BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11430
(181 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P42124|EZ_DROME Histone-lysine N-methyltransferase E(z) OS=Drosophila melanogaster
GN=E(z) PE=1 SV=2
Length = 760
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 115/183 (62%), Gaps = 12/183 (6%)
Query: 2 VKVSKEWKKRVRSSYCKIRQKRRHIRAEDIKGTWNNNLKNMTQILGDEKIKRIKSKAVWV 61
KV EWK+RV+S Y KIRQ++R+ RA++IK W N + D + VW
Sbjct: 4 TKVPPEWKRRVKSEYIKIRQQKRYKRADEIKEAWIRNWDEHNHNVQDLYCE----SKVWQ 59
Query: 62 CASVSQQDTAYMKKASAIRLDS----TQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVE 117
+K+A + Q+V PI INAV PIPTMYTWAP QQNFMVE
Sbjct: 60 AKPYDPPHVDCVKRAEVTSYNGIPSGPQKV---PICVINAVTPIPTMYTWAPTQQNFMVE 116
Query: 118 DETVLHNIPYMGDEILEKDTSFIEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKYQ 177
DETVLHNIPYMGDE+L+KD FIEEL+KNYDGKVHG+ + F+DD IF+ELV+ L++
Sbjct: 117 DETVLHNIPYMGDEVLDKDGKFIEELIKNYDGKVHGDKDPS-FMDDAIFVELVHALMRSY 175
Query: 178 VKD 180
K+
Sbjct: 176 SKE 178
>sp|Q4R381|EZH2_MACFA Histone-lysine N-methyltransferase EZH2 OS=Macaca fascicularis
GN=EZH2 PE=2 SV=1
Length = 746
Score = 159 bits (403), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 121/173 (69%), Gaps = 10/173 (5%)
Query: 8 WKKRVRSSYCKIRQKRRHIRAEDIKGTWNNNLKNM---TQILGDE-KIKRIKSKAVWVCA 63
W+KRV+S Y ++RQ +R RA+++K +++N + + T+IL E K +RI+ V +
Sbjct: 15 WRKRVKSEYMRLRQLKRFRRADEVKSMFSSNRQKILERTEILNQEWKQRRIQ--PVHILT 72
Query: 64 SVSQQDTAYMKKASAIRLDSTQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVEDETVLH 123
SVS + + ++ D P+ ++NAV +P MY+W+P+QQNFMVEDETVLH
Sbjct: 73 SVS---SLRGTRECSVTSDLDFPTQVIPLKTLNAVASVPIMYSWSPLQQNFMVEDETVLH 129
Query: 124 NIPYMGDEILEKDTSFIEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKY 176
NIPYMGDE+L++D +FIEEL+KNYDGKVHG+ GF++D+IF+ELVN L +Y
Sbjct: 130 NIPYMGDEVLDQDGTFIEELIKNYDGKVHGDR-ECGFINDEIFVELVNALGQY 181
>sp|Q15910|EZH2_HUMAN Histone-lysine N-methyltransferase EZH2 OS=Homo sapiens GN=EZH2
PE=1 SV=2
Length = 746
Score = 159 bits (403), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 121/173 (69%), Gaps = 10/173 (5%)
Query: 8 WKKRVRSSYCKIRQKRRHIRAEDIKGTWNNNLKNM---TQILGDE-KIKRIKSKAVWVCA 63
W+KRV+S Y ++RQ +R RA+++K +++N + + T+IL E K +RI+ V +
Sbjct: 15 WRKRVKSEYMRLRQLKRFRRADEVKSMFSSNRQKILERTEILNQEWKQRRIQ--PVHILT 72
Query: 64 SVSQQDTAYMKKASAIRLDSTQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVEDETVLH 123
SVS + + ++ D P+ ++NAV +P MY+W+P+QQNFMVEDETVLH
Sbjct: 73 SVS---SLRGTRECSVTSDLDFPTQVIPLKTLNAVASVPIMYSWSPLQQNFMVEDETVLH 129
Query: 124 NIPYMGDEILEKDTSFIEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKY 176
NIPYMGDE+L++D +FIEEL+KNYDGKVHG+ GF++D+IF+ELVN L +Y
Sbjct: 130 NIPYMGDEVLDQDGTFIEELIKNYDGKVHGDR-ECGFINDEIFVELVNALGQY 181
>sp|Q08BS4|EZH2_DANRE Histone-lysine N-methyltransferase EZH2 OS=Danio rerio GN=ezh2 PE=2
SV=1
Length = 760
Score = 159 bits (402), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 120/173 (69%), Gaps = 9/173 (5%)
Query: 8 WKKRVRSSYCKIRQKRRHIRAEDIKGTWNNNLKNM---TQILGDE-KIKRIKSKAVWVCA 63
W++RV+S Y ++RQ +R RA+++K +++N + + T IL E K++RI+ +
Sbjct: 15 WRRRVKSEYMRLRQLKRFRRADEVKSMFSSNRQKILERTDILNQEWKLRRIQPVHIMTPV 74
Query: 64 SVSQQDTAYMKKASAIRLDSTQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVEDETVLH 123
S S + T S S Q + P+ ++NAV +P MY+W+P+QQNFMVEDETVLH
Sbjct: 75 S-SLRGTRECTVDSGFSEFSRQVI---PLKTLNAVASVPVMYSWSPLQQNFMVEDETVLH 130
Query: 124 NIPYMGDEILEKDTSFIEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKY 176
NIPYMGDEIL++D +FIEEL+KNYDGKVHG+ GF++D+IF+ELVN L +Y
Sbjct: 131 NIPYMGDEILDQDGTFIEELIKNYDGKVHGDR-ECGFINDEIFVELVNALNQY 182
>sp|Q28D84|EZH2_XENTR Histone-lysine N-methyltransferase EZH2 OS=Xenopus tropicalis
GN=ezh2 PE=2 SV=1
Length = 748
Score = 159 bits (402), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/173 (48%), Positives = 120/173 (69%), Gaps = 10/173 (5%)
Query: 8 WKKRVRSSYCKIRQKRRHIRAEDIKGTWNNNLKNM---TQILGDE-KIKRIKSKAVWVCA 63
W+KRV+S Y ++RQ +R RA+++K +N N + + T+IL E K +RI+ +
Sbjct: 15 WRKRVKSEYMRLRQLKRFRRADEVKSMFNTNRQKIMERTEILNQEWKQRRIQPVHIMTTV 74
Query: 64 SVSQQDTAYMKKASAIRLDSTQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVEDETVLH 123
S S + T S LD ++V P+ ++ AV +P MY+W+P+QQNFMVEDETVLH
Sbjct: 75 S-SLRGTRECSVTSD--LDFPKQVI--PLKTLTAVASVPIMYSWSPLQQNFMVEDETVLH 129
Query: 124 NIPYMGDEILEKDTSFIEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKY 176
NIPYMGDE+L++D +FIEEL+KNYDGKVHG+ GF++D+IF+ELVN L +Y
Sbjct: 130 NIPYMGDEVLDQDGTFIEELIKNYDGKVHGDR-ECGFINDEIFVELVNALAQY 181
>sp|Q4V863|EZH2B_XENLA Histone-lysine N-methyltransferase EZH2 OS=Xenopus laevis GN=ezh2-b
PE=2 SV=1
Length = 748
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 118/173 (68%), Gaps = 10/173 (5%)
Query: 8 WKKRVRSSYCKIRQKRRHIRAEDIKGTWNNNLKNM---TQILGDE-KIKRIKSKAVWVCA 63
W+KRV+S Y ++RQ +R RA+++K +N N + + T+IL E K +RI+ +
Sbjct: 15 WRKRVKSEYMRLRQLKRFRRADEVKSMFNTNRQKIMERTEILNQEWKQRRIQPVHIMTTV 74
Query: 64 SVSQQDTAYMKKASAIRLDSTQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVEDETVLH 123
S + + LD ++V P+ ++ AV +P MY+W+P+QQNFMVEDETVLH
Sbjct: 75 SSLRGTRECFVTSD---LDFPKQVI--PLKTLTAVASMPIMYSWSPLQQNFMVEDETVLH 129
Query: 124 NIPYMGDEILEKDTSFIEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKY 176
NIPYMGDE+L++D +FIEEL+KNYDGKVHG+ GF++D+IF+ELVN L +Y
Sbjct: 130 NIPYMGDEVLDQDGTFIEELIKNYDGKVHGDR-ECGFINDEIFVELVNALAQY 181
>sp|Q61188|EZH2_MOUSE Histone-lysine N-methyltransferase EZH2 OS=Mus musculus GN=Ezh2
PE=1 SV=2
Length = 746
Score = 157 bits (397), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 120/173 (69%), Gaps = 10/173 (5%)
Query: 8 WKKRVRSSYCKIRQKRRHIRAEDIKGTWNNNLKNM---TQILGDE-KIKRIKSKAVWVCA 63
W+KRV+S Y ++RQ +R RA+++K +++N + + T+ L E K +RI+ V +
Sbjct: 15 WRKRVKSEYMRLRQLKRFRRADEVKTMFSSNRQKILERTETLNQEWKQRRIQ--PVHIMT 72
Query: 64 SVSQQDTAYMKKASAIRLDSTQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVEDETVLH 123
SVS + + ++ D P+ ++NAV +P MY+W+P+QQNFMVEDETVLH
Sbjct: 73 SVS---SLRGTRECSVTSDLDFPAQVIPLKTLNAVASVPIMYSWSPLQQNFMVEDETVLH 129
Query: 124 NIPYMGDEILEKDTSFIEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKY 176
NIPYMGDE+L++D +FIEEL+KNYDGKVHG+ GF++D+IF+ELVN L +Y
Sbjct: 130 NIPYMGDEVLDQDGTFIEELIKNYDGKVHGDR-ECGFINDEIFVELVNALGQY 181
>sp|Q98SM3|EZH2A_XENLA Histone-lysine N-methyltransferase EZH2 OS=Xenopus laevis GN=ezh2-a
PE=2 SV=1
Length = 748
Score = 156 bits (395), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 119/173 (68%), Gaps = 10/173 (5%)
Query: 8 WKKRVRSSYCKIRQKRRHIRAEDIKGTWNNNLKNM---TQILGDE-KIKRIKSKAVWVCA 63
W+KRV+S Y +RQ ++ RA+++K +N N + + T+IL E K +RI+ +
Sbjct: 15 WRKRVKSEYMALRQLKKFRRADEVKSMFNTNRQKIMERTEILNQEWKQRRIQPVHIMTTV 74
Query: 64 SVSQQDTAYMKKASAIRLDSTQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVEDETVLH 123
S S + T S LD ++V P+ ++ AV +P MY+W+P+QQNFMVEDETVLH
Sbjct: 75 S-SLRGTRECSVTSD--LDFPKQVI--PLKTLTAVASVPIMYSWSPLQQNFMVEDETVLH 129
Query: 124 NIPYMGDEILEKDTSFIEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKY 176
NIPYMGDE+L++D +FIEEL+KNYDGKVHG+ GF++D+IF+ELVN L +Y
Sbjct: 130 NIPYMGDEVLDQDGTFIEELIKNYDGKVHGDR-ECGFINDEIFVELVNALAQY 181
>sp|A7E2Z2|EZH1_BOVIN Histone-lysine N-methyltransferase EZH1 OS=Bos taurus GN=EZH1 PE=2
SV=2
Length = 747
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 110/180 (61%), Gaps = 11/180 (6%)
Query: 8 WKKRVRSSYCKIRQKRRHIRAEDIKGTWNNNLKNM---TQILGDEKIKRIKSKAVWVCAS 64
WK++V+S Y ++RQ +R K + N + TQIL +E+ K+++ + V +
Sbjct: 15 WKRKVKSEYMRLRQLKRLQANMGAKALYVANFAKVQEKTQIL-NEEWKKLRVQPVQLMKP 73
Query: 65 VSQQDTAYMKKASAIRLDSTQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVEDETVLHN 124
VS ++KK + + + S+N V +P MY+W+P+QQNFMVEDETVL N
Sbjct: 74 VSGH--PFLKKCTIESIFPGFASQHMLMRSLNTVALVPIMYSWSPLQQNFMVEDETVLCN 131
Query: 125 IPYMGDEILEKDTSFIEELLKNYDGKVHGE----TGSAGFLDDQIFIELVNDLIKYQVKD 180
IPYMGDE+ E+D +FIEEL+ NYDGKVHGE GS + D +F+ELV+ L +Y +D
Sbjct: 132 IPYMGDEVKEEDETFIEELINNYDGKVHGEEEMIPGSV-LISDAVFLELVDALNQYSDED 190
>sp|P70351|EZH1_MOUSE Histone-lysine N-methyltransferase EZH1 OS=Mus musculus GN=Ezh1
PE=1 SV=1
Length = 747
Score = 127 bits (320), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 108/176 (61%), Gaps = 11/176 (6%)
Query: 8 WKKRVRSSYCKIRQKRRHIRAEDIKGTWNNNLKNM---TQILGDEKIKRIKSKAVWVCAS 64
WK++V+S Y ++RQ +R K + N + TQIL +E+ K+++ + V
Sbjct: 15 WKRKVKSEYMRLRQLKRLQANMGAKALYVANFAKVQEKTQIL-NEEWKKLRVQPVQPMKP 73
Query: 65 VSQQDTAYMKKASAIRLDSTQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVEDETVLHN 124
VS ++KK + + + + S+N V +P MY+W+P+QQNFMVEDETVL N
Sbjct: 74 VSGH--PFLKKCTIESIFPGFDSQDMLMRSLNTVALVPIMYSWSPLQQNFMVEDETVLCN 131
Query: 125 IPYMGDEILEKDTSFIEELLKNYDGKVHGE----TGSAGFLDDQIFIELVNDLIKY 176
IPYMGDE+ E+D +FIEEL+ NYDGKVHGE GS + D +F+ELV+ L +Y
Sbjct: 132 IPYMGDEVKEEDETFIEELINNYDGKVHGEEEMIPGSV-LISDAVFLELVDALNQY 186
>sp|Q92800|EZH1_HUMAN Histone-lysine N-methyltransferase EZH1 OS=Homo sapiens GN=EZH1
PE=1 SV=2
Length = 747
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 107/176 (60%), Gaps = 11/176 (6%)
Query: 8 WKKRVRSSYCKIRQKRRHIRAEDIKGTWNNNLKNM---TQILGDEKIKRIKSKAVWVCAS 64
WK++V+S Y ++RQ +R K + N + TQIL +E+ K+++ + V
Sbjct: 15 WKRKVKSEYMRLRQLKRLQANMGAKALYVANFAKVQEKTQIL-NEEWKKLRVQPVQSMKP 73
Query: 65 VSQQDTAYMKKASAIRLDSTQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVEDETVLHN 124
VS ++KK + + + S+N V +P MY+W+P+QQNFMVEDETVL N
Sbjct: 74 VSGH--PFLKKCTIESIFPGFASQHMLMRSLNTVALVPIMYSWSPLQQNFMVEDETVLCN 131
Query: 125 IPYMGDEILEKDTSFIEELLKNYDGKVHGE----TGSAGFLDDQIFIELVNDLIKY 176
IPYMGDE+ E+D +FIEEL+ NYDGKVHGE GS + D +F+ELV+ L +Y
Sbjct: 132 IPYMGDEVKEEDETFIEELINNYDGKVHGEEEMIPGSV-LISDAVFLELVDALNQY 186
>sp|Q5RDS6|EZH1_PONAB Histone-lysine N-methyltransferase EZH1 OS=Pongo abelii GN=EZH1
PE=2 SV=1
Length = 747
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 106/176 (60%), Gaps = 11/176 (6%)
Query: 8 WKKRVRSSYCKIRQKRRHIRAEDIKGTWNNNLKNM---TQILGDEKIKRIKSKAVWVCAS 64
WK++V+S Y ++RQ +R K + N + TQIL +E+ K+++ + V
Sbjct: 15 WKRKVKSEYMRLRQLKRLQANMGAKALYVANFAKVQEKTQIL-NEEWKKLRVQPVQSMKP 73
Query: 65 VSQQDTAYMKKASAIRLDSTQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVEDETVLHN 124
V ++KK + + + S+N V +P MY+W+P+QQNFMVEDETVL N
Sbjct: 74 VCGH--PFLKKCTIESIFPGFASQHMLMRSLNTVALVPIMYSWSPLQQNFMVEDETVLCN 131
Query: 125 IPYMGDEILEKDTSFIEELLKNYDGKVHGE----TGSAGFLDDQIFIELVNDLIKY 176
IPYMGDE+ E+D +FIEEL+ NYDGKVHGE GS + D +F+ELV+ L +Y
Sbjct: 132 IPYMGDEVKEEDETFIEELINNYDGKVHGEEEMIPGSV-LISDAVFLELVDALNQY 186
>sp|O17514|MES2_CAEEL Histone-lysine N-methyltransferase mes-2 OS=Caenorhabditis elegans
GN=mes-2 PE=1 SV=2
Length = 773
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 91 PINSINAVNPIPTMYTWAPIQQNFMVEDETVLHNIPYMGDEILEKDTSFIEELLKNYDGK 150
P + I + P M W PI+Q+ D+ L ++PY GD I D + E L+ +
Sbjct: 160 PCSRIEVGDISPPMIYWVPIEQSVATPDQLRLTHMPYFGDGI--DDGNIYEHLIDMFPDG 217
Query: 151 VHGETGSAGFLDDQIFIELVNDLIK-YQ 177
+HG + + +++D I +L +K YQ
Sbjct: 218 IHGFSDNWSYVNDWILYKLCRAALKDYQ 245
>sp|A6UQC1|COBB_METVS Probable cobyrinic acid A,C-diamide synthase OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=cobB
PE=3 SV=1
Length = 447
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Query: 107 WAPIQQNFMVEDETVLH---NIPYMGDEILEKDTSFIEELLKNYDGKVHGETGSAGFLDD 163
++PI +F + + +L+ P + + L K+TS IE + +N+DGK++GE G +L +
Sbjct: 282 FSPIH-DFEIPNCDILYLGGGYPEIFSKELSKNTSMIESI-RNFDGKIYGECGGLMYLTN 339
Query: 164 QI 165
I
Sbjct: 340 SI 341
>sp|Q12018|CDC53_YEAST Cell division control protein 53 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC53 PE=1 SV=1
Length = 815
Score = 32.7 bits (73), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 27 RAEDIKGTWNNNLKNMTQILGDEKIKRIKSKAVWVCASVSQQDTAYMKKASAI 79
R++D++ TWN + QILG+EK + SK V+ S T YM+ +AI
Sbjct: 7 RSDDLEATWNFIEPGINQILGNEKNQASTSKRVYKILS----PTMYMEVYTAI 55
>sp|Q1BHL9|SYE_BURCA Glutamate--tRNA ligase OS=Burkholderia cenocepacia (strain AU 1054)
GN=gltX PE=3 SV=1
Length = 469
Score = 32.0 bits (71), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 11/139 (7%)
Query: 35 WNNNLKNMTQI----LGDEKIKRIKSKAVW-VCASVSQQDTAYMKKASAIRLDSTQEVTS 89
W++ +K +I L D I R ++ C V D M IR D T
Sbjct: 158 WDDAVKGRVEISNEELDDLVIARPDGTPIYNFCVVVDDMD---MGITHVIRGDDHVNNTP 214
Query: 90 CPINSINAVNPIPTMYTWAPIQQNFMVEDETVLHNIPYMGDEILEKDTSFIEELLKNYDG 149
IN +NA+ P +Y P N E + H + + +D F+ E + NY
Sbjct: 215 RQINILNALGGEPPVYAHLPTVLNEQGEKMSKRHGAMSV---MAYRDAGFLPEAVVNYLA 271
Query: 150 KVHGETGSAGFLDDQIFIE 168
++ G A + F+E
Sbjct: 272 RLGWSHGDAEIFSREQFVE 290
>sp|A0K8I0|SYE_BURCH Glutamate--tRNA ligase OS=Burkholderia cenocepacia (strain HI2424)
GN=gltX PE=3 SV=1
Length = 469
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 11/139 (7%)
Query: 35 WNNNLKNMTQI----LGDEKIKRIKSKAVW-VCASVSQQDTAYMKKASAIRLDSTQEVTS 89
W++ +K +I L D I R ++ C V D M IR D T
Sbjct: 158 WDDAVKGRVEISNEELDDLVIARPDGTPIYNFCVVVDDMD---MGITHVIRGDDHVNNTP 214
Query: 90 CPINSINAVNPIPTMYTWAPIQQNFMVEDETVLHNIPYMGDEILEKDTSFIEELLKNYDG 149
IN +NA+ P +Y P N E + H + + +D F+ E + NY
Sbjct: 215 RQINILNALGGEPPVYAHLPTVLNEQGEKMSKRHGAMSV---MAYRDAGFLPEAVVNYLA 271
Query: 150 KVHGETGSAGFLDDQIFIE 168
++ G A + F+E
Sbjct: 272 RLGWSHGDAEIFSREQFVE 290
>sp|B1JUI6|SYE_BURCC Glutamate--tRNA ligase OS=Burkholderia cenocepacia (strain MC0-3)
GN=gltX PE=3 SV=1
Length = 469
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 11/139 (7%)
Query: 35 WNNNLKNMTQI----LGDEKIKRIKSKAVW-VCASVSQQDTAYMKKASAIRLDSTQEVTS 89
W++ +K +I L D I R ++ C V D M IR D T
Sbjct: 158 WDDAVKGRVEISNEELDDLVIARPDGTPIYNFCVVVDDMD---MGITHVIRGDDHVNNTP 214
Query: 90 CPINSINAVNPIPTMYTWAPIQQNFMVEDETVLHNIPYMGDEILEKDTSFIEELLKNYDG 149
IN +NA+ P +Y P N E + H + + +D F+ E + NY
Sbjct: 215 RQINILNALGGEPPVYAHLPTVLNEQGEKMSKRHGAMSV---MAYRDAGFLPEAVVNYLA 271
Query: 150 KVHGETGSAGFLDDQIFIE 168
++ G A + F+E
Sbjct: 272 RLGWSHGDAEIFSREQFVE 290
>sp|Q39F07|SYE_BURS3 Glutamate--tRNA ligase OS=Burkholderia sp. (strain 383) GN=gltX
PE=3 SV=2
Length = 469
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 53/139 (38%), Gaps = 11/139 (7%)
Query: 35 WNNNLKNMTQI----LGDEKIKRIKSKAVW-VCASVSQQDTAYMKKASAIRLDSTQEVTS 89
W++ +K +I L D I R ++ C V D M IR D T
Sbjct: 158 WDDAVKGRVEISNEELDDLVIARPDGTPIYNFCVVVDDMD---MGITHVIRGDDHVNNTP 214
Query: 90 CPINSINAVNPIPTMYTWAPIQQNFMVEDETVLHNIPYMGDEILEKDTSFIEELLKNYDG 149
IN +NA+ P +Y P N E + H + + +D F+ E + NY
Sbjct: 215 RQINILNALGGEPPVYAHLPTVLNEQGEKMSKRHGAMSV---MAYRDAGFLPEAVVNYLA 271
Query: 150 KVHGETGSAGFLDDQIFIE 168
++ G A + F+E
Sbjct: 272 RLGWSHGDAEIFSREQFVE 290
>sp|B4ECR7|SYE_BURCJ Glutamate--tRNA ligase OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=gltX PE=3 SV=1
Length = 469
Score = 31.6 bits (70), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 13/145 (8%)
Query: 31 IKGT--WNNNLKNMTQI----LGDEKIKRIKSKAVW-VCASVSQQDTAYMKKASAIRLDS 83
+ GT W++ +K +I L D I R ++ C V D M IR D
Sbjct: 152 LTGTVVWDDAVKGRVEISNEELDDLVIARPDGTPIYNFCVVVDDMD---MGITHVIRGDD 208
Query: 84 TQEVTSCPINSINAVNPIPTMYTWAPIQQNFMVEDETVLHNIPYMGDEILEKDTSFIEEL 143
T IN +NA+ P +Y P N E + H + + +D F+ E
Sbjct: 209 HVNNTPRQINILNALGGEPPVYAHLPTVLNEQGEKMSKRHGAMSV---MAYRDAGFLPEA 265
Query: 144 LKNYDGKVHGETGSAGFLDDQIFIE 168
+ NY ++ G A + F+E
Sbjct: 266 VVNYLARLGWSHGDAEIFSREQFVE 290
>sp|Q5XID1|CPIN1_RAT Anamorsin OS=Rattus norvegicus GN=Ciapin1 PE=2 SV=1
Length = 309
Score = 31.2 bits (69), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 136 DTSFIEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKYQVKD 180
D S EE LK G+V G TGS G Q+F+E + L++ K+
Sbjct: 17 DKSSSEEALKKLVGRVQGLTGSEG----QVFVENITQLLQSAHKE 57
>sp|B5YJY3|MUTS_THEYD DNA mismatch repair protein MutS OS=Thermodesulfovibrio
yellowstonii (strain ATCC 51303 / DSM 11347 / YP87)
GN=mutS PE=3 SV=1
Length = 852
Score = 30.8 bits (68), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 122 LHNIP--YMGDEILEKDTSFIEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKY 176
LH +P Y+ + L FI E LK + K+ L+ ++FIELVN ++ +
Sbjct: 476 LHLVPSHYIRKQTLANAERFITEELKELELKIMSAEEKLKILEQELFIELVNSILPF 532
>sp|Q3ACA5|MUTS_CARHZ DNA mismatch repair protein MutS OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=mutS PE=3
SV=1
Length = 841
Score = 30.8 bits (68), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 122 LHNIP--YMGDEILEKDTSFIEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKYQ 177
LH +P Y + + FI E LK+Y+ + G + L+ ++F E+ ++++KYQ
Sbjct: 466 LHLVPADYQRKQTMVNAERFITEELKHYENLILGASEKLANLEYELFCEIRSEILKYQ 523
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.132 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,054,767
Number of Sequences: 539616
Number of extensions: 2530175
Number of successful extensions: 7279
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 7236
Number of HSP's gapped (non-prelim): 45
length of query: 181
length of database: 191,569,459
effective HSP length: 110
effective length of query: 71
effective length of database: 132,211,699
effective search space: 9387030629
effective search space used: 9387030629
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)