.+++.++.+
T Consensus        65 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~  144 (290)
T 1t4h_A           65 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQF  144 (290)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHH
Confidence            45566778899999999999999999998764    45689999999999999888766778899999999999999998


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|...                               .+++|+|+||+||+++..         +..++|+|||++...
T Consensus       145 lH~~~-------------------------------~~i~H~dikp~Nil~~~~---------~~~~kl~Dfg~~~~~  182 (290)
T 1t4h_A          145 LHTRT-------------------------------PPIIHRDLKCDNIFITGP---------TGSVKIGDLGLATLK  182 (290)
T ss_dssp             HHTSS-------------------------------SCCCCSCCCGGGEEESST---------TSCEEECCTTGGGGC
T ss_pred             HHcCC-------------------------------CCEEECCCCHHHEEEECC---------CCCEEEeeCCCcccc
Confidence            87530                               138999999999999732         237899999998643

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.66  E-value=1.1e-16  Score=121.61  Aligned_cols=107  Identities=29%  Similarity=0.501  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+.+++.++||||+++++.+......++++||++++++.+++. ...+++.....+..+++.++.++|..   
T Consensus        85 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~-~~~l~~~~~~~i~~qi~~~L~~LH~~---  160 (321)
T 2c30_A           85 RRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQ---  160 (321)
T ss_dssp             SHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCCHHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            45567889999999999999999999999999999999999999987654 34688889999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       161 ------------------------------~ivH~Dlkp~NIll~~~----------~~~kl~Dfg~~~~~  191 (321)
T 2c30_A          161 ------------------------------GVIHRDIKSDSILLTLD----------GRVKLSDFGFCAQI  191 (321)
T ss_dssp             ------------------------------TEECCCCSGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             ------------------------------CeecCCCCHHHEEECCC----------CcEEEeeeeeeeec
Confidence                                          68999999999999854          37899999998654

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.66  E-value=6.6e-17  Score=124.34  Aligned_cols=110  Identities=26%  Similarity=0.401  Sum_probs=96.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+.+|+++++.++||||+++++++..++..|+++||+++++|..++...+.+++.....+..+++.++.++|...
T Consensus        72 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~  151 (360)
T 3eqc_A           72 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH  151 (360)
T ss_dssp             HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            44556788999999999999999999999999999999999999999988877778899999999999999999887521


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                      +++|+|+||+||+++.+          ..++|+|||+++.
T Consensus       152 --------------------------------~i~H~dlkp~Nil~~~~----------~~~kl~Dfg~~~~  181 (360)
T 3eqc_A          152 --------------------------------KIMHRDVKPSNILVNSR----------GEIKLCDFGVSGQ  181 (360)
T ss_dssp             --------------------------------CCCCSCCSGGGEEECTT----------CCEEECCCCCCHH
T ss_pred             --------------------------------CEEcCCccHHHEEECCC----------CCEEEEECCCCcc
Confidence                                            58999999999999854          3789999999863

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.66  E-value=9.9e-17  Score=121.66  Aligned_cols=112  Identities=34%  Similarity=0.520  Sum_probs=96.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+.+++.++||||+++++++......++++|+++++++.+++...+.+++.....+..+++.++.++|..   
T Consensus        58 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---  134 (321)
T 2a2a_A           58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---  134 (321)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             hHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            35667889999999999999999999999999999999999999998887667788999999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|+||+||+++.++.      ....++|+|||+++.+
T Consensus       135 ------------------------------~ivH~dikp~NIl~~~~~~------~~~~~kl~Dfg~~~~~  169 (321)
T 2a2a_A          135 ------------------------------KIAHFDLKPENIMLLDKNI------PIPHIKLIDFGLAHEI  169 (321)
T ss_dssp             ------------------------------TEECCCCSGGGEEESCTTS------SSCCEEECCCTTCEEC
T ss_pred             ------------------------------CeecCCCChHHEEEecCCC------CcCCEEEccCccceec
Confidence                                          6899999999999985431      1226899999998754

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.66  E-value=1.1e-16  Score=123.11  Aligned_cols=109  Identities=30%  Similarity=0.461  Sum_probs=91.5

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe-eecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+.+|+++++.++||||+++++++..+...|+|+||+.| ++...+. ..+.+++.....+..+++.++.++|..
T Consensus        95 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  173 (348)
T 1u5q_A           95 NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH  173 (348)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34556788999999999999999999999999999999999974 5554443 245678888999999999999998753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++||||||+||+++.+          +.++|+|||+++..
T Consensus       174 ---------------------------------~ivH~Dlkp~NIll~~~----------~~~kL~DfG~a~~~  204 (348)
T 1u5q_A          174 ---------------------------------NMIHRDVKAGNILLSEP----------GLVKLGDFGSASIM  204 (348)
T ss_dssp             ---------------------------------TCBCCCCSGGGEEEETT----------TEEEECCCTTCBSS
T ss_pred             ---------------------------------CeeeCCCCHHHEEECCC----------CCEEEeeccCceec
Confidence                                             68999999999999854          38999999998754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.66  E-value=8.8e-17  Score=122.39  Aligned_cols=108  Identities=25%  Similarity=0.378  Sum_probs=91.9

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+.+|+.+++.++||||+++++++..+ ..+++++++.+|++..++.. .+.+++.....+..+++.++.++|.. 
T Consensus        59 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~-  136 (327)
T 3poz_A           59 KANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR-  136 (327)
T ss_dssp             -CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC-
Confidence            4456788899999999999999999998765 47899999999999887765 35678888899999999999998853 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|||+||+||+++.++          .+||+|||+++.+
T Consensus       137 --------------------------------~ivH~Dikp~NIll~~~~----------~~kl~Dfg~a~~~  167 (327)
T 3poz_A          137 --------------------------------RLVHRDLAARNVLVKTPQ----------HVKITDFGLAKLL  167 (327)
T ss_dssp             --------------------------------TCCCSCCCGGGEEEEETT----------EEEECCTTHHHHH
T ss_pred             --------------------------------CeeCCCCChheEEECCCC----------CEEEccCcceeEc
Confidence                                            689999999999998543          7999999998754

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.66  E-value=1.2e-16  Score=119.75  Aligned_cols=110  Identities=25%  Similarity=0.398  Sum_probs=92.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeee-eecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHC-KESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~-~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ......+.+|+++++.++||||+++++. +..++..++++|++++++|.+++... ..++......+..+++.++.++|.
T Consensus        67 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~  146 (298)
T 3f66_A           67 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS  146 (298)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4456778899999999999999999997 45667889999999999998887543 346788888899999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       147 ~---------------------------------~i~H~dikp~Nil~~~~----------~~~kl~Dfg~a~~~  178 (298)
T 3f66_A          147 K---------------------------------KFVHRDLAARNCMLDEK----------FTVKVADFGLARDM  178 (298)
T ss_dssp             T---------------------------------TCCCSCCSGGGEEECTT----------CCEEECSCGGGCCC
T ss_pred             C---------------------------------CccCCCCchheEEECCC----------CCEEECcccccccc
Confidence            3                                 68999999999999744          37999999998754

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.66  E-value=7.6e-17  Score=122.60  Aligned_cols=109  Identities=33%  Similarity=0.498  Sum_probs=93.7

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--------------cCCCHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--------------GTLSEDTIRIFL   71 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--------------~~~~~~~~~~~~   71 (160)
                      .....+.+|+++++.+ +||||+++++++...+..|+++|++++|+|.+++...              ..++......+.
T Consensus        91 ~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (333)
T 2i1m_A           91 DEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFS  170 (333)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHH
Confidence            4567788999999999 8999999999999999999999999999998876532              246788888899


Q ss_pred             HHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEee
Q psy11428         72 KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIAD  151 (160)
Q Consensus        72 ~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~d  151 (160)
                      .+++.++.++|..                                 +++|+||||+||+++.+          ..++|+|
T Consensus       171 ~qi~~~l~~lH~~---------------------------------~ivH~Dlkp~NIl~~~~----------~~~kl~D  207 (333)
T 2i1m_A          171 SQVAQGMAFLASK---------------------------------NCIHRDVAARNVLLTNG----------HVAKIGD  207 (333)
T ss_dssp             HHHHHHHHHHHHT---------------------------------TEECSCCSGGGCEEEGG----------GEEEBCC
T ss_pred             HHHHHHHHHHhcC---------------------------------CcccCCcccceEEECCC----------CeEEECc
Confidence            9999999998753                                 68999999999999854          4899999


Q ss_pred             eeccccc
Q psy11428        152 FGFARFL  158 (160)
Q Consensus       152 fg~a~~~  158 (160)
                      ||+++.+
T Consensus       208 fg~~~~~  214 (333)
T 2i1m_A          208 FGLARDI  214 (333)
T ss_dssp             CGGGCCG
T ss_pred             ccccccc
Confidence            9998753

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.66  E-value=1.9e-16  Score=117.62  Aligned_cols=112  Identities=36%  Similarity=0.563  Sum_probs=96.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+.+++.++||||+++++.+......++++|+++++++..++...+.+++.....+..+++.++.++|..   
T Consensus        51 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---  127 (283)
T 3bhy_A           51 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---  127 (283)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            35677889999999999999999999999999999999999999998877667789999999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+||+++.++      .....++|+|||+++..
T Consensus       128 ------------------------------~i~H~dl~p~Nil~~~~~------~~~~~~kl~dfg~~~~~  162 (283)
T 3bhy_A          128 ------------------------------RIAHFDLKPENIMLLDKN------VPNPRIKLIDFGIAHKI  162 (283)
T ss_dssp             ------------------------------TEECSCCSGGGEEESCSS------SSSCCEEECCCTTCEEC
T ss_pred             ------------------------------CccCCCCChHHEEEecCC------CCCCceEEEecccceec
Confidence                                          689999999999998542      12347899999998654

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.66  E-value=1.1e-16  Score=120.89  Aligned_cols=108  Identities=31%  Similarity=0.379  Sum_probs=93.2

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+.+++.++||||+++++++..++..|+++|++++++|..++...+.+++.....+..+++.++.++|..   
T Consensus        77 ~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---  153 (309)
T 2h34_A           77 FRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---  153 (309)
T ss_dssp             HHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            45678889999999999999999999999999999999999999998877667789999999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|++|+||+++.+          ..++|+|||+++..
T Consensus       154 ------------------------------~i~H~dlkp~NIl~~~~----------~~~kl~Dfg~~~~~  184 (309)
T 2h34_A          154 ------------------------------GATHRDVKPENILVSAD----------DFAYLVDFGIASAT  184 (309)
T ss_dssp             ------------------------------TCCCSCCCGGGEEECTT----------SCEEECSCCC----
T ss_pred             ------------------------------cCCcCCCChHHEEEcCC----------CCEEEecCccCccc
Confidence                                          68999999999999754          37899999998643

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.66  E-value=1.3e-16  Score=118.36  Aligned_cols=107  Identities=35%  Similarity=0.629  Sum_probs=93.5

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+++|+++++.++||||+++++.+......|+++|+++++++..++... +.+++.....+..+++.++.++|..   
T Consensus        55 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---  131 (278)
T 3cok_A           55 VQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---  131 (278)
T ss_dssp             HHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            467888999999999999999999999999999999999999998876544 5678889999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       132 ------------------------------~i~H~dl~p~Nili~~~----------~~~kl~dfg~~~~~  162 (278)
T 3cok_A          132 ------------------------------GILHRDLTLSNLLLTRN----------MNIKIADFGLATQL  162 (278)
T ss_dssp             ------------------------------TEECSSCCGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             ------------------------------CeecCCCCHHHEEEcCC----------CCEEEEeecceeec
Confidence                                          68999999999999754          37899999998653

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.66  E-value=1.1e-16  Score=133.02  Aligned_cols=107  Identities=30%  Similarity=0.428  Sum_probs=94.5

Q ss_pred             HHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .+.....|.+++..+ +||+|+.+++++.+...+|+||||+++|+|..++...+.+++.....++.+++.++.++|..  
T Consensus       384 ~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--  461 (674)
T 3pfq_A          384 DVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK--  461 (674)
T ss_dssp             TTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            445667788888877 79999999999999999999999999999998887778899999999999999999998853  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++||||||+||+++.+          +.+||+|||+++.
T Consensus       462 -------------------------------gIiHrDLKp~NILl~~~----------g~ikL~DFGla~~  491 (674)
T 3pfq_A          462 -------------------------------GIIYRDLKLDNVMLDSE----------GHIKIADFGMCKE  491 (674)
T ss_dssp             -------------------------------SEECCCCCSTTEEECSS----------SCEEECCCTTCEE
T ss_pred             -------------------------------CeEeccCChhhEEEcCC----------CcEEEeecceeec
Confidence                                           68999999999999854          3799999999874

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.66  E-value=6.5e-17  Score=122.88  Aligned_cols=108  Identities=32%  Similarity=0.505  Sum_probs=92.3

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----------------CCCHHHHHH
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------------TLSEDTIRI   69 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----------------~~~~~~~~~   69 (160)
                      .....+.+|+++++.+ +||||+++++++...+..|+++|++++++|.+++...+                .+++.....
T Consensus        67 ~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (327)
T 1fvr_A           67 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH  146 (327)
T ss_dssp             ---CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHH
Confidence            3455678899999999 89999999999999999999999999999988875443                578888999


Q ss_pred             HHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEE
Q psy11428         70 FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKI  149 (160)
Q Consensus        70 ~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l  149 (160)
                      ++.+++.++.++|..                                 +++|+|+||+||+++.+          ..++|
T Consensus       147 i~~qi~~aL~~LH~~---------------------------------~ivH~dlkp~NIl~~~~----------~~~kL  183 (327)
T 1fvr_A          147 FAADVARGMDYLSQK---------------------------------QFIHRDLAARNILVGEN----------YVAKI  183 (327)
T ss_dssp             HHHHHHHHHHHHHHT---------------------------------TEECSCCSGGGEEECGG----------GCEEE
T ss_pred             HHHHHHHHHHHHHhC---------------------------------CccCCCCccceEEEcCC----------CeEEE
Confidence            999999999998753                                 68999999999999754          37999


Q ss_pred             eeeecccc
Q psy11428        150 ADFGFARF  157 (160)
Q Consensus       150 ~dfg~a~~  157 (160)
                      +|||+++.
T Consensus       184 ~Dfg~~~~  191 (327)
T 1fvr_A          184 ADFGLSRG  191 (327)
T ss_dssp             CCTTCEES
T ss_pred             cccCcCcc
Confidence            99999863

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.66  E-value=1.2e-16  Score=121.62  Aligned_cols=108  Identities=36%  Similarity=0.545  Sum_probs=92.1

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++||||+++++++......|+++|+++++.+..+....+.+++.....+..+++.++.++|..   
T Consensus        67 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---  143 (331)
T 4aaa_A           67 VKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---  143 (331)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            34567789999999999999999999999999999999999988877655556788899999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|+||+||+++.+          +.++|+|||+++.+
T Consensus       144 ------------------------------~ivH~dlkp~Nil~~~~----------~~~kl~Dfg~~~~~  174 (331)
T 4aaa_A          144 ------------------------------NIIHRDIKPENILVSQS----------GVVKLCDFGFARTL  174 (331)
T ss_dssp             ------------------------------TCCCCCCCGGGEEECTT----------SCEEECCCTTC---
T ss_pred             ------------------------------CEEccCcChheEEEcCC----------CcEEEEeCCCceee
Confidence                                          68999999999999744          37999999998643

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.65  E-value=1.5e-16  Score=120.90  Aligned_cols=105  Identities=26%  Similarity=0.405  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+.+++.++||||+++++++. ....++++++++++++..++... +.+++.....+..+++.++.++|..    
T Consensus        60 ~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~----  134 (325)
T 3kex_A           60 QAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH----  134 (325)
T ss_dssp             CSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            34567889999999999999999886 46789999999999998877653 5688888999999999999998853    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|||+||+||+++.+          ..++|+|||+++.+
T Consensus       135 -----------------------------~ivH~Dikp~Nil~~~~----------~~~kl~Dfg~a~~~  165 (325)
T 3kex_A          135 -----------------------------GMVHRNLAARNVLLKSP----------SQVQVADFGVADLL  165 (325)
T ss_dssp             -----------------------------TCCCSCCSSTTEEESSS----------SCEEECSCSGGGGS
T ss_pred             -----------------------------CCCCCccchheEEECCC----------CeEEECCCCccccc
Confidence                                         68999999999999754          37999999999764

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.65  E-value=2.2e-16  Score=118.63  Aligned_cols=110  Identities=28%  Similarity=0.379  Sum_probs=94.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee---ecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS---KGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ......+.+|+++++.++||||+++++++......++++|+++++++..++..   ...+++.....+..+++.++.++|
T Consensus        71 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH  150 (307)
T 2nru_A           71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH  150 (307)
T ss_dssp             TTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence            34567788999999999999999999999999999999999999999877643   234788888889999999999987


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       151 ~~---------------------------------~i~H~dlkp~Nili~~~----------~~~kl~Dfg~~~~~  183 (307)
T 2nru_A          151 EN---------------------------------HHIHRDIKSANILLDEA----------FTAKISDFGLARAS  183 (307)
T ss_dssp             HT---------------------------------TEECSCCCGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             cC---------------------------------CeecCCCCHHHEEEcCC----------CcEEEeeccccccc
Confidence            53                                 68999999999999744          37899999998643

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.65  E-value=2.3e-16  Score=119.57  Aligned_cols=108  Identities=29%  Similarity=0.490  Sum_probs=92.7

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .....+.+|+++++.++||||+++++++.+.  ...++++|++++++|.+++.. ..+++.....++.+++.++.++|..
T Consensus        75 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~i~~~l~~~l~~LH~~  153 (318)
T 3lxp_A           75 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR-HSIGLAQLLLFAQQICEGMAYLHAQ  153 (318)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGG-SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhh-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            4466788999999999999999999998874  678999999999999887754 3488888999999999999998853


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       154 ---------------------------------~ivH~Dikp~Nil~~~~----------~~~kl~Dfg~a~~~  184 (318)
T 3lxp_A          154 ---------------------------------HYIHRDLAARNVLLDND----------RLVKIGDFGLAKAV  184 (318)
T ss_dssp             ---------------------------------TEECSCCSGGGEEECTT----------CCEEECCGGGCEEC
T ss_pred             ---------------------------------CccCCCCchheEEEcCC----------CCEEECCccccccc
Confidence                                             68999999999999754          37999999998754

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.65  E-value=1.6e-16  Score=120.50  Aligned_cols=106  Identities=35%  Similarity=0.574  Sum_probs=89.3

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee------cCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK------GTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~------~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ...+.+|+++++.++||||+++++++..++..|+++||++ +++..++...      ..+++..+..+..+++.++.++|
T Consensus        47 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH  125 (317)
T 2pmi_A           47 PSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH  125 (317)
T ss_dssp             CHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999999998 4776665432      24778888889999999999987


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++||||||+||+++.+          +.+||+|||+++.+
T Consensus       126 ~~---------------------------------~ivH~Dlkp~NIl~~~~----------~~~kl~Dfg~~~~~  158 (317)
T 2pmi_A          126 EN---------------------------------KILHRDLKPQNLLINKR----------GQLKLGDFGLARAF  158 (317)
T ss_dssp             HT---------------------------------TEECCCCCGGGEEECTT----------CCEEECCCSSCEET
T ss_pred             HC---------------------------------CeeeCCCChHHeEEcCC----------CCEEECcCccceec
Confidence            53                                 68999999999999854          37899999998754

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=1.3e-16  Score=119.19  Aligned_cols=110  Identities=24%  Similarity=0.368  Sum_probs=92.9

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcE-EEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHV-YLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~-~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ......+.+|+++++.++||||+++++++...... +++++++.++++..++.. ...+++.....+..+++.++.++|.
T Consensus        63 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~  142 (298)
T 3pls_A           63 MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE  142 (298)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            34567788999999999999999999998766555 999999999999888765 3457788888899999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|+||+||+++.+          +.++|+|||+++.+
T Consensus       143 ~---------------------------------~i~H~dikp~Nili~~~----------~~~kl~Dfg~~~~~  174 (298)
T 3pls_A          143 Q---------------------------------KFVHRDLAARNCMLDES----------FTVKVADFGLARDI  174 (298)
T ss_dssp             T---------------------------------TCCCSCCSGGGEEECTT----------CCEEECCTTSSCTT
T ss_pred             C---------------------------------CcccCCCCcceEEEcCC----------CcEEeCcCCCcccc
Confidence            3                                 68999999999999744          37999999998643

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.65  E-value=2.5e-16  Score=117.81  Aligned_cols=108  Identities=35%  Similarity=0.588  Sum_probs=94.8

Q ss_pred             HHHHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|+++++++. ||||+++++++......++++|+++++++.+++.....+++.....+..+++.++.++|..  
T Consensus        66 ~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~--  143 (298)
T 1phk_A           66 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL--  143 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            3456778999999996 9999999999999999999999999999998887777789999999999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+||+++.+          +.++|+|||+++.+
T Consensus       144 -------------------------------~i~H~dl~p~Nil~~~~----------~~~kl~dfg~~~~~  174 (298)
T 1phk_A          144 -------------------------------NIVHRDLKPENILLDDD----------MNIKLTDFGFSCQL  174 (298)
T ss_dssp             -------------------------------TEECSCCSGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             -------------------------------CcccCCCCcceEEEcCC----------CcEEEecccchhhc
Confidence                                           68999999999999754          37899999998653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.65  E-value=2.7e-16  Score=119.47  Aligned_cols=110  Identities=30%  Similarity=0.474  Sum_probs=93.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeee--cCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKE--SDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~--~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ......+++|+++++.++||||+++++++.  .....|+++||+++++|.+++.. .+.+++.....+..+++.++.++|
T Consensus        65 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH  144 (327)
T 3lxl_A           65 PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG  144 (327)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            345567889999999999999999999776  45679999999999999888765 345888999999999999999987


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|+||+||+++.++          .++|+|||+++..
T Consensus       145 ~~---------------------------------~ivH~Dikp~NIl~~~~~----------~~kl~Dfg~~~~~  177 (327)
T 3lxl_A          145 SR---------------------------------RCVHRDLAARNILVESEA----------HVKIADFGLAKLL  177 (327)
T ss_dssp             HT---------------------------------TEECSCCSGGGEEEEETT----------EEEECCGGGCEEC
T ss_pred             hC---------------------------------CccCCCCChhhEEECCCC----------CEEEcccccceec
Confidence            53                                 689999999999998543          7999999998754

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.65  E-value=1.2e-16  Score=121.38  Aligned_cols=117  Identities=22%  Similarity=0.382  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCC----cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQ----HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~----~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      .......|+.+++.++||||+++++++....    ..|+++||+++|+|..++.. ..+++.....+..+++.++.++|.
T Consensus        61 ~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~  139 (322)
T 3soc_A           61 QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHE  139 (322)
T ss_dssp             HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHh
Confidence            3344556888899999999999999887644    47999999999999988754 458888999999999999998864


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .-      -              .+++++.   .+++|||+||+||+++.+          ..+||+|||+++.+
T Consensus       140 ~~------~--------------~l~~~~~---~~ivH~Dlkp~Nill~~~----------~~~kL~DFg~a~~~  181 (322)
T 3soc_A          140 DI------P--------------GLKDGHK---PAISHRDIKSKNVLLKNN----------LTACIADFGLALKF  181 (322)
T ss_dssp             CE------E--------------EETTEEE---CEEECSCCSGGGEEECTT----------CCEEECCCTTCEEE
T ss_pred             hc------c--------------ccccccC---CCEEeCCCChHhEEECCC----------CeEEEccCCccccc
Confidence            20      0              0001110   268999999999999744          37999999999654

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.65  E-value=1.1e-16  Score=123.37  Aligned_cols=115  Identities=17%  Similarity=0.208  Sum_probs=88.4

Q ss_pred             HHHHHHHHHhhcC---CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-----ecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428         11 LTRHILKELTELH---HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-----KGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus        11 ~~~~~~~~l~~l~---h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      .+..|.++++.++   |+|++++++++..++..|+||||+++|+|.+++..     .+.+++..+..++.+++.++.++|
T Consensus       110 ~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH  189 (365)
T 3e7e_A          110 EFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH  189 (365)
T ss_dssp             HHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh
Confidence            3445555555554   99999999999999999999999999999988753     346888999999999999999987


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCC-CCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQY-PQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~-~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++||||||+||+++.++.... +.+....+||+|||+++.+
T Consensus       190 ~~---------------------------------~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~  233 (365)
T 3e7e_A          190 DC---------------------------------EIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDM  233 (365)
T ss_dssp             TT---------------------------------TEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEG
T ss_pred             hC---------------------------------CeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhh
Confidence            53                                 6899999999999975110000 0112457999999999643

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.65  E-value=1e-16  Score=121.26  Aligned_cols=109  Identities=26%  Similarity=0.399  Sum_probs=92.7

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----------cCCCHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----------GTLSEDTIRIFLKQIVQ   76 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----------~~~~~~~~~~~~~~~~~   76 (160)
                      .....+.+|+++++.++||||+++++++......++++|++++++|.+++...          ..++......+..+++.
T Consensus        70 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~  149 (322)
T 1p4o_A           70 RERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIAD  149 (322)
T ss_dssp             HHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHH
Confidence            44556788999999999999999999999999999999999999998877542          23477788888999999


Q ss_pred             HHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         77 ALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        77 ~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      ++.++|..                                 +++|||+||+||+++.+          +.++|+|||+++
T Consensus       150 ~l~~lH~~---------------------------------~i~H~dikp~NIli~~~----------~~~kl~Dfg~~~  186 (322)
T 1p4o_A          150 GMAYLNAN---------------------------------KFVHRDLAARNCMVAED----------FTVKIGDFGMTR  186 (322)
T ss_dssp             HHHHHHHT---------------------------------TCBCSCCSGGGEEECTT----------CCEEECCTTCCC
T ss_pred             HHHHHHHC---------------------------------CCccCCCccceEEEcCC----------CeEEECcCcccc
Confidence            99998753                                 68999999999999854          379999999986


Q ss_pred             cc
Q psy11428        157 FL  158 (160)
Q Consensus       157 ~~  158 (160)
                      ..
T Consensus       187 ~~  188 (322)
T 1p4o_A          187 DI  188 (322)
T ss_dssp             GG
T ss_pred             cc
Confidence            43

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.65  E-value=7.1e-17  Score=123.01  Aligned_cols=111  Identities=34%  Similarity=0.523  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+.+|+++++.++||||+++++++..+...|+++||+++ ++..++...+.+++..+..++.+++.++.++|..    
T Consensus        77 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~----  151 (329)
T 3gbz_A           77 PGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR----  151 (329)
T ss_dssp             ---CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             chhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            44566899999999999999999999999999999999975 8877776667789999999999999999998863    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++||||||+||+++.++     .+....++|+|||+++.+
T Consensus       152 -----------------------------~ivH~Dlkp~NIll~~~~-----~~~~~~~kl~Dfg~a~~~  187 (329)
T 3gbz_A          152 -----------------------------RCLHRDLKPQNLLLSVSD-----ASETPVLKIGDFGLARAF  187 (329)
T ss_dssp             -----------------------------TCCCSCCCGGGEEEEC----------CCEEEECCTTHHHHH
T ss_pred             -----------------------------CEECCCCCHHHEEEecCC-----CCccceEEECcCCCcccc
Confidence                                         689999999999997432     123456899999998643

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=8.3e-17  Score=125.04  Aligned_cols=110  Identities=25%  Similarity=0.395  Sum_probs=88.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeee-ecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCK-ESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~-~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ......+.+|+.+++.++||||+++++++ ..++..|+++||+++++|.+++... ..++......+..+++.++.++|.
T Consensus       131 ~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~  210 (373)
T 3c1x_A          131 IGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS  210 (373)
T ss_dssp             SHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            35567788999999999999999999975 4556889999999999999887654 346778888889999999999875


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|||+||+||+++.+          ..+||+|||+++.+
T Consensus       211 ~---------------------------------~ivHrDlkp~NIll~~~----------~~~kL~DFG~a~~~  242 (373)
T 3c1x_A          211 K---------------------------------KFVHRDLAARNCMLDEK----------FTVKVADFGLARDM  242 (373)
T ss_dssp             T---------------------------------TCCCSCCCGGGEEECTT----------CCEEECCC------
T ss_pred             C---------------------------------CEecCccchheEEECCC----------CCEEEeeccccccc
Confidence            3                                 68999999999999744          37999999998743

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.65  E-value=9.9e-17  Score=123.59  Aligned_cols=106  Identities=26%  Similarity=0.455  Sum_probs=92.8

Q ss_pred             HHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..++.|+++++.+ +||||+++++++......++++||+++++|..++...+.+++.....++.+++.++.++|..    
T Consensus       103 ~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~----  178 (355)
T 1vzo_A          103 EHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL----  178 (355)
T ss_dssp             GGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            4456788888888 69999999999999999999999999999998887777889999999999999999998753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++||||||+||+++.+          ..++|+|||+++.+
T Consensus       179 -----------------------------~ivH~Dlkp~NIll~~~----------~~~kl~DfG~a~~~  209 (355)
T 1vzo_A          179 -----------------------------GIIYRDIKLENILLDSN----------GHVVLTDFGLSKEF  209 (355)
T ss_dssp             -----------------------------TCCCCCCCGGGEEECTT----------SCEEESCSSEEEEC
T ss_pred             -----------------------------CcccCCCCHHHEEECCC----------CcEEEeeCCCCeec
Confidence                                         68999999999999754          37999999998743

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.65  E-value=2.4e-16  Score=121.96  Aligned_cols=107  Identities=35%  Similarity=0.635  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+..|+.+++.+ +||||+++++++......|+++||++++++.+++.....+++.....++.+++.++.++|..   
T Consensus       143 ~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---  219 (365)
T 2y7j_A          143 REATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---  219 (365)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            45678899999999 79999999999999999999999999999988877667789999999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|+|+||+||+++.+          +.++++|||+++.+
T Consensus       220 ------------------------------gi~H~Dlkp~NIl~~~~----------~~ikl~DfG~~~~~  250 (365)
T 2y7j_A          220 ------------------------------NIVHRDLKPENILLDDN----------MQIRLSDFGFSCHL  250 (365)
T ss_dssp             ------------------------------TEECSCCSGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             ------------------------------CeecCCCCHHHEEECCC----------CCEEEEecCccccc
Confidence                                          68999999999999854          37899999998654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.65  E-value=1e-16  Score=127.24  Aligned_cols=106  Identities=28%  Similarity=0.455  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ...+.+|+++++.++||||+++++++.. ...|+++||+++|+|.+++...  ..++......++.+++.++.++|..  
T Consensus       223 ~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~--  299 (452)
T 1fmk_A          223 PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--  299 (452)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            4567899999999999999999998866 7789999999999999887643  3478888889999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++||||||+||+++.+          ..+||+|||+++..
T Consensus       300 -------------------------------~ivHrDlkp~Nill~~~----------~~~kl~DfG~a~~~  330 (452)
T 1fmk_A          300 -------------------------------NYVHRDLRAANILVGEN----------LVCKVADFGLARLI  330 (452)
T ss_dssp             -------------------------------TCCCSCCSGGGEEECGG----------GCEEECCCCTTC--
T ss_pred             -------------------------------CeeCCCCChhhEEECCC----------CCEEECCCccceec
Confidence                                           68999999999999754          47999999999754

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.65  E-value=1.9e-16  Score=123.63  Aligned_cols=112  Identities=32%  Similarity=0.529  Sum_probs=92.8

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCC--cEEEEEEEeCCCceeEEEeeecC---CCHHHHHHHHHHHHHHHHHhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQ--HVYLVMEFCNGGDLADYLVSKGT---LSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~--~~~lv~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ....+.+|+++++.++||||+++++++....  ..|+++||++++++..++.....   +++..+..++.+++.++.++|
T Consensus        50 ~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH  129 (396)
T 4eut_A           50 PVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR  129 (396)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence            3566778999999999999999999887655  78999999999999888765433   788999999999999999988


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|||+||+||++...      .+....+||+|||+++.+
T Consensus       130 ~~---------------------------------~ivH~Dlkp~NIll~~~------~~~~~~~kL~DFG~a~~~  166 (396)
T 4eut_A          130 EN---------------------------------GIVHRNIKPGNIMRVIG------EDGQSVYKLTDFGAAREL  166 (396)
T ss_dssp             HT---------------------------------TEECCCCCGGGEEEEEC------TTSCEEEEECCGGGCEEC
T ss_pred             HC---------------------------------CEEECCcCHHHEEEeec------CCCceeEEEecCCCceEc
Confidence            53                                 68999999999998421      124457899999999754

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.64  E-value=4e-16  Score=115.66  Aligned_cols=119  Identities=25%  Similarity=0.394  Sum_probs=93.4

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----cCCCHHHHHHHHHHHHHHHHHh
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----GTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      .....+.+|+..+..+ +||||+++++++.+.+..++++|++++++|.+++...    +.+++.....++.+++.++.++
T Consensus        52 ~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~l  131 (289)
T 1x8b_A           52 VDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYI  131 (289)
T ss_dssp             HHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence            3455677788888888 9999999999999999999999999999999887654    5578899999999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCC---------CCCCCCceEEEeee
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ---------YPQPQHIKLKIADF  152 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~---------~~~~~~~~~~l~df  152 (160)
                      |..                                 +++|+||||+||+++.++...         ...+....++++||
T Consensus       132 H~~---------------------------------~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df  178 (289)
T 1x8b_A          132 HSM---------------------------------SLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDL  178 (289)
T ss_dssp             HHT---------------------------------TEECSCCSGGGEEEC--------------------CCCEEECCC
T ss_pred             HhC---------------------------------CEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEccc
Confidence            863                                 689999999999998542000         00013346899999


Q ss_pred             eccccc
Q psy11428        153 GFARFL  158 (160)
Q Consensus       153 g~a~~~  158 (160)
                      |+++..
T Consensus       179 g~~~~~  184 (289)
T 1x8b_A          179 GHVTRI  184 (289)
T ss_dssp             TTCEET
T ss_pred             cccccc
Confidence            998754

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.64  E-value=1.6e-16  Score=120.47  Aligned_cols=108  Identities=21%  Similarity=0.317  Sum_probs=91.5

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec----CCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----TLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .+.+|+++++.++||||+++++++......++++|+++++++..++....    .+++.....+..+++.++.++|... 
T Consensus        73 ~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~-  151 (326)
T 3uim_A           73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHC-  151 (326)
T ss_dssp             HHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSS-
T ss_pred             HHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCC-
Confidence            57889999999999999999999999999999999999999988775432    3778888889999999999987520 


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                       .                            .+++|+||||+||+++.+          ..++|+|||+++..
T Consensus       152 -~----------------------------~~ivH~Dlkp~Nil~~~~----------~~~kl~Dfg~~~~~  184 (326)
T 3uim_A          152 -D----------------------------PKIIHRDVKAANILLDEE----------FEAVVGDFGLAKLM  184 (326)
T ss_dssp             -S----------------------------SCEECCCCSGGGEEECTT----------CCEEECCCSSCEEC
T ss_pred             -C----------------------------CCeEeCCCchhhEEECCC----------CCEEeccCcccccc
Confidence             0                            158999999999999844          37899999999754

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.64  E-value=2.5e-16  Score=117.50  Aligned_cols=112  Identities=30%  Similarity=0.518  Sum_probs=96.7

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|+++++.++||||+++++++......++++|+++++++..++...+.+++.....+..+++.++.++|..  
T Consensus        63 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~--  140 (287)
T 2wei_A           63 KDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH--  140 (287)
T ss_dssp             SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            345677889999999999999999999999999999999999999987776667789999999999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+||+++.++       ....++|+|||+++..
T Consensus       141 -------------------------------~i~H~dl~p~NIlv~~~~-------~~~~~kL~Dfg~~~~~  174 (287)
T 2wei_A          141 -------------------------------NIVHRDLKPENILLESKE-------KDCDIKIIDFGLSTCF  174 (287)
T ss_dssp             -------------------------------TCCCSCCCGGGEEESCSS-------TTCCEEECSTTGGGTB
T ss_pred             -------------------------------CeeccCCChhhEEEecCC-------CcccEEEeccCcceee
Confidence                                           689999999999997543       2347899999998754

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.64  E-value=1.6e-16  Score=117.01  Aligned_cols=106  Identities=25%  Similarity=0.436  Sum_probs=92.6

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+++++.++||||+++++++..++..++++|+++++++.+++... +.+++.....+..+++.++.++|..    
T Consensus        48 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~----  123 (267)
T 3t9t_A           48 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA----  123 (267)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            56788999999999999999999999999999999999999998877543 4578888888999999999998753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|+|+||+||+++.+          ..++++|||+++..
T Consensus       124 -----------------------------~i~H~dl~p~Nili~~~----------~~~kl~dfg~~~~~  154 (267)
T 3t9t_A          124 -----------------------------CVIHRDLAARNCLVGEN----------QVIKVSDFGMTRFV  154 (267)
T ss_dssp             -----------------------------TCCCSSCCGGGEEECGG----------GCEEECCTTGGGGB
T ss_pred             -----------------------------CcccCCCchheEEECCC----------CCEEEccccccccc
Confidence                                         68999999999999754          37999999998754

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.64  E-value=1.9e-16  Score=120.51  Aligned_cols=109  Identities=19%  Similarity=0.291  Sum_probs=91.6

Q ss_pred             HHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         11 LTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        11 ~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      .+..|+++++.+ +||||+++++.+......++++|++ +++|.+++.. .+.+++.....++.+++.++.++|..    
T Consensus        50 ~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~----  124 (330)
T 2izr_A           50 QLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK----  124 (330)
T ss_dssp             CHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            467899999999 9999999999999999999999999 8899887654 35688999999999999999998853    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++||||||+||+++.++.     .....++|+|||+++.+
T Consensus       125 -----------------------------~iiHrDlkp~Nill~~~~~-----~~~~~~kl~DFg~a~~~  160 (330)
T 2izr_A          125 -----------------------------NLIYRDVKPENFLIGRPGN-----KTQQVIHIIDFALAKEY  160 (330)
T ss_dssp             -----------------------------TEECCCCCGGGEEECCGGG-----TCTTSEEECCCTTCEES
T ss_pred             -----------------------------CeeccCCCHHHeeeccCCC-----CCCceEEEEEcccceee
Confidence                                         6899999999999985431     01123899999999754

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.64  E-value=1.1e-16  Score=119.65  Aligned_cols=105  Identities=37%  Similarity=0.551  Sum_probs=89.1

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|+++++.++||||+++++++...+..++++|++++ ++..++.. .+.+++.....++.+++.++.++|..   
T Consensus        44 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---  119 (288)
T 1ob3_A           44 PSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---  119 (288)
T ss_dssp             CHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             chhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            35567899999999999999999999999999999999975 66555443 35678888899999999999998853   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|||+||+||+++.+          +.+||+|||+++.
T Consensus       120 ------------------------------~i~H~dlkp~Nil~~~~----------~~~kl~Dfg~~~~  149 (288)
T 1ob3_A          120 ------------------------------RVLHRDLKPQNLLINRE----------GELKIADFGLARA  149 (288)
T ss_dssp             ------------------------------TCCCSCCCGGGEEECTT----------SCEEECCTTHHHH
T ss_pred             ------------------------------CeecCCCCHHHEEEcCC----------CCEEEeECccccc
Confidence                                          68999999999999754          3799999999864

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=3.7e-16  Score=116.62  Aligned_cols=110  Identities=29%  Similarity=0.464  Sum_probs=93.7

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      +......+.+|+++++.++||||+++++++ .....++++|+++++++..++... +.+++.....+..+++.++.++|.
T Consensus        50 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~  128 (287)
T 1u59_A           50 EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE  128 (287)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHH
Confidence            345667788999999999999999999998 456799999999999998876533 457888999999999999999875


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|+||+||+++.+          ..++|+|||+++.+
T Consensus       129 ~---------------------------------~i~H~dlkp~Nili~~~----------~~~kl~Dfg~~~~~  160 (287)
T 1u59_A          129 K---------------------------------NFVHRDLAARNVLLVNR----------HYAKISDFGLSKAL  160 (287)
T ss_dssp             T---------------------------------TEECCCCSGGGEEEEET----------TEEEECCCTTCEEC
T ss_pred             C---------------------------------CEeeCCCchheEEEcCC----------CCEEECcccceeee
Confidence            3                                 68999999999999854          37999999998754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.64  E-value=3.1e-16  Score=120.09  Aligned_cols=109  Identities=29%  Similarity=0.520  Sum_probs=94.5

Q ss_pred             chhHHHHHHHHHHHHhhcCC--cceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          5 SKSSIVLTRHILKELTELHH--ENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h--~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      +......+++|+++++.++|  |||+++++.+......|++|| +.++++..++...+.+++.....++.+++.++.++|
T Consensus        47 ~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH  125 (343)
T 3dbq_A           47 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH  125 (343)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            34556778899999999987  999999999999999999999 667898888877778899999999999999999988


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++||||||+||+++.           ..++|+|||+++.+
T Consensus       126 ~~---------------------------------~iiHrDikp~NIll~~-----------~~~kl~DFG~a~~~  157 (343)
T 3dbq_A          126 QH---------------------------------GIVHSDLKPANFLIVD-----------GMLKLIDFGIANQM  157 (343)
T ss_dssp             HT---------------------------------TCCCCCCCGGGEEEET-----------TEEEECCCSSSCCC
T ss_pred             hC---------------------------------CeecCCCCcceEEEEC-----------CcEEEeeccccccc
Confidence            53                                 6899999999999962           26899999999754

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.64  E-value=3.1e-16  Score=118.28  Aligned_cols=111  Identities=23%  Similarity=0.398  Sum_probs=89.8

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCC-----cEEEEEEEeCCCceeEEEe------eecCCCHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQ-----HVYLVMEFCNGGDLADYLV------SKGTLSEDTIRIFLKQ   73 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~-----~~~lv~e~~~~g~l~~~l~------~~~~~~~~~~~~~~~~   73 (160)
                      +......+.+|+++++.++||||+++++++....     ..++++|+++++++..++.      ....+++.....++.+
T Consensus        76 ~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~q  155 (313)
T 3brb_A           76 SQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVD  155 (313)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHH
Confidence            3455677889999999999999999999887654     3599999999999988763      2345788899999999


Q ss_pred             HHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeee
Q psy11428         74 IVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFG  153 (160)
Q Consensus        74 ~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg  153 (160)
                      ++.++.++|..                                 +++|+|+||+||+++.+          ..++|+|||
T Consensus       156 i~~aL~~LH~~---------------------------------~ivH~dikp~NIli~~~----------~~~kl~Dfg  192 (313)
T 3brb_A          156 IALGMEYLSNR---------------------------------NFLHRDLAARNCMLRDD----------MTVCVADFG  192 (313)
T ss_dssp             HHHHHHHHHTT---------------------------------TCCCCCCSGGGEEECTT----------SCEEECSCS
T ss_pred             HHHHHHHHHhC---------------------------------CcccCCCCcceEEEcCC----------CcEEEeecC
Confidence            99999988753                                 68999999999999744          379999999


Q ss_pred             ccccc
Q psy11428        154 FARFL  158 (160)
Q Consensus       154 ~a~~~  158 (160)
                      +++.+
T Consensus       193 ~~~~~  197 (313)
T 3brb_A          193 LSKKI  197 (313)
T ss_dssp             CC---
T ss_pred             cceec
Confidence            98653

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.64  E-value=1.3e-16  Score=129.24  Aligned_cols=106  Identities=28%  Similarity=0.455  Sum_probs=91.4

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ...+.+|+++++.++||||+++++++.. ...|+||||+.+|+|.+++...  ..++...+..++.+++.++.++|..  
T Consensus       306 ~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~--  382 (535)
T 2h8h_A          306 PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM--  382 (535)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            3567899999999999999999998866 7789999999999999887643  3478888889999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++||||||+||+++.+          ..+||+|||+++.+
T Consensus       383 -------------------------------~ivHrDlkp~NIll~~~----------~~~kl~DFG~a~~~  413 (535)
T 2h8h_A          383 -------------------------------NYVHRDLRAANILVGEN----------LVCKVADFGLARLI  413 (535)
T ss_dssp             -------------------------------TCCCSCCSGGGEEECGG----------GCEEECCTTSTTTC
T ss_pred             -------------------------------CeeCCCCCHhhEEEcCC----------CcEEEcccccceec
Confidence                                           68999999999999754          47999999999765

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.64  E-value=2.4e-16  Score=123.45  Aligned_cols=108  Identities=27%  Similarity=0.463  Sum_probs=88.1

Q ss_pred             HHHHHHHHH-hhcCCcceEEEeeeeec----CCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhh
Q psy11428         11 LTRHILKEL-TELHHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus        11 ~~~~~~~~l-~~l~h~~iv~l~~~~~~----~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ..++|++++ +..+||||+++++++..    ...+|+||||+++|+|.+++..++  .+++.....++.+++.++.++|.
T Consensus       100 ~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~  179 (400)
T 1nxk_A          100 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS  179 (400)
T ss_dssp             HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            356677776 44589999999998765    567899999999999988876543  48899999999999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++||||||+||+++.+.       .+..+||+|||+++..
T Consensus       180 ~---------------------------------~ivHrDlkp~Nill~~~~-------~~~~~kl~DFG~a~~~  214 (400)
T 1nxk_A          180 I---------------------------------NIAHRDVKPENLLYTSKR-------PNAILKLTDFGFAKET  214 (400)
T ss_dssp             T---------------------------------TEECCCCCGGGEEESSSS-------TTCCEEECCCTTCEEC
T ss_pred             C---------------------------------CccccCcCcceEEEecCC-------CCccEEEEeccccccc
Confidence            3                                 689999999999998532       2457999999998754

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.63  E-value=6.1e-16  Score=128.43  Aligned_cols=108  Identities=26%  Similarity=0.403  Sum_probs=89.6

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCc-----EEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQH-----VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~-----~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      ......+..|.++++.++||||+++++++...+.     .|+||||++|+++..++..  .+++.....+..+++.++.+
T Consensus       120 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~  197 (681)
T 2pzi_A          120 AEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSY  197 (681)
T ss_dssp             HHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHH
Confidence            3455677899999999999999999998887665     7999999999999887643  68888999999999999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                      +|..                                 +++||||||+||+++.+           .+||+|||+++...
T Consensus       198 lH~~---------------------------------giiHrDlkp~NIll~~~-----------~~kl~DFG~a~~~~  232 (681)
T 2pzi_A          198 LHSI---------------------------------GLVYNDLKPENIMLTEE-----------QLKLIDLGAVSRIN  232 (681)
T ss_dssp             HHHT---------------------------------TEECCCCSGGGEEECSS-----------CEEECCCTTCEETT
T ss_pred             HHHC---------------------------------CCeecccChHHeEEeCC-----------cEEEEecccchhcc
Confidence            8853                                 68999999999999732           68999999987543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.63  E-value=2.6e-16  Score=119.50  Aligned_cols=113  Identities=23%  Similarity=0.329  Sum_probs=94.9

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-------cCCCHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-------GTLSEDTIRIFLKQIVQA   77 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-------~~~~~~~~~~~~~~~~~~   77 (160)
                      +......+.+|+.+++.++||||+++++++......|+++|++++++|..++...       ..++......++.+++.+
T Consensus        73 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~a  152 (327)
T 2yfx_A           73 SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG  152 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHH
Confidence            3445667888999999999999999999999999999999999999998887643       236778888899999999


Q ss_pred             HHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         78 LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        78 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +.++|..                                 +++|+|+||+||+++.++       ....++|+|||+++.
T Consensus       153 l~~LH~~---------------------------------~i~H~dlkp~NIli~~~~-------~~~~~kl~Dfg~~~~  192 (327)
T 2yfx_A          153 CQYLEEN---------------------------------HFIHRDIAARNCLLTCPG-------PGRVAKIGDFGMARD  192 (327)
T ss_dssp             HHHHHHT---------------------------------TCCCSCCCGGGEEESCSS-------TTCCEEECCCHHHHH
T ss_pred             HHHHhhC---------------------------------CeecCcCCHhHEEEecCC-------CcceEEECccccccc
Confidence            9998753                                 689999999999998543       234689999998863

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.63  E-value=5e-16  Score=115.45  Aligned_cols=109  Identities=26%  Similarity=0.424  Sum_probs=92.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+.+|+++++.++||||+++++++.. +..|+++|+++++++..++... ..++......+..+++.++.++|..
T Consensus        54 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  132 (281)
T 3cc6_A           54 LDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI  132 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3456778899999999999999999998865 4568999999999998887554 3478888888999999999998753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|+||+||+++.++          .++|+|||+++..
T Consensus       133 ---------------------------------~i~H~dlkp~Nil~~~~~----------~~kl~Dfg~~~~~  163 (281)
T 3cc6_A          133 ---------------------------------NCVHRDIAVRNILVASPE----------CVKLGDFGLSRYI  163 (281)
T ss_dssp             ---------------------------------TCCCCCCSGGGEEEEETT----------EEEECCCCGGGCC
T ss_pred             ---------------------------------CcccCCCccceEEECCCC----------cEEeCccCCCccc
Confidence                                             689999999999998543          7999999998754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.63  E-value=2.6e-16  Score=118.50  Aligned_cols=110  Identities=35%  Similarity=0.520  Sum_probs=91.5

Q ss_pred             hhHHHHHHHHHHHHhhc-CCcceEEEeeeeecC-CcEEEEEEEeCCCceeEEEeeecC----------------CCHHHH
Q psy11428          6 KSSIVLTRHILKELTEL-HHENVVELLHCKESD-QHVYLVMEFCNGGDLADYLVSKGT----------------LSEDTI   67 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~-~~~~lv~e~~~~g~l~~~l~~~~~----------------~~~~~~   67 (160)
                      .+....+.+|+++++.+ +||||+++++++... ...++++|++++++|..++.....                ++....
T Consensus        71 ~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  150 (316)
T 2xir_A           71 HSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHL  150 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHH
T ss_pred             cHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHH
Confidence            34556788999999999 799999999987765 459999999999999887754432                678888


Q ss_pred             HHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceE
Q psy11428         68 RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKL  147 (160)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~  147 (160)
                      ..+..+++.++.++|..                                 +++|+|+||+||+++.+          ..+
T Consensus       151 ~~~~~qi~~al~~lH~~---------------------------------~i~H~dikp~Nil~~~~----------~~~  187 (316)
T 2xir_A          151 ICYSFQVAKGMEFLASR---------------------------------KCIHRDLAARNILLSEK----------NVV  187 (316)
T ss_dssp             HHHHHHHHHHHHHHHHT---------------------------------TCCCSCCSGGGEEECGG----------GCE
T ss_pred             HHHHHHHHHHHHHHHhC---------------------------------CcccccCccceEEECCC----------CCE
Confidence            88999999999998753                                 68999999999999754          379


Q ss_pred             EEeeeeccccc
Q psy11428        148 KIADFGFARFL  158 (160)
Q Consensus       148 ~l~dfg~a~~~  158 (160)
                      +|+|||+++.+
T Consensus       188 kl~Dfg~~~~~  198 (316)
T 2xir_A          188 KICDFGLARDI  198 (316)
T ss_dssp             EECCCGGGSCT
T ss_pred             EECCCcccccc
Confidence            99999998754

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.63  E-value=5.1e-16  Score=115.62  Aligned_cols=109  Identities=27%  Similarity=0.400  Sum_probs=93.2

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+.+|+++++.++||||+++++++..+. .++++|+++++++.+++... +.+++.....+..+++.++.++|..
T Consensus        62 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  140 (291)
T 1u46_A           62 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK  140 (291)
T ss_dssp             CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC
Confidence            345677889999999999999999999987654 89999999999998877553 5578888999999999999998753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|+||+||+++.++          .++|+|||+++.+
T Consensus       141 ---------------------------------~i~H~dikp~Nili~~~~----------~~kl~Dfg~~~~~  171 (291)
T 1u46_A          141 ---------------------------------RFIHRDLAARNLLLATRD----------LVKIGDFGLMRAL  171 (291)
T ss_dssp             ---------------------------------TEECSCCCGGGEEEEETT----------EEEECCCTTCEEC
T ss_pred             ---------------------------------CcccCCCchheEEEcCCC----------CEEEccccccccc
Confidence                                             689999999999998543          7999999998754

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.63  E-value=4e-16  Score=118.54  Aligned_cols=111  Identities=28%  Similarity=0.467  Sum_probs=92.9

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCC--cEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQ--HVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~--~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      +......+.+|+++++.++||||+++++++...+  ..++++|++++++|.+++... ..+++.....+..+++.++.++
T Consensus        82 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L  161 (326)
T 2w1i_A           82 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL  161 (326)
T ss_dssp             CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            3455677889999999999999999999876543  789999999999998887654 4578888888999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                 +++|+|+||+||+++.++          .++|+|||+++..
T Consensus       162 H~~---------------------------------~ivH~dikp~NIli~~~~----------~~kL~Dfg~~~~~  195 (326)
T 2w1i_A          162 GTK---------------------------------RYIHRDLATRNILVENEN----------RVKIGDFGLTKVL  195 (326)
T ss_dssp             HHT---------------------------------TEECSCCCGGGEEEEETT----------EEEECCCTTCEEC
T ss_pred             HhC---------------------------------CEeccCCCcceEEEcCCC----------cEEEecCcchhhc
Confidence            753                                 689999999999998543          7999999998754

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.63  E-value=5.6e-16  Score=116.68  Aligned_cols=110  Identities=26%  Similarity=0.509  Sum_probs=90.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee----ecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      ......+.+|+++++.++||||+++++++...+..++++|+++++++..++..    ...+++.....++.+++.++.++
T Consensus        73 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~L  152 (310)
T 2wqm_A           73 AKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM  152 (310)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHH
Confidence            44566788999999999999999999999999999999999999999877643    34578888889999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                 +++|+|++|+||+++.+          +.++|+|||+++..
T Consensus       153 H~~---------------------------------~i~H~dl~p~NIl~~~~----------~~~kl~Dfg~~~~~  186 (310)
T 2wqm_A          153 HSR---------------------------------RVMHRDIKPANVFITAT----------GVVKLGDLGLGRFF  186 (310)
T ss_dssp             HHT---------------------------------TCCCCCCCGGGEEECTT----------SCEEECCC------
T ss_pred             hhC---------------------------------CeeCCCCcHHHEEEcCC----------CCEEEEeccceeee
Confidence            753                                 68999999999999744          37899999998654

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.63  E-value=3.7e-16  Score=119.72  Aligned_cols=105  Identities=21%  Similarity=0.238  Sum_probs=90.4

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeeec----CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         12 TRHILKELTELHHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~~----~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      +..|+..++.++||||+++++++..    ....|+++|++ +++|.+++...+.+++.....++.+++.++.++|..   
T Consensus        95 ~~~e~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---  170 (345)
T 2v62_A           95 CIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---  170 (345)
T ss_dssp             HHHHHHHHHTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHhhccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            4467778888999999999998877    78899999999 999999887777889999999999999999998853   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++||||||+||+++.++        ...++|+|||+++.+
T Consensus       171 ------------------------------~ivH~Dlkp~NIll~~~~--------~~~~kL~Dfg~a~~~  203 (345)
T 2v62_A          171 ------------------------------EYVHGDIKAANLLLGYKN--------PDQVYLADYGLSYRY  203 (345)
T ss_dssp             ------------------------------TEECSCCSGGGEEEESSS--------TTSEEECCCTTCEES
T ss_pred             ------------------------------CeeCCCcCHHHEEEccCC--------CCcEEEEeCCCceec
Confidence                                          689999999999998542        237899999999654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.63  E-value=3.1e-16  Score=117.92  Aligned_cols=109  Identities=34%  Similarity=0.605  Sum_probs=93.5

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ..+.+|+++++.++||||+++++++......|+++|+++++++.+++...+.+++.....+..+++.++.++|..     
T Consensus        51 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-----  125 (304)
T 2jam_A           51 SSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN-----  125 (304)
T ss_dssp             -HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            456789999999999999999999999999999999999999988776677788999999999999999998753     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++|+|+||+||++...       +.+..++++|||+++..
T Consensus       126 ----------------------------~i~H~dikp~NIl~~~~-------~~~~~~kl~Dfg~~~~~  159 (304)
T 2jam_A          126 ----------------------------GIVHRDLKPENLLYLTP-------EENSKIMITDFGLSKME  159 (304)
T ss_dssp             ----------------------------TCCCCSCCGGGCEESSS-------STTCCEEBCSCSTTCCC
T ss_pred             ----------------------------CccccCCCHHHEEEecC-------CCCCCEEEccCCcceec
Confidence                                        68999999999999422       13457899999998643

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.63  E-value=4.2e-16  Score=116.50  Aligned_cols=109  Identities=23%  Similarity=0.413  Sum_probs=87.4

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      +......+.+|+++++.++||||+++++.. .....++++|+++++++..++.. ...+++.....+..+++.++.++|.
T Consensus        60 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~  138 (289)
T 3og7_A           60 TPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA  138 (289)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            455667889999999999999999999954 56678999999999998777643 3457888888999999999999875


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      .                                 +++|+|+||+||+++.+          ..++|+|||+++.
T Consensus       139 ~---------------------------------~i~H~Dlkp~Nil~~~~----------~~~kl~Dfg~~~~  169 (289)
T 3og7_A          139 K---------------------------------SIIHRDLKSNNIFLHED----------NTVKIGDFGLATE  169 (289)
T ss_dssp             T---------------------------------TCCCSCCCGGGEEEETT----------TEEEECCCC----
T ss_pred             C---------------------------------CcccccCccceEEECCC----------CCEEEccceeccc
Confidence            3                                 68999999999999854          3899999999864

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.63  E-value=3.7e-16  Score=115.38  Aligned_cols=118  Identities=31%  Similarity=0.437  Sum_probs=90.2

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+++|+++++.++||||+++++++..++..++++|+++++++..++. .+.+++.....+..+++.++.++|...  
T Consensus        49 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH~~~--  125 (271)
T 3dtc_A           49 TIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLHDEA--  125 (271)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHHHSS--
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC--
Confidence            35678899999999999999999999999999999999999999877663 456888899999999999999987531  


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  ..+++|+|+||+||+++.....  .......++++|||+++..
T Consensus       126 ----------------------------~~~i~H~dikp~Nil~~~~~~~--~~~~~~~~kl~Dfg~~~~~  166 (271)
T 3dtc_A          126 ----------------------------IVPIIHRDLKSSNILILQKVEN--GDLSNKILKITDFGLAREW  166 (271)
T ss_dssp             ----------------------------SSCCCCSCCSGGGEEESSCCSS--SCCSSCCEEECCCCC----
T ss_pred             ----------------------------CCceeecCCchHHEEEeccccc--ccccCcceEEccCCccccc
Confidence                                        0137899999999999853210  0112457899999998643

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.63  E-value=2.5e-16  Score=116.79  Aligned_cols=116  Identities=32%  Similarity=0.536  Sum_probs=91.8

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeee--cCCcEEEEEEEeCCCceeEEEeeec----CCCHHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKE--SDQHVYLVMEFCNGGDLADYLVSKG----TLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~--~~~~~~lv~e~~~~g~l~~~l~~~~----~~~~~~~~~~~~~~~~~~   78 (160)
                      +......+.+|+++++.++||||+++++.+.  .+...|+++||+++++|.+++....    .+++.....+..+++.++
T Consensus        45 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l  124 (279)
T 2w5a_A           45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL  124 (279)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHH
Confidence            3455677889999999999999999999774  4678999999999999988775432    378888999999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .++|.....                            -.+++|+|++|+||+++.+          ..++|+|||+++..
T Consensus       125 ~~lH~~~~~----------------------------~~~ivH~dl~p~NIl~~~~----------~~~kl~dfg~~~~~  166 (279)
T 2w5a_A          125 KECHRRSDG----------------------------GHTVLHRDLKPANVFLDGK----------QNVKLGDFGLARIL  166 (279)
T ss_dssp             HHHHHHC----------------------------------CCCCCSGGGEEECSS----------SCEEECCCCHHHHC
T ss_pred             HHHhcccCC----------------------------CCeeEEeccchhhEEEcCC----------CCEEEecCchheee
Confidence            998853100                            0138999999999999744          37899999998654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.63  E-value=4.5e-16  Score=115.51  Aligned_cols=107  Identities=28%  Similarity=0.502  Sum_probs=90.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....+.+|+++++.++||||+++++++. .+..++++|++++++|.+++....  .+++.....+..+++.++.++|.. 
T Consensus        51 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-  128 (279)
T 1qpc_A           51 SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER-  128 (279)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3456788999999999999999999876 456899999999999988876543  578888889999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       129 --------------------------------~i~H~dikp~Nil~~~~----------~~~kl~Dfg~~~~~  159 (279)
T 1qpc_A          129 --------------------------------NYIHRDLRAANILVSDT----------LSCKIADFGLARLI  159 (279)
T ss_dssp             --------------------------------TEECSCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             --------------------------------CeeccCCCHhhEEEcCC----------CCEEECCCcccccc
Confidence                                            68999999999999743          37899999998754

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.63  E-value=5.4e-16  Score=128.45  Aligned_cols=109  Identities=27%  Similarity=0.514  Sum_probs=92.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+.+|+.+++.++||||+++++++. .+..|++|||+++|+|..++...+ .+++.....+..+++.++.++|..
T Consensus       432 ~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~  510 (656)
T 2j0j_A          432 DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK  510 (656)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            344567889999999999999999999884 467899999999999988776443 578888888999999999998753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++||||||+||+++.++          .++|+|||+++..
T Consensus       511 ---------------------------------givHrDikp~NILl~~~~----------~vkL~DFG~a~~~  541 (656)
T 2j0j_A          511 ---------------------------------RFVHRDIAARNVLVSSND----------CVKLGDFGLSRYM  541 (656)
T ss_dssp             ---------------------------------TCCCSCCSGGGEEEEETT----------EEEECCCCCCCSC
T ss_pred             ---------------------------------CccccccchHhEEEeCCC----------CEEEEecCCCeec
Confidence                                             689999999999998543          8999999999754

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.62  E-value=5.3e-16  Score=121.07  Aligned_cols=109  Identities=29%  Similarity=0.516  Sum_probs=93.2

Q ss_pred             chhHHHHHHHHHHHHhhcC--CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          5 SKSSIVLTRHILKELTELH--HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~--h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      +......+++|+++++.++  ||||+++++++.....+|++|| +.+++|..++...+.+++.....++.+++.++.++|
T Consensus        94 ~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH  172 (390)
T 2zmd_A           94 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH  172 (390)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3455677899999999996  5999999999999999999999 678888888777777888888889999999999887


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++||||||+||+++.           ..+||+|||+++.+
T Consensus       173 ~~---------------------------------~ivHrDlkp~NIll~~-----------~~~kl~DFG~a~~~  204 (390)
T 2zmd_A          173 QH---------------------------------GIVHSDLKPANFLIVD-----------GMLKLIDFGIANQM  204 (390)
T ss_dssp             TT---------------------------------TCCCCCCCGGGEEESS-----------SCEEECCCSSSCCC
T ss_pred             HC---------------------------------CeeecCCCHHHEEEEC-----------CeEEEEecCccccc
Confidence            53                                 6899999999999952           26899999999754

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.62  E-value=6.3e-16  Score=120.19  Aligned_cols=108  Identities=33%  Similarity=0.539  Sum_probs=88.6

Q ss_pred             hhHHHHHHHHHHHHhhcC-CcceEEEeeeeecCC--cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          6 KSSIVLTRHILKELTELH-HENVVELLHCKESDQ--HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~--~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      .........|+.+++.+. ||||+++++++...+  .+|+|+||++ +++...+. .+.+++.....++.+++.++.++|
T Consensus        49 ~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH  126 (388)
T 3oz6_A           49 STDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYME-TDLHAVIR-ANILEPVHKQYVVYQLIKVIKYLH  126 (388)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECCS-EEHHHHHH-HTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEecccC-cCHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence            344566778999999997 999999999987544  7899999997 46665543 356788888889999999999988


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++||||||+||+++.+          +.+||+|||+++.+
T Consensus       127 ~~---------------------------------~ivHrDlkp~NIll~~~----------~~~kl~DFG~a~~~  159 (388)
T 3oz6_A          127 SG---------------------------------GLLHRDMKPSNILLNAE----------CHVKVADFGLSRSF  159 (388)
T ss_dssp             HT---------------------------------TEECCCCCGGGEEECTT----------CCEEECCCTTCEES
T ss_pred             hC---------------------------------CEEeCCCCHHHeEEcCC----------CCEEecCCcccccc
Confidence            63                                 68999999999999854          37999999999754

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.62  E-value=3.5e-16  Score=121.10  Aligned_cols=108  Identities=36%  Similarity=0.575  Sum_probs=90.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCC------cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQ------HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~------~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ......+.+|+++++.++||||+++++++....      ..|+++|++ ++++..++.. +.+++.....++.+++.++.
T Consensus        65 ~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~  142 (367)
T 1cm8_A           65 ELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKH-EKLGEDRIQFLVYQMLKGLR  142 (367)
T ss_dssp             HHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHHHHH-CCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Confidence            344567789999999999999999999887653      469999999 7787766543 56888899999999999999


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++|||+||+||+++.+          +.+||+|||+++..
T Consensus       143 ~LH~~---------------------------------~ivH~Dlkp~NIll~~~----------~~~kl~Dfg~a~~~  178 (367)
T 1cm8_A          143 YIHAA---------------------------------GIIHRDLKPGNLAVNED----------CELKILDFGLARQA  178 (367)
T ss_dssp             HHHHT---------------------------------TEECCCCCGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             HHHHC---------------------------------CccccCcCHHHEEEcCC----------CCEEEEeeeccccc
Confidence            98853                                 68999999999999854          37999999999754

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.62  E-value=3.1e-16  Score=119.47  Aligned_cols=109  Identities=25%  Similarity=0.373  Sum_probs=90.3

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+.+|+.+++.++||||+++++++..+. .+++++++.++++..++.. .+.+++.....+..+++.++.++|..
T Consensus        58 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~  136 (327)
T 3lzb_A           58 PKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR  136 (327)
T ss_dssp             CCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            345667888999999999999999999987654 8899999999999887765 34578888999999999999998853


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++||||||+||+++.++          .++|+|||+++.+
T Consensus       137 ---------------------------------~ivH~Dikp~NIl~~~~~----------~~kL~DfG~a~~~  167 (327)
T 3lzb_A          137 ---------------------------------RLVHRDLAARNVLVKTPQ----------HVKITDFGLAKLL  167 (327)
T ss_dssp             ---------------------------------TCCCSCCCGGGEEEEETT----------EEEECCTTC----
T ss_pred             ---------------------------------CCcCCCCCHHHEEEcCCC----------CEEEccCcceeEc
Confidence                                             689999999999998543          7999999999754

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.62  E-value=1.3e-15  Score=118.12  Aligned_cols=108  Identities=35%  Similarity=0.563  Sum_probs=82.0

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecC------CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESD------QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~------~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ......+.+|+++++.++||||+++++++...      ...|++++++ +++|..++.. +.+++.....++.+++.++.
T Consensus        69 ~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~  146 (367)
T 2fst_X           69 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLK  146 (367)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC-CEECC------CCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEeccc-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Confidence            34556777899999999999999999988654      5689999998 6788887754 56889999999999999999


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++|||+||+||+++.+          +.+||+|||+++..
T Consensus       147 ~LH~~---------------------------------givH~Dlkp~NIll~~~----------~~~kL~DFG~a~~~  182 (367)
T 2fst_X          147 YIHSA---------------------------------DIIHRDLKPSNLAVNED----------CELKILDFGLARHT  182 (367)
T ss_dssp             HHHHT---------------------------------TCCCCCCCGGGEEECTT----------CCEEECC-------
T ss_pred             HHHHC---------------------------------CeeeCCCCHhhEEECCC----------CCEEEeeccccccc
Confidence            98853                                 68999999999999854          37999999998754

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.62  E-value=6.3e-16  Score=115.41  Aligned_cols=111  Identities=30%  Similarity=0.500  Sum_probs=91.7

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeec-------------CCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKES-------------DQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIF   70 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~-------------~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~   70 (160)
                      +......+.+|+++++.++||||+++++.+..             ....|+++|++++++|.+++... ...++.....+
T Consensus        42 ~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i  121 (303)
T 1zy4_A           42 TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL  121 (303)
T ss_dssp             EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHH
Confidence            34556778899999999999999999987754             46789999999999998887543 34567788888


Q ss_pred             HHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEe
Q psy11428         71 LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIA  150 (160)
Q Consensus        71 ~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~  150 (160)
                      ..+++.++.++|..                                 +++|+|+||+||+++.+          +.++|+
T Consensus       122 ~~qi~~~l~~LH~~---------------------------------~i~H~dlkp~Nil~~~~----------~~~kl~  158 (303)
T 1zy4_A          122 FRQILEALSYIHSQ---------------------------------GIIHRDLKPMNIFIDES----------RNVKIG  158 (303)
T ss_dssp             HHHHHHHHHHHHHT---------------------------------TCCCSCCCGGGEEECTT----------SCEEEC
T ss_pred             HHHHHHHHHHHHhC---------------------------------CeecccCCHHhEEEcCC----------CCEEEe
Confidence            99999999998753                                 68999999999999754          378999


Q ss_pred             eeeccccc
Q psy11428        151 DFGFARFL  158 (160)
Q Consensus       151 dfg~a~~~  158 (160)
                      |||+++..
T Consensus       159 dfg~~~~~  166 (303)
T 1zy4_A          159 DFGLAKNV  166 (303)
T ss_dssp             CCCCCSCT
T ss_pred             eCcchhhc
Confidence            99998653

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.62  E-value=3.4e-16  Score=117.14  Aligned_cols=115  Identities=24%  Similarity=0.329  Sum_probs=86.4

Q ss_pred             HHHHHHHHHHHHhh--cCCcceEEEeeeeec----CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          8 SIVLTRHILKELTE--LHHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         8 ~~~~~~~~~~~l~~--l~h~~iv~l~~~~~~----~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      .......|.+++..  ++||||+++++.+..    ....|+++||+++|+|.+++. ...+++.....+..+++.++.++
T Consensus        43 ~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~-~~~~~~~~~~~i~~~i~~~l~~l  121 (301)
T 3q4u_A           43 DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ-LTTLDTVSCLRIVLSIASGLAHL  121 (301)
T ss_dssp             GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHT-TCCBCHHHHHHHHHHHHHHHHHH
T ss_pred             cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHh-hcccCHHHHHHHHHHHHHHHHHH
Confidence            33444556666655  799999999987543    356899999999999998874 35688888899999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |.....                         ...-.+++|||+||+||+++.+          ..+||+|||+++..
T Consensus       122 H~~~~~-------------------------~~~~~~ivH~Dlkp~Nill~~~----------~~~kl~Dfg~a~~~  163 (301)
T 3q4u_A          122 HIEIFG-------------------------TQGKPAIAHRDLKSKNILVKKN----------GQCCIADLGLAVMH  163 (301)
T ss_dssp             HSCBCS-------------------------TTCBCEEECSCCCGGGEEECTT----------SCEEECCCTTCEEE
T ss_pred             HHhhhh-------------------------ccCCCCeecCCCChHhEEEcCC----------CCEEEeeCCCeeec
Confidence            731100                         0000268999999999999854          37999999998643

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.62  E-value=7.3e-16  Score=115.73  Aligned_cols=109  Identities=29%  Similarity=0.492  Sum_probs=94.5

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+.+|+.+++.++||||+++++++......|+++|+++++++..++. .+.+++.....+..+++.++.++|.. 
T Consensus        61 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~-  138 (303)
T 3a7i_A           61 EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSE-  138 (303)
T ss_dssp             STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            3456778899999999999999999999999999999999999999887764 35688889999999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|++|+||+++.+          +.++|+|||+++.+
T Consensus       139 --------------------------------~i~H~dl~p~Nil~~~~----------~~~kl~Dfg~~~~~  169 (303)
T 3a7i_A          139 --------------------------------KKIHRDIKAANVLLSEH----------GEVKLADFGVAGQL  169 (303)
T ss_dssp             --------------------------------TEECCCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             --------------------------------CCccCCCChheEEECCC----------CCEEEeecccceec
Confidence                                            68999999999999744          37899999998654

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.61  E-value=4.5e-16  Score=115.43  Aligned_cols=105  Identities=30%  Similarity=0.573  Sum_probs=88.6

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeec----------------CCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHH
Q psy11428         11 LTRHILKELTELHHENVVELLHCKES----------------DQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLK   72 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~----------------~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~   72 (160)
                      .+.+|+++++.++||||+++++++..                ....++++|++++++|.+++...  ..+++.....+..
T Consensus        50 ~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~  129 (284)
T 2a19_B           50 KAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFE  129 (284)
T ss_dssp             GGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHH
Confidence            45679999999999999999998754                45589999999999999887543  4578888889999


Q ss_pred             HHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeee
Q psy11428         73 QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADF  152 (160)
Q Consensus        73 ~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~df  152 (160)
                      +++.++.++|..                                 +++|+|+||+||+++.++          .++|+||
T Consensus       130 qi~~~l~~lH~~---------------------------------~i~H~dlkp~Nil~~~~~----------~~kl~Df  166 (284)
T 2a19_B          130 QITKGVDYIHSK---------------------------------KLINRDLKPSNIFLVDTK----------QVKIGDF  166 (284)
T ss_dssp             HHHHHHHHHHHT---------------------------------TEECSCCSGGGEEEEETT----------EEEECCC
T ss_pred             HHHHHHHHHHhC---------------------------------CeeeccCCHHHEEEcCCC----------CEEECcc
Confidence            999999998753                                 689999999999998543          7999999


Q ss_pred             eccccc
Q psy11428        153 GFARFL  158 (160)
Q Consensus       153 g~a~~~  158 (160)
                      |+++.+
T Consensus       167 g~~~~~  172 (284)
T 2a19_B          167 GLVTSL  172 (284)
T ss_dssp             TTCEES
T ss_pred             hhheec
Confidence            998654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.61  E-value=4.1e-16  Score=116.85  Aligned_cols=108  Identities=29%  Similarity=0.535  Sum_probs=91.5

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+.+|+++++.++||||+++++++...+..++++|+++++++..++.. .+.+++.....+..+++.++.++|..
T Consensus        57 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  136 (302)
T 2j7t_A           57 EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK  136 (302)
T ss_dssp             -CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            34456788899999999999999999999999999999999999998776543 35588889999999999999998753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                       +++|+|+||+||+++.+          +.++|+|||+++
T Consensus       137 ---------------------------------~i~H~dlkp~Nil~~~~----------~~~kl~Dfg~~~  165 (302)
T 2j7t_A          137 ---------------------------------RIIHRDLKAGNVLMTLE----------GDIRLADFGVSA  165 (302)
T ss_dssp             ---------------------------------TCCCCCCSGGGEEECTT----------SCEEECCCHHHH
T ss_pred             ---------------------------------CcccCCCCHHHEEECCC----------CCEEEEECCCCc
Confidence                                             68999999999999744          378999999864

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.61  E-value=1.8e-16  Score=118.58  Aligned_cols=108  Identities=31%  Similarity=0.536  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee--------ecCCCHHHHHHHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--------KGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~--------~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ....+.+|+++++.++||||+++++++...+..++++|+++++++.+++..        .+.+++.....+..+++.++.
T Consensus        56 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  135 (303)
T 2vwi_A           56 SMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE  135 (303)
T ss_dssp             ----------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHH
Confidence            345667889999999999999999999999999999999999999887652        345788899999999999999


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++|+|++|+||+++.+          +.++|+|||+++.+
T Consensus       136 ~lH~~---------------------------------~i~H~dl~p~Nil~~~~----------~~~kl~dfg~~~~~  171 (303)
T 2vwi_A          136 YLHKN---------------------------------GQIHRDVKAGNILLGED----------GSVQIADFGVSAFL  171 (303)
T ss_dssp             HHHHT---------------------------------TCCCCCCSGGGEEECTT----------CCEEECCCHHHHHC
T ss_pred             HHHhC---------------------------------CCCCCCCChhhEEEcCC----------CCEEEEeccchhee
Confidence            98753                                 68999999999999754          37899999988643

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.61  E-value=3.5e-16  Score=120.69  Aligned_cols=103  Identities=20%  Similarity=0.280  Sum_probs=84.5

Q ss_pred             HHHHHHhhcCCcceEEEeeeeecC----CcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         14 HILKELTELHHENVVELLHCKESD----QHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        14 ~~~~~l~~l~h~~iv~l~~~~~~~----~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      .++..++.++||||+++++++...    ...|++|||+ +++|..++... +.+++.....++.+++.++.++|..    
T Consensus        97 ~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~----  171 (364)
T 3op5_A           97 QKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH----  171 (364)
T ss_dssp             HHHHHHTTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHhhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            344556778999999999988764    4589999999 88998877554 5689999999999999999998863    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++||||||+||+++.+        ....++|+|||+++.+
T Consensus       172 -----------------------------~iiHrDlkp~Nill~~~--------~~~~~kl~DFG~a~~~  204 (364)
T 3op5_A          172 -----------------------------EYVHGDIKASNLLLNYK--------NPDQVYLVDYGLAYRY  204 (364)
T ss_dssp             -----------------------------TEECCCCCGGGEEEESS--------CTTCEEECCCTTCEES
T ss_pred             -----------------------------CeEEecCCHHHEEEecC--------CCCeEEEEECCcceec
Confidence                                         68999999999999832        2347899999999654

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.61  E-value=5.6e-16  Score=116.78  Aligned_cols=108  Identities=29%  Similarity=0.472  Sum_probs=93.1

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|+++++.++||||+++++++......|+++|+++++++.+++.. ...+++.....+..+++.++.++|..  
T Consensus        67 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--  144 (314)
T 3com_A           67 DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM--  144 (314)
T ss_dssp             CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            345678899999999999999999999999999999999999999887652 35678889999999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|+|++|+||+++.+          +.++|+|||+++.+
T Consensus       145 -------------------------------~i~H~dl~p~Nil~~~~----------~~~kl~dfg~~~~~  175 (314)
T 3com_A          145 -------------------------------RKIHRDIKAGNILLNTE----------GHAKLADFGVAGQL  175 (314)
T ss_dssp             -------------------------------TEECCCCSGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             -------------------------------CCcCCCcCHHHEEECCC----------CCEEEeecccchhh
Confidence                                           68999999999999754          37899999998654

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.61  E-value=7.4e-16  Score=115.73  Aligned_cols=108  Identities=27%  Similarity=0.463  Sum_probs=89.9

Q ss_pred             HHHHHHHHH-hhcCCcceEEEeeeeec----CCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhh
Q psy11428         11 LTRHILKEL-TELHHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus        11 ~~~~~~~~l-~~l~h~~iv~l~~~~~~----~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ...+|++++ +.++||||+++++++..    ....|+++||+++++|..++...+  .+++.....+..+++.++.++|.
T Consensus        56 ~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  135 (299)
T 3m2w_A           56 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS  135 (299)
T ss_dssp             HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            456777777 56699999999998876    678999999999999988876543  58899999999999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|||+||+||+++...       .+..++|+|||+++..
T Consensus       136 ~---------------------------------~i~H~dlkp~Nil~~~~~-------~~~~~kl~Dfg~a~~~  170 (299)
T 3m2w_A          136 I---------------------------------NIAHRDVKPENLLYTSKR-------PNAILKLTDFGFAKET  170 (299)
T ss_dssp             T---------------------------------TEECCCCSGGGEEESSSS-------TTCCEEECCCTTCEEC
T ss_pred             C---------------------------------CcccCCCCHHHEEEecCC-------CCCcEEEecccccccc
Confidence            3                                 689999999999998532       2457999999999754

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.61  E-value=8.7e-16  Score=115.90  Aligned_cols=109  Identities=26%  Similarity=0.349  Sum_probs=92.0

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeee----cCCcEEEEEEEeCCCceeEEEee----ecCCCHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKE----SDQHVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLKQIVQA   77 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~----~~~~~~lv~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~~~~~   77 (160)
                      ......+++|+++++.++||||+++++++.    .....|+++|++.+++|..++..    ...+++.....++.+++.+
T Consensus        67 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~  146 (317)
T 2buj_A           67 QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRG  146 (317)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence            455677889999999999999999999876    34578999999999999877654    3557888999999999999


Q ss_pred             HHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         78 LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        78 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +.++|..                                 +++|+|+||+||+++.+          ..++|+|||+++.
T Consensus       147 L~~LH~~---------------------------------~ivH~dlkp~NIl~~~~----------~~~kl~dfg~~~~  183 (317)
T 2buj_A          147 LEAIHAK---------------------------------GYAHRDLKPTNILLGDE----------GQPVLMDLGSMNQ  183 (317)
T ss_dssp             HHHHHHT---------------------------------TEECCCCCGGGEEECTT----------SCEEECCCSSCEE
T ss_pred             HHHHHhC---------------------------------CcccCCCCHHHEEEcCC----------CCEEEEecCcchh
Confidence            9998753                                 68999999999999744          3789999998754

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.61  E-value=5.2e-16  Score=118.99  Aligned_cols=104  Identities=33%  Similarity=0.515  Sum_probs=88.0

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      .+.+|+++++.++||||+++++++......++++|++++ ++..++... ..+++.....+..+++.++.++|..     
T Consensus        58 ~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-----  131 (346)
T 1ua2_A           58 TALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH-----  131 (346)
T ss_dssp             HHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            566899999999999999999999999999999999986 665554433 3577888889999999999998753     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       132 ----------------------------~ivH~Dlkp~Nil~~~~----------~~~kl~Dfg~a~~~  162 (346)
T 1ua2_A          132 ----------------------------WILHRDLKPNNLLLDEN----------GVLKLADFGLAKSF  162 (346)
T ss_dssp             ----------------------------TCCCCCCCGGGEEECTT----------CCEEECCCGGGSTT
T ss_pred             ----------------------------CEECCCCCHHHEEEcCC----------CCEEEEecccceec
Confidence                                        68999999999999854          37899999998754

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.60  E-value=7.6e-16  Score=122.83  Aligned_cols=108  Identities=31%  Similarity=0.518  Sum_probs=85.9

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecC------CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESD------QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~------~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (160)
                      +......+.+|+++++.++||||+++++++...      ..+|+|+||++++ +...+  ...+++.....++.+++.++
T Consensus       101 ~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~-l~~~~--~~~l~~~~~~~~~~qil~aL  177 (464)
T 3ttj_A          101 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVI--QMELDHERMSYLLYQMLCGI  177 (464)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEE-HHHHH--TSCCCHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEEEeCCCCC-HHHHH--hhcCCHHHHHHHHHHHHHHH
Confidence            344566788999999999999999999998654      3579999999765 33222  23478888889999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .++|..                                 +++||||||+||+++.+          +.+||+|||+++..
T Consensus       178 ~~lH~~---------------------------------~iiHrDlkp~NIll~~~----------~~~kl~DFG~a~~~  214 (464)
T 3ttj_A          178 KHLHSA---------------------------------GIIHRDLKPSNIVVKSD----------CTLKILDFGLARTA  214 (464)
T ss_dssp             HHHHHT---------------------------------TCCCCCCCGGGEEECTT----------SCEEECCCCCC---
T ss_pred             HHHHHC---------------------------------CcccCCCChHhEEEeCC----------CCEEEEEEEeeeec
Confidence            998863                                 68999999999999854          37999999999754

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.60  E-value=1.3e-16  Score=123.71  Aligned_cols=109  Identities=13%  Similarity=0.150  Sum_probs=84.8

Q ss_pred             hhHHHHHHHHH---HHHhhcCCcceEEEe-------eeeecCC-----------------cEEEEEEEeCCCceeEEEee
Q psy11428          6 KSSIVLTRHIL---KELTELHHENVVELL-------HCKESDQ-----------------HVYLVMEFCNGGDLADYLVS   58 (160)
Q Consensus         6 ~~~~~~~~~~~---~~l~~l~h~~iv~l~-------~~~~~~~-----------------~~~lv~e~~~~g~l~~~l~~   58 (160)
                      ......+++|+   +.++.++||||++++       +.+...+                 ..|++|||+ +|+|.+++..
T Consensus       114 ~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~  192 (377)
T 3byv_A          114 SNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEV  192 (377)
T ss_dssp             TTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHh
Confidence            34566777888   566677899999987       5554443                 389999999 6799888766


Q ss_pred             ecCCCH-------HHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeee
Q psy11428         59 KGTLSE-------DTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL  131 (160)
Q Consensus        59 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~  131 (160)
                      .+.+++       .....++.+++.++.++|..                                 +++||||||+||++
T Consensus       193 ~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---------------------------------~ivHrDikp~NIll  239 (377)
T 3byv_A          193 LLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---------------------------------GLVHTYLRPVDIVL  239 (377)
T ss_dssp             HHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---------------------------------TEECSCCCGGGEEE
T ss_pred             ccccccccccccHHHHHHHHHHHHHHHHHHHhC---------------------------------CeecCCCCHHHEEE
Confidence            555554       66677889999999998863                                 68999999999999


Q ss_pred             ecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428        132 SHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus       132 ~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +.+          +.+||+|||+++..
T Consensus       240 ~~~----------~~~kL~DFG~a~~~  256 (377)
T 3byv_A          240 DQR----------GGVFLTGFEHLVRD  256 (377)
T ss_dssp             CTT----------CCEEECCGGGCEET
T ss_pred             cCC----------CCEEEEechhheec
Confidence            854          37999999998743

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.60  E-value=1e-15  Score=114.16  Aligned_cols=110  Identities=33%  Similarity=0.433  Sum_probs=90.8

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee---cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK---GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      .....+.+|+.+++.++||||+++++++...+..++++|+++++++..++...   ...++.....+..+++.++.++|.
T Consensus        61 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~  140 (295)
T 2clq_A           61 RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD  140 (295)
T ss_dssp             ---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh
Confidence            34566788999999999999999999999999999999999999998876543   134577778888999999999875


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|+|++|+||+++..         +..++|+|||+++..
T Consensus       141 ~---------------------------------~i~H~dl~p~Nil~~~~---------~~~~kl~Dfg~~~~~  173 (295)
T 2clq_A          141 N---------------------------------QIVHRDIKGDNVLINTY---------SGVLKISDFGTSKRL  173 (295)
T ss_dssp             T---------------------------------TEECCCCSGGGEEEETT---------TCCEEECCTTTCEES
T ss_pred             C---------------------------------CEEccCCChhhEEEECC---------CCCEEEeeccccccc
Confidence            3                                 68999999999999852         237899999998654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.60  E-value=1.2e-15  Score=112.38  Aligned_cols=111  Identities=15%  Similarity=0.184  Sum_probs=91.9

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~   80 (160)
                      +......+.+|+++++.++||||+++++++.+.  ...++++|++++++|.+++....  .+++.....+..+++.++.+
T Consensus        47 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~  126 (271)
T 3kmu_A           47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF  126 (271)
T ss_dssp             CHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHH
Confidence            344556788999999999999999999998877  78899999999999998876554  47888999999999999998


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      +|...                               ..++|+|+||+||+++.+          +.+++.|||++.
T Consensus       127 lH~~~-------------------------------~~i~H~dikp~Nil~~~~----------~~~~l~~~~~~~  161 (271)
T 3kmu_A          127 LHTLE-------------------------------PLIPRHALNSRSVMIDED----------MTARISMADVKF  161 (271)
T ss_dssp             HTTSS-------------------------------SCCTTCCCSGGGEEECTT----------SCEEEEGGGSCC
T ss_pred             HhcCC-------------------------------CceecCCCccceEEEcCC----------cceeEEecccee
Confidence            87420                               128999999999999854          367888887764

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.60  E-value=2.5e-15  Score=113.13  Aligned_cols=107  Identities=37%  Similarity=0.598  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCC-----cEEEEEEEeCCCceeEEEeeecC--CCHHHHHHHHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQ-----HVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~-----~~~lv~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~   80 (160)
                      ....+..+++.++.++||||+++++++....     ..++++|++. +++..++.....  +++.....++.+++.++.+
T Consensus        57 ~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~  135 (308)
T 3g33_A           57 STVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF  135 (308)
T ss_dssp             HHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence            3444444555555567999999999887655     5899999997 487776654433  7899999999999999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..                                 +++|||+||+||+++.+          ..++|+|||+++..
T Consensus       136 lH~~---------------------------------~ivH~Dlkp~Nil~~~~----------~~~kl~Dfg~a~~~  170 (308)
T 3g33_A          136 LHAN---------------------------------CIVHRDLKPENILVTSG----------GTVKLADFGLARIY  170 (308)
T ss_dssp             HHHT---------------------------------TCCCSCCCTTTEEECTT----------SCEEECSCSCTTTS
T ss_pred             HHHC---------------------------------CcccCCCCHHHEEEcCC----------CCEEEeeCcccccc
Confidence            8863                                 68999999999999754          37999999998754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.60  E-value=1e-15  Score=117.23  Aligned_cols=105  Identities=33%  Similarity=0.560  Sum_probs=85.4

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeec--------CCcEEEEEEEeCCCceeEEEe-eecCCCHHHHHHHHHHHHHHHHH
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKES--------DQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~--------~~~~~lv~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      ..+.+|+++++.++||||+++++++..        .+..|+|+||+++ ++...+. ..+.+++..+..++.+++.++.+
T Consensus        61 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~  139 (351)
T 3mi9_A           61 ITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYY  139 (351)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHH
Confidence            456689999999999999999998876        4468999999986 4443332 23568889999999999999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..                                 +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       140 LH~~---------------------------------~ivH~Dlkp~NIl~~~~----------~~~kl~Dfg~a~~~  174 (351)
T 3mi9_A          140 IHRN---------------------------------KILHRDMKAANVLITRD----------GVLKLADFGLARAF  174 (351)
T ss_dssp             HHHT---------------------------------TEECCCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             HHHC---------------------------------CeeCCCCCHHHEEEcCC----------CCEEEccchhcccc
Confidence            8853                                 68999999999999854          37999999998654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.60  E-value=1.1e-15  Score=115.37  Aligned_cols=112  Identities=30%  Similarity=0.385  Sum_probs=86.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec---CCCHHHHHHHHHHHHHHHHHhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG---TLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      .+....+.+|+++++.++||||+++++++.  +..|+++||+++++|.+++....   .++......+..+++.++.++|
T Consensus        42 ~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH  119 (307)
T 2eva_A           42 ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH  119 (307)
T ss_dssp             TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence            345567889999999999999999999885  45899999999999988775443   2567777788889999998877


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..   ++                           .+++|||+||+||+++.++         ..+||+|||+++..
T Consensus       120 ~~---~~---------------------------~~ivH~dlkp~NIll~~~~---------~~~kl~Dfg~~~~~  156 (307)
T 2eva_A          120 SM---QP---------------------------KALIHRDLKPPNLLLVAGG---------TVLKICDFGTACDI  156 (307)
T ss_dssp             TC---SS---------------------------SCCCCCCCSGGGEEEETTT---------TEEEECCCCC----
T ss_pred             hC---CC---------------------------CCeecCCCChhHEEEeCCC---------CEEEEccccccccc
Confidence            41   10                           1589999999999998532         24799999998643

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.60  E-value=2.1e-15  Score=114.73  Aligned_cols=110  Identities=30%  Similarity=0.472  Sum_probs=92.5

Q ss_pred             HHHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          9 IVLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ...+.+|+++++.+. ||||+++++++......|+++||++++++..++..  .+.+++..+..++.+++.++.++|.. 
T Consensus        72 ~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~-  150 (327)
T 3lm5_A           72 RAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN-  150 (327)
T ss_dssp             HHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            456778899998884 69999999999999999999999999999887643  25678899999999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|||+||+||+++...       ..+.++|+|||+++.+
T Consensus       151 --------------------------------givH~Dikp~NIl~~~~~-------~~~~~kL~Dfg~a~~~  184 (327)
T 3lm5_A          151 --------------------------------NIVHLDLKPQNILLSSIY-------PLGDIKIVDFGMSRKI  184 (327)
T ss_dssp             --------------------------------TEECSCCCGGGEEESCBT-------TBCCEEECCGGGCEEC
T ss_pred             --------------------------------CeecCcCChHHEEEecCC-------CCCcEEEeeCcccccc
Confidence                                            689999999999997521       2457999999998754

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.59  E-value=3.2e-15  Score=113.39  Aligned_cols=106  Identities=29%  Similarity=0.506  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHHhhcC-CcceEEEeeeeec--CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          8 SIVLTRHILKELTELH-HENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~--~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ....+.+|+++++.++ ||||+++++++..  ....++++|+++++++..++   ..+++.....++.+++.++.++|..
T Consensus        73 ~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~  149 (330)
T 3nsz_A           73 KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYMYEILKALDYCHSM  149 (330)
T ss_dssp             CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCCCCHHHHG---GGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCchhHHHHH---HhCCHHHHHHHHHHHHHHHHHHHhC
Confidence            3456788999999997 9999999999887  67789999999999987654   3478888889999999999998853


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++||||||+||+++.++         ..++|+|||+++..
T Consensus       150 ---------------------------------~ivH~Dikp~Nil~~~~~---------~~~kl~Dfg~a~~~  181 (330)
T 3nsz_A          150 ---------------------------------GIMHRDVKPHNVMIDHEH---------RKLRLIDWGLAEFY  181 (330)
T ss_dssp             ---------------------------------TEECCCCSGGGEEEETTT---------TEEEECCCTTCEEC
T ss_pred             ---------------------------------CeeeCCCCHHHEEEcCCC---------CEEEEEeCCCceEc
Confidence                                             689999999999998432         37899999999754

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.59  E-value=1.8e-15  Score=116.14  Aligned_cols=118  Identities=23%  Similarity=0.373  Sum_probs=91.7

Q ss_pred             hHHHHHHHHHHHHhhcC-----CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELH-----HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~-----h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~   79 (160)
                      ........|.++++.++     ||||+++++++...+..|+++|++ ++++..++....  .++...+..++.+++.++.
T Consensus        73 ~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~  151 (360)
T 3llt_A           73 KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALN  151 (360)
T ss_dssp             HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence            34455677888888886     999999999999999999999999 889887765443  4788889999999999999


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCC-------CC--------CCCC
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ-------YP--------QPQH  144 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~-------~~--------~~~~  144 (160)
                      ++|..                                 +++||||||+||+++......       ..        ....
T Consensus       152 ~LH~~---------------------------------~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  198 (360)
T 3llt_A          152 YLRKM---------------------------------SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKS  198 (360)
T ss_dssp             HHHHT---------------------------------TEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESC
T ss_pred             HHHHC---------------------------------CeeeCCCCcccEEEccccccccccchhcccccccccccccCC
Confidence            98753                                 689999999999997410000       00        0024


Q ss_pred             ceEEEeeeeccccc
Q psy11428        145 IKLKIADFGFARFL  158 (160)
Q Consensus       145 ~~~~l~dfg~a~~~  158 (160)
                      ..++|+|||+++..
T Consensus       199 ~~~kl~DFG~a~~~  212 (360)
T 3llt_A          199 TGIKLIDFGCATFK  212 (360)
T ss_dssp             CCEEECCCTTCEET
T ss_pred             CCEEEEeccCceec
Confidence            57899999998754

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.59  E-value=1.9e-15  Score=112.52  Aligned_cols=109  Identities=28%  Similarity=0.359  Sum_probs=88.7

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+++++.++||||+++++++....  ++++|+++++++..++... ..+++.....+..+++.++.++|..    
T Consensus        68 ~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~----  141 (287)
T 4f0f_A           68 QEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ----  141 (287)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS----
T ss_pred             HHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC----
Confidence            56788999999999999999999986554  7999999999997766443 4578888899999999999988753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCccc--ceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLAR--IVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~--iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +  ++|+|+||+||+++.++.     +....++|+|||+++..
T Consensus       142 -----------------------------~~~ivH~dikp~Nil~~~~~~-----~~~~~~kl~Dfg~~~~~  179 (287)
T 4f0f_A          142 -----------------------------NPPIVHRDLRSPNIFLQSLDE-----NAPVCAKVADFGLSQQS  179 (287)
T ss_dssp             -----------------------------SSCCBCSCCSGGGEEESCCCT-----TCSCCEEECCCTTCBCC
T ss_pred             -----------------------------CCCeecCCCCcceEEEeccCC-----CCceeEEeCCCCccccc
Confidence                                         4  899999999999975431     12334899999998643

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.59  E-value=5.2e-16  Score=115.20  Aligned_cols=108  Identities=31%  Similarity=0.485  Sum_probs=85.7

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeec-CCcEEEEEEEeCCCceeEEEeeecC--CCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKES-DQHVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~-~~~~~lv~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ....+.+|+++++.++||||+++++.+.. .+..|+++|++++++|.+++...+.  +++.....+..+++.++.++|..
T Consensus        57 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~  136 (278)
T 1byg_A           57 TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN  136 (278)
T ss_dssp             --HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC
Confidence            45567889999999999999999998654 4578999999999999887755432  67788888999999999988753


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       137 ---------------------------------~i~H~dlkp~Nil~~~~----------~~~~l~Dfg~~~~~  167 (278)
T 1byg_A          137 ---------------------------------NFVHRDLAARNVLVSED----------NVAKVSDFGLTKEA  167 (278)
T ss_dssp             ---------------------------------TCCCSCCSGGGEEECTT----------SCEEECCCCC----
T ss_pred             ---------------------------------CccccCCCcceEEEeCC----------CcEEEeeccccccc
Confidence                                             68999999999999744          37899999998643

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.58  E-value=2.6e-15  Score=113.50  Aligned_cols=103  Identities=27%  Similarity=0.400  Sum_probs=83.2

Q ss_pred             HHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         12 TRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        12 ~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ...++..+..+ +||||+++++++..++..|+++|++ ++++..++... ..+++.....++.+++.++.++|..     
T Consensus       103 ~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~-----  176 (311)
T 3p1a_A          103 KLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ-----  176 (311)
T ss_dssp             HHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            33444444444 8999999999999999999999999 55776655443 4588999999999999999998853     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++|||+||+||+++.+          ..+||+|||+++..
T Consensus       177 ----------------------------~ivH~Dikp~NIll~~~----------~~~kl~DFG~a~~~  207 (311)
T 3p1a_A          177 ----------------------------GLVHLDVKPANIFLGPR----------GRCKLGDFGLLVEL  207 (311)
T ss_dssp             ----------------------------TEECCCCSGGGEEECGG----------GCEEECCCTTCEEC
T ss_pred             ----------------------------CEecCCCCHHHEEECCC----------CCEEEccceeeeec
Confidence                                        68999999999999754          37999999998654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.58  E-value=2e-15  Score=114.94  Aligned_cols=115  Identities=24%  Similarity=0.323  Sum_probs=89.7

Q ss_pred             HHHHHHHHHHHHhh--cCCcceEEEeeeeecCC----cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          8 SIVLTRHILKELTE--LHHENVVELLHCKESDQ----HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         8 ~~~~~~~~~~~l~~--l~h~~iv~l~~~~~~~~----~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      ....+..|.++++.  ++||||+++++++....    ..|+++|++++++|.+++.. ..+++.....+..+++.++.++
T Consensus        77 ~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~l  155 (342)
T 1b6c_B           77 EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHL  155 (342)
T ss_dssp             GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHHH
Confidence            34456677788777  79999999999988775    89999999999999888743 4578888889999999999988


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |......                         ..-.+++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       156 H~~~~~~-------------------------~~~~~ivH~Dlkp~NIll~~~----------~~~kL~Dfg~~~~~  197 (342)
T 1b6c_B          156 HMEIVGT-------------------------QGKPAIAHRDLKSKNILVKKN----------GTCCIADLGLAVRH  197 (342)
T ss_dssp             HCCBCST-------------------------TCBCEEECSCCSGGGEEECTT----------SCEEECCCTTCEEE
T ss_pred             HHHHhhh-------------------------cccCCeeeCCCCHHHEEECCC----------CCEEEEECCCceec
Confidence            7311000                         000268999999999999754          37999999998643

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.58  E-value=1.5e-15  Score=116.75  Aligned_cols=106  Identities=30%  Similarity=0.456  Sum_probs=85.1

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeee-----cCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKE-----SDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~-----~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      ....+.+|+++++.++||||+++++++.     .....|+++|++++ ++...+... ..+++.....++.+++.++.++
T Consensus        72 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~l  150 (362)
T 3pg1_A           72 LCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHDQRIVISPQHIQYFMYHILLGLHVL  150 (362)
T ss_dssp             HHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence            3567889999999999999999999884     33468999999984 665554433 3578889999999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      |..                                 +++|+|+||+||+++.+          ..++|+|||+++.
T Consensus       151 H~~---------------------------------~ivH~Dlkp~NIl~~~~----------~~~kl~Dfg~~~~  183 (362)
T 3pg1_A          151 HEA---------------------------------GVVHRDLHPGNILLADN----------NDITICDFNLARE  183 (362)
T ss_dssp             HHT---------------------------------TCCCCCCCGGGEEECTT----------CCEEECCTTC---
T ss_pred             HHC---------------------------------cCEecCCChHHEEEcCC----------CCEEEEecCcccc
Confidence            863                                 68999999999999744          3799999999864

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.58  E-value=3.4e-15  Score=115.53  Aligned_cols=107  Identities=30%  Similarity=0.515  Sum_probs=85.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCC------cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQ------HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~------~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ......+.+|+.+++.++||||+++++++....      ..|+++|++++ ++...+  ...+++.....++.+++.++.
T Consensus        65 ~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~--~~~~~~~~~~~i~~qi~~al~  141 (371)
T 2xrw_A           65 QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDA-NLCQVI--QMELDHERMSYLLYQMLCGIK  141 (371)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECCSE-EHHHHH--HSCCCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEEEcCCC-CHHHHH--hhccCHHHHHHHHHHHHHHHH
Confidence            445567788999999999999999999887655      78999999975 454443  245788888889999999999


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++||||||+||+++.+          +.+||+|||+++..
T Consensus       142 ~lH~~---------------------------------~ivH~Dlkp~NIl~~~~----------~~~kl~Dfg~a~~~  177 (371)
T 2xrw_A          142 HLHSA---------------------------------GIIHRDLKPSNIVVKSD----------CTLKILDFGLARTA  177 (371)
T ss_dssp             HHHHT---------------------------------TCCCSCCCGGGEEECTT----------SCEEECCCCC----
T ss_pred             HHHHC---------------------------------CeecccCCHHHEEEcCC----------CCEEEEEeeccccc
Confidence            98753                                 68999999999999854          37999999998753

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.58  E-value=3.1e-15  Score=111.75  Aligned_cols=109  Identities=24%  Similarity=0.383  Sum_probs=91.2

Q ss_pred             HHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         11 LTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        11 ~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      .+.+|+++++.+ +||+++++++.+......++++|++ +++|.+++...+ .+++.....+..+++.++.++|..    
T Consensus        51 ~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----  125 (298)
T 1csn_A           51 QLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK----  125 (298)
T ss_dssp             CHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT----
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            466788888888 7999999999999999999999999 899988876543 488999999999999999998753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|||+||+||+++.++.     +....++|+|||+++.+
T Consensus       126 -----------------------------~ivH~Dlkp~NIl~~~~~~-----~~~~~~kl~Dfg~~~~~  161 (298)
T 1csn_A          126 -----------------------------SLVYRDIKPDNFLIGRPNS-----KNANMIYVVDFGMVKFY  161 (298)
T ss_dssp             -----------------------------TEECCCCCGGGEEECCSSS-----TTTTCEEECCCTTCEES
T ss_pred             -----------------------------CEecCCCCHHHEEeccCCC-----CCCCeEEEEECcccccc
Confidence                                         6899999999999985431     12345999999998754

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.57  E-value=4.3e-15  Score=111.78  Aligned_cols=109  Identities=34%  Similarity=0.615  Sum_probs=89.8

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeee--------------cCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKE--------------SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL   71 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~--------------~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~   71 (160)
                      ......+.+|+++++.++||||+++++.+.              .....|+++|+++ +++..++. .+.+++.....+.
T Consensus        49 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~~~~~~~~~~~  126 (320)
T 2i6l_A           49 PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLE-QGPLLEEHARLFM  126 (320)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHT-TCCCCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhh-cCCccHHHHHHHH
Confidence            455677889999999999999999998763              4467899999997 57776653 4567888888999


Q ss_pred             HHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEee
Q psy11428         72 KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIAD  151 (160)
Q Consensus        72 ~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~d  151 (160)
                      .+++.++.++|..                                 +++|+|+||+||+++..         +..++|+|
T Consensus       127 ~qi~~~l~~lH~~---------------------------------~i~H~dlkp~Nil~~~~---------~~~~kl~D  164 (320)
T 2i6l_A          127 YQLLRGLKYIHSA---------------------------------NVLHRDLKPANLFINTE---------DLVLKIGD  164 (320)
T ss_dssp             HHHHHHHHHHHHT---------------------------------TCBCCCCSGGGEEEETT---------TTEEEECC
T ss_pred             HHHHHHHHHHHhC---------------------------------CEecCCCCHHHEEEcCC---------CCeEEEcc
Confidence            9999999998753                                 68999999999999742         24789999


Q ss_pred             eeccccc
Q psy11428        152 FGFARFL  158 (160)
Q Consensus       152 fg~a~~~  158 (160)
                      ||+++..
T Consensus       165 fg~~~~~  171 (320)
T 2i6l_A          165 FGLARIM  171 (320)
T ss_dssp             CTTCBCC
T ss_pred             Ccccccc
Confidence            9998754

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.57  E-value=2.1e-15  Score=114.24  Aligned_cols=108  Identities=30%  Similarity=0.569  Sum_probs=89.6

Q ss_pred             HHHHHHHHHHHHhhc-CCcceEEEeeeeec------CCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTEL-HHENVVELLHCKES------DQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~------~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~   78 (160)
                      ....+.+|+.+++.+ +||||+++++++..      ....|+++|++++++|.+++...  ..+++.....++.+++.++
T Consensus        63 ~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l  142 (326)
T 2x7f_A           63 EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGL  142 (326)
T ss_dssp             TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence            345677899999998 79999999998876      56899999999999998876543  4578888889999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .++|..                                 +++|+|++|+||+++.+          +.++|+|||+++.+
T Consensus       143 ~~lH~~---------------------------------~ivH~dlkp~NIl~~~~----------~~~kl~Dfg~~~~~  179 (326)
T 2x7f_A          143 SHLHQH---------------------------------KVIHRDIKGQNVLLTEN----------AEVKLVDFGVSAQL  179 (326)
T ss_dssp             HHHHHT---------------------------------TCCCCCCSGGGEEECTT----------CCEEECCCTTTC--
T ss_pred             HHHHHC---------------------------------CccccCCcHHHEEEcCC----------CCEEEeeCcCceec
Confidence            998753                                 68999999999999744          37899999998653

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.57  E-value=3.2e-15  Score=112.13  Aligned_cols=108  Identities=31%  Similarity=0.529  Sum_probs=86.2

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeee--ecCCcEEEEEEEeCCCceeEEEee--ecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCK--ESDQHVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~--~~~~~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      .....+++|+++++.++||||+++++++  ......|+++|+++++ +...+..  .+.+++.....+..+++.++.++|
T Consensus        48 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH  126 (305)
T 2wtk_C           48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH  126 (305)
T ss_dssp             THHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH
Confidence            3456788999999999999999999988  4556899999999876 3333322  345788888899999999999987


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|+||+||+++.+          +.++++|||+++..
T Consensus       127 ~~---------------------------------~i~H~dlkp~NIl~~~~----------~~~kl~dfg~~~~~  159 (305)
T 2wtk_C          127 SQ---------------------------------GIVHKDIKPGNLLLTTG----------GTLKISALGVAEAL  159 (305)
T ss_dssp             HT---------------------------------TEECSCCSGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             HC---------------------------------CeeecCCCcccEEEcCC----------CcEEeecccccccc
Confidence            53                                 68999999999999754          37899999998654

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=99.57  E-value=1.4e-15  Score=113.72  Aligned_cols=105  Identities=35%  Similarity=0.582  Sum_probs=88.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ...+.+|+++++.++||||+++++++..++..|+++|++. +++..++...  ..++......+..+++.++.++|..  
T Consensus        46 ~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--  122 (299)
T 2r3i_A           46 PSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--  122 (299)
T ss_dssp             CHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC--
Confidence            3567789999999999999999999999999999999997 5776665443  3577888888999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                     +++|+|+||+||+++.+          +.++|+|||+++.
T Consensus       123 -------------------------------~i~H~dlkp~Nili~~~----------~~~kl~dfg~~~~  152 (299)
T 2r3i_A          123 -------------------------------RVLHRDLKPQNLLINTE----------GAIKLADFGLARA  152 (299)
T ss_dssp             -------------------------------TCCCCCCCGGGEEECTT----------SCEEECSTTHHHH
T ss_pred             -------------------------------CccCCCCCHHHeEEcCC----------CCEEECcchhhhh
Confidence                                           68999999999999754          3789999998864

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.57  E-value=3.5e-15  Score=113.26  Aligned_cols=111  Identities=26%  Similarity=0.380  Sum_probs=85.4

Q ss_pred             HHHHHHHHhh--cCCcceEEEeeeeecC----CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428         12 TRHILKELTE--LHHENVVELLHCKESD----QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus        12 ~~~~~~~l~~--l~h~~iv~l~~~~~~~----~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ...+.+++..  ++||||+++++++...    ...|+++||+++++|.+++.. ..+++.....+..+++.++.++|..-
T Consensus        76 ~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~lH~~~  154 (337)
T 3mdy_A           76 WFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGLCHLHTEI  154 (337)
T ss_dssp             HHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHSCB
T ss_pred             hhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            3445555444  4999999999988776    789999999999999888743 46888888999999999999887421


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ...                         ..-.+++|||+||+||+++.+          ..+||+|||+++.+
T Consensus       155 ~~~-------------------------~~~~~ivH~Dikp~Nill~~~----------~~~kl~Dfg~a~~~  192 (337)
T 3mdy_A          155 FST-------------------------QGKPAIAHRDLKSKNILVKKN----------GTCCIADLGLAVKF  192 (337)
T ss_dssp             CST-------------------------TCBCCEECSCCCGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             hhh-------------------------ccCCCEEecccchHHEEECCC----------CCEEEEeCCCceee
Confidence            100                         001268999999999999744          37999999998654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.56  E-value=1.3e-15  Score=115.80  Aligned_cols=102  Identities=33%  Similarity=0.578  Sum_probs=86.4

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         13 RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                      .+|+++++.++||||+++++++......++++||+++ ++..++... ..+++.....++.+++.++.++|..       
T Consensus        48 ~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~-------  119 (324)
T 3mtl_A           48 IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ-------  119 (324)
T ss_dssp             CCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-------
T ss_pred             HHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEeccccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC-------
Confidence            3688999999999999999999999999999999974 666655443 3478888889999999999998853       


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                +++|||+||+||+++.+          +.++|+|||+++..
T Consensus       120 --------------------------~ivH~Dikp~NIl~~~~----------~~~kl~Dfg~a~~~  150 (324)
T 3mtl_A          120 --------------------------KVLHRDLKPQNLLINER----------GELKLADFGLARAK  150 (324)
T ss_dssp             --------------------------TEEESSCCGGGEEECTT----------CCEEECSSSEEECC
T ss_pred             --------------------------CccCCCcCHHHEEECCC----------CCEEEccCcccccc
Confidence                                      68999999999999854          37999999998643

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.56  E-value=2.1e-15  Score=117.73  Aligned_cols=104  Identities=31%  Similarity=0.417  Sum_probs=82.5

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeecCCc------EEEEEEEeCCCceeEE---EeeecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428         13 RHILKELTELHHENVVELLHCKESDQH------VYLVMEFCNGGDLADY---LVSKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~~~~------~~lv~e~~~~g~l~~~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      .+|+++++.++||||+++++++...+.      .++++||++++.+...   ......+++..+..++.+++.++.++|.
T Consensus        80 ~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~  159 (394)
T 4e7w_A           80 NRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS  159 (394)
T ss_dssp             CHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            368999999999999999998854433      8999999987543221   1123567888899999999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++||||||+||+++..         ++.+||+|||+++.+
T Consensus       160 ~---------------------------------~ivHrDlkp~Nill~~~---------~~~~kL~DFG~a~~~  192 (394)
T 4e7w_A          160 I---------------------------------GICHRDIKPQNLLLDPP---------SGVLKLIDFGSAKIL  192 (394)
T ss_dssp             T---------------------------------TEECSCCSGGGEEEETT---------TTEEEECCCTTCEEC
T ss_pred             C---------------------------------CccCCCCCHHHEEEcCC---------CCcEEEeeCCCcccc
Confidence            3                                 68999999999999732         247999999999754

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.56  E-value=2e-15  Score=117.18  Aligned_cols=103  Identities=29%  Similarity=0.478  Sum_probs=82.8

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeec--------------------------------------CCcEEEEEEEeCCCceeE
Q psy11428         13 RHILKELTELHHENVVELLHCKES--------------------------------------DQHVYLVMEFCNGGDLAD   54 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~--------------------------------------~~~~~lv~e~~~~g~l~~   54 (160)
                      .+|+++++.++||||+++++++..                                      ....+++|||+++ ++..
T Consensus        48 ~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~  126 (383)
T 3eb0_A           48 NRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHK  126 (383)
T ss_dssp             CHHHHHHTTCCCTTBCCEEEEEEEC-------------------------------------CCEEEEEECCCSE-EHHH
T ss_pred             HHHHHHHHHcCCCCccchhheeeecCcccccccccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHH
Confidence            368999999999999999998843                                      3348999999985 5443


Q ss_pred             EEe----eecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCee
Q psy11428         55 YLV----SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL  130 (160)
Q Consensus        55 ~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl  130 (160)
                      .+.    ..+.+++..+..++.+++.++.++|..                                 +++|||+||+||+
T Consensus       127 ~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---------------------------------gi~H~Dikp~Nil  173 (383)
T 3eb0_A          127 VLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL---------------------------------GICHRDIKPQNLL  173 (383)
T ss_dssp             HHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---------------------------------TEECSCCCGGGEE
T ss_pred             HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------------------------------cCccCccCHHHEE
Confidence            332    345688899999999999999998753                                 6899999999999


Q ss_pred             eecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428        131 LSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus       131 ~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++..         +..++|+|||+++.+
T Consensus       174 ~~~~---------~~~~kl~Dfg~a~~~  192 (383)
T 3eb0_A          174 VNSK---------DNTLKLCDFGSAKKL  192 (383)
T ss_dssp             EETT---------TTEEEECCCTTCEEC
T ss_pred             EcCC---------CCcEEEEECCCCccc
Confidence            9732         237999999999754

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.56  E-value=1.3e-15  Score=123.61  Aligned_cols=98  Identities=16%  Similarity=0.212  Sum_probs=79.9

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+.+|++++++++||||+++..........|++|||++|++|.+++..        ...+..+++.++.++|..    
T Consensus       383 ~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~~----  450 (540)
T 3en9_A          383 KSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHKN----  450 (540)
T ss_dssp             HHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHHC----
Confidence            34578999999999999999554444466778999999999999877643        346778899999988753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                   +++|||+||+||+++          .  .+||+|||+++...
T Consensus       451 -----------------------------gIiHrDiKp~NILl~----------~--~~kL~DFGla~~~~  480 (540)
T 3en9_A          451 -----------------------------DVIHNDLTTSNFIFD----------K--DLYIIDFGLGKISN  480 (540)
T ss_dssp             -----------------------------TEECTTCCTTSEEES----------S--SEEECCCTTCEECC
T ss_pred             -----------------------------cCccCCCCHHHEEEC----------C--eEEEEECccCEECC
Confidence                                         689999999999996          2  68999999998654

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.56  E-value=1.6e-15  Score=118.59  Aligned_cols=108  Identities=31%  Similarity=0.512  Sum_probs=84.4

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeee--cCCcEEEEEEEeCCCceeEEEee---------ecCCCHHHHHHHHHHHHHHHH
Q psy11428         11 LTRHILKELTELHHENVVELLHCKE--SDQHVYLVMEFCNGGDLADYLVS---------KGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~--~~~~~~lv~e~~~~g~l~~~l~~---------~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      .+.+|+++|+.++||||+++++++.  ....+|+++||+.+ ++...+..         ...+++..+..++.+++.++.
T Consensus        64 ~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~  142 (405)
T 3rgf_A           64 SACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIH  142 (405)
T ss_dssp             HHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHH
Confidence            5678999999999999999999884  46789999999875 55443321         124788889999999999999


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++||||||+||++....      +.+..++|+|||+++.+
T Consensus       143 ~LH~~---------------------------------~ivH~Dlkp~NIll~~~~------~~~~~~kl~Dfg~a~~~  182 (405)
T 3rgf_A          143 YLHAN---------------------------------WVLHRDLKPANILVMGEG------PERGRVKIADMGFARLF  182 (405)
T ss_dssp             HHHHT---------------------------------TCCCCCCCGGGEEECCSS------TTTTCEEECCTTCCC--
T ss_pred             HHHhC---------------------------------CEeCCCcCHHHeEEecCC------CCCCcEEEEECCCceec
Confidence            98863                                 689999999999995321      24458999999999754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.56  E-value=5.2e-15  Score=113.45  Aligned_cols=108  Identities=28%  Similarity=0.468  Sum_probs=82.5

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCc-------EEEEEEEeCCCcee---EEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQH-------VYLVMEFCNGGDLA---DYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~-------~~lv~e~~~~g~l~---~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      .+..+++.++.++||||+++++++...+.       .++++||++++...   .+......+++.....+..+++.++.+
T Consensus        65 ~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~  144 (360)
T 3e3p_A           65 RELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC  144 (360)
T ss_dssp             HHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHH
Confidence            45677888889999999999998865443       89999999875322   222234567788888899999999988


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..   .                            .+++||||||+||+++..         +..++|+|||+++.+
T Consensus       145 lH~~---~----------------------------~~ivH~Dlkp~NIll~~~---------~~~~kl~Dfg~a~~~  182 (360)
T 3e3p_A          145 LHLP---S----------------------------VNVCHRDIKPHNVLVNEA---------DGTLKLCDFGSAKKL  182 (360)
T ss_dssp             HTST---T----------------------------TCCBCSCCCGGGEEEETT---------TTEEEECCCTTCBCC
T ss_pred             HhCC---C----------------------------CCeecCcCCHHHEEEeCC---------CCcEEEeeCCCceec
Confidence            7621   1                            268999999999999842         248999999999754

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.55  E-value=4.7e-15  Score=113.38  Aligned_cols=107  Identities=33%  Similarity=0.605  Sum_probs=88.1

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecC-----CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESD-----QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~-----~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      .....+.+|+++++.++||||+++++++...     ...|+++|++. +++..++. .+.+++.....+..+++.++.++
T Consensus        51 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~~~~~~~~~~~~qi~~~L~~L  128 (353)
T 2b9h_A           51 LFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVIS-TQMLSDDHIQYFIYQTLRAVKVL  128 (353)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECCCS-EEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEeccC-ccHHHHHh-hcCCCHHHHHHHHHHHHHHHHHH
Confidence            3455677899999999999999999877643     67899999997 46665543 35688889999999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                 +++|||+||+||+++.+          +.++|+|||+++.+
T Consensus       129 H~~---------------------------------~ivH~Dlkp~Nil~~~~----------~~~kl~Dfg~a~~~  162 (353)
T 2b9h_A          129 HGS---------------------------------NVIHRDLKPSNLLINSN----------CDLKVCDFGLARII  162 (353)
T ss_dssp             HHT---------------------------------TEECSCCCGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             HHC---------------------------------CeecCCCCHHHeEEcCC----------CcEEEEeccccccc
Confidence            753                                 68999999999999754          37999999998754

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.55  E-value=2e-15  Score=115.93  Aligned_cols=106  Identities=19%  Similarity=0.212  Sum_probs=87.9

Q ss_pred             HHHHHHHHHhhcCCcceEE---------------Eeeeeec-CCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHH
Q psy11428         11 LTRHILKELTELHHENVVE---------------LLHCKES-DQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLK   72 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~---------------l~~~~~~-~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~   72 (160)
                      .+.+|+++++.++||||++               +++.+.. ....|+++|++ +++|.+++...  +.+++.....++.
T Consensus        88 ~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~  166 (352)
T 2jii_A           88 RLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVAC  166 (352)
T ss_dssp             THHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHH
T ss_pred             hHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHH
Confidence            4678999999999999987               4555554 68899999999 99999887654  6789999999999


Q ss_pred             HHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeee
Q psy11428         73 QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADF  152 (160)
Q Consensus        73 ~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~df  152 (160)
                      +++.++.++|..                                 +++||||||+||+++.++        ...++|+||
T Consensus       167 qi~~~L~~LH~~---------------------------------~ivH~Dikp~NIl~~~~~--------~~~~kl~Df  205 (352)
T 2jii_A          167 RLLDALEFLHEN---------------------------------EYVHGNVTAENIFVDPED--------QSQVTLAGY  205 (352)
T ss_dssp             HHHHHHHHHHHT---------------------------------TCBCSCCCGGGEEEETTE--------EEEEEECCG
T ss_pred             HHHHHHHHHHhC---------------------------------CccCCCCCHHHEEEcCCC--------CceEEEecC
Confidence            999999998863                                 689999999999998431        127899999


Q ss_pred             eccccc
Q psy11428        153 GFARFL  158 (160)
Q Consensus       153 g~a~~~  158 (160)
                      |+++.+
T Consensus       206 g~a~~~  211 (352)
T 2jii_A          206 GFAFRY  211 (352)
T ss_dssp             GGCBCS
T ss_pred             cceeec
Confidence            999654

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.55  E-value=3.6e-15  Score=117.92  Aligned_cols=108  Identities=31%  Similarity=0.483  Sum_probs=85.1

Q ss_pred             HHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         12 TRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        12 ~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      +.+|+++|+.+ +||||+++++++.+....|+++|+++ +++..++.... ...+.....++.+++.++.++|..     
T Consensus        64 ~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~-----  137 (432)
T 3p23_A           64 ADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL-----  137 (432)
T ss_dssp             CHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC-----
Confidence            46789999999 79999999999999999999999996 47777664432 234445567888999999998853     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++||||||+||+++.++     .+....++|+|||+++.+
T Consensus       138 ----------------------------~ivHrDlKp~NIll~~~~-----~~~~~~~kL~DFG~a~~~  173 (432)
T 3p23_A          138 ----------------------------NIVHRDLKPHNILISMPN-----AHGKIKAMISDFGLCKKL  173 (432)
T ss_dssp             ----------------------------TCCCCCCSTTSEEECCCB-----TTTBCCEEECCTTEEECC
T ss_pred             ----------------------------cCEeCCCCHHHEEEecCC-----CCCceeEEEecccceeec
Confidence                                        689999999999996432     123446889999998754

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.54  E-value=5.2e-15  Score=122.46  Aligned_cols=114  Identities=37%  Similarity=0.551  Sum_probs=95.0

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeec------CCcEEEEEEEeCCCceeEEEeeec---CCCHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKES------DQHVYLVMEFCNGGDLADYLVSKG---TLSEDTIRIFLKQIV   75 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~------~~~~~lv~e~~~~g~l~~~l~~~~---~~~~~~~~~~~~~~~   75 (160)
                      +......+..|+++++.++||||+++++++..      ++..|+++||+++++|..++....   .+++..+..++.+++
T Consensus        52 ~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl  131 (676)
T 3qa8_A           52 SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDIS  131 (676)
T ss_dssp             CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHH
Confidence            34556778899999999999999999998765      678899999999999988775533   477888889999999


Q ss_pred             HHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecc
Q psy11428         76 QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA  155 (160)
Q Consensus        76 ~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a  155 (160)
                      .++.++|..                                 +++|+|+||+||+++.++       ....++|+|||++
T Consensus       132 ~aL~yLHs~---------------------------------gIVHrDLKP~NILl~~~g-------~~~~vKL~DFG~a  171 (676)
T 3qa8_A          132 SALRYLHEN---------------------------------RIIHRDLKPENIVLQPGP-------QRLIHKIIDLGYA  171 (676)
T ss_dssp             HHHHHHHHT---------------------------------TBCCCCCCSTTEEEECCS-------SSCEEEECSCCCC
T ss_pred             HHHHHHHHC---------------------------------CCccCCCCHHHeEeecCC-------CceeEEEcccccc
Confidence            999998753                                 689999999999998643       3346899999998


Q ss_pred             ccc
Q psy11428        156 RFL  158 (160)
Q Consensus       156 ~~~  158 (160)
                      +..
T Consensus       172 ~~~  174 (676)
T 3qa8_A          172 KEL  174 (676)
T ss_dssp             CBT
T ss_pred             ccc
Confidence            754

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.54  E-value=3.6e-15  Score=112.38  Aligned_cols=107  Identities=34%  Similarity=0.480  Sum_probs=87.3

Q ss_pred             HHHHHHHHHHhhc----CCcceEEEeeeeecCCcEEEEEEE-eCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428         10 VLTRHILKELTEL----HHENVVELLHCKESDQHVYLVMEF-CNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus        10 ~~~~~~~~~l~~l----~h~~iv~l~~~~~~~~~~~lv~e~-~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ..+.+|+++++.+    +||||+++++++...+..++++++ +.++++.+++...+.+++.....+..+++.++.++|..
T Consensus        79 ~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~  158 (312)
T 2iwi_A           79 VTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR  158 (312)
T ss_dssp             CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3445688888888    899999999999999999999999 78889988877777789999999999999999998864


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|+|+||+||+++..         ++.++|+|||+++..
T Consensus       159 ---------------------------------~i~H~dlkp~Nil~~~~---------~~~~kl~dfg~~~~~  190 (312)
T 2iwi_A          159 ---------------------------------GVVHRDIKDENILIDLR---------RGCAKLIDFGSGALL  190 (312)
T ss_dssp             ---------------------------------TEECCCCSGGGEEEETT---------TTEEEECCCSSCEEC
T ss_pred             ---------------------------------CeeecCCChhhEEEeCC---------CCeEEEEEcchhhhc
Confidence                                             68999999999999832         237899999998754

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.54  E-value=4e-15  Score=113.10  Aligned_cols=109  Identities=23%  Similarity=0.326  Sum_probs=79.6

Q ss_pred             HHHHHhhcCCcceEEEeeeee-----cCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         15 ILKELTELHHENVVELLHCKE-----SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        15 ~~~~l~~l~h~~iv~l~~~~~-----~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ++..++.++||||+++++.+.     .....|+++||+++|+|.+++... ..+......+..+++.++.++|...... 
T Consensus        57 ~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~LH~~~~~~-  134 (336)
T 3g2f_A           57 NIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAYLHTELPRG-  134 (336)
T ss_dssp             HHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHCCBCCG-
T ss_pred             HHHHHHhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHHHHhhhccc-
Confidence            344455689999999987332     334679999999999998887543 3577778888999999999887420000 


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                             ...-.+++||||||+||+++.+          +.+||+|||+++.+
T Consensus       135 -----------------------~~~~~~ivH~Dikp~Nill~~~----------~~~kL~DFG~a~~~  170 (336)
T 3g2f_A          135 -----------------------DHYKPAISHRDLNSRNVLVKND----------GTCVISDFGLSMRL  170 (336)
T ss_dssp             -----------------------GGCBCCEECSSCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             -----------------------cccccceeecccccceEEEcCC----------CcEEEeeccceeec
Confidence                                   0000158999999999999743          37999999999754

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.54  E-value=7.9e-15  Score=113.09  Aligned_cols=108  Identities=36%  Similarity=0.549  Sum_probs=88.8

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecC-----CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESD-----QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~-----~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      ......+.+|+++++.++||||+++++++...     ...|+++|++.+ ++..++. .+.+++.....++.+++.++.+
T Consensus        66 ~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~~~~-~L~~~l~-~~~~~~~~~~~i~~qi~~aL~~  143 (364)
T 3qyz_A           66 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMET-DLYKLLK-TQHLSNDHICYFLYQILRGLKY  143 (364)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEECCSE-EHHHHHH-HCCCCHHHHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcccCc-CHHHHHH-hCCCCHHHHHHHHHHHHHHHHH
Confidence            34456778899999999999999999988654     468999999974 6665543 3568888999999999999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..                                 +++|||+||+||+++.+          +.++|+|||+++..
T Consensus       144 LH~~---------------------------------~ivH~Dikp~NIl~~~~----------~~~kl~Dfg~a~~~  178 (364)
T 3qyz_A          144 IHSA---------------------------------NVLHRDLKPSNLLLNTT----------CDLKICDFGLARVA  178 (364)
T ss_dssp             HHHT---------------------------------TEECCCCCGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             HHHC---------------------------------CeecCCCChHhEEECCC----------CCEEEEeCcceEec
Confidence            8853                                 68999999999999754          37999999998754

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.54  E-value=1.1e-14  Score=109.23  Aligned_cols=105  Identities=14%  Similarity=0.083  Sum_probs=86.9

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+.+|++.++.++||||+++++++..++..|++|||++|++|.+++. .+ ........++.+++.++.++|.. 
T Consensus        72 ~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L~~~l~-~~-~~~~~~~~i~~ql~~aL~~lH~~-  148 (286)
T 3uqc_A           72 DDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVAD-TS-PSPVGAIRAMQSLAAAADAAHRA-  148 (286)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEHHHHHT-TC-CCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCCCCHHHHHh-cC-CChHHHHHHHHHHHHHHHHHHHC-
Confidence            3455778899999999999999999999999999999999999999988763 23 34445677889999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA  155 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a  155 (160)
                                                      +++|||+||+||+++.++          .++++++|..
T Consensus       149 --------------------------------givH~Dikp~NIll~~~g----------~~kl~~~~~~  176 (286)
T 3uqc_A          149 --------------------------------GVALSIDHPSRVRVSIDG----------DVVLAYPATM  176 (286)
T ss_dssp             --------------------------------TCCCCCCSGGGEEEETTS----------CEEECSCCCC
T ss_pred             --------------------------------CCccCCCCcccEEEcCCC----------CEEEEecccc
Confidence                                            689999999999998543          6788876643

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.54  E-value=5.8e-15  Score=111.82  Aligned_cols=110  Identities=29%  Similarity=0.483  Sum_probs=87.4

Q ss_pred             hHHHHHHHHHHHHhhcC-CcceEEEeeee--------ecCCcEEEEEEEeCCCceeEEEee---ecCCCHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELH-HENVVELLHCK--------ESDQHVYLVMEFCNGGDLADYLVS---KGTLSEDTIRIFLKQI   74 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~-h~~iv~l~~~~--------~~~~~~~lv~e~~~~g~l~~~l~~---~~~~~~~~~~~~~~~~   74 (160)
                      .....+.+|+.+++.+. ||||+++++++        ......++++|++. |++.+++..   .+.+++.....++.++
T Consensus        67 ~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi  145 (337)
T 3ll6_A           67 EKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQT  145 (337)
T ss_dssp             HHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHH
Confidence            44556788999999996 99999999988        34455899999996 576665543   3568889999999999


Q ss_pred             HHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeec
Q psy11428         75 VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGF  154 (160)
Q Consensus        75 ~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~  154 (160)
                      +.++.++|...                               .+++|+||||+||+++.+          ..++|+|||+
T Consensus       146 ~~~l~~LH~~~-------------------------------~~ivH~Dikp~NIl~~~~----------~~~kl~Dfg~  184 (337)
T 3ll6_A          146 CRAVQHMHRQK-------------------------------PPIIHRDLKVENLLLSNQ----------GTIKLCDFGS  184 (337)
T ss_dssp             HHHHHHHHTSS-------------------------------SCCBCCCCCGGGCEECTT----------SCEEBCCCTT
T ss_pred             HHHHHHHHhCC-------------------------------CCEEEccCCcccEEECCC----------CCEEEecCcc
Confidence            99999987530                               028999999999999844          3789999999


Q ss_pred             cccc
Q psy11428        155 ARFL  158 (160)
Q Consensus       155 a~~~  158 (160)
                      ++.+
T Consensus       185 ~~~~  188 (337)
T 3ll6_A          185 ATTI  188 (337)
T ss_dssp             CBCC
T ss_pred             ceec
Confidence            8754

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.54  E-value=7e-15  Score=113.79  Aligned_cols=108  Identities=35%  Similarity=0.517  Sum_probs=87.2

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcE------EEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHV------YLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~------~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (160)
                      +......+.+|+.+++.++||||+++++++...+..      |+++|++. +++...+  ...+++.....++.+++.++
T Consensus        81 ~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~i~~qi~~aL  157 (371)
T 4exu_A           81 SEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIM--GMEFSEEKIQYLVYQMLKGL  157 (371)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECCC-EEHHHHT--TSCCCHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEEEcccc-ccHHHHh--hcCCCHHHHHHHHHHHHHHH
Confidence            344566788999999999999999999999877665      99999997 4555443  23478889999999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .++|..                                 +++|||+||+||+++.+          +.++|+|||+++..
T Consensus       158 ~~LH~~---------------------------------~ivH~Dikp~NIll~~~----------~~~kL~Dfg~a~~~  194 (371)
T 4exu_A          158 KYIHSA---------------------------------GVVHRDLKPGNLAVNED----------CELKILDFGLARHA  194 (371)
T ss_dssp             HHHHHT---------------------------------TCCCSCCCGGGEEECTT----------CCEEECSTTCC---
T ss_pred             HHHHHC---------------------------------CCcCCCcCHHHeEECCC----------CCEEEEecCccccc
Confidence            998853                                 68999999999999854          37999999998643

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.53  E-value=9.2e-15  Score=110.25  Aligned_cols=109  Identities=29%  Similarity=0.516  Sum_probs=92.9

Q ss_pred             chhHHHHHHHHHHHHhhcC--CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          5 SKSSIVLTRHILKELTELH--HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~--h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      +......+++|+++++.++  ||||+++++.+......|+++| +.++++.+++...+.+++.....+..+++.++.++|
T Consensus        66 ~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH  144 (313)
T 3cek_A           66 DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH  144 (313)
T ss_dssp             CHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3445677889999999997  5999999999999999999999 667888888777777888888999999999999987


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|+|+||+||+++.           ..++|+|||+++.+
T Consensus       145 ~~---------------------------------~ivH~dlkp~NIl~~~-----------~~~kL~Dfg~~~~~  176 (313)
T 3cek_A          145 QH---------------------------------GIVHSDLKPANFLIVD-----------GMLKLIDFGIANQM  176 (313)
T ss_dssp             HT---------------------------------TCCCCCCCGGGEEEET-----------TEEEECCCSSSCC-
T ss_pred             HC---------------------------------CceecCCCcccEEEEC-----------CeEEEeeccccccc
Confidence            53                                 6899999999999963           37899999998754

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.53  E-value=6e-15  Score=116.12  Aligned_cols=103  Identities=30%  Similarity=0.411  Sum_probs=80.4

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeecC------CcEEEEEEEeCCCceeEEEe----eecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428         13 RHILKELTELHHENVVELLHCKESD------QHVYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~~------~~~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      .+|+++++.++||||+++++++...      ..+++++||++++ +...+.    ....+++..+..++.+++.++.++|
T Consensus        95 ~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~-l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH  173 (420)
T 1j1b_A           95 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPET-VYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH  173 (420)
T ss_dssp             CHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEEEECCCEE-HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEeehhccccc-HHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence            3689999999999999998877432      2367999999863 322221    2356788889999999999999987


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++||||||+||+++.++         ..+||+|||+++.+
T Consensus       174 ~~---------------------------------~ivHrDlkp~NILl~~~~---------~~~kl~DFG~a~~~  207 (420)
T 1j1b_A          174 SF---------------------------------GICHRDIKPQNLLLDPDT---------AVLKLCDFGSAKQL  207 (420)
T ss_dssp             TT---------------------------------TEECSCCSGGGEEEETTT---------TEEEECCCTTCEEC
T ss_pred             HC---------------------------------CccccCCChhhEEEeCCC---------CeEEeccchhhhhc
Confidence            53                                 689999999999998432         36899999999754

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.53  E-value=8e-15  Score=112.46  Aligned_cols=107  Identities=35%  Similarity=0.501  Sum_probs=87.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCc------EEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQH------VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~------~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ......+.+|+.+++.++||||+++++++.....      .|+++|++. +++...+.  ..+++.....++.+++.++.
T Consensus        64 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~--~~~~~~~~~~i~~qi~~al~  140 (353)
T 3coi_A           64 EIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDLQKIMG--LKFSEEKIQYLVYQMLKGLK  140 (353)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECCS-EEGGGTTT--SCCCHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEecccc-CCHHHHhc--CCCCHHHHHHHHHHHHHHHH
Confidence            3445677899999999999999999999877654      499999997 46655432  34788889999999999999


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|..                                 +++|+|+||+||+++.+          +.++|+|||+++..
T Consensus       141 ~LH~~---------------------------------~ivH~dlkp~NIl~~~~----------~~~kl~Dfg~~~~~  176 (353)
T 3coi_A          141 YIHSA---------------------------------GVVHRDLKPGNLAVNED----------CELKILDFGLARHA  176 (353)
T ss_dssp             HHHHT---------------------------------TCCCSSCCGGGEEECTT----------CCEEECSTTCTTC-
T ss_pred             HHHHC---------------------------------CcccCCCCHHHEeECCC----------CcEEEeecccccCC
Confidence            98753                                 68999999999999854          37999999998753

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.53  E-value=7.1e-15  Score=109.35  Aligned_cols=106  Identities=25%  Similarity=0.421  Sum_probs=80.8

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe----eecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV----SKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ...+.+...++.++||||+++++++..++..|+++|++++ ++..++.    ..+.+++.....+..+++.++.++|.. 
T Consensus        51 ~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-  128 (290)
T 3fme_A           51 RLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK-  128 (290)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc-
Confidence            3344555557889999999999999999999999999975 6544432    235688899999999999999998752 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     .+++|+|+||+||+++.+          ..++|+|||+++..
T Consensus       129 -------------------------------~~i~H~dlkp~Nil~~~~----------~~~kl~Dfg~~~~~  160 (290)
T 3fme_A          129 -------------------------------LSVIHRDVKPSNVLINAL----------GQVKMCDFGISGYL  160 (290)
T ss_dssp             -------------------------------SCCCCCCCSGGGCEECTT----------CCEEBCCC------
T ss_pred             -------------------------------CCeecCCCCHHHEEECCC----------CCEEEeecCCcccc
Confidence                                           158999999999999753          37999999998654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.53  E-value=9.8e-15  Score=111.56  Aligned_cols=104  Identities=26%  Similarity=0.471  Sum_probs=84.7

Q ss_pred             HHHHHhhcCCcceEEEeeeeec----CCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         15 ILKELTELHHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        15 ~~~~l~~l~h~~iv~l~~~~~~----~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ....++.++||||+++++++..    ....++++||+++++|..++...+  .+++.....++.+++.++.++|..    
T Consensus        72 ~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~----  147 (336)
T 3fhr_A           72 VDHHWQASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH----  147 (336)
T ss_dssp             HHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            3344667799999999998875    455899999999999988776543  588999999999999999998853    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|||+||+||+++.++       ....++|+|||+++..
T Consensus       148 -----------------------------~ivH~dlkp~NIll~~~~-------~~~~~kl~Dfg~~~~~  181 (336)
T 3fhr_A          148 -----------------------------NIAHRDVKPENLLYTSKE-------KDAVLKLTDFGFAKET  181 (336)
T ss_dssp             -----------------------------TEECSCCSGGGEEESCSS-------TTCCEEECCCTTCEEC
T ss_pred             -----------------------------CeecCCCCHHHEEEEecC-------CCceEEEeccccceec
Confidence                                         689999999999998532       3456899999998643

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.52  E-value=5.2e-16  Score=117.12  Aligned_cols=105  Identities=25%  Similarity=0.426  Sum_probs=89.0

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|+.+++.++||||+++++++......++++|+++++++..++...+ .+++.....+..+++.++.++|..   
T Consensus        73 ~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---  149 (319)
T 2y4i_B           73 LKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---  149 (319)
T ss_dssp             CCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            3445678889999999999999999999999999999999999988876543 578888999999999999998853   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                                                    +++|+|+||+||+++.           +.++|+|||+++.
T Consensus       150 ------------------------------~i~H~dlkp~NIl~~~-----------~~~~l~Dfg~~~~  178 (319)
T 2y4i_B          150 ------------------------------GILHKDLKSKNVFYDN-----------GKVVITDFGLFSI  178 (319)
T ss_dssp             ------------------------------TCCCCCCCSTTEEEC-------------CCEECCCSCCC-
T ss_pred             ------------------------------CccccCCChhhEEEeC-----------CCEEEeecCCccc
Confidence                                          6899999999999962           2689999998754

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.52  E-value=1.4e-14  Score=109.62  Aligned_cols=118  Identities=26%  Similarity=0.395  Sum_probs=90.8

Q ss_pred             hHHHHHHHHHHHHhhcCCcc------eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHEN------VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~------iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~   78 (160)
                      .....+++|+++++.++|++      ++++++.+...+..|+++|++ ++++.+++...+  .+++.....+..+++.++
T Consensus        53 ~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l  131 (339)
T 1z57_A           53 RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSV  131 (339)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence            34566778888888887765      999999999999999999999 788887766544  567888999999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCC---------CCCCceEEE
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYP---------QPQHIKLKI  149 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~---------~~~~~~~~l  149 (160)
                      .++|..                                 +++|||+||+||+++..+.....         ...+..++|
T Consensus       132 ~~lH~~---------------------------------~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl  178 (339)
T 1z57_A          132 NFLHSN---------------------------------KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV  178 (339)
T ss_dssp             HHHHHT---------------------------------TEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEE
T ss_pred             HHHHHC---------------------------------CCcCCCCCHHHEEEeccccccccCCccccccccccCCCceE
Confidence            998853                                 68999999999999742100000         000346899


Q ss_pred             eeeeccccc
Q psy11428        150 ADFGFARFL  158 (160)
Q Consensus       150 ~dfg~a~~~  158 (160)
                      +|||+++..
T Consensus       179 ~Dfg~~~~~  187 (339)
T 1z57_A          179 VDFGSATYD  187 (339)
T ss_dssp             CCCSSCEET
T ss_pred             eeCcccccC
Confidence            999998753

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.52  E-value=1.4e-14  Score=109.92  Aligned_cols=106  Identities=28%  Similarity=0.446  Sum_probs=90.1

Q ss_pred             HHHHHHHHHhhcC--CcceEEEeeeeecCCcEEEEEEEeCC-CceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         11 LTRHILKELTELH--HENVVELLHCKESDQHVYLVMEFCNG-GDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        11 ~~~~~~~~l~~l~--h~~iv~l~~~~~~~~~~~lv~e~~~~-g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .+..|+.+++.++  |||++++++.+...+..++++|++.+ +++.+++...+.+++.....++.+++.++.++|..   
T Consensus        92 ~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---  168 (320)
T 3a99_A           92 RVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---  168 (320)
T ss_dssp             EEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            3456888888886  59999999999999999999999976 78888776677788999999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.+         ...++|+|||+++.+
T Consensus       169 ------------------------------~ivH~Dlkp~NIll~~~---------~~~~kL~Dfg~~~~~  200 (320)
T 3a99_A          169 ------------------------------GVLHRDIKDENILIDLN---------RGELKLIDFGSGALL  200 (320)
T ss_dssp             ------------------------------TEECCCCSGGGEEEETT---------TTEEEECCCTTCEEC
T ss_pred             ------------------------------CcEeCCCCHHHEEEeCC---------CCCEEEeeCcccccc
Confidence                                          68999999999999832         237999999998754

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.51  E-value=1.7e-14  Score=109.14  Aligned_cols=102  Identities=37%  Similarity=0.613  Sum_probs=81.1

Q ss_pred             HHHHHHHhhcCCcceEEEeeeee-----cCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428         13 RHILKELTELHHENVVELLHCKE-----SDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~-----~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ..+++.++.++||||+++++++.     .....++++|+++ +++..++...  ..+++.....+..+++.++.++|.. 
T Consensus        62 ~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-  139 (326)
T 1blx_A           62 VAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH-  139 (326)
T ss_dssp             HHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHhhhccCCCCeEeeeeeeeecccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC-
Confidence            33344444558999999999886     5677899999998 5877766543  3378888999999999999998753 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|+|+||+||+++.+          +.++|+|||+++..
T Consensus       140 --------------------------------gi~H~dlkp~Nili~~~----------~~~kl~Dfg~~~~~  170 (326)
T 1blx_A          140 --------------------------------RVVHRDLKPQNILVTSS----------GQIKLADFGLARIY  170 (326)
T ss_dssp             --------------------------------TCCCCCCCGGGEEECTT----------CCEEECSCCSCCCC
T ss_pred             --------------------------------CceeccCCHHHeEEcCC----------CCEEEecCcccccc
Confidence                                            68999999999999754          37899999998653

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.50  E-value=9.3e-15  Score=112.94  Aligned_cols=107  Identities=15%  Similarity=0.143  Sum_probs=70.0

Q ss_pred             hHHHHHHHH---HHHHhhcCCcceEEEe-------eeeecC-----------------CcEEEEEEEeCCCceeEEEeee
Q psy11428          7 SSIVLTRHI---LKELTELHHENVVELL-------HCKESD-----------------QHVYLVMEFCNGGDLADYLVSK   59 (160)
Q Consensus         7 ~~~~~~~~~---~~~l~~l~h~~iv~l~-------~~~~~~-----------------~~~~lv~e~~~~g~l~~~l~~~   59 (160)
                      .....++.|   ++.|+. +|||+++++       +++...                 ...|+||||++ ++|.+++...
T Consensus       104 ~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~  181 (371)
T 3q60_A          104 SELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL  181 (371)
T ss_dssp             HHHHHHHHHHHHHHHHHC-----------CBCCCCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh
Confidence            344555666   455555 799988755       344332                 33899999998 8998887653


Q ss_pred             c-CCCHHHH------HHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeee
Q psy11428         60 G-TLSEDTI------RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS  132 (160)
Q Consensus        60 ~-~~~~~~~------~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~  132 (160)
                      + ..+....      ..+..+++.++.++|..                                 +++||||||+||+++
T Consensus       182 ~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---------------------------------~ivHrDikp~NIll~  228 (371)
T 3q60_A          182 DFVYVFRGDEGILALHILTAQLIRLAANLQSK---------------------------------GLVHGHFTPDNLFIM  228 (371)
T ss_dssp             HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---------------------------------TEEETTCSGGGEEEC
T ss_pred             ccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---------------------------------CCccCcCCHHHEEEC
Confidence            2 3344444      45668999999998853                                 689999999999998


Q ss_pred             cCCCCCCCCCCCceEEEeeeeccccc
Q psy11428        133 HSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus       133 ~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .+          +.+||+|||+++..
T Consensus       229 ~~----------~~~kL~DFG~a~~~  244 (371)
T 3q60_A          229 PD----------GRLMLGDVSALWKV  244 (371)
T ss_dssp             TT----------SCEEECCGGGEEET
T ss_pred             CC----------CCEEEEecceeeec
Confidence            54          37999999999754

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.50  E-value=1.4e-14  Score=114.53  Aligned_cols=116  Identities=34%  Similarity=0.525  Sum_probs=84.9

Q ss_pred             HHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCC-------HHHHHHHHHHHHHHHHH
Q psy11428          9 IVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLS-------EDTIRIFLKQIVQALKA   80 (160)
Q Consensus         9 ~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~   80 (160)
                      ...+.+|+++++.+ +||||+++++++.++...|+++|+++ |+|.+++...+...       +.....++.+++.++.+
T Consensus        52 ~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~  130 (434)
T 2rio_A           52 CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAH  130 (434)
T ss_dssp             HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHH
Confidence            34567899999876 89999999999999999999999996 58877665433221       22335578899999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCC---CCCCCCCCceEEEeeeecccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFG---KQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~---~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +|..                                 +++||||||+||+++.++.   .....+.+..++|+|||+++.
T Consensus       131 LH~~---------------------------------~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~  177 (434)
T 2rio_A          131 LHSL---------------------------------KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK  177 (434)
T ss_dssp             HHHT---------------------------------TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEE
T ss_pred             HHHC---------------------------------CccccCCChHhEEEecCcccccccccCCCceEEEEccccccee
Confidence            8753                                 6899999999999975310   000012345899999999875


Q ss_pred             c
Q psy11428        158 L  158 (160)
Q Consensus       158 ~  158 (160)
                      +
T Consensus       178 ~  178 (434)
T 2rio_A          178 L  178 (434)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.49  E-value=4.1e-14  Score=111.67  Aligned_cols=107  Identities=28%  Similarity=0.428  Sum_probs=85.5

Q ss_pred             HHHHHHHHHHhhc------CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHh
Q psy11428         10 VLTRHILKELTEL------HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus        10 ~~~~~~~~~l~~l------~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      ..+..|+++++.+      +|+||+++++.+.....+|+++|+++ +++..++....  .+++..+..++.+++.++.++
T Consensus       138 ~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~L  216 (429)
T 3kvw_A          138 RQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL  216 (429)
T ss_dssp             HHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHH
Confidence            4455666666665      67799999999999999999999996 57766654432  378888999999999999998


Q ss_pred             hhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         82 QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      |..                                 +++||||||+||+++.++        ...+||+|||+++..
T Consensus       217 H~~---------------------------------~ivHrDlKp~NILl~~~~--------~~~vkL~DFG~a~~~  252 (429)
T 3kvw_A          217 HKN---------------------------------RIIHCDLKPENILLKQQG--------RSGIKVIDFGSSCYE  252 (429)
T ss_dssp             HHH---------------------------------TEECSCCSGGGEEESSTT--------SCCEEECCCTTCEET
T ss_pred             HHC---------------------------------CeecCCCCHHHeEEccCC--------CcceEEeecccceec
Confidence            863                                 689999999999998543        224899999998643

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.49  E-value=3.4e-14  Score=107.72  Aligned_cols=105  Identities=23%  Similarity=0.377  Sum_probs=83.2

Q ss_pred             HHHHHHH-HHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-----ecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428         11 LTRHILK-ELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-----KGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus        11 ~~~~~~~-~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ....|.. +++.++||||+++++++...+..++++|++++ ++..++..     ...+++.....+..+++.++.++|..
T Consensus        66 ~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~  144 (327)
T 3aln_A           66 QLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN  144 (327)
T ss_dssp             HHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc
Confidence            3444444 67788999999999999999999999999986 55444331     35678888888999999999988752


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      .+++|+|+||+||+++.+          +.++|+|||+++.+
T Consensus       145 --------------------------------~~ivH~dlkp~NIll~~~----------~~~kl~Dfg~~~~~  176 (327)
T 3aln_A          145 --------------------------------LKIIHRDIKPSNILLDRS----------GNIKLCDFGISGQL  176 (327)
T ss_dssp             --------------------------------HSCCCSCCCGGGEEEETT----------TEEEECCCSSSCC-
T ss_pred             --------------------------------CCEeECCCCHHHEEEcCC----------CCEEEccCCCceec
Confidence                                            158999999999999854          38999999998654

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.46  E-value=7.5e-14  Score=103.96  Aligned_cols=107  Identities=22%  Similarity=0.339  Sum_probs=85.5

Q ss_pred             HHHHHHHHHhhcCCcceEEEee-eeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         11 LTRHILKELTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~-~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      .+..|.++++.++|++++..+. ++......++++|++ ++++.+++.. .+.+++.....+..+++.++.++|..    
T Consensus        50 ~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~----  124 (296)
T 4hgt_A           50 QLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK----  124 (296)
T ss_dssp             CHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            4677888999998887776554 556778889999999 8898877653 34688899999999999999998853    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|||+||+||+++.+       +....++|+|||+++.+
T Consensus       125 -----------------------------~ivH~Dlkp~NIl~~~~-------~~~~~~kL~Dfg~a~~~  158 (296)
T 4hgt_A          125 -----------------------------NFIHRDVKPDNFLMGLG-------KKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             -----------------------------TEECSCCSGGGEEECCG-------GGTTCEEECCCTTCEEC
T ss_pred             -----------------------------CeecCCCCHHHeeeecc-------CCCCeEEEecCccceec
Confidence                                         68999999999999421       12347999999998754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.45  E-value=9.2e-14  Score=105.88  Aligned_cols=118  Identities=22%  Similarity=0.337  Sum_probs=88.0

Q ss_pred             hHHHHHHHHHHHHhhcCCcc------eEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELHHEN------VVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~------iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~   78 (160)
                      .....++.|+++++.++|++      ++.+.+.+...+..|+++|++ ++++..++...  ..+++..+..++.+++.++
T Consensus        58 ~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L  136 (355)
T 2eu9_A           58 KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL  136 (355)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHH
Confidence            34456778888888887776      889999999999999999999 55555554433  3578888999999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCC---------CCCCCCCceEEE
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK---------QYPQPQHIKLKI  149 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~---------~~~~~~~~~~~l  149 (160)
                      .++|..                                 +++||||||+||+++..+..         ....+....++|
T Consensus       137 ~~lH~~---------------------------------~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl  183 (355)
T 2eu9_A          137 RFLHEN---------------------------------QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRV  183 (355)
T ss_dssp             HHHHTT---------------------------------TEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEE
T ss_pred             HHHHHC---------------------------------CcccCCCCHHHEEEecccccccccccccccccccCCCcEEE
Confidence            998753                                 68999999999999432100         000013457899


Q ss_pred             eeeeccccc
Q psy11428        150 ADFGFARFL  158 (160)
Q Consensus       150 ~dfg~a~~~  158 (160)
                      +|||+++..
T Consensus       184 ~Dfg~~~~~  192 (355)
T 2eu9_A          184 ADFGSATFD  192 (355)
T ss_dssp             CCCTTCEET
T ss_pred             eecCccccc
Confidence            999998743

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.44  E-value=6e-14  Score=108.53  Aligned_cols=95  Identities=28%  Similarity=0.470  Sum_probs=74.7

Q ss_pred             hHHHHHHHHHHHHhhcC--------CcceEEEeeeee----cCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHH
Q psy11428          7 SSIVLTRHILKELTELH--------HENVVELLHCKE----SDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLK   72 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~--------h~~iv~l~~~~~----~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~   72 (160)
                      .....+.+|+++++.++        ||||+++++.+.    .....|+++|++ ++++...+...  +.+++..+..++.
T Consensus        75 ~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~  153 (397)
T 1wak_A           75 HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQ  153 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHH
Confidence            34556778888888885        888999999887    556899999999 45554444332  4588899999999


Q ss_pred             HHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecC
Q psy11428         73 QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS  134 (160)
Q Consensus        73 ~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~  134 (160)
                      +++.++.++|..                                .+++||||||+||+++.+
T Consensus       154 qi~~aL~~lH~~--------------------------------~givHrDikp~NIll~~~  183 (397)
T 1wak_A          154 QVLQGLDYLHTK--------------------------------CRIIHTDIKPENILLSVN  183 (397)
T ss_dssp             HHHHHHHHHHHT--------------------------------TCEECCCCSGGGEEECCC
T ss_pred             HHHHHHHHHHHh--------------------------------CCEecCCCCHHHeeEecc
Confidence            999999998752                                158999999999999743

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.44  E-value=1e-13  Score=104.39  Aligned_cols=106  Identities=25%  Similarity=0.377  Sum_probs=81.0

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+.+..+++.++||||+++++++..++..|+++|++ ++.+...... .+.+++.....+..+++.++.++|..    
T Consensus        69 ~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~----  143 (318)
T 2dyl_A           69 RILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK----  143 (318)
T ss_dssp             HHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH----
T ss_pred             HHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh----
Confidence            33444555678889999999999999999999999999 3333322211 35678888889999999999988752    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  .+++|+|+||+||+++.+          ..++|+|||+++.+
T Consensus       144 ----------------------------~~i~H~dlkp~Nil~~~~----------~~~kl~dfg~~~~~  175 (318)
T 2dyl_A          144 ----------------------------HGVIHRDVKPSNILLDER----------GQIKLCDFGISGRL  175 (318)
T ss_dssp             ----------------------------HCCCCCCCCGGGEEECTT----------SCEEECCCTTC---
T ss_pred             ----------------------------CCEEeCCCCHHHEEECCC----------CCEEEEECCCchhc
Confidence                                        158999999999999754          37999999998643

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.44  E-value=1.9e-13  Score=101.90  Aligned_cols=107  Identities=22%  Similarity=0.339  Sum_probs=85.5

Q ss_pred             HHHHHHHHHhhcCCcceEEEee-eeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         11 LTRHILKELTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~-~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      .+.+|+++++.++|++++..+. +.......++++|++ ++++.+++.. .+.+++.....+..+++.++.++|..    
T Consensus        50 ~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~----  124 (296)
T 3uzp_A           50 QLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK----  124 (296)
T ss_dssp             HHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC----
Confidence            4678899999999887665544 556778889999999 8898887652 35688899999999999999998853    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|+|+||+||+++.+       +.+..++|+|||+++.+
T Consensus       125 -----------------------------~ivH~dlkp~NIl~~~~-------~~~~~~kl~Dfg~~~~~  158 (296)
T 3uzp_A          125 -----------------------------NFIHRDVKPDNFLMGLG-------KKGNLVYIIDFGLAKKY  158 (296)
T ss_dssp             -----------------------------TEECSCCCGGGEEECCG-------GGTTCEEECCCTTCEEC
T ss_pred             -----------------------------CeeeCCCCHHHeEEecC-------CCCCeEEEeeCCCcccc
Confidence                                         68999999999999521       12347899999998754

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.42  E-value=2.2e-13  Score=105.66  Aligned_cols=111  Identities=31%  Similarity=0.397  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHhhcC-Cc-----ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELH-HE-----NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALK   79 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~-h~-----~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~   79 (160)
                      ....+..|+++++.++ |+     +++++.+.+......|+|+|++++ ++.+++...  +.+++.....+..+++.++.
T Consensus        93 ~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~  171 (382)
T 2vx3_A           93 FLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALL  171 (382)
T ss_dssp             HHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHH
Confidence            3455667777777764 44     499999999999999999999965 887766543  34788888999999999998


Q ss_pred             HhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         80 AFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        80 ~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ++|...                               .+++||||||+||+++.+        .+..+||+|||+++..
T Consensus       172 ~lH~~~-------------------------------~~ivHrDlkp~NIll~~~--------~~~~~kL~DFG~a~~~  211 (382)
T 2vx3_A          172 FLATPE-------------------------------LSIIHCDLKPENILLCNP--------KRSAIKIVDFGSSCQL  211 (382)
T ss_dssp             HHTSTT-------------------------------TCEECCCCSGGGEEESST--------TSCCEEECCCTTCEET
T ss_pred             HhccCC-------------------------------CCEEcCCCCcccEEEecC--------CCCcEEEEeccCceec
Confidence            876311                               268999999999999632        2347899999999754

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.42  E-value=2.3e-13  Score=109.13  Aligned_cols=106  Identities=24%  Similarity=0.312  Sum_probs=84.5

Q ss_pred             HHHHHHHHhhcCCc-ceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         12 TRHILKELTELHHE-NVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        12 ~~~~~~~l~~l~h~-~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      +..|.++++.++|+ ++..+...+......+++|||+ +++|.+++.. .+.+++..+..++.+++.++.++|..     
T Consensus        49 ~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~-----  122 (483)
T 3sv0_A           49 LLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK-----  122 (483)
T ss_dssp             HHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC-----
Confidence            56788888888774 5555666667788899999999 8898887653 45688999999999999999998853     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++||||||+||+++..       +....++|+|||+++.+
T Consensus       123 ----------------------------gIvHrDIKP~NILl~~~-------~~~~~vkL~DFGla~~~  156 (483)
T 3sv0_A          123 ----------------------------SFLHRDIKPDNFLMGLG-------RRANQVYIIDFGLAKKY  156 (483)
T ss_dssp             ----------------------------TEECCCCCGGGEEECCG-------GGTTCEEECCCTTCEEC
T ss_pred             ----------------------------CEeecccCcceEEEecC-------CCCCeEEEEeCCcceec
Confidence                                        68999999999999521       13347999999999754

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.40  E-value=2.3e-13  Score=101.98  Aligned_cols=97  Identities=22%  Similarity=0.276  Sum_probs=74.6

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++  | +++.+++.. +..|++|||++|++|.. +..      .....+..+++.++.++|..   
T Consensus       147 ~~~~~~~E~~~l~~l~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~------~~~~~i~~qi~~~l~~lH~~---  212 (282)
T 1zar_A          147 AIRSARNEFRALQKLQ--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV------ENPDEVLDMILEEVAKFYHR---  212 (282)
T ss_dssp             HHHHHHHHHHHHHHTT--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC------SCHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhcc--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch------hhHHHHHHHHHHHHHHHHHC---
Confidence            4567889999999998  4 555554433 56699999999999987 321      22345778899999888753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                    +++|||+||+||+++ ++          .++|+|||+++...
T Consensus       213 ------------------------------giiHrDlkp~NILl~-~~----------~vkl~DFG~a~~~~  243 (282)
T 1zar_A          213 ------------------------------GIVHGDLSQYNVLVS-EE----------GIWIIDFPQSVEVG  243 (282)
T ss_dssp             ------------------------------TEECSCCSTTSEEEE-TT----------EEEECCCTTCEETT
T ss_pred             ------------------------------CCEeCCCCHHHEEEE-CC----------cEEEEECCCCeECC
Confidence                                          689999999999998 43          79999999997653

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.39  E-value=1.2e-13  Score=106.20  Aligned_cols=114  Identities=24%  Similarity=0.368  Sum_probs=87.9

Q ss_pred             HHHHHHHHHHHHhhcC-----------CcceEEEeeeeecCC----cEEEEEEEeCCCceeEEEee--ecCCCHHHHHHH
Q psy11428          8 SIVLTRHILKELTELH-----------HENVVELLHCKESDQ----HVYLVMEFCNGGDLADYLVS--KGTLSEDTIRIF   70 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~-----------h~~iv~l~~~~~~~~----~~~lv~e~~~~g~l~~~l~~--~~~~~~~~~~~~   70 (160)
                      ....+.+|+++++.++           ||||+++++.+...+    ..++++|++ ++++..++..  .+.++...+..+
T Consensus        58 ~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i  136 (373)
T 1q8y_A           58 YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQI  136 (373)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHH
T ss_pred             chhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHH
Confidence            3455677888887776           899999999887554    789999999 7888777654  244788889999


Q ss_pred             HHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEe
Q psy11428         71 LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIA  150 (160)
Q Consensus        71 ~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~  150 (160)
                      +.+++.++.++|..                                .+++||||||+||+++.++.    .+....++|+
T Consensus       137 ~~qi~~aL~~lH~~--------------------------------~~ivH~Dikp~NIll~~~~~----~~~~~~~kl~  180 (373)
T 1q8y_A          137 SKQLLLGLDYMHRR--------------------------------CGIIHTDIKPENVLMEIVDS----PENLIQIKIA  180 (373)
T ss_dssp             HHHHHHHHHHHHHT--------------------------------TCEECSCCSGGGEEEEEEET----TTTEEEEEEC
T ss_pred             HHHHHHHHHHHHhc--------------------------------CCEEecCCChHHeEEeccCC----CcCcceEEEc
Confidence            99999999998752                                15899999999999974321    1234578999


Q ss_pred             eeeccccc
Q psy11428        151 DFGFARFL  158 (160)
Q Consensus       151 dfg~a~~~  158 (160)
                      |||+++..
T Consensus       181 Dfg~a~~~  188 (373)
T 1q8y_A          181 DLGNACWY  188 (373)
T ss_dssp             CCTTCEET
T ss_pred             cccccccc
Confidence            99998754

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.10  E-value=4e-11  Score=88.50  Aligned_cols=101  Identities=25%  Similarity=0.296  Sum_probs=68.8

Q ss_pred             HHHHHHHHHHhhcCCcce--EEEeeeeecCCcEEEEEEEeCC-CceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhh-hh
Q psy11428         10 VLTRHILKELTELHHENV--VELLHCKESDQHVYLVMEFCNG-GDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQ-VK   84 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~i--v~l~~~~~~~~~~~lv~e~~~~-g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~   84 (160)
                      ..+.+|.+.|+.++|+++  ...+..    ...++||||+++ |.....+... ...++.....+..+++.++.++| ..
T Consensus       115 ~~~~~E~~~l~~l~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~  190 (258)
T 1zth_A          115 IWTEKEFRNLERAKEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEA  190 (258)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHC
Confidence            357789999999988764  223332    357899999953 4332222111 11223356677788889988876 32


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                       +++|||+||.||+++          .  .++|+|||+|....
T Consensus       191 ---------------------------------givHrDlkp~NILl~----------~--~~~liDFG~a~~~~  220 (258)
T 1zth_A          191 ---------------------------------ELVHADLSEYNIMYI----------D--KVYFIDMGQAVTLR  220 (258)
T ss_dssp             ---------------------------------CEECSSCSTTSEEES----------S--SEEECCCTTCEETT
T ss_pred             ---------------------------------CEEeCCCCHHHEEEc----------C--cEEEEECcccccCC
Confidence                                             689999999999996          2  58999999997543

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=98.99  E-value=1.3e-10  Score=91.21  Aligned_cols=76  Identities=14%  Similarity=0.184  Sum_probs=55.5

Q ss_pred             cEEEEEEEeCCCceeEEEee-------ecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEec
Q psy11428         39 HVYLVMEFCNGGDLADYLVS-------KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFC  111 (160)
Q Consensus        39 ~~~lv~e~~~~g~l~~~l~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~  111 (160)
                      ..+++++.. ++++.+++..       .+.+++.....+..+++.++.++|..                           
T Consensus       179 ~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---------------------------  230 (413)
T 3dzo_A          179 SRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---------------------------  230 (413)
T ss_dssp             SEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---------------------------
T ss_pred             ceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---------------------------
Confidence            356666644 5666665421       22345666777778999999998753                           


Q ss_pred             CCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428        112 NGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus       112 ~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                            +++||||||+||+++.++          .+||+|||+++..
T Consensus       231 ------~iiHrDiKp~NILl~~~~----------~~kL~DFG~a~~~  261 (413)
T 3dzo_A          231 ------GLVHTYLRPVDIVLDQRG----------GVFLTGFEHLVRD  261 (413)
T ss_dssp             ------TEECSCCCGGGEEECTTC----------CEEECCGGGCEET
T ss_pred             ------CcccCCcccceEEEecCC----------eEEEEeccceeec
Confidence                  689999999999998543          6999999998653

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=98.55  E-value=1.1e-07  Score=74.33  Aligned_cols=104  Identities=12%  Similarity=0.119  Sum_probs=62.4

Q ss_pred             HHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCce
Q psy11428         12 TRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENV   91 (160)
Q Consensus        12 ~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~ni   91 (160)
                      +..|.+.|.++.++++.. ...+.. ...++||||++|+.+.....    .+  ....+..+++.++..+|..       
T Consensus       160 A~kE~~nL~rL~~~gv~v-p~p~~~-~~~~LVME~i~G~~L~~l~~----~~--~~~~l~~qll~~l~~lH~~-------  224 (397)
T 4gyi_A          160 AIKEFAFMKALYEEGFPV-PEPIAQ-SRHTIVMSLVDALPMRQVSS----VP--DPASLYADLIALILRLAKH-------  224 (397)
T ss_dssp             HHHHHHHHHHHHHTTCSC-CCEEEE-ETTEEEEECCSCEEGGGCCC----CS--CHHHHHHHHHHHHHHHHHT-------
T ss_pred             HHHHHHHHHHHHhcCCCC-Ceeeec-cCceEEEEecCCccHhhhcc----cH--HHHHHHHHHHHHHHHHHHC-------
Confidence            345666666665444321 111111 22479999999877754321    11  2344567888888877642       


Q ss_pred             eEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428         92 VELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus        92 v~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                                                +++|||+||.|||++.++-..-+.+....+.++||+.+.
T Consensus       225 --------------------------gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          225 --------------------------GLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV  263 (397)
T ss_dssp             --------------------------TEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred             --------------------------CCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence                                      689999999999998653111011112247899998764

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=98.50  E-value=4.3e-07  Score=69.95  Aligned_cols=79  Identities=23%  Similarity=0.383  Sum_probs=58.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+..............+.. .+..+     .++.|||||++++.+++.+.+|++||||.||+|.
T Consensus        38 g~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~-E~~il-----~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg~L~  111 (350)
T 4b9d_A           38 GKAILVKSTEDGRQYVIKEINISRMSSKEREESRR-EVAVL-----ANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLF  111 (350)
T ss_dssp             -CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHH-HHHHH-----HHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred             eEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHH-HHHHH-----HHCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence            67899988777777887776655555444333322 22222     3578999999999999999999999999999998


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++..
T Consensus       112 ~~i~~  116 (350)
T 4b9d_A          112 KRINA  116 (350)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87753

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=98.40  E-value=2.6e-07  Score=70.06  Aligned_cols=89  Identities=17%  Similarity=0.280  Sum_probs=59.3

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +.+.+|.- .-+.+|++.+...+..++.++..+..+......   ..+..+...+  .++.|||||++++++++.+.+|+
T Consensus        36 i~~~lG~G-~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~---~~~~~E~~il--~~l~HpnIv~l~~~~~~~~~~yi  109 (311)
T 4aw0_A           36 FGKILGEG-SFSTVVLARELATSREYAIKILEKRHIIKENKV---PYVTRERDVM--SRLDHPFFVKLYFTFQDDEKLYF  109 (311)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCH---HHHHHHHHHH--TTCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEecc-cCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHH---HHHHHHHHHH--HhCCCCCCCeEEEEEEeCCEEEE
Confidence            44455432 336789998888777777776654322111111   1112222222  35889999999999999999999


Q ss_pred             EEEecCCCCccccee
Q psy11428        107 VMEFCNGGDLARIVH  121 (160)
Q Consensus       107 ~~ey~~~~~l~~iih  121 (160)
                      +||||.||+|...+.
T Consensus       110 vmEy~~gG~L~~~i~  124 (311)
T 4aw0_A          110 GLSYAKNGELLKYIR  124 (311)
T ss_dssp             EECCCTTEEHHHHHH
T ss_pred             EEecCCCCCHHHHHH
Confidence            999999999976654

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=98.21  E-value=3.2e-06  Score=61.73  Aligned_cols=68  Identities=15%  Similarity=0.148  Sum_probs=45.3

Q ss_pred             HHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428         11 LTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus        11 ~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ..+.|.+.++.+. +.++.++++.....+..|++||+++|.++.....     +.........++.+.+..+|.
T Consensus        55 ~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           55 DVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             CHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHHhC
Confidence            4667777777774 5677888888888889999999999988764321     111122344555566666653

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=98.19  E-value=2.4e-06  Score=63.69  Aligned_cols=91  Identities=20%  Similarity=0.322  Sum_probs=56.6

Q ss_pred             CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC
Q psy11428         23 HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ  102 (160)
Q Consensus        23 ~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~  102 (160)
                      ..=.+.+.+|.- .-+.+|++.+...+..++.+...+...........+...+..+     ..+.|||||++++.+++.+
T Consensus        13 g~Y~i~~~lG~G-~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il-----~~l~HpnIv~~~~~~~~~~   86 (275)
T 3hyh_A           13 GNYQIVKTLGEG-SFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-----RLLRHPHIIKLYDVIKSKD   86 (275)
T ss_dssp             -CCEEEEEEEC----CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHH-----HHCCCTTBCCEEEEEECSS
T ss_pred             eCeEEEEEEecC-cCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHH-----HHCCCCCCCeEEEEEEECC
Confidence            333455555533 2267899988777777887766554443332222222222332     3578999999999999999


Q ss_pred             eeEEEEEecCCCCcccce
Q psy11428        103 HVYLVMEFCNGGDLARIV  120 (160)
Q Consensus       103 ~~~~~~ey~~~~~l~~ii  120 (160)
                      .++++|||| +|++...+
T Consensus        87 ~~~ivmEy~-~g~L~~~l  103 (275)
T 3hyh_A           87 EIIMVIEYA-GNELFDYI  103 (275)
T ss_dssp             EEEEEEECC-CEEHHHHH
T ss_pred             EEEEEEeCC-CCCHHHHH
Confidence            999999999 56775554

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=98.15  E-value=4.1e-06  Score=62.81  Aligned_cols=79  Identities=24%  Similarity=0.321  Sum_probs=53.4

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec----CCeeEEEEEecCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES----DQHVYLVMEFCNG  113 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~----~~~~~~~~ey~~~  113 (160)
                      +.+|++.+...+..++.+..............+.. .+..+     .++.|||||++++++++    ...++++||||.|
T Consensus        40 g~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~-E~~il-----~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy~~g  113 (290)
T 3fpq_A           40 KTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKE-EAEML-----KGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTS  113 (290)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHH-HHHHH-----HTCCCTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred             cEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHH-HHHHH-----HhCCCCCCCcEEEEEeeccCCCcEEEEEEeCCCC
Confidence            56888887666666776655444444444333322 22222     35889999999998865    4568999999999


Q ss_pred             CCcccceec
Q psy11428        114 GDLARIVHR  122 (160)
Q Consensus       114 ~~l~~iih~  122 (160)
                      |+|..++.+
T Consensus       114 g~L~~~l~~  122 (290)
T 3fpq_A          114 GTLKTYLKR  122 (290)
T ss_dssp             CBHHHHHHH
T ss_pred             CCHHHHHHh
Confidence            999766543

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=98.13  E-value=2.2e-06  Score=65.84  Aligned_cols=77  Identities=26%  Similarity=0.344  Sum_probs=55.0

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...|..++.+...........   .+...+..+     ..+.|||||++++++++.+.+|++||||.||+|.
T Consensus        88 G~V~~a~~~~tg~~vAiK~i~~~~~~~~~---~~~~Ei~il-----~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~  159 (346)
T 4fih_A           88 GIVCIATVRSSGKLVAVKKMDLRKQQRRE---LLFNEVVIM-----RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  159 (346)
T ss_dssp             CEEEEEEETTTCCEEEEEEEEGGGCSSGG---GGHHHHHHH-----HHCCCTTBCCEEEEEEETTEEEEEECCCTTEEHH
T ss_pred             eEEEEEEECCCCCEEEEEEEecCchhHHH---HHHHHHHHH-----HhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence            67899988777777777765433222111   111222222     3578999999999999999999999999999997


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++.+
T Consensus       160 ~~l~~  164 (346)
T 4fih_A          160 DIVTH  164 (346)
T ss_dssp             HHHHH
T ss_pred             HHHHc
Confidence            76644

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=98.12  E-value=4.1e-06  Score=65.99  Aligned_cols=76  Identities=26%  Similarity=0.346  Sum_probs=54.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...|..++.+...........   .+...+..+     ..+.|||||++++++++.+.+|++||||.||+|.
T Consensus       165 G~V~~a~~~~tg~~vAiK~i~~~~~~~~~---~~~~Ei~il-----~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~L~  236 (423)
T 4fie_A          165 GIVCIATVRSSGKLVAVKKMDLRKQQRRE---LLFNEVVIM-----RDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT  236 (423)
T ss_dssp             CEEEEEEETTTCCEEEEEEEESTTCSSGG---GHHHHHHHH-----HHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHH
T ss_pred             cEEEEEEECCCCCEEEEEEEeccchhHHH---HHHHHHHHH-----HhCCCCCCCceEEEEEECCEEEEEEeCCCCCcHH
Confidence            67899998877777777765433222111   111222222     3578999999999999999999999999999997


Q ss_pred             ccee
Q psy11428        118 RIVH  121 (160)
Q Consensus       118 ~iih  121 (160)
                      .++.
T Consensus       237 ~~i~  240 (423)
T 4fie_A          237 DIVT  240 (423)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            6654

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=98.11  E-value=2.2e-06  Score=65.67  Aligned_cols=72  Identities=21%  Similarity=0.238  Sum_probs=52.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...|..++.+..........           ++..  ...+.|||||++++.+++.+.+|++||||.||+|.
T Consensus        72 G~Vy~a~~~~~g~~vAiK~i~~~~~~~~-----------E~~i--l~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L~  138 (336)
T 4g3f_A           72 GEVHRMKDKQTGFQCAVKKVRLEVFRVE-----------ELVA--CAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLG  138 (336)
T ss_dssp             EEEEEEEETTTCCEEEEEEEETTTCCTH-----------HHHT--TTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBHH
T ss_pred             eEEEEEEECCCCCEEEEEEECHHHhHHH-----------HHHH--HHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHH
Confidence            5678887777676777666544332211           1111  24589999999999999999999999999999997


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++.+
T Consensus       139 ~~l~~  143 (336)
T 4g3f_A          139 QLIKQ  143 (336)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76643

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=98.06  E-value=9.8e-06  Score=58.60  Aligned_cols=43  Identities=16%  Similarity=0.154  Sum_probs=31.8

Q ss_pred             HHHHHHHHHhhcCCcc--eEEEeeeeecCCcEEEEEEEeCCCcee
Q psy11428         11 LTRHILKELTELHHEN--VVELLHCKESDQHVYLVMEFCNGGDLA   53 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~--iv~l~~~~~~~~~~~lv~e~~~~g~l~   53 (160)
                      ....|.+.++.+.+.+  +.++++....++..+++||+++|.++.
T Consensus        59 ~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~  103 (264)
T 1nd4_A           59 ELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL  103 (264)
T ss_dssp             CHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             hhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence            3456777777775433  556788777777899999999998774

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=98.01  E-value=5.5e-06  Score=68.78  Aligned_cols=96  Identities=15%  Similarity=0.082  Sum_probs=61.5

Q ss_pred             CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCe
Q psy11428         24 HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQH  103 (160)
Q Consensus        24 h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~  103 (160)
                      .-.+.+.+|.. .-+.+|++.+..+|..++.++..+..+...............+..  ...+.|||||++++++++.+.
T Consensus       190 df~i~k~LG~G-~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~l--l~~~~HP~IV~l~~~f~~~~~  266 (689)
T 3v5w_A          190 DFSVHRIIGRG-GFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL--VSTGDCPFIVCMSYAFHTPDK  266 (689)
T ss_dssp             GEEEEEEEEEC-SSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHH--HSSSCCTTBCCEEEEEECSSE
T ss_pred             HeEEEEEEecc-cCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHH--HhhCCCCCEeEEEEEEEECCE
Confidence            33555666533 236789999887777777776654322111111111111111221  135789999999999999999


Q ss_pred             eEEEEEecCCCCcccceec
Q psy11428        104 VYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus       104 ~~~~~ey~~~~~l~~iih~  122 (160)
                      +|++||||.||+|...+.+
T Consensus       267 lylVmEy~~GGdL~~~l~~  285 (689)
T 3v5w_A          267 LSFILDLMNGGDLHYHLSQ  285 (689)
T ss_dssp             EEEEECCCCSCBHHHHHHH
T ss_pred             EEEEEecCCCCcHHHHHHh
Confidence            9999999999999766543

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=97.95  E-value=5.1e-05  Score=57.93  Aligned_cols=72  Identities=15%  Similarity=0.207  Sum_probs=47.4

Q ss_pred             HHHHHHHHHHhhcC--CcceEEEeeeeecC---CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428         10 VLTRHILKELTELH--HENVVELLHCKESD---QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus        10 ~~~~~~~~~l~~l~--h~~iv~l~~~~~~~---~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      .....|.++++.+.  +.++.+++..+.+.   +..|++||+++|..+....  ...++......+..++...+..+|.
T Consensus        81 ~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~v~G~~l~~~~--~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A           81 HAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEFVSGRVLWDQS--LPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             -CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEECCCCBCCCCTT--CTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEecCCeecCCCc--cccCCHHHHHHHHHHHHHHHHHHhC
Confidence            35566777777776  44577777777665   4589999999997775311  1234455556666777777777764

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=97.87  E-value=6e-05  Score=56.60  Aligned_cols=89  Identities=15%  Similarity=0.187  Sum_probs=56.7

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC----
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ----  102 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~----  102 (160)
                      +++.+|.- .-+.+|++.+...+..++.+...... .+.....+    ..++..+  .++.|||||++++.+...+    
T Consensus         9 ~~~~lG~G-~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~----~~E~~il--~~l~HpnIV~~~~~~~~~~~~~~   80 (299)
T 4g31_A            9 PIQCLGRG-GFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKV----MREVKAL--AKLEHPGIVRYFNAWLEKNTTEK   80 (299)
T ss_dssp             EEEEEEEC-C--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHH----HHHHHHH--TTCCCTTBCCEEEEEEEEC----
T ss_pred             EeeEEecC-CCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHH----HHHHHHH--HhCCCCCCCeEEEEEEecCcccc
Confidence            45555533 22678999887777777776554332 22222222    2222222  3588999999999886544    


Q ss_pred             --------eeEEEEEecCCCCcccceecC
Q psy11428        103 --------HVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus       103 --------~~~~~~ey~~~~~l~~iih~d  123 (160)
                              .+|++||||.||+|..++.+.
T Consensus        81 ~~~~~~~~~l~ivmE~~~gg~L~~~l~~~  109 (299)
T 4g31_A           81 LQPSSPKVYLYIQMQLCRKENLKDWMNGR  109 (299)
T ss_dssp             ------CEEEEEEEECCCSCCHHHHHHTC
T ss_pred             ccccCCCcEEEEEEecCCCCcHHHHHHhc
Confidence                    379999999999998777543

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=97.84  E-value=4.4e-05  Score=57.40  Aligned_cols=39  Identities=23%  Similarity=0.491  Sum_probs=35.9

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+++|||||++++.+.+.+.++++||||.+|+|..+++.
T Consensus        70 ~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~  108 (299)
T 4asz_A           70 TNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRA  108 (299)
T ss_dssp             TTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHH
T ss_pred             HhCCCCCCccEEEEEeeCCEEEEEEEcCCCCcHHHHHHh
Confidence            468999999999999999999999999999999888765

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=97.73  E-value=7.7e-05  Score=56.80  Aligned_cols=40  Identities=23%  Similarity=0.493  Sum_probs=36.5

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      .++.|||||+++.++.+.+.++++||||.+|+|..+++..
T Consensus        98 ~~l~HpnIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~l~~~  137 (329)
T 4aoj_A           98 TMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSH  137 (329)
T ss_dssp             TTCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHTS
T ss_pred             HhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHHhc
Confidence            4589999999999999999999999999999998887654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=97.71  E-value=1.9e-05  Score=59.70  Aligned_cols=39  Identities=33%  Similarity=0.576  Sum_probs=35.8

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      ++.|||||++++.+.+...++++||||.+|+|..+++..
T Consensus        85 ~l~HpNIV~l~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~  123 (308)
T 4gt4_A           85 RLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMR  123 (308)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCSSCBHHHHHHTT
T ss_pred             hCCCCCCCCcceEEEECCEEEEEEEcCCCCcHHHHHHhh
Confidence            588999999999999999999999999999998887653

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=97.68  E-value=1.5e-05  Score=60.22  Aligned_cols=39  Identities=28%  Similarity=0.572  Sum_probs=35.2

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .++.|||||++++++++.+.+|++||||.||+|...+.+
T Consensus        81 ~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~l~~  119 (304)
T 3ubd_A           81 VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSK  119 (304)
T ss_dssp             CCCCCTTEECEEEEEEETTEEEEEECCCTTCEEHHHHHH
T ss_pred             HHCCCCCCCeEEEEEEECCEEEEEEEcCCCCCHHHHHHh
Confidence            468999999999999999999999999999999776644

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=97.67  E-value=9.3e-05  Score=60.40  Aligned_cols=75  Identities=27%  Similarity=0.387  Sum_probs=52.4

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...|..++.+......  ..... .+...+..+     ..+.|||||++++.+++...++++||||.||+|.
T Consensus       171 g~V~~~~~~~tg~~~AiK~i~~~~--~~~~~-~~~~Ei~il-----~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~L~  242 (573)
T 3uto_A          171 GVVHRVTERATGNNFAAKFVMTPH--ESDKE-TVRKEIQTM-----SVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELF  242 (573)
T ss_dssp             EEEEEEEETTTCCEEEEEEEECCS--HHHHH-HHHHHHHHH-----HHTCCTTBCCEEEEEECSSEEEEEEECCCCCBHH
T ss_pred             eEEEEEEECCCCCEEEEEEEeccc--hhhHH-HHHHHHHHH-----HhCCCCCCCeEEEEEEECCEEEEEEeecCCCcHH
Confidence            568888887777777766544322  11111 112222222     3578999999999999999999999999999987


Q ss_pred             cce
Q psy11428        118 RIV  120 (160)
Q Consensus       118 ~ii  120 (160)
                      ..+
T Consensus       243 ~~i  245 (573)
T 3uto_A          243 EKV  245 (573)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            655

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=97.54  E-value=0.00025  Score=53.47  Aligned_cols=75  Identities=17%  Similarity=0.338  Sum_probs=47.0

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|.+.   -.++.+.+..............+..    ++..+  .+++|||||+++..+.. +.++++||||.||+|.
T Consensus        50 G~Vy~~~---~~~~vAvK~~~~~~~~~~~~~~f~~----E~~il--~~l~HpNIV~l~g~~~~-~~~~iVmEy~~gGsL~  119 (307)
T 3omv_A           50 GTVYKGK---WHGDVAVKILKVVDPTPEQFQAFRN----EVAVL--RKTRHVNILLFMGYMTK-DNLAIVTQWCEGSSLY  119 (307)
T ss_dssp             SEEEEEE---SSSEEEEEECCCSSCCHHHHHHHHH----HHHHH--TTCCCTTBCCEEEEECS-SSCEEEEECCSSCBHH
T ss_pred             cEEEEEE---ECCcEEEEEEEecCCCHHHHHHHHH----HHHHH--HhCCCCCEeeEEEEEEC-CeEEEEEEcCCCCCHH
Confidence            4567663   2345555544332233333332222    22222  36899999999997754 5689999999999998


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      ..++.
T Consensus       120 ~~l~~  124 (307)
T 3omv_A          120 KHLHV  124 (307)
T ss_dssp             HHHHT
T ss_pred             HHHhh
Confidence            87764

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=97.41  E-value=0.00014  Score=55.93  Aligned_cols=36  Identities=33%  Similarity=0.596  Sum_probs=30.9

Q ss_pred             CCCceeEEeeeee-cCCeeEEEEEecCCCCcccceec
Q psy11428         87 HHENVVELLHCKE-SDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        87 ~h~niv~~~~~~~-~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      +|||||++++.+. +.+.++++||||.+|+|..+++.
T Consensus       126 hhpnIV~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~  162 (353)
T 4ase_A          126 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS  162 (353)
T ss_dssp             CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHH
T ss_pred             CCCcEEEEEEEEEecCCEEEEEEEcCCCCCHHHHHHh
Confidence            5699999999875 45679999999999999888764

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=97.38  E-value=0.00027  Score=53.03  Aligned_cols=39  Identities=26%  Similarity=0.551  Sum_probs=32.7

Q ss_pred             hhcCCCceeEEeeeeecCC----eeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQ----HVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~----~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+++|||||+++..+...+    .++++||||.||+|..++++
T Consensus        52 ~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~gsL~~~l~~   94 (303)
T 3hmm_A           52 VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR   94 (303)
T ss_dssp             TTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH
T ss_pred             hcCCCCCCCcEEEEEEecCCCceEEEEEecCCCCCcHHHHHHh
Confidence            4689999999999887554    58999999999999877654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=97.36  E-value=0.00072  Score=52.74  Aligned_cols=87  Identities=20%  Similarity=0.284  Sum_probs=53.6

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec------
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES------  100 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~------  100 (160)
                      +++.+|.. .-+.+|++.+...|..++.+...+..........+.    .++..+  ..+.|||||++++.+..      
T Consensus        58 ~~~~lG~G-~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~----~Ei~il--~~l~HpnIv~l~~~~~~~~~~~~  130 (398)
T 4b99_A           58 IIETIGNG-AYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTL----RELKIL--KHFKHDNIIAIKDILRPTVPYGE  130 (398)
T ss_dssp             EEEEEEEC-SSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHH----HHHHHH--HHCCCTTBCCEEEECCCSSCTTT
T ss_pred             EEEEEecc-cCeEEEEEEECCCCCEEEEEEECccccchHHHHHHH----HHHHHH--HhcCCCCcceEeeeeeccccccc
Confidence            34444432 236788888877777777776544333333322222    222222  35789999999998754      


Q ss_pred             CCeeEEEEEecCCCCccccee
Q psy11428        101 DQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus       101 ~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.+|++||||. |+|..++.
T Consensus       131 ~~~~~ivmE~~~-g~L~~~i~  150 (398)
T 4b99_A          131 FKSVYVVLDLME-SDLHQIIH  150 (398)
T ss_dssp             CCCEEEEEECCS-EEHHHHHT
T ss_pred             CCEEEEEEeCCC-CCHHHHHH
Confidence            467899999996 45655553

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=97.33  E-value=0.00083  Score=49.66  Aligned_cols=81  Identities=22%  Similarity=0.309  Sum_probs=53.0

Q ss_pred             cCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCC
Q psy11428         36 SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD  115 (160)
Q Consensus        36 ~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~  115 (160)
                      ..+.+|++.+...+..++.+...................+..     ..++.|||++++++.++..+..+++|||+.|++
T Consensus        23 ~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~-----l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~   97 (294)
T 4eqm_A           23 GMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN-----SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPT   97 (294)
T ss_dssp             TTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHH-----HTTCCBTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred             CCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHH-----HhcCCCCCCceEEEeeeeCCeEEEEEeCCCCCC
Confidence            346788887766666666554433222222222111122222     235789999999999999999999999999999


Q ss_pred             ccccee
Q psy11428        116 LARIVH  121 (160)
Q Consensus       116 l~~iih  121 (160)
                      |..++.
T Consensus        98 L~~~l~  103 (294)
T 4eqm_A           98 LSEYIE  103 (294)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            976654

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=97.32  E-value=0.00032  Score=51.92  Aligned_cols=79  Identities=14%  Similarity=0.246  Sum_probs=51.8

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCC-HHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|++.+...+..++.++....... ......+..+ ...     ...+.|||++++++.++..+..+++|||+.|++|
T Consensus        45 g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e-~~~-----l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g~~L  118 (286)
T 3uqc_A           45 LQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSR-TLR-----LSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSL  118 (286)
T ss_dssp             CEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHH-HHH-----HHTCCCTTBCCEEEEEEETTEEEEEEECCCEEEH
T ss_pred             eEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHH-HHH-----HhcCCCCCcceeeEEEEECCcEEEEEEecCCCCH
Confidence            56788776554555555544332222 2222222222 122     2357899999999999999999999999999998


Q ss_pred             ccceec
Q psy11428        117 ARIVHR  122 (160)
Q Consensus       117 ~~iih~  122 (160)
                      ..++.+
T Consensus       119 ~~~l~~  124 (286)
T 3uqc_A          119 QEVADT  124 (286)
T ss_dssp             HHHHTT
T ss_pred             HHHHhc
Confidence            776643

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=97.31  E-value=0.00086  Score=50.66  Aligned_cols=78  Identities=26%  Similarity=0.532  Sum_probs=55.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+..............+..+ +..+     ..+.|||++++++.++..+.++++|||+.|+++.
T Consensus        29 g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E-~~~l-----~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~~L~  102 (328)
T 3fe3_A           29 AKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFRE-VRIM-----KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF  102 (328)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHH-HHHH-----HHCCCTTBCCEEEEEECSSEEEEEECCCTTCBHH
T ss_pred             EEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHH-HHHH-----HhCCCCCEeeEEEEEEECCEEEEEEECCCCCcHH
Confidence            568888877777777777655544444333333222 2222     3478999999999999999999999999999987


Q ss_pred             ccee
Q psy11428        118 RIVH  121 (160)
Q Consensus       118 ~iih  121 (160)
                      ..+.
T Consensus       103 ~~l~  106 (328)
T 3fe3_A          103 DYLV  106 (328)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6553

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=97.27  E-value=0.0021  Score=49.33  Aligned_cols=80  Identities=15%  Similarity=0.158  Sum_probs=55.1

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|++.+...+..++.+..............+ ...+..+     ..+.||||+++++.+...+.++++|||+.++++
T Consensus        40 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~-~~E~~~l-----~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L  113 (389)
T 3gni_B           40 LMTVNLARYKPTGEYVTVRRINLEACSNEMVTFL-QGELHVS-----KLFNHPNIVPYRATFIADNELWVVTSFMAYGSA  113 (389)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHH-HHHHHHH-----HHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred             ceEEEEEEEcCCCCEEEEEEecccccChHHHHHH-HHHHHHH-----HhCCCCCCCcEeEEEEECCEEEEEEEccCCCCH
Confidence            3568888776666666666555443333332222 2222222     347899999999999999999999999999999


Q ss_pred             ccceec
Q psy11428        117 ARIVHR  122 (160)
Q Consensus       117 ~~iih~  122 (160)
                      ..++..
T Consensus       114 ~~~l~~  119 (389)
T 3gni_B          114 KDLICT  119 (389)
T ss_dssp             HHHHHH
T ss_pred             HHHHhh
Confidence            776643

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=97.25  E-value=0.0012  Score=50.42  Aligned_cols=79  Identities=20%  Similarity=0.337  Sum_probs=54.8

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|.+.+...+..++.+..............+..+ +..+     ..+.|||++++++.+......+++|||+.|++|
T Consensus        42 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E-~~il-----~~l~hpnIv~~~~~~~~~~~~~lv~e~~~gg~L  115 (362)
T 2bdw_A           42 FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE-ARIC-----RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL  115 (362)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHH-HHHH-----HHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             CeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHH-HHHH-----HhCCCCCCCeEEEEEEeCCEEEEEEecCCCCCH
Confidence            3577888776666667766655444444433332222 2222     347899999999999999999999999999988


Q ss_pred             cccee
Q psy11428        117 ARIVH  121 (160)
Q Consensus       117 ~~iih  121 (160)
                      ...+.
T Consensus       116 ~~~l~  120 (362)
T 2bdw_A          116 FEDIV  120 (362)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            65543

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=97.18  E-value=0.00097  Score=52.64  Aligned_cols=87  Identities=21%  Similarity=0.311  Sum_probs=57.0

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +.+.++.. ..+.+|.+.+...+..++.+..............+.. .+..+     ..+.||||+++++.+++.+..++
T Consensus        15 i~~~LG~G-~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~-E~~il-----~~l~hpnIv~l~~~~~~~~~~~l   87 (444)
T 3soa_A           15 LFEELGKG-AFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER-EARIC-----RLLKHPNIVRLHDSISEEGHHYL   87 (444)
T ss_dssp             EEEEEEEC---CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHH-HHHHH-----HHCCBTTBCCEEEEEECSSEEEE
T ss_pred             EEEEeccC-CCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHH-HHHHH-----HhCCCcCCCeEEEEEEECCEEEE
Confidence            34444432 2367888887777766666665544443333322222 22222     34789999999999999999999


Q ss_pred             EEEecCCCCcccce
Q psy11428        107 VMEFCNGGDLARIV  120 (160)
Q Consensus       107 ~~ey~~~~~l~~ii  120 (160)
                      +||||.|++|...+
T Consensus        88 v~E~~~gg~L~~~i  101 (444)
T 3soa_A           88 IFDLVTGGELFEDI  101 (444)
T ss_dssp             EECCCBCCBHHHHH
T ss_pred             EEEeCCCCCHHHHH
Confidence            99999999986544

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=97.15  E-value=0.00098  Score=50.70  Aligned_cols=90  Identities=21%  Similarity=0.293  Sum_probs=55.1

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.++.. ..+.+|++.+...+..++.+...+..................+..    -..|||+++++..+.+...+++
T Consensus        13 ~~~~lG~G-~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~----~~~hp~iv~l~~~~~~~~~~~l   87 (345)
T 3a8x_A           13 LLRVIGRG-SYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ----ASNHPFLVGLHSCFQTESRLFF   87 (345)
T ss_dssp             EEEEEEEC-SSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHH----TTTCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEEec-CCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHh----cCCCCccCeEEEEEEeCCEEEE
Confidence            44444432 235778887755555566555544433222222111122222211    1379999999999999999999


Q ss_pred             EEEecCCCCccccee
Q psy11428        107 VMEFCNGGDLARIVH  121 (160)
Q Consensus       107 ~~ey~~~~~l~~iih  121 (160)
                      +|||+.|++|...+.
T Consensus        88 v~e~~~gg~L~~~l~  102 (345)
T 3a8x_A           88 VIEYVNGGDLMFHMQ  102 (345)
T ss_dssp             EECCCCSCBHHHHHH
T ss_pred             EEeCCCCCcHHHHHH
Confidence            999999999865543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=97.14  E-value=0.00045  Score=53.01  Aligned_cols=88  Identities=19%  Similarity=0.262  Sum_probs=56.3

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHH----HHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSED----TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ  102 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~  102 (160)
                      +.+.++.. ..+.+|++.+...+..++.+..........    ....+ .   .++..+  ..+.|||++++++.++...
T Consensus        16 ~~~~LG~G-~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~-~---~E~~il--~~l~hpnIv~l~~~~~~~~   88 (361)
T 2yab_A           16 IGEELGSG-QFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEI-E---REVSIL--RQVLHPNIITLHDVYENRT   88 (361)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHH-H---HHHHHH--TTCCCTTBCCEEEEEECSS
T ss_pred             EeeEEeeC-cCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHH-H---HHHHHH--HhCCCcCCCcEEEEEEeCC
Confidence            33444422 336788888776676677665544322111    01111 1   122222  3578999999999999999


Q ss_pred             eeEEEEEecCCCCccccee
Q psy11428        103 HVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus       103 ~~~~~~ey~~~~~l~~iih  121 (160)
                      .++++|||+.|++|..++.
T Consensus        89 ~~~lv~e~~~gg~L~~~l~  107 (361)
T 2yab_A           89 DVVLILELVSGGELFDFLA  107 (361)
T ss_dssp             EEEEEEECCCSCBHHHHHT
T ss_pred             EEEEEEEcCCCCcHHHHHH
Confidence            9999999999999976653

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=97.13  E-value=0.0024  Score=46.38  Aligned_cols=89  Identities=22%  Similarity=0.278  Sum_probs=56.9

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeeecCCeeE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKESDQHVY  105 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~~~~~~  105 (160)
                      +.+.++.- ..+.+|.+.+...+..++.+.................++. .+     ..+ .|||++++++.+...+..+
T Consensus        15 ~~~~lg~G-~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~-~~-----~~l~~h~~iv~~~~~~~~~~~~~   87 (289)
T 1x8b_A           15 ELEKIGSG-EFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVY-AH-----AVLGQHSHVVRYFSAWAEDDHML   87 (289)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHH-HH-----HHSCSCTTBCCEEEEEEETTEEE
T ss_pred             hhhhhcCC-CceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHH-HH-----HHhCCCCCeeeeeeeeecCCeEE
Confidence            34444432 3467888877666666666654433222222222222221 11     234 8999999999999999999


Q ss_pred             EEEEecCCCCcccceec
Q psy11428        106 LVMEFCNGGDLARIVHR  122 (160)
Q Consensus       106 ~~~ey~~~~~l~~iih~  122 (160)
                      ++|||+.+++|..++..
T Consensus        88 lv~e~~~~~~L~~~l~~  104 (289)
T 1x8b_A           88 IQNEYCNGGSLADAISE  104 (289)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             EEEEecCCCcHHHHHHh
Confidence            99999999999776643

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=97.10  E-value=0.00039  Score=52.35  Aligned_cols=91  Identities=15%  Similarity=0.262  Sum_probs=55.9

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeE
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY  105 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~  105 (160)
                      .+++.++.- ..+.+|++.+...+..++.+...+........   ......+...  ...+.|||+++++..+.+...++
T Consensus         9 ~~~~~lG~G-~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~---~~~~~~E~~~--l~~l~hp~Iv~~~~~~~~~~~~~   82 (318)
T 1fot_A            9 QILRTLGTG-SFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQ---VEHTNDERLM--LSIVTHPFIIRMWGTFQDAQQIF   82 (318)
T ss_dssp             EEEEEEEEC-SSCEEEEEEETTTCCEEEEEEEEHHHHHHTTC---HHHHHHHHHH--HHSCCBTTBCCEEEEEECSSEEE
T ss_pred             EEEEEEeeC-CCEEEEEEEECCCCCEEEEEEEEHHHhhhhhH---HHHHHHHHHH--HhhCCCCCCceEeEEEEeCCEEE
Confidence            344555532 33678888776666666655543321100000   0111111111  13478999999999999999999


Q ss_pred             EEEEecCCCCcccceec
Q psy11428        106 LVMEFCNGGDLARIVHR  122 (160)
Q Consensus       106 ~~~ey~~~~~l~~iih~  122 (160)
                      ++|||+.|++|..++.+
T Consensus        83 lv~e~~~gg~L~~~l~~   99 (318)
T 1fot_A           83 MIMDYIEGGELFSLLRK   99 (318)
T ss_dssp             EEECCCCSCBHHHHHHH
T ss_pred             EEEeCCCCCCHHHHHHH
Confidence            99999999999766543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=97.08  E-value=0.0013  Score=51.20  Aligned_cols=91  Identities=21%  Similarity=0.299  Sum_probs=53.6

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeE
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY  105 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~  105 (160)
                      .+++.++.- ..+.+|++.....+..++.++..+..................+..    -..|||+++++..+.+...++
T Consensus        55 ~~~~~LG~G-~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~----~~~hp~Iv~l~~~~~~~~~~~  129 (396)
T 4dc2_A           55 DLLRVIGRG-SYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ----ASNHPFLVGLHSCFQTESRLF  129 (396)
T ss_dssp             EEEEEEEEC-SSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHH----HTTCTTBCCEEEEEECSSEEE
T ss_pred             EEEEEEeeC-CCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHh----cCCCCCcCeeEEEEEECCEEE
Confidence            344544432 336778887655555556555444332221111111111111111    137999999999999999999


Q ss_pred             EEEEecCCCCccccee
Q psy11428        106 LVMEFCNGGDLARIVH  121 (160)
Q Consensus       106 ~~~ey~~~~~l~~iih  121 (160)
                      ++|||+.|++|...+.
T Consensus       130 lV~E~~~gg~L~~~l~  145 (396)
T 4dc2_A          130 FVIEYVNGGDLMFHMQ  145 (396)
T ss_dssp             EEEECCTTCBHHHHHH
T ss_pred             EEEEcCCCCcHHHHHH
Confidence            9999999999865543

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=97.07  E-value=0.0013  Score=53.62  Aligned_cols=36  Identities=25%  Similarity=0.218  Sum_probs=33.2

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .|+|++++++++++.+..|+|||||.|++|...+-+
T Consensus       300 ~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~  335 (569)
T 4azs_A          300 AGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAA  335 (569)
T ss_dssp             TTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHT
T ss_pred             CCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHh
Confidence            799999999999999999999999999999877644

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=97.06  E-value=0.0014  Score=50.01  Aligned_cols=90  Identities=22%  Similarity=0.303  Sum_probs=53.9

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeeecCCee
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKESDQHV  104 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~~~~~  104 (160)
                      .+++.++.- ..+.+|++.+...+..++.++..+.........   .....+...+  ..+ .|||+++++..++..+.+
T Consensus        26 ~~~~~lG~G-~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~---~~~~~E~~il--~~~~~hp~Iv~l~~~~~~~~~~   99 (353)
T 3txo_A           26 EFIRVLGKG-SFGKVMLARVKETGDLYAVKVLKKDVILQDDDV---ECTMTEKRIL--SLARNHPFLTQLFCCFQTPDRL   99 (353)
T ss_dssp             EEEEEEEEE-TTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTH---HHHHHHHHHH--HHTTTCTTBCCEEEEEECSSEE
T ss_pred             EEEEEEeeC-CCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHH---HHHHHHHHHH--HhccCCCceeeEEEEEEeCCEE
Confidence            444555432 336788887766565566555433211111001   1111111111  123 699999999999999999


Q ss_pred             EEEEEecCCCCccccee
Q psy11428        105 YLVMEFCNGGDLARIVH  121 (160)
Q Consensus       105 ~~~~ey~~~~~l~~iih  121 (160)
                      +++|||+.|++|...+.
T Consensus       100 ~lv~E~~~gg~L~~~l~  116 (353)
T 3txo_A          100 FFVMEFVNGGDLMFHIQ  116 (353)
T ss_dssp             EEEEECCCSCBHHHHHH
T ss_pred             EEEEeCCCCCcHHHHHH
Confidence            99999999999865553

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=97.06  E-value=0.0017  Score=48.08  Aligned_cols=87  Identities=20%  Similarity=0.338  Sum_probs=55.8

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.++.. ..+.+|++.+...+..++.+............  + ...+..+     ..+.|||++++++.+...+..++
T Consensus        24 ~~~~lg~G-~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~--~-~~E~~~l-----~~l~hp~iv~~~~~~~~~~~~~l   94 (297)
T 3fxz_A           24 RFEKIGQG-ASGTVYTAMDVATGQEVAIRQMNLQQQPKKEL--I-INEILVM-----RENKNPNIVNYLDSYLVGDELWV   94 (297)
T ss_dssp             CCEEEEEE-TTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHH--H-HHHHHHH-----HHCCCTTBCCEEEEEEETTEEEE
T ss_pred             eeeeeccC-CCeEEEEEEECCCCcEEEEEEeecccccHHHH--H-HHHHHHH-----hcCCCCCCCeEeEEEEECCEEEE
Confidence            34444432 34678888776666666655443322222111  1 1111222     34789999999999999999999


Q ss_pred             EEEecCCCCcccceec
Q psy11428        107 VMEFCNGGDLARIVHR  122 (160)
Q Consensus       107 ~~ey~~~~~l~~iih~  122 (160)
                      +|||+.|++|..++.+
T Consensus        95 v~e~~~~~~L~~~~~~  110 (297)
T 3fxz_A           95 VMEYLAGGSLTDVVTE  110 (297)
T ss_dssp             EEECCTTCBHHHHHHH
T ss_pred             EEECCCCCCHHHHHhh
Confidence            9999999999776544

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=96.99  E-value=0.0025  Score=48.96  Aligned_cols=34  Identities=21%  Similarity=0.431  Sum_probs=31.7

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccce
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIV  120 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~ii  120 (160)
                      +||||+++++.+++.+.++++||||.|++|..++
T Consensus        78 ~h~nIv~l~~~~~~~~~~~lvmE~~~g~~L~~~~  111 (361)
T 4f9c_A           78 GQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDIL  111 (361)
T ss_dssp             SBTTBCCCSEEEEETTEEEEEEECCCCCCHHHHH
T ss_pred             CCCCCceEEEEEEECCEEEEEEeCCCcccHHHHH
Confidence            6999999999999999999999999999997665

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=96.93  E-value=0.00073  Score=51.54  Aligned_cols=80  Identities=19%  Similarity=0.336  Sum_probs=51.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.++..+.......   .......+...+  ..+.|||+++++..+.+...++++|||+.|++|.
T Consensus        55 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~---~~~~~~~E~~~l--~~l~hp~iv~~~~~~~~~~~~~lv~e~~~gg~L~  129 (350)
T 1rdq_E           55 GRVMLVKHKESGNHYAMKILDKQKVVKLK---QIEHTLNEKRIL--QAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMF  129 (350)
T ss_dssp             CEEEEEEETTTCCEEEEEEEEHHHHHHTT---CHHHHHHHHHHH--TTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHH
T ss_pred             cEEEEEEECCCCCEEEEEEEEhHHhccHH---HHHHHHHHHHHH--HhCCCCCCCeEEEEEEcCCEEEEEEcCCCCCcHH
Confidence            57888877666666665554322110000   011111222222  3578999999999999999999999999999997


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      ..+.+
T Consensus       130 ~~l~~  134 (350)
T 1rdq_E          130 SHLRR  134 (350)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66543

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=96.93  E-value=0.0008  Score=50.59  Aligned_cols=78  Identities=26%  Similarity=0.322  Sum_probs=51.2

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHH----HHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSED----TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNG  113 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~  113 (160)
                      +.+|.+.+...+..++.+..........    ....+. ..+..+     ..+.|||++++++.+......+++|||+.+
T Consensus        25 g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~-~E~~~l-----~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   98 (326)
T 2y0a_A           25 AVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSIL-----KEIQHPNVITLHEVYENKTDVILILELVAG   98 (326)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHH-HHHHHH-----HHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             eEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHH-HHHHHH-----HhCCCCCCCcEEEEEEeCCEEEEEEEcCCC
Confidence            5677777766666666665443322110    111111 122222     247899999999999999999999999999


Q ss_pred             CCccccee
Q psy11428        114 GDLARIVH  121 (160)
Q Consensus       114 ~~l~~iih  121 (160)
                      ++|..++.
T Consensus        99 ~~L~~~l~  106 (326)
T 2y0a_A           99 GELFDFLA  106 (326)
T ss_dssp             CBHHHHHT
T ss_pred             CCHHHHHH
Confidence            99977654

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=96.91  E-value=0.0034  Score=47.87  Aligned_cols=74  Identities=18%  Similarity=0.321  Sum_probs=51.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+............   . ..+..+     ..+.|||+++++..+.....++++|||+.+++|.
T Consensus        34 g~V~~~~~~~~~~~vavK~~~~~~~~~~~~---~-~E~~~l-----~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L~  104 (361)
T 3uc3_A           34 GVARLMRDKLTKELVAVKYIERGAAIDENV---Q-REIINH-----RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY  104 (361)
T ss_dssp             SSEEEEEETTTCCEEEEEEEESSTTSCHHH---H-HHHHHH-----HHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred             EEEEEEEECCCCcEEEEEEEecCccccHHH---H-HHHHHH-----HhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCHH
Confidence            578888877666667666554433222111   1 111122     3478999999999999999999999999999986


Q ss_pred             cce
Q psy11428        118 RIV  120 (160)
Q Consensus       118 ~ii  120 (160)
                      ..+
T Consensus       105 ~~l  107 (361)
T 3uc3_A          105 ERI  107 (361)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=96.91  E-value=0.00077  Score=51.19  Aligned_cols=88  Identities=23%  Similarity=0.314  Sum_probs=54.2

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCC-CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY  105 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~  105 (160)
                      +++.++.. ..+.+|++.+...+..++.+...+... ......    ....+...+  ..+.|||+++++..+...+.++
T Consensus         9 ~~~~lG~G-~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~----~~~~E~~~l--~~l~hp~iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            9 YLKLLGKG-TFGKVILVREKATGRYYAMKILRKEVIIAKDEVA----HTVTESRVL--QNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             EEEEEEEC-SSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHH----HHHHHHHHH--HSCCCTTBCCEEEEEECSSEEE
T ss_pred             EEEEEecC-CCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHH----HHHHHHHHH--HhCCCCcCcceEEEEEeCCEEE
Confidence            44444432 235678887766666666555433211 000111    111122221  3578999999999999999999


Q ss_pred             EEEEecCCCCccccee
Q psy11428        106 LVMEFCNGGDLARIVH  121 (160)
Q Consensus       106 ~~~ey~~~~~l~~iih  121 (160)
                      ++|||+.|++|...+.
T Consensus        82 lv~E~~~gg~L~~~l~   97 (337)
T 1o6l_A           82 FVMEYANGGELFFHLS   97 (337)
T ss_dssp             EEEECCTTCBHHHHHH
T ss_pred             EEEeCCCCCcHHHHHH
Confidence            9999999999865543

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=96.90  E-value=0.00085  Score=53.49  Aligned_cols=79  Identities=16%  Similarity=0.372  Sum_probs=52.0

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.++...........   ...+..++..+  ..+.|||++++++.+.....++++|||+.|++|.
T Consensus        30 g~V~~a~~~~~g~~vAvK~i~~~~~~~~~~---~~~~~~Ei~~l--~~l~HpnIv~l~~~~~~~~~~~lv~E~~~gg~L~  104 (476)
T 2y94_A           30 GKVKVGKHELTGHKVAVKILNRQKIRSLDV---VGKIRREIQNL--KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELF  104 (476)
T ss_dssp             SCEEEEEETTTCCEEEEEEEEHHHHHHTTT---HHHHHHHHHHH--TTCCCTTBCCEEEEEECSSEEEEEEECCSSEEHH
T ss_pred             eEEEEEEECCCCCEEEEEEEEhhhccCHHH---HHHHHHHHHHH--HhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcHH
Confidence            568888776666666666544321111011   11122222222  3578999999999999999999999999999987


Q ss_pred             ccee
Q psy11428        118 RIVH  121 (160)
Q Consensus       118 ~iih  121 (160)
                      .++.
T Consensus       105 ~~l~  108 (476)
T 2y94_A          105 DYIC  108 (476)
T ss_dssp             HHTT
T ss_pred             HHHH
Confidence            6654

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=96.90  E-value=0.0035  Score=47.12  Aligned_cols=77  Identities=18%  Similarity=0.269  Sum_probs=48.9

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCC-HHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|.+.+.-.+..++.++....... ......+. ..+..+     ..+.|||++++++.+...+..+++|||+.++++
T Consensus        55 g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~-~E~~~l-----~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  128 (335)
T 2owb_A           55 AKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS-MEISIH-----RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL  128 (335)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHH-HHHHHH-----HTCCCTTBCCEEEEEECSSEEEEEECCCTTCBH
T ss_pred             eEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHH-HHHHHH-----HhCCCCCCCeEEEEEecCCeEEEEEecCCCCCH
Confidence            45677766544444555544433222 22222222 222222     357899999999999999999999999999988


Q ss_pred             ccce
Q psy11428        117 ARIV  120 (160)
Q Consensus       117 ~~ii  120 (160)
                      ..++
T Consensus       129 ~~~~  132 (335)
T 2owb_A          129 LELH  132 (335)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6544

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=96.89  E-value=0.0009  Score=51.86  Aligned_cols=90  Identities=18%  Similarity=0.258  Sum_probs=54.9

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.++.. ..+.+|++.+...+..++.+...+........   ...+..++..+  ..+.|||+++++..+.+...+++
T Consensus        19 i~~~LG~G-~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~---~~~~~~E~~il--~~l~hp~Iv~l~~~~~~~~~~~l   92 (384)
T 4fr4_A           19 ILRAIGKG-SFGKVCIVQKNDTKKMYAMKYMNKQKCVERNE---VRNVFKELQIM--QGLEHPFLVNLWYSFQDEEDMFM   92 (384)
T ss_dssp             EEEEEECC-TTCCEEEEEETTTCCEEEEEEEEHHHHHHTTC---HHHHHHHHHHH--HTCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeC-CCeEEEEEEECCCCCEEEEEEEehhhcccHHH---HHHHHHHHHHH--HhCCCCCCCcEEEEEEeCCEEEE
Confidence            44444432 33678888776555555555443221111000   01111222221  35789999999999999999999


Q ss_pred             EEEecCCCCcccceec
Q psy11428        107 VMEFCNGGDLARIVHR  122 (160)
Q Consensus       107 ~~ey~~~~~l~~iih~  122 (160)
                      +|||+.|++|...+.+
T Consensus        93 v~e~~~gg~L~~~l~~  108 (384)
T 4fr4_A           93 VVDLLLGGDLRYHLQQ  108 (384)
T ss_dssp             EECCCTTEEHHHHHHT
T ss_pred             EEecCCCCcHHHHHHh
Confidence            9999999998766543

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=96.87  E-value=0.0068  Score=44.41  Aligned_cols=77  Identities=18%  Similarity=0.269  Sum_probs=49.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCC-HHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|.+.+.-.+..++.++....... ......+. ..+..+     ..+.|||++++++.+...+..+++|||+.++++
T Consensus        29 g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~-~e~~~l-----~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L  102 (294)
T 2rku_A           29 AKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS-MEISIH-----RSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL  102 (294)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHH-HHHHHH-----HTCCCTTBCCEEEEEECSSEEEEEEECCTTCBH
T ss_pred             EEEEEEEECCCCceEEEEEechhhccCHHHHHHHH-HHHHHH-----HhCCCCCEeeeeeeeccCCEEEEEEecCCCCCH
Confidence            56777776554555555544433222 22222222 122222     357899999999999999999999999999988


Q ss_pred             ccce
Q psy11428        117 ARIV  120 (160)
Q Consensus       117 ~~ii  120 (160)
                      ..++
T Consensus       103 ~~~~  106 (294)
T 2rku_A          103 LELH  106 (294)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6544

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=96.86  E-value=0.0014  Score=51.92  Aligned_cols=79  Identities=29%  Similarity=0.351  Sum_probs=52.9

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCC-HHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCC
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD  115 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~  115 (160)
                      .+.+|++.+...+..++.+........ ......+. ..+..+     .++.|||+++++..++.....+++||||.+++
T Consensus        39 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~-~E~~~l-----~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~  112 (484)
T 3nyv_A           39 FGEVILCKDKITGQECAVKVISKRQVKQKTDKESLL-REVQLL-----KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGE  112 (484)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHH-HHHHHH-----TTCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHH-HHHHHH-----HhCCCCCCCcEEEEEEeCCEEEEEEecCCCCC
Confidence            467888887767777776665433222 11111111 112222     35789999999999999999999999999999


Q ss_pred             ccccee
Q psy11428        116 LARIVH  121 (160)
Q Consensus       116 l~~iih  121 (160)
                      +...+.
T Consensus       113 L~~~~~  118 (484)
T 3nyv_A          113 LFDEII  118 (484)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            865543

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=96.85  E-value=0.0038  Score=46.79  Aligned_cols=89  Identities=25%  Similarity=0.335  Sum_probs=55.6

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.++.- ..+.+|++.+...+..++.++........ ....+ ...+..+     ..+.|||++++++.+...+..++
T Consensus        11 i~~~lG~G-~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~-~~E~~~l-----~~l~hpnIv~~~~~~~~~~~~~l   82 (323)
T 3tki_A           11 LVQTLGEG-AYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENI-KKEICIN-----KMLNHENVVKFYGHRREGNIQYL   82 (323)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTTCCEEEEEEEECC--------CH-HHHHHHH-----HHCCCTTBCCEEEEEECSSEEEE
T ss_pred             eeeEEecC-CCEEEEEEEECCCCcEEEEEEEEcccccc-hHHHH-HHHHHHH-----HhCCCCCCCeEEEEEecCCeEEE
Confidence            44444432 33678888776666666666543322111 00111 1111222     24789999999999999999999


Q ss_pred             EEEecCCCCcccceecC
Q psy11428        107 VMEFCNGGDLARIVHRD  123 (160)
Q Consensus       107 ~~ey~~~~~l~~iih~d  123 (160)
                      +||||.|++|...+...
T Consensus        83 v~e~~~~~~L~~~l~~~   99 (323)
T 3tki_A           83 FLEYCSGGELFDRIEPD   99 (323)
T ss_dssp             EEECCTTEEGGGGSBTT
T ss_pred             EEEcCCCCcHHHHHhhc
Confidence            99999999997776543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=96.85  E-value=0.0026  Score=50.57  Aligned_cols=77  Identities=26%  Similarity=0.371  Sum_probs=48.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.++.............+.    .++..+  ..+.||||+++++.++....++++||||.+++|.
T Consensus        51 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~----~E~~~l--~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~  124 (494)
T 3lij_A           51 GEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL----EEVAVL--KLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF  124 (494)
T ss_dssp             -EEEEEEETTTCCEEEEEEEEC-----CTTHHHH----HHHHHH--TTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred             EEEEEEEECCCCcEEEEEEEeccccCchHHHHHH----HHHHHH--HhCCCCCCCeEEEEEEeCCEEEEEEecCCCCcHH
Confidence            5677777766666666655443322111111111    222222  3578999999999999999999999999999885


Q ss_pred             cce
Q psy11428        118 RIV  120 (160)
Q Consensus       118 ~ii  120 (160)
                      ..+
T Consensus       125 ~~~  127 (494)
T 3lij_A          125 DEI  127 (494)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            544

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=96.83  E-value=0.00027  Score=55.27  Aligned_cols=91  Identities=24%  Similarity=0.269  Sum_probs=54.7

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeE
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY  105 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~  105 (160)
                      .+++.++.. ..+.+|++.+...+..++.++..+..................+     ..+.|||+++++..+.+...++
T Consensus        72 ~~~~~LG~G-~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il-----~~l~hp~Iv~l~~~~~~~~~~~  145 (410)
T 3v8s_A           72 EVVKVIGRG-AFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-----AFANSPWVVQLFYAFQDDRYLY  145 (410)
T ss_dssp             EEEEEEEEC-SSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHH-----HHCCCTTBCCEEEEEECSSEEE
T ss_pred             EEEEEEEcC-CCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHH-----HhCCCCCCCeEEEEEEECCEEE
Confidence            444555432 2367888877665555565554321100000000011111111     2478999999999999999999


Q ss_pred             EEEEecCCCCcccceec
Q psy11428        106 LVMEFCNGGDLARIVHR  122 (160)
Q Consensus       106 ~~~ey~~~~~l~~iih~  122 (160)
                      ++|||+.||+|..++.+
T Consensus       146 lV~E~~~gg~L~~~l~~  162 (410)
T 3v8s_A          146 MVMEYMPGGDLVNLMSN  162 (410)
T ss_dssp             EEECCCTTEEHHHHHHH
T ss_pred             EEEeCCCCCcHHHHHHc
Confidence            99999999999766543

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=96.82  E-value=0.00065  Score=53.15  Aligned_cols=91  Identities=18%  Similarity=0.226  Sum_probs=56.0

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeE
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY  105 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~  105 (160)
                      .+.+.++.- ..+.+|++.....+..++.+...+..................+     ..+.|||+++++..+++.+.++
T Consensus        64 ~~~~~lG~G-~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il-----~~~~hp~Iv~l~~~~~~~~~~~  137 (412)
T 2vd5_A           64 EILKVIGRG-AFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVL-----VNGDRRWITQLHFAFQDENYLY  137 (412)
T ss_dssp             EEEEEEEEC-SSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHH-----HHSCTTTBCCEEEEEECSSEEE
T ss_pred             EEEEEEeeC-CCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHH-----HhcCCCCeeeEEEEEeeCCEEE
Confidence            444555432 2367888887666666666554321110000000011111111     2478999999999999999999


Q ss_pred             EEEEecCCCCcccceec
Q psy11428        106 LVMEFCNGGDLARIVHR  122 (160)
Q Consensus       106 ~~~ey~~~~~l~~iih~  122 (160)
                      ++|||+.|++|..++.+
T Consensus       138 lVmE~~~gg~L~~~l~~  154 (412)
T 2vd5_A          138 LVMEYYVGGDLLTLLSK  154 (412)
T ss_dssp             EEECCCCSCBHHHHHHH
T ss_pred             EEEcCCCCCcHHHHHHh
Confidence            99999999999877654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=96.80  E-value=0.0013  Score=50.08  Aligned_cols=93  Identities=18%  Similarity=0.216  Sum_probs=54.8

Q ss_pred             CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCC-HHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecC
Q psy11428         23 HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESD  101 (160)
Q Consensus        23 ~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~  101 (160)
                      +.-.+.+.++.. ..+.+|++.+...+..++.+...+.... ......... ....+.    ....|||+++++..+++.
T Consensus        17 ~~y~~~~~lG~G-~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~-E~~il~----~~~~hp~iv~l~~~~~~~   90 (345)
T 1xjd_A           17 EDFILHKMLGKG-SFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMV-EKRVLS----LAWEHPFLTHMFCTFQTK   90 (345)
T ss_dssp             TTEEEEEEEEEC-SSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHH-HHHHHH----HHTTCTTBCCEEEEEECS
T ss_pred             HHeEEEEEEeeC-CCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHH-HHHHHH----hcCCCCCCCcEEEEEEeC
Confidence            344455555533 2367888877555555555544322110 001111111 111111    124799999999999999


Q ss_pred             CeeEEEEEecCCCCccccee
Q psy11428        102 QHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus       102 ~~~~~~~ey~~~~~l~~iih  121 (160)
                      +.++++|||+.||+|...+.
T Consensus        91 ~~~~lv~E~~~gg~L~~~l~  110 (345)
T 1xjd_A           91 ENLFFVMEYLNGGDLMYHIQ  110 (345)
T ss_dssp             SEEEEEEECCTTCBHHHHHH
T ss_pred             CEEEEEEeCCCCCcHHHHHH
Confidence            99999999999999966553

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=96.80  E-value=0.0027  Score=47.65  Aligned_cols=88  Identities=24%  Similarity=0.346  Sum_probs=54.6

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecC---CCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCe
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT---LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQH  103 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~  103 (160)
                      +.+.++.. ..+.+|++.+...+..++.++.....   ........+.    .++..+  ..+.|||+++++..+...+.
T Consensus        30 ~~~~lG~G-~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~----~E~~~l--~~l~hpniv~~~~~~~~~~~  102 (345)
T 3hko_A           30 LKGAIGQG-SYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIK----TEVRLM--KKLHHPNIARLYEVYEDEQY  102 (345)
T ss_dssp             EEEEEEEC-SSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHH----HHHHHH--HHCCCTTBCCEEEEEECSSE
T ss_pred             ecceeeec-CCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHH----HHHHHH--HhCCCCCcceeehhhccCCe
Confidence            44444433 23567888765555555555443221   1111222222    122221  34789999999999999999


Q ss_pred             eEEEEEecCCCCccccee
Q psy11428        104 VYLVMEFCNGGDLARIVH  121 (160)
Q Consensus       104 ~~~~~ey~~~~~l~~iih  121 (160)
                      .+++|||+.|++|...+.
T Consensus       103 ~~lv~e~~~gg~L~~~l~  120 (345)
T 3hko_A          103 ICLVMELCHGGHLLDKLN  120 (345)
T ss_dssp             EEEEEECCCSCBHHHHEE
T ss_pred             EEEEEeCCCCCcHHHHHH
Confidence            999999999999987765

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=96.79  E-value=0.0026  Score=50.74  Aligned_cols=81  Identities=27%  Similarity=0.440  Sum_probs=48.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHH-------HHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEe
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDT-------IRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEF  110 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey  110 (160)
                      +.+|++.+...+..++.+...........       .......+..++..+  .++.||||+++++.++....++++|||
T Consensus        50 g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l--~~l~hpniv~~~~~~~~~~~~~lv~e~  127 (504)
T 3q5i_A           50 GEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL--KSLDHPNIIKLFDVFEDKKYFYLVTEF  127 (504)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHH--HTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             eEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHH--HhCCCCCCCeEEEEEEcCCEEEEEEec
Confidence            56777776555555665554432221100       001111222222222  357899999999999999999999999


Q ss_pred             cCCCCcccce
Q psy11428        111 CNGGDLARIV  120 (160)
Q Consensus       111 ~~~~~l~~ii  120 (160)
                      |.|++|...+
T Consensus       128 ~~gg~L~~~l  137 (504)
T 3q5i_A          128 YEGGELFEQI  137 (504)
T ss_dssp             CTTCBHHHHH
T ss_pred             CCCCcHHHHH
Confidence            9999886544

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=96.78  E-value=0.013  Score=43.53  Aligned_cols=77  Identities=23%  Similarity=0.416  Sum_probs=50.9

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++..  .+..++.++.............+..+ +..+     .++.|||++++++.+......+++|||+.+++|.
T Consensus        51 g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E-~~~l-----~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~  122 (309)
T 3p86_A           51 GTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLRE-VAIM-----KRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY  122 (309)
T ss_dssp             EEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHH-HHHH-----HHCCCTTBCCEEEEECSTTCCEEEEECCTTCBHH
T ss_pred             eEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHH-HHHH-----HhCCCCCEeeEEEEEEECCceEEEEecCCCCcHH
Confidence            45676643  45455555544333343333333222 2222     3478999999999999999999999999999997


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++.+
T Consensus       123 ~~l~~  127 (309)
T 3p86_A          123 RLLHK  127 (309)
T ss_dssp             HHHHS
T ss_pred             HHHhh
Confidence            76654

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=96.77  E-value=0.0017  Score=49.36  Aligned_cols=77  Identities=26%  Similarity=0.336  Sum_probs=49.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCC---CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTL---SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGG  114 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~  114 (160)
                      +.+|.+.+...+..++.++......   .......+ ...+..+     ..+.||||+++++.+...+.++++||||.|+
T Consensus        38 g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~-~~E~~~l-----~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~  111 (351)
T 3c0i_A           38 SVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDL-KREASIC-----HMLKHPHIVELLETYSSDGMLYMVFEFMDGA  111 (351)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHH-HHHHHHH-----HHCCCTTBCCEEEEEEETTEEEEEEECCSSC
T ss_pred             EEEEEEEECCCCCEEEEEEEEhhhccccccchHHHH-HHHHHHH-----HhCCCCCCCcEEEEEEeCCEEEEEEeCCCCC
Confidence            5678887766666666665432110   00001111 1112222     2478999999999999999999999999999


Q ss_pred             Ccccce
Q psy11428        115 DLARIV  120 (160)
Q Consensus       115 ~l~~ii  120 (160)
                      +|...+
T Consensus       112 ~L~~~l  117 (351)
T 3c0i_A          112 DLCFEI  117 (351)
T ss_dssp             BHHHHH
T ss_pred             CHHHHH
Confidence            885443

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=96.76  E-value=0.0056  Score=45.21  Aligned_cols=78  Identities=24%  Similarity=0.359  Sum_probs=50.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCC-CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|.+.+...+..++.+....... .......+..    ++..+  .++.|||+++++..+...+..+++|||+.+++|
T Consensus        46 g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~----E~~~l--~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  119 (310)
T 2wqm_A           46 SEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIK----EIDLL--KQLNHPNVIKYYASFIEDNELNIVLELADAGDL  119 (310)
T ss_dssp             CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHH----HHHHH--HTCCCTTBCCEEEEEEETTEEEEEEECCCSCBH
T ss_pred             ceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHH----HHHHH--HhCCCCCEeeEEEEEEcCCcEEEEEecCCCCCH
Confidence            5677777655555555554332222 2222222222    22221  357899999999999999999999999999998


Q ss_pred             cccee
Q psy11428        117 ARIVH  121 (160)
Q Consensus       117 ~~iih  121 (160)
                      ..++.
T Consensus       120 ~~~l~  124 (310)
T 2wqm_A          120 SRMIK  124 (310)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            76653

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=96.75  E-value=0.0096  Score=43.25  Aligned_cols=78  Identities=21%  Similarity=0.350  Sum_probs=53.2

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|.+.+...+..++.+..............+..+ ...+     .++.|||++++++.+......+++|||+.++++
T Consensus        19 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e-~~~l-----~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~l   92 (284)
T 3kk8_A           19 FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE-ARIC-----RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL   92 (284)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHH-HHHH-----HHCCCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred             CeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHH-HHHH-----HHcCCCCcCeEEEEEEcCCEEEEEEecCCCCCH
Confidence            3567887776666666666555444444433332222 2222     347899999999999999999999999999988


Q ss_pred             ccce
Q psy11428        117 ARIV  120 (160)
Q Consensus       117 ~~ii  120 (160)
                      ...+
T Consensus        93 ~~~~   96 (284)
T 3kk8_A           93 FEDI   96 (284)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=96.75  E-value=0.0037  Score=46.31  Aligned_cols=78  Identities=23%  Similarity=0.340  Sum_probs=50.2

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+.........  ...+..+ +..+..    -..|||++++++.+...+..+++|||+.+++|.
T Consensus        27 g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~E-~~~l~~----~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   99 (316)
T 2ac3_A           27 ARVQTCINLITSQEYAVKIIEKQPGHI--RSRVFRE-VEMLYQ----CQGHRNVLELIEFFEEEDRFYLVFEKMRGGSIL   99 (316)
T ss_dssp             EEEEEEECSSSCCEEEEEEEECCSSCC--HHHHHHH-HHHHHH----TCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred             EEEEEEEEcCCCcEEEEEEEeeCcchh--HHHHHHH-HHHHHH----hcCCCCeeeEEEEEeeCCEEEEEEEcCCCCcHH
Confidence            567777766666666666544332111  1111111 112211    147999999999999999999999999999987


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      ..+..
T Consensus       100 ~~l~~  104 (316)
T 2ac3_A          100 SHIHK  104 (316)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            66543

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=96.73  E-value=0.0034  Score=48.17  Aligned_cols=76  Identities=24%  Similarity=0.356  Sum_probs=47.8

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|.+.+...+..++.++.....  ......+    ..++..+  .++.|||++++++.+...+..+++|||+.+++|.
T Consensus       103 g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~----~~E~~~l--~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L~  174 (373)
T 2x4f_A          103 GQVHKCEETATGLKLAAKIIKTRG--MKDKEEV----KNEISVM--NQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF  174 (373)
T ss_dssp             -CEEEEEETTTCCEEEEEEEECCS--HHHHHHH----HHHHHHH--TTCCCTTBCCEEEEEECSSEEEEEEECCTTCEEH
T ss_pred             EEEEEEEEcCCCcEEEEEEEcccc--cccHHHH----HHHHHHH--HhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcHH
Confidence            456666655555555555433221  1111111    1222222  3578999999999999999999999999999886


Q ss_pred             ccee
Q psy11428        118 RIVH  121 (160)
Q Consensus       118 ~iih  121 (160)
                      ..+.
T Consensus       175 ~~l~  178 (373)
T 2x4f_A          175 DRII  178 (373)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5543

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=96.72  E-value=0.0059  Score=44.30  Aligned_cols=88  Identities=26%  Similarity=0.460  Sum_probs=54.9

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeee--ecCCee
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCK--ESDQHV  104 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~--~~~~~~  104 (160)
                      +.+.++.- ..+.+|.+.+...+..++.+..............+..+ +..+     .++.|||++++++.+  +.....
T Consensus        10 ~~~~lg~G-~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e-~~~l-----~~l~h~~i~~~~~~~~~~~~~~~   82 (279)
T 2w5a_A           10 VLYTIGTG-SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSE-VNLL-----RELKHPNIVRYYDRIIDRTNTTL   82 (279)
T ss_dssp             EEEEEEEC-SSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHH-HHHH-----HHCCCTTBCCEEEEEEEGGGTEE
T ss_pred             eehhccCC-CCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHH-HHHH-----HhcCCCCCCeEEEEEecCCCceE
Confidence            44444432 33568888776556556655544444444333322222 2222     247899999999976  456789


Q ss_pred             EEEEEecCCCCccccee
Q psy11428        105 YLVMEFCNGGDLARIVH  121 (160)
Q Consensus       105 ~~~~ey~~~~~l~~iih  121 (160)
                      +++|||+.+++|..++.
T Consensus        83 ~lv~e~~~~~~L~~~l~   99 (279)
T 2w5a_A           83 YIVMEYCEGGDLASVIT   99 (279)
T ss_dssp             EEEEECCTTEEHHHHHH
T ss_pred             EEEEeCCCCCCHHHHHH
Confidence            99999999998876654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=96.71  E-value=0.0028  Score=47.55  Aligned_cols=76  Identities=18%  Similarity=0.225  Sum_probs=49.7

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|.+.+...+..++.+.....   ...... ....+..+     ..+.|||++++++.++..+.++++||||.|++|.
T Consensus        19 g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~-~~~E~~~l-----~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L~   89 (321)
T 1tki_A           19 GIVHRCVETSSKKTYMAKFVKVK---GTDQVL-VKKEISIL-----NIARHRNILHLHESFESMEELVMIFEFISGLDIF   89 (321)
T ss_dssp             EEEEEEEETTTTEEEEEEEECCC---THHHHH-HHHHHHHH-----HHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred             eEEEEEEECCCCcEEEEEEEecC---cccHHH-HHHHHHHH-----HhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCHH
Confidence            56788776555545554443221   111111 12222222     2478999999999999999999999999999987


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      ..+..
T Consensus        90 ~~l~~   94 (321)
T 1tki_A           90 ERINT   94 (321)
T ss_dssp             HHHTS
T ss_pred             HHHHh
Confidence            66543

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=96.69  E-value=0.0056  Score=45.84  Aligned_cols=81  Identities=17%  Similarity=0.276  Sum_probs=51.8

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|++.+...+..++.+..............+..+ +..++.    -.+|||+++++..++.....+++|||+.+++|
T Consensus        42 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e-~~~l~~----l~~~~~iv~~~~~~~~~~~~~lv~e~~~~~~L  116 (327)
T 3lm5_A           42 FAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHE-IAVLEL----AKSCPRVINLHEVYENTSEIILILEYAAGGEI  116 (327)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHH-HHHHHH----TTTCTTBCCEEEEEECSSEEEEEEECCTTEEG
T ss_pred             CeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHH-HHHHHh----ccCCCCEEEEEEEEEeCCeEEEEEEecCCCcH
Confidence            3567888776666666666544332222111222221 122221    12679999999999999999999999999998


Q ss_pred             ccceec
Q psy11428        117 ARIVHR  122 (160)
Q Consensus       117 ~~iih~  122 (160)
                      ..++..
T Consensus       117 ~~~~~~  122 (327)
T 3lm5_A          117 FSLCLP  122 (327)
T ss_dssp             GGGGSS
T ss_pred             HHHHHH
Confidence            776643

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=96.67  E-value=0.0074  Score=43.38  Aligned_cols=88  Identities=18%  Similarity=0.236  Sum_probs=54.4

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecC--Cee
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESD--QHV  104 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~--~~~  104 (160)
                      +.+.++.. ..+.+|.+..  .+..++.+.......+......+.    .+...  ...+.|||++++++.+...  ...
T Consensus        14 ~~~~lg~G-~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~----~E~~~--l~~l~h~~iv~~~~~~~~~~~~~~   84 (271)
T 3kmu_A           14 FLTKLNEN-HSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFN----EECPR--LRIFSHPNVLPVLGACQSPPAPHP   84 (271)
T ss_dssp             EEEEEEEE-TTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHH----HHGGG--GCCCSCTTEECEEEEECTTTSSSC
T ss_pred             HHHHhcCC-CcceEEEEEE--CCeeEEEEEecccccCHHHHHHHH----HHHHH--HHhcCCCchhheEEEEccCCCCCe
Confidence            34444432 3356777765  344555544433333333332222    22222  2457899999999999877  789


Q ss_pred             EEEEEecCCCCcccceecC
Q psy11428        105 YLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus       105 ~~~~ey~~~~~l~~iih~d  123 (160)
                      +++|||+.+++|..++++.
T Consensus        85 ~lv~e~~~~~~L~~~l~~~  103 (271)
T 3kmu_A           85 TLITHWMPYGSLYNVLHEG  103 (271)
T ss_dssp             EEEEECCTTCBHHHHHHSC
T ss_pred             EeeecccCCCcHHHHHhhc
Confidence            9999999999998777653

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=96.67  E-value=0.0035  Score=47.57  Aligned_cols=73  Identities=18%  Similarity=0.253  Sum_probs=48.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.++..+.......       ..+.+..    -..|||++++++.+++...++++||||.|++|.
T Consensus        36 g~V~~~~~~~~~~~~avK~~~~~~~~~~~-------E~~~l~~----~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg~L~  104 (342)
T 2qr7_A           36 SVCKRCIHKATNMEFAVKIIDKSKRDPTE-------EIEILLR----YGQHPNIITLKDVYDDGKYVYVVTELMKGGELL  104 (342)
T ss_dssp             EEEEEEEETTTTEEEEEEEEETTTCCCHH-------HHHHHHH----HTTSTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             EEEEEEEECCCCCEEEEEEEEcccCChHH-------HHHHHHH----hcCCCCcCeEEEEEEcCCEEEEEEeCCCCCcHH
Confidence            56788777665655666655433221111       1111111    136999999999999999999999999999986


Q ss_pred             ccee
Q psy11428        118 RIVH  121 (160)
Q Consensus       118 ~iih  121 (160)
                      ..+.
T Consensus       105 ~~i~  108 (342)
T 2qr7_A          105 DKIL  108 (342)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6553

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=96.65  E-value=0.00062  Score=53.69  Aligned_cols=38  Identities=26%  Similarity=0.503  Sum_probs=34.6

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||+++++..+++...++++|||+.||+|..++.+
T Consensus       130 ~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~gg~L~~~l~~  167 (437)
T 4aw2_A          130 NGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSK  167 (437)
T ss_dssp             HSCTTTBCCEEEEEECSSEEEEEECCCTTCBHHHHHHT
T ss_pred             hCCCCCEEEEEEEEeeCCEEEEEEecCCCCcHHHHHHH
Confidence            47899999999999999999999999999999877654

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=96.65  E-value=0.008  Score=44.02  Aligned_cols=93  Identities=14%  Similarity=0.253  Sum_probs=56.2

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecC---CCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeeecC
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT---LSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKESD  101 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~~  101 (160)
                      .+.+.++.- ..+.+|.+.+...+..++.+......   ...............++..+  .++ .|||++++++.++..
T Consensus        20 ~~~~~lg~G-~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l--~~l~~h~~i~~~~~~~~~~   96 (298)
T 1phk_A           20 EPKEILGRG-VSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL--RKVSGHPNIIQLKDTYETN   96 (298)
T ss_dssp             EEEEEEEEC-SSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHH--HHHTTCTTBCCEEEEEECS
T ss_pred             ceeeeecCC-CceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHH--HHhcCCCCEeeeeeeeccC
Confidence            344444432 23567777765555555555443221   22233222222222333222  235 599999999999999


Q ss_pred             CeeEEEEEecCCCCccccee
Q psy11428        102 QHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus       102 ~~~~~~~ey~~~~~l~~iih  121 (160)
                      ...+++|||+.+++|..++.
T Consensus        97 ~~~~lv~e~~~~~~L~~~l~  116 (298)
T 1phk_A           97 TFFFLVFDLMKKGELFDYLT  116 (298)
T ss_dssp             SEEEEEEECCTTCBHHHHHH
T ss_pred             CeEEEEEeccCCCcHHHHHh
Confidence            99999999999999876654

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=96.65  E-value=0.0017  Score=53.00  Aligned_cols=89  Identities=18%  Similarity=0.150  Sum_probs=54.5

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +.+.++.. ..+.+|++.....+..++.+...+.........   .....+...  ...+.|||+++++..+++.+.+++
T Consensus       188 ~~~~LG~G-~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~---~~~~~E~~i--L~~l~hp~Iv~l~~~~~~~~~l~l  261 (576)
T 2acx_A          188 QYRVLGKG-GFGEVCACQVRATGKMYACKKLEKKRIKKRKGE---AMALNEKQI--LEKVNSRFVVSLAYAYETKDALCL  261 (576)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCH---HHHHHHHHH--HHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeC-CCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHH---HHHHHHHHH--HHHcCCCCEeeEEEEEeeCCEEEE
Confidence            34444432 336788887766666666555433211100000   011111111  134789999999999999999999


Q ss_pred             EEEecCCCCccccee
Q psy11428        107 VMEFCNGGDLARIVH  121 (160)
Q Consensus       107 ~~ey~~~~~l~~iih  121 (160)
                      +|||+.||+|...+.
T Consensus       262 VmEy~~gg~L~~~l~  276 (576)
T 2acx_A          262 VLTLMNGGDLKFHIY  276 (576)
T ss_dssp             EECCCCSCBHHHHHH
T ss_pred             EEEcCCCCcHHHHHH
Confidence            999999999976554

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=96.64  E-value=0.0031  Score=46.84  Aligned_cols=89  Identities=22%  Similarity=0.259  Sum_probs=53.0

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +.+.++.- ..+.+|.+.+...+..++.+.................   .+...+  ..+.|||++++++.+...+..++
T Consensus        38 ~~~~lg~G-~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~---~e~~~l--~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           38 LRRLVGRG-GMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQ---REARTA--GRLQEPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             EEEEEEEC-SSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHH---HHHHHH--TTCCCTTBCCEEEEEEETTEEEE
T ss_pred             EEEEEcCC-CCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHH---HHHHHH--hhcCCCCeeEEEEEEeeCCeEEE
Confidence            44444432 3356777766544444444433222122222211112   222222  35789999999999999999999


Q ss_pred             EEEecCCCCccccee
Q psy11428        107 VMEFCNGGDLARIVH  121 (160)
Q Consensus       107 ~~ey~~~~~l~~iih  121 (160)
                      +|||+.+++|..++.
T Consensus       112 v~e~~~~~~L~~~l~  126 (309)
T 2h34_A          112 DMRLINGVDLAAMLR  126 (309)
T ss_dssp             EEECCCCEEHHHHHH
T ss_pred             EEEecCCCCHHHHHH
Confidence            999999998876654

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=96.63  E-value=0.0052  Score=47.50  Aligned_cols=77  Identities=19%  Similarity=0.283  Sum_probs=50.0

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|.+.+...+..++.+......  ...... ..   .++..+  ..+.|||++++++.++....++++|||+.|++|
T Consensus        64 ~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~-~~---~E~~il--~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~L  135 (387)
T 1kob_A           64 FGVVHRCVEKATGRVFVAKFINTPY--PLDKYT-VK---NEISIM--NQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL  135 (387)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECCS--HHHHHH-HH---HHHHHH--TTCCSTTBCCEEEEEECSSEEEEEEECCCCCBH
T ss_pred             CEEEEEEEECCCCCEEEEEEecccc--hhhHHH-HH---HHHHHH--HhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCcH
Confidence            3567777776555555554433221  111111 11   222222  357899999999999999999999999999998


Q ss_pred             cccee
Q psy11428        117 ARIVH  121 (160)
Q Consensus       117 ~~iih  121 (160)
                      ...+.
T Consensus       136 ~~~l~  140 (387)
T 1kob_A          136 FDRIA  140 (387)
T ss_dssp             HHHTT
T ss_pred             HHHHH
Confidence            76554

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=96.62  E-value=0.0013  Score=50.70  Aligned_cols=79  Identities=18%  Similarity=0.270  Sum_probs=48.9

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCC-HHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|++.+...+..++.++..+.... ........    .+... -...+.|||+++++..+...+.++++|||+.|++|
T Consensus        52 g~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~----~e~~~-ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~gg~L  126 (373)
T 2r5t_A           52 GKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIM----SERNV-LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGEL  126 (373)
T ss_dssp             CEEEEEEETTTCCEEEEEEEEGGGBC-----------------C-CBCCCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred             eEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHH----HHHHH-HHHhCCCCCCCCEEEEEEeCCEEEEEEeCCCCCcH
Confidence            56788876555555565554443322 11111111    11111 12357899999999999999999999999999998


Q ss_pred             cccee
Q psy11428        117 ARIVH  121 (160)
Q Consensus       117 ~~iih  121 (160)
                      ...+.
T Consensus       127 ~~~l~  131 (373)
T 2r5t_A          127 FYHLQ  131 (373)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66554

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=96.61  E-value=0.0033  Score=46.39  Aligned_cols=40  Identities=23%  Similarity=0.467  Sum_probs=35.5

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      ..+.|||++++++.+...+..+++|||+.+++|..++...
T Consensus        81 ~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  120 (314)
T 2ivs_A           81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRES  120 (314)
T ss_dssp             TTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             hhCCCCceeeEEEEEecCCceEEEEeecCCCCHHHHHHHH
Confidence            3578999999999999999999999999999998877543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=96.58  E-value=0.0023  Score=46.64  Aligned_cols=78  Identities=24%  Similarity=0.353  Sum_probs=51.0

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHH----HHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSED----TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNG  113 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~  113 (160)
                      +.+|.+.+...+..++.+..........    ....+. ..+..+     ..+.|||++++++.+......+++|||+.+
T Consensus        19 g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~-~E~~~l-----~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   92 (283)
T 3bhy_A           19 AIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE-REVNIL-----REIRHPNIITLHDIFENKTDVVLILELVSG   92 (283)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHH-HHHHHH-----HHCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred             eEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHH-HHHHHH-----HhCCCCCeeehhheecCCCeEEEEEeecCC
Confidence            5678877765666666665443322211    111111 112222     247799999999999999999999999999


Q ss_pred             CCccccee
Q psy11428        114 GDLARIVH  121 (160)
Q Consensus       114 ~~l~~iih  121 (160)
                      ++|..++.
T Consensus        93 ~~L~~~l~  100 (283)
T 3bhy_A           93 GELFDFLA  100 (283)
T ss_dssp             CBHHHHHH
T ss_pred             CcHHHHHH
Confidence            99876653

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=96.58  E-value=0.0026  Score=46.14  Aligned_cols=79  Identities=16%  Similarity=0.367  Sum_probs=49.1

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|.+.+...+..++.+............   ...+..++..+  ..+.|||++++++.+......+++|||+.+++|.
T Consensus        25 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~---~~~~~~e~~~l--~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   99 (276)
T 2h6d_A           25 GKVKIGEHQLTGHKVAVKILNRQKIRSLDV---VGKIKREIQNL--KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELF   99 (276)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEHHHHHHTTC---HHHHHHHHHHH--HTCCCTTBCCEEEEEECSSEEEEEEECCCSCBHH
T ss_pred             eEEEEEEECCCCceEEEEEeccccccchhH---HHHHHHHHHHH--hcCCCCCEeEEEEEEecCCeEEEEEeccCCCcHH
Confidence            567777665555555555433211111000   11111222221  3578999999999999999999999999999987


Q ss_pred             ccee
Q psy11428        118 RIVH  121 (160)
Q Consensus       118 ~iih  121 (160)
                      .++.
T Consensus       100 ~~l~  103 (276)
T 2h6d_A          100 DYIC  103 (276)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            6653

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=96.56  E-value=0.002  Score=46.89  Aligned_cols=80  Identities=24%  Similarity=0.467  Sum_probs=50.0

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|.+.+...+..++.+............   ...+..++..  ...+.|||+++++..+...+..+++|||+.++++.
T Consensus        25 g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~---~~~~~~e~~~--l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   99 (278)
T 3cok_A           25 AGVYRAESIHTGLEVAIKMIDKKAMYKAGM---VQRVQNEVKI--HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMN   99 (278)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEHHHHHHTTC---HHHHHHHHHH--HTTBCCTTBCCEEEEEECSSEEEEEEECCTTEEHH
T ss_pred             eEEEEEEEccCCceEEEEEeehhhhhhhhH---HHHHHHHHHH--HHhCCCCCeEeEEEEEccCCeEEEEEecCCCCcHH
Confidence            567777765556556555443221111000   1111122222  23578999999999999999999999999998886


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++..
T Consensus       100 ~~l~~  104 (278)
T 3cok_A          100 RYLKN  104 (278)
T ss_dssp             HHHHT
T ss_pred             HHHhh
Confidence            65543

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=96.55  E-value=0.0017  Score=48.45  Aligned_cols=78  Identities=23%  Similarity=0.305  Sum_probs=51.0

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHH----HHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSED----TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNG  113 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~  113 (160)
                      +.+|.+.+...+..++.+..........    ....+. ..+..+     ..+.|||++++++.+......+++|||+.+
T Consensus        26 g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~-~E~~~l-----~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~   99 (321)
T 2a2a_A           26 AIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIE-REVSIL-----RQVLHHNVITLHDVYENRTDVVLILELVSG   99 (321)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHH-HHHHHH-----HHCCCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred             EEEEEEEECCCCeEEEEEEEecccccccccchhHHHHH-HHHHHH-----HhCCCCCcceEEEEEecCCEEEEEEEcCCC
Confidence            5678887766666666665443222110    011111 112222     247899999999999999999999999999


Q ss_pred             CCccccee
Q psy11428        114 GDLARIVH  121 (160)
Q Consensus       114 ~~l~~iih  121 (160)
                      ++|..++.
T Consensus       100 ~~L~~~l~  107 (321)
T 2a2a_A          100 GELFDFLA  107 (321)
T ss_dssp             CBHHHHHH
T ss_pred             CcHHHHHH
Confidence            99876654

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=96.55  E-value=0.0022  Score=51.97  Aligned_cols=90  Identities=20%  Similarity=0.184  Sum_probs=54.6

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +.+.++.- ..+.+|++.+...+..++.+...+.......   .......+...  ...++|||+++++..++....+++
T Consensus       189 ~~~~LG~G-~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~---~~~~~~~E~~i--L~~l~hp~Iv~l~~~~~~~~~l~l  262 (543)
T 3c4z_A          189 DFRVLGRG-GFGEVFACQMKATGKLYACKKLNKKRLKKRK---GYQGAMVEKKI--LAKVHSRFIVSLAYAFETKTDLCL  262 (543)
T ss_dssp             EEEEEEEC-SSSEEEEEEETTTCCEEEEEEEEHHHHHHTT---CHHHHHHHHHH--HHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeC-CCeEEEEEEECCCCcEEEEEEEEhHHhhhhH---HHHHHHHHHHH--HHhcCCCCEeeEEEEEeeCCEEEE
Confidence            33444432 3367888877655655665544332111000   00111111111  134789999999999999999999


Q ss_pred             EEEecCCCCcccceec
Q psy11428        107 VMEFCNGGDLARIVHR  122 (160)
Q Consensus       107 ~~ey~~~~~l~~iih~  122 (160)
                      +|||+.|++|...+..
T Consensus       263 VmE~~~gg~L~~~l~~  278 (543)
T 3c4z_A          263 VMTIMNGGDIRYHIYN  278 (543)
T ss_dssp             EECCCTTCBHHHHHHT
T ss_pred             EEEeccCCCHHHHHHH
Confidence            9999999999765543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=96.52  E-value=0.0057  Score=45.64  Aligned_cols=38  Identities=32%  Similarity=0.635  Sum_probs=34.3

Q ss_pred             hc-CCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 EL-HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l-~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++ .|||++++++.+...+..+++|||+.+++|..++..
T Consensus        81 ~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  119 (327)
T 1fvr_A           81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRK  119 (327)
T ss_dssp             TCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHT
T ss_pred             hccCCCchhhhceeeeeCCceEEEEecCCCCCHHHHHHh
Confidence            46 899999999999999999999999999999877654

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=96.51  E-value=0.009  Score=44.15  Aligned_cols=77  Identities=25%  Similarity=0.386  Sum_probs=49.7

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|.+.+...+..++.+...  .........+..    ++..+  .++.|||++++++.+......+++|||+.+++|.
T Consensus        24 g~V~~~~~~~~~~~va~K~~~--~~~~~~~~~~~~----E~~~l--~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~   95 (310)
T 3s95_A           24 GQAIKVTHRETGEVMVMKELI--RFDEETQRTFLK----EVKVM--RCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLR   95 (310)
T ss_dssp             EEEEEEEETTTCCEEEEEEES--CCCHHHHHHHHH----HHHHH--TTCCCTTBCCEEEEEEETTEEEEEEECCTTCBHH
T ss_pred             EEEEEEEECCCCcEEEEEEec--cCCHHHHHHHHH----HHHHH--HhCCCcCcccEEEEEecCCeeEEEEEecCCCcHH
Confidence            456777665545444443321  222223222222    22221  3578999999999999999999999999999997


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++..
T Consensus        96 ~~l~~  100 (310)
T 3s95_A           96 GIIKS  100 (310)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            76654

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=96.48  E-value=0.007  Score=45.25  Aligned_cols=77  Identities=23%  Similarity=0.381  Sum_probs=51.6

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|++.+...+..++.+..........  ..+.    .++..  ...+.|||+++++..+......+++|||+.+++|
T Consensus        58 ~g~V~~a~~~~~g~~vavK~~~~~~~~~~--~~~~----~E~~~--l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L  129 (321)
T 2c30_A           58 TGIVCLAREKHSGRQVAVKMMDLRKQQRR--ELLF----NEVVI--MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL  129 (321)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEETTTCCSH--HHHH----HHHHH--HTTCCCTTBCCEEEEEEETTEEEEEECCCCSCBH
T ss_pred             CeEEEEEEECCCCcEEEEEEEeccchhHH--HHHH----HHHHH--HHhCCCCCcceEEEEEEECCEEEEEEecCCCCCH
Confidence            36778887765666676665443222111  1111    12222  2357899999999999999999999999999998


Q ss_pred             cccee
Q psy11428        117 ARIVH  121 (160)
Q Consensus       117 ~~iih  121 (160)
                      ..++.
T Consensus       130 ~~~l~  134 (321)
T 2c30_A          130 TDIVS  134 (321)
T ss_dssp             HHHHT
T ss_pred             HHHHH
Confidence            76654

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=96.45  E-value=0.0035  Score=49.69  Aligned_cols=87  Identities=24%  Similarity=0.332  Sum_probs=54.4

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.++.- ..+.+|++.+...+..++.+..............+. ..+..+     .++.|||++++++.+.....+++
T Consensus        26 ~~~~lG~G-~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~-~E~~~l-----~~l~hpniv~~~~~~~~~~~~~l   98 (486)
T 3mwu_A           26 IVCMLGKG-SFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL-REVELL-----KKLDHPNIMKLFEILEDSSSFYI   98 (486)
T ss_dssp             EEEEEECC-SSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHH-HHHHHH-----HHCCCTTBCCEEEEEECSSEEEE
T ss_pred             EeEEEeec-CCEEEEEEEECCCCCEEEEEEEecccccchHHHHHH-HHHHHH-----HhCCCCCcCeEEEEEEcCCEEEE
Confidence            34444432 336788888766666666665432211111111111 112222     34789999999999999999999


Q ss_pred             EEEecCCCCcccce
Q psy11428        107 VMEFCNGGDLARIV  120 (160)
Q Consensus       107 ~~ey~~~~~l~~ii  120 (160)
                      +||||.|++|...+
T Consensus        99 v~e~~~~~~L~~~~  112 (486)
T 3mwu_A           99 VGELYTGGELFDEI  112 (486)
T ss_dssp             EECCCCSCBHHHHH
T ss_pred             EEEcCCCCcHHHHH
Confidence            99999999885544

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=96.44  E-value=0.01  Score=44.85  Aligned_cols=88  Identities=20%  Similarity=0.288  Sum_probs=56.6

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.++.- ..+.+|++.+...+..++.++.... .......    .+..++..+  ..+.|||++++++.+...+..++
T Consensus        37 ~~~~lg~G-~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~----~~~~E~~~l--~~l~h~~iv~~~~~~~~~~~~~l  108 (360)
T 3eqc_A           37 KISELGAG-NGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRN----QIIRELQVL--HECNSPYIVGFYGAFYSDGEISI  108 (360)
T ss_dssp             EEEEEEEC-SSCEEEEEEETTTCCEEEEEEEECC-CCHHHHH----HHHHHHGGG--GGCCCTTBCCEEEEEEETTEEEE
T ss_pred             eeeeecCC-CCeEEEEEEECCCCcEEEEEEeccc-cCHHHHH----HHHHHHHHH--HHCCCCCEEEEeEEEEECCEEEE
Confidence            33444432 3467888877655655665554332 2222222    222233322  35789999999999999999999


Q ss_pred             EEEecCCCCcccceec
Q psy11428        107 VMEFCNGGDLARIVHR  122 (160)
Q Consensus       107 ~~ey~~~~~l~~iih~  122 (160)
                      +|||+.+++|..++..
T Consensus       109 v~e~~~~~~L~~~l~~  124 (360)
T 3eqc_A          109 CMEHMDGGSLDQVLKK  124 (360)
T ss_dssp             EECCCTTCBHHHHHHH
T ss_pred             EEECCCCCCHHHHHHH
Confidence            9999999999766543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=96.42  E-value=0.0078  Score=44.60  Aligned_cols=67  Identities=12%  Similarity=0.083  Sum_probs=36.5

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecC
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESD  101 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~  101 (160)
                      +.+.++.- ..+.+|++.+...+..++.+...... .+.....+.    .++..+  .++.|||++++++.+...
T Consensus        10 ~~~~lG~G-~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~----~E~~~l--~~l~hpniv~~~~~~~~~   76 (332)
T 3qd2_B           10 PIQCMGRG-GFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVM----REVKAL--AKLEHPGIVRYFNAWLET   76 (332)
T ss_dssp             EEEEEECC--CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHH----HHHHHH--TSCCCTTBCCEEEEEEEC
T ss_pred             eeeEecCC-CCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHH----HHHHHH--HhCCCCCEeeEEEEEEEe
Confidence            44444432 33678888876666666666544322 111222121    222222  357899999999887544

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=96.42  E-value=0.019  Score=41.59  Aligned_cols=76  Identities=29%  Similarity=0.412  Sum_probs=48.4

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|++.+...+...+.+..........  ..+ ...+..+     ..+.|||++++++.+......+++|||+.++++
T Consensus        22 ~g~V~~~~~~~~~~~~a~k~~~~~~~~~~--~~~-~~E~~~l-----~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   93 (277)
T 3f3z_A           22 WGEVKIAVQKGTRIRRAAKKIPKYFVEDV--DRF-KQEIEIM-----KSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL   93 (277)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGCSCH--HHH-HHHHHHH-----HTCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred             CEEEEEEEeCCCCcEEEEEeehhhccchH--HHH-HHHHHHH-----HhCCCCCEeeEEEEEecCCeEEEEEeccCCCcH
Confidence            35677777655444444444333222211  111 1122222     357899999999999999999999999999988


Q ss_pred             ccce
Q psy11428        117 ARIV  120 (160)
Q Consensus       117 ~~ii  120 (160)
                      ...+
T Consensus        94 ~~~~   97 (277)
T 3f3z_A           94 FERV   97 (277)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6544

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=96.41  E-value=0.013  Score=42.85  Aligned_cols=78  Identities=23%  Similarity=0.305  Sum_probs=48.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec----CCeeEEEEEecCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES----DQHVYLVMEFCNG  113 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~----~~~~~~~~ey~~~  113 (160)
                      +.+|.+.+...+..++.+..............+.. .+..+     ..+.|||++++++.+..    ...++++|||+.+
T Consensus        40 g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~-e~~~l-----~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~  113 (290)
T 1t4h_A           40 KTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKE-EAEML-----KGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTS  113 (290)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHH-HHHHH-----TTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCS
T ss_pred             eEEEEeEecCCceEEEEEEecchhhCHHHHHHHHH-HHHHH-----HhCCCCCeeeeeeeeccccCCCceEEEEEEecCC
Confidence            45777766554444554444433344433332222 12222     35789999999988765    4668999999999


Q ss_pred             CCccccee
Q psy11428        114 GDLARIVH  121 (160)
Q Consensus       114 ~~l~~iih  121 (160)
                      ++|..++.
T Consensus       114 ~~L~~~l~  121 (290)
T 1t4h_A          114 GTLKTYLK  121 (290)
T ss_dssp             CBHHHHHH
T ss_pred             CCHHHHHH
Confidence            99976654

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=96.41  E-value=0.00084  Score=49.93  Aligned_cols=79  Identities=22%  Similarity=0.356  Sum_probs=49.0

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCe----eEEEEEecCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQH----VYLVMEFCNG  113 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~----~~~~~ey~~~  113 (160)
                      +.+|++.+...+..++.+.............   ..+..++..  ...+.|||++++++.+.....    .+++|||+.|
T Consensus        26 g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~---~~~~~E~~~--l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e~~~g  100 (311)
T 3ork_A           26 SEVHLARDLRDHRDVAVKVLRADLARDPSFY---LRFRREAQN--AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDG  100 (311)
T ss_dssp             EEEEEEEETTTTEEEEEEEECTTTTTSHHHH---HHHHHHHTT--CCCCCCTTBCCEEEEEEEEETTEEEEEEEEECCCE
T ss_pred             EEEEEEEECCCCceEEEEEeCccccCCHHHH---HHHHHHHHH--HHcCCCCCcceEEEeeeccCCCCcccEEEEecCCC
Confidence            5678887766555555554433222222211   112222222  245789999999998876554    3999999999


Q ss_pred             CCccccee
Q psy11428        114 GDLARIVH  121 (160)
Q Consensus       114 ~~l~~iih  121 (160)
                      ++|..+++
T Consensus       101 ~~L~~~l~  108 (311)
T 3ork_A          101 VTLRDIVH  108 (311)
T ss_dssp             EEHHHHHH
T ss_pred             CCHHHHHH
Confidence            99876654

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=96.39  E-value=0.014  Score=44.54  Aligned_cols=82  Identities=16%  Similarity=0.301  Sum_probs=51.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecC--CCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeeecCCeeEEEEEecCCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGT--LSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKESDQHVYLVMEFCNGG  114 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~~~~~~~~~ey~~~~  114 (160)
                      +.+|.+.....|..++.++.....  ............+..+...+  .++ .|||+++++..++.....+++|||+.|+
T Consensus       108 g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l--~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~g~  185 (365)
T 2y7j_A          108 SVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHIL--RQVAGHPHIITLIDSYESSSFMFLVFDLMRKG  185 (365)
T ss_dssp             EEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHH--HHHTTCTTBCCEEEEEEBSSEEEEEECCCTTC
T ss_pred             EEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHH--HHhcCCCCEeEEEEEEeeCCEEEEEEEeCCCC
Confidence            566777665555566655543322  22222222222222222222  234 7999999999999999999999999999


Q ss_pred             Cccccee
Q psy11428        115 DLARIVH  121 (160)
Q Consensus       115 ~l~~iih  121 (160)
                      ++..++.
T Consensus       186 ~L~~~l~  192 (365)
T 2y7j_A          186 ELFDYLT  192 (365)
T ss_dssp             BHHHHHH
T ss_pred             cHHHHHH
Confidence            9866553

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=96.37  E-value=0.0025  Score=46.42  Aligned_cols=79  Identities=24%  Similarity=0.284  Sum_probs=48.4

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|++.+...+..++.+............   ...+..++..+  ..+.|||++++++.+......+++|||+.++++
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~---~~~~~~e~~~l--~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l   96 (279)
T 3fdn_A           22 FGNVYLAREKQSKFILALKVLFKAQLEKAGV---EHQLRREVEIQ--SHLRHPNILRLYGYFHDATRVYLILEYAPLGTV   96 (279)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHHTC---HHHHHHHHHHH--TTCCCTTBCCEEEEEECSSEEEEEECCCTTEEH
T ss_pred             CeEEEEEEEccCCcEEEEEEEeccccchhhH---HHHHHHHHHHH--HcCCCCCCcchhheEecCCEEEEEEecCCCCcH
Confidence            3567777765544445544433221111111   11122222222  357899999999999999999999999999888


Q ss_pred             ccce
Q psy11428        117 ARIV  120 (160)
Q Consensus       117 ~~ii  120 (160)
                      ...+
T Consensus        97 ~~~l  100 (279)
T 3fdn_A           97 YREL  100 (279)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5544

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=96.36  E-value=0.011  Score=43.29  Aligned_cols=77  Identities=26%  Similarity=0.411  Sum_probs=48.8

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|++.+...+...+.+......... ....+ ...+..+     ..+.|||++++++.+......+++|||+.++++
T Consensus        35 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~-~~E~~~l-----~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L  107 (285)
T 3is5_A           35 FGDVHLVEERSSGLERVIKTINKDRSQV-PMEQI-EAEIEVL-----KSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL  107 (285)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEGGGCCS-CHHHH-HHHHHHH-----HTCCCTTBCCEEEEEECSSEEEEEECCCSCCBH
T ss_pred             CeEEEEEEEccCCceEEEEEeeccccch-hHHHH-HHHHHHH-----HhCCCchHHhHHHheecCCeEEEEEEeCCCCcH
Confidence            3567777765555555544433322111 11111 1112222     357899999999999999999999999999988


Q ss_pred             ccce
Q psy11428        117 ARIV  120 (160)
Q Consensus       117 ~~ii  120 (160)
                      ...+
T Consensus       108 ~~~l  111 (285)
T 3is5_A          108 LERI  111 (285)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6554

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=96.35  E-value=0.024  Score=40.89  Aligned_cols=88  Identities=24%  Similarity=0.321  Sum_probs=55.8

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +.+.++.. ..+.+|.+.+...+..++.+......... ....+ ...+..+     ..+.|||++++++.+...+..++
T Consensus        11 ~~~~lg~G-~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~-~~e~~~l-----~~l~h~~i~~~~~~~~~~~~~~l   82 (276)
T 2yex_A           11 LVQTLGEG-AYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENI-KKEICIN-----KMLNHENVVKFYGHRREGNIQYL   82 (276)
T ss_dssp             EEEEEEEC-SSSEEEEEEETTTCCEEEEEEEEGGGCTT-HHHHH-HHHHHHH-----HTCCCTTBCCEEEEEEETTEEEE
T ss_pred             EEEEeecC-CCcEEEEEEECCCCcEEEEEEeeeccchh-hhHHH-HHHHHHH-----HhcCCCCceeeeeEEEcCCEEEE
Confidence            44444432 33678888776666666655543322211 11111 1112222     34789999999999999999999


Q ss_pred             EEEecCCCCcccceec
Q psy11428        107 VMEFCNGGDLARIVHR  122 (160)
Q Consensus       107 ~~ey~~~~~l~~iih~  122 (160)
                      +|||+.+++|..++..
T Consensus        83 v~e~~~~~~L~~~l~~   98 (276)
T 2yex_A           83 FLEYCSGGELFDRIEP   98 (276)
T ss_dssp             EEECCTTEEGGGGSBT
T ss_pred             EEEecCCCcHHHHHhh
Confidence            9999999998777654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=96.34  E-value=0.0018  Score=49.16  Aligned_cols=87  Identities=20%  Similarity=0.338  Sum_probs=52.0

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +.+.++.. ..+.+|++.+...+..++.+.............   ..+..++..+  ..+.|||++++++.+.....+++
T Consensus        13 i~~~lG~G-~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~---~~~~~E~~~l--~~l~hpnIv~l~~~~~~~~~~~l   86 (336)
T 3h4j_B           13 IRETLGEG-SFGKVKLATHYKTQQKVALKFISRQLLKKSDMH---MRVEREISYL--KLLRHPHIIKLYDVITTPTDIVM   86 (336)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCS---HHHHHHHHHH--TTCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEecC-CCeEEEEEEECCCCCEEEEEEEehHHccchhHH---HHHHHHHHHH--HhCCCCCCCeEEEEEEeCCEEEE
Confidence            34444432 336788888766666666665433211111100   1111222222  35789999999999999999999


Q ss_pred             EEEecCCCCcccce
Q psy11428        107 VMEFCNGGDLARIV  120 (160)
Q Consensus       107 ~~ey~~~~~l~~ii  120 (160)
                      +|||+ +|++...+
T Consensus        87 v~E~~-~g~l~~~l   99 (336)
T 3h4j_B           87 VIEYA-GGELFDYI   99 (336)
T ss_dssp             EECCC-CEEHHHHH
T ss_pred             EEECC-CCcHHHHH
Confidence            99999 56665443

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=96.30  E-value=0.022  Score=42.48  Aligned_cols=73  Identities=14%  Similarity=0.095  Sum_probs=43.3

Q ss_pred             HHHHHHHHHHHHhhcCCc---ceEEEeeee-ecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          8 SIVLTRHILKELTELHHE---NVVELLHCK-ESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~---~iv~l~~~~-~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      .......|.++|+.+.+.   .+.+.+... ...+..|++|++++|..+....  ...++......+..++...+..+|
T Consensus        52 ~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l~~~~--~~~l~~~~~~~~~~~lg~~La~LH  128 (306)
T 3tdw_A           52 GADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQILGEDG--MAVLPDDAKDRLALQLAEFMNELS  128 (306)
T ss_dssp             HHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEECHHHH--HTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeECchhh--hhhCCHHHHHHHHHHHHHHHHHHh
Confidence            445677888888888642   244444444 2455678999999987765311  122344444445555555555554

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=96.29  E-value=0.011  Score=44.19  Aligned_cols=75  Identities=25%  Similarity=0.280  Sum_probs=49.6

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeeecCCeeEEEEEecCCCC
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKESDQHVYLVMEFCNGGD  115 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~~~~~~~~~ey~~~~~  115 (160)
                      .+.+|++.+...+..++.+......     .... ...+..++     .+ .|||++++++.+......+++|||+.|++
T Consensus        24 ~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~-~~e~~~l~-----~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~   92 (325)
T 3kn6_A           24 FSICRKCVHKKSNQAFAVKIISKRM-----EANT-QKEITALK-----LCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE   92 (325)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGG-----HHHH-HHHHHHHH-----HTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred             CeEEEEEEECCCCCEEEEEEEChhh-----hhhH-HHHHHHHH-----HhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence            3567887776656566665543321     1111 11222222     24 49999999999999999999999999999


Q ss_pred             cccceec
Q psy11428        116 LARIVHR  122 (160)
Q Consensus       116 l~~iih~  122 (160)
                      |...+..
T Consensus        93 L~~~l~~   99 (325)
T 3kn6_A           93 LFERIKK   99 (325)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHh
Confidence            8766544

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=96.26  E-value=0.017  Score=41.63  Aligned_cols=37  Identities=22%  Similarity=0.445  Sum_probs=33.1

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ++.|||+++++..+......+++|||+.++++..++.
T Consensus        59 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   95 (268)
T 3sxs_A           59 KLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLR   95 (268)
T ss_dssp             HCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHH
T ss_pred             hCCCCCEeeEEEEEccCCceEEEEEccCCCcHHHHHH
Confidence            4779999999999999999999999999998876554

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=96.26  E-value=0.016  Score=42.65  Aligned_cols=78  Identities=23%  Similarity=0.253  Sum_probs=49.2

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|++.+...+..++.+..............+. ..+..+     .++.|||++++++.+...+..+++|||+.++++
T Consensus        16 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~-~E~~~l-----~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l   89 (311)
T 4agu_A           16 YGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIAL-REIRML-----KQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVL   89 (311)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHH-HHHHHH-----HHCCCTTBCCEEEEEEETTEEEEEEECCSEEHH
T ss_pred             CeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHH-HHHHHH-----HhCCCCCccchhheeecCCeEEEEEEeCCCchH
Confidence            35678877755555555554333222222222121 222222     347899999999999999999999999999877


Q ss_pred             ccce
Q psy11428        117 ARIV  120 (160)
Q Consensus       117 ~~ii  120 (160)
                      ..++
T Consensus        90 ~~~~   93 (311)
T 4agu_A           90 HELD   93 (311)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5443

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=96.26  E-value=0.021  Score=43.27  Aligned_cols=76  Identities=21%  Similarity=0.383  Sum_probs=46.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+..............   .+..++..+  .++.|||+++++..+...+..+++|||+.| ++.
T Consensus        68 g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~---~~~~E~~~l--~~l~hpniv~~~~~~~~~~~~~lv~e~~~g-~l~  141 (348)
T 1u5q_A           68 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ---DIIKEVRFL--QKLRHPNTIQYRGCYLREHTAWLVMEYCLG-SAS  141 (348)
T ss_dssp             EEEEEEEETTTTEEEEEEEEESCSSCHHHHHH---HHHHHHHHH--HHCCCTTBCCEEEEEEETTEEEEEEECCSE-EHH
T ss_pred             EEEEEEEEccCCeEEEEEEEccccccchHHHH---HHHHHHHHH--HhCCCCCEeeEEEEEEECCeEEEEEecCCC-CHH
Confidence            56777776555555555544332222222211   122222222  357899999999999999999999999975 443


Q ss_pred             cc
Q psy11428        118 RI  119 (160)
Q Consensus       118 ~i  119 (160)
                      ..
T Consensus       142 ~~  143 (348)
T 1u5q_A          142 DL  143 (348)
T ss_dssp             HH
T ss_pred             HH
Confidence            33

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=96.23  E-value=0.024  Score=41.43  Aligned_cols=72  Identities=26%  Similarity=0.276  Sum_probs=47.6

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCC
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGG  114 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~  114 (160)
                      .+.+|++.+...+..++.+.................    ++..  ..++.|||++++++.+...+.++++|||+.++
T Consensus        15 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~----E~~~--l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   86 (292)
T 3o0g_A           15 YGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR----EICL--LKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD   86 (292)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHH----HHHH--HTTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             CeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHH----HHHH--HhcCCCCCEeeEEeEEEeCCEEEEEEecCCCC
Confidence            367888887666666666654433333222222222    2222  13578999999999999999999999999864

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=96.20  E-value=0.0014  Score=51.36  Aligned_cols=78  Identities=22%  Similarity=0.315  Sum_probs=47.7

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCC-CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCC
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD  115 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~  115 (160)
                      .+.+|++.+...+..++.++...... .....    .....+...  ...+.|||+++++..+...+.++++|||+.+++
T Consensus       161 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~----~~~~~e~~~--l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~~~  234 (446)
T 4ejn_A          161 FGKVILVKEKATGRYYAMKILKKEVIVAKDEV----AHTLTENRV--LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE  234 (446)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEHHHHC-----------------C--CCCCSCTTSCCEEEEEEETTEEEEEECCCSSCB
T ss_pred             CEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHH----HHHHHHHHH--HHhCCCCeEeeEEEEEeeCCEEEEEEeeCCCCc
Confidence            35677777766665666554432211 11111    111112222  245789999999999999999999999999998


Q ss_pred             cccce
Q psy11428        116 LARIV  120 (160)
Q Consensus       116 l~~ii  120 (160)
                      |...+
T Consensus       235 L~~~l  239 (446)
T 4ejn_A          235 LFFHL  239 (446)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            85544

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=96.19  E-value=0.011  Score=44.64  Aligned_cols=80  Identities=24%  Similarity=0.211  Sum_probs=50.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.++...   ...... ........++.+....+.|||++++++.+...+..+++|||+ +++|.
T Consensus        49 g~V~~~~~~~~~~~vavK~~~~---~~~~~~-~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~-~~~L~  123 (360)
T 3llt_A           49 GRVLLCQHIDNKKYYAVKVVRN---IKKYTR-SAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLY  123 (360)
T ss_dssp             EEEEEEEETTTCCEEEEEEECS---CHHHHH-HHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC-CCBHH
T ss_pred             eEEEEEEECCCCeEEEEEEecc---chhhhh-hhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC-CCCHH
Confidence            5677777655555555544321   111111 112223344444434457999999999999999999999999 88886


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++.+
T Consensus       124 ~~~~~  128 (360)
T 3llt_A          124 EIITR  128 (360)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            66544

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=96.18  E-value=0.0091  Score=44.63  Aligned_cols=38  Identities=26%  Similarity=0.458  Sum_probs=34.6

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||++++++.+...+..+++|||+.+++|..++..
T Consensus       106 ~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  143 (343)
T 1luf_A          106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRS  143 (343)
T ss_dssp             TCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             hCCCCCEEEEEEEEccCCceEEEEecCCCCcHHHHHHH
Confidence            57899999999999999999999999999999877654

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=96.17  E-value=0.015  Score=42.78  Aligned_cols=75  Identities=32%  Similarity=0.431  Sum_probs=48.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+........  .... ....+..+     ..+.|||++++++.+......+++|||+.+++|.
T Consensus        23 g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~-~~~e~~~l-----~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   94 (304)
T 2jam_A           23 SEVFLVKQRLTGKLFALKCIKKSPAF--RDSS-LENEIAVL-----KKIKHENIVTLEDIYESTTHYYLVMQLVSGGELF   94 (304)
T ss_dssp             EEEEEEEETTTCCEEEEEEEECC--------H-HHHHHHHH-----HHCCCTTBCCEEEEEECSSEEEEEECCCCSCBHH
T ss_pred             ceEEEEEECCCCCEEEEEEEeccccc--chHH-HHHHHHHH-----HhCCCCCeeehhhhcccCCEEEEEEEcCCCccHH
Confidence            56788877666666665544332111  1111 11122222     3478999999999999999999999999999886


Q ss_pred             cce
Q psy11428        118 RIV  120 (160)
Q Consensus       118 ~ii  120 (160)
                      ..+
T Consensus        95 ~~l   97 (304)
T 2jam_A           95 DRI   97 (304)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=96.16  E-value=0.025  Score=42.26  Aligned_cols=77  Identities=25%  Similarity=0.254  Sum_probs=49.9

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|.+.+...+..++.+..............+. ..+..+     ..+.|||++++++.+......+++|||+.++.+
T Consensus        38 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~-~E~~~l-----~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~l  111 (331)
T 4aaa_A           38 YGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAM-REIKLL-----KQLRHENLVNLLEVCKKKKRWYLVFEFVDHTIL  111 (331)
T ss_dssp             TSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHH-HHHHHH-----HHCCCTTBCCEEEEEEETTEEEEEEECCSEEHH
T ss_pred             CEEEEEEEECCCCceEEEEEEecCCCchHHHHHHH-HHHHHH-----hhCCCCCEeeEEEEeecCCEEEEEEecCCcchH
Confidence            36788887765555566554433322222222221 222222     347899999999999999999999999998877


Q ss_pred             ccc
Q psy11428        117 ARI  119 (160)
Q Consensus       117 ~~i  119 (160)
                      ..+
T Consensus       112 ~~~  114 (331)
T 4aaa_A          112 DDL  114 (331)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=96.16  E-value=0.003  Score=46.09  Aligned_cols=37  Identities=24%  Similarity=0.587  Sum_probs=32.8

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.|||++++++.+...+..+++|||+.++++...+.
T Consensus        70 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  106 (284)
T 2vgo_A           70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQ  106 (284)
T ss_dssp             TCCCTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHH
T ss_pred             cCCCCCEeeEEEEEEcCCEEEEEEEeCCCCcHHHHHH
Confidence            5789999999999999999999999999988865543

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=96.13  E-value=0.0058  Score=46.61  Aligned_cols=35  Identities=31%  Similarity=0.615  Sum_probs=32.0

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      +||++++++..++..+.++++|||+.|++|...+.
T Consensus        79 ~hp~iv~l~~~~~~~~~~~lv~E~~~gg~L~~~l~  113 (353)
T 2i0e_A           79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQ  113 (353)
T ss_dssp             CCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHH
T ss_pred             CCCEEeeEEEEEEcCCEEEEEEeCCCCCcHHHHHH
Confidence            79999999999999999999999999999976554

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=96.13  E-value=0.016  Score=42.18  Aligned_cols=38  Identities=24%  Similarity=0.290  Sum_probs=34.1

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++.|||++++++.+...+..+++|||+.+++|..++..
T Consensus        68 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  105 (289)
T 4fvq_A           68 KLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKK  105 (289)
T ss_dssp             TSCCTTBCCEEEEECCTTCCEEEEECCTTCBHHHHHHH
T ss_pred             hCCCCCEeEEEEEEEeCCCCEEEEECCCCCCHHHHHHh
Confidence            57899999999999999999999999999999776654

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=96.12  E-value=0.0097  Score=45.50  Aligned_cols=39  Identities=23%  Similarity=0.556  Sum_probs=34.9

Q ss_pred             hc-CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         85 EL-HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        85 ~l-~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      .+ .|||++++++.+...+.++++|||+.+++|..++...
T Consensus       142 ~l~~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  181 (370)
T 2psq_A          142 MIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR  181 (370)
T ss_dssp             HSCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             HhcCCCCEeeEEEEEccCCCEEEEEEcCCCCCHHHHHHhh
Confidence            45 7999999999999999999999999999998877654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=96.12  E-value=0.017  Score=41.64  Aligned_cols=38  Identities=26%  Similarity=0.400  Sum_probs=33.8

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++.|||++++++.+......+++|||+.++++..++..
T Consensus        61 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~   98 (269)
T 4hcu_A           61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRT   98 (269)
T ss_dssp             TCCCTTBCCEEEEECSSSSEEEEEECCTTCBHHHHHHT
T ss_pred             hCCCCCEeeEEEEEecCCceEEEEEeCCCCcHHHHHHh
Confidence            47899999999999999999999999999998776643

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.12  E-value=0.012  Score=43.54  Aligned_cols=74  Identities=12%  Similarity=0.120  Sum_probs=43.4

Q ss_pred             HHHHHHHHHHHHhhcC-Ccc--eEEEeeeeecCC---cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHh
Q psy11428          8 SIVLTRHILKELTELH-HEN--VVELLHCKESDQ---HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF   81 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~-h~~--iv~l~~~~~~~~---~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   81 (160)
                      .......|.+.++.+. +..  +.+++.......   ..|++|++++|..+....  ...++......+..++...+..+
T Consensus        53 ~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~~l~~~~--~~~l~~~~~~~~~~~l~~~la~L  130 (304)
T 3sg8_A           53 GSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGVPLTPLL--LNNLPKQSQNQAAKDLARFLSEL  130 (304)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCEECCHHH--HHTSCHHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCeECCccc--cccCCHHHHHHHHHHHHHHHHHH
Confidence            4556778888888773 322  334444332222   348899999997765321  12344445555666676666666


Q ss_pred             hh
Q psy11428         82 QV   83 (160)
Q Consensus        82 ~~   83 (160)
                      |.
T Consensus       131 H~  132 (304)
T 3sg8_A          131 HS  132 (304)
T ss_dssp             HH
T ss_pred             Hc
Confidence            53

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=96.12  E-value=0.0096  Score=46.35  Aligned_cols=82  Identities=20%  Similarity=0.274  Sum_probs=47.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHH--HHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDT--IRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD  115 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~  115 (160)
                      +.+|++.+...+..++.++..........  .......+..++..  ..++.|||+++++..+.. ...+++|||+.+++
T Consensus       149 g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~--l~~l~hpniv~l~~~~~~-~~~~lv~e~~~~g~  225 (419)
T 3i6u_A          149 GEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEI--LKKLNHPCIIKIKNFFDA-EDYYIVLELMEGGE  225 (419)
T ss_dssp             SEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHH--HHHCCCTTBCCCCEEEES-SEEEEEEECCTTCB
T ss_pred             eEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHH--HHhCCCCCEeeEEEEEec-CceEEEEEcCCCCc
Confidence            56777777666666666654432211000  00000001111211  135789999999998764 55799999999999


Q ss_pred             cccceec
Q psy11428        116 LARIVHR  122 (160)
Q Consensus       116 l~~iih~  122 (160)
                      |...+.+
T Consensus       226 L~~~l~~  232 (419)
T 3i6u_A          226 LFDKVVG  232 (419)
T ss_dssp             GGGGTSS
T ss_pred             HHHHHhc
Confidence            9766543

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=96.11  E-value=0.016  Score=43.41  Aligned_cols=37  Identities=19%  Similarity=0.416  Sum_probs=33.7

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.|||++++++.+...+..+++|||+.+++|..++.
T Consensus       106 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  142 (325)
T 3kul_A          106 QFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLR  142 (325)
T ss_dssp             TCCCTTBCCEEEEECGGGCCEEEEECCTTCBHHHHHH
T ss_pred             hCCCCCCCcEEEEEEeCCccEEEeeCCCCCcHHHHHH
Confidence            5789999999999999999999999999999977664

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=96.10  E-value=0.0083  Score=44.96  Aligned_cols=39  Identities=36%  Similarity=0.660  Sum_probs=34.7

Q ss_pred             hc-CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         85 EL-HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        85 ~l-~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      ++ .|||++++++.+...+..+++|||+.+++|..++...
T Consensus       104 ~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  143 (344)
T 1rjb_A          104 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK  143 (344)
T ss_dssp             HHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTT
T ss_pred             hhcCCCCeeeEEEEEeeCCccEEEEecCCCCcHHHHHhhc
Confidence            45 7999999999999999999999999999998877543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=96.10  E-value=0.011  Score=44.26  Aligned_cols=37  Identities=27%  Similarity=0.596  Sum_probs=32.9

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.|||+++++..+...+.++++|||+.|++|...+.
T Consensus        77 ~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  113 (327)
T 3a62_A           77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE  113 (327)
T ss_dssp             HCCCTTBCCEEEEEECSSCEEEEEECCTTEEHHHHHH
T ss_pred             hCCCCCccceeEEEEcCCEEEEEEeCCCCCcHHHHHH
Confidence            4789999999999999999999999999998865543

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=96.10  E-value=0.043  Score=40.63  Aligned_cols=77  Identities=21%  Similarity=0.117  Sum_probs=46.1

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|++.+...+..++.+.................++...     .....|||+++++..+......+++|||+ ++++
T Consensus        70 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~-----~~~~~h~~iv~l~~~~~~~~~~~lv~e~~-~~~L  143 (311)
T 3p1a_A           70 YGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSH-----EKVGQHPCCVRLEQAWEEGGILYLQTELC-GPSL  143 (311)
T ss_dssp             TEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHH-----HHHCCCTTBCCEEEEEEETTEEEEEEECC-CCBH
T ss_pred             CeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHH-----HHhcCCCcEEEEEEEEEeCCEEEEEEecc-CCCH
Confidence            35677777655555555554322222222222222222111     12248999999999999999999999999 4455


Q ss_pred             ccc
Q psy11428        117 ARI  119 (160)
Q Consensus       117 ~~i  119 (160)
                      ...
T Consensus       144 ~~~  146 (311)
T 3p1a_A          144 QQH  146 (311)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=96.05  E-value=0.019  Score=41.88  Aligned_cols=77  Identities=19%  Similarity=0.261  Sum_probs=49.7

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|.+.+...+..++.+.......  .....+ ...+..+     ..+.|||++++++.+......+++|||+.+++|.
T Consensus        36 g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~-~~e~~~l-----~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~  107 (295)
T 2clq_A           36 GIVYAGRDLSNQVRIAIKEIPERDS--RYSQPL-HEEIALH-----KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS  107 (295)
T ss_dssp             SEEEEEEETTTCCEEEEEEEECCCC-----HHH-HHHHHHH-----HTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred             EEEEEEEECCCCeEEEEEEccCCch--HHHHHH-HHHHHHH-----HhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence            5778887755555555554332211  111111 1112222     3478999999999999999999999999999887


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++..
T Consensus       108 ~~l~~  112 (295)
T 2clq_A          108 ALLRS  112 (295)
T ss_dssp             HHHHH
T ss_pred             HHHHh
Confidence            76654

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=96.03  E-value=0.024  Score=41.52  Aligned_cols=37  Identities=35%  Similarity=0.698  Sum_probs=31.4

Q ss_pred             hhcCCCceeEEeeeeec--CCeeEEEEEecCCCCcccce
Q psy11428         84 KELHHENVVELLHCKES--DQHVYLVMEFCNGGDLARIV  120 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~--~~~~~~~~ey~~~~~l~~ii  120 (160)
                      .++.|||++++++.+..  ...++++|||+.++++..+.
T Consensus        91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~  129 (298)
T 2zv2_A           91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVP  129 (298)
T ss_dssp             HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSS
T ss_pred             HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHh
Confidence            35789999999999886  67899999999999886543

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=96.01  E-value=0.016  Score=43.06  Aligned_cols=78  Identities=24%  Similarity=0.407  Sum_probs=48.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC--eeEEEEEecCCCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ--HVYLVMEFCNGGD  115 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~--~~~~~~ey~~~~~  115 (160)
                      +.+|++.+...+..++.+.......... ...+. ..+..+     ..+.|||+++++..+....  ..+++|||+.+++
T Consensus        23 g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~-~E~~~l-----~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~   95 (319)
T 4euu_A           23 ANVFRGRHKKTGDLFAIKVFNNISFLRP-VDVQM-REFEVL-----KKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGS   95 (319)
T ss_dssp             EEEEEEEETTTCCEEEEEEECGGGGGSC-HHHHH-HHHHHH-----HHCCCTTBCCEEEEEECTTTCCEEEEEECCTTCB
T ss_pred             eEEEEEEECCCCcEEEEEEeccccccch-HHHHH-HHHHHH-----HhcCCCCcceEEEEeecCCCceEEEEEeCCCCCC
Confidence            5677777655555565554432221111 11111 112222     3478999999999887655  7899999999999


Q ss_pred             cccceec
Q psy11428        116 LARIVHR  122 (160)
Q Consensus       116 l~~iih~  122 (160)
                      |..++..
T Consensus        96 L~~~l~~  102 (319)
T 4euu_A           96 LYTVLEE  102 (319)
T ss_dssp             HHHHHHS
T ss_pred             HHHHHHH
Confidence            9776654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=95.99  E-value=0.021  Score=41.65  Aligned_cols=88  Identities=25%  Similarity=0.364  Sum_probs=55.8

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeE
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY  105 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~  105 (160)
                      .+++.++.- ..+.+|++.+...+..++.+..............+..+ +..+     .++.|||++++++.+......+
T Consensus        25 ~i~~~lg~G-~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e-~~~l-----~~l~h~~i~~~~~~~~~~~~~~   97 (287)
T 2wei_A           25 NIVCMLGKG-SFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE-VELL-----KKLDHPNIMKLFEILEDSSSFY   97 (287)
T ss_dssp             EEEEEEEEE-TTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHH-HHHH-----HTCCCTTBCCEEEEEECSSEEE
T ss_pred             eeeEEEcCC-CCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHH-HHHH-----HhccCCCccEEEEEEeCCCeEE
Confidence            355555533 33678888776666666666544332221112222211 1222     3578999999999999999999


Q ss_pred             EEEEecCCCCcccce
Q psy11428        106 LVMEFCNGGDLARIV  120 (160)
Q Consensus       106 ~~~ey~~~~~l~~ii  120 (160)
                      ++|||+.++++...+
T Consensus        98 lv~e~~~~~~L~~~l  112 (287)
T 2wei_A           98 IVGELYTGGELFDEI  112 (287)
T ss_dssp             EEECCCCSCBHHHHH
T ss_pred             EEEEccCCCCHHHHH
Confidence            999999999885544

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=95.98  E-value=0.0068  Score=46.95  Aligned_cols=74  Identities=15%  Similarity=0.245  Sum_probs=46.6

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec----CCeeEEEEEecC
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES----DQHVYLVMEFCN  112 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~----~~~~~~~~ey~~  112 (160)
                      .+.+|++.+...+..++.++....   ..    ...+ +..+    .....|||++++++.++.    ...++++||||.
T Consensus        75 ~g~V~~~~~~~~~~~vAiK~~~~~---~~----~~~E-~~~~----~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~  142 (400)
T 1nxk_A           75 NGKVLQIFNKRTQEKFALKMLQDC---PK----ARRE-VELH----WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD  142 (400)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECS---HH----HHHH-HHHH----HHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred             CeEEEEEEECCCCCEEEEEEeCcc---hh----HHHH-HHHH----HHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence            356777776555555665544321   11    1111 1111    123579999999998875    667999999999


Q ss_pred             CCCcccceec
Q psy11428        113 GGDLARIVHR  122 (160)
Q Consensus       113 ~~~l~~iih~  122 (160)
                      |++|..++..
T Consensus       143 gg~L~~~l~~  152 (400)
T 1nxk_A          143 GGELFSRIQD  152 (400)
T ss_dssp             SEEHHHHHHC
T ss_pred             CCcHHHHHHH
Confidence            9998776643

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=95.96  E-value=0.015  Score=46.23  Aligned_cols=38  Identities=29%  Similarity=0.535  Sum_probs=34.2

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++.|||+++++..+.....++++|||+.+++|..++..
T Consensus       272 ~l~hpniv~l~~~~~~~~~~~lv~E~~~~g~L~~~l~~  309 (495)
T 1opk_A          272 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE  309 (495)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             hcCCCCEeeEEEEEecCCcEEEEEEccCCCCHHHHHHh
Confidence            57899999999999999999999999999999777653

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=95.96  E-value=0.012  Score=44.88  Aligned_cols=38  Identities=21%  Similarity=0.510  Sum_probs=34.1

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||+++++..+......+++|||+.|++|..++..
T Consensus       130 ~l~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  167 (367)
T 3l9p_A          130 KFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE  167 (367)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHH
T ss_pred             hCCCCCCCeEEEEEecCCCCEEEEEeCCCCCHHHHHHh
Confidence            47899999999999999999999999999999776643

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=95.95  E-value=0.031  Score=41.42  Aligned_cols=40  Identities=18%  Similarity=0.346  Sum_probs=35.5

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      ..+.|||++++++.+...+..+++|||+.+++|..++.+.
T Consensus        90 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  129 (321)
T 2qkw_B           90 SFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS  129 (321)
T ss_dssp             GSCCCTTBCCEEEECCCTTCCEEEEECCTTCBTGGGSSSS
T ss_pred             HhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcHHHHHhcc
Confidence            3578999999999999999999999999999998777543

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=95.95  E-value=0.0038  Score=46.63  Aligned_cols=37  Identities=35%  Similarity=0.616  Sum_probs=33.0

Q ss_pred             hc-CCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 EL-HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l-~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+ .|||++++++.+......+++|||+.+++|..++.
T Consensus       105 ~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  142 (333)
T 2i1m_A          105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLR  142 (333)
T ss_dssp             HHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHH
T ss_pred             hhcCCCCeeeEEEEEecCCceEEEEecCCCCcHHHHHH
Confidence            35 79999999999999999999999999999877654

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=95.87  E-value=0.019  Score=42.54  Aligned_cols=38  Identities=32%  Similarity=0.477  Sum_probs=33.9

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ..+.|||++++++.+...+..+++|||+.+++|..++.
T Consensus        83 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  120 (322)
T 1p4o_A           83 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR  120 (322)
T ss_dssp             GGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHH
T ss_pred             HhcCCCCEeeeEEEEccCCccEEEEEeCCCCcHHHHHH
Confidence            35789999999999999999999999999999977654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=95.81  E-value=0.019  Score=41.65  Aligned_cols=37  Identities=22%  Similarity=0.476  Sum_probs=33.2

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ++.|||++++++.+...+..+++|||+.++++..++.
T Consensus        75 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  111 (283)
T 3gen_A           75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLR  111 (283)
T ss_dssp             TCCCTTBCCEEEEECSSSSEEEEECCCTTCBHHHHHH
T ss_pred             cCCCCCEeeEEEEEecCCCeEEEEeccCCCcHHHHHH
Confidence            4789999999999999999999999999999876654

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=95.80  E-value=0.0077  Score=45.17  Aligned_cols=35  Identities=11%  Similarity=0.320  Sum_probs=32.7

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARI  119 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~i  119 (160)
                      ++.|||++++++.+...+..+++|||+.+++|..+
T Consensus        99 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~  133 (348)
T 2pml_X           99 DIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF  133 (348)
T ss_dssp             TCCCTTBCCCSEEEESSSEEEEEEECCTTCBSSEE
T ss_pred             hCCCCCcceEEEEEeeCCeEEEEEeccCCCcHHHH
Confidence            57899999999999999999999999999999776

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=95.77  E-value=0.012  Score=43.26  Aligned_cols=74  Identities=15%  Similarity=0.245  Sum_probs=48.1

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec----CCeeEEEEEecC
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES----DQHVYLVMEFCN  112 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~----~~~~~~~~ey~~  112 (160)
                      .+.+|.+.+...+..++.+.....   ..    ...+ +..+    .....|||++++++.+..    ....+++|||+.
T Consensus        31 ~g~V~~~~~~~~~~~vaiK~~~~~---~~----~~~e-~~~~----~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~   98 (299)
T 3m2w_A           31 NGKVLQIFNKRTQEKFALKMLQDC---PK----ARRE-VELH----WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD   98 (299)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECS---HH----HHHH-HHHH----HHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred             CeEEEEEEEcCCCcEEEEEEeccc---HH----HHHH-HHHH----HHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence            366788877666666665544321   11    1111 1111    123589999999998877    778999999999


Q ss_pred             CCCcccceec
Q psy11428        113 GGDLARIVHR  122 (160)
Q Consensus       113 ~~~l~~iih~  122 (160)
                      +++|..++..
T Consensus        99 ~~~L~~~l~~  108 (299)
T 3m2w_A           99 GGELFSRIQD  108 (299)
T ss_dssp             SCBHHHHHHH
T ss_pred             CCcHHHHHHh
Confidence            9999776654

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=95.76  E-value=0.018  Score=41.80  Aligned_cols=38  Identities=29%  Similarity=0.535  Sum_probs=33.8

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||++++++.+......+++|||+.+++|..++..
T Consensus        65 ~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~  102 (288)
T 3kfa_A           65 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRE  102 (288)
T ss_dssp             HCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHH
T ss_pred             hCCCCCEeeEEEEEccCCCEEEEEEcCCCCcHHHHHHh
Confidence            47899999999999999999999999999998776643

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=95.74  E-value=0.018  Score=44.05  Aligned_cols=39  Identities=21%  Similarity=0.450  Sum_probs=35.0

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .++.|||++++++.+......+++|||+.+++|..+++.
T Consensus       101 ~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~  139 (373)
T 2qol_A          101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRK  139 (373)
T ss_dssp             TTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHT
T ss_pred             HhCCCCCCCeEEEEEeeCCceEEEEeCCCCCcHHHHHHh
Confidence            357899999999999999999999999999999877754

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=95.73  E-value=0.011  Score=44.61  Aligned_cols=37  Identities=32%  Similarity=0.574  Sum_probs=31.5

Q ss_pred             CCCceeEEeeeeecCC-eeEEEEEecCCCCcccceecC
Q psy11428         87 HHENVVELLHCKESDQ-HVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~-~~~~~~ey~~~~~l~~iih~d  123 (160)
                      +|||+++++..+...+ .++++||||.+++|..+++..
T Consensus        84 ~hpniv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~  121 (359)
T 3vhe_A           84 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK  121 (359)
T ss_dssp             CCTTBCCEEEEECSTTSCCEEEEECCTTEEHHHHHHTT
T ss_pred             CCcceeeeeeeeecCCCceEEEEEecCCCcHHHHHHhc
Confidence            7999999999887654 499999999999998877654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=95.72  E-value=0.0073  Score=50.13  Aligned_cols=37  Identities=30%  Similarity=0.556  Sum_probs=32.8

Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+||+++.++..+++.+.++++|||+.|++|...+.+
T Consensus       399 ~~~~~i~~l~~~~~~~~~~~lV~E~~~gg~L~~~l~~  435 (674)
T 3pfq_A          399 GKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQ  435 (674)
T ss_dssp             TCCTTBCCEEEECBCSSEEEEEEECCCSCBHHHHHHH
T ss_pred             cCCCeEEEEEEEEEeCCEEEEEEeCcCCCcHHHHHHh
Confidence            3799999999999999999999999999999765543

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=95.70  E-value=0.0095  Score=45.60  Aligned_cols=38  Identities=34%  Similarity=0.661  Sum_probs=33.7

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .++.|||+++++..+...+..+++|||+.+++|..++.
T Consensus       167 ~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  204 (377)
T 3cbl_A          167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR  204 (377)
T ss_dssp             TTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHH
T ss_pred             HhCCCCCEEEEEEEEecCCCcEEEEEcCCCCCHHHHHH
Confidence            35789999999999999999999999999999876654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=95.68  E-value=0.027  Score=41.24  Aligned_cols=76  Identities=20%  Similarity=0.379  Sum_probs=46.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|.+.+...+..++.+........  ....+..    ++..+  ..+.|||++++++.+...+..+++|||+.++++.
T Consensus        33 g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~----e~~~l--~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~  104 (302)
T 2j7t_A           33 GKVYKAKNKETGALAAAKVIETKSEE--ELEDYIV----EIEIL--ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVD  104 (302)
T ss_dssp             CCEEEEEETTTCCEEEEEEEC----C--CHHHHHH----HHHHH--HHCCCTTBCCEEEEEECC-CEEEEEECCTTEEHH
T ss_pred             eEEEEEEEcCCCcEEEEEEecCCCHH--HHHHHHH----HHHHH--hcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcHH
Confidence            56788776554544554443222111  1111111    12211  3478999999999999999999999999998886


Q ss_pred             ccee
Q psy11428        118 RIVH  121 (160)
Q Consensus       118 ~iih  121 (160)
                      .++.
T Consensus       105 ~~~~  108 (302)
T 2j7t_A          105 AIML  108 (302)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=95.67  E-value=0.015  Score=44.00  Aligned_cols=37  Identities=30%  Similarity=0.515  Sum_probs=33.3

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ++.|||++++++.+......+++|||+.+++|...+.
T Consensus       104 ~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  140 (349)
T 2w4o_A          104 RLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIV  140 (349)
T ss_dssp             HCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHT
T ss_pred             hCCCCCCcceeeeEecCCeEEEEEEeCCCCCHHHHHH
Confidence            5789999999999999999999999999999866554

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=95.65  E-value=0.012  Score=43.74  Aligned_cols=36  Identities=25%  Similarity=0.562  Sum_probs=30.3

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.|||++++++.+...+ .+++|||+.++++...+.
T Consensus        71 ~l~h~~i~~~~~~~~~~~-~~lv~e~~~~~~L~~~~~  106 (322)
T 2ycf_A           71 KLNHPCIIKIKNFFDAED-YYIVLELMEGGELFDKVV  106 (322)
T ss_dssp             HCCCTTBCCEEEEEESSS-EEEEEECCTTEETHHHHS
T ss_pred             hCCCCCCceEeeEEcCCc-eEEEEecCCCCcHHHHHh
Confidence            578999999999987665 899999999998866554

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=95.65  E-value=0.039  Score=41.03  Aligned_cols=38  Identities=24%  Similarity=0.523  Sum_probs=34.3

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||++++++.+......+++|||+.+++|..++..
T Consensus        89 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  126 (327)
T 2yfx_A           89 KFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRE  126 (327)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHH
T ss_pred             hCCCCCCCeEEEEEcCCCCcEEEEecCCCCcHHHHHHh
Confidence            47899999999999999999999999999999777654

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=95.60  E-value=0.042  Score=39.64  Aligned_cols=45  Identities=11%  Similarity=0.060  Sum_probs=32.5

Q ss_pred             HHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeE
Q psy11428         10 VLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLAD   54 (160)
Q Consensus        10 ~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~   54 (160)
                      .....|.+.|+.+. +-.+.++++...+.+..|++|++++|.++..
T Consensus        64 ~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~~  109 (272)
T 4gkh_A           64 NDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAFQ  109 (272)
T ss_dssp             HHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHHH
T ss_pred             hHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccccc
Confidence            34566777777764 3346667777788888999999999876543

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=95.59  E-value=0.013  Score=43.16  Aligned_cols=39  Identities=31%  Similarity=0.512  Sum_probs=34.6

Q ss_pred             hc-CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         85 EL-HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        85 ~l-~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      ++ .|||++++++.+...+..+++|||+.+++|..++...
T Consensus        82 ~l~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  121 (313)
T 1t46_A           82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRK  121 (313)
T ss_dssp             HHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHT
T ss_pred             hcccCCCeeeEEEEEecCCCcEEEEecCCCCCHHHHHHhc
Confidence            35 7999999999999999999999999999998776543

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=95.58  E-value=0.041  Score=40.31  Aligned_cols=78  Identities=13%  Similarity=0.193  Sum_probs=50.6

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|.+.+...+..++.++........ ....+.. .+..+     ..+.|||+++++..+......+++|||+.++++
T Consensus        35 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~-e~~~l-----~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L  107 (303)
T 3a7i_A           35 FGEVFKGIDNRTQKVVAIKIIDLEEAED-EIEDIQQ-EITVL-----SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSA  107 (303)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEETTTCST-THHHHHH-HHHHH-----HHCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred             CeEEEEEEECCCCcEEEEEEecccccHH-HHHHHHH-HHHHH-----HhCCCCCEeEEEEEEecCCeEEEEEEeCCCCcH
Confidence            3577888765556556655543322211 1111111 11222     347899999999999999999999999999888


Q ss_pred             cccee
Q psy11428        117 ARIVH  121 (160)
Q Consensus       117 ~~iih  121 (160)
                      ..++.
T Consensus       108 ~~~~~  112 (303)
T 3a7i_A          108 LDLLE  112 (303)
T ss_dssp             HHHHT
T ss_pred             HHHHh
Confidence            66553

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=95.56  E-value=0.019  Score=44.20  Aligned_cols=78  Identities=24%  Similarity=0.407  Sum_probs=48.2

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC--eeEEEEEecCCCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ--HVYLVMEFCNGGD  115 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~--~~~~~~ey~~~~~  115 (160)
                      +.+|++.+...+..++.+.......... ...+. ..+..+     ..+.|||++++++.+....  ..+++|||+.+++
T Consensus        23 g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~~-~E~~~l-----~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~g~   95 (396)
T 4eut_A           23 ANVFRGRHKKTGDLFAIKVFNNISFLRP-VDVQM-REFEVL-----KKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGS   95 (396)
T ss_dssp             EEEEEEEETTTCCEEEEEEECGGGGGSC-HHHHH-HHHHHH-----HHCCCTTBCCEEEEEECTTTCCEEEEECCCTTEE
T ss_pred             eEEEEEEECCCCcEEEEEEeccccccch-HHHHH-HHHHHH-----HhcCCCCCCeEEEeeccCCCCeeEEEEecCCCCC
Confidence            5677777655555565554432211111 11111 112222     3478999999999887655  7899999999999


Q ss_pred             cccceec
Q psy11428        116 LARIVHR  122 (160)
Q Consensus       116 l~~iih~  122 (160)
                      |..++..
T Consensus        96 L~~~l~~  102 (396)
T 4eut_A           96 LYTVLEE  102 (396)
T ss_dssp             HHHHTTS
T ss_pred             HHHHHHh
Confidence            8766543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=95.49  E-value=0.028  Score=42.00  Aligned_cols=87  Identities=18%  Similarity=0.284  Sum_probs=50.8

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.++.- ..+.+|++.+...+..++.+..............    ...++..  ..++.|||+++++..+...+.+++
T Consensus        38 ~~~~lg~G-~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~----~~~E~~~--l~~l~h~~iv~~~~~~~~~~~~~l  110 (329)
T 3gbz_A           38 RITKLGEG-TYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGT----AIREVSL--LKELQHRNIIELKSVIHHNHRLHL  110 (329)
T ss_dssp             EEEEEEEC-SSSEEEEEEETTTTEEEEEEECCCCC------------CHHHHHH--GGGCCCTTBCCEEEEEEETTEEEE
T ss_pred             EEEEEEec-CCeEEEEEEECCCCceEEEEEEcccccccccchh----HHHHHHH--HHHcCCCCcceEEEEEecCCEEEE
Confidence            44444432 3367888877665555555543322211111111    1122222  235789999999999999999999


Q ss_pred             EEEecCCCCccccee
Q psy11428        107 VMEFCNGGDLARIVH  121 (160)
Q Consensus       107 ~~ey~~~~~l~~iih  121 (160)
                      +|||+.+ ++..++.
T Consensus       111 v~e~~~~-~L~~~~~  124 (329)
T 3gbz_A          111 IFEYAEN-DLKKYMD  124 (329)
T ss_dssp             EEECCSE-EHHHHHH
T ss_pred             EEecCCC-CHHHHHh
Confidence            9999986 6655443

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=95.43  E-value=0.047  Score=40.17  Aligned_cols=37  Identities=22%  Similarity=0.536  Sum_probs=33.1

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.|||+++++..+......+++|||+.+++|..++.
T Consensus        80 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~  116 (314)
T 3com_A           80 QCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIR  116 (314)
T ss_dssp             TCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHH
T ss_pred             hCCCCCCccEEEEEEeCCEEEEEeecCCCCCHHHHHH
Confidence            5789999999999999999999999999988876653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=95.39  E-value=0.032  Score=39.98  Aligned_cols=38  Identities=26%  Similarity=0.381  Sum_probs=33.9

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||+++++..+...+..+++|||+.+++|..++..
T Consensus        59 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~   96 (267)
T 3t9t_A           59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRT   96 (267)
T ss_dssp             TCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHH
T ss_pred             hCCCCCEeeEEEEEccCCCeEEEEeCCCCCcHHHHHhh
Confidence            47899999999999999999999999999998776643

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=95.35  E-value=0.044  Score=40.20  Aligned_cols=37  Identities=30%  Similarity=0.453  Sum_probs=33.2

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.|||+++++..+...+..+++|||+.++++..++.
T Consensus        86 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  122 (307)
T 2nru_A           86 KCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLS  122 (307)
T ss_dssp             HCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHH
T ss_pred             hcCCCCeEEEEEEEecCCceEEEEEecCCCcHHHHHH
Confidence            4789999999999999999999999999999876654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=95.32  E-value=0.063  Score=40.14  Aligned_cols=38  Identities=16%  Similarity=0.424  Sum_probs=34.0

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||+++++..+...+..+++|||+.+++|..++..
T Consensus       102 ~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  139 (333)
T 1mqb_A          102 QFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLRE  139 (333)
T ss_dssp             TCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHH
T ss_pred             hCCCCCCCcEEEEEecCCCcEEEEeCCCCCcHHHHHHh
Confidence            57899999999999999999999999999998776643

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=95.30  E-value=0.027  Score=41.72  Aligned_cols=38  Identities=24%  Similarity=0.430  Sum_probs=30.0

Q ss_pred             hhcCCCceeEEeeeeecCCee------EEEEEecCCCCccccee
Q psy11428         84 KELHHENVVELLHCKESDQHV------YLVMEFCNGGDLARIVH  121 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~------~~~~ey~~~~~l~~iih  121 (160)
                      .++.|||++++++.+......      +++|||+.+++|..++.
T Consensus        80 ~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~  123 (323)
T 3qup_A           80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL  123 (323)
T ss_dssp             TTCCCTTBCCCCEEEECC-------CEEEEEECCTTCBHHHHHH
T ss_pred             HHCCCCceehhhceeeccccccCCCccEEEEEeccCCcHHHHHH
Confidence            357899999999998877765      99999999999876653

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=95.29  E-value=0.089  Score=38.20  Aligned_cols=36  Identities=28%  Similarity=0.504  Sum_probs=30.5

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ++.|||++++++.+ ..+..+++|||+.+++|..++.
T Consensus        66 ~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~  101 (287)
T 1u59_A           66 QLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLV  101 (287)
T ss_dssp             HCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHT
T ss_pred             hCCCCCEeEEEEEe-cCCCcEEEEEeCCCCCHHHHHH
Confidence            47899999999998 4566999999999998876654

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=95.28  E-value=0.058  Score=38.72  Aligned_cols=37  Identities=35%  Similarity=0.601  Sum_probs=31.0

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.|||+++++..+......+++|||+.++++..++.
T Consensus        62 ~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~   98 (271)
T 3dtc_A           62 MLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS   98 (271)
T ss_dssp             HCCCTTBCCEEEEECCC--CEEEEECCTTEEHHHHHT
T ss_pred             hcCCCCEeeEEEEEecCCceEEEEEcCCCCCHHHHhh
Confidence            4789999999999999999999999999998866553

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=95.25  E-value=0.049  Score=44.62  Aligned_cols=37  Identities=27%  Similarity=0.507  Sum_probs=31.8

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||+++++..+.. +.++++|||+.+++|..++..
T Consensus       392 ~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~  428 (613)
T 2ozo_A          392 QLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVG  428 (613)
T ss_dssp             TCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHTT
T ss_pred             hCCCCCEeeEEEEecc-CCeEEEEEeCCCCcHHHHHhh
Confidence            5789999999999876 569999999999999776643

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=95.24  E-value=0.03  Score=41.27  Aligned_cols=38  Identities=21%  Similarity=0.424  Sum_probs=31.4

Q ss_pred             hcCCCceeEEeeeee----cCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKE----SDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~----~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||++++++.+.    .....+++|||+.+++|..++.+
T Consensus        82 ~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  123 (317)
T 2buj_A           82 LFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIER  123 (317)
T ss_dssp             TCCCTTBCCCCEEEEEEETTEEEEEEEEECCTTCBHHHHHHH
T ss_pred             hcCCCCeeeEEEEEEeccCCCceeEEEEEeCCCCcHHHHHHH
Confidence            578999999998886    45578999999999998766543

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=95.22  E-value=0.099  Score=39.89  Aligned_cols=37  Identities=24%  Similarity=0.584  Sum_probs=33.8

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      .|||+++++..+...+..+++|||+.+++|..++...
T Consensus       133 ~hpnIv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~  169 (382)
T 3tt0_A          133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR  169 (382)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHT
T ss_pred             CCchhhhheeeeccCCceEEEEEecCCCcHHHHHHHh
Confidence            7999999999999999999999999999998877654

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=95.21  E-value=0.062  Score=39.72  Aligned_cols=85  Identities=26%  Similarity=0.388  Sum_probs=51.5

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeeec-----
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKES-----  100 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~-----  100 (160)
                      +.+.++.. ..+.+|.+.+...+..++.+............   .. .+..++     ++ .|||+++++..+..     
T Consensus        28 ~~~~lg~G-~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~---~~-e~~~l~-----~l~~h~~i~~~~~~~~~~~~~~   97 (326)
T 2x7f_A           28 LVELVGNG-TYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEI---KQ-EINMLK-----KYSHHRNIATYYGAFIKKNPPG   97 (326)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTTCCEEEEEEEECCSSTTHHH---HH-HHHHHH-----HHCCSTTBCCEEEEEEECC--C
T ss_pred             EEEEeccC-CCEEEEEEEECCCCCeEEEEEEecCcccHHHH---HH-HHHHHH-----hccCCCCeeeeeeEEeeccCcc
Confidence            34444432 33567887765556556655543322222111   11 112222     24 79999999999876     


Q ss_pred             -CCeeEEEEEecCCCCccccee
Q psy11428        101 -DQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus       101 -~~~~~~~~ey~~~~~l~~iih  121 (160)
                       ....+++|||+.+++|..++.
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~  119 (326)
T 2x7f_A           98 MDDQLWLVMEFCGAGSVTDLIK  119 (326)
T ss_dssp             CCCEEEEEEECCTTEEHHHHHH
T ss_pred             ccceEEEEEEcCCCCcHHHHHH
Confidence             568999999999998876654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=95.17  E-value=0.078  Score=38.67  Aligned_cols=38  Identities=26%  Similarity=0.492  Sum_probs=32.2

Q ss_pred             hcCCCceeEEeee-eecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHC-KESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~-~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++.|||++++++. ....+..+++|||+.+++|..++..
T Consensus        82 ~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~  120 (298)
T 3f66_A           82 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN  120 (298)
T ss_dssp             TCCCTTBCCCCEEECCSSSCCEEEEECCTTCBHHHHHHC
T ss_pred             hCCCCCEeeeeeEEEcCCCceEEEEeCCCCCCHHHHHHh
Confidence            5789999999997 5667788999999999999777654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=95.14  E-value=0.021  Score=42.85  Aligned_cols=75  Identities=16%  Similarity=0.220  Sum_probs=47.8

Q ss_pred             cCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec----CCeeEEEEEec
Q psy11428         36 SDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES----DQHVYLVMEFC  111 (160)
Q Consensus        36 ~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~----~~~~~~~~ey~  111 (160)
                      ..+.+|++.+...+..++.++....   ....    .++...     ...+.|||+++++..++.    ....+++|||+
T Consensus        41 ~~g~V~~~~~~~~~~~vavK~~~~~---~~~~----~e~~~~-----~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~  108 (336)
T 3fhr_A           41 VNGKVLECFHRRTGQKCALKLLYDS---PKAR----QEVDHH-----WQASGGPHIVCILDVYENMHHGKRCLLIIMECM  108 (336)
T ss_dssp             TTEEEEEEEETTTCCEEEEEEEESS---HHHH----HHHHHH-----HHHTTSTTBCCEEEEEEEEETTEEEEEEEEECC
T ss_pred             CCeEEEEEEECCCCCEEEEEEecCc---HHHH----HHHHHH-----HHhcCCCChHHHHHHHhhccCCCceEEEEEecc
Confidence            3466777777666666665544321   1111    111111     123689999999998876    55589999999


Q ss_pred             CCCCcccceec
Q psy11428        112 NGGDLARIVHR  122 (160)
Q Consensus       112 ~~~~l~~iih~  122 (160)
                      .|++|..++..
T Consensus       109 ~gg~L~~~l~~  119 (336)
T 3fhr_A          109 EGGELFSRIQE  119 (336)
T ss_dssp             TTEEHHHHHHT
T ss_pred             CCCCHHHHHHh
Confidence            99998776653

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=95.12  E-value=0.0092  Score=45.58  Aligned_cols=79  Identities=5%  Similarity=0.061  Sum_probs=45.1

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCC-CHHHHHHHHHHHHHHHHHhh-hhhcCCCceeEEe-------eeeecCC------
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQALKAFQ-VKELHHENVVELL-------HCKESDQ------  102 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~l~h~niv~~~-------~~~~~~~------  102 (160)
                      +.+|.+.+...+..++.+....... .......+.    .++..+. ..++.|||+++++       +.++..+      
T Consensus        87 g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~----~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~  162 (377)
T 3byv_A           87 YAYLEATDQETGESFEVHVPYFTERPPSNAIKQMK----EEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIR  162 (377)
T ss_dssp             EEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHH----HHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEE
T ss_pred             EEEEEEEECCCCcEEEEEEEeeccccchHHHHHHH----HHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCccccc
Confidence            5677777656566666665443222 222222222    2222222 2457899999887       5555543      


Q ss_pred             -----------eeEEEEEecCCCCccccee
Q psy11428        103 -----------HVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus       103 -----------~~~~~~ey~~~~~l~~iih  121 (160)
                                 ..+++|||+ +|+|..++.
T Consensus       163 ~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~  191 (377)
T 3byv_A          163 VRLDERDMWVLSRFFLYPRM-QSNLQTFGE  191 (377)
T ss_dssp             C------CEEESEEEEEECC-SEEHHHHHH
T ss_pred             cccCCCceEEEEEEEEEecc-CCCHHHHHH
Confidence                       278999999 568876654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=95.08  E-value=0.061  Score=39.08  Aligned_cols=76  Identities=18%  Similarity=0.326  Sum_probs=47.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec-------------CCee
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES-------------DQHV  104 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~-------------~~~~  104 (160)
                      +.+|.+.+...+..++.+.....   .....    .+..++..+  ..+.|||+++++..+..             ....
T Consensus        20 g~V~~~~~~~~~~~vaiK~~~~~---~~~~~----~~~~E~~~l--~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~   90 (303)
T 1zy4_A           20 GQVVKARNALDSRYYAIKKIRHT---EEKLS----TILSEVMLL--ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTL   90 (303)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEEE---HHHHH----HHHHHHHHH--TTCCCTTBCCEEEEEEECCCCCC------CEEEE
T ss_pred             EEEEEEEEcCCCeEEEEEEEecc---HHHHH----HHHHHHHHH--HhcCchHHHHHHHHHHhhcchhhhhcccccCCce
Confidence            56777776555655555543321   11221    122222222  35789999999887644             4678


Q ss_pred             EEEEEecCCCCcccceec
Q psy11428        105 YLVMEFCNGGDLARIVHR  122 (160)
Q Consensus       105 ~~~~ey~~~~~l~~iih~  122 (160)
                      +++|||+.+++|..++..
T Consensus        91 ~lv~e~~~~~~L~~~l~~  108 (303)
T 1zy4_A           91 FIQMEYCENGTLYDLIHS  108 (303)
T ss_dssp             EEEEECCCSCBHHHHHHH
T ss_pred             EEEEecCCCCCHHHhhhc
Confidence            999999999999777653

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=95.06  E-value=0.1  Score=38.59  Aligned_cols=35  Identities=40%  Similarity=0.710  Sum_probs=29.7

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccce
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV  120 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~ii  120 (160)
                      ++.|||++++++.+......+++|||+.+ ++...+
T Consensus        75 ~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~  109 (311)
T 3niz_A           75 ELHHPNIVSLIDVIHSERCLTLVFEFMEK-DLKKVL  109 (311)
T ss_dssp             HCCCTTBCCEEEEECCSSCEEEEEECCSE-EHHHHH
T ss_pred             HcCCCCEeeeeeEEccCCEEEEEEcCCCC-CHHHHH
Confidence            57899999999999999999999999986 444433

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=95.02  E-value=0.051  Score=41.11  Aligned_cols=37  Identities=14%  Similarity=0.118  Sum_probs=33.4

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ...|+|++.++..+...+..+++|||+.+++|..+++
T Consensus       123 ~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  159 (365)
T 3e7e_A          123 PSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAIN  159 (365)
T ss_dssp             GGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHH
T ss_pred             hhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHH
Confidence            4569999999999999999999999999999987765

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=94.98  E-value=0.083  Score=38.26  Aligned_cols=37  Identities=24%  Similarity=0.626  Sum_probs=30.8

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++.|||++++++.+. .+..+++|||+.+++|..++..
T Consensus        72 ~l~h~~iv~~~~~~~-~~~~~lv~e~~~~~~L~~~l~~  108 (281)
T 1mp8_A           72 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQV  108 (281)
T ss_dssp             TCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHH
T ss_pred             hCCCCccceEEEEEc-cCccEEEEecCCCCCHHHHHHh
Confidence            578999999999874 5678999999999998776643

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=94.96  E-value=0.087  Score=39.26  Aligned_cols=37  Identities=24%  Similarity=0.579  Sum_probs=33.8

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      .|||+++++..+...+..+++|||+.+++|..++...
T Consensus        99 ~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  135 (334)
T 2pvf_A           99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRAR  135 (334)
T ss_dssp             CCTTBCCEEEEECSSSCCEEEEECCTTCBHHHHHHTT
T ss_pred             cCCCEeeEEEEEccCCceEEEEECCCCCcHHHHHHHh
Confidence            7999999999999999999999999999998877653

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=94.95  E-value=0.069  Score=38.73  Aligned_cols=81  Identities=20%  Similarity=0.136  Sum_probs=46.7

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCC-HHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCC
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLS-EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD  115 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~  115 (160)
                      .+.+|.+.+...+..++.+........ .............+...+  .++.|||++++++.+....  +++|||+.+++
T Consensus        32 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l--~~l~h~~i~~~~~~~~~~~--~lv~e~~~~~~  107 (287)
T 4f0f_A           32 FGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIM--SNLNHPNIVKLYGLMHNPP--RMVMEFVPCGD  107 (287)
T ss_dssp             SSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHH--TTCCCTTBCCEEEEETTTT--EEEEECCTTCB
T ss_pred             ceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHH--HhCCCCCchhhheeecCCC--eEEEEecCCCC
Confidence            356788776555555555543322211 111110001111222222  3578999999999987665  68999999998


Q ss_pred             ccccee
Q psy11428        116 LARIVH  121 (160)
Q Consensus       116 l~~iih  121 (160)
                      +...+.
T Consensus       108 L~~~l~  113 (287)
T 4f0f_A          108 LYHRLL  113 (287)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            865543

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=94.89  E-value=0.13  Score=39.08  Aligned_cols=76  Identities=18%  Similarity=0.311  Sum_probs=45.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC------eeEEEEEec
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ------HVYLVMEFC  111 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~------~~~~~~ey~  111 (160)
                      +.+|.+.+...+..++.+..............+..+ +..+     ..+.|||++++++.+....      .++++|||+
T Consensus        39 g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E-~~~l-----~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~e~~  112 (371)
T 2xrw_A           39 GIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRE-LVLM-----KCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM  112 (371)
T ss_dssp             EEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHH-HHHH-----HHCCCTTBCCEEEEECSCCSTTTCCEEEEEEECC
T ss_pred             EEEEEEEECCCCceEEEEEeccccCChHHHHHHHHH-HHHH-----HhcCCCCccceEEeeccccccccccceEEEEEcC
Confidence            567777765555555555444332222222222221 1222     3478999999999887665      789999999


Q ss_pred             CCCCcccce
Q psy11428        112 NGGDLARIV  120 (160)
Q Consensus       112 ~~~~l~~ii  120 (160)
                      .+ ++...+
T Consensus       113 ~~-~l~~~~  120 (371)
T 2xrw_A          113 DA-NLCQVI  120 (371)
T ss_dssp             SE-EHHHHH
T ss_pred             CC-CHHHHH
Confidence            86 443433

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=94.83  E-value=0.071  Score=38.63  Aligned_cols=72  Identities=13%  Similarity=0.107  Sum_probs=44.0

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      +.+|++.+...+..++.+....... .........+....     ...+.|||+++++..+...+..+++|||+.+ ++
T Consensus        21 g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~-----~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l   92 (290)
T 3fme_A           21 GVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDIS-----MRTVDCPFTVTFYGALFREGDVWICMELMDT-SL   92 (290)
T ss_dssp             EEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHH-----HTTCCCTTBCCEEEEEECSSSEEEEEECCSE-EH
T ss_pred             eEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHH-----HHhCCCCeEEEEeeeeeccCCEEEEEehhcc-ch
Confidence            5677777655555555554332211 22222222221111     2357899999999999999999999999985 44

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=94.81  E-value=0.063  Score=38.72  Aligned_cols=82  Identities=24%  Similarity=0.411  Sum_probs=49.9

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec------
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES------  100 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~------  100 (160)
                      +++.++.- ..+.+|.+.+...+..++.+......  +..     ...+..+     ..+.|||+++++..+..      
T Consensus        15 ~~~~lg~G-~~g~V~~~~~~~~~~~vavK~~~~~~--~~~-----~~e~~~l-----~~l~h~~i~~~~~~~~~~~~~~~   81 (284)
T 2a19_B           15 EIELIGSG-GFGQVFKAKHRIDGKTYVIKRVKYNN--EKA-----EREVKAL-----AKLDHVNIVHYNGCWDGFDYDPE   81 (284)
T ss_dssp             EEEEEECS-SSCCEEEEEETTTCCEEEEEEEECCS--GGG-----HHHHHHH-----HHCCCTTBCCEEEEEEEEEEC--
T ss_pred             eeeeeccC-CceEEEEEEEcCCCeEEEEEEecccc--HHH-----HHHHHHH-----HhCCCCCEEEEeeeEeccccCcc
Confidence            34444422 23578888775556555555433221  111     1111222     24789999999988754      


Q ss_pred             ----------CCeeEEEEEecCCCCccccee
Q psy11428        101 ----------DQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus       101 ----------~~~~~~~~ey~~~~~l~~iih  121 (160)
                                ...++++|||+.+++|..++.
T Consensus        82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  112 (284)
T 2a19_B           82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIE  112 (284)
T ss_dssp             -------CCEEEEEEEEECCCCSCBHHHHHH
T ss_pred             cccccccccCcceEEEEEeccCCCCHHHHHh
Confidence                      455899999999999977664

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=94.81  E-value=0.061  Score=40.39  Aligned_cols=38  Identities=24%  Similarity=0.248  Sum_probs=32.3

Q ss_pred             hhcCCCceeEEeeeeec----CCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKES----DQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~----~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ..+.|||+++++..+..    ....+++|||+ +++|..++..
T Consensus       103 ~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~  144 (345)
T 2v62_A          103 KQLDYLGIPLFYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQ  144 (345)
T ss_dssp             HTCSCCCCCCEEEEEEEESSSCEEEEEEEECE-EEEHHHHCBG
T ss_pred             ccccccCcceeecccccccCCCcEEEEEEecc-CCCHHHHHHh
Confidence            45799999999999877    78899999999 8888766543

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=94.81  E-value=0.051  Score=40.34  Aligned_cols=75  Identities=27%  Similarity=0.354  Sum_probs=46.0

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+........ .....+.    .++..  ..++.|||++++++.+...+..+++|||+.+ ++.
T Consensus        19 g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~----~E~~~--l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~-~L~   90 (317)
T 2pmi_A           19 ATVYKGLNKTTGVYVALKEVKLDSEE-GTPSTAI----REISL--MKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLK   90 (317)
T ss_dssp             CEEEEEECSSSCCEEEEEEEECCSTT-CSCHHHH----HHHHH--HTTCCBTTBCCEEEEECCTTEEEEEEECCCC-BHH
T ss_pred             EEEEEEEECCCCcEEEEEEeeccccc-ccHHHHH----HHHHH--HHhcCCCCcceEEEEEEECCeEEEEEEecCC-CHH
Confidence            56777766555555555544322211 1111111    12222  1357899999999999999999999999985 665


Q ss_pred             cce
Q psy11428        118 RIV  120 (160)
Q Consensus       118 ~ii  120 (160)
                      .++
T Consensus        91 ~~l   93 (317)
T 2pmi_A           91 KYM   93 (317)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=94.79  E-value=0.069  Score=38.89  Aligned_cols=85  Identities=21%  Similarity=0.273  Sum_probs=49.0

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.++.. ..+.+|++.+ ..+..++.+..............+    ..++..+  ..+.|||++++++.+...+..++
T Consensus         6 ~~~~lg~G-~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~----~~E~~~l--~~l~h~~iv~~~~~~~~~~~~~l   77 (288)
T 1ob3_A            6 GLEKIGEG-TYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTT----IREISIL--KELKHSNIVKLYDVIHTKKRLVL   77 (288)
T ss_dssp             EEEEEEEE-TTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHH----HHHHHGG--GGCCCTTBCCEEEEEECSSCEEE
T ss_pred             hhhhcccC-CCEEEEEEEc-CCCCEEEEEEEeccccccccchhH----HHHHHHH--HhcCCCCEeeeeeEEccCCeEEE
Confidence            34444432 3357788876 444455544332221111111111    1222222  35789999999999999999999


Q ss_pred             EEEecCCCCcccce
Q psy11428        107 VMEFCNGGDLARIV  120 (160)
Q Consensus       107 ~~ey~~~~~l~~ii  120 (160)
                      +|||+.+ ++...+
T Consensus        78 v~e~~~~-~l~~~~   90 (288)
T 1ob3_A           78 VFEHLDQ-DLKKLL   90 (288)
T ss_dssp             EEECCSE-EHHHHH
T ss_pred             EEEecCC-CHHHHH
Confidence            9999986 554443

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=94.77  E-value=0.087  Score=38.15  Aligned_cols=36  Identities=22%  Similarity=0.319  Sum_probs=30.4

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ++.|||++++++.+.... .+++|||+.++++...+.
T Consensus        77 ~l~h~~i~~~~~~~~~~~-~~~v~e~~~~~~L~~~l~  112 (291)
T 1u46_A           77 SLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLR  112 (291)
T ss_dssp             HCCCTTBCCEEEEECSSS-CEEEEECCTTCBHHHHHH
T ss_pred             hCCCCCcccEEEEEccCC-ceeeEecccCCCHHHHHH
Confidence            478999999999988765 899999999998866543

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=94.70  E-value=0.086  Score=41.59  Aligned_cols=71  Identities=23%  Similarity=0.288  Sum_probs=42.2

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecC------CeeEEEEEec
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESD------QHVYLVMEFC  111 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~------~~~~~~~ey~  111 (160)
                      +.+|++.+...+..++.+..............+..    ++..+  ..+.||||+++++.+...      ..++++|||+
T Consensus        76 g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~----E~~~l--~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~E~~  149 (464)
T 3ttj_A           76 GIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR----ELVLM--KCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM  149 (464)
T ss_dssp             CEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHH----HHHHH--HHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECC
T ss_pred             eEEEEEEECCCCCEEEEEEECccccChHHHHHHHH----HHHHH--HhCCCCCCCcEEEEEccCCccccCCeEEEEEeCC
Confidence            55677766555555555544332222222222222    22221  347899999999998554      4579999999


Q ss_pred             CCC
Q psy11428        112 NGG  114 (160)
Q Consensus       112 ~~~  114 (160)
                      .++
T Consensus       150 ~~~  152 (464)
T 3ttj_A          150 DAN  152 (464)
T ss_dssp             SEE
T ss_pred             CCC
Confidence            875

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=94.65  E-value=0.12  Score=40.33  Aligned_cols=76  Identities=18%  Similarity=0.266  Sum_probs=44.2

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeee-----ecCCeeEEEEEecC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCK-----ESDQHVYLVMEFCN  112 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~-----~~~~~~~~~~ey~~  112 (160)
                      +.+|++.+...+..++.+..............+..    ++..+  ..+.||||+++++.+     +....++++|||+.
T Consensus        67 g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~----E~~~l--~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~  140 (458)
T 3rp9_A           67 GHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR----EIAIL--NRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIAD  140 (458)
T ss_dssp             -CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHH----HHHHH--HHCCCTTBCCEEEECCCSCTTTCCCEEEEECCCS
T ss_pred             eEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHH----HHHHH--HhCCCCCCCceEEEEecCCcccCceEEEEEeccc
Confidence            56788887766666666544332222222222222    22222  347899999999988     44467999999975


Q ss_pred             CCCcccce
Q psy11428        113 GGDLARIV  120 (160)
Q Consensus       113 ~~~l~~ii  120 (160)
                       +++..++
T Consensus       141 -~~L~~~~  147 (458)
T 3rp9_A          141 -SDFKKLF  147 (458)
T ss_dssp             -EEHHHHH
T ss_pred             -cchhhhc
Confidence             4554443

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=94.63  E-value=0.17  Score=38.54  Aligned_cols=87  Identities=25%  Similarity=0.361  Sum_probs=47.4

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC-CCceeEEeeeeecCC--e
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH-HENVVELLHCKESDQ--H  103 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-h~niv~~~~~~~~~~--~  103 (160)
                      +++.++.. ..+.+|.+.+...+..++.+.................++ ..+     ..+. |||++++++.+...+  .
T Consensus        13 ~~~~lG~G-~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~-~~l-----~~l~~h~niv~l~~~~~~~~~~~   85 (388)
T 3oz6_A           13 LVKKLGKG-AYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREI-MIL-----TELSGHENIVNLLNVLRADNDRD   85 (388)
T ss_dssp             EEEC--------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHH-HHH-----HHTTTCTTBCCEEEEEECTTSSC
T ss_pred             EEEEeeeC-CCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHH-HHH-----HhccCCCCCCeeeeEEecCCCCE
Confidence            44444432 236788888877676666654432222233332222221 122     2354 999999999987544  7


Q ss_pred             eEEEEEecCCCCccccee
Q psy11428        104 VYLVMEFCNGGDLARIVH  121 (160)
Q Consensus       104 ~~~~~ey~~~~~l~~iih  121 (160)
                      ++++|||+.+ ++..++.
T Consensus        86 ~~lv~e~~~~-~L~~~~~  102 (388)
T 3oz6_A           86 VYLVFDYMET-DLHAVIR  102 (388)
T ss_dssp             EEEEEECCSE-EHHHHHH
T ss_pred             EEEEecccCc-CHHHHHH
Confidence            8999999985 5544443

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=94.63  E-value=0.04  Score=40.51  Aligned_cols=36  Identities=33%  Similarity=0.586  Sum_probs=30.5

Q ss_pred             CCCceeEEeeeeecC-CeeEEEEEecCCCCcccceec
Q psy11428         87 HHENVVELLHCKESD-QHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        87 ~h~niv~~~~~~~~~-~~~~~~~ey~~~~~l~~iih~  122 (160)
                      +|||++++++.+... ..++++|||+.+++|..++..
T Consensus        89 ~hp~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  125 (316)
T 2xir_A           89 HHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRS  125 (316)
T ss_dssp             CCTTBCCEEEEECCTTSCCEEEEECCTTEEHHHHHHT
T ss_pred             cCCCeeeEEEEEecCCCceEEEEEcCCCCcHHHHHHh
Confidence            699999999987665 459999999999999877654

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=94.62  E-value=0.1  Score=43.11  Aligned_cols=39  Identities=28%  Similarity=0.523  Sum_probs=30.3

Q ss_pred             hhcCCCceeEEeeeeecCCe-----eEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQH-----VYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~-----~~~~~ey~~~~~l~~iih~  122 (160)
                      .++.||||+++++.+...+.     .+++|||+.|++|..++.+
T Consensus       134 ~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~  177 (681)
T 2pzi_A          134 AEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ  177 (681)
T ss_dssp             GGCCCTTBCCEEEEEEEECTTSCEEEEEEEECCCCEECC----C
T ss_pred             HhcCCCCcCeEeeeEeecCCCCCceeEEEEEeCCCCcHHHHHhC
Confidence            45889999999999887665     7999999999998765544

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=94.57  E-value=0.019  Score=41.96  Aligned_cols=38  Identities=26%  Similarity=0.523  Sum_probs=33.8

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .++.|||+++++..+...+..+++|||+.+++|..++.
T Consensus        68 ~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  105 (303)
T 2vwi_A           68 SQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIK  105 (303)
T ss_dssp             CCCCCTTBCCEEEEEESSSCEEEEEECCTTCBHHHHHH
T ss_pred             hhcCCCCEeeEEEEEeecCCcEEEehhccCCchHHHHH
Confidence            45789999999999999999999999999998876654

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=94.52  E-value=0.085  Score=41.07  Aligned_cols=78  Identities=19%  Similarity=0.281  Sum_probs=47.5

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecC-----CeeEEEEEec
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESD-----QHVYLVMEFC  111 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~-----~~~~~~~ey~  111 (160)
                      .+.+|.+.+...+..++.+..............+.. .+..+     ..+.|||++++++.+...     ..++++|||+
T Consensus        39 ~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~-E~~~l-----~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e~~  112 (432)
T 3n9x_A           39 YGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITIL-----NRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIA  112 (432)
T ss_dssp             TEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHH-HHHHH-----HHCCCTTBCCEEEECCCSCTTTCCCEEEEEECC
T ss_pred             CEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHH-HHHHH-----HHcCCCCcceEEEEEecCCCCcCCeEEEEEecC
Confidence            367888877665555555544332222222222222 22222     347899999999998766     6799999998


Q ss_pred             CCCCccccee
Q psy11428        112 NGGDLARIVH  121 (160)
Q Consensus       112 ~~~~l~~iih  121 (160)
                      .+ +|..++.
T Consensus       113 ~~-~L~~~~~  121 (432)
T 3n9x_A          113 DS-DLKKLFK  121 (432)
T ss_dssp             SE-EHHHHHH
T ss_pred             Cc-CHHHHHh
Confidence            75 6655544

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=94.49  E-value=0.019  Score=42.68  Aligned_cols=40  Identities=18%  Similarity=0.223  Sum_probs=35.1

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      ..+.|||++++++.+......+++|||+.+++|..++...
T Consensus        82 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~  121 (326)
T 3uim_A           82 SMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER  121 (326)
T ss_dssp             GTCCCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCC
T ss_pred             HhccCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhc
Confidence            3578999999999999999999999999999997766543

>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...

Probab=94.43  E-value=0.07  Score=38.89  Aligned_cols=86  Identities=27%  Similarity=0.351  Sum_probs=48.9

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.++.. ..+.+|.+.+...+..++.+..............+    ..++..  ..++.|||++++++.+...+..++
T Consensus         7 ~~~~lg~G-~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~----~~e~~~--l~~l~h~~i~~~~~~~~~~~~~~l   79 (299)
T 2r3i_A            7 KVEKIGEG-TYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTA----IREISL--LKELNHPNIVKLLDVIHTENKLYL   79 (299)
T ss_dssp             EEEEEEEC-SSSEEEEEEETTTCCEEEEEEC--------CCHHH----HHHHHH--HTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhhhhccC-CCeeEEEEEEcCCCceEEEEEeecCccchhhHHHH----HHHHHH--HHHcCCCCeeeEEEEEecCCceEE
Confidence            34444432 33678888776556555554432221111111111    112222  235789999999999999999999


Q ss_pred             EEEecCCCCcccce
Q psy11428        107 VMEFCNGGDLARIV  120 (160)
Q Consensus       107 ~~ey~~~~~l~~ii  120 (160)
                      +|||+.+ ++..++
T Consensus        80 v~e~~~~-~L~~~~   92 (299)
T 2r3i_A           80 VFEFLHQ-DLKKFM   92 (299)
T ss_dssp             EEECCSE-EHHHHH
T ss_pred             EEEcccC-CHHHHH
Confidence            9999984 665544

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=94.39  E-value=0.072  Score=40.55  Aligned_cols=77  Identities=29%  Similarity=0.387  Sum_probs=45.3

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC------eeEEEEEec
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ------HVYLVMEFC  111 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~------~~~~~~ey~  111 (160)
                      +.+|.+.+...+..++.+..............+.    .++..+  ..+.|||++++++.+....      .++++|||+
T Consensus        39 g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~----~E~~~l--~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~e~~  112 (367)
T 1cm8_A           39 GAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY----RELRLL--KHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM  112 (367)
T ss_dssp             -CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHH----HHHHHH--HHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC
T ss_pred             eEEEEEEECCCCCEEEEEEeCccccCHHHHHHHH----HHHHHH--HhCCCcCCCCceeeEecCCccccCceEEEEEecC
Confidence            5677777765565555554322222222222222    222222  3478999999999987664      469999999


Q ss_pred             CCCCccccee
Q psy11428        112 NGGDLARIVH  121 (160)
Q Consensus       112 ~~~~l~~iih  121 (160)
                       +++|..++.
T Consensus       113 -~~~L~~~~~  121 (367)
T 1cm8_A          113 -GTDLGKLMK  121 (367)
T ss_dssp             -SEEHHHHHH
T ss_pred             -CCCHHHHHh
Confidence             777765543

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=94.38  E-value=0.085  Score=39.25  Aligned_cols=74  Identities=12%  Similarity=0.095  Sum_probs=48.8

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeeecCCeeEEEEEecCCCC
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKESDQHVYLVMEFCNGGD  115 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~~~~~~~~~ey~~~~~  115 (160)
                      .+.+|++.+...+..++.++.........    + ...+..++     .+ .|||+++++..+......+++|||+ +++
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~----~-~~E~~~l~-----~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~   90 (330)
T 2izr_A           22 FGELRLGKNLYTNEYVAIKLEPMKSRAPQ----L-HLEYRFYK-----QLGSGDGIPQVYYFGPCGKYNAMVLELL-GPS   90 (330)
T ss_dssp             TTSEEEEEETTTTEEEEEEEEETTCSSCC----H-HHHHHHHH-----HHCSCTTSCCEEEEEEETTEEEEEEECC-CCB
T ss_pred             CceEEEEEECCCCcEEEEEEeccccchHH----H-HHHHHHHH-----HhhCCCCCCEEEEEEecCCccEEEEEeC-CCC
Confidence            35788888766665566655433221111    1 11112222     35 7999999999999999999999999 888


Q ss_pred             ccccee
Q psy11428        116 LARIVH  121 (160)
Q Consensus       116 l~~iih  121 (160)
                      |..++.
T Consensus        91 L~~~~~   96 (330)
T 2izr_A           91 LEDLFD   96 (330)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            876654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=94.33  E-value=0.078  Score=39.80  Aligned_cols=79  Identities=22%  Similarity=0.322  Sum_probs=48.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHH------HHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEec
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSED------TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFC  111 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~  111 (160)
                      +.+|++.+...+..++.+..........      ....+.. .+..+     ..+.|||++++++.+......+++|||+
T Consensus        38 g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~-E~~~l-----~~l~h~~Iv~~~~~~~~~~~~~lv~e~~  111 (335)
T 3dls_A           38 GFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL-EIAIL-----SRVEHANIIKVLDIFENQGFFQLVMEKH  111 (335)
T ss_dssp             CSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEH-HHHHH-----TTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred             EEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHH-HHHHH-----HhCCCCCEeeEEEEEeeCCEEEEEEEeC
Confidence            5778887766665566554443221110      0000001 11111     3478999999999999999999999998


Q ss_pred             CCC-Ccccceec
Q psy11428        112 NGG-DLARIVHR  122 (160)
Q Consensus       112 ~~~-~l~~iih~  122 (160)
                      .++ ++..++.+
T Consensus       112 ~~g~~l~~~~~~  123 (335)
T 3dls_A          112 GSGLDLFAFIDR  123 (335)
T ss_dssp             TTSCBHHHHHHT
T ss_pred             CCCccHHHHHHh
Confidence            766 77655543

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=94.25  E-value=0.073  Score=40.38  Aligned_cols=81  Identities=15%  Similarity=0.072  Sum_probs=36.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEee-------eeecC---------
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLH-------CKESD---------  101 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~-------~~~~~---------  101 (160)
                      +.+|++.+...+..++.+.................+....++.+  .. .|||+++++.       .+...         
T Consensus        76 g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l--~~-~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~  152 (371)
T 3q60_A           76 SVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARL--LG-ESPEEARDRRRLLLPSDAVAVQSQPPFAQLS  152 (371)
T ss_dssp             EEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHH--HC-----------CBCCCCEEEEETTSCSSSBCS
T ss_pred             EEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHh--cc-cChhhhhhceeEEeeehheecCCCCCeeecc
Confidence            45666666555545555544443332333322333332223332  23 7999887553       33222         


Q ss_pred             --------CeeEEEEEecCCCCcccceec
Q psy11428        102 --------QHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus       102 --------~~~~~~~ey~~~~~l~~iih~  122 (160)
                              ..++++|||+. ++|..++..
T Consensus       153 ~~~~~~~~~~~~lv~e~~~-~~L~~~l~~  180 (371)
T 3q60_A          153 PGQDDYAVANYLLLMPAAS-VDLELLFST  180 (371)
T ss_dssp             CC---CCEEEEEEEECCCS-EEHHHHHHH
T ss_pred             CCcccceeeeEEEEecCCC-CCHHHHHHH
Confidence                    34899999999 788776653

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=94.25  E-value=0.023  Score=42.49  Aligned_cols=20  Identities=30%  Similarity=0.526  Sum_probs=16.1

Q ss_pred             CCeeEEEEEecCCCCcccce
Q psy11428        101 DQHVYLVMEFCNGGDLARIV  120 (160)
Q Consensus       101 ~~~~~~~~ey~~~~~l~~ii  120 (160)
                      ...++++||||.+|++...+
T Consensus       134 ~~~~~lv~E~~~~g~ll~~~  153 (336)
T 2vuw_A          134 DDQLFIVLEFEFGGIDLEQM  153 (336)
T ss_dssp             TTCEEEEEEEECCCEETGGG
T ss_pred             cCeEEEEEEecCCCccHHHH
Confidence            78899999999998654443

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=94.22  E-value=0.021  Score=42.59  Aligned_cols=39  Identities=18%  Similarity=0.524  Sum_probs=32.3

Q ss_pred             hhcCCCceeEEeeeeecCC----eeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQ----HVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~----~~~~~~ey~~~~~l~~iih~  122 (160)
                      .++.|||++++++.+....    .++++|||+.+++|..++..
T Consensus        73 ~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  115 (322)
T 3soc_A           73 PGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKA  115 (322)
T ss_dssp             TTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH
T ss_pred             hcCCCCCchhhcceeccCCCCCceEEEEEecCCCCCHHHHHHh
Confidence            4578999999999987744    47999999999999776654

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=94.22  E-value=0.2  Score=41.42  Aligned_cols=36  Identities=25%  Similarity=0.661  Sum_probs=30.8

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ++.|||++++++.+. .+..+++|||+.+++|..++.
T Consensus       447 ~l~HpnIv~l~~~~~-~~~~~lv~E~~~~g~L~~~l~  482 (656)
T 2j0j_A          447 QFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQ  482 (656)
T ss_dssp             HCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHHH
T ss_pred             hCCCCCCCeEEEEEe-cCceEEEEEcCCCCcHHHHHH
Confidence            578999999999885 466899999999999977665

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=94.21  E-value=0.25  Score=35.75  Aligned_cols=38  Identities=21%  Similarity=0.401  Sum_probs=31.9

Q ss_pred             hcCCCceeEEeeeeecCCee-EEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHV-YLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~-~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||++++++.+...+.. +++|+|+.++++...+..
T Consensus        78 ~l~h~~iv~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~  116 (298)
T 3pls_A           78 GLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS  116 (298)
T ss_dssp             TCCCTTBCCCCEEECCSSSCCEEEECCCTTCBHHHHHHC
T ss_pred             hCCCCCeeeEEEEEecCCCCcEEEEecccCCCHHHHHhc
Confidence            57899999999999766665 999999999999776643

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=94.12  E-value=0.24  Score=36.36  Aligned_cols=36  Identities=25%  Similarity=0.395  Sum_probs=28.7

Q ss_pred             hcCCCceeEEeeeeecCCe-----eEEEEEecCCCCcccce
Q psy11428         85 ELHHENVVELLHCKESDQH-----VYLVMEFCNGGDLARIV  120 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~-----~~~~~ey~~~~~l~~ii  120 (160)
                      ++.|||+++++..+.....     .+++|||+.+++|..++
T Consensus        92 ~l~h~~iv~~~~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l  132 (313)
T 3brb_A           92 DFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYL  132 (313)
T ss_dssp             TCCCTTBCCCCEEEEC-------CEEEEEECCTTCBHHHHH
T ss_pred             cCCCCCeeeeeEEEeeccccCCcccEEEEecccCCCHHHHH
Confidence            5789999999998876553     59999999999987665

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=94.11  E-value=0.34  Score=37.86  Aligned_cols=38  Identities=29%  Similarity=0.551  Sum_probs=32.0

Q ss_pred             hcCCCceeEEeeeeecCC-eeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQ-HVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~-~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++.|||+++++..+.... .++++|||+.+++|..++..
T Consensus       242 ~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~L~~~l~~  280 (450)
T 1k9a_A          242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRS  280 (450)
T ss_dssp             TCCCTTBCCEEEEEECTTSCEEEEEECCTTCBHHHHHHH
T ss_pred             hccCCCEEEEEEEEEcCCCceEEEEEecCCCcHHHHHHh
Confidence            578999999999876554 79999999999999777654

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=94.09  E-value=0.17  Score=37.41  Aligned_cols=70  Identities=11%  Similarity=0.136  Sum_probs=44.1

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNG  113 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~  113 (160)
                      +.+|.+.+...+..++.+..... ...........++...     ...+.|||++++++.+...+..+++|||+.+
T Consensus        36 g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~~-----~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~  105 (327)
T 3aln_A           36 GSVNKMVHKPSGQIMAVKRIRST-VDEKEQKQLLMDLDVV-----MRSSDCPYIVQFYGALFREGDCWICMELMST  105 (327)
T ss_dssp             EEEEEEEETTTTEEEEEEEEECC-CCHHHHHHHHHHHHHH-----HSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred             EEEEEEEEcCCCCEEEEEEeecc-cCchHHHHHHHHHHHH-----HHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence            56777766555555555543332 2222222222222111     2347899999999999999999999999986

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=93.95  E-value=0.45  Score=35.02  Aligned_cols=73  Identities=16%  Similarity=0.263  Sum_probs=46.2

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeeec--CCeeEEEEEecCC
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKES--DQHVYLVMEFCNG  113 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~--~~~~~~~~ey~~~  113 (160)
                      .+.+|.+.+...+..++.++....  ...   .+ ...+..++     ++ .|||+++++..+..  ....+++|||+.+
T Consensus        49 ~g~V~~~~~~~~~~~vavK~~~~~--~~~---~~-~~E~~~l~-----~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~  117 (330)
T 3nsz_A           49 YSEVFEAINITNNEKVVVKILKPV--KKK---KI-KREIKILE-----NLRGGPNIITLADIVKDPVSRTPALVFEHVNN  117 (330)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECSC--CHH---HH-HHHHHHHH-----HHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred             CeEEEEEEECCCCcEEEEEEeccc--chH---HH-HHHHHHHH-----HcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence            356777776666655655543321  111   11 11222222     34 49999999999987  7778999999999


Q ss_pred             CCcccce
Q psy11428        114 GDLARIV  120 (160)
Q Consensus       114 ~~l~~ii  120 (160)
                      +++..++
T Consensus       118 ~~l~~~~  124 (330)
T 3nsz_A          118 TDFKQLY  124 (330)
T ss_dssp             CCHHHHG
T ss_pred             hhHHHHH
Confidence            9885543

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=93.92  E-value=0.24  Score=36.23  Aligned_cols=69  Identities=14%  Similarity=0.136  Sum_probs=42.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCN  112 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~  112 (160)
                      +.+|++.+...+..++.+......... .......++...     ...+.|||+++++..+......+++|||+.
T Consensus        39 g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~~~~~-----~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~  107 (318)
T 2dyl_A           39 GQVWKMRFRKTGHVIAVKQMRRSGNKE-ENKRILMDLDVV-----LKSHDCPYIVQCFGTFITNTDVFIAMELMG  107 (318)
T ss_dssp             -CEEEEEETTTCCEEEEEEEETTSCHH-HHHHHHHHHHHH-----HHTTTCTTBCCEEEEEECSSEEEEEECCCS
T ss_pred             eeEEEEEEecCCeEEEEEEecccccch-HHHHHHHHHHHH-----HHhcCCCceeeEEEEEecCCcEEEEEeccC
Confidence            567777765555555555443332222 222222222111     134689999999999999999999999993

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=93.90  E-value=0.11  Score=39.65  Aligned_cols=39  Identities=28%  Similarity=0.501  Sum_probs=32.5

Q ss_pred             hhcCCCceeEEeeee-ecCCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCK-ESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~-~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .++.|||+++++..+ ...+..+++|||+.+++|..++..
T Consensus       145 ~~l~hpnIv~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  184 (373)
T 3c1x_A          145 KDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRN  184 (373)
T ss_dssp             TTCCCTTBCCCCEEECCCSSCCEEEEECCTTCBHHHHHHC
T ss_pred             HhCCCCCcceEEEEEEcCCCCeEEEEECCCCCCHHHHHhh
Confidence            457899999999975 556788999999999999877654

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=93.84  E-value=0.05  Score=39.70  Aligned_cols=38  Identities=26%  Similarity=0.438  Sum_probs=31.1

Q ss_pred             hcCCCceeEEeeeeec--CCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKES--DQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~--~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||+++++..+..  ...++++|||+.+++|..++..
T Consensus        67 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  106 (295)
T 3ugc_A           67 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK  106 (295)
T ss_dssp             TCCCTTBCCEEEEECHHHHTSCEEEEECCTTCBHHHHHHH
T ss_pred             hCCCCCEeeEEEEEecCCCCceEEEEEeCCCCCHHHHHHh
Confidence            5789999999998744  4568999999999999776643

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=93.83  E-value=0.13  Score=38.20  Aligned_cols=37  Identities=22%  Similarity=0.222  Sum_probs=31.2

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++.|||++++++.+.... .+++++|+.++++...+..
T Consensus        73 ~l~h~~iv~~~~~~~~~~-~~~v~e~~~~g~L~~~l~~  109 (327)
T 3poz_A           73 SVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVRE  109 (327)
T ss_dssp             HCCBTTBCCEEEEEESSS-EEEEEECCTTCBHHHHHHH
T ss_pred             hCCCCCEeEEEEEEecCC-eEEEEEecCCCcHHHHHHh
Confidence            578999999999998755 7889999999998776654

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=93.83  E-value=0.057  Score=40.02  Aligned_cols=37  Identities=19%  Similarity=0.505  Sum_probs=31.9

Q ss_pred             hcCCCceeEEeeeeecC----CeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESD----QHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~----~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.|||+++++..+...    ...+++|||+.+++|..++.
T Consensus        87 ~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  127 (337)
T 3mdy_A           87 LMRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLK  127 (337)
T ss_dssp             TCCCTTBCCEEEEEEESCGGGCEEEEEECCCTTCBHHHHHH
T ss_pred             hhcCCCeeeEEEEEccCCCCCCceEEEEeccCCCcHHHHhh
Confidence            36899999999988777    78999999999999976654

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=93.83  E-value=0.046  Score=40.72  Aligned_cols=38  Identities=26%  Similarity=0.580  Sum_probs=32.4

Q ss_pred             hcCCCceeEEeeeeecCC----eeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQ----HVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~----~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||+++++..+....    ..+++|||+.+++|..++.+
T Consensus        92 ~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~  133 (342)
T 1b6c_B           92 MLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR  133 (342)
T ss_dssp             CCCCTTBCCEEEEEECCCSSCCCEEEEECCCTTCBHHHHHHH
T ss_pred             hcCCCcEEEEEeeecccCCccceeEEEEeecCCCcHHHHHhc
Confidence            378999999999988776    89999999999999766543

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=93.77  E-value=0.077  Score=38.63  Aligned_cols=37  Identities=22%  Similarity=0.372  Sum_probs=31.1

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||++++++.+ .....+++|||+.+++|..++..
T Consensus        74 ~l~h~~i~~~~~~~-~~~~~~lv~e~~~~~~L~~~l~~  110 (291)
T 1xbb_A           74 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQ  110 (291)
T ss_dssp             TCCCTTBCCEEEEE-ESSSEEEEEECCTTEEHHHHHHH
T ss_pred             hCCCCCEEEEEEEE-CCCCcEEEEEeCCCCCHHHHHHh
Confidence            47899999999988 56778999999999998766543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=93.77  E-value=0.2  Score=37.59  Aligned_cols=76  Identities=29%  Similarity=0.360  Sum_probs=44.9

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCe------eEEEEEec
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQH------VYLVMEFC  111 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~------~~~~~ey~  111 (160)
                      +.+|.+.+...+..++.+..............+..+ +..+     ..+.|||++++++.+.....      .+++|||+
T Consensus        38 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E-~~~l-----~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~e~~  111 (353)
T 3coi_A           38 GSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRE-LLLL-----KHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM  111 (353)
T ss_dssp             EEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHH-HHHH-----HHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC
T ss_pred             eEEEEEEECCCCCEEEEEEecccccchHHHHHHHHH-HHHH-----HhcCCCCcccHhheEecccccccceeEEEEeccc
Confidence            567777765555555554433322222222222221 1222     34789999999999887765      49999999


Q ss_pred             CCCCcccce
Q psy11428        112 NGGDLARIV  120 (160)
Q Consensus       112 ~~~~l~~ii  120 (160)
                      .+ ++...+
T Consensus       112 ~~-~l~~~~  119 (353)
T 3coi_A          112 QT-DLQKIM  119 (353)
T ss_dssp             SE-EGGGTT
T ss_pred             cC-CHHHHh
Confidence            84 665444

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=93.73  E-value=0.069  Score=43.96  Aligned_cols=37  Identities=24%  Similarity=0.416  Sum_probs=30.9

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++.||||++++..++. +..+++|||+.+++|..++..
T Consensus       426 ~l~hpnIv~l~~~~~~-~~~~lv~E~~~~g~L~~~l~~  462 (635)
T 4fl3_A          426 QLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQ  462 (635)
T ss_dssp             HCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHH
T ss_pred             hCCCCCEeeEEEEEec-CCEEEEEEccCCCCHHHHHhh
Confidence            4789999999998865 558899999999999776643

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=93.71  E-value=0.18  Score=38.32  Aligned_cols=77  Identities=29%  Similarity=0.339  Sum_probs=41.8

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecC------CeeEEEEEec
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESD------QHVYLVMEFC  111 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~------~~~~~~~ey~  111 (160)
                      +.+|.+.+...+..++.+..............+.    .++..+  ..+.|||++++++.+...      ..++++|+|+
T Consensus        43 g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~----~E~~~l--~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~e~~  116 (367)
T 2fst_X           43 GSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY----RELRLL--KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM  116 (367)
T ss_dssp             CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHH----HHHHHH--HHCCCTTBCCCSEEECSCSSGGGCCCCEEEEECC
T ss_pred             eEEEEEEECCCCCEEEEEEeCccccCHHHHHHHH----HHHHHH--HhCCCCCCCcEEEEEecCCccccCCeEEEEeccc
Confidence            4567776655454444443322212222222222    222222  347899999999988654      6689999998


Q ss_pred             CCCCccccee
Q psy11428        112 NGGDLARIVH  121 (160)
Q Consensus       112 ~~~~l~~iih  121 (160)
                       +++|..++.
T Consensus       117 -~~~L~~~~~  125 (367)
T 2fst_X          117 -GADLNNIVK  125 (367)
T ss_dssp             -CEECC----
T ss_pred             -CCCHHHHHh
Confidence             567765554

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=93.64  E-value=0.12  Score=38.00  Aligned_cols=36  Identities=36%  Similarity=0.629  Sum_probs=30.3

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++.|||++++++.+.  +..+++|||+.+++|..+++.
T Consensus        57 ~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~~~l~~   92 (307)
T 2eva_A           57 RVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHG   92 (307)
T ss_dssp             HCCCTTBCCEEEBCT--TTTEEEEECCTTCBHHHHHHC
T ss_pred             cCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHHHHHhc
Confidence            578999999999876  348999999999999777654

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=93.60  E-value=0.26  Score=35.39  Aligned_cols=36  Identities=22%  Similarity=0.584  Sum_probs=30.1

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ++.|||++++++.+. .+..+++|||+.+++|..++.
T Consensus        64 ~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~L~~~l~   99 (279)
T 1qpc_A           64 QLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLK   99 (279)
T ss_dssp             HCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTT
T ss_pred             hCCCcCcceEEEEEc-CCCcEEEEecCCCCCHHHHHh
Confidence            478999999998876 456899999999999976654

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=93.59  E-value=0.55  Score=33.75  Aligned_cols=37  Identities=27%  Similarity=0.554  Sum_probs=30.4

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||++++++.++. +..+++|||+.+++|..++.+
T Consensus        69 ~l~h~~i~~~~~~~~~-~~~~~v~e~~~~~~L~~~l~~  105 (281)
T 3cc6_A           69 NLDHPHIVKLIGIIEE-EPTWIIMELYPYGELGHYLER  105 (281)
T ss_dssp             HHCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHH
T ss_pred             hCCCCCcceEEEEEcC-CCCEEEEecCCCCCHHHHHHh
Confidence            4679999999998865 457899999999998766643

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=93.54  E-value=0.14  Score=41.37  Aligned_cols=38  Identities=8%  Similarity=0.079  Sum_probs=29.1

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++.|||++++.......+..+++|||+.|++|..++..
T Consensus       395 ~l~h~nIv~~~~~~~~~~~~~lVmE~~~ggsL~~~l~~  432 (540)
T 3en9_A          395 LVKDFGIPAPYIFDVDLDNKRIMMSYINGKLAKDVIED  432 (540)
T ss_dssp             HGGGGTCCCCCEEEEETTTTEEEEECCCSEEHHHHSTT
T ss_pred             hcCCCCcCceEEEEEeCCccEEEEECCCCCCHHHHHHH
Confidence            57899999555444466777999999999998766543

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=93.51  E-value=0.91  Score=33.93  Aligned_cols=108  Identities=19%  Similarity=0.274  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHhhcCCc-ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCH-----HHHHHHHHHHHHHHHHh
Q psy11428          8 SIVLTRHILKELTELHHE-NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSE-----DTIRIFLKQIVQALKAF   81 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~-~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~   81 (160)
                      +....+..+..+..+... .+.+.++.. ..+.+|.+.+. .+..++.+.........     .........+..++..+
T Consensus         6 ~~~~~~~~~~~~~~~~~~y~~~~~lg~G-~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   83 (362)
T 3pg1_A            6 GEAAMRDLIAELHAMQSPYTVQRFISSG-SYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLL   83 (362)
T ss_dssp             CHHHHHHHHHHHHHTTCSCEEEEEEEEE-TTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHhccceEEeEEeccC-CCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHH
Confidence            334444555556666544 455566543 34667877653 24445544332211110     00001111122222222


Q ss_pred             hhhhcCCCceeEEeeee-----ecCCeeEEEEEecCCCCcccce
Q psy11428         82 QVKELHHENVVELLHCK-----ESDQHVYLVMEFCNGGDLARIV  120 (160)
Q Consensus        82 ~~~~l~h~niv~~~~~~-----~~~~~~~~~~ey~~~~~l~~ii  120 (160)
                        ..+.|||++++++.+     .....++++|||+.| ++...+
T Consensus        84 --~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~~~~-~l~~~~  124 (362)
T 3pg1_A           84 --NHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVI  124 (362)
T ss_dssp             --HHCCCTTBCCCSEEEEECCTTTCCEEEEEEECCSE-EHHHHH
T ss_pred             --HhCCCcCccceeeeEEeccCCCcceEEEEEccCCC-CHHHHH
Confidence              347899999999988     444568999999985 554443

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=93.49  E-value=0.24  Score=37.99  Aligned_cols=34  Identities=32%  Similarity=0.653  Sum_probs=28.7

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      +|||++++++.+...+.++++|| +.+++|..++.
T Consensus       114 ~~~~iv~~~~~~~~~~~~~lv~E-~~~~~L~~~l~  147 (390)
T 2zmd_A          114 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK  147 (390)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEE-CCSEEHHHHHH
T ss_pred             CCCeEEEEEEEEecCCEEEEEEe-cCCCCHHHHHH
Confidence            47999999999999999999999 56777766554

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=93.48  E-value=0.22  Score=37.81  Aligned_cols=76  Identities=29%  Similarity=0.349  Sum_probs=44.9

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCee------EEEEEec
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHV------YLVMEFC  111 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~------~~~~ey~  111 (160)
                      +.+|++.+...+..++.+..............+.. .+..+     ..+.|||++++++.+......      +++|||+
T Consensus        56 g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~-E~~~l-----~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~e~~  129 (371)
T 4exu_A           56 GSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLL-----KHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM  129 (371)
T ss_dssp             EEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHH-HHHHH-----HHCCCTTBCCCSEEECSCSSSTTCCCCEEEEECC
T ss_pred             eEEEEEEECCCCCEEEEEEecccccchhHHHHHHH-HHHHH-----HhcCCCCchhhhhheeccCCcccceeEEEEEccc
Confidence            56677766555555555443332223222222222 12222     347899999999999887765      9999999


Q ss_pred             CCCCcccce
Q psy11428        112 NGGDLARIV  120 (160)
Q Consensus       112 ~~~~l~~ii  120 (160)
                      .+ ++...+
T Consensus       130 ~~-~l~~~~  137 (371)
T 4exu_A          130 QT-DLQKIM  137 (371)
T ss_dssp             CE-EHHHHT
T ss_pred             cc-cHHHHh
Confidence            84 554433

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=93.46  E-value=0.29  Score=35.47  Aligned_cols=37  Identities=22%  Similarity=0.465  Sum_probs=29.7

Q ss_pred             hcCCCceeEEeeeee----cCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKE----SDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~----~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.|||+++++..+.    .....+++|||+.+++|..++.
T Consensus        58 ~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~   98 (301)
T 3q4u_A           58 MLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQ   98 (301)
T ss_dssp             CCCCTTBCCEEEEEEEEETTEEEEEEEECCCTTCBHHHHHT
T ss_pred             hccCcCeeeEEEeeccccCCCceeEEehhhccCCCHHHHHh
Confidence            478999999988743    3456899999999999976653

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=93.43  E-value=0.31  Score=35.98  Aligned_cols=38  Identities=32%  Similarity=0.515  Sum_probs=32.2

Q ss_pred             hcCCCceeEEeeeeec--CCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKES--DQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~--~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||+++++..+..  ...++++|||+.+++|..++.+
T Consensus        89 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  128 (318)
T 3lxp_A           89 TLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPR  128 (318)
T ss_dssp             HCCCTTBCCEEEEEEETTTTEEEEEECCCTTCBHHHHGGG
T ss_pred             hCCCcchhhEEEEEecCCCceEEEEEecccCCcHHHHHhh
Confidence            4779999999999887  4678999999999999776644

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=93.38  E-value=0.046  Score=39.96  Aligned_cols=37  Identities=32%  Similarity=0.475  Sum_probs=31.3

Q ss_pred             hcCCCceeEEeeeeecC--CeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESD--QHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~--~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.|||++++++.+...  ..++++|||+.+++|..++.
T Consensus        79 ~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  117 (302)
T 4e5w_A           79 NLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLP  117 (302)
T ss_dssp             TCCCTTBCCEEEEEEC---CCEEEEEECCTTCBHHHHHH
T ss_pred             hCCCCCeeeeeeEEecCCCceEEEEEEeCCCCcHHHHHH
Confidence            47899999999998776  67899999999999977663

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=93.31  E-value=0.071  Score=39.17  Aligned_cols=78  Identities=26%  Similarity=0.307  Sum_probs=46.7

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecC-------CCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC-----ee
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGT-------LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ-----HV  104 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~-----~~  104 (160)
                      .+.+|++.+...+..++.+......       ......     .....++.  ...+.|||++++++.+....     .+
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~-----~e~~~l~~--l~~~~h~niv~~~~~~~~~~~~~~~~~   94 (308)
T 3g33_A           22 YGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTV-----REVALLRR--LEAFEHPNVVRLMDVCATSRTDREIKV   94 (308)
T ss_dssp             SCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHH-----HHHHHHHH--HHHHCCTTBCCEEEEEEECCSSSEEEE
T ss_pred             CeEEEEEEECCCCcEEEEEEEecccccccccccchhHH-----HHHHHHHH--HhhcCCCCeEEeeeeeeccCCCCceeE
Confidence            3578888776666666666543211       111111     11112221  12457999999999987765     58


Q ss_pred             EEEEEecCCCCcccceec
Q psy11428        105 YLVMEFCNGGDLARIVHR  122 (160)
Q Consensus       105 ~~~~ey~~~~~l~~iih~  122 (160)
                      +++|||+.+ ++..++..
T Consensus        95 ~lv~e~~~~-~L~~~~~~  111 (308)
T 3g33_A           95 TLVFEHVDQ-DLRTYLDK  111 (308)
T ss_dssp             EEEEECCCC-BHHHHHHT
T ss_pred             EEEehhhhc-CHHHHHhh
Confidence            999999985 76555443

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=93.09  E-value=0.24  Score=37.03  Aligned_cols=81  Identities=25%  Similarity=0.213  Sum_probs=41.7

Q ss_pred             CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecC-CCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecC
Q psy11428         23 HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESD  101 (160)
Q Consensus        23 ~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~  101 (160)
                      ..-.+.+.++.. ..+.+|++.+...+..++.+...... ......     +.+..+     ..+.|||+++++..+...
T Consensus        23 ~~y~~~~~lg~G-~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~-----~~~~~l-----~~l~h~niv~~~~~~~~~   91 (360)
T 3e3p_A           23 DRFQVERMAGQG-TFGTVQLGKEKSTGMSVAIKKVIQDPRFRNREL-----QIMQDL-----AVLHHPNIVQLQSYFYTL   91 (360)
T ss_dssp             TTEEEC-----------CEEEEETTTCCEEEEEEEECCTTCCCHHH-----HHHHHH-----HHHCCTTBCCEEEEEEEE
T ss_pred             cceEEEEEEecC-CCeEEEEEEECCCCCEEEEEEEecCccccHHHH-----HHHHHH-----HhcCCCCcccHHHhhhcc
Confidence            333444444432 22567887776556556655433221 111111     111111     246899999999988654


Q ss_pred             Ce-------eEEEEEecCCC
Q psy11428        102 QH-------VYLVMEFCNGG  114 (160)
Q Consensus       102 ~~-------~~~~~ey~~~~  114 (160)
                      ..       ++++|||+.++
T Consensus        92 ~~~~~~~~~~~lv~e~~~~~  111 (360)
T 3e3p_A           92 GERDRRDIYLNVVMEYVPDT  111 (360)
T ss_dssp             CSSCTTCEEEEEEEECCSCB
T ss_pred             ccccccceeEEEEeeccccc
Confidence            43       88999999875

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=93.03  E-value=0.22  Score=37.20  Aligned_cols=71  Identities=27%  Similarity=0.323  Sum_probs=41.7

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec--------CCeeEEEE
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES--------DQHVYLVM  108 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~--------~~~~~~~~  108 (160)
                      .+.+|++.+...+..++.+..............+.. .+..+     ..+.|||++++++.+..        .+.++++|
T Consensus        30 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~-E~~~l-----~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~  103 (351)
T 3mi9_A           30 FGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR-EIKIL-----QLLKHENVVNLIEICRTKASPYNRCKGSIYLVF  103 (351)
T ss_dssp             TTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHH-HHHHH-----HHCCCTTBCCEEEEEEEC--------CEEEEEE
T ss_pred             CcEEEEEEECCCCCEEEEEEEecccccccchHHHHH-HHHHH-----HhccCCCcccHhheeeccccccccCCceEEEEE
Confidence            357888877666655655543222221111111111 11222     24789999999998877        45689999


Q ss_pred             EecCC
Q psy11428        109 EFCNG  113 (160)
Q Consensus       109 ey~~~  113 (160)
                      ||+.+
T Consensus       104 e~~~~  108 (351)
T 3mi9_A          104 DFCEH  108 (351)
T ss_dssp             ECCSE
T ss_pred             eccCC
Confidence            99986

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=92.91  E-value=0.1  Score=38.13  Aligned_cols=31  Identities=42%  Similarity=0.872  Sum_probs=24.5

Q ss_pred             hhcCCCceeEEeeee--ecCCeeEEEEEecCCC
Q psy11428         84 KELHHENVVELLHCK--ESDQHVYLVMEFCNGG  114 (160)
Q Consensus        84 ~~l~h~niv~~~~~~--~~~~~~~~~~ey~~~~  114 (160)
                      ..+.|||++++++.+  ......+++|||+.++
T Consensus        61 ~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~   93 (305)
T 2wtk_C           61 RRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG   93 (305)
T ss_dssp             TTCCCTTBCCEEEEEECC---CEEEEEECCSEE
T ss_pred             HhcCCCCeeEEEEEEEcCCCCeEEEEehhccCC
Confidence            357899999999988  5566899999999876

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=92.86  E-value=0.41  Score=34.69  Aligned_cols=36  Identities=19%  Similarity=0.503  Sum_probs=29.7

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.|||+++++.. ......+++|||+.++++...++
T Consensus        76 ~l~h~~iv~~~~~-~~~~~~~lv~e~~~~~~L~~~l~  111 (289)
T 3og7_A           76 KTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLH  111 (289)
T ss_dssp             TCCCTTBCCEEEE-ECSSSCEEEEECCCEEEHHHHHT
T ss_pred             hCCCCcEEEEEee-ccCCccEEEEEecCCCcHHHHHh
Confidence            5789999999885 45667899999999998866654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=92.84  E-value=0.039  Score=43.31  Aligned_cols=38  Identities=26%  Similarity=0.545  Sum_probs=32.1

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .++.|||+++++..+. ....+++|||+.+|+|..+++.
T Consensus       238 ~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~L~~~l~~  275 (454)
T 1qcf_A          238 KTLQHDKLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKS  275 (454)
T ss_dssp             TTCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHHS
T ss_pred             hhCCCCCEeeEEEEEe-CCccEEEEeecCCCcHHHHHHh
Confidence            3578999999998876 6678999999999999777653

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=92.81  E-value=0.18  Score=37.77  Aligned_cols=90  Identities=22%  Similarity=0.281  Sum_probs=48.9

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeE
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY  105 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~  105 (160)
                      .+.+.++.. ..+.+|.+.+...+..++.+........... ......+..++..+  ..+.|||++++++.+......+
T Consensus        13 ~~~~~lg~G-~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~~~~~E~~~l--~~l~h~~iv~~~~~~~~~~~~~   88 (346)
T 1ua2_A           13 EKLDFLGEG-QFATVYKARDKNTNQIVAIKKIKLGHRSEAK-DGINRTALREIKLL--QELSHPNIIGLLDAFGHKSNIS   88 (346)
T ss_dssp             CEEEEEEEE-TTEEEEEEECSSCCSEEEEEEC-------------CTHHHHHHHHH--HHCCCTTBCCEEEEECCTTCCE
T ss_pred             EEEeEEeec-CCEEEEEEEECCCCcEEEEEEEecCCcchhh-hhhhHHHHHHHHHH--hhCCCCCCCeEEEEEeeCCceE
Confidence            345555432 3356788776555555555443221111100 00001111122221  3478999999999999999999


Q ss_pred             EEEEecCCCCcccce
Q psy11428        106 LVMEFCNGGDLARIV  120 (160)
Q Consensus       106 ~~~ey~~~~~l~~ii  120 (160)
                      ++|||+.+ ++...+
T Consensus        89 lv~e~~~~-~l~~~~  102 (346)
T 1ua2_A           89 LVFDFMET-DLEVII  102 (346)
T ss_dssp             EEEECCSE-EHHHHH
T ss_pred             EEEEcCCC-CHHHHH
Confidence            99999987 554433

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=92.80  E-value=0.61  Score=34.41  Aligned_cols=37  Identities=27%  Similarity=0.383  Sum_probs=30.9

Q ss_pred             hcCCCceeEEeeeee--cCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKE--SDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~--~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+.|||+++++..+.  .....+++|||+.+++|..++.
T Consensus        80 ~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  118 (327)
T 3lxl_A           80 ALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQ  118 (327)
T ss_dssp             TCCCTTBCCEEEEEECSSSCEEEEEEECCTTCBHHHHHH
T ss_pred             hcCCCceeEEEEEEecCCCceEEEEEeecCCCCHHHHHH
Confidence            578999999988775  5667999999999999876654

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=92.78  E-value=0.043  Score=41.52  Aligned_cols=35  Identities=20%  Similarity=0.410  Sum_probs=31.8

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      +|||+++++..+......+++|||+.+++|..++.
T Consensus       117 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  151 (355)
T 1vzo_A          117 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLS  151 (355)
T ss_dssp             TCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHH
T ss_pred             CCCceeEEEEEEeeCceEEEEeecCCCCCHHHHHH
Confidence            69999999999999999999999999999976654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=92.72  E-value=0.04  Score=43.24  Aligned_cols=36  Identities=28%  Similarity=0.581  Sum_probs=31.4

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ++.|||+++++..+.. +..+++|||+.+++|..++.
T Consensus       235 ~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL~~~l~  270 (452)
T 1fmk_A          235 KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK  270 (452)
T ss_dssp             HCCCTTBCCEEEEECS-SSCEEEECCCTTCBHHHHHS
T ss_pred             hCCCCCEeeEEEEEcC-CceEEEehhhcCCCHHHHHH
Confidence            5789999999998876 77899999999999977765

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=92.63  E-value=0.03  Score=41.32  Aligned_cols=39  Identities=28%  Similarity=0.521  Sum_probs=34.4

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .++.|||++++++.+......+++|||+.+++|..++..
T Consensus        84 ~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~  122 (319)
T 2y4i_B           84 RQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD  122 (319)
T ss_dssp             TTCCCTTBCCCCEEEECSSCEEEECBCCCSEEHHHHTTS
T ss_pred             hcCCCCCEeEEEEEEecCCceEEEeecccCCcHHHHHHh
Confidence            357899999999999999999999999999988776643

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=92.46  E-value=0.15  Score=38.52  Aligned_cols=38  Identities=21%  Similarity=0.319  Sum_probs=31.0

Q ss_pred             hhcCCCceeEEeeeeecC----CeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESD----QHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~----~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ..+.|||+++++..+...    ...+++|||+ |++|..++..
T Consensus       103 ~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~  144 (364)
T 3op5_A          103 RKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA  144 (364)
T ss_dssp             TTCSCCCSCCEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHH
T ss_pred             hhccCCCCCeEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHh
Confidence            568899999999988664    5589999999 8888766543

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=92.43  E-value=0.33  Score=35.11  Aligned_cols=84  Identities=13%  Similarity=0.091  Sum_probs=52.0

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeeecCCeeE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKESDQHVY  105 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~~~~~~  105 (160)
                      +.+.++.- ..+.+|.+.+...+..++.+............     .....++     .+ +|||++.++..+......+
T Consensus        14 ~~~~lg~G-~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~-----~e~~~~~-----~l~~~~~i~~~~~~~~~~~~~~   82 (298)
T 1csn_A           14 VGRRIGEG-SFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLR-----DEYRTYK-----LLAGCTGIPNVYYFGQEGLHNV   82 (298)
T ss_dssp             EEEEEEEC-SSCEEEEEEETTTTEEEEEEEEECCTTSCCHH-----HHHHHHH-----HTTTCTTCCCEEEEEEETTEEE
T ss_pred             EEEEEeec-CCEEEEEEEECCCCcEEEEEEeccCCccHHHH-----HHHHHHH-----HHhcCCCCCeEEeecCCCceeE
Confidence            33444422 33578888776656566655443322211111     1112222     23 6899999999999999999


Q ss_pred             EEEEecCCCCcccceec
Q psy11428        106 LVMEFCNGGDLARIVHR  122 (160)
Q Consensus       106 ~~~ey~~~~~l~~iih~  122 (160)
                      ++|||+ +++|..++..
T Consensus        83 lv~e~~-~~~L~~~l~~   98 (298)
T 1csn_A           83 LVIDLL-GPSLEDLLDL   98 (298)
T ss_dssp             EEEECC-CCBHHHHHHH
T ss_pred             EEEEec-CCCHHHHHHH
Confidence            999999 8888776653

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=92.17  E-value=0.6  Score=37.39  Aligned_cols=36  Identities=28%  Similarity=0.581  Sum_probs=31.4

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ++.|||+++++..+.. +.++++|||+.+++|..++.
T Consensus       318 ~l~hpniv~~~~~~~~-~~~~lv~e~~~~gsL~~~l~  353 (535)
T 2h8h_A          318 KLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLK  353 (535)
T ss_dssp             HCCCTTBCCEEEEECS-SSCEEEECCCTTEEHHHHHS
T ss_pred             hCCCCCEeeEEEEEee-ccceEeeehhcCCcHHHHHh
Confidence            5789999999998876 77999999999999977765

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=92.04  E-value=0.44  Score=35.57  Aligned_cols=35  Identities=31%  Similarity=0.660  Sum_probs=28.4

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ++||+++++..+...+.++++|| +.+++|..++..
T Consensus        67 ~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~~  101 (343)
T 3dbq_A           67 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKK  101 (343)
T ss_dssp             TCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHHH
T ss_pred             cCCceEEEeeeEeeCCEEEEEEe-CCCCCHHHHHHh
Confidence            34999999999999999999999 566677655543

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=91.98  E-value=0.076  Score=39.46  Aligned_cols=37  Identities=27%  Similarity=0.365  Sum_probs=30.9

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||++++++.+. ....+++|||+.++++...+..
T Consensus        71 ~l~h~~iv~~~~~~~-~~~~~~v~e~~~~~~L~~~l~~  107 (325)
T 3kex_A           71 SLDHAHIVRLLGLCP-GSSLQLVTQYLPLGSLLDHVRQ  107 (325)
T ss_dssp             TCCCTTBCCEEEEEC-BSSEEEEEECCTTCBSHHHHHS
T ss_pred             cCCCCCcCeEEEEEc-CCccEEEEEeCCCCCHHHHHHH
Confidence            478999999999886 5668999999999999766543

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=91.68  E-value=0.78  Score=33.82  Aligned_cols=38  Identities=21%  Similarity=0.455  Sum_probs=29.1

Q ss_pred             hhcCCCceeEEeeee-----ecCCeeEEEEEecCCCCccccee
Q psy11428         84 KELHHENVVELLHCK-----ESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        84 ~~l~h~niv~~~~~~-----~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ..+.|||+++++...     .....++++|||+.+++|..++.
T Consensus        62 ~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~  104 (336)
T 3g2f_A           62 PLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLS  104 (336)
T ss_dssp             TTCCCTTBCCEEEEEEEECTTSCEEEEEEECCCTTCBHHHHHH
T ss_pred             HhccCcchhhheecccccccCCCceEEEEEecCCCCcHHHHHh
Confidence            457899999998633     33446799999999999976654

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=91.55  E-value=0.84  Score=33.45  Aligned_cols=36  Identities=19%  Similarity=0.254  Sum_probs=30.0

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ...++++++++..++..+..+++|||+ ++++...+.
T Consensus        73 ~~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~l~~~l~  108 (339)
T 1z57_A           73 PNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIK  108 (339)
T ss_dssp             TTCTTCBCCEEEEEEETTEEEEEEECC-CCBHHHHHH
T ss_pred             CCCceeeEeeecccccCCcEEEEEcCC-CCCHHHHHH
Confidence            356778999999999999999999999 777765553

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=91.45  E-value=0.052  Score=39.93  Aligned_cols=35  Identities=29%  Similarity=0.359  Sum_probs=26.1

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEe-cCCCCccccee
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEF-CNGGDLARIVH  121 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey-~~~~~l~~iih  121 (160)
                      .|||++++++.+...+..+++||| +.+++|..++.
T Consensus        96 ~h~~i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~  131 (312)
T 2iwi_A           96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYIT  131 (312)
T ss_dssp             CCSSBCCEEEEC-----CEEEEECCSSEEEHHHHHH
T ss_pred             CCCCeeeEEEEEecCCeEEEEEEecCCCCCHHHHHH
Confidence            799999999999999999999999 78888866554

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=91.22  E-value=0.42  Score=36.58  Aligned_cols=29  Identities=31%  Similarity=0.631  Sum_probs=25.4

Q ss_pred             hcCCCceeEEeeee--ecCCeeEEEEEecCC
Q psy11428         85 ELHHENVVELLHCK--ESDQHVYLVMEFCNG  113 (160)
Q Consensus        85 ~l~h~niv~~~~~~--~~~~~~~~~~ey~~~  113 (160)
                      .+.|||+++++..+  .....++++|||+.+
T Consensus        74 ~l~hpniv~~~~~~~~~~~~~~~lv~e~~~~  104 (405)
T 3rgf_A           74 ELKHPNVISLQKVFLSHADRKVWLLFDYAEH  104 (405)
T ss_dssp             HCCCTTBCCCCEEEEETTTTEEEEEEECCSE
T ss_pred             hcCCCCeeeEeeEEecCCCCeEEEEEeCCCC
Confidence            47899999999998  557889999999986

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=91.03  E-value=0.072  Score=41.56  Aligned_cols=36  Identities=28%  Similarity=0.593  Sum_probs=30.9

Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ..|||+++++..+...+.++++||||. ++|..++..
T Consensus        66 ~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL~~~l~~  101 (434)
T 2rio_A           66 DDHPNVIRYYCSETTDRFLYIALELCN-LNLQDLVES  101 (434)
T ss_dssp             TTSTTBCCEEEEEECSSEEEEEECCCS-EEHHHHHHT
T ss_pred             cCCCCcCeEEEEEecCCeEEEEEecCC-CCHHHHHhc
Confidence            379999999999999999999999996 488666543

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=91.00  E-value=0.11  Score=38.45  Aligned_cols=29  Identities=21%  Similarity=0.359  Sum_probs=23.6

Q ss_pred             cceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428        118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus       118 ~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      .++|+|+.+.|++++.+          ..+.++||+.+.
T Consensus       223 ~l~HgD~~~~Nil~~~~----------~~~~lIDfe~a~  251 (346)
T 2q83_A          223 NLCHQDYGTGNTLLGEN----------EQIWVIDLDTVS  251 (346)
T ss_dssp             CEECSSCSTTSEEECGG----------GCEEECCCTTCE
T ss_pred             ceecCCCCcccEEEeCC----------CcEEEEehhhcc
Confidence            58999999999999632          257899998764

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=90.86  E-value=0.59  Score=34.50  Aligned_cols=38  Identities=26%  Similarity=0.416  Sum_probs=30.5

Q ss_pred             hcCCCceeEEeeeeecCC--eeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQ--HVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~--~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||+++++..+....  .++++|||+.+++|..++..
T Consensus        98 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~  137 (326)
T 2w1i_A           98 SLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQK  137 (326)
T ss_dssp             TCCCTTBCCEEEEECC----CCEEEECCCTTCBHHHHHHH
T ss_pred             hCCCCCeeeEEEEEEecCCCceEEEEECCCCCCHHHHHHh
Confidence            478999999998876544  78999999999999776654

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=90.81  E-value=0.38  Score=36.54  Aligned_cols=50  Identities=20%  Similarity=0.220  Sum_probs=29.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecC-CCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES  100 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~  100 (160)
                      +.+|.+.+...+..++.+...... ....        .+..+     ..+.|||++++++.+..
T Consensus        21 g~V~~a~~~~~~~~vAiK~~~~~~~~~~~--------E~~il-----~~l~hpnIv~l~~~~~~   71 (383)
T 3eb0_A           21 GIVCEVFDIESGKRFALKKVLQDPRYKNR--------ELDIM-----KVLDHVNIIKLVDYFYT   71 (383)
T ss_dssp             EEEEEEEETTTCCEEEEEEEECCTTSCCH--------HHHHH-----TTCCCTTBCCEEEEEEE
T ss_pred             EEEEEEEECCCCCEEEEEEEecCcchHHH--------HHHHH-----HHcCCCCccchhheeee
Confidence            567888776666666665443221 1111        11122     35789999999998843

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=90.59  E-value=0.066  Score=38.69  Aligned_cols=38  Identities=29%  Similarity=0.513  Sum_probs=29.6

Q ss_pred             hhcCCCceeEEeeeee-cCCeeEEEEEecCCCCccccee
Q psy11428         84 KELHHENVVELLHCKE-SDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~-~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ..+.|||++++++.+. ..+..+++|||+.+++|..++.
T Consensus        69 ~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~  107 (278)
T 1byg_A           69 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR  107 (278)
T ss_dssp             TTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHH
T ss_pred             HhCCCCCEeeEEEEEEcCCCceEEEEecCCCCCHHHHHH
Confidence            3578999999999854 4457999999999998866553

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=90.36  E-value=1.2  Score=34.42  Aligned_cols=37  Identities=16%  Similarity=0.292  Sum_probs=30.4

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      ....|+|+++++..+.....++++|||+.+ ++...+.
T Consensus       154 ~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~-~L~~~l~  190 (429)
T 3kvw_A          154 DKDNTMNVIHMLENFTFRNHICMTFELLSM-NLYELIK  190 (429)
T ss_dssp             CTTSCSCBCCEEEEEEETTEEEEEECCCCC-BHHHHHH
T ss_pred             cccCCcCEEEEEeecccCCeEEEEEeccCC-CHHHHHH
Confidence            345899999999999999999999999974 6655443

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=90.24  E-value=0.91  Score=33.01  Aligned_cols=74  Identities=20%  Similarity=0.347  Sum_probs=42.8

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeee--------------ecCCe
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCK--------------ESDQH  103 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~--------------~~~~~  103 (160)
                      +.+|.+.+...+..++.+.....  .......+.    .++..  ..++.|||++++++.+              .....
T Consensus        25 g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~----~e~~~--l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~   96 (320)
T 2i6l_A           25 GLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHAL----REIKI--IRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNS   96 (320)
T ss_dssp             -CEEEEEETTTTEEEEEEEEECC--SHHHHHHHH----HHHHH--HHTCCCTTBCCEEEEECTTSCBCCC----CCSCSE
T ss_pred             eEEEEEEECCCCeEEEEEEEecC--ChHHHHHHH----HHHHH--HHhcCCCCeeEEEEeccccccccccccccccccCc
Confidence            56777776554544554433221  222222222    22222  1357899999998876              34578


Q ss_pred             eEEEEEecCCCCcccce
Q psy11428        104 VYLVMEFCNGGDLARIV  120 (160)
Q Consensus       104 ~~~~~ey~~~~~l~~ii  120 (160)
                      .+++|||+.+ ++..++
T Consensus        97 ~~lv~e~~~~-~L~~~~  112 (320)
T 2i6l_A           97 VYIVQEYMET-DLANVL  112 (320)
T ss_dssp             EEEEEECCSE-EHHHHH
T ss_pred             eeEEeeccCC-CHHHHh
Confidence            8999999984 675554

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=90.16  E-value=0.41  Score=36.14  Aligned_cols=75  Identities=23%  Similarity=0.250  Sum_probs=41.7

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhh---hhhcCCCceeEEeeeee----cCCeeEEEEEe
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQ---VKELHHENVVELLHCKE----SDQHVYLVMEF  110 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~h~niv~~~~~~~----~~~~~~~~~ey  110 (160)
                      +.+|++.+...+..++.+....   .......+. ..+..++.+.   ....+|||+++++..+.    ....++++|||
T Consensus        51 g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~-~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~lv~e~  126 (397)
T 1wak_A           51 STVWLSWDIQGKKFVAMKVVKS---AEHYTETAL-DEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEV  126 (397)
T ss_dssp             EEEEEEEETTTTEEEEEEEECS---CHHHHHHHH-HHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEEEEEEECC
T ss_pred             eeEEEEEecCCCeEEEEEEEec---CCcchHHHH-HHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCceEEEEEec
Confidence            5677776655444455444322   111111122 2222232222   22235899999999887    66789999999


Q ss_pred             cCCCCc
Q psy11428        111 CNGGDL  116 (160)
Q Consensus       111 ~~~~~l  116 (160)
                      +.+..+
T Consensus       127 ~~~~l~  132 (397)
T 1wak_A          127 LGHHLL  132 (397)
T ss_dssp             CCCBHH
T ss_pred             cCccHH
Confidence            955433

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=89.99  E-value=0.1  Score=43.41  Aligned_cols=38  Identities=34%  Similarity=0.692  Sum_probs=32.0

Q ss_pred             hcCCCceeEEeeeeec------CCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKES------DQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~------~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||++++++.+..      .+..+++|||+.|++|..++..
T Consensus        68 ~L~HpnIV~l~~v~~~~~~~~~~~~~~LVmEy~~ggsL~~~L~~  111 (676)
T 3qa8_A           68 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQ  111 (676)
T ss_dssp             HCCBTTBCCEEECCTTTCCCCTTSSCCCEEECCSSCBHHHHHHS
T ss_pred             hCCCCCCCceeeeecccccccCCCeEEEEEEeCCCCCHHHHHHh
Confidence            4789999999888765      7778999999999999776654

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=89.80  E-value=0.21  Score=37.03  Aligned_cols=36  Identities=31%  Similarity=0.556  Sum_probs=30.3

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccce
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV  120 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~ii  120 (160)
                      ..+.|||++++++.+...+..+++|||+.+ ++...+
T Consensus        55 ~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~l~~~~   90 (324)
T 3mtl_A           55 KDLKHANIVTLHDIIHTEKSLTLVFEYLDK-DLKQYL   90 (324)
T ss_dssp             SCCCCTTBCCEEEEEECSSCEEEEEECCSE-EHHHHH
T ss_pred             HhcCCCCCCeeeeEEeeCCEEEEEeccccc-CHHHHH
Confidence            357899999999999999999999999985 554443

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=89.52  E-value=1.4  Score=32.08  Aligned_cols=34  Identities=32%  Similarity=0.653  Sum_probs=28.1

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      +|||++++++.+......+++|| +.+++|..++.
T Consensus        86 ~~~~iv~~~~~~~~~~~~~lv~e-~~~~~L~~~l~  119 (313)
T 3cek_A           86 HSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLK  119 (313)
T ss_dssp             GCTTBCCEEEEEECSSEEEEEEC-CCSEEHHHHHH
T ss_pred             cCCceEEEEEEeecCCEEEEEEe-cCCCcHHHHHH
Confidence            37999999999999999999999 56667755543

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=89.09  E-value=0.45  Score=35.34  Aligned_cols=37  Identities=22%  Similarity=0.222  Sum_probs=30.9

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+.|||++++++.+.... .+++++|+.++++...+..
T Consensus        73 ~l~hp~iv~~~~~~~~~~-~~~v~~~~~~g~L~~~l~~  109 (327)
T 3lzb_A           73 SVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVRE  109 (327)
T ss_dssp             TCCBTTBCCCCEEEESSS-EEEEECCCSSCBHHHHHHH
T ss_pred             hCCCCCeeEEEEEEecCC-ceEEEEecCCCcHHHHHHh
Confidence            578999999999988765 8899999999998766543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	160
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-25
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-22
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	8e-22
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-21
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-21
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	7e-21
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	9e-21
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-20
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-20
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-20
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-20
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	9e-20
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-19
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-18
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-18
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-18
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	1e-17
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	6e-17
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	7e-17
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	9e-17
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-16
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-16
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	2e-16
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	5e-16
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	8e-16
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	9e-16
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	2e-15
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-15
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	3e-15
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	6e-15
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	7e-15
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	1e-14
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	1e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-14
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-14
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	9e-14
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	1e-13
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	2e-13
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	3e-13
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-13
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	1e-12
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-12
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-12
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-12
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-12
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-12
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-11
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-11
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-11
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	3e-11
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-11
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-11
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-10
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-10
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	4e-10
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-10
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	9e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-08
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	0.002
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-05
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	0.001
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	0.003

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.9 bits (238), Expect = 5e-25
 Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 45/151 (29%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
             I++E   L E +   +V       SD  + + ME  +GG L   L   G + E  +  
Sbjct: 49  NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 108

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
               +++ L       L  ++                           +I+HRD+KP NI
Sbjct: 109 VSIAVIKGLTY-----LREKH---------------------------KIMHRDVKPSNI 136

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L++             ++K+ DFG +  L D
Sbjct: 137 LVNSRG----------EIKLCDFGVSGQLID 157

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 88.1 bits (218), Expect = 3e-22
 Identities = 38/151 (25%), Positives = 53/151 (35%), Gaps = 46/151 (30%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           + I+KE   L +L H N ++   C   +   +LVME+C G       V K  L E  I  
Sbjct: 60  QDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAA 119

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
                +Q L       LH  N                            ++HRD+K  NI
Sbjct: 120 VTHGALQGLAY-----LHSHN----------------------------MIHRDVKAGNI 146

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LLS              +K+ DFG A  +  
Sbjct: 147 LLSEPG----------LVKLGDFGSASIMAP 167

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.6 bits (214), Expect = 8e-22
 Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 47/152 (30%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIR 68
              + E   L    H N+V+LL     + ++++++EFC GG +   ++     L+E  I+
Sbjct: 54  EDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQ 113

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
           +  KQ + AL       LH                               I+HRDLK  N
Sbjct: 114 VVCKQTLDALNY-----LHDNK----------------------------IIHRDLKAGN 140

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           IL +              +K+ADFG +     
Sbjct: 141 ILFTLDG----------DIKLADFGVSAKNTR 162

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 87.1 bits (215), Expect = 1e-21
 Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 42/146 (28%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQI 74
           ++ ++ L H  +V L    E D  + ++ EF +GG+L + +  +   +SED    +++Q+
Sbjct: 74  IQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV 133

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
            + L       +H  N                             VH DLKP+NI+ +  
Sbjct: 134 CKGLCH-----MHENN----------------------------YVHLDLKPENIMFTT- 159

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                   +  +LK+ DFG    L  
Sbjct: 160 -------KRSNELKLIDFGLTAHLDP 178

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (210), Expect = 3e-21
 Identities = 40/157 (25%), Positives = 61/157 (38%), Gaps = 47/157 (29%)

Query: 13  RHILKE---LTELHHENVVELLHC--KESDQHVYLVMEFCNGGDLADYLV----SKGTLS 63
           + ++ E   L EL H N+V         ++  +Y+VME+C GGDLA  +      +  L 
Sbjct: 48  QMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLD 107

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
           E+ +   + Q+  ALK                H +    H               ++HRD
Sbjct: 108 EEFVLRVMTQLTLALKE--------------CHRRSDGGH--------------TVLHRD 139

Query: 124 LKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LKP N+ L               +K+ DFG AR L  
Sbjct: 140 LKPANVFLDGKQ----------NVKLGDFGLARILNH 166

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.9 bits (207), Expect = 7e-21
 Identities = 34/146 (23%), Positives = 49/146 (33%), Gaps = 44/146 (30%)

Query: 19  LTELHHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           L  L H N+V      ES     + + LV E    G L  YL     +    +R + +QI
Sbjct: 62  LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQI 121

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
           ++ L+      LH                               I+HRDLK  NI ++  
Sbjct: 122 LKGLQF-----LHTRTP--------------------------PIIHRDLKCDNIFITGP 150

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
            G          +KI D G A   + 
Sbjct: 151 TG---------SVKIGDLGLATLKRA 167

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (206), Expect = 9e-21
 Identities = 31/142 (21%), Positives = 51/142 (35%), Gaps = 43/142 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
            + L H N++ L         VYL++E+   G +   L       E     ++ ++  AL
Sbjct: 60  QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 119

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
                            H K                   R++HRD+KP+N+LL  +    
Sbjct: 120 SY--------------CHSK-------------------RVIHRDIKPENLLLGSAG--- 143

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
                  +LKIADFG++     
Sbjct: 144 -------ELKIADFGWSVHAPS 158

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (206), Expect = 1e-20
 Identities = 35/142 (24%), Positives = 56/142 (39%), Gaps = 43/142 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           ++ L H   V+L    + D+ +Y  + +   G+L  Y+   G+  E   R +  +IV AL
Sbjct: 62  MSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSAL 121

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           +      LH +                             I+HRDLKP+NILL+      
Sbjct: 122 E-----YLHGKG----------------------------IIHRDLKPENILLNEDM--- 145

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
                   ++I DFG A+ L  
Sbjct: 146 -------HIQITDFGTAKVLSP 160

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.5 bits (206), Expect = 1e-20
 Identities = 28/152 (18%), Positives = 48/152 (31%), Gaps = 48/152 (31%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIR 68
           +    E   L +  H N++  +    +   + +V ++C G  L  +L + +       + 
Sbjct: 49  QAFKNEVGVLRKTRHVNILLFMGY-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI 107

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
              +Q  Q +       LH ++                            I+HRDLK  N
Sbjct: 108 DIARQTAQGMDY-----LHAKS----------------------------IIHRDLKSNN 134

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           I L               +KI DFG A     
Sbjct: 135 IFLHEDL----------TVKIGDFGLATVKSR 156

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 83.6 bits (206), Expect = 2e-20
 Identities = 34/160 (21%), Positives = 62/160 (38%), Gaps = 45/160 (28%)

Query: 5   SKSSIVLTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG- 60
           +    +    +  E   + +LHH  ++ L    E    + L++EF +GG+L D + ++  
Sbjct: 63  NTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY 122

Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
            +SE  +  +++Q  + LK      +H  +                            IV
Sbjct: 123 KMSEAEVINYMRQACEGLKH-----MHEHS----------------------------IV 149

Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           H D+KP+NI+            +   +KI DFG A  L  
Sbjct: 150 HLDIKPENIMCET--------KKASSVKIIDFGLATKLNP 181

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.0 bits (202), Expect = 3e-20
 Identities = 39/158 (24%), Positives = 60/158 (37%), Gaps = 46/158 (29%)

Query: 6   KSSIVLTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           K ++    +I KE      L+HENVV+    +      YL +E+C+GG+L D +     +
Sbjct: 41  KRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGM 100

Query: 63  SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR 122
            E   + F  Q++  +       LH                               I HR
Sbjct: 101 PEPDAQRFFHQLMAGVV-----YLHGIG----------------------------ITHR 127

Query: 123 DLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           D+KP+N+LL               LKI+DFG A   + 
Sbjct: 128 DIKPENLLLDERD----------NLKISDFGLATVFRY 155

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 80.9 bits (199), Expect = 9e-20
 Identities = 40/148 (27%), Positives = 62/148 (41%), Gaps = 45/148 (30%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
             IL++++   H N+++L    E++   +LV +    G+L DYL  K TLSE   R  ++
Sbjct: 60  VDILRKVS--GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 117

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
            +++ + A              LH                      IVHRDLKP+NILL 
Sbjct: 118 ALLEVICA--------------LHKL-------------------NIVHRDLKPENILLD 144

Query: 133 HSFGKQYPQPQHIKLKIADFGFARFLQD 160
                         +K+ DFGF+  L  
Sbjct: 145 DDM----------NIKLTDFGFSCQLDP 162

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 80.8 bits (199), Expect = 1e-19
 Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 40/142 (28%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL 78
           L ++ H N+V L    ES  H+YL+M+  +GG+L D +V KG  +E      + Q++ A+
Sbjct: 61  LHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAV 120

Query: 79  KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQ 138
           K                         YL            IVHRDLKP+N+L        
Sbjct: 121 K-------------------------YLHDLG--------IVHRDLKPENLLYYS----- 142

Query: 139 YPQPQHIKLKIADFGFARFLQD 160
               +  K+ I+DFG ++    
Sbjct: 143 --LDEDSKIMISDFGLSKMEDP 162

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.8 bits (191), Expect = 2e-18
 Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 42/156 (26%)

Query: 5   SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLS 63
             +  VL +  +  L    H N++ L    ES + + ++ EF +G D+ + + +    L+
Sbjct: 41  KGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELN 100

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
           E  I  ++ Q+ +AL+      LH  N                            I H D
Sbjct: 101 EREIVSYVHQVCEALQF-----LHSHN----------------------------IGHFD 127

Query: 124 LKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
           ++P+NI+            +   +KI +FG AR L+
Sbjct: 128 IRPENIIYQT--------RRSSTIKIIEFGQARQLK 155

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 77.5 bits (190), Expect = 3e-18
 Identities = 30/148 (20%), Positives = 54/148 (36%), Gaps = 43/148 (29%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           R +L  ++      +V + +   +   +  +++  NGGDL  +L   G  SE  +R +  
Sbjct: 55  RIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAA 114

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +I+  L+      +H+                              +V+RDLKP NILL 
Sbjct: 115 EIILGLEH-----MHNRF----------------------------VVYRDLKPANILLD 141

Query: 133 HSFGKQYPQPQHIKLKIADFGFARFLQD 160
                         ++I+D G A     
Sbjct: 142 EHG----------HVRISDLGLACDFSK 159

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 8e-18
 Identities = 33/157 (21%), Positives = 55/157 (35%), Gaps = 47/157 (29%)

Query: 5   SKSSIVLTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT 61
           +         I+ E   + E  + N+V  L        +++VME+  GG L D +  +  
Sbjct: 54  NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVT-ETC 112

Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
           + E  I    ++ +QAL+      LH                               ++H
Sbjct: 113 MDEGQIAAVCRECLQALEF-----LHSNQ----------------------------VIH 139

Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           RD+K  NILL               +K+ DFGF   +
Sbjct: 140 RDIKSDNILLGMDG----------SVKLTDFGFCAQI 166

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.9 bits (186), Expect = 1e-17
 Identities = 32/154 (20%), Positives = 58/154 (37%), Gaps = 46/154 (29%)

Query: 13  RHILKELTELHHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKG--TLSEDT 66
           R +          ++V ++   E+     + + +VME  +GG+L   +  +G    +E  
Sbjct: 53  REVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTERE 112

Query: 67  IRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKP 126
               +K I +A++      LH  N                            I HRD+KP
Sbjct: 113 ASEIMKSIGEAIQY-----LHSIN----------------------------IAHRDVKP 139

Query: 127 QNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +N+L +        +  +  LK+ DFGFA+    
Sbjct: 140 ENLLYTS-------KRPNAILKLTDFGFAKETTS 166

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.1 bits (179), Expect = 6e-17
 Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 49/154 (31%)

Query: 13  RHILKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDT 66
           +  L E   +T+L H N+V+LL    E    +Y+V E+   G L DYL S+G   L  D 
Sbjct: 45  QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 104

Query: 67  IRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKP 126
           +  F   + +A+     + L   N                             VHRDL  
Sbjct: 105 LLKFSLDVCEAM-----EYLEGNN----------------------------FVHRDLAA 131

Query: 127 QNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +N+L+S               K++DFG  +    
Sbjct: 132 RNVLVSEDN----------VAKVSDFGLTKEASS 155

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.7 bits (180), Expect = 7e-17
 Identities = 31/149 (20%), Positives = 50/149 (33%), Gaps = 40/149 (26%)

Query: 16  LKELTELHHENVVELLHCKESDQ----HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
           + +   L HEN++  +     D      ++LV ++   G L DYL ++ T++ + +    
Sbjct: 48  IYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGMIKLA 106

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
                 L                          +L ME         I HRDLK +NIL+
Sbjct: 107 LSTASGLA-------------------------HLHMEIVGTQGKPAIAHRDLKSKNILV 141

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
             +              IAD G A     
Sbjct: 142 KKNG----------TCCIADLGLAVRHDS 160

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 9e-17
 Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 24/148 (16%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLK 72
            ++ +L    HEN+V LL        +YL+ E+C  GDL +YL SK    SED I    +
Sbjct: 92  KMMTQLG--SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQ 149

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           + ++  +   V  L  E+++   +       V   MEF         VHRDL  +N+L++
Sbjct: 150 KRLEEEEDLNV--LTFEDLLCFAY------QVAKGMEFLEF---KSCVHRDLAARNVLVT 198

Query: 133 HSFGKQYPQPQHIKLKIADFGFARFLQD 160
           H             +KI DFG AR +  
Sbjct: 199 HGK----------VVKICDFGLARDIMS 216

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.5 bits (177), Expect = 2e-16
 Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 29/146 (19%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           +L +L   HH N++ LL   E   ++YL +E+   G+L D+L     L  D         
Sbjct: 63  VLCKLG--HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANST 120

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
              L + Q+     +    + +  +                  + +HRDL  +NIL+   
Sbjct: 121 ASTLSSQQLLHFAADVARGMDYLSQK-----------------QFIHRDLAARNILVGE- 162

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                    +   KIADFG +R  + 
Sbjct: 163 ---------NYVAKIADFGLSRGQEV 179

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 72.1 bits (176), Expect = 2e-16
 Identities = 34/152 (22%), Positives = 52/152 (34%), Gaps = 47/152 (30%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIR 68
           R  L E   + +  H NV+ L         V ++ EF   G L  +L    G  +   + 
Sbjct: 72  RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLV 131

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
             L+ I   +K               L                        VHRDL  +N
Sbjct: 132 GMLRGIAAGMKY--------------LADM-------------------NYVHRDLAARN 158

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           IL++ +             K++DFG +RFL+D
Sbjct: 159 ILVNSNL----------VCKVSDFGLSRFLED 180

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.1 bits (176), Expect = 2e-16
 Identities = 29/139 (20%), Positives = 47/139 (33%), Gaps = 43/139 (30%)

Query: 22  LHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAF 81
             H  +  +    ++ ++++ VME+ NGGDL  ++ S           +  +I+  L+  
Sbjct: 60  WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFL 119

Query: 82  QVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ 141
             K                                  IV+RDLK  NILL          
Sbjct: 120 HSK---------------------------------GIVYRDLKLDNILLDKDG------ 140

Query: 142 PQHIKLKIADFGFARFLQD 160
                +KIADFG  +    
Sbjct: 141 ----HIKIADFGMCKENML 155

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 71.0 bits (173), Expect = 5e-16
 Identities = 30/151 (19%), Positives = 57/151 (37%), Gaps = 22/151 (14%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
               +E   + E  + N+V+LL      + + L+ E+   GDL ++L S    +  ++  
Sbjct: 61  ADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSH 120

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
                   + +     L     + +         V   M + +     + VHRDL  +N 
Sbjct: 121 SDLSTRARVSSPGPPPLSCAEQLCIARQ------VAAGMAYLSER---KFVHRDLATRNC 171

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+  +            +KIADFG +R +  
Sbjct: 172 LVGENM----------VVKIADFGLSRNIYS 192

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.1 bits (171), Expect = 8e-16
 Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 49/153 (32%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTI 67
              L E   + +L H+ +V L     + + +Y++ E+   G L D+L +     L+ + +
Sbjct: 53  DAFLAEANLMKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKL 111

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
                QI + +       +   N                             +HRDL+  
Sbjct: 112 LDMAAQIAEGMAF-----IEERN----------------------------YIHRDLRAA 138

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           NIL+S            +  KIADFG AR ++D
Sbjct: 139 NILVSD----------TLSCKIADFGLARLIED 161

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.3 bits (171), Expect = 9e-16
 Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 46/160 (28%)

Query: 4   QSKSSIVLTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG 60
           +S++   + R  L+E   L EL H N++ LL       ++ LV +F           +  
Sbjct: 36  RSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSL 95

Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
            L+   I+ ++   +Q L     + LH                               I+
Sbjct: 96  VLTPSHIKAYMLMTLQGL-----EYLHQHW----------------------------IL 122

Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           HRDLKP N+LL  +            LK+ADFG A+    
Sbjct: 123 HRDLKPNNLLLDENG----------VLKLADFGLAKSFGS 152

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 2e-15
 Identities = 32/153 (20%), Positives = 52/153 (33%), Gaps = 47/153 (30%)

Query: 11  LTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTI 67
           L   +L E   + +L +  +V ++   E++    LVME    G L  YL     + +  I
Sbjct: 51  LKDELLAEANVMQQLDNPYIVRMIGICEAE-SWMLVMEMAELGPLNKYLQQNRHVKDKNI 109

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
              + Q+   +K               L                        VHRDL  +
Sbjct: 110 IELVHQVSMGMKY--------------LEES-------------------NFVHRDLAAR 136

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           N+LL                KI+DFG ++ L+ 
Sbjct: 137 NVLLVTQH----------YAKISDFGLSKALRA 159

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.4 bits (169), Expect = 2e-15
 Identities = 34/153 (22%), Positives = 56/153 (36%), Gaps = 48/153 (31%)

Query: 12  TRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTI 67
           T  +++E   + +L +  +V L+   +  + + LVME   GG L  +LV K   +    +
Sbjct: 53  TEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNV 111

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
              L Q+   +K               L  K                     VHRDL  +
Sbjct: 112 AELLHQVSMGMKY--------------LEEK-------------------NFVHRDLAAR 138

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           N+LL +              KI+DFG ++ L  
Sbjct: 139 NVLLVNRH----------YAKISDFGLSKALGA 161

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.6 bits (167), Expect = 3e-15
 Identities = 28/152 (18%), Positives = 56/152 (36%), Gaps = 47/152 (30%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIR 68
              ++E   +  L HE +V+L       + ++++ E+   G L +YL   +       + 
Sbjct: 44  DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLL 103

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
              K + +A+              E L  K                   + +HRDL  +N
Sbjct: 104 EMCKDVCEAM--------------EYLESK-------------------QFLHRDLAARN 130

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            L++              +K++DFG +R++ D
Sbjct: 131 CLVNDQG----------VVKVSDFGLSRYVLD 152

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.2 bits (166), Expect = 6e-15
 Identities = 35/153 (22%), Positives = 56/153 (36%), Gaps = 48/153 (31%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTI 67
              LKE   + E+ H N+V+LL     +   Y++ EF   G+L DYL       +S   +
Sbjct: 58  EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVL 117

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
                QI  A     ++ L  +N                             +HRDL  +
Sbjct: 118 LYMATQISSA-----MEYLEKKN----------------------------FIHRDLAAR 144

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           N L+  +            +K+ADFG +R +  
Sbjct: 145 NCLVGENH----------LVKVADFGLSRLMTG 167

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.9 bits (165), Expect = 7e-15
 Identities = 44/161 (27%), Positives = 65/161 (40%), Gaps = 42/161 (26%)

Query: 3   TQSKSSIVLTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK 59
           T+S    V    I +E   L E+ H NV+ L    E+   V L++E   GG+L D+L  K
Sbjct: 48  TKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEK 107

Query: 60  GTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARI 119
            +L+E+    FLKQI+  +         H                             +I
Sbjct: 108 ESLTEEEATEFLKQILNGVYY------LHSL---------------------------QI 134

Query: 120 VHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            H DLKP+NI+L      +       ++KI DFG A  +  
Sbjct: 135 AHFDLKPENIMLLDRNVPKP------RIKIIDFGLAHKIDF 169

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.1 bits (163), Expect = 1e-14
 Identities = 35/165 (21%), Positives = 55/165 (33%), Gaps = 63/165 (38%)

Query: 14  HILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG------------- 60
            +L  L   +H N+V LL          ++ E+C  GDL ++L  K              
Sbjct: 78  KVLSYLG--NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 135

Query: 61  -----TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGD 115
                 L  + +  F  Q+ + +       L  +N                         
Sbjct: 136 EDDELALDLEDLLSFSYQVAKGMAF-----LASKN------------------------- 165

Query: 116 LARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
               +HRDL  +NILL+H              KI DFG AR +++
Sbjct: 166 ---CIHRDLAARNILLTHGR----------ITKICDFGLARDIKN 197

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 1e-14
 Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 43/157 (27%)

Query: 4   QSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLS 63
            +K  +  T    + L    H  +  L +  ++   +  VME+ NGG+L  +L  +   +
Sbjct: 44  IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFT 103

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
           E+  R +  +IV AL      E  H                              +V+RD
Sbjct: 104 EERARFYGAEIVSAL------EYLHSR---------------------------DVVYRD 130

Query: 124 LKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +K +N++L               +KI DFG  +    
Sbjct: 131 IKLENLMLDKDG----------HIKITDFGLCKEGIS 157

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.9 bits (160), Expect = 3e-14
 Identities = 33/149 (22%), Positives = 58/149 (38%), Gaps = 44/149 (29%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGG-DLADYLVSKGTLSEDTIRIFL 71
             +LK+++      V+ LL   E      L++E      DL D++  +G L E+  R F 
Sbjct: 58  VVLLKKVSS-GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
            Q+++A++                                       ++HRD+K +NIL+
Sbjct: 117 WQVLEAVRHCHNC---------------------------------GVLHRDIKDENILI 143

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
             + G         +LK+ DFG    L+D
Sbjct: 144 DLNRG---------ELKLIDFGSGALLKD 163

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 5e-14
 Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 47/159 (29%)

Query: 6   KSSIVLTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL 62
           +   +     ++E   + +L H  +V+L         + LV EF   G L+DYL ++  L
Sbjct: 38  REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL 97

Query: 63  -SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
            + +T+      + + +   +                                    ++H
Sbjct: 98  FAAETLLGMCLDVCEGMAYLEEA---------------------------------CVIH 124

Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDL  +N L+  +            +K++DFG  RF+ D
Sbjct: 125 RDLAARNCLVGENQ----------VIKVSDFGMTRFVLD 153

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 64.8 bits (157), Expect = 9e-14
 Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 40/128 (31%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQH----VYLVMEFCNGGDLADYLVSKGTLSED 65
               +E      L+H  +V +    E++       Y+VME+ +G  L D + ++G ++  
Sbjct: 52  LRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPK 111

Query: 66  TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLK 125
                +    QAL                                        I+HRD+K
Sbjct: 112 RAIEVIADACQALNFSHQN---------------------------------GIIHRDVK 138

Query: 126 PQNILLSH 133
           P NI++S 
Sbjct: 139 PANIMISA 146

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 1e-13
 Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 51/151 (33%)

Query: 19  LTELHHENVVELLHC------KESDQHVYLVMEFCNGG---DLADYLVSKGTLSEDTIRI 69
           + +L H N+V L +       K+ + ++ LV+++           Y  +K TL    +++
Sbjct: 67  MRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL 126

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           ++ Q+ ++L       +H                               I HRD+KPQN+
Sbjct: 127 YMYQLFRSLA-----YIHSFG----------------------------ICHRDIKPQNL 153

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LL                K+ DFG A+ L  
Sbjct: 154 LLDPDTAVL---------KLCDFGSAKQLVR 175

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 64.0 bits (155), Expect = 2e-13
 Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 46/151 (30%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
            H   E   L+ + H  ++ +    +  Q ++++M++  GG+L   L           + 
Sbjct: 49  EHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKF 108

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           +  ++  AL      E  H                              I++RDLKP+NI
Sbjct: 109 YAAEVCLAL------EYLHSK---------------------------DIIYRDLKPENI 135

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LL  +            +KI DFGFA+++ D
Sbjct: 136 LLDKNG----------HIKITDFGFAKYVPD 156

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (153), Expect = 3e-13
 Identities = 29/152 (19%), Positives = 47/152 (30%), Gaps = 48/152 (31%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIR 68
              ++E   +  L H N++ L         + +V E    G L D L    G     T+ 
Sbjct: 56  DDFIREVNAMHSLDHRNLIRLYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLS 114

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
            +  Q+ + +       L  +                              +HRDL  +N
Sbjct: 115 RYAVQVAEGM-----GYLESKR----------------------------FIHRDLAARN 141

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +LL+              +KI DFG  R L  
Sbjct: 142 LLLATRD----------LVKIGDFGLMRALPQ 163

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 4e-13
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 45/143 (31%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQA 77
           + +  H ++V+L+    ++  V+++ME C  G+L  +L  +  +L   ++ ++  Q+  A
Sbjct: 62  MRQFDHPHIVKLIGV-ITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           L                L  K                   R VHRD+  +N+L+S +   
Sbjct: 121 LAY--------------LESK-------------------RFVHRDIAARNVLVSSNDC- 146

Query: 138 QYPQPQHIKLKIADFGFARFLQD 160
                    +K+ DFG +R+++D
Sbjct: 147 ---------VKLGDFGLSRYMED 160

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 1e-12
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 51/150 (34%)

Query: 19  LTELHHENVVELLHC--------KESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIF 70
           L  L HENVV L+                +YLV +FC               +   I+  
Sbjct: 63  LQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 122

Query: 71  LKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNIL 130
           ++ ++  L                                       +I+HRD+K  N+L
Sbjct: 123 MQMLLNGLYYIHRN---------------------------------KILHRDMKAANVL 149

Query: 131 LSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           ++              LK+ADFG AR    
Sbjct: 150 ITRDG----------VLKLADFGLARAFSL 169

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 61.4 bits (148), Expect = 1e-12
 Identities = 39/159 (24%), Positives = 60/159 (37%), Gaps = 46/159 (28%)

Query: 5   SKSSIVLTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT 61
            K    +    ++E   L EL H N+V+L     + + + LV E  +        V +G 
Sbjct: 37  EKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGG 96

Query: 62  LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH 121
           L   T + FL Q++  +         H+                            R++H
Sbjct: 97  LESVTAKSFLLQLLNGIAY------CHDR---------------------------RVLH 123

Query: 122 RDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           RDLKPQN+L++             +LKIADFG AR    
Sbjct: 124 RDLKPQNLLINREG----------ELKIADFGLARAFGI 152

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.3 bits (148), Expect = 1e-12
 Identities = 34/160 (21%), Positives = 56/160 (35%), Gaps = 49/160 (30%)

Query: 6   KSSIVLTRHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-- 60
           K   +     L+E   + +L HE +V+L      +  +Y+V E+ + G L D+L  +   
Sbjct: 50  KPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFLKGETGK 108

Query: 61  TLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV 120
            L    +     QI   +                +                        V
Sbjct: 109 YLRLPQLVDMAAQIASGMAY--------------VERM-------------------NYV 135

Query: 121 HRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           HRDL+  NIL+  +             K+ADFG AR ++D
Sbjct: 136 HRDLRAANILVGENL----------VCKVADFGLARLIED 165

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 61.4 bits (148), Expect = 2e-12
 Identities = 32/149 (21%), Positives = 52/149 (34%), Gaps = 49/149 (32%)

Query: 14  HILKELTELHHENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
            IL+ L      N++ L    +    +   LV E  N  D         TL++  IR ++
Sbjct: 81  KILENLR--GGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY---QTLTDYDIRFYM 135

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
            +I++AL                 H                      I+HRD+KP N+++
Sbjct: 136 YEILKALDY--------------CHSM-------------------GIMHRDVKPHNVMI 162

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            H            KL++ D+G A F   
Sbjct: 163 DHEHR---------KLRLIDWGLAEFYHP 182

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.0 bits (147), Expect = 3e-12
 Identities = 28/151 (18%), Positives = 46/151 (30%), Gaps = 46/151 (30%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           + IL E   +  + + +V  LL    +     +      G  L      K  +    +  
Sbjct: 56  KEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLN 115

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           +  QI + +                          YL           R+VHRDL  +N+
Sbjct: 116 WCVQIAKGMN-------------------------YLEDR--------RLVHRDLAARNV 142

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+               +KI DFG A+ L  
Sbjct: 143 LVKTPQ----------HVKITDFGLAKLLGA 163

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 4e-12
 Identities = 27/146 (18%), Positives = 58/146 (39%), Gaps = 29/146 (19%)

Query: 15  ILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQI 74
           ++K +    H+N++ LL     D  +Y+++E+ + G+L +YL ++     +         
Sbjct: 71  MMKMIG--KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 128

Query: 75  VQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHS 134
            + L +  +    ++    + +                     + +HRDL  +N+L++  
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASK-----------------KCIHRDLAARNVLVTED 171

Query: 135 FGKQYPQPQHIKLKIADFGFARFLQD 160
                        KIADFG AR +  
Sbjct: 172 NVM----------KIADFGLARDIHH 187

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 58.7 bits (141), Expect = 1e-11
 Identities = 24/148 (16%), Positives = 44/148 (29%), Gaps = 42/148 (28%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
             I K +       +  +  C     +  +VME         +       S  T+ +   
Sbjct: 53  SKIYKMMQ--GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLAD 110

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           Q++  ++      +H +N                             +HRD+KP N L  
Sbjct: 111 QMISRIEY-----IHSKN----------------------------FIHRDVKPDNFL-- 135

Query: 133 HSFGKQYPQPQHIKLKIADFGFARFLQD 160
                     +   + I DFG A+  +D
Sbjct: 136 -----MGLGKKGNLVYIIDFGLAKKYRD 158

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 58.7 bits (141), Expect = 2e-11
 Identities = 22/149 (14%), Positives = 49/149 (32%), Gaps = 39/149 (26%)

Query: 13  RHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFL 71
           R   +    L     +  + +  +   H  LV++           +     S  T+ +  
Sbjct: 48  RDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAA 107

Query: 72  KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILL 131
           KQ++  +++     +H ++                            +V+RD+KP N L+
Sbjct: 108 KQMLARVQS-----IHEKS----------------------------LVYRDIKPDNFLI 134

Query: 132 SHSFGKQYPQPQHIKLKIADFGFARFLQD 160
                 +        + + DFG  +F +D
Sbjct: 135 G-----RPNSKNANMIYVVDFGMVKFYRD 158

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 58.7 bits (141), Expect = 2e-11
 Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 46/151 (30%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
            H L E   L  ++   +V+L    + + ++Y+VME+  GG++  +L   G  SE   R 
Sbjct: 86  EHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF 145

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           +  QIV   +      LH  +                            +++RDLKP+N+
Sbjct: 146 YAAQIVLTFEY-----LHSLD----------------------------LIYRDLKPENL 172

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L+               +++ DFGFA+ ++ 
Sbjct: 173 LIDQQG----------YIQVTDFGFAKRVKG 193

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.9 bits (139), Expect = 3e-11
 Identities = 43/156 (27%), Positives = 58/156 (37%), Gaps = 53/156 (33%)

Query: 13  RHILKE---LTELHHENVVELLHCKESD-----QHVYLVMEFCNGGDLADYLVSKGTLSE 64
           +  L+E   L    HEN++ +     +      + VYLV     G DL   L     LS 
Sbjct: 51  QRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLL-KTQHLSN 108

Query: 65  DTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDL 124
           D I  FL QI++ LK      +H  N                            ++HRDL
Sbjct: 109 DHICYFLYQILRGLK-----YIHSAN----------------------------VLHRDL 135

Query: 125 KPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           KP N+LL+ +            LKI DFG AR    
Sbjct: 136 KPSNLLLNTTC----------DLKICDFGLARVADP 161

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 3e-11
 Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 44/143 (30%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQA 77
           + +  H N++ L       + + ++ E+   G L  +L  K G  S   +   L+ I   
Sbjct: 63  MGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 122

Query: 78  LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGK 137
           +K                                        VHRDL  +NIL++ +   
Sbjct: 123 MKYLANM---------------------------------NYVHRDLAARNILVNSNL-- 147

Query: 138 QYPQPQHIKLKIADFGFARFLQD 160
                     K++DFG +R L+D
Sbjct: 148 --------VCKVSDFGLSRVLED 162

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 3e-11
 Identities = 28/148 (18%), Positives = 62/148 (41%), Gaps = 45/148 (30%)

Query: 13  RHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLK 72
           R +L+ +       +V L +  +++  ++L++++ NGG+L  +L  +   +E  ++I++ 
Sbjct: 79  RQVLEHIR--QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVG 136

Query: 73  QIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLS 132
           +IV AL+        H+                             I++RD+K +NILL 
Sbjct: 137 EIVLALEH------LHKL---------------------------GIIYRDIKLENILLD 163

Query: 133 HSFGKQYPQPQHIKLKIADFGFARFLQD 160
            +            + + DFG ++    
Sbjct: 164 SNG----------HVVLTDFGLSKEFVA 181

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.7 bits (136), Expect = 6e-11
 Identities = 33/153 (21%), Positives = 56/153 (36%), Gaps = 48/153 (31%)

Query: 13  RHILKE---LTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTI 67
              L E   + +  H NV+ LL  C  S+    +V+ +   GDL +++ ++    +   +
Sbjct: 73  SQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 132

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
             F  Q+ + +K    K                                 + VHRDL  +
Sbjct: 133 IGFGLQVAKGMKFLASK---------------------------------KFVHRDLAAR 159

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           N +L   F           +K+ADFG AR + D
Sbjct: 160 NCMLDEKF----------TVKVADFGLARDMYD 182

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 2e-10
 Identities = 40/151 (26%), Positives = 62/151 (41%), Gaps = 46/151 (30%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
              L+E   L EL H+N+V L     SD+ + LV EFC+      +    G L  + ++ 
Sbjct: 46  SSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKS 105

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
           FL Q+++ L        H  N                            ++HRDLKPQN+
Sbjct: 106 FLFQLLKGL-----GFCHSRN----------------------------VLHRDLKPQNL 132

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           L++ +           +LK+A+FG AR    
Sbjct: 133 LINRNG----------ELKLANFGLARAFGI 153

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 2e-10
 Identities = 35/151 (23%), Positives = 52/151 (34%), Gaps = 28/151 (18%)

Query: 11  LTRHILKELTELHHENVVELLH-CKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRI 69
           L   +   +   HH NVV LL  C +    + +++EFC  G+L+ YL SK          
Sbjct: 63  LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVA 122

Query: 70  FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNI 129
                   L    +     +    +                       + +HRDL  +NI
Sbjct: 123 PEDLYKDFLTLEHLICYSFQVAKGMEFLASR-----------------KCIHRDLAARNI 165

Query: 130 LLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           LLS              +KI DFG AR +  
Sbjct: 166 LLSEKN----------VVKICDFGLARDIYK 186

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 4e-10
 Identities = 30/152 (19%), Positives = 46/152 (30%), Gaps = 53/152 (34%)

Query: 19  LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG----------TLSEDTIR 68
           + E +  +VV LL      Q   ++ME    GDL  YL S              S   + 
Sbjct: 77  MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 136

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
               +I   +       L+                                VHRDL  +N
Sbjct: 137 QMAGEIADGMA-----YLNANK----------------------------FVHRDLAARN 163

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            +++  F           +KI DFG  R + +
Sbjct: 164 CMVAEDF----------TVKIGDFGMTRDIYE 185

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 5e-10
 Identities = 36/153 (23%), Positives = 56/153 (36%), Gaps = 49/153 (32%)

Query: 14  HILKELTELHHENVVELLHC-----KESDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTI 67
            +L+ L    H NVV L         + +  + LV E  +         V +  +  +TI
Sbjct: 59  AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETI 118

Query: 68  RIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQ 127
           +  + Q+++ L       LH                               +VHRDLKPQ
Sbjct: 119 KDMMFQLLRGLDF-----LHSHR----------------------------VVHRDLKPQ 145

Query: 128 NILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           NIL++ S           ++K+ADFG AR    
Sbjct: 146 NILVTSSG----------QIKLADFGLARIYSF 168

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.6 bits (120), Expect = 9e-09
 Identities = 37/152 (24%), Positives = 58/152 (38%), Gaps = 47/152 (30%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIR 68
              ++E   L EL+H N+V+LL    ++  +YLV EF +         S    +    I+
Sbjct: 46  STAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIK 105

Query: 69  IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQN 128
            +L Q++Q L                                       R++HRDLKPQN
Sbjct: 106 SYLFQLLQGLAFCHSH---------------------------------RVLHRDLKPQN 132

Query: 129 ILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
           +L++              +K+ADFG AR    
Sbjct: 133 LLINTEG----------AIKLADFGLARAFGV 154

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.8 bits (118), Expect = 2e-08
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 11/88 (12%)

Query: 13  RHILKE---LTELHHENVVELLHCKESDQ------HVYLVMEFCNGGDLADYLVSKGTLS 63
           +   +E   L  + HENV+ LL     D+        YLVM F   G     L+    L 
Sbjct: 62  KRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLG 119

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENV 91
           ED I+  + Q+++ L+      + H ++
Sbjct: 120 EDRIQFLVYQMLKGLRYIHAAGIIHRDL 147

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (80), Expect = 0.002
 Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 12/97 (12%)

Query: 40  VYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKE 99
           V   ++   G  +A   + +   SE   +   +++ + LK      + HENV+ LL    
Sbjct: 34  VCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYREL-RLLK-----HMRHENVIGLLDVFT 87

Query: 100 SDQ------HVYLVMEFCNGGDLARIVHRDLKPQNIL 130
            D+        YLVM F        + H  L    I 
Sbjct: 88  PDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQ 124

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 1e-05
 Identities = 37/163 (22%), Positives = 57/163 (34%), Gaps = 52/163 (31%)

Query: 4   QSKSSIVLTRHILKELTELHHENVVELLHC------KESDQHVYLVMEFCNGGDLADYLV 57
           Q+++        L  +  ++H+N++ LL+        E  Q VYLVME  +         
Sbjct: 55  QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI-- 112

Query: 58  SKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA 117
            +  L  + +   L Q++  +     K LH                              
Sbjct: 113 -QMELDHERMSYLLYQMLCGI-----KHLHSAG--------------------------- 139

Query: 118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQD 160
            I+HRDLKP NI++               LKI DFG AR    
Sbjct: 140 -IIHRDLKPSNIVVKSDC----------TLKILDFGLARTAGT 171

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.9 bits (92), Expect = 6e-05
 Identities = 36/163 (22%), Positives = 60/163 (36%), Gaps = 52/163 (31%)

Query: 5   SKSSIVLTRHILKE---LTELHHENVVELLHC-----KESDQHVYLVMEFCNGGDLADYL 56
              SI+  +   +E   L  + HENV+ LL          + +   ++    G D  + +
Sbjct: 54  PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD-LNNI 112

Query: 57  VSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL 116
           V    L++D ++  + QI++ LK      +H  +                          
Sbjct: 113 VKCQKLTDDHVQFLIYQILRGLK-----YIHSAD-------------------------- 141

Query: 117 ARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ 159
             I+HRDLKP N+             +  +LKI DFG AR   
Sbjct: 142 --IIHRDLKPSNLA----------VNEDCELKILDFGLARHTD 172

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.8 bits (81), Expect = 0.001
 Identities = 22/145 (15%), Positives = 57/145 (39%), Gaps = 20/145 (13%)

Query: 16  LKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIV 75
           +K L  ++  +  +         H+  +++  N                + + + +   V
Sbjct: 60  IKLLQRVNDADNTKEDSMGA--NHILKLLDHFN------------HKGPNGVHVVMVFEV 105

Query: 76  QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSF 135
                  + + +    + L++ K+  + + L +++ +      I+H D+KP+N+L+    
Sbjct: 106 LGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLME--- 160

Query: 136 GKQYPQPQHIKLKIADFGFARFLQD 160
                    I++KIAD G A +  +
Sbjct: 161 -IVDSPENLIQIKIADLGNACWYDE 184

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 34.4 bits (78), Expect = 0.003
 Identities = 23/155 (14%), Positives = 45/155 (29%), Gaps = 55/155 (35%)

Query: 4   QSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLS 63
            S  +I   R+  + L +L    V ++   + +     ++ME  +  +L           
Sbjct: 53  FSVLAIRSARNEFRALQKLQGLAVPKVYAWEGN----AVLMELIDAKELYRV-------R 101

Query: 64  EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD 123
            +     L  I++ +        +H                              IVH D
Sbjct: 102 VENPDEVLDMILEEVAK-----FYHRG----------------------------IVHGD 128

Query: 124 LKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL 158
           L   N+L+S              + I DF  +  +
Sbjct: 129 LSQYNVLVS-----------EEGIWIIDFPQSVEV 152

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	160
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.88
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.87
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.87
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.86
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.86
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.86
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.85
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.85
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.85
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.85
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.85
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.85
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.84
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.84
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.84
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.84
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.84
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.84
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.84
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.84
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.83
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.83
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.83
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.83
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.82
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.82
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.82
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.81
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.81
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.79
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.79
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.78
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.78
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.77
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.77
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.77
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.76
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.76
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.76
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.76
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.76
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.75
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.75
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.75
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.74
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.74
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.74
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.73
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.73
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.73
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.7
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.7
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.69
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.69
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.69
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.68
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.63
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.62
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.61
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.6
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.6
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.33
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	98.98
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	98.16
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	98.1
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	98.1
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	98.09
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	98.08
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	97.94
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	97.94
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	97.93
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	97.93
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	97.93
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	97.92
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	97.9
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	97.88
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	97.88
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	97.85
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	97.85
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	97.82
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	97.77
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	97.76
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	97.7
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	97.67
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	97.64
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	97.6
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	97.59
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	97.48
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	97.47
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	97.47
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	97.39
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	97.32
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	97.31
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	97.22
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	97.09
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	96.94
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	96.93
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	96.9
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	96.85
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	96.83
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	96.81
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	96.6
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	96.54
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	96.51
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	96.46
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	96.46
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	96.43
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	96.39
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	96.39
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	96.35
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	96.24
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	96.1
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	96.08
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	96.01
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	95.91
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	95.87
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	95.81
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	95.44
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	94.99
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	94.51
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	94.43
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	93.52
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	90.65
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	89.96
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	87.26
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	86.63
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	85.98
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	85.23

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.88  E-value=2.8e-23  Score=153.60  Aligned_cols=107  Identities=31%  Similarity=0.511  Sum_probs=96.1

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+++|+++++.++||||+++++++.+++..|+||||+++|+|..++...+.+++..+..++.+++.++.++|..    
T Consensus        47 ~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~~----  122 (271)
T d1nvra_          47 PENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI----  122 (271)
T ss_dssp             --CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc----
Confidence            4567889999999999999999999999999999999999999999887778899999999999999999998853    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++||||||+||+++.+          +.+||+|||+|+.+
T Consensus       123 -----------------------------~IiHrDiKp~NILl~~~----------~~~KL~DFG~a~~~  153 (271)
T d1nvra_         123 -----------------------------GITHRDIKPENLLLDER----------DNLKISDFGLATVF  153 (271)
T ss_dssp             -----------------------------TEECSCCCGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             -----------------------------CCccCcccHHHEEECCC----------CCEEEccchhheee
Confidence                                         68999999999999854          37999999999764

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=7.8e-23  Score=150.62  Aligned_cols=108  Identities=29%  Similarity=0.484  Sum_probs=97.4

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+.+|+++++.++||||+++++++.+++..|+||||+++|++..++...+.+++..+..++.+++.++.++|..    
T Consensus        50 ~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~~----  125 (263)
T d2j4za1          50 EHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK----  125 (263)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            4567889999999999999999999999999999999999999998887778899999999999999999998863    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                   +++|||+||+||+++.+          +.+||+|||+|+..+
T Consensus       126 -----------------------------~ivHrDiKp~Nill~~~----------~~~kl~DFG~a~~~~  157 (263)
T d2j4za1         126 -----------------------------RVIHRDIKPENLLLGSA----------GELKIADFGWSVHAP  157 (263)
T ss_dssp             -----------------------------TCCCCCCCGGGEEECTT----------SCEEECCCCSCSCCC
T ss_pred             -----------------------------CeeeeeeccccceecCC----------CCEeecccceeeecC
Confidence                                         68999999999999854          378999999997654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=4.3e-23  Score=155.90  Aligned_cols=111  Identities=27%  Similarity=0.409  Sum_probs=98.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      +.....+.+|+++|+.++||||+++++++.+++.+|+||||++||+|..++...+.+++..+..+..+++.++.++|...
T Consensus        45 ~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~~  124 (322)
T d1s9ja_          45 PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH  124 (322)
T ss_dssp             TTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            34456778999999999999999999999999999999999999999988877788999999999999999999987521


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++||||||+||+++.+          +.+||+|||+|+.+
T Consensus       125 --------------------------------~IiHRDiKP~NILl~~~----------~~vkl~DFGla~~~  155 (322)
T d1s9ja_         125 --------------------------------KIMHRDVKPSNILVNSR----------GEIKLCDFGVSGQL  155 (322)
T ss_dssp             --------------------------------CCCCSCCSGGGEEECTT----------CCEEECCCCCCHHH
T ss_pred             --------------------------------CEEccccCHHHeeECCC----------CCEEEeeCCCcccc
Confidence                                            58999999999999854          37999999999754

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=8e-23  Score=153.03  Aligned_cols=112  Identities=26%  Similarity=0.418  Sum_probs=92.5

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ++.....+.+|+++|++++||||+++++++..++.+|++|||+++|+|..++.. .+.+++.....+..+++.++.++|.
T Consensus        67 ~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~  146 (299)
T d1jpaa_          67 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLAD  146 (299)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            455667789999999999999999999999999999999999999999886654 3468888999999999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                      .                                 +++||||||+||+++.+          +.+||+|||+++.+.
T Consensus       147 ~---------------------------------~iiHrDlKp~NILl~~~----------~~~Kl~DFGla~~~~  179 (299)
T d1jpaa_         147 M---------------------------------NYVHRDLAARNILVNSN----------LVCKVSDFGLSRFLE  179 (299)
T ss_dssp             T---------------------------------TCCCSCCCGGGEEECTT----------CCEEECCC-------
T ss_pred             C---------------------------------CCccCccccceEEECCC----------CcEEECCcccceEcc
Confidence            3                                 68999999999999854          389999999998653

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.3e-22  Score=151.16  Aligned_cols=109  Identities=31%  Similarity=0.588  Sum_probs=98.3

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .....+.+|++++++++||||+++++++.+++.+|++|||++||+|..++...+.+++..+..+..+++.++.++|..  
T Consensus        50 ~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~~--  127 (288)
T d1uu3a_          50 NKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK--  127 (288)
T ss_dssp             TCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhccc--
Confidence            445678899999999999999999999999999999999999999988877778899999999999999999998763  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++||||||+||+++.+          +.+|++|||+|+.+
T Consensus       128 -------------------------------~iiHrDiKp~NIll~~~----------~~vkl~DFG~a~~~  158 (288)
T d1uu3a_         128 -------------------------------GIIHRDLKPENILLNED----------MHIQITDFGTAKVL  158 (288)
T ss_dssp             -------------------------------TEECSCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             -------------------------------cEEcCcCCccccccCCC----------ceEEecccccceec
Confidence                                           68999999999999854          37999999999865

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=3.2e-22  Score=147.82  Aligned_cols=114  Identities=29%  Similarity=0.441  Sum_probs=96.4

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeec----CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~----~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      +++....+.+|++++++++||||+++++++.+    +..+|++|||+++|+|..++...+.+++.....++.+++.++.+
T Consensus        48 ~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~y  127 (270)
T d1t4ha_          48 TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQF  127 (270)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHH
Confidence            44566778899999999999999999998764    45689999999999999988777789999999999999999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|...                               .+++||||||+||+++..         +..+||+|||+|+..
T Consensus       128 LH~~~-------------------------------~~IiHrDiKp~NILl~~~---------~~~~Kl~DFGla~~~  165 (270)
T d1t4ha_         128 LHTRT-------------------------------PPIIHRDLKCDNIFITGP---------TGSVKIGDLGLATLK  165 (270)
T ss_dssp             HHTSS-------------------------------SCCCCSCCCGGGEEESST---------TSCEEECCTTGGGGC
T ss_pred             HHHCC-------------------------------CCEEeCCcChhhceeeCC---------CCCEEEeecCcceec
Confidence            87531                               138999999999999632         237899999999754

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.7e-22  Score=150.54  Aligned_cols=110  Identities=29%  Similarity=0.505  Sum_probs=96.6

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ...+..+.+|+++++.++||||+++++++.+++.+|+||||+++|+|..++.. .+.+++.....++.+++.++.++|..
T Consensus        50 ~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~  129 (288)
T d2jfla1          50 EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN  129 (288)
T ss_dssp             SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            44566788999999999999999999999999999999999999999887654 35689999999999999999998863


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++||||||+||+++.+          +.+||+|||+|+.+
T Consensus       130 ---------------------------------~ivHrDiKp~NIll~~~----------~~~Kl~DFG~a~~~  160 (288)
T d2jfla1         130 ---------------------------------KIIHRDLKAGNILFTLD----------GDIKLADFGVSAKN  160 (288)
T ss_dssp             ---------------------------------TEECCCCSGGGEEECTT----------SCEEECCCTTCEEC
T ss_pred             ---------------------------------CEEEeecChhheeECCC----------CCEEEEechhhhcc
Confidence                                             68999999999999854          37899999998754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.85  E-value=2.8e-22  Score=149.24  Aligned_cols=109  Identities=28%  Similarity=0.462  Sum_probs=95.3

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....+.+|+++++.++||||+++++++.+++..|++|||+++|++..++...  ..+++.....++.+++.++.++|.. 
T Consensus        56 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~-  134 (287)
T d1opja_          56 EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK-  134 (287)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             hHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC-
Confidence            3456889999999999999999999999999999999999999998876533  4578888888999999999998853 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      +++||||||+|||++.+          +.+||+|||+|+...
T Consensus       135 --------------------------------~iiHrDlKp~NILl~~~----------~~~Kl~DFG~a~~~~  166 (287)
T d1opja_         135 --------------------------------NFIHRDLAARNCLVGEN----------HLVKVADFGLSRLMT  166 (287)
T ss_dssp             --------------------------------TCCCSCCSGGGEEECGG----------GCEEECCCCCTTTCC
T ss_pred             --------------------------------CcccCccccCeEEECCC----------CcEEEccccceeecC
Confidence                                            68999999999999854          489999999998654

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=5.2e-22  Score=148.24  Aligned_cols=107  Identities=28%  Similarity=0.489  Sum_probs=94.9

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++++.++||||+++++++.+++.+|+||||++||+|..++ .++.+++..+..++.+++.++.++|..   
T Consensus        60 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L~~~~-~~~~l~~~~~~~i~~qi~~aL~yLH~~---  135 (293)
T d1yhwa1          60 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSN---  135 (293)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBHHHHH-HHSCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEecCCCcHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            3456789999999999999999999999999999999999999998764 345789999999999999999998863   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++||||||+||+++.+          +.+||+|||+|+.+
T Consensus       136 ------------------------------~iiHrDiKp~NILl~~~----------~~vkl~DFG~a~~~  166 (293)
T d1yhwa1         136 ------------------------------QVIHRDIKSDNILLGMD----------GSVKLTDFGFCAQI  166 (293)
T ss_dssp             ------------------------------TEECCCCSGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             ------------------------------CCcccCCcHHHeEECCC----------CcEeeccchhheee
Confidence                                          68999999999999754          37999999999865

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=3.7e-22  Score=151.69  Aligned_cols=109  Identities=27%  Similarity=0.419  Sum_probs=98.5

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+..+.+|+++|+.++||||+++++++.+...+|+||||++||+|..++...+.+++..++.++.+++.++.++|..  
T Consensus        47 ~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH~~--  124 (337)
T d1o6la_          47 DEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR--  124 (337)
T ss_dssp             TCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhhhc--
Confidence            345677889999999999999999999999999999999999999998888788899999999999999999998863  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++||||||+||+++.+          +.+||+|||+|+.+
T Consensus       125 -------------------------------~iiHRDlKP~NILl~~~----------g~vkl~DFG~a~~~  155 (337)
T d1o6la_         125 -------------------------------DVVYRDIKLENLMLDKD----------GHIKITDFGLCKEG  155 (337)
T ss_dssp             -------------------------------TCBCCCCCGGGEEECTT----------SCEEECCCTTCBCS
T ss_pred             -------------------------------CccccccCHHHeEecCC----------CCEEEeeccccccc
Confidence                                           68999999999999854          37999999999864

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.85  E-value=3.8e-22  Score=150.03  Aligned_cols=111  Identities=29%  Similarity=0.413  Sum_probs=97.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ......+.+|++++++++||||+++++++.+++.+|++|||+.+|++..+...++.+++..+..++.+++.++.++|.. 
T Consensus        56 ~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~-  134 (309)
T d1u5ra_          56 NEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH-  134 (309)
T ss_dssp             HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC-
Confidence            4456678899999999999999999999999999999999999998876555667789999999999999999998863 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      +++||||||+||+++.+          +.+||+|||+|+...
T Consensus       135 --------------------------------~iiHrDiKp~NILl~~~----------~~~Kl~DFG~a~~~~  166 (309)
T d1u5ra_         135 --------------------------------NMIHRDVKAGNILLSEP----------GLVKLGDFGSASIMA  166 (309)
T ss_dssp             --------------------------------TCBCCCCSGGGEEEETT----------TEEEECCCTTCBSSS
T ss_pred             --------------------------------CEeccCCCcceEEECCC----------CCEEEeecccccccC
Confidence                                            68999999999999854          389999999997543

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.85  E-value=7.7e-22  Score=146.22  Aligned_cols=109  Identities=35%  Similarity=0.586  Sum_probs=98.3

Q ss_pred             HHHHHHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ...++.+|++++++++ ||||+++++++.+++.+|++|||+++|+|..++..++.+++..+..+..|++.++.++|..  
T Consensus        52 ~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~~lH~~--  129 (277)
T d1phka_          52 LREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL--  129 (277)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEeecccCcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc--
Confidence            3456888999999997 9999999999999999999999999999999988888899999999999999999998853  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                     +++|||+||+||+++.+          +.+||+|||+++.+.
T Consensus       130 -------------------------------~ivHrDlkp~Nill~~~----------~~~kl~DFG~a~~~~  161 (277)
T d1phka_         130 -------------------------------NIVHRDLKPENILLDDD----------MNIKLTDFGFSCQLD  161 (277)
T ss_dssp             -------------------------------TEECSCCSGGGEEECTT----------CCEEECCCTTCEECC
T ss_pred             -------------------------------CCcccccccceEEEcCC----------CCeEEccchheeEcc
Confidence                                           68999999999999754          378999999997653

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=8.4e-22  Score=145.96  Aligned_cols=109  Identities=26%  Similarity=0.377  Sum_probs=95.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      +.....+.+|++++++++||||+++++++.. +..++||||+++|+|..++.....+++.....++.+++.++.++|.. 
T Consensus        49 ~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~-  126 (277)
T d1xbba_          49 PALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES-  126 (277)
T ss_dssp             CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhC-
Confidence            3445678899999999999999999998865 56799999999999998887777899999999999999999998853 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++|||+||+||+++.++          .++++|||+++.+
T Consensus       127 --------------------------------~iiHrDlKp~Nill~~~~----------~~kl~DFGla~~~  157 (277)
T d1xbba_         127 --------------------------------NFVHRDLAARNVLLVTQH----------YAKISDFGLSKAL  157 (277)
T ss_dssp             --------------------------------TEECSCCSGGGEEEEETT----------EEEECCCTTCEEC
T ss_pred             --------------------------------CcccCCCcchhhcccccC----------cccccchhhhhhc
Confidence                                            589999999999998553          8999999999764

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.84  E-value=4.6e-22  Score=149.39  Aligned_cols=109  Identities=34%  Similarity=0.543  Sum_probs=90.8

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ..+.+|+++++.++||||+++++++.+++.+|++|||++||+|.+++...+.+++..+..++.+++.++.++|..     
T Consensus        52 ~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~-----  126 (307)
T d1a06a_          52 GSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL-----  126 (307)
T ss_dssp             ---CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhc-----
Confidence            456789999999999999999999999999999999999999999887778899999999999999999998853     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++|||+||+|+++...       +.++.+||+|||+|+..
T Consensus       127 ----------------------------~iiHrDiKp~Nil~~~~-------~~~~~vkl~DFG~a~~~  160 (307)
T d1a06a_         127 ----------------------------GIVHRDLKPENLLYYSL-------DEDSKIMISDFGLSKME  160 (307)
T ss_dssp             ----------------------------TCCCSCCCGGGEEESSS-------STTCCEEECCC------
T ss_pred             ----------------------------eeeeEEecccceeeccc-------CCCceEEEeccceeEEc
Confidence                                        68999999999999742       23457999999999754

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.84  E-value=1.2e-21  Score=149.74  Aligned_cols=110  Identities=29%  Similarity=0.526  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+++|+++|+.++||||+++++++.+++.+|+||||++||+|.+++..++ .+++..+..++.+++.++.++|..   
T Consensus        70 ~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~ylH~~---  146 (352)
T d1koba_          70 KYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---  146 (352)
T ss_dssp             HHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence            3467789999999999999999999999999999999999999987665544 589999999999999999998853   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                    +++||||||+|||++..        ..+.+||+|||+|+.+.
T Consensus       147 ------------------------------~iiHRDiKp~NILl~~~--------~~~~vkL~DFGla~~~~  180 (352)
T d1koba_         147 ------------------------------SIVHLDIKPENIMCETK--------KASSVKIIDFGLATKLN  180 (352)
T ss_dssp             ------------------------------TEECCCCCGGGEEESST--------TCCCEEECCCTTCEECC
T ss_pred             ------------------------------Ceeeccccccccccccc--------CCCeEEEeecccceecC
Confidence                                          68999999999999742        23478999999997653

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=8.6e-22  Score=145.87  Aligned_cols=111  Identities=23%  Similarity=0.404  Sum_probs=95.2

Q ss_pred             cchhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhh
Q psy11428          4 QSKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         4 ~~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      .+......+++|++++++++||||+++++++. .+.+++++||+++|+|..++.. .+.+++.....+..+++.++.++|
T Consensus        43 ~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH  121 (276)
T d1uwha_          43 PTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH  121 (276)
T ss_dssp             CCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHh
Confidence            35667788999999999999999999999764 4678999999999999988754 356889999999999999999988


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++||||||+||+++.+          ..+||+|||+|+..
T Consensus       122 ~~---------------------------------~ivHrDlKp~NiLl~~~----------~~~Kl~DFGla~~~  154 (276)
T d1uwha_         122 AK---------------------------------SIIHRDLKSNNIFLHED----------LTVKIGDFGLATVK  154 (276)
T ss_dssp             HT---------------------------------TCCCSCCCGGGEEEETT----------SSEEECCCCCSCC-
T ss_pred             cC---------------------------------CEeccccCHHHEEEcCC----------CCEEEccccceeec
Confidence            53                                 68999999999999854          37899999999754

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=1.7e-21  Score=145.15  Aligned_cols=113  Identities=35%  Similarity=0.525  Sum_probs=99.4

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ....+.+|+++|++++||||+++++++.+.+.+|++|||+++|+|..++...+.+++..+..++.+++.++.++|..   
T Consensus        56 ~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~yLH~~---  132 (293)
T d1jksa_          56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---  132 (293)
T ss_dssp             CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHhhhhc---
Confidence            45678899999999999999999999999999999999999999999887778899999999999999999998853   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                    +++|||+||+|++++.++      .....+|++|||+|+.+.
T Consensus       133 ------------------------------~ivHrDiKp~Nill~~~~------~~~~~vkl~DfG~a~~~~  168 (293)
T d1jksa_         133 ------------------------------QIAHFDLKPENIMLLDRN------VPKPRIKIIDFGLAHKID  168 (293)
T ss_dssp             ------------------------------TEECCCCSGGGEEESCSS------SSSCCEEECCCTTCEECT
T ss_pred             ------------------------------ceeecccccceEEEecCC------CcccceEecchhhhhhcC
Confidence                                          689999999999998643      123468999999997653

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.84  E-value=1.7e-21  Score=148.76  Aligned_cols=112  Identities=29%  Similarity=0.523  Sum_probs=97.3

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      .....+++|+++|+.++||||+++++++.+++.+|+||||++||+|.+++.. .+.+++..+..++.+++.++.++|.. 
T Consensus        65 ~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ylH~~-  143 (350)
T d1koaa2          65 SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN-  143 (350)
T ss_dssp             HHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhc-
Confidence            3456678899999999999999999999999999999999999999887743 45689999999999999999998863 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      +++||||||+||+++.+        .++.+||+|||+++.+.
T Consensus       144 --------------------------------~iiHrDiKp~NIll~~~--------~~~~vkL~DFG~a~~~~  177 (350)
T d1koaa2         144 --------------------------------NYVHLDLKPENIMFTTK--------RSNELKLIDFGLTAHLD  177 (350)
T ss_dssp             --------------------------------TEECCCCCGGGEEESST--------TSCCEEECCCTTCEECC
T ss_pred             --------------------------------CCeeeeechhHeeeccC--------CCCeEEEeecchheecc
Confidence                                            68999999999999742        23479999999998654

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.84  E-value=1.1e-21  Score=147.92  Aligned_cols=110  Identities=26%  Similarity=0.516  Sum_probs=97.3

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+..+.+|.++++.++||||+++++++.+.+.+|+||||++||++...+...+..++...+.+..+++.++.++|..  
T Consensus        46 ~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~--  123 (316)
T d1fota_          46 KQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK--  123 (316)
T ss_dssp             TCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT--
T ss_pred             HHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhccC--
Confidence            345678899999999999999999999999999999999999999988877777788888888999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                     +++||||||+||+++.+          +.+||+|||+|+.+.
T Consensus       124 -------------------------------~iiHrDiKp~NILl~~~----------g~vkL~DFG~a~~~~  155 (316)
T d1fota_         124 -------------------------------DIIYRDLKPENILLDKN----------GHIKITDFGFAKYVP  155 (316)
T ss_dssp             -------------------------------TEECCCCCGGGEEECTT----------SCEEECCCSSCEECS
T ss_pred             -------------------------------cEEccccCchheeEcCC----------CCEEEecCccceEec
Confidence                                           68999999999999854          379999999998654

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=2.1e-21  Score=144.39  Aligned_cols=110  Identities=28%  Similarity=0.477  Sum_probs=95.2

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ++.....+.+|++++++++||||+++++++.+ +.+|+||||+++|+|..++.. ++.+++.....++.+++.++.++|.
T Consensus        49 ~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~ylH~  127 (285)
T d1u59a_          49 EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEE  127 (285)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence            34566788999999999999999999998865 568999999999999887654 4568999999999999999999886


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++|||+||+||+++.++          .+||+|||+++.+
T Consensus       128 ~---------------------------------~iiHrDlKp~Nill~~~~----------~~Kl~DFGla~~~  159 (285)
T d1u59a_         128 K---------------------------------NFVHRDLAARNVLLVNRH----------YAKISDFGLSKAL  159 (285)
T ss_dssp             T---------------------------------TEECCCCSGGGEEEEETT----------EEEECCCTTCEEC
T ss_pred             C---------------------------------CeecCcCchhheeeccCC----------ceeeccchhhhcc
Confidence            3                                 689999999999998543          8999999999865

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=1.2e-21  Score=144.54  Aligned_cols=117  Identities=32%  Similarity=0.550  Sum_probs=89.2

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeec--CCcEEEEEEEeCCCceeEEEee----ecCCCHHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKES--DQHVYLVMEFCNGGDLADYLVS----KGTLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~--~~~~~lv~e~~~~g~l~~~l~~----~~~~~~~~~~~~~~~~~~~~   78 (160)
                      ++.....+.+|++++++++||||+++++++.+  ...+|++|||+++|+|.+++..    .+.+++..+..++.+++.++
T Consensus        43 ~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al  122 (269)
T d2java1          43 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL  122 (269)
T ss_dssp             CHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHH
Confidence            45566778899999999999999999998854  4678999999999999887643    35689999999999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .++|......                            .+++||||||+||+++.+          +.+||+|||+|+.+
T Consensus       123 ~ylH~~~~~~----------------------------~~IiHrDiKp~NIll~~~----------~~vkl~DFG~a~~~  164 (269)
T d2java1         123 KECHRRSDGG----------------------------HTVLHRDLKPANVFLDGK----------QNVKLGDFGLARIL  164 (269)
T ss_dssp             HHHHHHCC-------------------------------------CCGGGEEECTT----------SCEEECCHHHHHHC
T ss_pred             HHHHHhcCCC----------------------------CCEEeCcCchhhcCcCCC----------CcEEEeeccceeec
Confidence            9988531111                            148999999999999854          37999999999765


Q ss_pred             C
Q psy11428        159 Q  159 (160)
Q Consensus       159 ~  159 (160)
                      .
T Consensus       165 ~  165 (269)
T d2java1         165 N  165 (269)
T ss_dssp             -
T ss_pred             c
Confidence            3

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.83  E-value=2.8e-21  Score=148.17  Aligned_cols=108  Identities=27%  Similarity=0.425  Sum_probs=95.4

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ...+..++++++.++||||+++++++.+.+.+|+||||++||+|..++...+.+++..+..++.+++.++.++|..    
T Consensus        51 ~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~ylH~~----  126 (364)
T d1omwa3          51 ALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR----  126 (364)
T ss_dssp             HHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHhcCCCCcEEEEEEEEEECCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHC----
Confidence            4455667888888999999999999999999999999999999998887778889999999999999999998863    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                   +++||||||+|||++.+          +.+||+|||+|+.+.
T Consensus       127 -----------------------------~iiHrDlKP~NILl~~~----------g~iKl~DFGla~~~~  158 (364)
T d1omwa3         127 -----------------------------FVVYRDLKPANILLDEH----------GHVRISDLGLACDFS  158 (364)
T ss_dssp             -----------------------------TEECCCCSGGGEEECSS----------SCEEECCCTTCEECS
T ss_pred             -----------------------------CccceeeccceeEEcCC----------CcEEEeeeceeeecC
Confidence                                         68999999999999854          379999999998653

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=3.7e-21  Score=145.19  Aligned_cols=108  Identities=29%  Similarity=0.479  Sum_probs=95.3

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+++|+.++||||+++++++.+++.+|+||||++||+|.+++...+ .+++..+..++.+++.++.++|..    
T Consensus        46 ~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH~~----  121 (321)
T d1tkia_          46 VLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH----  121 (321)
T ss_dssp             HHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHc----
Confidence            356789999999999999999999999999999999999999998886654 689999999999999999998853    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++||||||+||+++.+        +...++++|||+++..
T Consensus       122 -----------------------------~iiHrDlKp~NIll~~~--------~~~~ikl~DFG~~~~~  154 (321)
T d1tkia_         122 -----------------------------NIGHFDIRPENIIYQTR--------RSSTIKIIEFGQARQL  154 (321)
T ss_dssp             -----------------------------TEECCCCCGGGEEESSS--------SCCCEEECCCTTCEEC
T ss_pred             -----------------------------CCCcccccccceeecCC--------CceEEEEcccchhhcc
Confidence                                         68999999999999743        2347899999999764

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.6e-21  Score=142.18  Aligned_cols=106  Identities=25%  Similarity=0.443  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|++++++++||||+++++++.+++..|++|||+++|+|.+++... ..+++.....+..+++.++.++|..    
T Consensus        45 ~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~----  120 (263)
T d1sm2a_          45 EDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA----  120 (263)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc----
Confidence            45778999999999999999999999999999999999999998876544 4567888888999999999998753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|||+||+||+++.+          ..+||+|||+++..
T Consensus       121 -----------------------------~iiHrDlKp~Nill~~~----------~~~Kl~DFGla~~~  151 (263)
T d1sm2a_         121 -----------------------------CVIHRDLAARNCLVGEN----------QVIKVSDFGMTRFV  151 (263)
T ss_dssp             -----------------------------TCCCTTCSGGGEEECGG----------GCEEECSCC-----
T ss_pred             -----------------------------ceeecccchhheeecCC----------CCeEecccchheec
Confidence                                         68999999999999854          38999999999764

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.82  E-value=4.3e-21  Score=146.42  Aligned_cols=110  Identities=28%  Similarity=0.490  Sum_probs=98.7

Q ss_pred             hHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          7 SSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ..+..+.+|+++|+.++||||+++++++.+...+++++|++.+|++..++...+.+++..+..++.+++.++.++|..  
T Consensus        83 ~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~~--  160 (350)
T d1rdqe_          83 KQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--  160 (350)
T ss_dssp             TCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHHcCCCcEeecccccccccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            345677899999999999999999999999999999999999999988887778899999999999999999998853  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                     +++||||||+||+++.+          +.+||+|||+|+.+.
T Consensus       161 -------------------------------~iiHRDIKP~NILl~~~----------g~ikL~DFG~a~~~~  192 (350)
T d1rdqe_         161 -------------------------------DLIYRDLKPENLLIDQQ----------GYIQVTDFGFAKRVK  192 (350)
T ss_dssp             -------------------------------TEECCCCSGGGEEECTT----------SCEEECCCTTCEECS
T ss_pred             -------------------------------CEecCcCCHHHcccCCC----------CCEEeeeceeeeecc
Confidence                                           68999999999999754          379999999998654

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=3.9e-21  Score=145.24  Aligned_cols=108  Identities=37%  Similarity=0.590  Sum_probs=91.7

Q ss_pred             HHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-----------------------cCCC
Q psy11428          8 SIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-----------------------GTLS   63 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-----------------------~~~~   63 (160)
                      ....+.+|+++++++ +|||||++++++.+.+.+|++|||+++|+|.+++..+                       +.++
T Consensus        83 ~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  162 (325)
T d1rjba_          83 EREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT  162 (325)
T ss_dssp             -CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CC
T ss_pred             HHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCC
Confidence            345677899999998 8999999999999999999999999999998876432                       2467


Q ss_pred             HHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCC
Q psy11428         64 EDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQ  143 (160)
Q Consensus        64 ~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~  143 (160)
                      +.....++.+++.++.++|..                                 +++||||||+||+++.+         
T Consensus       163 ~~~~~~i~~qi~~gl~yLH~~---------------------------------~IiHRDlKp~Nill~~~---------  200 (325)
T d1rjba_         163 FEDLLCFAYQVAKGMEFLEFK---------------------------------SCVHRDLAARNVLVTHG---------  200 (325)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHT---------------------------------TEEETTCSGGGEEEETT---------
T ss_pred             HHHHHHHHHHHHHHHHHHHhC---------------------------------CeeeccCchhccccccC---------
Confidence            788888999999999998863                                 68999999999999854         


Q ss_pred             CceEEEeeeeccccc
Q psy11428        144 HIKLKIADFGFARFL  158 (160)
Q Consensus       144 ~~~~~l~dfg~a~~~  158 (160)
                       +.+||+|||+|+..
T Consensus       201 -~~~Kl~DFGla~~~  214 (325)
T d1rjba_         201 -KVVKICDFGLARDI  214 (325)
T ss_dssp             -TEEEECCCGGGSCG
T ss_pred             -CeEEEeeccccccc
Confidence             38999999999754

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=7.8e-21  Score=141.00  Aligned_cols=111  Identities=25%  Similarity=0.397  Sum_probs=92.9

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ++.....+.+|++++++++||||+++++++.+....++++|++.++.+...+... +.+++.....+..+++.++.++|.
T Consensus        49 ~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~lH~  128 (283)
T d1mqba_          49 TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLAN  128 (283)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhhccc
Confidence            4455667889999999999999999999999999999999999999887765433 567888888999999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++||||||+|||++.+          ..+||+|||+++.+
T Consensus       129 ~---------------------------------~iiHrDlKp~NILl~~~----------~~~Kl~DFGla~~~  160 (283)
T d1mqba_         129 M---------------------------------NYVHRDLAARNILVNSN----------LVCKVSDFGLSRVL  160 (283)
T ss_dssp             T---------------------------------TCCCSCCCGGGEEECTT----------CCEEECCCCC----
T ss_pred             c---------------------------------ccccCccccceEEECCC----------CeEEEcccchhhcc
Confidence            3                                 68999999999999854          38999999999865

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=9.1e-21  Score=139.94  Aligned_cols=107  Identities=27%  Similarity=0.486  Sum_probs=90.6

Q ss_pred             HHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          9 IVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ...+.+|++++++++||||+++++++. .+..|++|||+++|++.+++...  ..+++.....++.+++.++.++|..  
T Consensus        52 ~~~~~~E~~~l~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~--  128 (272)
T d1qpca_          52 PDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER--  128 (272)
T ss_dssp             HHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHhCCCCCEeEEEeeec-cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            456889999999999999999999775 46679999999999998765433  2478888889999999999998753  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                     +++||||||+||+++.+          ..+||+|||+|+.+.
T Consensus       129 -------------------------------~ivHrDiKp~NIll~~~----------~~~Kl~DFGla~~~~  160 (272)
T d1qpca_         129 -------------------------------NYIHRDLRAANILVSDT----------LSCKIADFGLARLIE  160 (272)
T ss_dssp             -------------------------------TEECSCCSGGGEEECTT----------SCEEECCCTTCEECS
T ss_pred             -------------------------------CcccCccchhheeeecc----------cceeeccccceEEcc
Confidence                                           68999999999999854          479999999998654

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=9e-21  Score=141.46  Aligned_cols=105  Identities=30%  Similarity=0.439  Sum_probs=92.6

Q ss_pred             HHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         11 LTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      .+.+|+.+++.++||||+++++++..++.+|+||||+.++++.......+.+++..+..+..|++.++.++|..      
T Consensus        46 ~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~------  119 (299)
T d1ua2a_          46 TALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH------  119 (299)
T ss_dssp             HHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT------
T ss_pred             HHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcc------
Confidence            56789999999999999999999999999999999999988776555566788899999999999999998863      


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                 +++||||||+||+++.+          +.+||+|||+|+..
T Consensus       120 ---------------------------~iiHrDiKp~NIli~~~----------~~~KL~DFG~a~~~  150 (299)
T d1ua2a_         120 ---------------------------WILHRDLKPNNLLLDEN----------GVLKLADFGLAKSF  150 (299)
T ss_dssp             ---------------------------TCCCCCCCGGGEEECTT----------CCEEECCCGGGSTT
T ss_pred             ---------------------------ceecccCCcceEEecCC----------CccccccCcccccc
Confidence                                       68999999999999854          37899999999754

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=4.5e-20  Score=136.10  Aligned_cols=111  Identities=28%  Similarity=0.509  Sum_probs=88.3

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ++.....+.+|++++++++||||+++++++. .+..|++|||+++|++..++.. .+.+++.....+..+++.++.++|.
T Consensus        48 ~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~  126 (273)
T d1mp8a_          48 SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLES  126 (273)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhhcc
Confidence            4455677899999999999999999999885 5678999999999998776543 3467888999999999999999886


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                      .                                 +++||||||+||+++.++          .+|++|||+|+.+.
T Consensus       127 ~---------------------------------~iiHrDlKp~NIll~~~~----------~~Kl~DfG~a~~~~  159 (273)
T d1mp8a_         127 K---------------------------------RFVHRDIAARNVLVSSND----------CVKLGDFGLSRYME  159 (273)
T ss_dssp             T---------------------------------TCCCSCCSGGGEEEEETT----------EEEECC--------
T ss_pred             c---------------------------------CeeccccchhheeecCCC----------cEEEccchhheecc
Confidence            3                                 689999999999998653          89999999998653

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=8.4e-20  Score=137.67  Aligned_cols=108  Identities=29%  Similarity=0.420  Sum_probs=94.1

Q ss_pred             HHHHHHHHHHHHh-hcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELT-ELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~-~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      .+..+..|..++. .++||||+++++++.+++.+|+||||+++|+|..++...+.+++..+..++.+++.++.++|..  
T Consensus        45 ~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH~~--  122 (320)
T d1xjda_          45 DVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK--  122 (320)
T ss_dssp             CHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC--
Confidence            3445566666654 6899999999999999999999999999999999988888899999999999999999998863  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++|||+||+|++++.+          +.+|++|||+++.+
T Consensus       123 -------------------------------~iiHrDikp~NiL~~~~----------~~~kl~DFG~a~~~  153 (320)
T d1xjda_         123 -------------------------------GIVYRDLKLDNILLDKD----------GHIKIADFGMCKEN  153 (320)
T ss_dssp             -------------------------------TCBCCCCCGGGEEECTT----------SCEEECCCTTCBCC
T ss_pred             -------------------------------CeeeccCcccceeecCC----------Cceeccccchhhhc
Confidence                                           68999999999999854          37899999999754

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=4.9e-20  Score=139.75  Aligned_cols=108  Identities=27%  Similarity=0.454  Sum_probs=90.6

Q ss_pred             HHHHHHHHHhh-cCCcceEEEeeeeec----CCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhhh
Q psy11428         11 LTRHILKELTE-LHHENVVELLHCKES----DQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus        11 ~~~~~~~~l~~-l~h~~iv~l~~~~~~----~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ..++|++++.+ .+||||+++++++.+    +..+|++|||++||+|.+++..++  .+++..+..++.+++.++.++|.
T Consensus        50 ~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~  129 (335)
T d2ozaa1          50 KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS  129 (335)
T ss_dssp             HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHH
Confidence            46678888655 489999999998865    467899999999999999886543  58999999999999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++||||||+||+++.+.       ....+|++|||+|+..
T Consensus       130 ~---------------------------------~iiHRDiKp~NIll~~~~-------~~~~~Kl~DFG~a~~~  164 (335)
T d2ozaa1         130 I---------------------------------NIAHRDVKPENLLYTSKR-------PNAILKLTDFGFAKET  164 (335)
T ss_dssp             T---------------------------------TEECCCCSGGGEEESCSS-------TTCCEEECCCTTCEEC
T ss_pred             c---------------------------------CCcccccccccccccccc-------ccccccccccceeeec
Confidence            3                                 689999999999998542       3457899999999754

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.78  E-value=1.1e-19  Score=133.26  Aligned_cols=107  Identities=23%  Similarity=0.447  Sum_probs=93.3

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.+|+.++++++||||+++++++.+++.+++++||+++|++..++.. ...+++.....++.++++++.++|..    
T Consensus        44 ~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~----  119 (258)
T d1k2pa_          44 DEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK----  119 (258)
T ss_dssp             HHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc----
Confidence            4678899999999999999999999999999999999999998877543 45678888889999999999998753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                   +++|||+||+|++++.+          ..+||+|||+++.+.
T Consensus       120 -----------------------------~iiH~dlk~~Nill~~~----------~~~kl~DfG~a~~~~  151 (258)
T d1k2pa_         120 -----------------------------QFLHRDLAARNCLVNDQ----------GVVKVSDFGLSRYVL  151 (258)
T ss_dssp             -----------------------------TBCCSCCSGGGEEECTT----------CCEEECCCSSCCBCS
T ss_pred             -----------------------------CcccccccceeEEEcCC----------CcEEECcchhheecc
Confidence                                         68999999999999854          378999999997653

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.77  E-value=1.4e-19  Score=133.63  Aligned_cols=111  Identities=29%  Similarity=0.471  Sum_probs=95.6

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCC----cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQ----HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~----~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      +......+.+|+++++.++||||+++++++...+    ..|+||||++|+++..++...+.+++..+..++.+++.++.+
T Consensus        47 ~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~  126 (277)
T d1o6ya_          47 DPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF  126 (277)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHH
Confidence            3455667899999999999999999999887654    389999999999998887777889999999999999999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..                                 +++||||||+||+++.++          ..+++|||.++.+
T Consensus       127 lH~~---------------------------------~iiHrDiKP~NIll~~~~----------~~~l~d~~~~~~~  161 (277)
T d1o6ya_         127 SHQN---------------------------------GIIHRDVKPANIMISATN----------AVKVMDFGIARAI  161 (277)
T ss_dssp             HHHT---------------------------------TEECCCCSGGGEEEETTS----------CEEECCCTTCEEC
T ss_pred             HHhC---------------------------------CccCccccCcccccCccc----------cceeehhhhhhhh
Confidence            8853                                 689999999999998543          6899999987643

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.1e-19  Score=136.15  Aligned_cols=109  Identities=32%  Similarity=0.500  Sum_probs=93.1

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----------------cCCCHHHHHH
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----------------GTLSEDTIRI   69 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----------------~~~~~~~~~~   69 (160)
                      .....+.+|+++|+++ +||||+++++++.+++..|+|+||+++|++.+++...                ..+++.....
T Consensus        52 ~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  131 (309)
T d1fvra_          52 DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH  131 (309)
T ss_dssp             ---CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHH
Confidence            3455688999999998 7999999999999999999999999999999887432                4578888999


Q ss_pred             HHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEE
Q psy11428         70 FLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKI  149 (160)
Q Consensus        70 ~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l  149 (160)
                      +..+++.++.++|..                                 +++|||+||+||+++.+          ..+||
T Consensus       132 ~~~qia~gl~~lH~~---------------------------------~iiHrDlkp~NIL~~~~----------~~~kl  168 (309)
T d1fvra_         132 FAADVARGMDYLSQK---------------------------------QFIHRDLAARNILVGEN----------YVAKI  168 (309)
T ss_dssp             HHHHHHHHHHHHHHT---------------------------------TEECSCCSGGGEEECGG----------GCEEE
T ss_pred             HHHHHHHHHHhhhcC---------------------------------CccccccccceEEEcCC----------CceEE
Confidence            999999999998753                                 68999999999999854          47899


Q ss_pred             eeeeccccc
Q psy11428        150 ADFGFARFL  158 (160)
Q Consensus       150 ~dfg~a~~~  158 (160)
                      +|||+++..
T Consensus       169 ~DfG~a~~~  177 (309)
T d1fvra_         169 ADFGLSRGQ  177 (309)
T ss_dssp             CCTTCEESS
T ss_pred             ccccccccc
Confidence            999998754

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.5e-19  Score=132.21  Aligned_cols=109  Identities=27%  Similarity=0.402  Sum_probs=93.6

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEee-ecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVS-KGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      +.....+.+|++++++++||||+++++++.+ ...++++||+++|++..++.. .+.+++.....+..+++.++.++|..
T Consensus        52 ~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~  130 (273)
T d1u46a_          52 PEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK  130 (273)
T ss_dssp             CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHHHhhhC
Confidence            4456678999999999999999999999965 467899999999998876544 35688999999999999999998853


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++||||||+||+++.++          .+||+|||+++.+
T Consensus       131 ---------------------------------~iiHrDikp~NIll~~~~----------~vkl~DfGl~~~~  161 (273)
T d1u46a_         131 ---------------------------------RFIHRDLAARNLLLATRD----------LVKIGDFGLMRAL  161 (273)
T ss_dssp             ---------------------------------TEECSCCCGGGEEEEETT----------EEEECCCTTCEEC
T ss_pred             ---------------------------------CEeeeeecHHHhcccccc----------ceeeccchhhhhc
Confidence                                             689999999999998643          8999999999865

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=8.5e-20  Score=136.15  Aligned_cols=108  Identities=32%  Similarity=0.473  Sum_probs=91.0

Q ss_pred             HHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEe-eecCCCHHHHHHHHHHHHHHHHHhhhhhc
Q psy11428          8 SIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLV-SKGTLSEDTIRIFLKQIVQALKAFQVKEL   86 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   86 (160)
                      ....+.+|++++++++||||+++++++.+++.+|+++|++.++.+..... ..+.+++..+..+..+++.++.++|..  
T Consensus        44 ~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~--  121 (298)
T d1gz8a_          44 VPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH--  121 (298)
T ss_dssp             CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT--
T ss_pred             HHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcC--
Confidence            35677889999999999999999999999999999999997764433222 235689999999999999999998853  


Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                     +++||||||+||+++.+          ..+|++|||+|+..
T Consensus       122 -------------------------------~IiHrDiKpeNIl~~~~----------~~~kl~DFG~a~~~  152 (298)
T d1gz8a_         122 -------------------------------RVLHRDLKPQNLLINTE----------GAIKLADFGLARAF  152 (298)
T ss_dssp             -------------------------------TCCCSCCCGGGEEECTT----------SCEEECSTTHHHHH
T ss_pred             -------------------------------CEEccccCchheeeccc----------CcceeccCCcceec
Confidence                                           68999999999999744          37899999998654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.76  E-value=2e-19  Score=134.28  Aligned_cols=110  Identities=26%  Similarity=0.401  Sum_probs=93.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee------------------------cC
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK------------------------GT   61 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~------------------------~~   61 (160)
                      +.....+.+|+++++.++||||+++++++.+....++++|++++|++.+++...                        ..
T Consensus        57 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (301)
T d1lufa_          57 ADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPP  136 (301)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CC
T ss_pred             hHHHHHHHHHHHHHHhcCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCC
Confidence            445667899999999999999999999999999999999999999988765321                        23


Q ss_pred             CCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCC
Q psy11428         62 LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQ  141 (160)
Q Consensus        62 ~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~  141 (160)
                      ++......+..+++.++.++|..                                 +++||||||+||+++.+       
T Consensus       137 l~~~~~~~i~~qi~~gl~ylH~~---------------------------------~ivHrDlKp~NILld~~-------  176 (301)
T d1lufa_         137 LSCAEQLCIARQVAAGMAYLSER---------------------------------KFVHRDLATRNCLVGEN-------  176 (301)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHT---------------------------------TCCCSCCSGGGEEECGG-------
T ss_pred             CCHHHHHHHHHHHHHHhhhcccC---------------------------------CeEeeEEcccceEECCC-------
Confidence            56777888999999999998753                                 68999999999999854       


Q ss_pred             CCCceEEEeeeeccccc
Q psy11428        142 PQHIKLKIADFGFARFL  158 (160)
Q Consensus       142 ~~~~~~~l~dfg~a~~~  158 (160)
                         ..+||+|||+|+.+
T Consensus       177 ---~~~Kl~DFGls~~~  190 (301)
T d1lufa_         177 ---MVVKIADFGLSRNI  190 (301)
T ss_dssp             ---GCEEECCCSCHHHH
T ss_pred             ---CcEEEccchhheec
Confidence               47999999998754

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.5e-19  Score=134.22  Aligned_cols=105  Identities=29%  Similarity=0.475  Sum_probs=89.2

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee--cCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK--GTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ..+.+|+.+++.++||||+++++++. .+..+++|||+++|++..++...  +.+++.....++.+++.++.++|..   
T Consensus        57 ~~~~~E~~~l~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~---  132 (285)
T d1fmka3          57 EAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---  132 (285)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHhcccCCEeEEEEEEe-cCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhh---
Confidence            46788999999999999999999885 46689999999999987765532  4578899999999999999998853   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+||+++.+          +.+||+|||+|+.+
T Consensus       133 ------------------------------~ivH~DlKp~NIll~~~----------~~~kl~DfGla~~~  163 (285)
T d1fmka3         133 ------------------------------NYVHRDLRAANILVGEN----------LVCKVADFGLARLI  163 (285)
T ss_dssp             ------------------------------TCCCSCCSGGGEEECGG----------GCEEECCCCTTC--
T ss_pred             ------------------------------heecccccceEEEECCC----------CcEEEcccchhhhc
Confidence                                          68999999999999854          48999999999754

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=5.9e-19  Score=132.47  Aligned_cols=112  Identities=25%  Similarity=0.376  Sum_probs=93.1

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeee-cCCcEEEEEEEeCCCceeEEEeeec-CCCHHHHHHHHHHHHHHHHHhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKE-SDQHVYLVMEFCNGGDLADYLVSKG-TLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~-~~~~~~lv~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      +......+.+|++++++++||||+++++++. .++..++|+||+++|++.+++.... ..+......+..+++.++.++|
T Consensus        68 ~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH  147 (311)
T d1r0pa_          68 DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA  147 (311)
T ss_dssp             CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhc
Confidence            4556778999999999999999999999765 4568999999999999988765433 4566777788999999999877


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                      ..                                 +++|||+||+||+++.+          ..+||+|||+++.+.
T Consensus       148 ~~---------------------------------~iiHrDLK~~NILl~~~----------~~~kL~DFG~~~~~~  181 (311)
T d1r0pa_         148 SK---------------------------------KFVHRDLAARNCMLDEK----------FTVKVADFGLARDMY  181 (311)
T ss_dssp             HT---------------------------------TCCCSCCSGGGEEECTT----------CCEEECSSGGGCCTT
T ss_pred             cc---------------------------------CcccCCccHHhEeECCC----------CCEEEecccchhhcc
Confidence            53                                 68999999999999854          379999999998653

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.76  E-value=1.5e-19  Score=133.95  Aligned_cols=110  Identities=34%  Similarity=0.472  Sum_probs=96.1

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      +.....+.+|+.++++++||||+++++++..++..+++++++.++.+.......+.+++..+..++.+++.++.++|.. 
T Consensus        41 ~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~-  119 (286)
T d1ob3a_          41 EGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-  119 (286)
T ss_dssp             GCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             hHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC-
Confidence            3446778899999999999999999999999999999999998887766666667889999999999999999998853 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                      +++||||||+||+++.+          +.+|++|||++...
T Consensus       120 --------------------------------~IvHrDiKp~NIll~~~----------~~~kl~DfG~a~~~  150 (286)
T d1ob3a_         120 --------------------------------RVLHRDLKPQNLLINRE----------GELKIADFGLARAF  150 (286)
T ss_dssp             --------------------------------TCCCSCCCGGGEEECTT----------SCEEECCTTHHHHH
T ss_pred             --------------------------------cEEecCCCCceeeEcCC----------CCEEecccccceec
Confidence                                            68999999999999854          37899999998643

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4.5e-19  Score=130.72  Aligned_cols=105  Identities=29%  Similarity=0.457  Sum_probs=90.0

Q ss_pred             HHHHHHHHhhcC--CcceEEEeeeeecCCcEEEEEEEeCC-CceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         12 TRHILKELTELH--HENVVELLHCKESDQHVYLVMEFCNG-GDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        12 ~~~~~~~l~~l~--h~~iv~l~~~~~~~~~~~lv~e~~~~-g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      +.+|+.++++++  ||||+++++++.+++..|+++|++.+ +++..++...+.+++..+..++.+++.++.++|..    
T Consensus        54 ~~~E~~il~~l~~~h~nIv~~~~~~~~~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~al~~lH~~----  129 (273)
T d1xwsa_          54 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC----  129 (273)
T ss_dssp             EEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT----
T ss_pred             HHHHHHHHHHhccCCCCccEEEEEEeeCCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC----
Confidence            457888998886  89999999999999999999999976 45666666667899999999999999999998863    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                   +++|||+||+||+++.+         +..+|++|||+|+..
T Consensus       130 -----------------------------~iiHrDiKp~NIll~~~---------~~~vkl~DFG~a~~~  161 (273)
T d1xwsa_         130 -----------------------------GVLHRDIKDENILIDLN---------RGELKLIDFGSGALL  161 (273)
T ss_dssp             -----------------------------TEECSCCSGGGEEEETT---------TTEEEECCCTTCEEC
T ss_pred             -----------------------------CCccccCcccceEEecC---------CCeEEECccccceec
Confidence                                         68999999999999843         237899999999754

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.7e-19  Score=132.75  Aligned_cols=109  Identities=24%  Similarity=0.364  Sum_probs=91.8

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      ......+.+|++++++++||||+++++++.+ +..+++++++.++++...+..+ ..+++.....++.+++.++.++|..
T Consensus        52 ~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~-~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~yLH~~  130 (317)
T d1xkka_          52 PKANKEILDEAYVMASVDNPHVCRLLGICLT-STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR  130 (317)
T ss_dssp             -CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHc
Confidence            3445678899999999999999999999876 4678888999999987765543 4678888889999999999998863


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++|||+||+||+++.++          .+||+|||+|+.+
T Consensus       131 ---------------------------------~iiHrDlKp~NIll~~~~----------~~kl~DFGla~~~  161 (317)
T d1xkka_         131 ---------------------------------RLVHRDLAARNVLVKTPQ----------HVKITDFGLAKLL  161 (317)
T ss_dssp             ---------------------------------TCCCSCCCGGGEEEEETT----------EEEECCCSHHHHT
T ss_pred             ---------------------------------CcccCcchhhcceeCCCC----------CeEeeccccceec
Confidence                                             689999999999998653          8999999999765

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=8.5e-19  Score=131.45  Aligned_cols=111  Identities=32%  Similarity=0.458  Sum_probs=94.2

Q ss_pred             hhHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee------------------cCCCHHH
Q psy11428          6 KSSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK------------------GTLSEDT   66 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~------------------~~~~~~~   66 (160)
                      ......+.+|+++++.+ +||||+++++++.++...+++|||+++|++..++...                  ..+++..
T Consensus        67 ~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~  146 (311)
T d1t46a_          67 LTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED  146 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHH
T ss_pred             HHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHH
Confidence            34455688899999999 6999999999999999999999999999987775432                  2467888


Q ss_pred             HHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCce
Q psy11428         67 IRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK  146 (160)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~  146 (160)
                      ...+..+++.++.++|..                                 +++||||||+||+++.+          ..
T Consensus       147 ~~~~~~qi~~gl~~LH~~---------------------------------~ivHrDLKp~NIl~~~~----------~~  183 (311)
T d1t46a_         147 LLSFSYQVAKGMAFLASK---------------------------------NCIHRDLAARNILLTHG----------RI  183 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHT---------------------------------TCCCSCCSGGGEEEETT----------TE
T ss_pred             HHHHHHHHHHHHHHHHhC---------------------------------Ceeeccccccccccccc----------Cc
Confidence            899999999999998863                                 68999999999999854          38


Q ss_pred             EEEeeeecccccC
Q psy11428        147 LKIADFGFARFLQ  159 (160)
Q Consensus       147 ~~l~dfg~a~~~~  159 (160)
                      ++++|||+++...
T Consensus       184 ~ki~DfG~~~~~~  196 (311)
T d1t46a_         184 TKICDFGLARDIK  196 (311)
T ss_dssp             EEECCCGGGSCTT
T ss_pred             ccccccchheecc
Confidence            8999999998653

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.1e-18  Score=130.72  Aligned_cols=110  Identities=25%  Similarity=0.391  Sum_probs=92.6

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----------cCCCHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----------GTLSEDTIRIFLKQIV   75 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----------~~~~~~~~~~~~~~~~   75 (160)
                      ......+.+|+.++++++||||+++++.+..+...++++|++++|++..++...          ...+......+..+++
T Consensus        64 ~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia  143 (308)
T d1p4oa_          64 MRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIA  143 (308)
T ss_dssp             HHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHH
Confidence            345566889999999999999999999999999999999999999998876532          1245667777889999


Q ss_pred             HHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecc
Q psy11428         76 QALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFA  155 (160)
Q Consensus        76 ~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a  155 (160)
                      .++.++|..                                 +++|||+||+|||++.+          ..+||+|||+|
T Consensus       144 ~gl~~LH~~---------------------------------~ivHrDlk~~NiLld~~----------~~~Kl~DFGla  180 (308)
T d1p4oa_         144 DGMAYLNAN---------------------------------KFVHRDLAARNCMVAED----------FTVKIGDFGMT  180 (308)
T ss_dssp             HHHHHHHHT---------------------------------TCBCSCCSGGGEEECTT----------CCEEECCTTCC
T ss_pred             HHHHHHhhC---------------------------------CeeeceEcCCceeecCC----------ceEEEeecccc
Confidence            999988753                                 58999999999999854          48999999999


Q ss_pred             ccc
Q psy11428        156 RFL  158 (160)
Q Consensus       156 ~~~  158 (160)
                      +.+
T Consensus       181 ~~~  183 (308)
T d1p4oa_         181 RDI  183 (308)
T ss_dssp             CGG
T ss_pred             eec
Confidence            755

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.9e-19  Score=131.25  Aligned_cols=110  Identities=30%  Similarity=0.481  Sum_probs=88.4

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeee-cCCcEEEEEEEeCCCceeEEEeeec--CCCHHHHHHHHHHHHHHHHHhh
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKE-SDQHVYLVMEFCNGGDLADYLVSKG--TLSEDTIRIFLKQIVQALKAFQ   82 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~-~~~~~~lv~e~~~~g~l~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~   82 (160)
                      ++....+++|++++++++||||+++++++. .++.+|+|+||+++|++.+++..++  .+++.....+..+++.++.++|
T Consensus        41 ~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH  120 (262)
T d1byga_          41 DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE  120 (262)
T ss_dssp             CC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc
Confidence            344567889999999999999999999875 4567899999999999998875443  4788889999999999999987


Q ss_pred             hhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         83 VKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      ..                                 +++|||+||+||+++.+          +.++++|||+++..
T Consensus       121 ~~---------------------------------~ivH~dlkp~Nil~~~~----------~~~kl~dfg~s~~~  153 (262)
T d1byga_         121 GN---------------------------------NFVHRDLAARNVLVSED----------NVAKVSDFGLTKEA  153 (262)
T ss_dssp             HT---------------------------------TCCCSCCSGGGEEECTT----------SCEEECCCCC----
T ss_pred             cC---------------------------------ceeccccchHhheecCC----------CCEeecccccceec
Confidence            53                                 68999999999999854          47899999999754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1e-18  Score=130.35  Aligned_cols=112  Identities=26%  Similarity=0.503  Sum_probs=95.7

Q ss_pred             cchhHHHHHHHHHHHHhhc-CCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee----------------cCCCHHH
Q psy11428          4 QSKSSIVLTRHILKELTEL-HHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK----------------GTLSEDT   66 (160)
Q Consensus         4 ~~~~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~----------------~~~~~~~   66 (160)
                      .++.....+..|...+.++ +||||+++++++.+++.++++|||+.+|++..++..+                ..+++..
T Consensus        57 ~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~  136 (299)
T d1fgka_          57 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD  136 (299)
T ss_dssp             CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHH
T ss_pred             cChHHHHHHHHHHHHHHHhcCCCeEEecccccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHH
Confidence            3445667788888888888 8999999999999999999999999999998877533                3478889


Q ss_pred             HHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCce
Q psy11428         67 IRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIK  146 (160)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~  146 (160)
                      ...++.+++.++.++|..                                 +++||||||+||+++.+          +.
T Consensus       137 ~~~~~~qi~~al~ylH~~---------------------------------~ivHrDiKp~NiLl~~~----------~~  173 (299)
T d1fgka_         137 LVSCAYQVARGMEYLASK---------------------------------KCIHRDLAARNVLVTED----------NV  173 (299)
T ss_dssp             HHHHHHHHHHHHHHHHHT---------------------------------TCCCSCCSGGGEEECTT----------CC
T ss_pred             HHHHHHHHHHHHHHhhhC---------------------------------CEEeeeecccceeecCC----------CC
Confidence            999999999999998864                                 68999999999999854          37


Q ss_pred             EEEeeeeccccc
Q psy11428        147 LKIADFGFARFL  158 (160)
Q Consensus       147 ~~l~dfg~a~~~  158 (160)
                      +||+|||+++..
T Consensus       174 ~kl~dfg~~~~~  185 (299)
T d1fgka_         174 MKIADFGLARDI  185 (299)
T ss_dssp             EEECSTTCCCCG
T ss_pred             eEeccchhhccc
Confidence            899999999755

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.6e-18  Score=128.25  Aligned_cols=111  Identities=32%  Similarity=0.532  Sum_probs=97.9

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhh
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVK   84 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (160)
                      .+.....+++|+.+++.++||||+++++++.+....+++++++.++++..++...+.+++.....+..+++.++.++|..
T Consensus        41 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~  120 (292)
T d1unla_          41 DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR  120 (292)
T ss_dssp             STTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcC
Confidence            34567888999999999999999999999999999999999999998877766677889999999999999999998853


Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                       +++||||||+||+++.+          ..+|++|||.++..
T Consensus       121 ---------------------------------~IvHrDiKP~NIli~~~----------~~~kl~DFG~a~~~  151 (292)
T d1unla_         121 ---------------------------------NVLHRDLKPQNLLINRN----------GELKLANFGLARAF  151 (292)
T ss_dssp             ---------------------------------TEECCCCSGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             ---------------------------------CEeeecccCcccccccC----------Cceeeeecchhhcc
Confidence                                             68999999999999743          37899999999754

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.73  E-value=7.5e-18  Score=126.84  Aligned_cols=106  Identities=29%  Similarity=0.499  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHhhcC-CcceEEEeeeeecC--CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhh
Q psy11428          9 IVLTRHILKELTELH-HENVVELLHCKESD--QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKE   85 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~-h~~iv~l~~~~~~~--~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   85 (160)
                      ....++|+++|+.++ ||||+++++++...  ..++++|||++++++...   .+.+++..++.++.+++.++.++|.. 
T Consensus        73 ~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v~e~~~~~~L~~~---~~~l~e~~i~~i~~qil~aL~~LH~~-  148 (328)
T d3bqca1          73 KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSM-  148 (328)
T ss_dssp             HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEEEECCCSCBGGGT---TTSCCHHHHHHHHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEEEeecCCCcHHHH---hcCCCHHHHHHHHHHHHHHHHHHhhc-
Confidence            456778999999995 99999999998744  569999999999998754   35689999999999999999998863 


Q ss_pred             cCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         86 LHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        86 l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                      +++|||+||+|||++.++         ..++++|||+|+.+.
T Consensus       149 --------------------------------gIvHrDiKp~NILi~~~~---------~~vkl~DFG~a~~~~  181 (328)
T d3bqca1         149 --------------------------------GIMHRDVKPHNVMIDHEH---------RKLRLIDWGLAEFYH  181 (328)
T ss_dssp             --------------------------------TEECCCCSGGGEEEETTT---------TEEEECCGGGCEECC
T ss_pred             --------------------------------ccccccccccceEEcCCC---------Ceeeecccccceecc
Confidence                                            689999999999998532         368999999997653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=2.1e-18  Score=128.42  Aligned_cols=109  Identities=35%  Similarity=0.520  Sum_probs=82.7

Q ss_pred             hHHHHHHHHHHHHhhc-CCcceEEEeeeeec-CCcEEEEEEEeCCCceeEEEeee----------------cCCCHHHHH
Q psy11428          7 SSIVLTRHILKELTEL-HHENVVELLHCKES-DQHVYLVMEFCNGGDLADYLVSK----------------GTLSEDTIR   68 (160)
Q Consensus         7 ~~~~~~~~~~~~l~~l-~h~~iv~l~~~~~~-~~~~~lv~e~~~~g~l~~~l~~~----------------~~~~~~~~~   68 (160)
                      .....+..|...+.++ +||||+.+++++.. +..++++|||+++|++..++...                ..+++....
T Consensus        58 ~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~  137 (299)
T d1ywna1          58 SEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLI  137 (299)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHH
Confidence            3445666777777776 68899999987654 45789999999999998876432                246788889


Q ss_pred             HHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEE
Q psy11428         69 IFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLK  148 (160)
Q Consensus        69 ~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~  148 (160)
                      .+..+++.++.++|..                                 +++||||||+||+++.+          +.+|
T Consensus       138 ~~~~qi~~gl~ylH~~---------------------------------~ivHrDlKp~NILl~~~----------~~~K  174 (299)
T d1ywna1         138 CYSFQVAKGMEFLASR---------------------------------KCIHRDLAARNILLSEK----------NVVK  174 (299)
T ss_dssp             HHHHHHHHHHHHHHHT---------------------------------TCCCSCCCGGGEEECGG----------GCEE
T ss_pred             HHHHHHHHHHHHHHhC---------------------------------CCcCCcCCccceeECCC----------CcEE
Confidence            9999999999998863                                 68999999999999854          4899


Q ss_pred             Eeeeeccccc
Q psy11428        149 IADFGFARFL  158 (160)
Q Consensus       149 l~dfg~a~~~  158 (160)
                      |+|||+|+..
T Consensus       175 l~DFGla~~~  184 (299)
T d1ywna1         175 ICDFGLARDI  184 (299)
T ss_dssp             ECC------C
T ss_pred             EccCcchhhc
Confidence            9999999754

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=4.3e-18  Score=129.42  Aligned_cols=104  Identities=31%  Similarity=0.415  Sum_probs=83.4

Q ss_pred             HHHHHHHhhcCCcceEEEeeeeecC------CcEEEEEEEeCCCceeE---EEeeecCCCHHHHHHHHHHHHHHHHHhhh
Q psy11428         13 RHILKELTELHHENVVELLHCKESD------QHVYLVMEFCNGGDLAD---YLVSKGTLSEDTIRIFLKQIVQALKAFQV   83 (160)
Q Consensus        13 ~~~~~~l~~l~h~~iv~l~~~~~~~------~~~~lv~e~~~~g~l~~---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (160)
                      ++|+++|++++||||+++++++...      ..+|++|||++++....   +......+++..++.++.+++.++.++|.
T Consensus        61 ~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~  140 (350)
T d1q5ka_          61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS  140 (350)
T ss_dssp             CHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCCCcEEEEEEecCccCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence            4699999999999999999987433      34799999998764322   12234568899999999999999999885


Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .                                 +++||||||+||+++.++         ..+||+|||+++.+
T Consensus       141 ~---------------------------------~IiHrDiKp~NILl~~~~---------~~~kl~DFG~a~~~  173 (350)
T d1q5ka_         141 F---------------------------------GICHRDIKPQNLLLDPDT---------AVLKLCDFGSAKQL  173 (350)
T ss_dssp             T---------------------------------TEECCCCCGGGEEECTTT---------CCEEECCCTTCEEC
T ss_pred             c---------------------------------CCcccCCCcceEEEecCC---------CceeEecccchhhc
Confidence            3                                 689999999999997542         36899999999764

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=4.6e-18  Score=127.04  Aligned_cols=108  Identities=26%  Similarity=0.384  Sum_probs=84.0

Q ss_pred             HHHHHhhcCCcceEEEeeeeecCC----cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCc
Q psy11428         15 ILKELTELHHENVVELLHCKESDQ----HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHEN   90 (160)
Q Consensus        15 ~~~~l~~l~h~~iv~l~~~~~~~~----~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~n   90 (160)
                      |+..++.++||||+++++++.+.+    .+|+||||+++|+|..++.. ..+++.....+..+++.++.++|...+.+  
T Consensus        47 ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-~~l~~~~~~~~~~~ia~gl~~lH~~~~~~--  123 (303)
T d1vjya_          47 EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEIVGT--  123 (303)
T ss_dssp             HHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCBCST--
T ss_pred             HHHHHhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHhhhhh--
Confidence            444556789999999999887543    58999999999999988854 35777788888899999999887421111  


Q ss_pred             eeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         91 VVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        91 iv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                          +   .-.+++||||||+||+++.+          +.+||+|||+++..
T Consensus       124 --------------------~---~~~~IvHrDlKp~NILl~~~----------~~~Kl~DFGl~~~~  158 (303)
T d1vjya_         124 --------------------Q---GKPAIAHRDLKSKNILVKKN----------GTCCIADLGLAVRH  158 (303)
T ss_dssp             --------------------T---CBCEEECSCCCGGGEEECTT----------SCEEECCCTTCEEE
T ss_pred             --------------------c---cCCCeeccccCccceEEcCC----------CCeEEEecCccccc
Confidence                                0   01268999999999999754          38999999998754

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=4.5e-18  Score=128.13  Aligned_cols=107  Identities=26%  Similarity=0.451  Sum_probs=94.4

Q ss_pred             HHHHHHHHHHHhhcCC-cceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428          9 IVLTRHILKELTELHH-ENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus         9 ~~~~~~~~~~l~~l~h-~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      ...+.+|++++++++| |||+++++.+.+....++++|++.+|++..++...+..++.....++.+++.++.++|..   
T Consensus        72 ~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~al~~lH~~---  148 (322)
T d1vzoa_          72 TEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---  148 (322)
T ss_dssp             GGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHHHHHHHhccCCCeEEEeeeeeccCCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHHHHHhhcC---
Confidence            4456789999999976 899999999999999999999999999998887778888899999999999999998753   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+|++++.+          +.++|+|||+++.+
T Consensus       149 ------------------------------~ivHrDiKp~Nill~~~----------~~vkL~DFG~a~~~  179 (322)
T d1vzoa_         149 ------------------------------GIIYRDIKLENILLDSN----------GHVVLTDFGLSKEF  179 (322)
T ss_dssp             ------------------------------TCCCCCCCGGGEEECTT----------SCEEESCSSEEEEC
T ss_pred             ------------------------------CEEeccCCccceeecCC----------CCEEEeeccchhhh
Confidence                                          68999999999999854          37999999999754

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.1e-17  Score=126.73  Aligned_cols=110  Identities=36%  Similarity=0.578  Sum_probs=90.4

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeecCC------cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKESDQ------HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~------~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (160)
                      ++.....+.+|+++|+.++||||+++++++...+      .+|++|||+ +.++... ...+.+++..++.++.+++.++
T Consensus        57 ~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv~e~~-~~~l~~~-~~~~~l~~~~~~~~~~qi~~aL  134 (346)
T d1cm8a_          57 SELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKL-MKHEKLGEDRIQFLVYQMLKGL  134 (346)
T ss_dssp             SHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEEECC-SEEHHHH-HHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccccceEEEEEecc-cccHHHH-HHhccccHHHHHHHHHHHHHHH
Confidence            3445667889999999999999999999987654      579999999 4444443 3456799999999999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      .++|..                                 +++||||||+||+++.+          ..++++|||+|+..
T Consensus       135 ~~LH~~---------------------------------~IiHrDiKp~NIL~~~~----------~~~kl~Dfg~a~~~  171 (346)
T d1cm8a_         135 RYIHAA---------------------------------GIIHRDLKPGNLAVNED----------CELKILDFGLARQA  171 (346)
T ss_dssp             HHHHHT---------------------------------TEECCCCCGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             HHHHhC---------------------------------CCcccccCcchhhcccc----------cccccccccceecc
Confidence            998853                                 68999999999999854          37899999999765


Q ss_pred             C
Q psy11428        159 Q  159 (160)
Q Consensus       159 ~  159 (160)
                      .
T Consensus       172 ~  172 (346)
T d1cm8a_         172 D  172 (346)
T ss_dssp             C
T ss_pred             C
Confidence            3

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1e-17  Score=127.12  Aligned_cols=108  Identities=38%  Similarity=0.554  Sum_probs=88.9

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCC-----cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQ-----HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~-----~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      +.....+++|+++|+.++|||++++++++....     .+|++ +++.+|+|..++.. +.+++..+..++.+++.++.+
T Consensus        47 ~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~~~l~-~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~y  124 (345)
T d1pmea_          47 QTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLV-THLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKY  124 (345)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE-EECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccceEEEE-EeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHH
Confidence            344567889999999999999999999886543     24555 56778999887643 468999999999999999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..                                 +++||||||+||+++.+          +.+||+|||+++..
T Consensus       125 LH~~---------------------------------~iiHRDIKp~NILl~~~----------~~~kl~DfG~a~~~  159 (345)
T d1pmea_         125 IHSA---------------------------------NVLHRDLKPSNLLLNTT----------CDLKICDFGLARVA  159 (345)
T ss_dssp             HHHT---------------------------------TEECCCCCGGGEEECTT----------CCEEECCCTTCEEC
T ss_pred             HHHC---------------------------------CCcCCCCCcceEEECCC----------CCEEEcccCceeec
Confidence            8863                                 68999999999999744          37999999998754

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.7e-17  Score=124.29  Aligned_cols=110  Identities=28%  Similarity=0.441  Sum_probs=89.8

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeec--------CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKES--------DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQA   77 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~--------~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~   77 (160)
                      +.....+.+|+.+|+.++|||++++++++..        +..+|+++|++.++.+.........+++..++.+..|++.+
T Consensus        50 ~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~  129 (318)
T d3blha1          50 EGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNG  129 (318)
T ss_dssp             TSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHH
Confidence            3445567789999999999999999998754        34689999999887766544445568888999999999999


Q ss_pred             HHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         78 LKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        78 ~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      +.++|..                                 +++||||||+||+++.+          ..++++|||+++.
T Consensus       130 l~~lH~~---------------------------------~ivHrDlKp~NILl~~~----------~~~kl~dfg~~~~  166 (318)
T d3blha1         130 LYYIHRN---------------------------------KILHRDMKAANVLITRD----------GVLKLADFGLARA  166 (318)
T ss_dssp             HHHHHHT---------------------------------TEECCCCCGGGEEECTT----------SCEEECCCTTCEE
T ss_pred             HHHhccC---------------------------------CEEecCcCchheeecCC----------CcEEeeecceeee
Confidence            9998853                                 68999999999999854          3799999999975


Q ss_pred             c
Q psy11428        158 L  158 (160)
Q Consensus       158 ~  158 (160)
                      +
T Consensus       167 ~  167 (318)
T d3blha1         167 F  167 (318)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=1.3e-16  Score=120.65  Aligned_cols=109  Identities=31%  Similarity=0.481  Sum_probs=85.7

Q ss_pred             hhHHHHHHHHHHHHhhcCCcceEEEeeeeecCC-----cEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHH
Q psy11428          6 KSSIVLTRHILKELTELHHENVVELLHCKESDQ-----HVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKA   80 (160)
Q Consensus         6 ~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~~~-----~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~   80 (160)
                      ......+.+|+++|+.++|||++++++++....     ..+++++++.+|+|..++. .+.+++..++.++.+++.++.+
T Consensus        58 ~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~~gg~L~~~~~-~~~l~e~~~~~i~~qil~aL~~  136 (348)
T d2gfsa1          58 IIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK-CQKLTDDHVQFLIYQILRGLKY  136 (348)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHT-TCCCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccCceEEEEEeecCCchhhhcc-cccccHHHHHHHHHHHHHHHHH
Confidence            344567789999999999999999999886432     3355667788999987764 4568999999999999999999


Q ss_pred             hhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         81 FQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        81 ~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                      +|..                                 +++|||+||+||+++.+          +.++++|||++...
T Consensus       137 LH~~---------------------------------giiHrDiKp~NILi~~~----------~~~kl~dfg~a~~~  171 (348)
T d2gfsa1         137 IHSA---------------------------------DIIHRDLKPSNLAVNED----------CELKILDFGLARHT  171 (348)
T ss_dssp             HHHT---------------------------------TCCCCCCCGGGEEECTT----------CCEEECCC----CC
T ss_pred             HHhC---------------------------------CCcccccCCcccccccc----------ccccccccchhccc
Confidence            8863                                 68999999999999854          37899999998643

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.2e-16  Score=119.17  Aligned_cols=107  Identities=31%  Similarity=0.459  Sum_probs=87.5

Q ss_pred             chhHHHHHHHHHHHHhhcCCcceEEEeeeeec------CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHH
Q psy11428          5 SKSSIVLTRHILKELTELHHENVVELLHCKES------DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQAL   78 (160)
Q Consensus         5 ~~~~~~~~~~~~~~l~~l~h~~iv~l~~~~~~------~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~   78 (160)
                      +......+.+|+.+++.++||||+++++++..      ...+|+||||+.++.+...   ...+++..++.++.+++.++
T Consensus        56 ~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~---~~~~~~~~i~~~~~qil~gl  132 (355)
T d2b1pa1          56 NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---QMELDHERMSYLLYQMLCGI  132 (355)
T ss_dssp             SHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHH---TSCCCHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCceeEEEEeccchHHHHhh---hcCCCHHHHHHHHHHHHHHH
Confidence            34556778899999999999999999999863      3678999999987655432   45688999999999999999


Q ss_pred             HHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccc
Q psy11428         79 KAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARF  157 (160)
Q Consensus        79 ~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~  157 (160)
                      .++|..                                 +++|||+||+|++++.+          ..++++|||+++.
T Consensus       133 ~~LH~~---------------------------------giiHrDlKP~Nil~~~~----------~~~kl~df~~~~~  168 (355)
T d2b1pa1         133 KHLHSA---------------------------------GIIHRDLKPSNIVVKSD----------CTLKILDFGLART  168 (355)
T ss_dssp             HHHHHT---------------------------------TCCCSCCCGGGEEECTT----------CCEEECCCCC---
T ss_pred             HHhhhc---------------------------------ccccccCCccccccccc----------cceeeechhhhhc
Confidence            998863                                 68999999999999854          3689999998764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=3.7e-16  Score=116.24  Aligned_cols=102  Identities=34%  Similarity=0.545  Sum_probs=79.8

Q ss_pred             HHHHHHhhcCCcceEEEeeeee-----cCCcEEEEEEEeCCCceeEEE-eeecCCCHHHHHHHHHHHHHHHHHhhhhhcC
Q psy11428         14 HILKELTELHHENVVELLHCKE-----SDQHVYLVMEFCNGGDLADYL-VSKGTLSEDTIRIFLKQIVQALKAFQVKELH   87 (160)
Q Consensus        14 ~~~~~l~~l~h~~iv~l~~~~~-----~~~~~~lv~e~~~~g~l~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   87 (160)
                      .+++.|+..+||||+++++++.     ....+++++|++.++.+.... .....+++..++.++.+++.++.++|..   
T Consensus        59 ~~l~~l~~~~HpnIv~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~---  135 (305)
T d1blxa_          59 AVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---  135 (305)
T ss_dssp             HHHHHHHHTCCTTBCCEEEEEEEEECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---
T ss_pred             HHHHHHhhcCCCCcceeeeeecccccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---
Confidence            3444445558999999999874     335789999999988764332 2335678888999999999999998863   


Q ss_pred             CCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         88 HENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        88 h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                    +++|||+||+|||++.+          +.+|++|||+++..
T Consensus       136 ------------------------------~ivHrDiKp~NILi~~~----------~~~kl~dfg~~~~~  166 (305)
T d1blxa_         136 ------------------------------RVVHRDLKPQNILVTSS----------GQIKLADFGLARIY  166 (305)
T ss_dssp             ------------------------------TCCCCCCCGGGEEECTT----------CCEEECSCCSCCCC
T ss_pred             ------------------------------CEEecCCCccEEEEcCC----------CCeeecchhhhhhh
Confidence                                          68999999999999854          37899999998754

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.60  E-value=7.3e-16  Score=114.35  Aligned_cols=110  Identities=23%  Similarity=0.362  Sum_probs=88.4

Q ss_pred             HHHHHHHHHhhcCC-cceEEEeeeeecCCcEEEEEEEeCCCceeEEEeee-cCCCHHHHHHHHHHHHHHHHHhhhhhcCC
Q psy11428         11 LTRHILKELTELHH-ENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSK-GTLSEDTIRIFLKQIVQALKAFQVKELHH   88 (160)
Q Consensus        11 ~~~~~~~~l~~l~h-~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~h   88 (160)
                      ..+.|+++++.++| +|++.+++++.++...|++||++ ++++..++... ..++..+...++.+++.++.++|..    
T Consensus        46 ~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~vme~~-~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~----  120 (293)
T d1csna_          46 QLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK----  120 (293)
T ss_dssp             CHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT----
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEEEEec-CCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC----
Confidence            35678888888865 89999999999999999999998 67777665443 3578888999999999999988753    


Q ss_pred             CceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         89 ENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        89 ~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                   +++|||+||+|++++...     ......++++|||+|+.+.
T Consensus       121 -----------------------------giiHrDiKp~Nili~~~~-----~~~~~~vkl~DFG~a~~~~  157 (293)
T d1csna_         121 -----------------------------SLVYRDIKPDNFLIGRPN-----SKNANMIYVVDFGMVKFYR  157 (293)
T ss_dssp             -----------------------------TEECCCCCGGGEEECCSS-----STTTTCEEECCCTTCEESB
T ss_pred             -----------------------------CceeccCCccceeecCcc-----cccCCceEEcccceeEEcc
Confidence                                         689999999999997532     1123578999999998653

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.60  E-value=5.3e-16  Score=115.19  Aligned_cols=109  Identities=19%  Similarity=0.260  Sum_probs=84.1

Q ss_pred             HHHHHHHHHhhcCCcceE-EEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         11 LTRHILKELTELHHENVV-ELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        11 ~~~~~~~~l~~l~h~~iv-~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      .+..|.++++.++|+|++ .+..++.++...+++||+++++.........+.+++..+..+..+++.++.++|..     
T Consensus        48 ~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~-----  122 (299)
T d1ckia_          48 QLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK-----  122 (299)
T ss_dssp             CHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHC-----
Confidence            356788999999877655 55667788889999999985543332223345689999999999999999998863     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeecccccC
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFLQ  159 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~~  159 (160)
                                                  +++||||||+||+++..+       .+..++++|||+|+.+.
T Consensus       123 ----------------------------~iiHrDiKp~NIl~~~~~-------~~~~vkl~DFG~a~~~~  157 (299)
T d1ckia_         123 ----------------------------NFIHRDVKPDNFLMGLGK-------KGNLVYIIDFGLAKKYR  157 (299)
T ss_dssp             ----------------------------TEECSCCCGGGEEECCGG-------GTTCEEECCCSSCEECB
T ss_pred             ----------------------------CeeeccCCHhhccccccC-------CCceeeeeccCcceecc
Confidence                                        689999999999987432       34578999999998653

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.33  E-value=3.2e-12  Score=88.64  Aligned_cols=94  Identities=22%  Similarity=0.294  Sum_probs=71.5

Q ss_pred             HHHHHHHHHHhhcCCcceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCC
Q psy11428         10 VLTRHILKELTELHHENVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHE   89 (160)
Q Consensus        10 ~~~~~~~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~   89 (160)
                      ..+..|.+.+.++.|++++..++...    .+++||+++++....       ++......+..+++.++.++|..     
T Consensus        59 ~~~~~e~~~l~~l~~~~v~~~~~~~~----~~lvme~~~~~~~~~-------l~~~~~~~i~~ql~~~l~~lH~~-----  122 (191)
T d1zara2          59 RSARNEFRALQKLQGLAVPKVYAWEG----NAVLMELIDAKELYR-------VRVENPDEVLDMILEEVAKFYHR-----  122 (191)
T ss_dssp             HHHHHHHHHHHHTTTSSSCCEEEEET----TEEEEECCCCEEGGG-------CCCSCHHHHHHHHHHHHHHHHHT-----
T ss_pred             HHHHHHHHHHHHccCCCcceEEEecC----CEEEEEeeccccccc-------hhhHHHHHHHHHHHHHHHHHhhC-----
Confidence            44566788889999999988776532    379999998755432       33344556778899999888753     


Q ss_pred             ceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccccc
Q psy11428         90 NVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFARFL  158 (160)
Q Consensus        90 niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~~~  158 (160)
                                                  +++|||+||+|++++.+           .++++|||+|+..
T Consensus       123 ----------------------------giiHrDiKP~NILv~~~-----------~~~liDFG~a~~~  152 (191)
T d1zara2         123 ----------------------------GIVHGDLSQYNVLVSEE-----------GIWIIDFPQSVEV  152 (191)
T ss_dssp             ----------------------------TEECSCCSTTSEEEETT-----------EEEECCCTTCEET
T ss_pred             ----------------------------CEEEccCChhheeeeCC-----------CEEEEECCCcccC
Confidence                                        68999999999999842           4789999998654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.98  E-value=2.5e-10  Score=85.80  Aligned_cols=115  Identities=23%  Similarity=0.298  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHHHhhcC-----------CcceEEEeeeeec--CCcEEEEEEEeCCCceeEEE---eeecCCCHHHHHHHH
Q psy11428          8 SIVLTRHILKELTELH-----------HENVVELLHCKES--DQHVYLVMEFCNGGDLADYL---VSKGTLSEDTIRIFL   71 (160)
Q Consensus         8 ~~~~~~~~~~~l~~l~-----------h~~iv~l~~~~~~--~~~~~lv~e~~~~g~l~~~l---~~~~~~~~~~~~~~~   71 (160)
                      .....++|+.+++.++           ||||+++++++..  ....+.++.+...+......   .....+++..+..++
T Consensus        52 ~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~  131 (362)
T d1q8ya_          52 YTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQIS  131 (362)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHH
T ss_pred             chHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHH
Confidence            3455677888777765           5789999887754  35566777766655432221   123456788899999


Q ss_pred             HHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCCCCCeeeecCCCCCCCCCCCceEEEee
Q psy11428         72 KQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIAD  151 (160)
Q Consensus        72 ~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~d  151 (160)
                      .+++.++.++|..                                .+++|||+||+||+++..+..    .....++++|
T Consensus       132 ~qil~al~~lh~~--------------------------------~~IvHrDlKp~NIll~~~~~~----~~~~~~kl~d  175 (362)
T d1q8ya_         132 KQLLLGLDYMHRR--------------------------------CGIIHTDIKPENVLMEIVDSP----ENLIQIKIAD  175 (362)
T ss_dssp             HHHHHHHHHHHHT--------------------------------TCEECSCCSGGGEEEEEEETT----TTEEEEEECC
T ss_pred             HHHHHHHHHHhhh--------------------------------cCcccccCChhHeeeeccCcc----cccceeeEee
Confidence            9999999987742                                168999999999999854311    1224589999


Q ss_pred             eeccccc
Q psy11428        152 FGFARFL  158 (160)
Q Consensus       152 fg~a~~~  158 (160)
                      ||.++..
T Consensus       176 fg~s~~~  182 (362)
T d1q8ya_         176 LGNACWY  182 (362)
T ss_dssp             CTTCEET
T ss_pred             ccccccc
Confidence            9998644

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=7.3e-07  Score=64.94  Aligned_cols=88  Identities=25%  Similarity=0.266  Sum_probs=57.9

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHH----HHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSED----TIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ  102 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~  102 (160)
                      +.+.+|.. .-+.+|++.+...|..++.+...+......    ....+. ..+..+     .++.||||+++++++++.+
T Consensus        14 ~~~~lG~G-~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~-~E~~il-----~~l~HpnIv~~~~~~~~~~   86 (293)
T d1jksa_          14 TGEELGSG-QFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIE-REVSIL-----KEIQHPNVITLHEVYENKT   86 (293)
T ss_dssp             EEEEEEEC-SSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHH-HHHHHH-----HHCCCTTBCCEEEEEECSS
T ss_pred             EeEEEecC-CCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHH-HHHHHH-----HhCCCCCCCcEEEEEEECC
Confidence            44444422 235789988877777777776554332211    111111 122222     3578999999999999999


Q ss_pred             eeEEEEEecCCCCccccee
Q psy11428        103 HVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus       103 ~~~~~~ey~~~~~l~~iih  121 (160)
                      .++++||||.||+|..++.
T Consensus        87 ~~~iv~E~~~gg~L~~~i~  105 (293)
T d1jksa_          87 DVILILELVAGGELFDFLA  105 (293)
T ss_dssp             EEEEEEECCCSCBHHHHHH
T ss_pred             EEEEEEEcCCCccccchhc
Confidence            9999999999999976654

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=4e-06  Score=60.31  Aligned_cols=88  Identities=24%  Similarity=0.429  Sum_probs=57.4

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeee--cCCee
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKE--SDQHV  104 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~--~~~~~  104 (160)
                      +++.+|.- .-+.+|++.+..+|..++.+........+.....+.    .+++.+  .++.||||+++++.+.  ..+.+
T Consensus         8 ~~~~iG~G-~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~----~E~~il--~~l~HpnIv~~~~~~~~~~~~~~   80 (269)
T d2java1           8 VLYTIGTG-SYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLV----SEVNLL--RELKHPNIVRYYDRIIDRTNTTL   80 (269)
T ss_dssp             EEEEEEEC-SSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHH----HHHHHT--TSCCCTTBCCEEEEEEC----CE
T ss_pred             EeEEEecC-CCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHH----HHHHHH--HHCCCCCEeeEEEEEEeCCCCEE
Confidence            44555532 225789988877776777776655555554443322    222222  4589999999999884  46678


Q ss_pred             EEEEEecCCCCccccee
Q psy11428        105 YLVMEFCNGGDLARIVH  121 (160)
Q Consensus       105 ~~~~ey~~~~~l~~iih  121 (160)
                      |++||||.||+|..++.
T Consensus        81 ~ivmEy~~~g~L~~~i~   97 (269)
T d2java1          81 YIVMEYCEGGDLASVIT   97 (269)
T ss_dssp             EEEEECCTTEEHHHHHH
T ss_pred             EEEEecCCCCcHHHHHH
Confidence            99999999999976654

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.10  E-value=1.1e-06  Score=63.11  Aligned_cols=90  Identities=23%  Similarity=0.257  Sum_probs=56.8

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +.+.+|.. .-+.+|++.+.-++..++.++..+.............+.+..+     .++.||||+++++.+.+.+.+++
T Consensus        10 i~~~iG~G-~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il-----~~l~hpnIv~~~~~~~~~~~~~i   83 (263)
T d2j4za1          10 IGRPLGKG-KFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ-----SHLRHPNILRLYGYFHDATRVYL   83 (263)
T ss_dssp             EEEEEEEC-SSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHH-----HTCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEecC-CCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHH-----HhcCCCCCCeEEEEEEECCEEEE
Confidence            44444432 2257888887666666666654432221111111111112222     35889999999999999999999


Q ss_pred             EEEecCCCCcccceec
Q psy11428        107 VMEFCNGGDLARIVHR  122 (160)
Q Consensus       107 ~~ey~~~~~l~~iih~  122 (160)
                      +||||.||+|...+.+
T Consensus        84 vmEy~~~g~L~~~l~~   99 (263)
T d2j4za1          84 ILEYAPLGTVYRELQK   99 (263)
T ss_dssp             EEECCTTCBHHHHHHH
T ss_pred             EEeecCCCcHHHHHhh
Confidence            9999999999766543

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.09  E-value=7.7e-06  Score=58.87  Aligned_cols=88  Identities=23%  Similarity=0.300  Sum_probs=57.4

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.+|.. .-+.+|++.+...+..++.+........+. ...+    ..++..+  ..+.||||+++++.+++.+.+++
T Consensus         9 ~~~~lG~G-~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~----~~Ei~~l--~~l~HpnIv~~~~~~~~~~~~~i   80 (271)
T d1nvra_           9 LVQTLGEG-AYGEVQLAVNRVTEEAVAVKIVDMKRAVDC-PENI----KKEICIN--KMLNHENVVKFYGHRREGNIQYL   80 (271)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTTCCEEEEEEEECC--------CH----HHHHHHH--HTCCCTTBCCEEEEEEETTEEEE
T ss_pred             EEEEEecC-cCeEEEEEEECCCCCEEEEEEEehhhcchH-HHHH----HHHHHHH--HhCCCCCEeeEeeeeccCceeEE
Confidence            44555532 336789988877777777666543322111 1111    1122221  35789999999999999999999


Q ss_pred             EEEecCCCCcccceec
Q psy11428        107 VMEFCNGGDLARIVHR  122 (160)
Q Consensus       107 ~~ey~~~~~l~~iih~  122 (160)
                      +||||.||+|..++..
T Consensus        81 vmEy~~gg~L~~~l~~   96 (271)
T d1nvra_          81 FLEYCSGGELFDRIEP   96 (271)
T ss_dssp             EEECCTTEEGGGGSBT
T ss_pred             EEeccCCCcHHHHHhc
Confidence            9999999999877654

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=1.9e-06  Score=62.76  Aligned_cols=89  Identities=17%  Similarity=0.290  Sum_probs=57.2

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +.+.+|.. .-+.+|++.+...+..++.++..+...............+..+     .++.||||+++++.+++.+.+|+
T Consensus        12 i~~~lG~G-~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il-----~~l~HpnIv~l~~~~~~~~~~~i   85 (288)
T d1uu3a_          12 FGKILGEG-SFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM-----SRLDHPFFVKLYFTFQDDEKLYF   85 (288)
T ss_dssp             EEEEEEEC-SSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHH-----HHCCSTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeeC-CCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHH-----HHcCCCCeeEEEEEEEECCEEEE
Confidence            44555532 3367899888776767776655432211111111111122222     35789999999999999999999


Q ss_pred             EEEecCCCCccccee
Q psy11428        107 VMEFCNGGDLARIVH  121 (160)
Q Consensus       107 ~~ey~~~~~l~~iih  121 (160)
                      +||||.||+|..++.
T Consensus        86 vmEy~~gg~L~~~~~  100 (288)
T d1uu3a_          86 GLSYAKNGELLKYIR  100 (288)
T ss_dssp             EECCCTTEEHHHHHH
T ss_pred             EEEccCCCCHHHhhh
Confidence            999999999966543

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=9.9e-06  Score=58.95  Aligned_cols=77  Identities=21%  Similarity=0.386  Sum_probs=53.9

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCc
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDL  116 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l  116 (160)
                      .+.+|++.+...|..++.+...........  .+ .+.+..+     .++.||||+++++.+.+.+.++++||||.||+|
T Consensus        33 fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~--~~-~~E~~il-----~~l~HpnIv~~~~~~~~~~~~~ivmEy~~gg~L  104 (293)
T d1yhwa1          33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKE--LI-INEILVM-----RENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL  104 (293)
T ss_dssp             SCEEEEEEBTTTCCEEEEEEEEGGGCSCHH--HH-HHHHHHH-----HHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred             CcEEEEEEECCCCCEEEEEEEecccChHHH--HH-HHHHHHH-----HhCCCCCEeeEeEEEEECCEEEEEEEecCCCcH
Confidence            367899988777766776655433322211  11 1222222     357899999999999999999999999999999


Q ss_pred             cccee
Q psy11428        117 ARIVH  121 (160)
Q Consensus       117 ~~iih  121 (160)
                      ..++.
T Consensus       105 ~~~~~  109 (293)
T d1yhwa1         105 TDVVT  109 (293)
T ss_dssp             HHHHH
T ss_pred             HHHhh
Confidence            76554

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.94  E-value=1.2e-05  Score=58.93  Aligned_cols=75  Identities=21%  Similarity=0.341  Sum_probs=52.2

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+..++..++.+...............   +..++..+  .++.|||||++++++.+.+.++++||||.+|++.
T Consensus        29 g~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~---~~~Ei~il--~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~  103 (309)
T d1u5ra_          29 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQD---IIKEVRFL--QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASD  103 (309)
T ss_dssp             SEEEEEEETTTTEEEEEEEEECCSSCHHHHHHH---HHHHHHHH--TTCCCTTBCCEEEEEEETTEEEEEEECCSEEHHH
T ss_pred             eEEEEEEECCCCcEEEEEEEchhhccCHHHHHH---HHHHHHHH--HHCCCCCEeeEEEEEEECCEEEEEEEecCCCchH
Confidence            679999887766667766655444433322221   12222222  3588999999999999999999999999998774

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=1.2e-05  Score=57.83  Aligned_cols=78  Identities=22%  Similarity=0.301  Sum_probs=52.1

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec----CCeeEEEEEecCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES----DQHVYLVMEFCNG  113 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~----~~~~~~~~ey~~~  113 (160)
                      +.+|.+.+...+..++.+..............+..    +++.+  .+++||||+++++.++.    ...++++||||.|
T Consensus        23 g~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~----E~~il--~~l~HpnIv~~~~~~~~~~~~~~~~~ivmE~~~~   96 (270)
T d1t4ha_          23 KTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKE----EAEML--KGLQHPNIVRFYDSWESTVKGKKCIVLVTELMTS   96 (270)
T ss_dssp             EEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHH----HHHHH--TTCCCTTBCCEEEEEEEESSSCEEEEEEEECCCS
T ss_pred             cEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHH----HHHHH--HhCCCCCeeeEEEEEeeccccCCEEEEEEeCCCC
Confidence            56888887666666666654444444444332222    22222  35889999999998764    4568999999999


Q ss_pred             CCccccee
Q psy11428        114 GDLARIVH  121 (160)
Q Consensus       114 ~~l~~iih  121 (160)
                      |+|..++.
T Consensus        97 g~L~~~l~  104 (270)
T d1t4ha_          97 GTLKTYLK  104 (270)
T ss_dssp             CBHHHHHH
T ss_pred             CcHHHHHh
Confidence            99966554

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.93  E-value=7e-06  Score=61.53  Aligned_cols=94  Identities=15%  Similarity=0.096  Sum_probs=59.6

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeE
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY  105 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~  105 (160)
                      .+.+.+|.. .-+.+|++.+.-.|..++.+...+..+...............++.  ...+.||||++++++++..+.++
T Consensus         7 ~i~~~lG~G-~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~--l~~~~hpnIv~l~~~~~~~~~~~   83 (364)
T d1omwa3           7 SVHRIIGRG-GFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSL--VSTGDCPFIVCMSYAFHTPDKLS   83 (364)
T ss_dssp             EEEEEEEEC-SSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHH--HSSSCCTTBCCEEEEEECSSEEE
T ss_pred             eeeeEEecC-CCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHH--HhcCCCCcEEEEEEEEEECCEEE
Confidence            455666643 236789998877676677665543222111111111111112222  23578999999999999999999


Q ss_pred             EEEEecCCCCcccceec
Q psy11428        106 LVMEFCNGGDLARIVHR  122 (160)
Q Consensus       106 ~~~ey~~~~~l~~iih~  122 (160)
                      ++||||.||+|..++.+
T Consensus        84 ivmE~~~gg~L~~~l~~  100 (364)
T d1omwa3          84 FILDLMNGGDLHYHLSQ  100 (364)
T ss_dssp             EEECCCCSCBHHHHHHH
T ss_pred             EEEEecCCCcHHHHHHh
Confidence            99999999999766543

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=97.93  E-value=8.7e-06  Score=58.74  Aligned_cols=82  Identities=13%  Similarity=0.254  Sum_probs=53.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCC---CHHHHHHHHHHHHHHHHHhhhhhcC-CCceeEEeeeeecCCeeEEEEEecCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTL---SEDTIRIFLKQIVQALKAFQVKELH-HENVVELLHCKESDQHVYLVMEFCNG  113 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~-h~niv~~~~~~~~~~~~~~~~ey~~~  113 (160)
                      +.+|++.+..++..++.++..+...   ..............+...+  .++. |||++++++.+++.+.+|++||||.|
T Consensus        17 g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l--~~l~~hpnIv~~~~~~~~~~~~~ivmE~~~~   94 (277)
T d1phka_          17 SVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL--RKVSGHPNIIQLKDTYETNTFFFLVFDLMKK   94 (277)
T ss_dssp             EEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHH--HHHTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred             eEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHH--HHhcCCCCeEEEEeecccCcceEEEEEcCCC
Confidence            5788888766655566665544322   2222222222222222221  3454 99999999999999999999999999


Q ss_pred             CCccccee
Q psy11428        114 GDLARIVH  121 (160)
Q Consensus       114 ~~l~~iih  121 (160)
                      |+|...+.
T Consensus        95 g~L~~~l~  102 (277)
T d1phka_          95 GELFDYLT  102 (277)
T ss_dssp             CBHHHHHH
T ss_pred             chHHHHHH
Confidence            99976653

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.92  E-value=6.5e-06  Score=60.29  Aligned_cols=88  Identities=23%  Similarity=0.308  Sum_probs=55.8

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +.+.+|.. .-+.+|++.+..++..++.+...+....... ..+ ...+..+     .++.||||+++++.+++.+.+|+
T Consensus        13 ~~~~lG~G-~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~-~~~-~~Ei~il-----~~l~HpnIv~l~~~~~~~~~~~l   84 (307)
T d1a06a_          13 FRDVLGTG-AFSEVILAEDKRTQKLVAIKCIAKKALEGKE-GSM-ENEIAVL-----HKIKHPNIVALDDIYESGGHLYL   84 (307)
T ss_dssp             EEEESBSG-GGGGEEEEEETTTCCEEEEEEEEC------------CHHHHHH-----HTCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEeec-cCeEEEEEEECCCCCEEEEEEEchHHhhhHH-HHH-HHHHHHH-----HhCCCCCCCcEEEEEEECCEEEE
Confidence            44555432 2367899987766666666655443322211 111 1112222     35789999999999999999999


Q ss_pred             EEEecCCCCcccceec
Q psy11428        107 VMEFCNGGDLARIVHR  122 (160)
Q Consensus       107 ~~ey~~~~~l~~iih~  122 (160)
                      +||||.||+|...+.+
T Consensus        85 vmE~~~gg~L~~~l~~  100 (307)
T d1a06a_          85 IMQLVSGGELFDRIVE  100 (307)
T ss_dssp             EECCCCSCBHHHHHHT
T ss_pred             EEeccCCCcHHHhhhc
Confidence            9999999999776643

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=7.3e-06  Score=60.84  Aligned_cols=91  Identities=22%  Similarity=0.280  Sum_probs=59.6

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeE
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY  105 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~  105 (160)
                      .+++.+|.. .-+.+|++.+...+..++.+...+.......   ...++..+...+  ..++||||+++++.+++.+.++
T Consensus         8 ~~~~~lG~G-~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~---~~~~~~~E~~il--~~l~hp~Iv~l~~~~~~~~~~~   81 (337)
T d1o6la_           8 DYLKLLGKG-TFGKVILVREKATGRYYAMKILRKEVIIAKD---EVAHTVTESRVL--QNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             EEEEEEEEC-SSEEEEEEEETTTCCEEEEEEEEHHHHHHTT---CHHHHHHHHHHH--HSCCCTTBCCEEEEEECSSEEE
T ss_pred             EEEEEEecC-cCeEEEEEEECCCCCEEEEEEEchhhccCHH---HHHHHHHHHHHH--HhCCCCCEEEEEeeeccccccc
Confidence            455666533 2367899988777777776665443211111   011122222222  3578999999999999999999


Q ss_pred             EEEEecCCCCcccceec
Q psy11428        106 LVMEFCNGGDLARIVHR  122 (160)
Q Consensus       106 ~~~ey~~~~~l~~iih~  122 (160)
                      ++||||.||+|...+.+
T Consensus        82 iv~ey~~gg~L~~~~~~   98 (337)
T d1o6la_          82 FVMEYANGGELFFHLSR   98 (337)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             cceeccCCCchhhhhhc
Confidence            99999999999665543

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.88  E-value=8.9e-06  Score=59.77  Aligned_cols=89  Identities=16%  Similarity=0.241  Sum_probs=57.4

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeE
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY  105 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~  105 (160)
                      .+++.+|.. .-+.+|++.+...|..++.++..+.........   ..+..+...  ...+.||||+++++.+++.+.++
T Consensus         7 ~i~~~lG~G-~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~---~~~~~E~~i--l~~l~HpnIv~~~~~~~~~~~~~   80 (316)
T d1fota_           7 QILRTLGTG-SFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQV---EHTNDERLM--LSIVTHPFIIRMWGTFQDAQQIF   80 (316)
T ss_dssp             EEEEEEEEC-SSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCH---HHHHHHHHH--HHSCCBTTBCCEEEEEECSSEEE
T ss_pred             EEEEEEecC-cCcEEEEEEECCCCCEEEEEEEchHHccCHHHH---HHHHHHHHH--HHhccCcChhheeeeEeeCCeee
Confidence            355666543 336789998877676677666543221111111   111122222  13578999999999999999999


Q ss_pred             EEEEecCCCCcccce
Q psy11428        106 LVMEFCNGGDLARIV  120 (160)
Q Consensus       106 ~~~ey~~~~~l~~ii  120 (160)
                      ++||||.|+++..++
T Consensus        81 ivmE~~~gg~l~~~~   95 (316)
T d1fota_          81 MIMDYIEGGELFSLL   95 (316)
T ss_dssp             EEECCCCSCBHHHHH
T ss_pred             eEeeecCCccccccc
Confidence            999999999885443

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=97.88  E-value=3.5e-05  Score=57.37  Aligned_cols=85  Identities=20%  Similarity=0.279  Sum_probs=56.4

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.+|.. .-+.+|++.+...+..++.+.......  .... .+.   .++..+  .++.||||+++++++++.+.+++
T Consensus        33 i~~~lG~G-~fg~V~~a~~~~~~~~vAiK~i~~~~~--~~~~-~~~---~Ei~il--~~l~HpnIv~~~~~~~~~~~~~i  103 (352)
T d1koba_          33 ILEELGSG-AFGVVHRCVEKATGRVFVAKFINTPYP--LDKY-TVK---NEISIM--NQLHHPKLINLHDAFEDKYEMVL  103 (352)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTTCCEEEEEEEECCSH--HHHH-HHH---HHHHHH--TTCCSTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEecC-CCeEEEEEEECCCCCEEEEEEECCcch--hHHH-HHH---HHHHHH--HhCCCCCCCcEEEEEEECCEEEE
Confidence            44555432 336789988877776777665543221  1111 111   222222  35889999999999999999999


Q ss_pred             EEEecCCCCcccce
Q psy11428        107 VMEFCNGGDLARIV  120 (160)
Q Consensus       107 ~~ey~~~~~l~~ii  120 (160)
                      +||||.||+|...+
T Consensus       104 vmE~~~gg~L~~~~  117 (352)
T d1koba_         104 ILEFLSGGELFDRI  117 (352)
T ss_dssp             EEECCCCCBHHHHT
T ss_pred             EEEcCCCChHHHHH
Confidence            99999999986543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=1.4e-05  Score=58.75  Aligned_cols=88  Identities=20%  Similarity=0.270  Sum_probs=58.4

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.+|.. .-+.+|++.+..++..++.+.......+ ....    ++..++..+  .++.|||||++++.+++...+++
T Consensus        10 ~~~~iG~G-~fg~V~~~~~~~~~~~vAiK~i~~~~~~-~~~~----~~~~Ei~il--~~l~HpnIv~l~~~~~~~~~~~i   81 (322)
T d1s9ja_          10 KISELGAG-NGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRN----QIIRELQVL--HECNSPYIVGFYGAFYSDGEISI   81 (322)
T ss_dssp             EEEEEECC-SSCCEEEEEETTTTEEEEEEEEECCCCT-THHH----HHHHHGGGG--GGCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEEecC-CCeEEEEEEECCCCcEEEEEEEChhhCH-HHHH----HHHHHHHHH--HhCCCCCCCcEEEEEEECCEEEE
Confidence            44555533 3367899887666656666654433222 1111    222233322  46899999999999999999999


Q ss_pred             EEEecCCCCcccceec
Q psy11428        107 VMEFCNGGDLARIVHR  122 (160)
Q Consensus       107 ~~ey~~~~~l~~iih~  122 (160)
                      +||||.||+|..++++
T Consensus        82 VmEy~~gg~L~~~l~~   97 (322)
T d1s9ja_          82 CMEHMDGGSLDQVLKK   97 (322)
T ss_dssp             EEECCTTEEHHHHHHH
T ss_pred             EEEcCCCCcHHHHHhh
Confidence            9999999999776653

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=1.6e-05  Score=58.50  Aligned_cols=76  Identities=18%  Similarity=0.220  Sum_probs=52.1

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+...+..++.+......   .... .....+..+     ..+.||||+++++.+++.+.+|++||||.|++|.
T Consensus        19 g~Vy~~~~~~~~~~~AiK~i~~~~---~~~~-~~~~Ei~il-----~~l~HpnIv~~~~~~~~~~~~~lvmE~~~gg~L~   89 (321)
T d1tkia_          19 GIVHRCVETSSKKTYMAKFVKVKG---TDQV-LVKKEISIL-----NIARHRNILHLHESFESMEELVMIFEFISGLDIF   89 (321)
T ss_dssp             EEEEEEEETTTTEEEEEEEECCCT---HHHH-HHHHHHHHH-----HHSCCTTBCCEEEEEEETTEEEEEECCCCCCBHH
T ss_pred             eEEEEEEECCCCcEEEEEEEcCCc---ccHH-HHHHHHHHH-----HhCCCCCCCeEEEEEEECCEEEEEEecCCCCcHH
Confidence            568888776666566665543321   1111 111222222     3578999999999999999999999999999997


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      ..+..
T Consensus        90 ~~i~~   94 (321)
T d1tkia_          90 ERINT   94 (321)
T ss_dssp             HHHTS
T ss_pred             HHHHh
Confidence            76643

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=97.82  E-value=2.7e-05  Score=57.98  Aligned_cols=86  Identities=26%  Similarity=0.333  Sum_probs=56.2

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +.+.+|.. .-+.+|++.+...|..++.+......  ......+ ...+..+     .++.||||+++++++++.+.+++
T Consensus        30 i~~~lG~G-~fg~Vy~~~~~~~g~~vAvK~i~~~~--~~~~~~~-~~E~~il-----~~l~HpnIv~~~~~~~~~~~~~i  100 (350)
T d1koaa2          30 IHEELGTG-AFGVVHRVTERATGNNFAAKFVMTPH--ESDKETV-RKEIQTM-----SVLRHPTLVNLHDAFEDDNEMVM  100 (350)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTTTEEEEEEEECCCS--HHHHHHH-HHHHHHH-----HHTCCTTBCCEEEEEEETTEEEE
T ss_pred             EEEEEecC-cCeEEEEEEECCCCCEEEEEEEcccc--hhhHHHH-HHHHHHH-----HhCCCCCCCcEEEEEEECCEEEE
Confidence            34444432 33678998887666666665543322  1111111 1222222     35789999999999999999999


Q ss_pred             EEEecCCCCccccee
Q psy11428        107 VMEFCNGGDLARIVH  121 (160)
Q Consensus       107 ~~ey~~~~~l~~iih  121 (160)
                      +||||.||+|...+.
T Consensus       101 vmE~~~gg~L~~~l~  115 (350)
T d1koaa2         101 IYEFMSGGELFEKVA  115 (350)
T ss_dssp             EECCCCSCBHHHHHT
T ss_pred             EEEcCCCCCHHHHHH
Confidence            999999999976653

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=1e-05  Score=59.61  Aligned_cols=90  Identities=19%  Similarity=0.238  Sum_probs=57.3

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCC-CHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTL-SEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVY  105 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~  105 (160)
                      +.+.+|.. .-+.+|++.+...+..++.+...+... ..........+... +    ...+.||||+++++++++.+.+|
T Consensus         6 i~~~iG~G-~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~-l----~~~~~hp~Iv~~~~~~~~~~~~y   79 (320)
T d1xjda_           6 LHKMLGKG-SFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV-L----SLAWEHPFLTHMFCTFQTKENLF   79 (320)
T ss_dssp             EEEEEEEC-SSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHH-H----HHHTTCTTBCCEEEEEECSSEEE
T ss_pred             EeeEEecC-CCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHH-H----HHhCCCCcEEEEEEEEccCCcee
Confidence            44455433 236789998877776667666543211 11111111222111 1    12478999999999999999999


Q ss_pred             EEEEecCCCCcccceec
Q psy11428        106 LVMEFCNGGDLARIVHR  122 (160)
Q Consensus       106 ~~~ey~~~~~l~~iih~  122 (160)
                      ++||||.||+|..++..
T Consensus        80 ivmEy~~~g~L~~~i~~   96 (320)
T d1xjda_          80 FVMEYLNGGDLMYHIQS   96 (320)
T ss_dssp             EEEECCTTCBHHHHHHH
T ss_pred             EEEeecCCCcHHHHhhc
Confidence            99999999999766543

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1.7e-05  Score=57.43  Aligned_cols=86  Identities=19%  Similarity=0.319  Sum_probs=56.4

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.+|.. .-+.+|++.+.-.+..++.+.........  ...+.. .++.+     .++.|||||++++++.+.+.+++
T Consensus        16 i~~~iG~G-~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~--~~~~~~-E~~il-----~~l~HpnIv~l~~~~~~~~~~~l   86 (288)
T d2jfla1          16 IIGELGDG-AFGKVYKAQNKETSVLAAAKVIDTKSEEE--LEDYMV-EIDIL-----ASCDHPNIVKLLDAFYYENNLWI   86 (288)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTTCCEEEEEEEECSSSGG--GGGTHH-HHHHH-----HHCCCTTBCCEEEEEEETTEEEE
T ss_pred             EeEEEeeC-CCcEEEEEEECCCCeEEEEEEECcCCHHH--HHHHHH-HHHHH-----HhCCCCCCCeEEEEEeeCCeEEE
Confidence            34444432 33678888877666666666554332211  111111 12222     35789999999999999999999


Q ss_pred             EEEecCCCCccccee
Q psy11428        107 VMEFCNGGDLARIVH  121 (160)
Q Consensus       107 ~~ey~~~~~l~~iih  121 (160)
                      +||||.||+|..++.
T Consensus        87 vmEy~~~g~L~~~~~  101 (288)
T d2jfla1          87 LIEFCAGGAVDAVML  101 (288)
T ss_dssp             EEECCTTEEHHHHHH
T ss_pred             EEecCCCCcHHHHHH
Confidence            999999999976643

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=3.6e-05  Score=56.12  Aligned_cols=80  Identities=24%  Similarity=0.348  Sum_probs=50.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecC-CCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeeecCCeeEEEEEecCCCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKESDQHVYLVMEFCNGGD  115 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~~~~~~~~~ey~~~~~  115 (160)
                      +.+|++...-.+......++.... ........+..+ +..+     .++ .||||+++++.+...+..+++||||.||+
T Consensus        24 g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E-~~~l-----~~l~~HpnIv~~~~~~~~~~~~~iV~ey~~~g~   97 (309)
T d1fvra_          24 GQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGE-LEVL-----CKLGHHPNIINLLGACEHRGYLYLAIEYAPHGN   97 (309)
T ss_dssp             CEEEEEEEEETTEEEEEEEEEEECC------CHHHHH-HHHH-----TTCCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred             cEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHH-HHHH-----HhccCCCCEeeEEEEEecCCeeEEEEEecCCCc
Confidence            668888776655444333332211 122222222222 2222     235 69999999999999999999999999999


Q ss_pred             cccceecC
Q psy11428        116 LARIVHRD  123 (160)
Q Consensus       116 l~~iih~d  123 (160)
                      |..+++..
T Consensus        98 L~~~l~~~  105 (309)
T d1fvra_          98 LLDFLRKS  105 (309)
T ss_dssp             HHHHHHTT
T ss_pred             HHHHHhhc
Confidence            98888754

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=2.4e-05  Score=57.49  Aligned_cols=37  Identities=35%  Similarity=0.644  Sum_probs=34.2

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      +|||||++++.+...+.++++||||.+|+|..+++..
T Consensus        99 ~HpnIv~l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~  135 (325)
T d1rjba_          99 SHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSK  135 (325)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTT
T ss_pred             CCCcEeEEEEEEeeCCeEEEEEEcCCCCcHHHHHHhc
Confidence            7999999999999999999999999999998887643

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.64  E-value=6.9e-05  Score=53.58  Aligned_cols=88  Identities=22%  Similarity=0.303  Sum_probs=54.9

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC----
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ----  102 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~----  102 (160)
                      +.+.+|.- .-+.+|++.+...+..++.++................+.+..+     ..++|||++++++.++..+    
T Consensus        11 i~~~lG~G-~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l-----~~~~hpniv~~~~~~~~~~~~~~   84 (277)
T d1o6ya_          11 LGEILGFG-GMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNA-----AALNHPAIVAVYDTGEAETPAGP   84 (277)
T ss_dssp             EEEEEEEC-SSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHH-----HTCCCTTBCCEEEEEEEECSSSE
T ss_pred             EeEEEeeC-CCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHH-----HhcCCCCCCcccceeeeccCCCc
Confidence            44555432 3367899988777767776665443333222222222222222     3589999999999887654    


Q ss_pred             eeEEEEEecCCCCcccce
Q psy11428        103 HVYLVMEFCNGGDLARIV  120 (160)
Q Consensus       103 ~~~~~~ey~~~~~l~~ii  120 (160)
                      ..|++||||.|++|...+
T Consensus        85 ~~~lvmE~~~g~~L~~~~  102 (277)
T d1o6ya_          85 LPYIVMEYVDGVTLRDIV  102 (277)
T ss_dssp             EEEEEEECCCEEEHHHHH
T ss_pred             eEEEEEECCCCCEehhhh
Confidence            389999999999886443

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.60  E-value=4.9e-05  Score=54.87  Aligned_cols=76  Identities=25%  Similarity=0.323  Sum_probs=51.6

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.+.-.+..++.+..........   .+.. .+..+     .++.|||||++++.+.+.+.++++||||.+|++.
T Consensus        31 g~Vy~a~~~~~~~~vAvK~i~~~~~~~~---~~~~-E~~il-----~~l~HpnIv~~~~~~~~~~~~~iv~E~~~~g~l~  101 (287)
T d1opja_          31 GEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLK-EAAVM-----KEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL  101 (287)
T ss_dssp             SSEEEEEEGGGTEEEEEEECCTTCSCHH---HHHH-HHHHH-----HHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred             eEEEEEEECCCCeEEEEEEECCccchHH---HHHH-HHHHH-----HhCCCCCEecCCccEeeCCeeEEEeecccCcchH
Confidence            5788887765555566554433322211   1222 12222     3578999999999999999999999999999987


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .++++
T Consensus       102 ~~l~~  106 (287)
T d1opja_         102 DYLRE  106 (287)
T ss_dssp             HHHHH
T ss_pred             HHhhh
Confidence            66543

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.59  E-value=9.1e-05  Score=53.71  Aligned_cols=89  Identities=18%  Similarity=0.212  Sum_probs=53.6

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEE-Eee-ecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCee
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADY-LVS-KGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHV  104 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~-l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~  104 (160)
                      +.+++|.. .-+.+|++.....++..... ++. .....+.....+..    ++..+  .+++|||||++++++...+.+
T Consensus        30 ~~~~lG~G-~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~----E~~~l--~~l~HpnIv~l~g~~~~~~~~  102 (299)
T d1jpaa_          30 IEQVIGAG-EFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLS----EASIM--GQFDHPNVIHLEGVVTKSTPV  102 (299)
T ss_dssp             EEEEEEEC-SSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHH----HHHHH--TTCCCTTBCCEEEEECSSSSC
T ss_pred             EeeEEeeC-CCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHH----HHHHH--HhCCCCCCccEEEEEeeCCEE
Confidence            34455532 33678988776555442222 221 11223333332322    22222  358899999999999999999


Q ss_pred             EEEEEecCCCCcccceec
Q psy11428        105 YLVMEFCNGGDLARIVHR  122 (160)
Q Consensus       105 ~~~~ey~~~~~l~~iih~  122 (160)
                      +++||||.+|+|..++.+
T Consensus       103 ~iv~Ey~~~g~L~~~~~~  120 (299)
T d1jpaa_         103 MIITEFMENGSLDSFLRQ  120 (299)
T ss_dssp             EEEEECCTTEEHHHHHHT
T ss_pred             EEEEEecCCCcceeeecc
Confidence            999999999999766554

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=0.00017  Score=51.23  Aligned_cols=75  Identities=24%  Similarity=0.327  Sum_probs=49.5

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.. ..+..++.+...........   +.    .++..+  .+++||||+++++.+...+.++++||||.+|+|.
T Consensus        19 g~Vy~~~~-~~~~~vAvK~i~~~~~~~~~---~~----~E~~~l--~~l~HpnIv~~~g~~~~~~~~~lv~E~~~~g~L~   88 (263)
T d1sm2a_          19 GLVHLGYW-LNKDKVAIKTIREGAMSEED---FI----EEAEVM--MKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS   88 (263)
T ss_dssp             CCEEEEEE-TTTEEEEEEECCSSSSCHHH---HH----HHHHHH--HHCCCTTBCCEEEEECSSSSCEEEEECCTTCBHH
T ss_pred             eEEEEEEE-CCCCEEEEEEECCCcCcHHH---HH----HHHHHH--HhcCCCCcccccceeccCCceEEEEEecCCCcHH
Confidence            57888764 33334554443333333322   22    222222  3578999999999999999999999999999997


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .+++.
T Consensus        89 ~~l~~   93 (263)
T d1sm2a_          89 DYLRT   93 (263)
T ss_dssp             HHHHT
T ss_pred             HHhhc
Confidence            76544

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=5.2e-05  Score=55.99  Aligned_cols=72  Identities=15%  Similarity=0.243  Sum_probs=48.8

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec----CCeeEEEEEecCC
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES----DQHVYLVMEFCNG  113 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~----~~~~~~~~ey~~~  113 (160)
                      +.+|++.+..++..++.+.....   ..    ...+ +..+    .....|||++++++.+++    ...++++||||.|
T Consensus        26 g~Vy~a~~~~~~~~vAiK~i~~~---~~----~~~E-~~~~----~~~~~hpnIv~l~~~~~~~~~~~~~~~ivmEy~~g   93 (335)
T d2ozaa1          26 GKVLQIFNKRTQEKFALKMLQDC---PK----ARRE-VELH----WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDG   93 (335)
T ss_dssp             CEEEEEEETTTCCEEEEEEEECS---HH----HHHH-HHHH----HHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCCS
T ss_pred             eEEEEEEECCCCCEEEEEEECCc---HH----HHHH-HHHH----HHhcCCCCCCeEEEEEeecccCCCEEEEEEECCCC
Confidence            67899988777767776654332   11    1111 1111    112579999999998875    4668999999999


Q ss_pred             CCccccee
Q psy11428        114 GDLARIVH  121 (160)
Q Consensus       114 ~~l~~iih  121 (160)
                      |+|..++.
T Consensus        94 g~L~~~i~  101 (335)
T d2ozaa1          94 GELFSRIQ  101 (335)
T ss_dssp             EEHHHHHH
T ss_pred             CcHHHHHH
Confidence            99987764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=0.0002  Score=51.56  Aligned_cols=35  Identities=29%  Similarity=0.564  Sum_probs=30.1

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccce
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV  120 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~ii  120 (160)
                      ++.|||||++++.+++ +.++++||||.+|+|..++
T Consensus        65 ~l~HpnIv~l~g~~~~-~~~~lvmE~~~~g~L~~~l   99 (285)
T d1u59a_          65 QLDNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFL   99 (285)
T ss_dssp             HCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHH
T ss_pred             hCCCCCEeeEeeeecc-CeEEEEEEeCCCCcHHHHh
Confidence            5789999999998875 5689999999999997654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.39  E-value=0.00012  Score=54.29  Aligned_cols=89  Identities=18%  Similarity=0.284  Sum_probs=57.1

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.+|.. .-+.+|++.+...|..++.+...+.......   ....+..++..+  ..+.||||+++++.+.....+++
T Consensus        45 i~~~lG~G-~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~---~~~~~~~E~~il--~~l~hpnIv~~~~~~~~~~~~~~  118 (350)
T d1rdqe_          45 RIKTLGTG-SFGRVMLVKHKESGNHYAMKILDKQKVVKLK---QIEHTLNEKRIL--QAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             EEEEEEEC-SSCEEEEEEETTTCCEEEEEEEEHHHHHHTT---CHHHHHHHHHHH--TTCCCTTBCCEEEEEECSSEEEE
T ss_pred             EEEEeecC-cCcEEEEEEECCCCCEEEEEEEchHHccCHH---HHHHHHHHHHHH--HHcCCCcEeeccccccccccccc
Confidence            44445432 3367899988777777776654432111110   011122222222  35789999999999999999999


Q ss_pred             EEEecCCCCccccee
Q psy11428        107 VMEFCNGGDLARIVH  121 (160)
Q Consensus       107 ~~ey~~~~~l~~iih  121 (160)
                      +|||+.||++...+.
T Consensus       119 v~e~~~~g~l~~~l~  133 (350)
T d1rdqe_         119 VMEYVAGGEMFSHLR  133 (350)
T ss_dssp             EEECCTTCBHHHHHH
T ss_pred             ccccccccchhhhHh
Confidence            999999999865543

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=7.8e-05  Score=53.86  Aligned_cols=87  Identities=21%  Similarity=0.202  Sum_probs=51.2

Q ss_pred             EEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEE
Q psy11428         29 ELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVM  108 (160)
Q Consensus        29 ~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~  108 (160)
                      .++|.. .-+.+|++.+..+|..++.+............ .....+..++..+  .+++||||+++++++...+.++++|
T Consensus         4 ~~lG~G-~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~-~~~~~~~~Ei~il--~~l~hpnIv~~~~~~~~~~~~~ivm   79 (299)
T d1ua2a_           4 DFLGEG-QFATVYKARDKNTNQIVAIKKIKLGHRSEAKD-GINRTALREIKLL--QELSHPNIIGLLDAFGHKSNISLVF   79 (299)
T ss_dssp             EEEEEE-TTEEEEEEECSSCCSEEEEEEC-------------CTHHHHHHHHH--HHCCCTTBCCEEEEECCTTCCEEEE
T ss_pred             eEeccC-cCeEEEEEEECCCCcEEEEEEEehhhhhhhhH-HHHHHHHHHHHHH--HhCCCCCEeEEEeeeccCCceeehh
Confidence            444432 33678988877666667666543322211110 0011111222221  3578999999999999999999999


Q ss_pred             EecCCCCcccc
Q psy11428        109 EFCNGGDLARI  119 (160)
Q Consensus       109 ey~~~~~l~~i  119 (160)
                      |||.++.+..+
T Consensus        80 E~~~~~~~~~~   90 (299)
T d1ua2a_          80 DFMETDLEVII   90 (299)
T ss_dssp             ECCSEEHHHHH
T ss_pred             hhhcchHHhhh
Confidence            99998876443

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=0.00034  Score=50.41  Aligned_cols=83  Identities=25%  Similarity=0.294  Sum_probs=52.8

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.+|.. .-+.+|++.+...+..++.+........+....    ++..++..+  .+++||||+++++.+++.+.+++
T Consensus         6 ~~~~lG~G-~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~----~~~~Ei~il--~~l~Hp~Iv~~~~~~~~~~~~~i   78 (298)
T d1gz8a_           6 KVEKIGEG-TYGVVYKARNKLTGEVVALKKIRLDTETEGVPS----TAIREISLL--KELNHPNIVKLLDVIHTENKLYL   78 (298)
T ss_dssp             EEEEEEEC-SSSEEEEEEETTTCCEEEEEEEC-------CCH----HHHHHHHHH--TTCCCTTBCCEEEEEEETTEEEE
T ss_pred             eccEEecC-cCeEEEEEEECCCCCEEEEEEEehhhcChHHHH----HHHHHHHHH--HhCCCCcEEEeccccccccceeE
Confidence            45555543 347899999877777677665433222111111    122222222  35889999999999999999999


Q ss_pred             EEEecCCCCc
Q psy11428        107 VMEFCNGGDL  116 (160)
Q Consensus       107 ~~ey~~~~~l  116 (160)
                      +||||.++.+
T Consensus        79 v~e~~~~~~~   88 (298)
T d1gz8a_          79 VFEFLHQDLK   88 (298)
T ss_dssp             EEECCSEEHH
T ss_pred             EEeecCCchh
Confidence            9999987644

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.22  E-value=0.0005  Score=48.60  Aligned_cols=72  Identities=22%  Similarity=0.333  Sum_probs=48.7

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|++.. -++..++.+............   ..    ++..+  .+++||||++++..+.+.+.++++|||+.+|++.
T Consensus        18 g~Vy~~~~-~~~~~vAvK~l~~~~~~~~~~---~~----Ev~~~--~~l~HpnIv~~~g~~~~~~~~~iv~Ey~~~g~l~   87 (258)
T d1k2pa_          18 GVVKYGKW-RGQYDVAIKMIKEGSMSEDEF---IE----EAKVM--MNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL   87 (258)
T ss_dssp             EEEEEEEE-TTTEEEEEEEEESSSSCHHHH---HH----HHHHH--HTCCCTTBCCEEEEECCSSSEEEEEECCTTEEHH
T ss_pred             eEEEEEEE-CCCCEEEEEEECcCcCCHHHH---HH----HHHHH--HhcCCCceeeEEEEEeeCCceEEEEEccCCCcHH
Confidence            56788774 333356655545444444322   21    22221  3578999999999999999999999999999875


Q ss_pred             cc
Q psy11428        118 RI  119 (160)
Q Consensus       118 ~i  119 (160)
                      ..
T Consensus        88 ~~   89 (258)
T d1k2pa_          88 NY   89 (258)
T ss_dssp             HH
T ss_pred             Hh
Confidence            54

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00065  Score=48.48  Aligned_cols=38  Identities=24%  Similarity=0.418  Sum_probs=31.5

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+++||||+++++.++. +..+++||||.+|+|..++++
T Consensus        63 ~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~g~L~~~l~~  100 (277)
T d1xbba_          63 QQLDNPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQ  100 (277)
T ss_dssp             HTCCCTTBCCEEEEEES-SSEEEEEECCTTEEHHHHHHH
T ss_pred             HhCCCCCCceEEEEecc-CCEEEEEEcCCCCcHHHHHhh
Confidence            35789999999999865 457899999999999766554

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.94  E-value=0.00078  Score=48.72  Aligned_cols=38  Identities=32%  Similarity=0.477  Sum_probs=34.4

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .+++||||+++++.+......+++|||+.+|++..+++
T Consensus        78 ~~l~h~nIv~~~~~~~~~~~~~lv~e~~~~g~l~~~~~  115 (308)
T d1p4oa_          78 KEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR  115 (308)
T ss_dssp             GGCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHH
T ss_pred             HHcCCCCEeeeeeEEecCCceeEEEeecCCCCHHHHHH
Confidence            46899999999999999999999999999999977665

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.93  E-value=0.00038  Score=50.48  Aligned_cols=39  Identities=28%  Similarity=0.486  Sum_probs=35.2

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceecCCC
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHRDLK  125 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~dlk  125 (160)
                      +|||||++++.+.+.+..+++||||.+|++..++++...
T Consensus        85 ~HpnIv~~~g~~~~~~~~~lvmE~~~~g~l~~~l~~~~~  123 (311)
T d1t46a_          85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRD  123 (311)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEEECCTTEEHHHHHHHTTT
T ss_pred             CCCCEEEEEEEEeeCCEEEEEEEcCCCCCHHHHHHhccc
Confidence            699999999999999999999999999999888776543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00069  Score=48.35  Aligned_cols=75  Identities=20%  Similarity=0.364  Sum_probs=47.2

Q ss_pred             CcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEEEEEecCCCCcc
Q psy11428         38 QHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYLVMEFCNGGDLA  117 (160)
Q Consensus        38 ~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~  117 (160)
                      +.+|.+.   .++.++.+..............+..+ +..+     .+++||||++++.... ...++++||||.||+|.
T Consensus        22 g~Vy~~~---~~~~vAvK~~~~~~~~~~~~~~~~~E-~~~l-----~~l~HpnIv~~~~~~~-~~~~~lv~Ey~~~g~L~   91 (276)
T d1uwha_          22 GTVYKGK---WHGDVAVKMLNVTAPTPQQLQAFKNE-VGVL-----RKTRHVNILLFMGYST-APQLAIVTQWCEGSSLY   91 (276)
T ss_dssp             CEEEEEE---SSSEEEEEECCCSSCCTTHHHHHHHH-HHHH-----TTCCCTTBCCEEEEEC-SSSCEEEEECCCEEEHH
T ss_pred             cEEEEEE---ECCEEEEEEEEcccCCHHHHHHHHHH-HHHH-----HhCCCCCEeeeeEEEe-ccEEEEEEecCCCCCHH
Confidence            5677763   24556655544333333333333222 2222     3588999999998754 56789999999999998


Q ss_pred             cceec
Q psy11428        118 RIVHR  122 (160)
Q Consensus       118 ~iih~  122 (160)
                      .+++.
T Consensus        92 ~~l~~   96 (276)
T d1uwha_          92 HHLHI   96 (276)
T ss_dssp             HHHHT
T ss_pred             HHHhh
Confidence            77653

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.0024  Score=45.16  Aligned_cols=36  Identities=25%  Similarity=0.675  Sum_probs=30.2

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccce
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV  120 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~ii  120 (160)
                      .+++||||+++++++. .+.++++||||.+|++..++
T Consensus        63 ~~l~HpnIv~l~~~~~-~~~~~iv~E~~~~g~l~~~~   98 (273)
T d1mp8a_          63 RQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFL   98 (273)
T ss_dssp             HTCCCTTBCCEEEEEC-SSSCEEEEECCTTEEHHHHH
T ss_pred             HhCCCCCEeeEEEEEe-cCeEEEEEEeccCCcHHhhh
Confidence            3578999999999986 46789999999999886543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.83  E-value=0.0018  Score=45.86  Aligned_cols=36  Identities=25%  Similarity=0.608  Sum_probs=29.6

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccce
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV  120 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~ii  120 (160)
                      .++.||||+++++.+. .+.++++||||.+|+|...+
T Consensus        63 ~~l~HpnIv~~~g~~~-~~~~~iv~Ey~~~g~L~~~~   98 (272)
T d1qpca_          63 KQLQHQRLVRLYAVVT-QEPIYIITEYMENGSLVDFL   98 (272)
T ss_dssp             HHCCCTTBCCEEEEEC-SSSCEEEEECCTTCBHHHHT
T ss_pred             HhCCCCCEeEEEeeec-cCCeEEEEEeCCCCcHHHHH
Confidence            3578999999999775 45679999999999986543

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0018  Score=47.65  Aligned_cols=84  Identities=19%  Similarity=0.202  Sum_probs=53.4

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeee------
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKE------   99 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~------   99 (160)
                      .+++.+|... -+.+|++.+..+|..++.+...+..........+..    ++..+  ..++|||++++++++.      
T Consensus        20 ~i~~~LG~G~-fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~----Ei~il--~~l~hpnIv~~~~~f~~~~~~~   92 (355)
T d2b1pa1          20 QNLKPIGSGA-QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR----ELVLM--KCVNHKNIISLLNVFTPQKTLE   92 (355)
T ss_dssp             EEEEECSCC---CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHH----HHHHH--HHCCCTTBCCCSEEECSCCSTT
T ss_pred             EEEEEeecCc-CeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHH----HHHHH--HhcCCCCeeEEEEEEecccccc
Confidence            3455555332 257899888777777777766544444433332222    22221  3578999999999985      


Q ss_pred             cCCeeEEEEEecCCCCc
Q psy11428        100 SDQHVYLVMEFCNGGDL  116 (160)
Q Consensus       100 ~~~~~~~~~ey~~~~~l  116 (160)
                      ....++++||||.++.+
T Consensus        93 ~~~~~~iv~Ey~~~~l~  109 (355)
T d2b1pa1          93 EFQDVYLVMELMDANLC  109 (355)
T ss_dssp             TCCEEEEEEECCSEEHH
T ss_pred             cCceeEEEEeccchHHH
Confidence            44788999999987655

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0045  Score=44.67  Aligned_cols=39  Identities=26%  Similarity=0.469  Sum_probs=32.6

Q ss_pred             hcCCCceeEEeeeee-cCCeeEEEEEecCCCCcccceecC
Q psy11428         85 ELHHENVVELLHCKE-SDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        85 ~l~h~niv~~~~~~~-~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      +++|||+++++..+. ..+..+++||||.++++..+++..
T Consensus        84 ~l~HpnIv~~~g~~~~~~~~~~lv~E~~~~g~l~~~~~~~  123 (311)
T d1r0pa_          84 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE  123 (311)
T ss_dssp             TCCCTTBCCCCEEEEETTTEEEEEEECCTTCBHHHHHHCT
T ss_pred             hCCCCCEeEEeEEEEecCCceEEEEEEeecCchhhhhccc
Confidence            588999999998865 466899999999999997766543

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.002  Score=45.86  Aligned_cols=86  Identities=17%  Similarity=0.223  Sum_probs=50.3

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCce----eEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDL----ADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ  102 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~  102 (160)
                      +.+++|... -+.+|.+.....++..    +.+... ....+.....+..    ++..+  .+++|||||++++.+....
T Consensus        11 ~~~~iG~G~-fG~Vy~~~~~~~~~~~~~~vAvK~~~-~~~~~~~~~~~~~----E~~il--~~l~H~nIv~~~g~~~~~~   82 (283)
T d1mqba_          11 RQKVIGAGE-FGEVYKGMLKTSSGKKEVPVAIKTLK-AGYTEKQRVDFLG----EAGIM--GQFSHHNIIRLEGVISKYK   82 (283)
T ss_dssp             EEEEEEECS-SSEEEEEEEEC---CCEEEEEEEEEC-TTCCHHHHHHHHH----HHHHH--HTCCCTTBCCEEEEECSSS
T ss_pred             eeeEEeeCC-CeEEEEEEEeCCCCEEEEEEEEEEEC-cccChHHHHHHHH----HHHHH--HhcCCCCEeeeeEEEecCC
Confidence            445555432 2568887655444432    222211 1223333222222    22222  3578999999999999999


Q ss_pred             eeEEEEEecCCCCcccce
Q psy11428        103 HVYLVMEFCNGGDLARIV  120 (160)
Q Consensus       103 ~~~~~~ey~~~~~l~~ii  120 (160)
                      ..+++||||.++.+...+
T Consensus        83 ~~~~v~e~~~~~~l~~~~  100 (283)
T d1mqba_          83 PMMIITEYMENGALDKFL  100 (283)
T ss_dssp             SEEEEEECCTTEEHHHHH
T ss_pred             ceEEEEEecccCcchhhh
Confidence            999999999998875543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.0054  Score=43.39  Aligned_cols=34  Identities=24%  Similarity=0.340  Sum_probs=28.8

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCccc
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLAR  118 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~  118 (160)
                      .+++||||++++.++.+ ...+++||||.++++..
T Consensus        66 ~~l~H~nIv~~~g~~~~-~~~~lv~e~~~~~~l~~   99 (273)
T d1u46a_          66 HSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLD   99 (273)
T ss_dssp             HHCCCTTBCCEEEEECS-SSCEEEEECCTTCBHHH
T ss_pred             HhCCCCCEEEEEEEEee-cchheeeeeecCcchhh
Confidence            35789999999999975 56789999999988754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.0045  Score=44.33  Aligned_cols=36  Identities=25%  Similarity=0.603  Sum_probs=33.2

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .||||++++.++.+.+.++++||||.+|++..++..
T Consensus        77 ~HpnIv~~~~~~~~~~~~~~v~e~~~~g~l~~~i~~  112 (299)
T d1fgka_          77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQA  112 (299)
T ss_dssp             CCTTBCCEEEEECSSSSCEEEECCCTTCBHHHHHHT
T ss_pred             CCCeEEecccccccCCeEEEEEEccCCCcHHHHHHh
Confidence            799999999999999999999999999999877653

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.0029  Score=44.65  Aligned_cols=38  Identities=32%  Similarity=0.561  Sum_probs=30.8

Q ss_pred             hhcCCCceeEEeeee-ecCCeeEEEEEecCCCCccccee
Q psy11428         84 KELHHENVVELLHCK-ESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        84 ~~l~h~niv~~~~~~-~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      .++.||||+++++.+ +..+.++++|||+.+|++..+++
T Consensus        55 ~~l~HpnIv~~~g~~~~~~~~~~lv~ey~~~g~L~~~l~   93 (262)
T d1byga_          55 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR   93 (262)
T ss_dssp             TTCCCTTBCCEEEEECCC--CCEEEECCCTTEEHHHHHH
T ss_pred             HhCCCCCEeeEEEEEEecCCcEEEEEeccCCCCHHHHHH
Confidence            357899999999977 55677899999999999977664

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.0033  Score=44.91  Aligned_cols=38  Identities=29%  Similarity=0.592  Sum_probs=30.9

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      .+++|||||++++.+. .+.++++||||.+|++...+++
T Consensus        67 ~~l~h~nIv~~~g~~~-~~~~~lv~Ey~~~g~l~~~~~~  104 (285)
T d1fmka3          67 KKLRHEKLVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKG  104 (285)
T ss_dssp             HHCCCTTBCCEEEEEC-SSSCEEEECCCTTCBHHHHHSH
T ss_pred             HhcccCCEeEEEEEEe-cCCeEEEEEecCCCchhhhhhh
Confidence            3589999999999885 4568999999999988655443

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.0098  Score=41.91  Aligned_cols=86  Identities=23%  Similarity=0.206  Sum_probs=57.9

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.+|.. .-+.+|++.+..++..++.++.............+..    ++..+  ..+.|||+++++.++......++
T Consensus         6 ~i~~LG~G-~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~----E~~il--~~l~h~niv~~~~~~~~~~~~~i   78 (292)
T d1unla_           6 KLEKIGEG-TYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR----EICLL--KELKHKNIVRLHDVLHSDKKLTL   78 (292)
T ss_dssp             EEEEEEEC-SSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHH----HHHHH--TTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eeeEEecC-cCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHH----HHHHH--HhcCcCCEEeeccccccccceeE
Confidence            45555532 3368999998777766777765443333333322222    22222  35789999999999999999999


Q ss_pred             EEEecCCCCcccc
Q psy11428        107 VMEFCNGGDLARI  119 (160)
Q Consensus       107 ~~ey~~~~~l~~i  119 (160)
                      +++++.++.+..+
T Consensus        79 v~~~~~~~~l~~~   91 (292)
T d1unla_          79 VFEFCDQDLKKYF   91 (292)
T ss_dssp             EEECCSEEHHHHH
T ss_pred             Eeeeccccccccc
Confidence            9999998877443

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.39  E-value=0.00048  Score=49.00  Aligned_cols=85  Identities=24%  Similarity=0.121  Sum_probs=50.8

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHH----HHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDT----IRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ  102 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~  102 (160)
                      |.+.+|.. .-+.+|++.+..++..++.+...+.......    ...+. ..+..++.+   +..|||++++++++++.+
T Consensus         8 i~~~lG~G-~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~-~E~~il~~l---~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           8 VGPLLGSG-GFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP-MEVVLLKKV---SSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             EEEEEEEE-TTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEE-HHHHHHHHH---CSSSCSBCCEEEEEECSS
T ss_pred             EeEEEeeC-CCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHH-HHHHHHHHh---ccCCCCccEEEEEEeeCC
Confidence            44555533 2367898888777777777655432221100    00000 111122211   235999999999999999


Q ss_pred             eeEEEEEecCC-CCc
Q psy11428        103 HVYLVMEFCNG-GDL  116 (160)
Q Consensus       103 ~~~~~~ey~~~-~~l  116 (160)
                      ..+++|||+.+ +++
T Consensus        83 ~~~lv~e~~~~~~~l   97 (273)
T d1xwsa_          83 SFVLILERPEPVQDL   97 (273)
T ss_dssp             EEEEEEECCSSEEEH
T ss_pred             eEEEEEEeccCcchH
Confidence            99999999976 444

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.35  E-value=0.0013  Score=47.46  Aligned_cols=41  Identities=24%  Similarity=0.502  Sum_probs=33.6

Q ss_pred             hhhcCCCceeEEeeeeecCC----eeEEEEEecCCCCcccceecC
Q psy11428         83 VKELHHENVVELLHCKESDQ----HVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        83 ~~~l~h~niv~~~~~~~~~~----~~~~~~ey~~~~~l~~iih~d  123 (160)
                      ...++||||++++..+...+    .++++|||+.+|+|..++++.
T Consensus        51 ~~~~~HpnIv~~~~~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~   95 (303)
T d1vjya_          51 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY   95 (303)
T ss_dssp             STTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTTCBHHHHHHHC
T ss_pred             HhhCCCCcCcceEEEEEeCCCcceEEEEEEecccCCCHHHHHhcC
Confidence            34578999999999886544    589999999999998877653

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0056  Score=43.64  Aligned_cols=38  Identities=32%  Similarity=0.531  Sum_probs=31.3

Q ss_pred             cCCCceeEEeeeee-cCCeeEEEEEecCCCCcccceecC
Q psy11428         86 LHHENVVELLHCKE-SDQHVYLVMEFCNGGDLARIVHRD  123 (160)
Q Consensus        86 l~h~niv~~~~~~~-~~~~~~~~~ey~~~~~l~~iih~d  123 (160)
                      .+|||++.++..+. ....++++||||.+|+|..+++..
T Consensus        74 ~~h~~iv~~~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~  112 (299)
T d1ywna1          74 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSK  112 (299)
T ss_dssp             CCCTTBCCEEEEECSTTSCCEEEEECCTTCBHHHHHHHT
T ss_pred             cCCCeEEEeeeeeccCCCeEEEEEEecCCCcHHHHHHhc
Confidence            47999999988765 456799999999999998877643

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=96.10  E-value=0.02  Score=41.10  Aligned_cols=81  Identities=16%  Similarity=0.226  Sum_probs=50.0

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeee--cCCe
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKE--SDQH  103 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~--~~~~  103 (160)
                      +++.+|.. .-+.+|++.+...+..++.++.....     ...+.. .+..++     .+ .|||++++++.++  ....
T Consensus        39 i~~~LG~G-~fg~V~~a~~~~~~~~vAiK~i~~~~-----~~~~~~-Ei~il~-----~l~~hpnIv~~~~~~~~~~~~~  106 (328)
T d3bqca1          39 LVRKLGRG-KYSEVFEAINITNNEKVVVKILKPVK-----KKKIKR-EIKILE-----NLRGGPNIITLADIVKDPVSRT  106 (328)
T ss_dssp             EEEEEEEC-SSEEEEEEEETTTTEEEEEEEECSSC-----HHHHHH-HHHHHH-----HHTTSTTBCCEEEEEECTTTCS
T ss_pred             EEEEEecC-cCeEEEEEEECCCCCEEEEEEECHHH-----HHHHHH-HHHHHH-----hccCCCCCcEEEEEEEecCCCc
Confidence            44445432 33678888876666556665543221     111111 222222     34 5999999999987  4566


Q ss_pred             eEEEEEecCCCCcccc
Q psy11428        104 VYLVMEFCNGGDLARI  119 (160)
Q Consensus       104 ~~~~~ey~~~~~l~~i  119 (160)
                      ++++||||.+++|..+
T Consensus       107 ~~~v~e~~~~~~L~~~  122 (328)
T d3bqca1         107 PALVFEHVNNTDFKQL  122 (328)
T ss_dssp             EEEEEECCCSCBGGGT
T ss_pred             eeEEEeecCCCcHHHH
Confidence            9999999999998543

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.08  E-value=0.0046  Score=45.03  Aligned_cols=85  Identities=26%  Similarity=0.327  Sum_probs=49.6

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC----
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ----  102 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~----  102 (160)
                      +++.+|.. .-+.+|++.+...+..++.+........+.....+.    .++..+  ..+.|||+|++++.+...+    
T Consensus        22 ~i~~lG~G-~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~----~Ei~il--~~l~hpniv~l~~~~~~~~~~~~   94 (346)
T d1cm8a_          22 DLQPVGSG-AYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAY----RELRLL--KHMRHENVIGLLDVFTPDETLDD   94 (346)
T ss_dssp             EEEEC-------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHH----HHHHHH--HHCCBTTBCCCSEEECSCSSTTT
T ss_pred             EEEEEecC-CCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHH----HHHHHH--HhcCCCCeeEEEEEeccCccccc
Confidence            44544432 236789998877676677665544333333332222    222222  3578999999999987655    


Q ss_pred             --eeEEEEEecCCCCcccc
Q psy11428        103 --HVYLVMEFCNGGDLARI  119 (160)
Q Consensus       103 --~~~~~~ey~~~~~l~~i  119 (160)
                        .++++|||| +.++..+
T Consensus        95 ~~~~~lv~e~~-~~~l~~~  112 (346)
T d1cm8a_          95 FTDFYLVMPFM-GTDLGKL  112 (346)
T ss_dssp             CCCCEEEEECC-SEEHHHH
T ss_pred             cceEEEEEecc-cccHHHH
Confidence              479999999 4445433

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.01  E-value=0.0062  Score=43.53  Aligned_cols=39  Identities=26%  Similarity=0.443  Sum_probs=35.0

Q ss_pred             hhcCCCceeEEeeeeecCCeeEEEEEecCCCCcccceec
Q psy11428         84 KELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIVHR  122 (160)
Q Consensus        84 ~~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih~  122 (160)
                      ..+.|||+++++..+...+..+++|||+.+|+|..+++.
T Consensus        71 ~~l~h~niv~~~~~~~~~~~~~~v~e~~~~g~L~~~l~~  109 (301)
T d1lufa_          71 AEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRS  109 (301)
T ss_dssp             HTCCCTTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHH
T ss_pred             HhcCCCCcccceeeeccCCceEEEEEecCCCcHHHHHHh
Confidence            358899999999999999999999999999999877653

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0057  Score=44.43  Aligned_cols=80  Identities=23%  Similarity=0.184  Sum_probs=50.1

Q ss_pred             CCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecC-----CeeEEEEEec
Q psy11428         37 DQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESD-----QHVYLVMEFC  111 (160)
Q Consensus        37 ~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~-----~~~~~~~ey~  111 (160)
                      -+.+|++.+...+..++.+...+..........+.. .+..+     .++.|||+++++..+...     ...+++|+|+
T Consensus        31 fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~-Ei~il-----~~l~h~~iv~~~~~~~~~~~~~~~~~~~i~~~~  104 (348)
T d2gfsa1          31 YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL-----KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL  104 (348)
T ss_dssp             TSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHH-HHHHH-----HHCCCTTBCCCSEEECSCSSTTTCCCCEEEEEC
T ss_pred             CeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHH-HHHHH-----HhcCCCCeeeEEEEEeeccccccCceEEEEEee
Confidence            357888887766666666655443333333322222 22222     357899999999988633     3457778888


Q ss_pred             CCCCcccceec
Q psy11428        112 NGGDLARIVHR  122 (160)
Q Consensus       112 ~~~~l~~iih~  122 (160)
                      .|++|..++++
T Consensus       105 ~gg~L~~~~~~  115 (348)
T d2gfsa1         105 MGADLNNIVKC  115 (348)
T ss_dssp             CSEEHHHHHTT
T ss_pred             cCCchhhhccc
Confidence            99999776643

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=95.87  E-value=0.01  Score=41.95  Aligned_cols=85  Identities=19%  Similarity=0.198  Sum_probs=52.3

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      +++.+|.. .-+.+|++.+ ..+..++.+........+....    .+..++..+  .+++||||++++..+...+..++
T Consensus         6 ~~~~iG~G-~fg~Vy~~~~-~~~~~vAvK~i~~~~~~~~~~~----~~~~E~~il--~~l~hpnIv~~~~~~~~~~~~~i   77 (286)
T d1ob3a_           6 GLEKIGEG-TYGVVYKAQN-NYGETFALKKIRLEKEDEGIPS----TTIREISIL--KELKHSNIVKLYDVIHTKKRLVL   77 (286)
T ss_dssp             EEEEEEEE-TTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCH----HHHHHHHGG--GGCCCTTBCCEEEEEECSSCEEE
T ss_pred             eccEEecC-CCcEEEEEEe-CCCCEEEEEEEehhhcChHHHH----HHHHHHHHH--HhCCCCcEEeeeeecccCCceeE
Confidence            44555533 3367888876 3444555554432222211111    122233332  45889999999999999999999


Q ss_pred             EEEecCCCCcccc
Q psy11428        107 VMEFCNGGDLARI  119 (160)
Q Consensus       107 ~~ey~~~~~l~~i  119 (160)
                      +|+|+.++.+..+
T Consensus        78 ~~e~~~~~~~~~~   90 (286)
T d1ob3a_          78 VFEHLDQDLKKLL   90 (286)
T ss_dssp             EEECCSEEHHHHH
T ss_pred             EEEeehhhhHHHH
Confidence            9999998766433

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.011  Score=42.58  Aligned_cols=35  Identities=23%  Similarity=0.223  Sum_probs=28.4

Q ss_pred             hcCCCceeEEeeeeecCCeeEEEEEecCCCCcccce
Q psy11428         85 ELHHENVVELLHCKESDQHVYLVMEFCNGGDLARIV  120 (160)
Q Consensus        85 ~l~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~ii  120 (160)
                      +++|||||++++.+.+. ..+++|+|+.++++...+
T Consensus        67 ~l~HpnIv~l~g~~~~~-~~~~v~e~~~~~~l~~~~  101 (317)
T d1xkka_          67 SVDNPHVCRLLGICLTS-TVQLITQLMPFGCLLDYV  101 (317)
T ss_dssp             HCCCTTBCCEEEEEESS-SEEEEEECCTTCBHHHHH
T ss_pred             hCCCCCEeeEEEEEecC-CeeEEEEeccCCcccccc
Confidence            57899999999998764 567888999988875543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.44  E-value=0.032  Score=40.54  Aligned_cols=74  Identities=20%  Similarity=0.159  Sum_probs=46.4

Q ss_pred             EEEeeeeecCCcEEEEEEEeCCCceeEEEeeecC-CCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec------
Q psy11428         28 VELLHCKESDQHVYLVMEFCNGGDLADYLVSKGT-LSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES------  100 (160)
Q Consensus        28 v~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~------  100 (160)
                      ++++|.. .-+.+|++.+...+.-++.+...... ....        .+..+     .++.|||++++++.+..      
T Consensus        25 ~k~LG~G-~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~--------Ei~il-----~~l~h~niv~~~~~~~~~~~~~~   90 (350)
T d1q5ka_          25 TKVIGNG-SFGVVYQAKLCDSGELVAIKKVLQDKRFKNR--------ELQIM-----RKLDHCNIVRLRYFFYSSGEKKD   90 (350)
T ss_dssp             EEEEEEE-TTEEEEEEEETTTCCEEEEEEEECCSSSCCH--------HHHHH-----HHCCCTTBCCEEEEEEEC--CCS
T ss_pred             eeEEeeC-cCeEEEEEEECCCCCEEEEEEECccchHHHH--------HHHHH-----HhcCCCCCCcEEEEEEecCccCC
Confidence            3444432 34679999887777667666544322 1111        11222     24789999999988843      


Q ss_pred             CCeeEEEEEecCCCC
Q psy11428        101 DQHVYLVMEFCNGGD  115 (160)
Q Consensus       101 ~~~~~~~~ey~~~~~  115 (160)
                      ...++++||||.++.
T Consensus        91 ~~~~~lv~Ey~~~~~  105 (350)
T d1q5ka_          91 EVYLNLVLDYVPETV  105 (350)
T ss_dssp             CCEEEEEEECCSEEH
T ss_pred             ceEEEEEEeccCCcc
Confidence            334789999998764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.99  E-value=0.017  Score=40.95  Aligned_cols=87  Identities=22%  Similarity=0.240  Sum_probs=48.9

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCc-eeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeee-----
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGD-LADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKE-----   99 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~-l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~-----   99 (160)
                      .+++.+|.. .-+.+|++.+.-.++. ++.+........+........+ +..++.  .....|||++++++.+.     
T Consensus        10 ~i~~~LG~G-~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E-~~~l~~--l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_          10 ECVAEIGEG-AYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIRE-VAVLRH--LETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             EEEEEEEEE-TTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHH-HHHHHH--HHHTCCTTBCCEEEEEEEEECS
T ss_pred             EEEEEEecc-cCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHH-HHHHHH--HhhcCCCCcceeeeeecccccc
Confidence            355555533 3367899887666554 4555433222111111111111 122222  12468999999998874     


Q ss_pred             cCCeeEEEEEecCCCCc
Q psy11428        100 SDQHVYLVMEFCNGGDL  116 (160)
Q Consensus       100 ~~~~~~~~~ey~~~~~l  116 (160)
                      ....++++|||+.++.+
T Consensus        86 ~~~~~~~~~e~~~~~~~  102 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLT  102 (305)
T ss_dssp             SEEEEEEEEECCSCBHH
T ss_pred             cCceEEEEEEeccCCch
Confidence            34568999999998765

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.51  E-value=0.05  Score=39.35  Aligned_cols=87  Identities=14%  Similarity=0.121  Sum_probs=50.8

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCC---
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQ---  102 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~---  102 (160)
                      .+++.+|.... +.+|++.+...+..++.+...... .......+.    .++..+  ..++|||+++++..+....   
T Consensus        11 ~~~~~LG~G~f-g~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~----~Ei~il--~~l~hp~iv~~~~~~~~~~~~~   82 (345)
T d1pmea_          11 TNLSYIGEGAY-GMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTL----REIKIL--LRFRHENIIGINDIIRAPTIEQ   82 (345)
T ss_dssp             EEEEECC---C-CCEEEEEETTTCSEEEEEEECCTT-CHHHHHHHH----HHHHHH--HHCCCTTBCCCCEEECCSSTTT
T ss_pred             EEEEEEeeccC-eEEEEEEECCCCcEEEEEEEehhc-ChHHHHHHH----HHHHHH--HHcCCCCCCcEEEEEeeccccc
Confidence            35555554333 579999987777777766543322 122222221    222222  3588999999998886543   


Q ss_pred             -eeEEEEEecCCCCcccce
Q psy11428        103 -HVYLVMEFCNGGDLARIV  120 (160)
Q Consensus       103 -~~~~~~ey~~~~~l~~ii  120 (160)
                       ..+.+|+|+.|++|..++
T Consensus        83 ~~~~~l~~~~~~g~L~~~l  101 (345)
T d1pmea_          83 MKDVYLVTHLMGADLYKLL  101 (345)
T ss_dssp             CCCEEEEEECCCEEHHHHH
T ss_pred             cceEEEEEeecCCchhhhh
Confidence             235556677788887665

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.43  E-value=0.043  Score=39.08  Aligned_cols=84  Identities=23%  Similarity=0.258  Sum_probs=48.2

Q ss_pred             ceEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeec-----
Q psy11428         26 NVVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKES-----  100 (160)
Q Consensus        26 ~iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~-----  100 (160)
                      .+++.+|... -+.+|++.+...+..++.++.......+.....+..+ +..+     ..+.|||+++++..+..     
T Consensus        13 ~i~~~LG~G~-fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E-~~il-----~~l~h~nii~~~~~~~~~~~~~   85 (318)
T d3blha1          13 EKLAKIGQGT-FGEVFKARHRKTGQKVALKKVLMENEKEGFPITALRE-IKIL-----QLLKHENVVNLIEICRTKASPY   85 (318)
T ss_dssp             EEEEEEEECS-SSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHH-HHHH-----HHCCCTTBCCEEEEEEC-----
T ss_pred             EEEEEEecCc-CeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHH-HHHH-----HHhcCCCccceEeeeecccccc
Confidence            3555555432 3678999887666666666543322222211212221 2222     25789999999988755     


Q ss_pred             ---CCeeEEEEEecCCCCc
Q psy11428        101 ---DQHVYLVMEFCNGGDL  116 (160)
Q Consensus       101 ---~~~~~~~~ey~~~~~l  116 (160)
                         .+.++++||||.++.+
T Consensus        86 ~~~~~~~~iv~e~~~~~~~  104 (318)
T d3blha1          86 NRCKGSIYLVFDFCEHDLA  104 (318)
T ss_dssp             -----CEEEEEECCCEEHH
T ss_pred             cccCceEEEEEeccCCCcc
Confidence               3458999999987765

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.52  E-value=0.014  Score=42.24  Aligned_cols=35  Identities=20%  Similarity=0.410  Sum_probs=31.1

Q ss_pred             CCCceeEEeeeeecCCeeEEEEEecCCCCccccee
Q psy11428         87 HHENVVELLHCKESDQHVYLVMEFCNGGDLARIVH  121 (160)
Q Consensus        87 ~h~niv~~~~~~~~~~~~~~~~ey~~~~~l~~iih  121 (160)
                      +||||++++..++....++++|||+.+++|...+.
T Consensus        87 h~pnIv~~~~~~~~~~~~~~v~e~~~~~~L~~~i~  121 (322)
T d1vzoa_          87 QSPFLVTLHYAFQTETKLHLILDYINGGELFTHLS  121 (322)
T ss_dssp             TCTTBCCEEEEEEETTEEEEEECCCCSCBHHHHHH
T ss_pred             CCCeEEEeeeeeccCCceeeeeecccccHHHHHHH
Confidence            45899999999999999999999999999965543

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=90.65  E-value=0.58  Score=32.58  Aligned_cols=84  Identities=13%  Similarity=0.138  Sum_probs=50.5

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhcCCCceeEEeeeeecCCeeEE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKELHHENVVELLHCKESDQHVYL  106 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~~~~~~~~~~~~~  106 (160)
                      |.+.+|.- .-+.+|++.+...|..++.++......... ..    .....++.+    -+++|++.++.........++
T Consensus         9 i~~~iG~G-~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~-~~----~e~~~~~~l----~~~~~i~~~~~~~~~~~~~~~   78 (293)
T d1csna_           9 VGRRIGEG-SFGVIFEGTNLLNNQQVAIKFEPRRSDAPQ-LR----DEYRTYKLL----AGCTGIPNVYYFGQEGLHNVL   78 (293)
T ss_dssp             EEEEEEEC-SSCEEEEEEETTTTEEEEEEEEECCTTSCC-HH----HHHHHHHHT----TTCTTCCCEEEEEEETTEEEE
T ss_pred             EEEEEecC-CCeEEEEEEECCCCCEEEEEEEccccCcHH-HH----HHHHHHHHh----cCCCCCCEEEEEeecCCccEE
Confidence            44555433 236789998766666666665443322111 11    111222221    145889999999999999999


Q ss_pred             EEEecCCCCccccee
Q psy11428        107 VMEFCNGGDLARIVH  121 (160)
Q Consensus       107 ~~ey~~~~~l~~iih  121 (160)
                      +|||+ ++++..++.
T Consensus        79 vme~~-~~~l~~~~~   92 (293)
T d1csna_          79 VIDLL-GPSLEDLLD   92 (293)
T ss_dssp             EEECC-CCBHHHHHH
T ss_pred             EEEec-CCCHHHHHH
Confidence            99999 566655443

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.96  E-value=0.068  Score=37.83  Aligned_cols=29  Identities=28%  Similarity=0.386  Sum_probs=23.5

Q ss_pred             cceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428        118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus       118 ~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      ++||+|+.+.|++++.+          ...-+.||+.+.
T Consensus       184 giIHgDl~~dNvl~~~~----------~v~gvIDF~~~~  212 (316)
T d2ppqa1         184 GVIHADLFQDNVFFLGD----------ELSGLIDFYFAC  212 (316)
T ss_dssp             EEECSCCCGGGEEEETT----------EEEEECCCTTCE
T ss_pred             ccccCCcchhhhhcccc----------cceeEecccccc
Confidence            68999999999999843          245799998774

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=87.26  E-value=0.18  Score=34.27  Aligned_cols=42  Identities=19%  Similarity=0.136  Sum_probs=28.0

Q ss_pred             HHHHHHHHhhcC-CcceEEEeeeeecCCcEEEEEEEeCCCcee
Q psy11428         12 TRHILKELTELH-HENVVELLHCKESDQHVYLVMEFCNGGDLA   53 (160)
Q Consensus        12 ~~~~~~~l~~l~-h~~iv~l~~~~~~~~~~~lv~e~~~~g~l~   53 (160)
                      ...|.+.+..+. +-.+.+++.....++..++++++.+|..+.
T Consensus        56 ~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~   98 (263)
T d1j7la_          56 VEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS   98 (263)
T ss_dssp             HHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred             HHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEeccccccc
Confidence            344555554443 334566777777788899999999887664

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=86.63  E-value=0.16  Score=34.39  Aligned_cols=41  Identities=17%  Similarity=0.170  Sum_probs=27.7

Q ss_pred             HHHHHHHhhcCC--cceEEEeeeeecCCcEEEEEEEeCCCcee
Q psy11428         13 RHILKELTELHH--ENVVELLHCKESDQHVYLVMEFCNGGDLA   53 (160)
Q Consensus        13 ~~~~~~l~~l~h--~~iv~l~~~~~~~~~~~lv~e~~~~g~l~   53 (160)
                      +.|.+.++.+..  -.+.+++....+++..++++++++|.++.
T Consensus        52 ~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~~~~   94 (255)
T d1nd4a_          52 QDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL   94 (255)
T ss_dssp             HHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred             HHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeeccccc
Confidence            445555554432  23566777777888899999999886653

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=85.98  E-value=0.15  Score=37.43  Aligned_cols=28  Identities=32%  Similarity=0.464  Sum_probs=22.9

Q ss_pred             cceecCCCCCCeeeecCCCCCCCCCCCceEEEeeeeccc
Q psy11428        118 RIVHRDLKPQNILLSHSFGKQYPQPQHIKLKIADFGFAR  156 (160)
Q Consensus       118 ~iih~dlk~~nvl~~~~~~~~~~~~~~~~~~l~dfg~a~  156 (160)
                      .++|+|+.|.|++++.+           .++++||.++.
T Consensus       224 ~LiHGDl~~gNIlv~~~-----------~~~vID~E~a~  251 (392)
T d2pula1         224 TLIHGDLHTGSIFASEH-----------ETKVIDPEFAF  251 (392)
T ss_dssp             EEECSCCCGGGEEECSS-----------CEEECCCTTCE
T ss_pred             ceeccCCcCCceeEcCC-----------ceEEechhhcc
Confidence            47999999999999743           47899997764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=85.23  E-value=1.5  Score=30.29  Aligned_cols=78  Identities=15%  Similarity=0.118  Sum_probs=44.7

Q ss_pred             eEEEeeeeecCCcEEEEEEEeCCCceeEEEeeecCCCHHHHHHHHHHHHHHHHHhhhhhc-CCCceeEEeeeeecCCeeE
Q psy11428         27 VVELLHCKESDQHVYLVMEFCNGGDLADYLVSKGTLSEDTIRIFLKQIVQALKAFQVKEL-HHENVVELLHCKESDQHVY  105 (160)
Q Consensus        27 iv~l~~~~~~~~~~~lv~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~h~niv~~~~~~~~~~~~~  105 (160)
                      +.+.+|.- .-+.+|++.+...+..++.++..........     ......++     .+ +|++++.+.......+..+
T Consensus        11 l~~~iG~G-~fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~-----~~E~~i~~-----~l~~~~~i~~~~~~~~~~~~~~   79 (299)
T d1ckia_          11 LGRKIGSG-SFGDIYLGTDIAAGEEVAIKLECVKTKHPQL-----HIESKIYK-----MMQGGVGIPTIRWCGAEGDYNV   79 (299)
T ss_dssp             EEEEEEEC-SSSEEEEEEETTTTEEEEEEEEESCTTSCCH-----HHHHHHHH-----HSTTSTTCCCEEEEEEETTEEE
T ss_pred             EeEEEeeC-CCcEEEEEEECCCCCEEEEEEEchhccCHHH-----HHHHHHHH-----HccCCCcccEEEEEEecCCEEE
Confidence            44444432 3367899887666666666654432221111     11112222     34 3555666677778889999


Q ss_pred             EEEEecCCCC
Q psy11428        106 LVMEFCNGGD  115 (160)
Q Consensus       106 ~~~ey~~~~~  115 (160)
                      ++|||+.++.
T Consensus        80 ivme~~~~~l   89 (299)
T d1ckia_          80 MVMELLGPSL   89 (299)
T ss_dssp             EEEECCCCBH
T ss_pred             EEEEEcCCch
Confidence            9999996643