Query psy11430
Match_columns 181
No_of_seqs 50 out of 52
Neff 3.6
Searched_HMMs 13730
Date Fri Aug 16 18:15:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11430.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11430hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2b82a1 c.108.1.12 (A:4-212) C 38.0 2.4 0.00018 33.1 -0.7 12 118-129 43-54 (209)
2 d1yzma1 a.2.19.1 (A:456-501) F 37.4 16 0.0012 22.5 3.3 27 19-46 15-41 (46)
3 d1hx6a1 b.121.2.1 (A:15-244) C 31.7 7.3 0.00053 30.2 1.2 30 101-130 147-176 (230)
4 d2e1fa1 a.60.8.1 (A:1142-1235) 27.6 7 0.00051 26.3 0.4 29 118-147 53-81 (94)
5 d1nmla2 a.3.1.5 (A:167-326) Di 25.9 30 0.0022 24.9 3.7 48 121-179 83-136 (160)
6 d2dsma1 d.372.1.1 (A:1-64) Hyp 24.1 15 0.0011 24.0 1.5 13 125-137 22-34 (64)
7 d1go3e2 d.230.1.1 (E:1-78) N-t 21.7 18 0.0013 23.2 1.6 27 127-156 17-43 (78)
8 d1iqca2 a.3.1.5 (A:151-308) Di 20.3 13 0.00095 26.9 0.6 43 126-179 91-135 (158)
9 d2hkja1 a.156.1.3 (A:229-306) 20.1 39 0.0028 21.3 3.0 37 139-178 41-77 (78)
10 d2fnaa1 a.4.5.11 (A:284-356) H 19.4 33 0.0024 22.6 2.5 20 158-177 33-52 (73)
No 1
>d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]}
Probab=38.04 E-value=2.4 Score=33.07 Aligned_cols=12 Identities=42% Similarity=0.487 Sum_probs=10.7
Q ss_pred cccceecCCCCC
Q psy11430 118 DETVLHNIPYMG 129 (181)
Q Consensus 118 DEtvL~nIPYMG 129 (181)
|||||.|.||.+
T Consensus 43 DETvLdnspy~~ 54 (209)
T d2b82a1 43 DDTVLFSSPGFW 54 (209)
T ss_dssp BTTTEECHHHHH
T ss_pred hhhhhcCcHHHH
Confidence 999999999953
No 2
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.37 E-value=16 Score=22.53 Aligned_cols=27 Identities=26% Similarity=0.432 Sum_probs=22.5
Q ss_pred hhhhhhhhhhhhHHHHHHhhHHHHHHHh
Q psy11430 19 IRQKRRHIRAEDIKGTWNNNLKNMTQIL 46 (181)
Q Consensus 19 lrq~kr~kr~d~vk~l~~~Nr~ki~e~~ 46 (181)
|+|.|...|-|+| +.+..|++.+.+-.
T Consensus 15 I~QAk~a~R~dEV-~~Le~NLreLq~e~ 41 (46)
T d1yzma1 15 IRQAKAAGRMDEV-RTLQENLRQLQDEY 41 (46)
T ss_dssp HHHHHHTTCHHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHHhcchHHH-HHHHHHHHHHHHHH
Confidence 7899999999999 56788888877654
No 3
>d1hx6a1 b.121.2.1 (A:15-244) Coat protein p3 {Bacteriophage prd1 [TaxId: 10658]}
Probab=31.74 E-value=7.3 Score=30.25 Aligned_cols=30 Identities=30% Similarity=0.432 Sum_probs=19.5
Q ss_pred CcccceecccccceeeccccceecCCCCCc
Q psy11430 101 IPTMYTWAPIQQNFMVEDETVLHNIPYMGD 130 (181)
Q Consensus 101 iP~m~~W~PlqqNfmvEDEtvL~nIPYMGD 130 (181)
--+||+|.|+.-.=.----.||.|.|---.
T Consensus 147 eltmyywvplaysetdltgavlanvpqskq 176 (230)
T d1hx6a1 147 ELTMYYWVPLAYSETDLTGAVLANVPQSKQ 176 (230)
T ss_dssp EEEEEEEEESSSSSSCCTTCEECSSCCSCC
T ss_pred ceEEEEEEEeeecccccchHHHhcCcchhh
Confidence 347999999974322222348899997543
No 4
>d2e1fa1 a.60.8.1 (A:1142-1235) Werner syndrome ATP-dependent helicase, WRN {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.63 E-value=7 Score=26.33 Aligned_cols=29 Identities=10% Similarity=0.149 Sum_probs=23.7
Q ss_pred cccceecCCCCCccccccchhHHHHHHHhc
Q psy11430 118 DETVLHNIPYMGDEILEKDTSFIEELLKNY 147 (181)
Q Consensus 118 DEtvL~nIPYMGDev~e~D~~FiEELikNY 147 (181)
+...|..||-||...++.=|.||+. |.+|
T Consensus 53 t~~eL~~I~G~g~~k~~kyG~~l~~-I~~~ 81 (94)
T d2e1fa1 53 TVENVKRIDGVSEGKAAMLAPLLEV-IKHF 81 (94)
T ss_dssp SHHHHTTSTTCCHHHHHHTHHHHHH-HHHH
T ss_pred CHHHHcCCCCCCHHHHHHHHHHHHH-HHHH
Confidence 4567999999999999999998884 4555
No 5
>d1nmla2 a.3.1.5 (A:167-326) Di-heme cytochrome c peroxidase {Pseudomonas nautica [TaxId: 2743]}
Probab=25.94 E-value=30 Score=24.88 Aligned_cols=48 Identities=21% Similarity=0.233 Sum_probs=33.5
Q ss_pred ceecC----CCCCccccccchhH--HHHHHHhcCCcccCCCCCccccchHHHHHHHHHHHhhccc
Q psy11430 121 VLHNI----PYMGDEILEKDTSF--IEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKYQVK 179 (181)
Q Consensus 121 vL~nI----PYMGDev~e~D~~F--iEELikNYDGkvHg~~~~~~~inDeifvELv~~l~~y~~~ 179 (181)
-|.|| ||| +||.| |+|.|+-|.+. +.+.-++++-.-.||.=|...+++
T Consensus 83 sLrnv~~TaPY~------HdG~~~tL~evi~~~~~~-----~~~~~Lt~~e~~~LvaFL~tLtd~ 136 (160)
T d1nmla2 83 PLRNIELTAPYF------HSGAVWSLEEAVAVMGTA-----QLGTELNNDEVKSIVAFLKTLTGN 136 (160)
T ss_dssp CCTTGGGCCSBT------TTCCBCCHHHHHHHTCCT-----TTTCCCCHHHHHHHHHHHGGGCCC
T ss_pred cccCccccCccc------cCCCcCCHHHHHHHHhhh-----ccccCCCHHHHHHHHHHHHHcCCC
Confidence 45554 886 55666 89999866442 113347788899999999888765
No 6
>d2dsma1 d.372.1.1 (A:1-64) Hypothetical protein YqaI {Bacillus subtilis [TaxId: 1423]}
Probab=24.07 E-value=15 Score=24.02 Aligned_cols=13 Identities=38% Similarity=0.703 Sum_probs=9.4
Q ss_pred CCCCCccccccch
Q psy11430 125 IPYMGDEILEKDT 137 (181)
Q Consensus 125 IPYMGDev~e~D~ 137 (181)
|-|+|+||+-.|.
T Consensus 22 ~D~~Gsev~p~Dd 34 (64)
T d2dsma1 22 IDFYGDEVTPVDD 34 (64)
T ss_dssp CCTTSSCBCTTSC
T ss_pred HHhhccccccCCc
Confidence 6778888776665
No 7
>d1go3e2 d.230.1.1 (E:1-78) N-terminal, heterodimerisation domain of RBP7 (RpoE) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=21.69 E-value=18 Score=23.20 Aligned_cols=27 Identities=19% Similarity=0.544 Sum_probs=21.0
Q ss_pred CCCccccccchhHHHHHHHhcCCcccCCCC
Q psy11430 127 YMGDEILEKDTSFIEELLKNYDGKVHGETG 156 (181)
Q Consensus 127 YMGDev~e~D~~FiEELikNYDGkvHg~~~ 156 (181)
++|.+ .+..-.++|.+.|.||+.++-|
T Consensus 17 ~~g~~---~~~~i~~~L~~~~egkv~~~~G 43 (78)
T d1go3e2 17 EFGKD---LKETVKKILMEKYEGRLDKDVG 43 (78)
T ss_dssp GTTSC---HHHHHHHHHHHHHTTCEETTTE
T ss_pred HhCcC---HHHHHHHHHHHHhCCcCcCCcC
Confidence 56765 4556788888999999999863
No 8
>d1iqca2 a.3.1.5 (A:151-308) Di-heme cytochrome c peroxidase {Nitrosomonas europaea [TaxId: 915]}
Probab=20.34 E-value=13 Score=26.91 Aligned_cols=43 Identities=14% Similarity=0.221 Sum_probs=31.0
Q ss_pred CCCCccccccchhH--HHHHHHhcCCcccCCCCCccccchHHHHHHHHHHHhhccc
Q psy11430 126 PYMGDEILEKDTSF--IEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKYQVK 179 (181)
Q Consensus 126 PYMGDev~e~D~~F--iEELikNYDGkvHg~~~~~~~inDeifvELv~~l~~y~~~ 179 (181)
||| +||.| |+|.|+.|.. +.-.+ -+.++-.-.||.=|...+++
T Consensus 91 PY~------HdG~~~tL~evI~~~~~-~~~~~----~Ls~~E~~~LvaFL~sLt~~ 135 (158)
T d1iqca2 91 PYF------HDGGAATLEQAVETMGR-IQLNR----EFNKDEVSKIVAFLKTLTGD 135 (158)
T ss_dssp SBS------TTCCBCSHHHHHHHHHH-HHHCC----CCCHHHHHHHHHHHHTTCCC
T ss_pred ccc------cCCccccHHHHHHHhcc-cccCC----CCCHHHHHHHHHHHHhcCCC
Confidence 998 66676 8999997743 21122 36788888899888888765
No 9
>d2hkja1 a.156.1.3 (A:229-306) Topoisomerase VI-B subunit middle domain {Archaeon Sulfolobus shibatae [TaxId: 2286]}
Probab=20.08 E-value=39 Score=21.25 Aligned_cols=37 Identities=16% Similarity=0.231 Sum_probs=30.1
Q ss_pred HHHHHHHhcCCcccCCCCCccccchHHHHHHHHHHHhhcc
Q psy11430 139 FIEELLKNYDGKVHGETGSAGFLDDQIFIELVNDLIKYQV 178 (181)
Q Consensus 139 FiEELikNYDGkvHg~~~~~~~inDeifvELv~~l~~y~~ 178 (181)
.-+|++. .-++|-.+. ++-++++-+..|++++.+|.|
T Consensus 41 ~a~Eil~--~agi~P~~~-~~~L~~~e~~~L~~air~~~d 77 (78)
T d2hkja1 41 TADKILE--LAGLKPNKK-VKNLTEEEITRLVETFKKYED 77 (78)
T ss_dssp HHHHHHH--HHTCCTTSB-GGGCCHHHHHHHHHHHHHCCC
T ss_pred HHHHHHH--HhCCCcccc-cccCCHHHHHHHHHHHhhhhc
Confidence 5666666 336999988 778899999999999999865
No 10
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=19.43 E-value=33 Score=22.62 Aligned_cols=20 Identities=15% Similarity=0.112 Sum_probs=17.4
Q ss_pred ccccchHHHHHHHHHHHhhc
Q psy11430 158 AGFLDDQIFIELVNDLIKYQ 177 (181)
Q Consensus 158 ~~~inDeifvELv~~l~~y~ 177 (181)
|..|+|..|-+|++.|.+|+
T Consensus 33 G~~I~d~~ls~lL~nL~k~~ 52 (73)
T d2fnaa1 33 GIEISDSEIYNYLTQLTKHS 52 (73)
T ss_dssp CSCCCHHHHHHHHHHHHHTT
T ss_pred CCCCChHHHHHHHHHHHHcC
Confidence 34689999999999999986
Done!