BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11433
(941 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P18074|ERCC2_HUMAN TFIIH basal transcription factor complex helicase XPD subunit
OS=Homo sapiens GN=ERCC2 PE=1 SV=1
Length = 760
Score = 514 bits (1325), Expect = e-145, Method: Compositional matrix adjust.
Identities = 245/418 (58%), Positives = 309/418 (73%), Gaps = 44/418 (10%)
Query: 1 VSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEKFDAVGREAPLAPGVYSITKL 60
V+ R GK VDG+CHSLT+S VR +++ ++P C FYE+FDA GRE PL G+Y++ L
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDL 180
Query: 61 KEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNID 120
K +GR G CPYFLAR +I+HA +VVYSYHYLLDPKIA++VSKELAR +VVVFDEAHNID
Sbjct: 181 KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 121 NVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQSARE 180
NVC+DS+SV + RRT+++ GN++TL+ T+ +KE D +LR+EY RLVEGLR+A +ARE
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 181 TDVVLANPVLPDEILQEVVPGNIRTAEHFVGFLKRFIEYLKTRLRVQQVVQESPATFLKD 240
TD LANPVLPDE+LQE VPG+IRTAEHF+GFL+R +EY+K RLRVQ VVQESP F
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAF--- 357
Query: 241 ISSKPAPSMISEAYRYIFSTEEHLKTRLRVQQVVQESPATFLKDISSKVCIERKPLRFCA 300
L ++ +VCI+RKPLRFCA
Sbjct: 358 -----------------------------------------LSGLAQRVCIQRKPLRFCA 376
Query: 301 ERLASLLRTLEITNLTDFSSLVVITHLATLVSSYTKGFAIIVEPFSDKAPTVPNPVLYFC 360
ERL SLL TLEIT+L DFS L ++ + ATLVS+Y KGF II+EPF D+ PT+ NP+L+F
Sbjct: 377 ERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFS 436
Query: 361 CLDSSLAIKPVFDRFQTVVITSGTLSPLDMYPKILNFQPVIMHSFSMTLARPCLLPMV 418
C+D+SLAIKPVF+RFQ+V+ITSGTLSPLD+YPKIL+F PV M +F+MTLAR CL PM+
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMI 494
Score = 267 bits (683), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 134/229 (58%), Positives = 170/229 (74%), Gaps = 17/229 (7%)
Query: 640 RKLL-FIETQD---------ALDSRS-------VSKERDGKIVDGRCHSLTSSSVRDRHK 682
RKLL F E Q+ AL SR V+ R GK VDG+CHSLT+S VR +++
Sbjct: 88 RKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQ 147
Query: 683 AGENIPVCDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVY 742
++P C FYE+FDA GRE PL G+Y++ LK +GR G CPYFLAR +I+HA +VVY
Sbjct: 148 HDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVY 207
Query: 743 SYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLE 802
SYHYLLDPKIA++VSKELAR +VVVFDEAHNIDNVC+DS+SV + RRT+++ GN++TL+
Sbjct: 208 SYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQ 267
Query: 803 GTLKEMKEADSAKLREEYARLVEGLRDAQSARETDVVLANPVLPDEILQ 851
T+ +KE D +LR+EY RLVEGLR+A +ARETD LANPVLPDE+LQ
Sbjct: 268 KTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQ 316
Score = 171 bits (432), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Query: 424 MGLMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM 483
M L +D L V+FPY+YIYPEQ++YM ELK+ LDAKGH +LEMPSGTGKT SLL+LI+AY
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 484 NAHPLDVTKLLYCSRTVPEIEKVVEELARLFDYYIKH-NEEINMTGLVLSSRKNLCIHSE 542
A+PL+VTKL+YCSRTVPEIEKV+EEL +L ++Y K E++ GL LSSRKNLCIH E
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 78/116 (67%), Gaps = 3/116 (2%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
+ S FETR+DI+VIRNYG LL++++ VVPDG+V FFTSY Y+ES VASWY+QGI++N+Q+
Sbjct: 504 ISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQR 563
Query: 640 RKLLFIETQDALDSRSVSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEK 695
KLLFIETQD ++ ++ +GR L S + R K E I Y +
Sbjct: 564 NKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA---RGKVSEGIDFVHHYGR 616
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 69/99 (69%), Gaps = 6/99 (6%)
Query: 821 ARLVEGLRDAQSARETDVVLANPV-----LPDEILQGKTDYGIMIFADKRFARSDKRSKL 875
ARL E LRD RE D + + + ++GKTDYG+M+FADKRFAR DKR KL
Sbjct: 635 ARL-EYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKL 693
Query: 876 PKWIQEYLTDNLTNLSTEEAVQLSKRWLRQMAQPFTRED 914
P+WIQE+LTD NL+ +E VQ++K +LRQMAQPF RED
Sbjct: 694 PRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHRED 732
>sp|A6QLJ0|ERCC2_BOVIN TFIIH basal transcription factor complex helicase XPD subunit
OS=Bos taurus GN=ERCC2 PE=2 SV=1
Length = 760
Score = 508 bits (1309), Expect = e-143, Method: Compositional matrix adjust.
Identities = 242/418 (57%), Positives = 308/418 (73%), Gaps = 44/418 (10%)
Query: 1 VSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEKFDAVGREAPLAPGVYSITKL 60
V+ R GK VDG+CHSLT+S VR +++ ++P C FYE+FD GR+ PL G+Y++ L
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQRDSSLPHCRFYEEFDVHGRQVPLPTGIYNLDDL 180
Query: 61 KEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNID 120
K +GR G CPYFLAR +I+HA +VVYSYHYLLDPKIA++VSKELAR +VVVFDEAHNID
Sbjct: 181 KAVGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 121 NVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQSARE 180
NVC+DS+SV + RRT+++ N++TL+ T+ +KE D +LREEY RLVEGLR+A +ARE
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQANLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARE 300
Query: 181 TDVVLANPVLPDEILQEVVPGNIRTAEHFVGFLKRFIEYLKTRLRVQQVVQESPATFLKD 240
TD LANPVLPDE+L+E VPG+IRTAEHF+GFL+R +EY+K RLRVQ VVQESP F
Sbjct: 301 TDAHLANPVLPDEVLKEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAF--- 357
Query: 241 ISSKPAPSMISEAYRYIFSTEEHLKTRLRVQQVVQESPATFLKDISSKVCIERKPLRFCA 300
L ++ +VCI+RKPLRFCA
Sbjct: 358 -----------------------------------------LSGLAQRVCIQRKPLRFCA 376
Query: 301 ERLASLLRTLEITNLTDFSSLVVITHLATLVSSYTKGFAIIVEPFSDKAPTVPNPVLYFC 360
ERL SLL TLEI++LTDFS L ++ + ATLVS+Y KGF II+EPF D+ PT+ NP+L+F
Sbjct: 377 ERLRSLLYTLEISDLTDFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFS 436
Query: 361 CLDSSLAIKPVFDRFQTVVITSGTLSPLDMYPKILNFQPVIMHSFSMTLARPCLLPMV 418
C+D+SLAIKPVF+RFQ+V+ITSGTLSPLD+YPKIL+F PV M +F+MTLAR CL PM+
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMI 494
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 168/229 (73%), Gaps = 17/229 (7%)
Query: 640 RKLL-FIETQD---------ALDSRS-------VSKERDGKIVDGRCHSLTSSSVRDRHK 682
RKLL F E Q+ AL SR V+ R GK VDG+CHSLT+S VR +++
Sbjct: 88 RKLLSFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQ 147
Query: 683 AGENIPVCDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVY 742
++P C FYE+FD GR+ PL G+Y++ LK +GR G CPYFLAR +I+HA +VVY
Sbjct: 148 RDSSLPHCRFYEEFDVHGRQVPLPTGIYNLDDLKAVGRRQGWCPYFLARYSILHANVVVY 207
Query: 743 SYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLE 802
SYHYLLDPKIA++VSKELAR +VVVFDEAHNIDNVC+DS+SV + RRT+++ N++TL+
Sbjct: 208 SYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQANLETLQ 267
Query: 803 GTLKEMKEADSAKLREEYARLVEGLRDAQSARETDVVLANPVLPDEILQ 851
T+ +KE D +LREEY RLVEGLR+A +ARETD LANPVLPDE+L+
Sbjct: 268 KTVLRIKETDEQRLREEYRRLVEGLREASAARETDAHLANPVLPDEVLK 316
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Query: 424 MGLMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM 483
M L +D L V+FPY+YIYPEQ++YM+ELK+ LDAKGH +LEMPSGTGKT SLL+LI+AY
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ 60
Query: 484 NAHPLDVTKLLYCSRTVPEIEKVVEELARLFDYYIKH-NEEINMTGLVLSSRKNLCIHSE 542
A+PL+VTKL+YCSRTVPEIEKV+EEL +L +Y K E++ GL LSSRKNLCIH E
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEKQEGEKLPFLGLALSSRKNLCIHPE 120
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 78/116 (67%), Gaps = 3/116 (2%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
+ S FETR+DI+VIRNYG LL++++ VVPDG+V FFTSY Y+ES VASWY+QGI++N+Q+
Sbjct: 504 ISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQR 563
Query: 640 RKLLFIETQDALDSRSVSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEK 695
KLLFIETQD ++ ++ +GR L S + R K E I Y +
Sbjct: 564 NKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA---RGKVSEGIDFVHHYGR 616
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 70/99 (70%), Gaps = 6/99 (6%)
Query: 821 ARLVEGLRDAQSARETDVVLANPV-----LPDEILQGKTDYGIMIFADKRFARSDKRSKL 875
ARL E LRD RE D + + + ++GKTDYG+M+FADKRFAR+DKR KL
Sbjct: 635 ARL-EYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKL 693
Query: 876 PKWIQEYLTDNLTNLSTEEAVQLSKRWLRQMAQPFTRED 914
P+WIQE+LTD NL+ +E VQ++K +LRQMAQPF RED
Sbjct: 694 PRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHRED 732
>sp|Q60452|ERCC2_CRIGR TFIIH basal transcription factor complex helicase XPD subunit
OS=Cricetulus griseus GN=ERCC2 PE=1 SV=1
Length = 760
Score = 506 bits (1304), Expect = e-142, Method: Compositional matrix adjust.
Identities = 241/418 (57%), Positives = 306/418 (73%), Gaps = 44/418 (10%)
Query: 1 VSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEKFDAVGREAPLAPGVYSITKL 60
V+ R GK VDG+CHSLT+S VR +++ ++P C FYE+FDA GR+ PL G+Y++ L
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDAHGRQVPLPAGIYNLDDL 180
Query: 61 KEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNID 120
K +G+ G CPYFLAR +I+HA +VVYSYHYLLDPKIA++VSKELAR +VVVFDEAHNID
Sbjct: 181 KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 121 NVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQSARE 180
NVC+DS+SV + RRT+++ N+ TL+ T+ +KE D +LR+EY RLVEGLR+A +ARE
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE 300
Query: 181 TDVVLANPVLPDEILQEVVPGNIRTAEHFVGFLKRFIEYLKTRLRVQQVVQESPATFLKD 240
TD LANPVLPDE+LQE VPG+IRTAEHF+GFL+R +EY+K RLRVQ VVQESP F
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAF--- 357
Query: 241 ISSKPAPSMISEAYRYIFSTEEHLKTRLRVQQVVQESPATFLKDISSKVCIERKPLRFCA 300
L ++ +VCI+RKPLRFCA
Sbjct: 358 -----------------------------------------LSGLAQRVCIQRKPLRFCA 376
Query: 301 ERLASLLRTLEITNLTDFSSLVVITHLATLVSSYTKGFAIIVEPFSDKAPTVPNPVLYFC 360
ERL SLL TLEI +L DFS L ++ + ATLVS+Y KGF II+EPF D+ PT+ NP+L+F
Sbjct: 377 ERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFS 436
Query: 361 CLDSSLAIKPVFDRFQTVVITSGTLSPLDMYPKILNFQPVIMHSFSMTLARPCLLPMV 418
C+D+SLAIKPVF+RFQ+V+ITSGTLSPLD+YPKIL+F PV M +F+MTLAR CL PM+
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMI 494
Score = 261 bits (667), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/229 (57%), Positives = 168/229 (73%), Gaps = 17/229 (7%)
Query: 640 RKLL-FIETQD---------ALDSRS-------VSKERDGKIVDGRCHSLTSSSVRDRHK 682
RKLL F E Q+ AL SR V+ R GK VDG+CHSLT+S VR +++
Sbjct: 88 RKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQ 147
Query: 683 AGENIPVCDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVY 742
++P C FYE+FDA GR+ PL G+Y++ LK +G+ G CPYFLAR +I+HA +VVY
Sbjct: 148 QDASLPHCRFYEEFDAHGRQVPLPAGIYNLDDLKALGQRQGWCPYFLARYSILHANVVVY 207
Query: 743 SYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLE 802
SYHYLLDPKIA++VSKELAR +VVVFDEAHNIDNVC+DS+SV + RRT+++ N+ TL+
Sbjct: 208 SYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQ 267
Query: 803 GTLKEMKEADSAKLREEYARLVEGLRDAQSARETDVVLANPVLPDEILQ 851
T+ +KE D +LR+EY RLVEGLR+A +ARETD LANPVLPDE+LQ
Sbjct: 268 KTVLRIKETDEQRLRDEYRRLVEGLREASAARETDAHLANPVLPDEVLQ 316
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/120 (67%), Positives = 98/120 (81%), Gaps = 1/120 (0%)
Query: 424 MGLMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM 483
M L +D L V+FPY+YIYPEQ++YM+ELK+ LDAKGH +LEMPSGTGKT SLL+LIVAY
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ 60
Query: 484 NAHPLDVTKLLYCSRTVPEIEKVVEELARLFDYYIKH-NEEINMTGLVLSSRKNLCIHSE 542
A PL+VTKL+YCSRTVPEIEKV+EEL +L +Y + E++ GL LSSRKNLCIH E
Sbjct: 61 RAFPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPE 120
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 78/116 (67%), Gaps = 3/116 (2%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
+ S FETR+DI+VIRNYG LL++++ VVPDG+V FFTSY Y+ES VASWY+QGI++N+Q+
Sbjct: 504 ISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQR 563
Query: 640 RKLLFIETQDALDSRSVSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEK 695
KLLFIETQD ++ ++ +GR L S + R K E I Y +
Sbjct: 564 NKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA---RGKVSEGIDFVHHYGR 616
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 6/99 (6%)
Query: 821 ARLVEGLRDAQSARETDVVLANPV-----LPDEILQGKTDYGIMIFADKRFARSDKRSKL 875
ARL E LRD RE D + + + ++GKTDYG+M+FADKRFAR+DKR KL
Sbjct: 635 ARL-EYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKL 693
Query: 876 PKWIQEYLTDNLTNLSTEEAVQLSKRWLRQMAQPFTRED 914
P+WIQE+LTD+ NL+ +E VQ++K +LRQMAQPF RED
Sbjct: 694 PRWIQEHLTDSNLNLTVDEGVQVAKYFLRQMAQPFHRED 732
>sp|O08811|ERCC2_MOUSE TFIIH basal transcription factor complex helicase XPD subunit
OS=Mus musculus GN=Ercc2 PE=2 SV=2
Length = 760
Score = 504 bits (1297), Expect = e-141, Method: Compositional matrix adjust.
Identities = 241/418 (57%), Positives = 304/418 (72%), Gaps = 44/418 (10%)
Query: 1 VSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEKFDAVGREAPLAPGVYSITKL 60
V+ R GK VDG+CHSLT+S VR +++ ++P C FYE+FD GR+ PL G+Y++ L
Sbjct: 121 VTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDIHGRQMPLPAGIYNLDDL 180
Query: 61 KEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNID 120
K +G+ G CPYFLAR +I+HA +VVYSYHYLLDPKIA++VSKELAR +VVVFDEAHNID
Sbjct: 181 KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID 240
Query: 121 NVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQSARE 180
NVC+DS+SV + RRT+++ N+ TL+ T+ +KE D +LR+EY RLVEGLR+A ARE
Sbjct: 241 NVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASVARE 300
Query: 181 TDVVLANPVLPDEILQEVVPGNIRTAEHFVGFLKRFIEYLKTRLRVQQVVQESPATFLKD 240
TD LANPVLPDE+LQE VPG+IRTAEHF+GFL+R +EY+K RLRVQ VVQESP F
Sbjct: 301 TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAF--- 357
Query: 241 ISSKPAPSMISEAYRYIFSTEEHLKTRLRVQQVVQESPATFLKDISSKVCIERKPLRFCA 300
L ++ +VCI+RKPLRFCA
Sbjct: 358 -----------------------------------------LSGLAQRVCIQRKPLRFCA 376
Query: 301 ERLASLLRTLEITNLTDFSSLVVITHLATLVSSYTKGFAIIVEPFSDKAPTVPNPVLYFC 360
ERL SLL TLEI +L DFS L ++ + ATLVS+Y KGF II+EPF D+ PT+ NPVL+F
Sbjct: 377 ERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPVLHFS 436
Query: 361 CLDSSLAIKPVFDRFQTVVITSGTLSPLDMYPKILNFQPVIMHSFSMTLARPCLLPMV 418
C+D+SLAIKPVF+RFQ+V+ITSGTLSPLD+YPKIL+F PV M +F+MTLAR CL PM+
Sbjct: 437 CMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMI 494
Score = 258 bits (658), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 130/229 (56%), Positives = 166/229 (72%), Gaps = 17/229 (7%)
Query: 640 RKLL-FIETQD---------ALDSRS-------VSKERDGKIVDGRCHSLTSSSVRDRHK 682
RKLL F E Q+ AL SR V+ R GK VDG+CHSLT+S VR +++
Sbjct: 88 RKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQ 147
Query: 683 AGENIPVCDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVY 742
++P C FYE+FD GR+ PL G+Y++ LK +G+ G CPYFLAR +I+HA +VVY
Sbjct: 148 QDASLPHCRFYEEFDIHGRQMPLPAGIYNLDDLKALGQRQGWCPYFLARYSILHANVVVY 207
Query: 743 SYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLE 802
SYHYLLDPKIA++VSKELAR +VVVFDEAHNIDNVC+DS+SV + RRT+++ N+ TL+
Sbjct: 208 SYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQSNLDTLQ 267
Query: 803 GTLKEMKEADSAKLREEYARLVEGLRDAQSARETDVVLANPVLPDEILQ 851
T+ +KE D +LR+EY RLVEGLR+A ARETD LANPVLPDE+LQ
Sbjct: 268 KTVLRIKETDEQRLRDEYRRLVEGLREASVARETDAHLANPVLPDEVLQ 316
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 81/120 (67%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
Query: 424 MGLMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM 483
M L +D L V+FPY+YIYPEQ++YM+ELK+ LDAKGH +LEMPSGTGKT SLL+LIVAY
Sbjct: 1 MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ 60
Query: 484 NAHPLDVTKLLYCSRTVPEIEKVVEELARLFDYYIKH-NEEINMTGLVLSSRKNLCIHSE 542
A+PL+VTKL+YCSRTVPEIEKV+EEL +L +Y + E++ GL LSSRKNLCIH E
Sbjct: 61 RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPE 120
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 78/116 (67%), Gaps = 3/116 (2%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
+ S FETR+DI+VIRNYG LL++++ VVPDG+V FFTSY Y+ES VASWY+QGI++N+Q+
Sbjct: 504 ISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQR 563
Query: 640 RKLLFIETQDALDSRSVSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEK 695
KLLFIETQD ++ ++ +GR L S + R K E I Y +
Sbjct: 564 NKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA---RGKVSEGIDFVHHYGR 616
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 6/99 (6%)
Query: 821 ARLVEGLRDAQSARETDVVLANPV-----LPDEILQGKTDYGIMIFADKRFARSDKRSKL 875
ARL E LRD RE D + + + ++GKTDYG+M+FADKRFAR+DKR KL
Sbjct: 635 ARL-EYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARADKRGKL 693
Query: 876 PKWIQEYLTDNLTNLSTEEAVQLSKRWLRQMAQPFTRED 914
P+WIQE+LTD+ NL+ +E VQ++K +LRQMAQPF RED
Sbjct: 694 PRWIQEHLTDSNLNLTVDEGVQVAKYFLRQMAQPFHRED 732
>sp|P26659|RAD15_SCHPO DNA repair helicase rad15 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=rad15 PE=1 SV=2
Length = 772
Score = 412 bits (1059), Expect = e-114, Method: Compositional matrix adjust.
Identities = 195/418 (46%), Positives = 283/418 (67%), Gaps = 44/418 (10%)
Query: 1 VSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEKFDAVGREAPLAPGVYSITKL 60
V +E++G +VD RC SLT+ VR++ AG ++P C+F++ + + + ++ GV+++ +
Sbjct: 120 VRREKNGNVVDARCRSLTAGFVREQRLAGMDVPTCEFHDNLEDLEPHSLISNGVWTLDDI 179
Query: 61 KEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNID 120
E G + CPYF R+ + +++YSYHYLLDPKIA VS+EL++ +VVFDEAHNID
Sbjct: 180 TEYGEKTTRCPYFTVRRMLPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNID 239
Query: 121 NVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQSARE 180
NVC++SLS+ + ++ KA +I +LE + E+K++DS KL++EY +LV GL+DA +A +
Sbjct: 240 NVCIESLSIDLTESSLRKASKSILSLEQKVNEVKQSDSKKLQDEYQKLVRGLQDANAAND 299
Query: 181 TDVVLANPVLPDEILQEVVPGNIRTAEHFVGFLKRFIEYLKTRLRVQQVVQESPATFLKD 240
D +ANPVLP+++L+E VPGNIR AEHF+ FLKRF+EYLKTR++V V+ E+P +FL+
Sbjct: 300 EDQFMANPVLPEDVLKEAVPGNIRRAEHFIAFLKRFVEYLKTRMKVLHVIAETPTSFLQH 359
Query: 241 ISSKPAPSMISEAYRYIFSTEEHLKTRLRVQQVVQESPATFLKDISSKVCIERKPLRFCA 300
+ KDI+ I++KPLRFCA
Sbjct: 360 V-----------------------------------------KDIT---FIDKKPLRFCA 375
Query: 301 ERLASLLRTLEITNLTDFSSLVVITHLATLVSSYTKGFAIIVEPFSDKAPTVPNPVLYFC 360
ERL SL+R L+I+ + DF SL + ATLV++Y +GF +I+EPF + TVPNP+L F
Sbjct: 376 ERLTSLVRALQISLVEDFHSLQQVVAFATLVATYERGFILILEPFETENATVPNPILRFS 435
Query: 361 CLDSSLAIKPVFDRFQTVVITSGTLSPLDMYPKILNFQPVIMHSFSMTLARPCLLPMV 418
CLD+S+AIKPVF+RF++V+ITSGTLSPLDMYPK+L F V+ S+ M+LAR C LPMV
Sbjct: 436 CLDASIAIKPVFERFRSVIITSGTLSPLDMYPKMLQFNTVMQESYGMSLARNCFLPMV 493
Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 87/197 (44%), Positives = 141/197 (71%)
Query: 655 SVSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEKFDAVGREAPLAPGVYSITK 714
SV +E++G +VD RC SLT+ VR++ AG ++P C+F++ + + + ++ GV+++
Sbjct: 119 SVRREKNGNVVDARCRSLTAGFVREQRLAGMDVPTCEFHDNLEDLEPHSLISNGVWTLDD 178
Query: 715 LKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNI 774
+ E G + CPYF R+ + +++YSYHYLLDPKIA VS+EL++ +VVFDEAHNI
Sbjct: 179 ITEYGEKTTRCPYFTVRRMLPFCNVIIYSYHYLLDPKIAERVSRELSKDCIVVFDEAHNI 238
Query: 775 DNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQSAR 834
DNVC++SLS+ + ++ KA +I +LE + E+K++DS KL++EY +LV GL+DA +A
Sbjct: 239 DNVCIESLSIDLTESSLRKASKSILSLEQKVNEVKQSDSKKLQDEYQKLVRGLQDANAAN 298
Query: 835 ETDVVLANPVLPDEILQ 851
+ D +ANPVLP+++L+
Sbjct: 299 DEDQFMANPVLPEDVLK 315
Score = 133 bits (335), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/142 (52%), Positives = 88/142 (61%), Gaps = 10/142 (7%)
Query: 424 MGLMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM 483
M IDDLP+ FPY IYPEQY YM +LK +LDA G LLEMPSGTGKT SLLSLIV+Y
Sbjct: 1 MKFYIDDLPILFPYPRIYPEQYQYMCDLKHSLDAGGIALLEMPSGTGKTISLLSLIVSYQ 60
Query: 484 NAHPLDVTKLLYCSRTVPEIEKVVEELARLFDYYIKH-NEEINMTGLVLSSRKNLCIHSE 542
+P + KL+YCSRT+ EI+K + EL RL Y E GL L+SRKNLC+H
Sbjct: 61 QHYP-EHRKLIYCSRTMSEIDKALAELKRLMAYRTSQLGYEEPFLGLGLTSRKNLCLHP- 118
Query: 543 FETRDDISVIRNYGQLLVDIAC 564
SV R +VD C
Sbjct: 119 -------SVRREKNGNVVDARC 133
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 57/112 (50%), Positives = 77/112 (68%), Gaps = 6/112 (5%)
Query: 821 ARLVEGLRDAQSARETDVVLANPV-----LPDEILQGKTDYGIMIFADKRFARSDKRSKL 875
ARL E LRD RE D + + + +L+GK D+GIM+ ADKR+ RSDKR+KL
Sbjct: 634 ARL-EFLRDTYQIREADFLTFDAMRHAAQCLGRVLRGKDDHGIMVLADKRYGRSDKRTKL 692
Query: 876 PKWIQEYLTDNLTNLSTEEAVQLSKRWLRQMAQPFTREDMLGVALLSLDQLL 927
PKWIQ+Y+T+ TNLST+ ++ L+K++LR MAQPFT D G++ SLD LL
Sbjct: 693 PKWIQQYITEGATNLSTDMSLALAKKFLRTMAQPFTASDQEGISWWSLDDLL 744
Score = 89.7 bits (221), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 76/134 (56%), Gaps = 5/134 (3%)
Query: 554 NYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGVVC 613
+YG L C +P VV + + + S FE R+D SV+RNYG +LV+ + + PDG+V
Sbjct: 479 SYGMSLAR-NCFLP-MVVTRGSDQVAISSKFEARNDPSVVRNYGNILVEFSKITPDGLVA 536
Query: 614 FFTSYLYLESVVASWYDQGIIDNLQKRKLLFIETQDALDSRSVSKERDGKIVDGRCHSLT 673
FF SYLYLES+V+SW GI+D + K KL+ +ET D ++ + +GR L
Sbjct: 537 FFPSYLYLESIVSSWQSMGILDEVWKYKLILVETPDPHETTLALETYRAACSNGRGAVLL 596
Query: 674 SSSVRDRHKAGENI 687
S + R K E +
Sbjct: 597 SVA---RGKVSEGV 607
>sp|Q8W4M7|ERCC2_ARATH DNA repair helicase UVH6 OS=Arabidopsis thaliana GN=UVH6 PE=1 SV=1
Length = 758
Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust.
Identities = 184/409 (44%), Positives = 249/409 (60%), Gaps = 44/409 (10%)
Query: 10 VDGRCHSLTSSSVRDRHKAGENIPVCDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGL 69
VD C T+S VR N+ +CDF+E ++ A L PGVY++ L+ G+ G
Sbjct: 130 VDAACRKRTASWVRALSTENPNVELCDFFENYEKAAENALLPPGVYTLEDLRAFGKNRGW 189
Query: 70 CPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSV 129
CPYFLAR I A ++VYSY YLLDPK+A +SKEL + SVVVFDEAHNIDNVC+++LSV
Sbjct: 190 CPYFLARHMIQFANVIVYSYQYLLDPKVAGFISKELQKESVVVFDEAHNIDNVCIEALSV 249
Query: 130 RINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQSARETDVVLANPV 189
+ R T+E A N+ + + K D+ +LR EY RLVEGL D LANP
Sbjct: 250 SVRRVTLEGANRNLNKIRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSGGDQWLANPA 309
Query: 190 LPDEILQEVVPGNIRTAEHFVGFLKRFIEYLKTRLRVQQVVQESPATFLKDISSKPAPSM 249
LP +IL+E VPGNIR AEHFV L+R ++YL RL + V +ESP +F+ ++S+
Sbjct: 310 LPHDILKEAVPGNIRRAEHFVHVLRRLLQYLGVRLDTENVEKESPVSFVSSLNSQAG--- 366
Query: 250 ISEAYRYIFSTEEHLKTRLRVQQVVQESPATFLKDISSKVCIERKPLRFCAERLASLLRT 309
IE+K L+FC +RL SL+ T
Sbjct: 367 -----------------------------------------IEQKTLKFCYDRLQSLMLT 385
Query: 310 LEITNLTDFSSLVVITHLATLVSSYTKGFAIIVEPFSDKAPTVPNPVLYFCCLDSSLAIK 369
LEIT+ +F + + ATLV +Y +GF+II+EP+ ++ P +P+P+L C D+SLAIK
Sbjct: 386 LEITDTDEFLPIQTVCDFATLVGTYARGFSIIIEPYDERMPHIPDPILQLSCHDASLAIK 445
Query: 370 PVFDRFQTVVITSGTLSPLDMYPKILNFQPVIMHSFSMTLARPCLLPMV 418
PVFDRFQ+VVITSGTLSP+D+YP++LNF PV+ SF M++ R C+ PMV
Sbjct: 446 PVFDRFQSVVITSGTLSPIDLYPRLLNFTPVVSRSFKMSMTRDCICPMV 494
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 116/187 (62%)
Query: 665 VDGRCHSLTSSSVRDRHKAGENIPVCDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGL 724
VD C T+S VR N+ +CDF+E ++ A L PGVY++ L+ G+ G
Sbjct: 130 VDAACRKRTASWVRALSTENPNVELCDFFENYEKAAENALLPPGVYTLEDLRAFGKNRGW 189
Query: 725 CPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSV 784
CPYFLAR I A ++VYSY YLLDPK+A +SKEL + SVVVFDEAHNIDNVC+++LSV
Sbjct: 190 CPYFLARHMIQFANVIVYSYQYLLDPKVAGFISKELQKESVVVFDEAHNIDNVCIEALSV 249
Query: 785 RINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQSARETDVVLANPV 844
+ R T+E A N+ + + K D+ +LR EY RLVEGL D LANP
Sbjct: 250 SVRRVTLEGANRNLNKIRQEIDRFKATDAGRLRAEYNRLVEGLALRGDLSGGDQWLANPA 309
Query: 845 LPDEILQ 851
LP +IL+
Sbjct: 310 LPHDILK 316
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 94/130 (72%), Gaps = 4/130 (3%)
Query: 424 MGLMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM 483
M I+D+ V+FPY+ IYPEQY YMVELK+ALDAKGHCLLEMP+GTGKT +LLSLI +Y
Sbjct: 1 MIFKIEDVTVYFPYDNIYPEQYEYMVELKRALDAKGHCLLEMPTGTGKTIALLSLITSYR 60
Query: 484 NAHPLDVTKLLYCSRTVPEIEKVVEELARLFDYYIKH-NEEINMTGLVLSSRKNLCIHSE 542
+ P KL+YC+RTV E+EK + EL L DY ++H + + L LSSRKNLC++++
Sbjct: 61 LSRPDSPIKLVYCTRTVHEMEKTLGELKLLHDYQVRHLGTQAKILALGLSSRKNLCVNTK 120
Query: 543 F---ETRDDI 549
E RD +
Sbjct: 121 VLAAENRDSV 130
Score = 90.9 bits (224), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 564 CVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLES 623
C+ P V+ + L + + F+ R D V+RNYG+LLV++ +VPDGVVCFF SY Y++
Sbjct: 489 CICP-MVLTRGSDQLPVSTKFDMRSDPGVVRNYGKLLVEMVSIVPDGVVCFFVSYSYMDG 547
Query: 624 VVASWYDQGIIDNLQKRKLLFIETQDALDS 653
++A+W + GI+ + ++KL+FIETQD +++
Sbjct: 548 IIATWNETGILKEIMQQKLVFIETQDVVET 577
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 57/81 (70%)
Query: 849 ILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYLTDNLTNLSTEEAVQLSKRWLRQMAQ 908
+++ K DYG+MIFADKR++R DKRSKLP WI +L D NLST+ A+ +++ +LR+MAQ
Sbjct: 667 VIRSKADYGMMIFADKRYSRHDKRSKLPGWILSHLRDAHLNLSTDMAIHIAREFLRKMAQ 726
Query: 909 PFTREDMLGVALLSLDQLLEK 929
P+ + +G L + LEK
Sbjct: 727 PYDKAGTMGRKTLLTQEDLEK 747
>sp|P06839|RAD3_YEAST DNA repair helicase RAD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD3 PE=1 SV=1
Length = 778
Score = 367 bits (942), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/507 (40%), Positives = 293/507 (57%), Gaps = 77/507 (15%)
Query: 1 VSKERDGKIVDGRCHSLTSSSVRDR--HKAGENIPVCDFYEKFDAVGREAPLAPGVYSIT 58
VSKER G +VD +C +T+ + + N+ +C+++E + E L GV+S
Sbjct: 120 VSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFE 179
Query: 59 KLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHN 118
KL + E LCPYF+ R+ I I++YSYHYLLDPKIA VS E+++ S+V+FDEAHN
Sbjct: 180 KLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHN 239
Query: 119 IDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQS- 177
IDNVC++SLS+ + + +A L+ + E+++ DS KL++EY +LV+GL A
Sbjct: 240 IDNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADIL 299
Query: 178 ARETDVVLANPVLPDEILQEVVPGNIRTAEHFVGFLKRFIEYLKTRLRVQQVVQESPATF 237
+ + + PVLP ++L E +PGNIR AEHFV FLKR IEYLKTR++V V+ E+P +F
Sbjct: 300 TDQEEPFVETPVLPQDLLTEAIPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSF 359
Query: 238 LKDISSKPAPSMISEAYRYIFSTEEHLKTRLRVQQVVQESPATFLKDISSKVCIERKPLR 297
L +HLK TF IERKPLR
Sbjct: 360 L-----------------------QHLKQ------------LTF---------IERKPLR 375
Query: 298 FCAERLASLLRTLEITNLTDFSSLVVITHLATLVSSYTKGFAIIVEPFSDKAPTVPNPVL 357
FC+ERL+ L+RTLE+T + DF++L I ATL+S+Y +GF +I+EP+ + VPNP++
Sbjct: 376 FCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPIM 435
Query: 358 YFCCLDSSLAIKPVFDRFQTVVITSGTLSPLDMYPKILNFQPVIMHSFSMTLARPCLLPM 417
F CLD+S+AIKPVF+RF +V+ITSGT+SPLDMYP++LNF+ V+ S++MTLA+ LPM
Sbjct: 436 RFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFKTVLQKSYAMTLAKKSFLPM 495
Query: 418 ----------------------VRENYAMGLM------IDDLPVFFPYEYIYPEQYAYMV 449
+ NY L+ D + VFFP Y+Y E M
Sbjct: 496 IITKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFP-SYLYMESIVSMW 554
Query: 450 ELKKALD-AKGHCLLEMPSGTGKTTSL 475
+ LD H L+ + + + TSL
Sbjct: 555 QTMGILDEVWKHKLILVETPDAQETSL 581
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 122/198 (61%), Gaps = 3/198 (1%)
Query: 656 VSKERDGKIVDGRCHSLTSSSVRDR--HKAGENIPVCDFYEKFDAVGREAPLAPGVYSIT 713
VSKER G +VD +C +T+ + + N+ +C+++E + E L GV+S
Sbjct: 120 VSKERKGTVVDEKCRRMTNGQAKRKLEEDPEANVELCEYHENLYNIEVEDYLPKGVFSFE 179
Query: 714 KLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHN 773
KL + E LCPYF+ R+ I I++YSYHYLLDPKIA VS E+++ S+V+FDEAHN
Sbjct: 180 KLLKYCEEKTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDSIVIFDEAHN 239
Query: 774 IDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQS- 832
IDNVC++SLS+ + + +A L+ + E+++ DS KL++EY +LV+GL A
Sbjct: 240 IDNVCIESLSLDLTTDALRRATRGANALDERISEVRKVDSQKLQDEYEKLVQGLHSADIL 299
Query: 833 ARETDVVLANPVLPDEIL 850
+ + + PVLP ++L
Sbjct: 300 TDQEEPFVETPVLPQDLL 317
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/120 (56%), Positives = 83/120 (69%), Gaps = 2/120 (1%)
Query: 424 MGLMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM 483
M IDDLPV FPY IYPEQY YM ++KK LD G+ +LEMPSGTGKT SLLSL +AY
Sbjct: 1 MKFYIDDLPVLFPYPKIYPEQYNYMCDIKKTLDVGGNSILEMPSGTGKTVSLLSLTIAYQ 60
Query: 484 NAHPLDVTKLLYCSRTVPEIEKVVEELARLFDYYIKH-NEEINMTGLVLSSRKNLCIHSE 542
+P + K++YCSRT+ EIEK + EL L DY K + + GL L+SRKNLC+H E
Sbjct: 61 MHYP-EHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQEDFRGLGLTSRKNLCLHPE 119
Score = 88.2 bits (217), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
+ S FE R+D S++RNYG +LV+ A + PDG+V FF SYLY+ES+V+ W GI+D + K
Sbjct: 506 ISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVFFPSYLYMESIVSMWQTMGILDEVWK 565
Query: 640 RKLLFIETQDALDSRSVSKERDGKIVDGRCHSLTSSSVRDRHKAGENI 687
KL+ +ET DA ++ + +GR L S + R K E I
Sbjct: 566 HKLILVETPDAQETSLALETYRKACSNGRGAILLSVA---RGKVSEGI 610
Score = 86.7 bits (213), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 65/88 (73%), Gaps = 2/88 (2%)
Query: 849 ILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYLTDNLTNLSTEEAVQLSKRWLRQMAQ 908
+L+GK DYG+M+ AD+RF+R KRS+LPKWI + L+D NLST+ A+ +K++LR MAQ
Sbjct: 669 VLRGKDDYGVMVLADRRFSR--KRSQLPKWIAQGLSDADLNLSTDMAISNTKQFLRTMAQ 726
Query: 909 PFTREDMLGVALLSLDQLLEKEHARAEE 936
P +D GV++ S + L++ +++R ++
Sbjct: 727 PTDPKDQEGVSVWSYEDLIKHQNSRKDQ 754
>sp|Q55G81|ERCC2_DICDI TFIIH basal transcription factor complex helicase repD subunit
OS=Dictyostelium discoideum GN=repD PE=2 SV=1
Length = 776
Score = 328 bits (842), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 167/418 (39%), Positives = 251/418 (60%), Gaps = 50/418 (11%)
Query: 1 VSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEKFDAVGREAPLAPGVYSITKL 60
VS+ERDGK+VD C LTSS R+ + + C F+E F++ G+E L GVYS+ L
Sbjct: 120 VSEERDGKVVDALCRELTSSWNRESPTSEK----CKFFENFESNGKEI-LLEGVYSLEDL 174
Query: 61 KEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNID 120
KE G + +CPYFL+R + A IV++SY YLLDPKIA+++S +S+VVFDEAHNID
Sbjct: 175 KEYGLKHQMCPYFLSRHMLNFANIVIFSYQYLLDPKIASLISSSFPSNSIVVFDEAHNID 234
Query: 121 NVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQSARE 180
NVC+++LS+ I+ + ++ + NI + ++++K+ D +L++EY RLV GL + S R
Sbjct: 235 NVCINALSINIDNKLLDTSSKNIAKINKQIEDIKKVDEKRLKDEYQRLVNGLARSGSTR- 293
Query: 181 TDVVLANPVLPDEILQEVVPGNIRTAEHFVGFLKRFIEYLKTRLRVQQVVQESPATFLKD 240
D ++PVLP++++QE VPGNIR AEHF+ L+R ++YLK+RL+ Q ++ ESP FL+
Sbjct: 294 ADETTSDPVLPNDVIQEAVPGNIRKAEHFISLLRRVVDYLKSRLKSQMLLSESPLAFLQG 353
Query: 241 ISSKPAPSMISEAYRYIFSTEEHLKTRLRVQQVVQESPATFLKDISSKVCIERKPLRFCA 300
+ A + S R+ S L LR+ V Q
Sbjct: 354 LYH--ATQISSRTLRFCSSRLSSLLRTLRINDVNQ------------------------- 386
Query: 301 ERLASLLRTLEITNLTDFSSLVVITHLATLVSSYTKGFAIIVEPFSDKAPTVPNPVLYFC 360
FS + +I ATLV +Y GF II+EP+ + + + FC
Sbjct: 387 -----------------FSGISLIADFATLVGTYNNGFLIIIEPYYQRQNNTYDQIFQFC 429
Query: 361 CLDSSLAIKPVFDRFQTVVITSGTLSPLDMYPKILNFQPVIMHSFSMTLARPCLLPMV 418
CLD+S+ +KP+FD++++VVITSGTLSPLD+Y K+LNF+P ++ +M+L R C+ P +
Sbjct: 430 CLDASIGMKPIFDKYRSVVITSGTLSPLDIYTKMLNFRPTVVERLTMSLNRNCICPCI 487
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/196 (44%), Positives = 133/196 (67%), Gaps = 6/196 (3%)
Query: 656 VSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEKFDAVGREAPLAPGVYSITKL 715
VS+ERDGK+VD C LTSS R+ + + C F+E F++ G+E L GVYS+ L
Sbjct: 120 VSEERDGKVVDALCRELTSSWNRESPTSEK----CKFFENFESNGKEI-LLEGVYSLEDL 174
Query: 716 KEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNID 775
KE G + +CPYFL+R + A IV++SY YLLDPKIA+++S +S+VVFDEAHNID
Sbjct: 175 KEYGLKHQMCPYFLSRHMLNFANIVIFSYQYLLDPKIASLISSSFPSNSIVVFDEAHNID 234
Query: 776 NVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQSARE 835
NVC+++LS+ I+ + ++ + NI + ++++K+ D +L++EY RLV GL + S R
Sbjct: 235 NVCINALSINIDNKLLDTSSKNIAKINKQIEDIKKVDEKRLKDEYQRLVNGLARSGSTR- 293
Query: 836 TDVVLANPVLPDEILQ 851
D ++PVLP++++Q
Sbjct: 294 ADETTSDPVLPNDVIQ 309
Score = 131 bits (329), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/134 (51%), Positives = 85/134 (63%), Gaps = 10/134 (7%)
Query: 424 MGLMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM 483
M I+DL V+FPY YIYPEQY+YMV LK++LD G C+LEMPSGTGKT SLLSLI +Y
Sbjct: 1 MKFYIEDLLVYFPYSYIYPEQYSYMVALKRSLDNGGPCILEMPSGTGKTVSLLSLISSYQ 60
Query: 484 NAHPLDVTKLLYCSRTVPEIEKVVEELARLFDYYIKHNEEINMTG-----LVLSSRKNLC 538
+P KL+YCSRTVPEIE+ EE R+ Y N E+ + +SSR+NLC
Sbjct: 61 VKNP--SIKLIYCSRTVPEIEQATEEARRVLQY---RNSEMGEESPKTLCMSMSSRRNLC 115
Query: 539 IHSEFETRDDISVI 552
I D V+
Sbjct: 116 IQPRVSEERDGKVV 129
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 81/123 (65%), Gaps = 6/123 (4%)
Query: 821 ARLVEGLRDAQSARETDVVLANPVLP-----DEILQGKTDYGIMIFADKRFARSDKRSKL 875
ARL E LRD RE + + + + +++GK+DYGIMIFADKR+ R DKR+KL
Sbjct: 628 ARL-EFLRDRYQIRENEFLTFDAMRTASQCVGRVIRGKSDYGIMIFADKRYNRLDKRNKL 686
Query: 876 PKWIQEYLTDNLTNLSTEEAVQLSKRWLRQMAQPFTREDMLGVALLSLDQLLEKEHARAE 935
P+WI ++ NLST+ A+ LSK +LR+M QPF+RE+ LG +L SL+ + ++ ++
Sbjct: 687 PQWILQFCQPQHLNLSTDMAISLSKTFLREMGQPFSREEQLGKSLWSLEHVEKQSTSKPP 746
Query: 936 EEE 938
+++
Sbjct: 747 QQQ 749
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 62/93 (66%), Gaps = 7/93 (7%)
Query: 564 CVVPDGVVCFFT---SYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLY 620
C+ P C T + + + F+ R D +V+RNYG LLV+++ +VPDG++CFFTSY Y
Sbjct: 482 CICP----CILTRGSDQISISTKFDVRSDTAVVRNYGALLVEVSAIVPDGIICFFTSYSY 537
Query: 621 LESVVASWYDQGIIDNLQKRKLLFIETQDALDS 653
+E +V+ W + G+++N+ KL+F+ET D +S
Sbjct: 538 MEQIVSVWNEMGLLNNILTNKLIFVETSDPAES 570
>sp|B4PZB4|RTEL1_DROYA Regulator of telomere elongation helicase 1 homolog OS=Drosophila
yakuba GN=GE16425 PE=3 SV=1
Length = 985
Score = 74.7 bits (182), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 112/234 (47%), Gaps = 33/234 (14%)
Query: 51 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 110
P + I L ++G+ L +CPYF +R+ + A I Y+YLLDPK EL +++
Sbjct: 190 GPSIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELG-NTI 248
Query: 111 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTL-----EGTLKEMKEADSAKLR-EE 164
V+ DEAHNI+ +C +S SV+I + A+ ++ + G ++M + ++
Sbjct: 249 VILDEAHNIEKICEESASVQIKSSDVAMAIEDVTHIMQVFASGESQDMGGDEPKDFTLDD 308
Query: 165 YARLVEGLRDAQSARETDVVLANPV----LPDEILQEVVP------GNIRTAEHFVGFLK 214
L E L + + A + VV+ N V P ++ E++ GN+ T V L
Sbjct: 309 LTLLKEMLLEFEKAIDA-VVVENAVEGTTFPASMMYELLGKANFTYGNVAT---IVSLLD 364
Query: 215 RFIEYLKTRLRVQQVVQESPATFLKDISSKPAPSMISEAYRYIFSTEEHLKTRL 268
+ ++YL + QQ+ TF +M+S+ +F+ +E + +++
Sbjct: 365 KLVQYL--LVASQQMTIRKGGTF----------TMLSDLLTIVFANKEDVMSKV 406
Score = 73.6 bits (179), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 706 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 765
P + I L ++G+ L +CPYF +R+ + A I Y+YLLDPK EL +++
Sbjct: 190 GPSIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELG-NTI 248
Query: 766 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 798
V+ DEAHNI+ +C +S SV+I + A+ ++
Sbjct: 249 VILDEAHNIEKICEESASVQIKSSDVAMAIEDV 281
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 48/155 (30%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM--- 483
+I +PV FP+E YP Q AYM ++ + L + +LE P+GTGKT SLL +A++
Sbjct: 5 LIAGIPVHFPFE-PYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTR 63
Query: 484 ------------------------------------NAHPLDVTKLLYCSRTVPEIEKVV 507
A+ V K++Y SRT ++ + +
Sbjct: 64 QSEHQQQMVKMEKADFTGLGGGAAGGDLSELAKTMGRANNWGVPKVIYASRTHSQLTQAM 123
Query: 508 EELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSE 542
EL R NM +VL SR LCIH E
Sbjct: 124 RELKR--------TAYANMRSVVLGSRDQLCIHPE 150
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S + RD+ I + GQ +++++ +VPDG++ FF SY L V +W G+ ++
Sbjct: 526 LISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISV 585
Query: 640 RKLLFIE 646
+K +F+E
Sbjct: 586 KKPIFLE 592
Score = 38.1 bits (87), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 541 SEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYL 580
S + RD+ I + GQ +++++ +VPDG++ FF SY L
Sbjct: 528 SNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPML 567
>sp|B3NSW1|RTEL1_DROER Regulator of telomere elongation helicase 1 homolog OS=Drosophila
erecta GN=GG18780 PE=3 SV=1
Length = 985
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 51 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 110
P + I L ++G+ L +CPYF +R+ + A I Y+YLLDPK EL +++
Sbjct: 190 GPSIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELG-NTI 248
Query: 111 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 143
V+ DEAHNI+ +C +S SV+I + A+ ++
Sbjct: 249 VILDEAHNIEKICEESASVQIKSSDVAMAIEDV 281
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 706 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 765
P + I L ++G+ L +CPYF +R+ + A I Y+YLLDPK EL +++
Sbjct: 190 GPSIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELG-NTI 248
Query: 766 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 798
V+ DEAHNI+ +C +S SV+I + A+ ++
Sbjct: 249 VILDEAHNIEKICEESASVQIKSSDVAMAIEDV 281
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 48/155 (30%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM--- 483
+I +PV FP+E YP Q AYM ++ + L + +LE P+GTGKT SLL +A++
Sbjct: 5 LIAGIPVHFPFE-PYPVQRAYMEKVIQCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTR 63
Query: 484 ------------------------------------NAHPLDVTKLLYCSRTVPEIEKVV 507
A+ V K++Y SRT ++ + +
Sbjct: 64 QSEHQQQMVKIEKADFSGLAGGATGGELSDLGKTMGRANNWGVPKVIYASRTHSQLTQAM 123
Query: 508 EELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSE 542
EL R NM +VL SR LCIH E
Sbjct: 124 RELKR--------TAYANMRSVVLGSRDQLCIHPE 150
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S + RD+ I + GQ +++++ +VPDG++ FF SY L V +W G+ ++
Sbjct: 526 LISNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISC 585
Query: 640 RKLLFIE 646
+K +F+E
Sbjct: 586 KKPIFLE 592
Score = 40.0 bits (92), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 541 SEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLL 600
S + RD+ I + GQ +++++ +VPDG++ FF SY L + L
Sbjct: 528 SNYANRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVDA-------WQASGLW 580
Query: 601 VDIACVVP 608
DI+C P
Sbjct: 581 ADISCKKP 588
>sp|Q9W484|RTEL1_DROME Regulator of telomere elongation helicase 1 homolog OS=Drosophila
melanogaster GN=CG4078 PE=1 SV=1
Length = 985
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 51 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 110
P + I L ++G+ L +CPYF +R+ + A I Y+YLLDPK EL +++
Sbjct: 190 GPTIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELG-NTI 248
Query: 111 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 143
V+ DEAHNI+ +C +S SV+I + A+ ++
Sbjct: 249 VILDEAHNIEKICEESASVQIKSSDVAMAIEDV 281
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 706 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 765
P + I L ++G+ L +CPYF +R+ + A I Y+YLLDPK EL +++
Sbjct: 190 GPTIMDIEDLVKVGQRLKICPYFASRELVPQADITFMPYNYLLDPKARKANKIELG-NTI 248
Query: 766 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 798
V+ DEAHNI+ +C +S SV+I + A+ ++
Sbjct: 249 VILDEAHNIEKICEESASVQIKSSDVAMAIEDV 281
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 65/155 (41%), Gaps = 48/155 (30%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM--- 483
+I +PV FP+E YP Q AYM ++ L + +LE P+GTGKT SLL +A++
Sbjct: 5 LIAGIPVHFPFE-PYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTR 63
Query: 484 ------------------------------------NAHPLDVTKLLYCSRTVPEIEKVV 507
A+ V K++Y SRT ++ + +
Sbjct: 64 QSEHQKQMVKMEKADFSGLGGGAPGGDLSELAKTMGRANNWGVPKVIYASRTHSQLTQAM 123
Query: 508 EELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSE 542
EL R NM +VL SR LCIH E
Sbjct: 124 RELKR--------TAYANMRSVVLGSRDQLCIHPE 150
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S + RD+ I + GQ ++++A +VPDG++ FF SY L V +W G+ ++
Sbjct: 526 LISNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISC 585
Query: 640 RKLLFIE 646
+K +F+E
Sbjct: 586 KKPIFLE 592
Score = 41.2 bits (95), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 541 SEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLL 600
S + RD+ I + GQ ++++A +VPDG++ FF SY L + L
Sbjct: 528 SNYANRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDA-------WQASGLW 580
Query: 601 VDIACVVP 608
DI+C P
Sbjct: 581 ADISCKKP 588
>sp|P0C928|RTEL1_DANRE Regulator of telomere elongation helicase 1 OS=Danio rerio GN=rtel1
PE=3 SV=1
Length = 1177
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 35 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 94
C FY D + + + + L + G++ +CPY+L+R HA ++ Y+YLLD
Sbjct: 172 CIFYNNVDEKSTDKEIVNSILDVEDLVKTGKKQRVCPYYLSRSLKQHADVIFMPYNYLLD 231
Query: 95 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKE-- 152
PK + EL + +VV+FDEAHN++ +C +S S + T + I+ ++ L+E
Sbjct: 232 PKSRRAHNIEL-KGAVVIFDEAHNVEKMCEESTSFDL---TPHDLISAIEAVDRLLREQA 287
Query: 153 --MKEADSAK 160
+ +ADSA+
Sbjct: 288 SDISKADSAE 297
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 8/130 (6%)
Query: 690 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 749
C FY D + + + + L + G++ +CPY+L+R HA ++ Y+YLLD
Sbjct: 172 CIFYNNVDEKSTDKEIVNSILDVEDLVKTGKKQRVCPYYLSRSLKQHADVIFMPYNYLLD 231
Query: 750 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKE-- 807
PK + EL + +VV+FDEAHN++ +C +S S + T + I+ ++ L+E
Sbjct: 232 PKSRRAHNIEL-KGAVVIFDEAHNVEKMCEESTSFDL---TPHDLISAIEAVDRLLREQA 287
Query: 808 --MKEADSAK 815
+ +ADSA+
Sbjct: 288 SDISKADSAE 297
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 557 QLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFT 616
Q+ V I PDGV L + F+ R + + G LV+++ VVP G++ FF
Sbjct: 509 QIFVSIIEKGPDGV--------QLSTAFDRRFVPENMSSMGNTLVNLSRVVPHGLLVFFP 560
Query: 617 SYLYLESVVASWYDQGIIDNLQKRKLLFIETQDALDSRSVSKERDGKIVDGRCHSLTSSS 676
SY ++ + W +G D ++ K +F+E + V GK+ D + +
Sbjct: 561 SYPVMDKTLEFWRAKGHADRIENVKPMFVEPRGKGTFTEVIDGYYGKVDDPNSSGGSFFA 620
Query: 677 VRDRHKAGENIPVCDFYEK 695
V R KA E + D Y +
Sbjct: 621 V-CRGKASEGLDFADTYGR 638
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 49/156 (31%)
Query: 426 LMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYMNA 485
+ + + V FP+ YP Q YM ++ + L K + +LE P+GTGKT LL +A+ +
Sbjct: 4 IKLKGINVDFPFT-PYPCQEDYMSKVIECLQKKVNGVLESPTGTGKTLCLLCSTLAWRDH 62
Query: 486 ----------------------HPL-----------------DVTKLLYCSRTVPEIEKV 506
P+ D+ K++Y SRT ++ +V
Sbjct: 63 FKDTISARKITERMGGAELFADRPMSSWGTAATDGDTPTYYTDIPKIIYASRTHSQLTQV 122
Query: 507 VEELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSE 542
V EL N VL SR+ LCI+ E
Sbjct: 123 VNELK---------NTSYRPKICVLGSREQLCINQE 149
Score = 38.5 bits (88), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 849 ILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYL 883
+++ + DYG + D RF +D R++LP W++ Y+
Sbjct: 697 VIRHREDYGAIFLCDHRFKSADARNQLPSWVRPYV 731
>sp|B3MSG8|RTEL1_DROAN Regulator of telomere elongation helicase 1 homolog OS=Drosophila
ananassae GN=GF20802 PE=3 SV=1
Length = 994
Score = 72.0 bits (175), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 149/355 (41%), Gaps = 75/355 (21%)
Query: 51 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 110
P + I L ++G++L +CPY+ +++ + A I Y+YLLDPK EL +++
Sbjct: 190 GPSIMDIEDLIKVGQKLKMCPYYASKELVPQADITFMPYNYLLDPKARKANKIELG-NTI 248
Query: 111 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLR------EE 164
V+ DEAHNI+ +C +S SV+I + A+ ++ + D A ++
Sbjct: 249 VILDEAHNIEKICEESASVQIKSSDVAIAIEDVTHIMKAFASDSPQDMAGDEPKDFTIDD 308
Query: 165 YARLVEGLRDAQSARETDVVLANPV----LPDEILQEVVP------GNIRTAEHFVGFLK 214
L E L D + A + V + NP+ P ++ E++ GN+ T V L
Sbjct: 309 LMLLKEMLLDLEKAIDA-VAVDNPIDGATYPASMIYELLGKANFTYGNVAT---IVALLD 364
Query: 215 RFIEYLKTRLRVQQVVQESPATFLKDISSKPAPSMISEAYRYIFSTEEHLKTRLRVQQVV 274
+ ++YL + QQ+ +F +++S+ +F+ +E + ++
Sbjct: 365 KLVQYLMVASQ-QQMSLRKGGSF----------TLLSDLLTIVFANKESVMGKVH----- 408
Query: 275 QESPATFLKDISSKVCIERKPLRFCAERLASLLRTLEITNLTDFSSLVVITHLATLVSSY 334
A+F + + + + + A++ L +TN
Sbjct: 409 ----ASFKVHVQVEESKQPQGKQAPAKQAGGWLSKASLTN------------------GS 446
Query: 335 TKGFAIIVEPFSDKAPTVPNPVLYFCCLDSSLAIKPVFD-RFQTVVITSGTLSPL 388
T A I+ F C + ++ + + + ++V++TSGTL+PL
Sbjct: 447 TGKVAKIIN---------------FWCFNPGFGMEQLLNTQVRSVILTSGTLAPL 486
Score = 70.5 bits (171), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 706 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 765
P + I L ++G++L +CPY+ +++ + A I Y+YLLDPK EL +++
Sbjct: 190 GPSIMDIEDLIKVGQKLKMCPYYASKELVPQADITFMPYNYLLDPKARKANKIELG-NTI 248
Query: 766 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 798
V+ DEAHNI+ +C +S SV+I + A+ ++
Sbjct: 249 VILDEAHNIEKICEESASVQIKSSDVAIAIEDV 281
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 48/155 (30%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM--- 483
+I +PV FP+E YP Q AYM ++ + L + +LE P+GTGKT SLL +A++
Sbjct: 5 LIAGIPVHFPFE-PYPVQRAYMEKVIQCLKDGTNGVLESPTGTGKTLSLLCSSLAWIRTR 63
Query: 484 ------------------------------------NAHPLDVTKLLYCSRTVPEIEKVV 507
A+ V K++Y SRT ++ + +
Sbjct: 64 QSEHQQQMIKLDKGADLLGGGAGGGPELSDLAKTMGKANNWGVPKVIYASRTHSQLTQAM 123
Query: 508 EELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSE 542
EL R NM +VL SR LCIH E
Sbjct: 124 RELKR--------TAYSNMRSVVLGSRDQLCIHPE 150
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S + RD+ I + GQ +++++ +VPDG++ FF SY L V +W G+ ++
Sbjct: 526 LISNYTNRDNPKYISSLGQTILNVSRLVPDGLLVFFPSYPMLNKCVDAWQASGLWADIAS 585
Query: 640 RKLLFIE 646
+K +F+E
Sbjct: 586 KKPIFLE 592
Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 541 SEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYL 580
S + RD+ I + GQ +++++ +VPDG++ FF SY L
Sbjct: 528 SNYTNRDNPKYISSLGQTILNVSRLVPDGLLVFFPSYPML 567
>sp|Q6H1L8|RTEL1_MUSSP Regulator of telomere elongation helicase 1 OS=Mus spretus GN=Rtel1
PE=2 SV=1
Length = 1203
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 35 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 94
C FY +A E LA + I L + G + +CPY+L+R A I+ Y+YLLD
Sbjct: 172 CHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLD 231
Query: 95 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI-QTLEGTLKEM 153
K S +L + +VV+FDEAHN++ +C +S S + R + + I Q LE ++
Sbjct: 232 AKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLE---EQA 287
Query: 154 KEADSAKLREEY 165
+ +L++E+
Sbjct: 288 RVTQQGELQQEF 299
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 690 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 749
C FY +A E LA + I L + G + +CPY+L+R A I+ Y+YLLD
Sbjct: 172 CHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLD 231
Query: 750 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI-QTLEGTLKEM 808
K S +L + +VV+FDEAHN++ +C +S S + R + + I Q LE ++
Sbjct: 232 AKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLE---EQA 287
Query: 809 KEADSAKLREEY 820
+ +L++E+
Sbjct: 288 RVTQQGELQQEF 299
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 552 IRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGV 611
I + QL V I PDGV L S ++ R + + G+ L +IA VVP G+
Sbjct: 505 IIDKNQLWVGIVPRGPDGV--------QLSSAYDKRFSEECLSSLGKALSNIARVVPHGL 556
Query: 612 VCFFTSYLYLESVVASWYDQGIIDNLQKRKLLFIETQD 649
+ FF SY +E + W QG+ ++ K LF+E ++
Sbjct: 557 LVFFPSYPVMEKSLEFWQVQGLARKVEALKPLFVEPRN 594
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 49/161 (30%)
Query: 426 LMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYMN- 484
++++ + V FP++ YP Q YM ++ + L K + +LE P+GTGKT LL +A+
Sbjct: 4 VVLNGVTVDFPFQ-PYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQH 62
Query: 485 --------------------AHPL------------------DVTKLLYCSRTVPEIEKV 506
+ L D+ K++Y SRT + +V
Sbjct: 63 LRDAISSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQPTQV 122
Query: 507 VEELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSEFETRD 547
+ EL N VL SR+ LCIH E + ++
Sbjct: 123 IREL---------RNTAYRPKVCVLGSREQLCIHPEVKKQE 154
Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 849 ILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYLT--DNLTN 889
+++ + DYG + D RFA +D R++LP W++ YL DN +
Sbjct: 698 VIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGH 740
>sp|B4M891|RTEL1_DROVI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
virilis GN=GJ16649 PE=3 SV=1
Length = 1005
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 51 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 110
P + I L ++G+ L +CPYF +++ + A I Y+YLLDPK EL+ +++
Sbjct: 189 GPSIMDIEDLVKVGQRLKMCPYFASKELVNGADITFMPYNYLLDPKARKANKIELS-NTI 247
Query: 111 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 143
V+ DEAHNI+ +C +S SV+I + A+ +I
Sbjct: 248 VILDEAHNIEKICEESASVQIRSSDVAMAIEDI 280
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 706 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 765
P + I L ++G+ L +CPYF +++ + A I Y+YLLDPK EL+ +++
Sbjct: 189 GPSIMDIEDLVKVGQRLKMCPYFASKELVNGADITFMPYNYLLDPKARKANKIELS-NTI 247
Query: 766 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 798
V+ DEAHNI+ +C +S SV+I + A+ +I
Sbjct: 248 VILDEAHNIEKICEESASVQIRSSDVAMAIEDI 280
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 64/154 (41%), Gaps = 47/154 (30%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM--- 483
+I +PV FP+E Y Q AYM ++ L + +LE P+GTGKT SLL +A++
Sbjct: 5 IIAGIPVHFPFE-PYEVQRAYMEKVIMCLRDGTNGVLESPTGTGKTLSLLCASLAWIRTR 63
Query: 484 -----------------------------------NAHPLDVTKLLYCSRTVPEIEKVVE 508
A+ V K++Y SRT ++ + +
Sbjct: 64 QSEQQQYMQKLQLDQQKQATGGAGAGVADLNAVMGKANNWGVPKVIYASRTHSQLSQAMR 123
Query: 509 ELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSE 542
EL R NM +VL SR LCIH +
Sbjct: 124 ELKR--------TAYANMKSVVLGSRDQLCIHPD 149
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S ++ RD+ I + GQ +++++ +VPDG++ FF SY L V +W G+ ++
Sbjct: 526 LISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVDAWQASGLWADISC 585
Query: 640 RKLLFIE 646
RK +F+E
Sbjct: 586 RKPIFLE 592
Score = 40.8 bits (94), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 18/132 (13%)
Query: 483 MNAHPLDVTKLLYCSRTVPEIEKVVEELARLFDYYIKHNEEINMTGLVLS------SRKN 536
+NAH V ++ S T+ ++ ++ ELA ++++ ++ + + + R+
Sbjct: 469 LNAH---VRSVILTSGTLAPLKPLIAELAIPVAQHLENPHIVDRSQVYVKIIGTGPDREQ 525
Query: 537 LCIHSEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNY 596
L S ++ RD+ I + GQ +++++ +VPDG++ FF SY L +
Sbjct: 526 LI--SNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVDA-------WQA 576
Query: 597 GQLLVDIACVVP 608
L DI+C P
Sbjct: 577 SGLWADISCRKP 588
>sp|Q0VGM9|RTEL1_MOUSE Regulator of telomere elongation helicase 1 OS=Mus musculus
GN=Rtel1 PE=2 SV=2
Length = 1203
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 35 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 94
C FY +A E LA + I L + G + +CPY+L+R A I+ Y+YLLD
Sbjct: 172 CHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLD 231
Query: 95 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI-QTLEGTLKEM 153
K S +L + +VV+FDEAHN++ +C +S S + R + + I Q LE ++
Sbjct: 232 AKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLE---EQA 287
Query: 154 KEADSAKLREEY 165
+ +L++E+
Sbjct: 288 RVTQQGELQQEF 299
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 690 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 749
C FY +A E LA + I L + G + +CPY+L+R A I+ Y+YLLD
Sbjct: 172 CHFYNNVEAKFLEQDLATPILDIEDLVKNGSKQKMCPYYLSRNMKQQADIIFMPYNYLLD 231
Query: 750 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI-QTLEGTLKEM 808
K S +L + +VV+FDEAHN++ +C +S S + R + + I Q LE ++
Sbjct: 232 AKSRKAHSIDL-KGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEIINQVLE---EQA 287
Query: 809 KEADSAKLREEY 820
+ +L++E+
Sbjct: 288 RVTQQGELQQEF 299
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 552 IRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGV 611
I + QL V I PDGV L S ++ R + + G+ L +IA VVP G+
Sbjct: 505 IIDKNQLWVGIVPRGPDGV--------QLSSAYDKRFSEECLSSLGKALSNIARVVPHGL 556
Query: 612 VCFFTSYLYLESVVASWYDQGIIDNLQKRKLLFIETQD 649
+ FF SY +E + W QG+ ++ K LF+E ++
Sbjct: 557 LVFFPSYPVMEKSLEFWQVQGLARKVEALKPLFVEPRN 594
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 49/161 (30%)
Query: 426 LMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYMN- 484
++++ + V FP++ YP Q YM ++ + L K + +LE P+GTGKT LL +A+
Sbjct: 4 VVLNGVTVDFPFQ-PYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWQQH 62
Query: 485 --------------------AHPL------------------DVTKLLYCSRTVPEIEKV 506
+ L D+ K++Y SRT ++ +V
Sbjct: 63 LRDAVSSLKIAERVQGELFASRTLSSWGSAAAASGDSIECYTDIPKIIYASRTHSQLTQV 122
Query: 507 VEELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSEFETRD 547
+ EL N VL SR+ LCIH E + ++
Sbjct: 123 IREL---------RNTAYRPKVCVLGSREQLCIHPEVKKQE 154
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 849 ILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYLT--DNLTNL 890
+++ + DYG + D RFA +D R++LP W++ YL DN ++
Sbjct: 698 VIRHRHDYGAIFLCDHRFAYADARAQLPSWVRPYLKVYDNFGHV 741
>sp|B0W9F4|RTEL1_CULQU Regulator of telomere elongation helicase 1 homolog OS=Culex
quinquefasciatus GN=CPIJ003765 PE=3 SV=1
Length = 978
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 34 VCDFYEKFDAVGREAPLAPG--VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHY 91
C FY + +A +E P G + I L + +L CP+F++++ I +A ++ Y+Y
Sbjct: 185 ACSFYSRVEAC-KERPEITGSTIMDIEDLVRVSTKLKACPFFMSKELIENADVLFMPYNY 243
Query: 92 LLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTL 146
LLDPK + ELA +++++ DEAHN+D +C +S S++I I + ++ ++
Sbjct: 244 LLDPKARKANNLELA-NTIIILDEAHNVDKMCEESASMQIRSSDIALCIDDVTSI 297
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 689 VCDFYEKFDAVGREAPLAPG--VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHY 746
C FY + +A +E P G + I L + +L CP+F++++ I +A ++ Y+Y
Sbjct: 185 ACSFYSRVEAC-KERPEITGSTIMDIEDLVRVSTKLKACPFFMSKELIENADVLFMPYNY 243
Query: 747 LLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTL 801
LLDPK + ELA +++++ DEAHN+D +C +S S++I I + ++ ++
Sbjct: 244 LLDPKARKANNLELA-NTIIILDEAHNVDKMCEESASMQIRSSDIALCIDDVTSI 297
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S + RD+ I + G+ ++ ++P G++ FF SY L +W + GI + +
Sbjct: 536 LNSSYGNRDNPKYISSLGRTILSFCPIIPGGLLVFFPSYPLLNKCQEAWQETGIWAQISR 595
Query: 640 RKLLFIE 646
K +F+E
Sbjct: 596 TKPIFVE 602
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM 483
+I+ +PV FP+E Y Q YM + + L + +LE P+GTGKT SLL +A++
Sbjct: 5 LINGIPVNFPFEP-YQVQRDYMARVIECLQNSSNGVLESPTGTGKTLSLLCSSLAWI 60
Score = 35.8 bits (81), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 849 ILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYLT 884
+++ K DYG ++ D RF ++++L WIQ++L
Sbjct: 706 VIRHKNDYGAILLCDNRFHNPRQKAQLSSWIQKHLN 741
>sp|B4GU19|RTEL1_DROPE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
persimilis GN=GL14463 PE=3 SV=1
Length = 1009
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 51 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 110
P + I L +G++L +CPY+ +++ + A I Y+YLLDPK EL +++
Sbjct: 190 GPSIMDIEDLVRVGQKLKMCPYYASKELVAQADITFMPYNYLLDPKARKANKIELG-NTI 248
Query: 111 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 143
++ DEAHNI+ +C +S SV+I + A+ ++
Sbjct: 249 IILDEAHNIEKICEESASVQIRSSDVAMAIEDV 281
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 706 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 765
P + I L +G++L +CPY+ +++ + A I Y+YLLDPK EL +++
Sbjct: 190 GPSIMDIEDLVRVGQKLKMCPYYASKELVAQADITFMPYNYLLDPKARKANKIELG-NTI 248
Query: 766 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 798
++ DEAHNI+ +C +S SV+I + A+ ++
Sbjct: 249 IILDEAHNIEKICEESASVQIRSSDVAMAIEDV 281
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S F+ RD+ I + GQ ++++A +VPDG++ FF SY L V +W G+ ++
Sbjct: 527 LISNFKNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISC 586
Query: 640 RKLLFIE 646
+K +F+E
Sbjct: 587 KKPIFVE 593
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 63/155 (40%), Gaps = 48/155 (30%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM--- 483
+I +PV FP+E Y Q YM ++ L + +LE P+GTGKT SLL +A++
Sbjct: 5 VIAGIPVHFPFEP-YNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAWIRTR 63
Query: 484 ------------------------------------NAHPLDVTKLLYCSRTVPEIEKVV 507
A+ V K++Y SRT ++ + +
Sbjct: 64 QSEHQQQMIKLKATSKEGGPGSGPGGDLSELAMTVGQANNWGVPKVIYASRTHSQLNQAM 123
Query: 508 EELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSE 542
EL R NM +VL SR LCIH E
Sbjct: 124 RELKR--------TAYANMRSVVLGSRDQLCIHPE 150
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 541 SEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLL 600
S F+ RD+ I + GQ ++++A +VPDG++ FF SY L + L
Sbjct: 529 SNFKNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDA-------WQASGLW 581
Query: 601 VDIACVVP 608
DI+C P
Sbjct: 582 ADISCKKP 589
>sp|Q29FS3|RTEL1_DROPS Regulator of telomere elongation helicase 1 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA17940 PE=3 SV=2
Length = 1009
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 51 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 110
P + I L +G++L +CPY+ +++ + A I Y+YLLDPK EL +++
Sbjct: 190 GPSIMDIEDLVRVGQKLKMCPYYASKELVAQADITFMPYNYLLDPKARKANKIELG-NTI 248
Query: 111 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 143
++ DEAHNI+ +C +S SV+I + A+ ++
Sbjct: 249 IILDEAHNIEKICEESASVQIRSSDVAMAIEDV 281
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 706 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 765
P + I L +G++L +CPY+ +++ + A I Y+YLLDPK EL +++
Sbjct: 190 GPSIMDIEDLVRVGQKLKMCPYYASKELVAQADITFMPYNYLLDPKARKANKIELG-NTI 248
Query: 766 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 798
++ DEAHNI+ +C +S SV+I + A+ ++
Sbjct: 249 IILDEAHNIEKICEESASVQIRSSDVAMAIEDV 281
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S F+ RD+ I + GQ ++++A +VPDG++ FF SY L V +W G+ ++
Sbjct: 527 LISNFKNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISC 586
Query: 640 RKLLFIE 646
+K +F+E
Sbjct: 587 KKPIFVE 593
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 63/155 (40%), Gaps = 48/155 (30%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM--- 483
+I +PV FP+E Y Q YM ++ L + +LE P+GTGKT SLL +A++
Sbjct: 5 VIAGIPVHFPFEP-YNVQRDYMEKVIICLRDGTNGVLESPTGTGKTLSLLCASLAWIRTR 63
Query: 484 ------------------------------------NAHPLDVTKLLYCSRTVPEIEKVV 507
A+ V K++Y SRT ++ + +
Sbjct: 64 QSEHQQQMIKLKATSKEGGPGSGPGGDLSELAMTVGQANNWGVPKVIYASRTHSQLNQAM 123
Query: 508 EELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSE 542
EL R NM +VL SR LCIH E
Sbjct: 124 RELKR--------TAYANMRSVVLGSRDQLCIHPE 150
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
Query: 541 SEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLL 600
S F+ RD+ I + GQ ++++A +VPDG++ FF SY L + L
Sbjct: 529 SNFKNRDNPKYISSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDA-------WQASGLW 581
Query: 601 VDIACVVP 608
DI+C P
Sbjct: 582 ADISCKKP 589
>sp|B4L1Z2|RTEL1_DROMO Regulator of telomere elongation helicase 1 homolog OS=Drosophila
mojavensis GN=GI15901 PE=3 SV=1
Length = 1014
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 51 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 110
P + I L ++G+ L +CPY+ +++ + A I Y+YLLDPK EL+ +++
Sbjct: 191 GPSIMDIEDLVKVGQRLKMCPYYASKELVSSADITFMPYNYLLDPKARKANKIELS-NTI 249
Query: 111 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLRE 163
V+ DEAHNI+ +C +S SV+I + A+ ++ + DS E
Sbjct: 250 VILDEAHNIEKICEESASVQIRSSDVAMAIEDVTHIMKIFTSADSQDSGGPEE 302
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 706 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 765
P + I L ++G+ L +CPY+ +++ + A I Y+YLLDPK EL+ +++
Sbjct: 191 GPSIMDIEDLVKVGQRLKMCPYYASKELVSSADITFMPYNYLLDPKARKANKIELS-NTI 249
Query: 766 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLRE 818
V+ DEAHNI+ +C +S SV+I + A+ ++ + DS E
Sbjct: 250 VILDEAHNIEKICEESASVQIRSSDVAMAIEDVTHIMKIFTSADSQDSGGPEE 302
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S ++ RD+ I + GQ +++++ +VPDG++ FF SY L V +W G+ +L
Sbjct: 527 LISNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNQCVDAWQASGLWADLSS 586
Query: 640 RKLLFIE 646
RK +F+E
Sbjct: 587 RKPIFLE 593
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 64/156 (41%), Gaps = 49/156 (31%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM--- 483
+I +PV FP+E Y Q A+M ++ L + +LE P+GTGKT SLL +A++
Sbjct: 5 IIAGIPVHFPFE-PYEVQRAFMEKVIMCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTR 63
Query: 484 -------------------------------------NAHPLDVTKLLYCSRTVPEIEKV 506
A+ V K++Y SRT ++ +
Sbjct: 64 QSEHQINMQKLQMEQQQRQATGGSATGAISDLALTMGKANNWGVPKVIYASRTHSQLTQA 123
Query: 507 VEELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSE 542
+ EL R +M +VL SR LCIH +
Sbjct: 124 MRELKR--------TAYASMRSVVLGSRDQLCIHPD 151
Score = 38.9 bits (89), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 27/40 (67%)
Query: 541 SEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYL 580
S ++ RD+ I + GQ +++++ +VPDG++ FF SY L
Sbjct: 529 SNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPML 568
>sp|Q93575|RTEL1_CAEEL Regulator of telomere elongation helicase 1 homolog
OS=Caenorhabditis elegans GN=rtel-1 PE=3 SV=3
Length = 994
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 5/107 (4%)
Query: 34 VCDFYEKFDAVGREAP---LAPG-VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSY 89
C +Y KFDA + L G I ++G + LCPYF++RQ A++++ Y
Sbjct: 168 ACHYYNKFDACTTDKMTEFLDKGEAMDIEDFVKLGTQNSLCPYFMSRQRSETAELILLPY 227
Query: 90 HYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTI 136
+Y++DPK+ +L ++S+V+FDEAHN++++C + S + +I
Sbjct: 228 NYIIDPKMRRRYKLDL-KNSIVIFDEAHNLESICESNASAELTSTSI 273
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 5/107 (4%)
Query: 689 VCDFYEKFDAVGREAP---LAPG-VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSY 744
C +Y KFDA + L G I ++G + LCPYF++RQ A++++ Y
Sbjct: 168 ACHYYNKFDACTTDKMTEFLDKGEAMDIEDFVKLGTQNSLCPYFMSRQRSETAELILLPY 227
Query: 745 HYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTI 791
+Y++DPK+ +L ++S+V+FDEAHN++++C + S + +I
Sbjct: 228 NYIIDPKMRRRYKLDL-KNSIVIFDEAHNLESICESNASAELTSTSI 273
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 61/139 (43%), Gaps = 36/139 (25%)
Query: 431 LPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYMN----AH 486
L V FP+E Y Q +M + LD K LE P+GTGKT SLL +A++
Sbjct: 17 LSVKFPFE-PYECQRIFMKNVVDVLDRKLDAALESPTGTGKTLSLLCSTLAWVQRQKETK 75
Query: 487 PLD-----------------------VTKLLYCSRTVPEIEKVVEELARLFDYYIKHNEE 523
PLD V + Y SRT ++E+VV EL R ++K
Sbjct: 76 PLDFATWQTSGAGGAEKTDEKLKSAYVPTIFYASRTHSQLEQVVHELNRTEYKWVKTT-- 133
Query: 524 INMTGLVLSSRKNLCIHSE 542
+L SR++ CI+ +
Sbjct: 134 ------ILGSREHFCINQK 146
Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 29/49 (59%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASW 628
L F+ R ++ + + L+ + V+P G++ FF+SY ++ +VA+W
Sbjct: 536 LAGSFQNRKNLDYVTGVAEALLRVMEVIPQGILIFFSSYSQMDELVATW 584
>sp|A8WS58|RTEL1_CAEBR Regulator of telomere elongation helicase 1 homolog
OS=Caenorhabditis briggsae GN=rtel-1 PE=3 SV=1
Length = 994
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
Query: 35 CDFYEKFDAVGREAP---LAPG-VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYH 90
C +Y KFDA+ + L G I ++G + +CPYF++RQ A++++ Y+
Sbjct: 169 CHYYNKFDALTTDKANEILEKGEAMDIEDFVKIGTQNSICPYFMSRQRSETAELILLPYN 228
Query: 91 YLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTI 136
Y++DPK+ +L ++S+V+FDEAHN++++C + S ++ +I
Sbjct: 229 YIIDPKMRRRYKLDL-KNSIVIFDEAHNLESICESNASAELSSTSI 273
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
Query: 690 CDFYEKFDAVGREAP---LAPG-VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYH 745
C +Y KFDA+ + L G I ++G + +CPYF++RQ A++++ Y+
Sbjct: 169 CHYYNKFDALTTDKANEILEKGEAMDIEDFVKIGTQNSICPYFMSRQRSETAELILLPYN 228
Query: 746 YLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTI 791
Y++DPK+ +L ++S+V+FDEAHN++++C + S ++ +I
Sbjct: 229 YIIDPKMRRRYKLDL-KNSIVIFDEAHNLESICESNASAELSSTSI 273
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 60/135 (44%), Gaps = 36/135 (26%)
Query: 435 FPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYMN----AHPLD- 489
FP+E Y Q +M + LD K LE P+GTGKT SLL +A++ + P+D
Sbjct: 21 FPFE-PYECQRIFMKNVIDVLDMKLDAALESPTGTGKTLSLLCSTLAWVQKLKESKPMDF 79
Query: 490 ----------------------VTKLLYCSRTVPEIEKVVEELARLFDYYIKHNEEINMT 527
+ + Y SRT ++E+VV EL R ++K
Sbjct: 80 ATWQSSGAGGAEKTEDKLKNSFIPTIFYASRTHSQLEQVVHELNRTEYKWVKTT------ 133
Query: 528 GLVLSSRKNLCIHSE 542
+L SR++ CI+ +
Sbjct: 134 --ILGSREHFCINQK 146
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 584 FETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASW 628
F+ R +I + + G+ L+ + P GV+ FF+SY ++ +V W
Sbjct: 538 FQNRKNIEYVSDVGESLIRVMETTPQGVLVFFSSYSQMDELVEVW 582
Score = 35.0 bits (79), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 526 MTGLVLSSRKNLCIHSEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFE 585
+T +V + + S F+ R +I + + G+ L+ + P GV+ FF+SY ++ + E
Sbjct: 522 LTSIVTRGKHGGLVGS-FQNRKNIEYVSDVGESLIRVMETTPQGVLVFFSSYSQMDELVE 580
>sp|Q5RJZ1|RTEL1_RAT Regulator of telomere elongation helicase 1 OS=Rattus norvegicus
GN=Rtel1 PE=2 SV=2
Length = 1274
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 35 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 94
C FY + E LA + I L + G + +CPY+L+R A I+ Y+YLLD
Sbjct: 172 CHFYNNVEEKSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNLKQQADIIFMPYNYLLD 231
Query: 95 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI-QTLEGTLKEM 153
K + +L + +VV+FDEAHN++ +C +S S + R + + I Q LE ++
Sbjct: 232 AKSRKAHNIDL-KGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEVINQVLE---EQA 287
Query: 154 KEADSAKLREEY 165
+ A +L++E+
Sbjct: 288 RVAQHGELQQEF 299
Score = 70.1 bits (170), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 5/132 (3%)
Query: 690 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 749
C FY + E LA + I L + G + +CPY+L+R A I+ Y+YLLD
Sbjct: 172 CHFYNNVEEKSLEQELATPILDIEDLVKNGSKHKVCPYYLSRNLKQQADIIFMPYNYLLD 231
Query: 750 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI-QTLEGTLKEM 808
K + +L + +VV+FDEAHN++ +C +S S + R + + I Q LE ++
Sbjct: 232 AKSRKAHNIDL-KGTVVIFDEAHNVEKICEESASFDLTPRDVASGLEVINQVLE---EQA 287
Query: 809 KEADSAKLREEY 820
+ A +L++E+
Sbjct: 288 RVAQHGELQQEF 299
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 552 IRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGV 611
I + QL V + PDGV L S ++ R + + G+ L +IA VVP G+
Sbjct: 505 IIDKNQLWVGVIPRGPDGV--------QLSSAYDKRFSEECLSSLGKALGNIARVVPHGL 556
Query: 612 VCFFTSYLYLESVVASWYDQGIIDNLQKRKLLFIETQD 649
+ FF SY +E + W QG+ ++ K LF+E ++
Sbjct: 557 LVFFPSYPVMEKSLEFWQAQGMSKKVEALKPLFVEPRN 594
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 68/161 (42%), Gaps = 49/161 (30%)
Query: 426 LMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAY--- 482
++++ + V FP++ YP Q YM ++ + L K + +LE P+GTGKT LL +A+
Sbjct: 4 VVLNGVTVDFPFQ-PYPCQQEYMTKVLECLQKKVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 483 --------------------------------MNAHPL----DVTKLLYCSRTVPEIEKV 506
N + D+ K++Y SRT ++ +V
Sbjct: 63 LRDAVSSLKIAERVQGELFASRTLSSWRSAADANGDSIDCYTDIPKIIYASRTHSQLTQV 122
Query: 507 VEELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSEFETRD 547
+ EL N VL SR+ LCIH E + ++
Sbjct: 123 IGEL---------RNTSYRPKVCVLGSREQLCIHPEVKKQE 154
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 849 ILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYL 883
+++ + DYG + D RFA +D R+ LP W++ YL
Sbjct: 698 VIRHRHDYGAIFLCDHRFAYADARAHLPSWVRPYL 732
>sp|B4JNS2|RTEL1_DROGR Regulator of telomere elongation helicase 1 homolog OS=Drosophila
grimshawi GN=GH24089 PE=3 SV=1
Length = 986
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 51 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 110
P + I L ++G+ L +CPYF +++ + A I Y+YLLDPK EL+ +++
Sbjct: 192 GPSIMDIEDLVKVGQRLKMCPYFASKELVNSADITFMPYNYLLDPKARKANKIELS-NAI 250
Query: 111 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 143
V+ DE HNI+ +C +S SV+I + A+ ++
Sbjct: 251 VILDEGHNIEKICEESASVQIRSSDVAIAIEDV 283
Score = 69.3 bits (168), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 706 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 765
P + I L ++G+ L +CPYF +++ + A I Y+YLLDPK EL+ +++
Sbjct: 192 GPSIMDIEDLVKVGQRLKMCPYFASKELVNSADITFMPYNYLLDPKARKANKIELS-NAI 250
Query: 766 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 798
V+ DE HNI+ +C +S SV+I + A+ ++
Sbjct: 251 VILDEGHNIEKICEESASVQIRSSDVAIAIEDV 283
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 552 IRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGV 611
I N Q+ V I PD L S ++ RD+ I + GQ +++++ +VPDG+
Sbjct: 507 IVNEAQVYVKIIGTGPD--------REQLISNYKNRDNPKYISSLGQTILNVSRIVPDGL 558
Query: 612 VCFFTSYLYLESVVASWYDQGIIDNLQKRKLLFIE 646
+ FF SY L V +W G+ ++ RK +F+E
Sbjct: 559 LVFFPSYPMLNQCVDAWQASGLWADISSRKPIFLE 593
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 63/157 (40%), Gaps = 50/157 (31%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM--- 483
+I +PV FP+E Y Q AYM ++ L + +LE P+GTGKT SLL + ++
Sbjct: 5 IIAGIPVHFPFE-PYDVQRAYMEKVIICLRDGTNGVLESPTGTGKTLSLLCSTLGWIRTR 63
Query: 484 --------------------------------------NAHPLDVTKLLYCSRTVPEIEK 505
++ V K++Y SRT ++ +
Sbjct: 64 QSEVQLNMQKLQHDQQTQLTGAAGAGAAMGSEIAAVIGKSNNWGVPKVIYASRTHSQLTQ 123
Query: 506 VVEELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSE 542
+ EL R NM +VL SR LCIH +
Sbjct: 124 AMRELKR--------TAYANMRAVVLGSRDQLCIHPD 152
Score = 38.9 bits (89), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 541 SEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLE 581
S ++ RD+ I + GQ +++++ +VPDG++ FF SY L
Sbjct: 529 SNYKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLN 569
>sp|B4NDG5|RTEL1_DROWI Regulator of telomere elongation helicase 1 homolog OS=Drosophila
willistoni GN=GK24923 PE=3 SV=1
Length = 998
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 51 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 110
P + I L ++G++L +CPYF +++ + A I Y+YLLDP EL+ +++
Sbjct: 192 GPSIMDIEDLVKVGQKLKMCPYFASKELVNDADITFMPYNYLLDPMARKANKIELS-NTI 250
Query: 111 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 143
V+ DEAHNI+ +C +S SV+I + A+ ++
Sbjct: 251 VILDEAHNIEKICEESASVQIKSSDVAVAIEDV 283
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 706 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 765
P + I L ++G++L +CPYF +++ + A I Y+YLLDP EL+ +++
Sbjct: 192 GPSIMDIEDLVKVGQKLKMCPYFASKELVNDADITFMPYNYLLDPMARKANKIELS-NTI 250
Query: 766 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI 798
V+ DEAHNI+ +C +S SV+I + A+ ++
Sbjct: 251 VILDEAHNIEKICEESASVQIKSSDVAVAIEDV 283
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S F+ RD+ I + GQ +++++ +VPDG++ FF SY L V +W G+ ++
Sbjct: 532 LISNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPMLNKCVDAWQTSGLWADIAA 591
Query: 640 RKLLFIE 646
+K +F+E
Sbjct: 592 KKPIFLE 598
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 64/157 (40%), Gaps = 50/157 (31%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM--- 483
+I +PV FP+E Y Q A+M ++ L + +LE P+GTGKT SLL +A++
Sbjct: 5 IIAGIPVHFPFE-PYEVQRAFMEKVIICLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTR 63
Query: 484 --------------------------------------NAHPLDVTKLLYCSRTVPEIEK 505
A+ V K++Y SRT ++ +
Sbjct: 64 QSEQQKQIRKLQDAANNTKVGPTGIVPGEAAELALTVGKANNWGVPKVIYASRTHSQLTQ 123
Query: 506 VVEELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSE 542
+ EL R + M +VL SR LCIH E
Sbjct: 124 AMRELKR--------SAYAGMRSVVLGSRDQLCIHPE 152
Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 541 SEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYL 580
S F+ RD+ I + GQ +++++ +VPDG++ FF SY L
Sbjct: 534 SNFKNRDNPKYISSLGQTILNVSRIVPDGLLVFFPSYPML 573
>sp|Q3YK19|FANCJ_CHICK Fanconi anemia group J protein homolog OS=Gallus gallus GN=BRIP1
PE=2 SV=1
Length = 1252
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 15 HSLTSSSVRDRHK------AGENIPVCDFYEKFDAVGREAPLAPG-----VYSITKLKEM 63
H + SSS +R++ G++ C +Y + L + I L +
Sbjct: 294 HPVVSSSNSNRNELCVELLEGKHGKSCLYYHGVHKLSEHYALQSAHNTYQAWDIEDLVSL 353
Query: 64 GRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVC 123
G++L CPYF AR+ ++ A IV Y+YLLDP+I + L + VV+ DEAHNI++
Sbjct: 354 GKKLRACPYFAARELMVGADIVFCPYNYLLDPQIRESMEINL-KGQVVILDEAHNIEDSA 412
Query: 124 VDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQS 177
+++S + + A + + +++ D +LR L LR++ S
Sbjct: 413 REAVSYSVTESQLNAAREELDFMVNN--NIRQKDHEQLRAMCCSLTNWLRESSS 464
Score = 67.8 bits (164), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 14/174 (8%)
Query: 670 HSLTSSSVRDRHK------AGENIPVCDFYEKFDAVGREAPLAPG-----VYSITKLKEM 718
H + SSS +R++ G++ C +Y + L + I L +
Sbjct: 294 HPVVSSSNSNRNELCVELLEGKHGKSCLYYHGVHKLSEHYALQSAHNTYQAWDIEDLVSL 353
Query: 719 GRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVC 778
G++L CPYF AR+ ++ A IV Y+YLLDP+I + L + VV+ DEAHNI++
Sbjct: 354 GKKLRACPYFAARELMVGADIVFCPYNYLLDPQIRESMEINL-KGQVVILDEAHNIEDSA 412
Query: 779 VDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQS 832
+++S + + A + + +++ D +LR L LR++ S
Sbjct: 413 REAVSYSVTESQLNAAREELDFMVNN--NIRQKDHEQLRAMCCSLTNWLRESSS 464
Score = 47.0 bits (110), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 428 IDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYMNA 485
I + + FP + YP Q A M + K L+ + HCLLE P+G+GK+ +LL +++ +
Sbjct: 10 IGGVKIMFPCK-AYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSALSWQQS 66
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 64/154 (41%), Gaps = 33/154 (21%)
Query: 551 VIRNYGQLLVDIACVVPDG-VVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPD 609
VIRN Q+ V P+G +C ++ + E+ FE +D++ G LL+ + V
Sbjct: 650 VIRN-SQVWVGTIGTGPNGRKLC--ATFQHTET-FEFQDEV------GALLLSVCQKVGQ 699
Query: 610 GVVCFFTSYLYLESVVASWYDQGIIDNLQKRKLLFIETQDAL------------DSRSVS 657
G++CF SY L+ + W G+ NL+ K + E Q D+
Sbjct: 700 GILCFLPSYKLLDKLKDRWIHTGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKFK 759
Query: 658 KERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCD 691
E+DG ++ C R K E + CD
Sbjct: 760 GEKDGALLIAVC----------RGKVSEGLDFCD 783
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
Query: 356 VLYFCCLDSSLAIKPVFDRFQTVVITSGTLSPLDMY 391
+L F CL+ ++A + D +TVV+TSGTLSP+D +
Sbjct: 599 MLNFWCLNPAVAFSDLND-VRTVVLTSGTLSPMDSF 633
>sp|Q16X92|RTEL1_AEDAE Regulator of telomere elongation helicase 1 homolog OS=Aedes
aegypti GN=AAEL008960 PE=3 SV=1
Length = 1010
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 121/262 (46%), Gaps = 24/262 (9%)
Query: 34 VCDFYEKFDAVGREAP--LAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHY 91
C FY + ++ +E P ++ + I L ++G ++ CP+FL+++ I A I+ Y+Y
Sbjct: 183 TCSFYSRVESC-KERPEVVSNVIMDIEDLVKVGTKVRACPFFLSKELIESADILFMPYNY 241
Query: 92 LLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLK 151
LLDPK + E++ +++++ DEAHN++ +C +S S++I I + ++ ++ +
Sbjct: 242 LLDPKARKANNLEIS-NTIIILDEAHNVEKMCEESASMQIRSTDIALCIDDVTSIMKVMD 300
Query: 152 E---MKEADSAKLR---EEYARLVEGLRDAQSARETDVVL---ANPVLPDEILQEVV-PG 201
+ E D K ++ A L E L + ++ V+ P + E+
Sbjct: 301 HSVAIPEDDETKKDFTIDDLALLKEMLLQLEKTVDSIPVMFSQGGNTFPGTYIFEIFEKA 360
Query: 202 NIRTAEHFV--GFLKRFIEYLKTRLRVQQVVQESP-----ATFLKDISSKPAP---SMIS 251
NI+ + + L+ I+Y+ T V+ A L I + P + I
Sbjct: 361 NIKEGNYHIIAQLLENIIQYIATITEKNNFVRRGGGLQILAEALSIIFAGSGPEYRASID 420
Query: 252 EAYRYIFSTEEHLKTRLRVQQV 273
+ Y+ EE KTR V+Q
Sbjct: 421 KCYKVHIEIEEQKKTRGNVKQA 442
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 69/115 (60%), Gaps = 4/115 (3%)
Query: 689 VCDFYEKFDAVGREAP--LAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHY 746
C FY + ++ +E P ++ + I L ++G ++ CP+FL+++ I A I+ Y+Y
Sbjct: 183 TCSFYSRVESC-KERPEVVSNVIMDIEDLVKVGTKVRACPFFLSKELIESADILFMPYNY 241
Query: 747 LLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTL 801
LLDPK + E++ +++++ DEAHN++ +C +S S++I I + ++ ++
Sbjct: 242 LLDPKARKANNLEIS-NTIIILDEAHNVEKMCEESASMQIRSTDIALCIDDVTSI 295
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 66/177 (37%), Gaps = 59/177 (33%)
Query: 428 IDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM---- 483
I+ + V FP+E Y Q YM + + L + +LE P+GTGKT SLL +A++
Sbjct: 6 INGITVNFPFEP-YQVQRDYMSRVIECLQNSTNGVLESPTGTGKTLSLLCSSLAWVLHKK 64
Query: 484 ----------------------------------------------NAHPLDVTKLLYCS 497
V K++Y S
Sbjct: 65 AQVQANMRTNITDLKEFEMVQRKKLGGDGGSGMEELLDKLHDGCGPEGAKWGVPKIVYAS 124
Query: 498 RTVPEIEKVVEELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSEFETRDDISVIRN 554
RT ++ +V++E+ K+ M G++L SR LCIH E + S N
Sbjct: 125 RTHSQLTQVMQEM--------KNTSYSFMKGVILGSRDQLCIHPEVSKEEGNSTKTN 173
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S + RD+ I + G+ ++ ++P G++ FF SY L +W + GI + +
Sbjct: 534 LNSSYGNRDNPKYISSLGRTILSFCPIIPGGLLVFFPSYPLLNKCQEAWQETGIWAQISR 593
Query: 640 RKLLFIE 646
K +F+E
Sbjct: 594 TKPIFVE 600
Score = 38.9 bits (89), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 849 ILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYLTDN 886
+++ K DYG ++ D RF ++S+L WIQ++L N
Sbjct: 704 VIRHKNDYGAILLCDNRFHNHRQKSQLSSWIQKHLNTN 741
>sp|A4K436|RTEL1_BOVIN Regulator of telomere elongation helicase 1 OS=Bos taurus GN=RTEL1
PE=2 SV=1
Length = 1216
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 35 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 94
C FY + E LA + I L G + LCPY+L+R A I+ Y+YLLD
Sbjct: 171 CHFYNNVEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIFMPYNYLLD 230
Query: 95 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKE-M 153
K +L + +VV+FDEAHN++ +C ++ S + T + ++ L+E
Sbjct: 231 AKSRRAHGIDL-KGTVVIFDEAHNVEKMCEEAASFDL---TPHDVASELDVIDRVLEERT 286
Query: 154 KEADSAKLREEYA 166
K A A+L E++
Sbjct: 287 KVAQQAELHPEFS 299
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 5/133 (3%)
Query: 690 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 749
C FY + E LA + I L G + LCPY+L+R A I+ Y+YLLD
Sbjct: 171 CHFYNNVEEKSLEQELATPILDIEDLVRSGTKHKLCPYYLSRNLKQQADIIFMPYNYLLD 230
Query: 750 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKE-M 808
K +L + +VV+FDEAHN++ +C ++ S + T + ++ L+E
Sbjct: 231 AKSRRAHGIDL-KGTVVIFDEAHNVEKMCEEAASFDL---TPHDVASELDVIDRVLEERT 286
Query: 809 KEADSAKLREEYA 821
K A A+L E++
Sbjct: 287 KVAQQAELHPEFS 299
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 57/133 (42%), Gaps = 17/133 (12%)
Query: 554 NYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGVVC 613
N Q+ V + PDG L S F+ R + + G++L +I+ VVP G++
Sbjct: 505 NQHQIWVGVIPKGPDGA--------QLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLV 556
Query: 614 FFTSYLYLESVVASWYDQGIIDNLQKRKLLFIETQ---------DALDSRSVSKERDGKI 664
FF SY +E + W + L+ RK LF+E + +A +R + E G I
Sbjct: 557 FFPSYPVMEKSLEFWRARDFTRKLEVRKPLFVEPRSKGGFSEVMEAFYARVAAPESSGAI 616
Query: 665 VDGRCHSLTSSSV 677
C S +
Sbjct: 617 FLAVCRGKASEGL 629
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 66/160 (41%), Gaps = 48/160 (30%)
Query: 426 LMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM-- 483
+ + + V FP++ Y Q YM ++ + L K + +LE P+GTGKT LL +A+
Sbjct: 4 ITLKGVTVDFPFQ-PYKCQEEYMSKVLECLQEKVNGILESPTGTGKTLCLLCSTLAWREH 62
Query: 484 ----------------------------NAHP--------LDVTKLLYCSRTVPEIEKVV 507
NA P D+ K++Y SRT ++ +V+
Sbjct: 63 LRDAVSARRIAERASGELFPDRTLASWGNAIPEGDVPACYTDIPKIIYASRTHSQLTQVI 122
Query: 508 EELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSEFETRD 547
EL N VL SR+ LCIH E + ++
Sbjct: 123 SEL---------RNTSYRPRVCVLGSREQLCIHPEVKKQE 153
Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 849 ILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYL 883
+++ + DYG + D RFA +D R++LP W++ ++
Sbjct: 696 VIRHRHDYGAVFLCDHRFAHADTRAQLPSWVRPHV 730
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%)
Query: 521 NEEINMTGLVLSSRKNLCIHSEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYL 580
N+ G++ + S F+ R + + G++L +I+ VVP G++ FF SY +
Sbjct: 505 NQHQIWVGVIPKGPDGAQLSSAFDRRFSDECLSSLGKVLSNISRVVPHGLLVFFPSYPVM 564
Query: 581 ESVFE 585
E E
Sbjct: 565 EKSLE 569
>sp|Q750G3|CHL1_ASHGO ATP-dependent RNA helicase CHL1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=CHL1
PE=3 SV=1
Length = 801
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 565 VVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESV 624
V+PD + F E F R+DI++I + +A VP G+V FF+SY Y++ V
Sbjct: 559 VIPDDNLNAFIVSENFEFTFANREDIALIERLFHFIYQLASRVPFGMVVFFSSYKYIDFV 618
Query: 625 VASWYDQGIIDNLQKRKLLFIETQDALD-----SRSVSKERDGKIV 665
V +W D+G++ L K ++ ET D D S ++ E+ G I+
Sbjct: 619 VKTWTDRGLLSRLDAIKRIYHETSDGADVLKGYSETIQSEKKGAIL 664
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 54 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 113
+ I L +G L CPY+ +R+ I A+++ Y +LL + +L R S++V
Sbjct: 288 IQDIEDLVGIGNTLHACPYYSSRELIEGAEVITLPYQHLLLENARKTMGIDL-RDSIIVI 346
Query: 114 DEAHNI 119
DEAHN+
Sbjct: 347 DEAHNL 352
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 709 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 768
+ I L +G L CPY+ +R+ I A+++ Y +LL + +L R S++V
Sbjct: 288 IQDIEDLVGIGNTLHACPYYSSRELIEGAEVITLPYQHLLLENARKTMGIDL-RDSIIVI 346
Query: 769 DEAHNI 774
DEAHN+
Sbjct: 347 DEAHNL 352
>sp|Q96FC9|DDX11_HUMAN Probable ATP-dependent RNA helicase DDX11 OS=Homo sapiens GN=DDX11
PE=1 SV=1
Length = 970
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 559 LVDIAC---VVPDG----VVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGV 611
+V+ +C + PD V+C S LE F+ R+ ++ G++L ++ VVP GV
Sbjct: 644 VVEFSCGHVIPPDNILPLVICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGV 703
Query: 612 VCFFTSYLYLESVVASWYDQGIIDNLQKRKLLFIETQDA 650
VCFF SY YL V A W G++ L RK +F E + A
Sbjct: 704 VCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSA 742
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 30 ENIPVCDFYEKFDAVG--REAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVY 87
E C FY + +G R+ LA V + +L +G+E CPY+ +R AI A++VV
Sbjct: 310 EKQAACPFY-NHEQMGLLRDEALAE-VKDMEQLLALGKEARACPYYGSRLAIPAAQLVVL 367
Query: 88 SYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRIN 132
Y LL L + VV+ DEAHN+ + SV ++
Sbjct: 368 PYQMLLHAATRQAAGIRL-QDQVVIIDEAHNLIDTITGMHSVEVS 411
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 685 ENIPVCDFYEKFDAVG--REAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVY 742
E C FY + +G R+ LA V + +L +G+E CPY+ +R AI A++VV
Sbjct: 310 EKQAACPFY-NHEQMGLLRDEALAE-VKDMEQLLALGKEARACPYYGSRLAIPAAQLVVL 367
Query: 743 SYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRIN 787
Y LL L + VV+ DEAHN+ + SV ++
Sbjct: 368 PYQMLLHAATRQAAGIRL-QDQVVIIDEAHNLIDTITGMHSVEVS 411
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 529 LVLSSRKNLCIHSEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESV 583
++ S N + F+ R+ ++ G++L ++ VVP GVVCFF SY YL V
Sbjct: 662 VICSGISNQPLEFTFQKRELPQMMDEVGRILCNLCGVVPGGVVCFFPSYEYLRQV 716
>sp|Q7QEI1|RTEL1_ANOGA Regulator of telomere elongation helicase 1 homolog OS=Anopheles
gambiae GN=AGAP000634 PE=3 SV=5
Length = 991
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/382 (20%), Positives = 147/382 (38%), Gaps = 91/382 (23%)
Query: 35 CDFYEKFDAVGREAPLAP-GVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLL 93
C FY + + +A V I L +GR+L CPY+L+++ + A ++ Y+YLL
Sbjct: 175 CSFYNRVETAKDRPDVATVPVMDIEDLVTVGRKLKACPYYLSKELVEQADVIFMPYNYLL 234
Query: 94 DPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEM 153
DPK L +++V++ DEAHN++ +C + S + I A+ + ++ +K M
Sbjct: 235 DPKARKSNGLSL-QNTVIILDEAHNVEKMCEEVGSALLRSSDIALAIEDTSSV---IKSM 290
Query: 154 KEADSAKLREEYARLVEGLRDAQSARETDVVLANPVLPDEILQEVVPGNIRTAEHFVGFL 213
+ G ++ ++ L + VL EIL
Sbjct: 291 MDGG-------------GAWTGDGEKQLELTLDDLVLLKEIL------------------ 319
Query: 214 KRFIEYLKTRLRVQQVVQESPATFLKDISSKPAPSMISEAYRYIFSTEEHLKTRLRVQQV 273
L V++ V + P F + ++ P YIF E + V
Sbjct: 320 ----------LGVEKAVDDIPILFSQGGTTHPG--------TYIFDLLEKANIKFGNINV 361
Query: 274 VQESPATFLKDISSKVCIERKPLRFCAERLASLL-RTLEITNLTDFSSLVVITHLATLVS 332
V + + + I++ E+ + R + ++ DF +V +
Sbjct: 362 VLQVMNSLITHITT-------------EKTGGFVRRGAGLQSMVDFLEVVFASSGPEYRQ 408
Query: 333 SYTKGFAIIVEPFSD---------------------KAPT-VPNPVLYFCCLDSSLAIKP 370
+ K F + +EP KAP + V+ F C + ++
Sbjct: 409 AVEKCFRVHIEPEEPKQLAKGGVKRADGWTATKQPLKAPVKSTSKVINFWCFNPGFGMRQ 468
Query: 371 VFDR-FQTVVITSGTLSPLDMY 391
+ D +++++TSGTL+PL +
Sbjct: 469 LVDSGTRSIILTSGTLAPLKPF 490
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 89/200 (44%), Gaps = 35/200 (17%)
Query: 616 TSYLYLESVVASWYDQGIIDNLQKRKLLFIETQDALDSRSVSKERDGKIVDGRCHSLTSS 675
TSYL++ S++ DQ I +SK+ + I C
Sbjct: 131 TSYLFVRSIILGSRDQLCIHP------------------DISKQENNAIKTVLCRE---- 168
Query: 676 SVRDRHKAGENIPVCDFYEKFDAVGREAPLAP-GVYSITKLKEMGRELGLCPYFLARQAI 734
SV+ R+ C FY + + +A V I L +GR+L CPY+L+++ +
Sbjct: 169 SVKARN--------CSFYNRVETAKDRPDVATVPVMDIEDLVTVGRKLKACPYYLSKELV 220
Query: 735 IHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKA 794
A ++ Y+YLLDPK L +++V++ DEAHN++ +C + S + I A
Sbjct: 221 EQADVIFMPYNYLLDPKARKSNGLSL-QNTVIILDEAHNVEKMCEEVGSALLRSSDIALA 279
Query: 795 VGNIQTLEGTLKEMKEADSA 814
+ + ++ +K M + A
Sbjct: 280 IEDTSSV---IKSMMDGGGA 296
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 73/166 (43%), Gaps = 50/166 (30%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM--- 483
MI+ +PV FP+E Y Q YM ++ + L K + +LE P+GTGKT SLL +A++
Sbjct: 5 MINGIPVNFPFE-PYELQKNYMAKVIECLQNKTNGVLESPTGTGKTLSLLCSSMAWLLHM 63
Query: 484 ----NAHPLDV----------------------------------TKLLYCSRTVPEIEK 505
H ++ K++Y SRT ++ +
Sbjct: 64 KSKQPKHRMETIDTLPEPPELSNAKHAALDPEQALALQQQKANAKMKIIYASRTHSQLSQ 123
Query: 506 VVEELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSEFETRDDISV 551
++EL K+ + + ++L SR LCIH + +++ ++
Sbjct: 124 AMQEL--------KNTSYLFVRSIILGSRDQLCIHPDISKQENNAI 161
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S F+ R + I + G+ + + ++P G++ FF SY L W GI + +
Sbjct: 527 LNSSFKNRSNPEYIASLGRTALSLCPIIPGGLLIFFPSYPLLNKCSEEWQASGIWGQISR 586
Query: 640 RKLLFIE 646
K +F+E
Sbjct: 587 LKQIFVE 593
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 31/59 (52%)
Query: 849 ILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYLTDNLTNLSTEEAVQLSKRWLRQMA 907
+++ K DYG ++ D RF + ++++L WI +L ++ + V R+ R M+
Sbjct: 697 VIRHKDDYGAILLCDSRFQNARQQAQLSAWIHSHLRESSAVPNFGTVVGEMSRFFRHMS 755
>sp|A8MPP1|D11L8_HUMAN Putative ATP-dependent RNA helicase DDX11-like protein 8 OS=Homo
sapiens GN=DDX11L8 PE=3 SV=1
Length = 907
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 559 LVDIAC---VVPDG---VVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGVV 612
+V+ +C + PD V+C S LE F+ RD ++ G++L ++ VV GVV
Sbjct: 646 VVEFSCGHVIPPDNIPLVICSGISNQPLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGVV 705
Query: 613 CFFTSYLYLESVVASWYDQGIIDNLQKRKLLFIETQDA 650
CFF+SY YL V A W G++ L RK +F E + A
Sbjct: 706 CFFSSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSA 743
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 30 ENIPVCDFYEKFDAVG--REAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVY 87
E C FY + +G R+ LA V + +L +G+E CPY+ +R AI AK+VV
Sbjct: 312 EKQAACPFY-NHEQMGLLRDEALAE-VKDMEQLLALGKEARACPYYRSRLAIPAAKLVVL 369
Query: 88 SYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRIN 132
Y LL L + VV+ DEAHN+ + SV ++
Sbjct: 370 PYQMLLHAATRQAAGIRL-QDQVVIIDEAHNLIDTITGMHSVEVS 413
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 685 ENIPVCDFYEKFDAVG--REAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVY 742
E C FY + +G R+ LA V + +L +G+E CPY+ +R AI AK+VV
Sbjct: 312 EKQAACPFY-NHEQMGLLRDEALAE-VKDMEQLLALGKEARACPYYRSRLAIPAAKLVVL 369
Query: 743 SYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRIN 787
Y LL L + VV+ DEAHN+ + SV ++
Sbjct: 370 PYQMLLHAATRQAAGIRL-QDQVVIIDEAHNLIDTITGMHSVEVS 413
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 525 NMTGLVLSSRKNLCIHSEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESV 583
N+ ++ S N + F+ RD ++ G++L ++ VV GVVCFF+SY YL V
Sbjct: 659 NIPLVICSGISNQPLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGVVCFFSSYEYLRQV 717
>sp|Q9NZ71|RTEL1_HUMAN Regulator of telomere elongation helicase 1 OS=Homo sapiens
GN=RTEL1 PE=1 SV=2
Length = 1219
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 35 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 94
C FY + E LA + I L + G + +CPY+L+R A I+ Y+YLLD
Sbjct: 172 CHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLD 231
Query: 95 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI-QTLEGTLKEM 153
K + +L + +VV+FDEAHN++ +C +S S + + + I Q LE K
Sbjct: 232 AKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAA 290
Query: 154 KEAD 157
++ +
Sbjct: 291 QQGE 294
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 690 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 749
C FY + E LA + I L + G + +CPY+L+R A I+ Y+YLLD
Sbjct: 172 CHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLD 231
Query: 750 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI-QTLEGTLKEM 808
K + +L + +VV+FDEAHN++ +C +S S + + + I Q LE K
Sbjct: 232 AKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDVIDQVLEEQTKAA 290
Query: 809 KEAD 812
++ +
Sbjct: 291 QQGE 294
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 49/161 (30%)
Query: 426 LMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAY--- 482
++++ + V FP++ Y Q YM ++ + L K + +LE P+GTGKT LL +A+
Sbjct: 4 IVLNGVTVDFPFQ-PYKCQQEYMTKVLECLQQKVNGILESPTGTGKTLCLLCTTLAWREH 62
Query: 483 --------------------------------MNAHPL----DVTKLLYCSRTVPEIEKV 506
P+ D+ K++Y SRT ++ +V
Sbjct: 63 LRDGISARKIAERAQGELFPDRALSSWGNAAAAAGDPIACYTDIPKIIYASRTHSQLTQV 122
Query: 507 VEELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSEFETRD 547
+ EL N VL SR+ LCIH E + ++
Sbjct: 123 INEL---------RNTSYRPKVCVLGSREQLCIHPEVKKQE 154
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 8/90 (8%)
Query: 557 QLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFT 616
Q+ V + PDG L S F+ R + + G+ L +IA VVP G++ FF
Sbjct: 510 QIWVGVVPRGPDGA--------QLSSAFDRRFSEECLSSLGKALGNIARVVPYGLLIFFP 561
Query: 617 SYLYLESVVASWYDQGIIDNLQKRKLLFIE 646
SY +E + W + + ++ K LF+E
Sbjct: 562 SYPVMEKSLEFWRARDLARKMEALKPLFVE 591
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 849 ILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYLT--DNLTNL 890
+++ + DYG + D RFA +D R++LP W++ ++ DN ++
Sbjct: 698 VIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHV 741
>sp|Q5RE34|RTEL1_PONAB Regulator of telomere elongation helicase 1 OS=Pongo abelii
GN=RTEL1 PE=2 SV=1
Length = 1302
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 35 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 94
C FY + E LA + I L + G + +CPY+L+R A I+ Y+YLLD
Sbjct: 173 CHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLD 232
Query: 95 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI-QTLEGTLKEM 153
K + +L + +VV+FDEAHN++ +C +S S + + + I Q LE K
Sbjct: 233 AKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDIIDQVLEEQTKTA 291
Query: 154 KEAD 157
++ +
Sbjct: 292 QQGE 295
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 690 CDFYEKFDAVGREAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLD 749
C FY + E LA + I L + G + +CPY+L+R A I+ Y+YLLD
Sbjct: 173 CHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLKQQADIIFMPYNYLLD 232
Query: 750 PKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNI-QTLEGTLKEM 808
K + +L + +VV+FDEAHN++ +C +S S + + + I Q LE K
Sbjct: 233 AKSRRAHNIDL-KGTVVIFDEAHNVEKMCEESASFDLTPHDLASGLDIIDQVLEEQTKTA 291
Query: 809 KEAD 812
++ +
Sbjct: 292 QQGE 295
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 557 QLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFT 616
Q+ V + PDG L S F+ R + + G+ L + A VVP G++ FF
Sbjct: 511 QIWVGVVPRGPDGA--------QLSSAFDRRFSEECLSSLGKALGNTARVVPCGLLIFFP 562
Query: 617 SYLYLESVVASWYDQGIIDNLQKRKLLFIE 646
SY +E + W + + ++ K LF+E
Sbjct: 563 SYPVMEKSLEFWRARDLARKMEALKPLFVE 592
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 50/162 (30%)
Query: 426 LMIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAY--- 482
++++ + V FP++ Y Q YM ++ + L K + +LE +GTGKT LL +A+
Sbjct: 4 IVLNGVTVDFPFQ-PYKCQQEYMTKVLECLQQKVNGILESHTGTGKTLCLLCTTLAWREH 62
Query: 483 ---------------------------------MNAHPL----DVTKLLYCSRTVPEIEK 505
P+ D+ K++Y SRT ++ +
Sbjct: 63 LRDGISARKIAERVQGELFPDRALSSWGNAAAAAAGDPIACYTDIPKIIYASRTHSQLTQ 122
Query: 506 VVEELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSEFETRD 547
V+ EL N VL SR+ LCIH E + ++
Sbjct: 123 VINEL---------RNTSYRPKVCVLGSREQLCIHPEVKKQE 155
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 849 ILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYLT--DNLTNL 890
+++ + DYG + D RFA +D R++LP W++ ++ DN ++
Sbjct: 699 VIRHRQDYGAVFLCDHRFAFADARAQLPSWVRPHVRVYDNFGHV 742
>sp|Q92771|DDX12_HUMAN Putative ATP-dependent RNA helicase DDX12 OS=Homo sapiens GN=DDX12P
PE=5 SV=3
Length = 950
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 559 LVDIAC---VVPDG----VVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGV 611
+V+ +C + PD V+C S LE F+ RD ++ G++L ++ VV GV
Sbjct: 663 VVEFSCGHVIPPDNILPLVICSGVSNQPLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGV 722
Query: 612 VCFFTSYLYLESVVASWYDQGIIDNLQKRKLLFIETQDA 650
VCFF SY YL V A W G++ L RK +F E + A
Sbjct: 723 VCFFPSYEYLRQVHAHWEKGGLLGRLAARKKIFQEPKSA 761
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Query: 30 ENIPVCDFYEKFDAVG--REAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVY 87
E C FY + +G R+ LA V + +L +G+E CPY+ +R AI A++VV
Sbjct: 329 EKQAACPFY-NHEQMGLLRDEALAE-VKDMEQLLALGKEARACPYYGSRLAIPAAQLVVL 386
Query: 88 SYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGN-IQTL 146
Y LL L + VV+ DEAHN+ + SV ++ + +A +Q +
Sbjct: 387 PYQMLLHAATRQAAGIRL-QDQVVIIDEAHNLIDTTTSMHSVEVSGSQLCQAHSQLLQYM 445
Query: 147 EGTLKEMKEADSAKLRE 163
E K +K + L++
Sbjct: 446 ERYGKRLKAKNLMYLKQ 462
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 6/137 (4%)
Query: 685 ENIPVCDFYEKFDAVG--REAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVY 742
E C FY + +G R+ LA V + +L +G+E CPY+ +R AI A++VV
Sbjct: 329 EKQAACPFY-NHEQMGLLRDEALAE-VKDMEQLLALGKEARACPYYGSRLAIPAAQLVVL 386
Query: 743 SYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGN-IQTL 801
Y LL L + VV+ DEAHN+ + SV ++ + +A +Q +
Sbjct: 387 PYQMLLHAATRQAAGIRL-QDQVVIIDEAHNLIDTTTSMHSVEVSGSQLCQAHSQLLQYM 445
Query: 802 EGTLKEMKEADSAKLRE 818
E K +K + L++
Sbjct: 446 ERYGKRLKAKNLMYLKQ 462
Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 529 LVLSSRKNLCIHSEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESV 583
++ S N + F+ RD ++ G++L ++ VV GVVCFF SY YL V
Sbjct: 681 VICSGVSNQPLEFTFQKRDLPQMMDEVGRILCNLCGVVSGGVVCFFPSYEYLRQV 735
>sp|Q5SXJ3|FANCJ_MOUSE Fanconi anemia group J protein homolog OS=Mus musculus GN=Brip1
PE=2 SV=1
Length = 1174
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 29 GENIPVCDFYEKFDAVGREAPLA-----PGVYSITKLKEMGRELGLCPYFLARQAIIHAK 83
G++ C FY + + L + I +L +GR+L CPY+ AR+ I A
Sbjct: 307 GKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARELIEDAD 366
Query: 84 IVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRI 131
IV Y+YLLD +I + +L + VV+ DEAHNI++ +S S +
Sbjct: 367 IVFCPYNYLLDSQIRETMDIKL-KGQVVILDEAHNIEDCARESASYSV 413
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 6/108 (5%)
Query: 684 GENIPVCDFYEKFDAVGREAPLA-----PGVYSITKLKEMGRELGLCPYFLARQAIIHAK 738
G++ C FY + + L + I +L +GR+L CPY+ AR+ I A
Sbjct: 307 GKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARELIEDAD 366
Query: 739 IVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLSVRI 786
IV Y+YLLD +I + +L + VV+ DEAHNI++ +S S +
Sbjct: 367 IVFCPYNYLLDSQIRETMDIKL-KGQVVILDEAHNIEDCARESASYSV 413
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 428 IDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYMNA 485
I + + FP YP Q A M + + L++ HCLLE P+G+GK+ +LL +A+ +
Sbjct: 10 IGGVKIHFPCR-AYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQS 66
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 356 VLYFCCLDSSLAIKPVFDRFQTVVITSGTLSPLDMY 391
L F CL+ ++A + D+ +T+V+TSGTLSPL +
Sbjct: 591 ALNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSF 626
>sp|Q9BX63|FANCJ_HUMAN Fanconi anemia group J protein OS=Homo sapiens GN=BRIP1 PE=1 SV=1
Length = 1249
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 29 GENIPVCDFYEKFDAVGREAPLAP-----GVYSITKLKEMGRELGLCPYFLARQAIIHAK 83
G+N C FY + + L + I +L +G++L CPY+ AR+ I A
Sbjct: 304 GKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKKLKACPYYTARELIQDAD 363
Query: 84 IVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLS-------VRINRRTI 136
I+ Y+YLLD +I + L + VV+ DEAHNI++ +S S +R R +
Sbjct: 364 IIFCPYNYLLDAQIRESMDLNL-KEQVVILDEAHNIEDCARESASYSVTEVQLRFARDEL 422
Query: 137 EKAVGN 142
+ V N
Sbjct: 423 DSMVNN 428
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 13/126 (10%)
Query: 684 GENIPVCDFYEKFDAVGREAPLAP-----GVYSITKLKEMGRELGLCPYFLARQAIIHAK 738
G+N C FY + + L + I +L +G++L CPY+ AR+ I A
Sbjct: 304 GKNGKSCYFYHGVHKISDQHTLQTFQGMCKAWDIEELVSLGKKLKACPYYTARELIQDAD 363
Query: 739 IVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVCVDSLS-------VRINRRTI 791
I+ Y+YLLD +I + L + VV+ DEAHNI++ +S S +R R +
Sbjct: 364 IIFCPYNYLLDAQIRESMDLNL-KEQVVILDEAHNIEDCARESASYSVTEVQLRFARDEL 422
Query: 792 EKAVGN 797
+ V N
Sbjct: 423 DSMVNN 428
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 428 IDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAY---MN 484
I + ++FPY+ YP Q A M + + L++K HCLLE P+G+GK+ +LL +A+ ++
Sbjct: 10 IGGVKIYFPYK-AYPSQLAMMNSILRGLNSKQHCLLESPTGSGKSLALLCSALAWQQSLS 68
Query: 485 AHPLD 489
P D
Sbjct: 69 GKPAD 73
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 583 VFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQKRKL 642
FE +D++ G LL+ + V G++CF SY LE + W G+ NL+ K
Sbjct: 669 TFEFQDEV------GALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKT 722
Query: 643 LFIETQDA 650
+ +E Q
Sbjct: 723 VIVEPQGG 730
Score = 39.3 bits (90), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 356 VLYFCCLDSSLAIKPVFDRFQTVVITSGTLSPLDMY 391
VL F CL+ ++A + + QT+V+TSGTLSP+ +
Sbjct: 588 VLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSF 623
>sp|Q2U587|CHL1_ASPOR ATP-dependent RNA helicase chl1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=chl1 PE=3 SV=1
Length = 721
Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 81/175 (46%), Gaps = 5/175 (2%)
Query: 709 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 768
V I + ++G+++G+CPY+ +R H++IV Y LL + + + + VVV
Sbjct: 190 VKDIEDIGKLGKDIGICPYYASRSVTKHSEIVTLPYPLLLQRSARDALDLSI-KGHVVVI 248
Query: 769 DEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLR 828
DEAHN+ + + SV I ++ ++ + T K + + + RLV +
Sbjct: 249 DEAHNLMDAISNIHSVTITLSELQTSLFQLTTYARKFKTRLKGKNRNYIAQVIRLVTSIT 308
Query: 829 DA-QSARETDVVLANPVLPDEILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEY 882
D ++ ET PV P +++ GK G+ + R + SKL + + Y
Sbjct: 309 DHLKTILETSQAPEGPVQPSDLMSGK---GVDQINPYKLCRYLRESKLARKVDGY 360
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 54 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 113
V I + ++G+++G+CPY+ +R H++IV Y LL + + + + VVV
Sbjct: 190 VKDIEDIGKLGKDIGICPYYASRSVTKHSEIVTLPYPLLLQRSARDALDLSI-KGHVVVI 248
Query: 114 DEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLR 173
DEAHN+ + + SV I ++ ++ + T K + + + RLV +
Sbjct: 249 DEAHNLMDAISNIHSVTITLSELQTSLFQLTTYARKFKTRLKGKNRNYIAQVIRLVTSIT 308
Query: 174 DA-QSARETDVVLANPVLPDEIL 195
D ++ ET PV P +++
Sbjct: 309 DHLKTILETSQAPEGPVQPSDLM 331
Score = 42.4 bits (98), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 23/135 (17%)
Query: 441 YPEQYAYMVELKKALDAKGHCLLEMPSG--TGKTTSLLSLIVAYMN---AHPL------- 488
Y Q +M L ++ + E P+G G +T L L+ + + AHP
Sbjct: 15 YDIQLQFMRALYSCIEKGKVAVFESPTGKLAGLSTGTLELLKRFQHKSSAHPRQDEDYGD 74
Query: 489 DVTKLLYCSRTVPEIEKVVEELARL---------FDYYIKHNEEI--NMTGLVLSSRKNL 537
+ K+LYCSRT ++ + EL R+ F + + + + L L SRKNL
Sbjct: 75 EDIKILYCSRTHSQLTQFASELRRVNMPSSIPKDFSEGVADTDGLQEGVRHLSLGSRKNL 134
Query: 538 CIHSEFETRDDISVI 552
CI+ + D+++ I
Sbjct: 135 CINPRVSSLDNVTAI 149
Score = 38.1 bits (87), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 20/74 (27%)
Query: 583 VFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASW-------YDQGIID 635
FETRD + V+PDGVV FF SY YL V++ W ++ + D
Sbjct: 489 TFETRDSERM-------------VIPDGVVAFFPSYDYLSQVLSIWKRTLAGEKNRTVYD 535
Query: 636 NLQKRKLLFIETQD 649
++ +K + E++D
Sbjct: 536 LIEGKKTILHESRD 549
>sp|Q6AXC6|DDX11_MOUSE Probable ATP-dependent RNA helicase DDX11 OS=Mus musculus GN=Ddx11
PE=2 SV=1
Length = 880
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 559 LVDIAC---VVPDGV----VCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGV 611
+V+ +C + PD + +C S LE ++ R+ ++ G++L ++ VVP GV
Sbjct: 616 VVEFSCGHVIPPDNILPLIICSGPSNQQLEFTYQRRELPQMVEETGRILCNLCNVVPGGV 675
Query: 612 VCFFTSYLYLESVVASWYDQGIIDNLQKRKLLFIETQDA 650
VCF SY YL V A W G++ L RK +F E + A
Sbjct: 676 VCFLPSYEYLRQVHAHWDKTGLLTRLSVRKKIFQEPKRA 714
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 8 KIVDGRCHSLTSSSVRDRHKAGENIP---------VCDFY--EKFDAVGREAPLAPGVYS 56
++++ RC + S R+++ GE+ P C FY E+ + + E L V
Sbjct: 251 QLMNDRCVDMQRSK-REKNGTGEDKPKRKRQKIQTSCPFYNHEQMELLRDEILLE--VKD 307
Query: 57 ITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEA 116
+ +L +G+E CPY+ +R AI A++VV Y LL L + VV+ DEA
Sbjct: 308 MEQLVALGKEARACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRL-QGQVVIIDEA 366
Query: 117 HNIDNVCVDSLSVRIN 132
HN+ + + S +N
Sbjct: 367 HNLIDTITNIHSTEVN 382
Score = 50.1 bits (118), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 663 KIVDGRCHSLTSSSVRDRHKAGENIP---------VCDFY--EKFDAVGREAPLAPGVYS 711
++++ RC + S R+++ GE+ P C FY E+ + + E L V
Sbjct: 251 QLMNDRCVDMQRSK-REKNGTGEDKPKRKRQKIQTSCPFYNHEQMELLRDEILLE--VKD 307
Query: 712 ITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEA 771
+ +L +G+E CPY+ +R AI A++VV Y LL L + VV+ DEA
Sbjct: 308 MEQLVALGKEARACPYYGSRFAIPAAQLVVLPYPMLLHAATRQAAGIRL-QGQVVIIDEA 366
Query: 772 HNIDNVCVDSLSVRIN 787
HN+ + + S +N
Sbjct: 367 HNLIDTITNIHSTEVN 382
Score = 40.8 bits (94), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%)
Query: 529 LVLSSRKNLCIHSEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRD 588
++ S N + ++ R+ ++ G++L ++ VVP GVVCF SY YL V D
Sbjct: 634 IICSGPSNQQLEFTYQRRELPQMVEETGRILCNLCNVVPGGVVCFLPSYEYLRQVHAHWD 693
Query: 589 DISVI 593
++
Sbjct: 694 KTGLL 698
>sp|O14147|CHL1_SCHPO ATP-dependent RNA helicase chl1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=chl1 PE=3 SV=1
Length = 844
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
E + +DD +++++ G+ + ++PDGVV FF S+ +L+ V W GI + L
Sbjct: 615 FEFTHKRKDDENLLKDLGRTFQNFISIIPDGVVVFFPSFAFLQQAVKVWEMNGITNRLNA 674
Query: 640 RKLLFIETQDALDSRSVSKERDGKIVDGRCHSLTSSSVRDRHKAGENI 687
+K LFIE++D D+ + E + VD + S + R G N
Sbjct: 675 KKPLFIESKDFGDNPLDTFEHYKQSVDAGLSGMLFSVIGGRLSEGINF 722
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 653 SRSVSKERDGKIVDGRCHSLTSSSVRDRHKA---GENIPVCDFYEKFDAVGREAPLAPGV 709
+ V K R ++ +C L S+ HK +N + DF R+ LA +
Sbjct: 257 NNEVRKLRPTSALNEKCIELQGSA----HKCPFLQDNTQLWDF--------RDEALAE-I 303
Query: 710 YSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFD 769
I +L E+G+ L +CPY+ R+A+ A+IV Y LL N ++ L + ++ + D
Sbjct: 304 MDIEELVELGQRLKVCPYYGTREAVDSAQIVTLPYPLLLQESARNALNLTL-KDNICIID 362
Query: 770 EAHN-IDNVC 778
EAHN ID +C
Sbjct: 363 EAHNLIDAIC 372
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 18/127 (14%)
Query: 1 VSKERDGKIVDGRCHSLTSSSVRDRHKA---GENIPVCDFYEKFDAVGREAPLAPGVYSI 57
V K R ++ +C L S+ HK +N + DF R+ LA + I
Sbjct: 260 VRKLRPTSALNEKCIELQGSA----HKCPFLQDNTQLWDF--------RDEALAE-IMDI 306
Query: 58 TKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAH 117
+L E+G+ L +CPY+ R+A+ A+IV Y LL N ++ L + ++ + DEAH
Sbjct: 307 EELVELGQRLKVCPYYGTREAVDSAQIVTLPYPLLLQESARNALNLTL-KDNICIIDEAH 365
Query: 118 N-IDNVC 123
N ID +C
Sbjct: 366 NLIDAIC 372
Score = 33.9 bits (76), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 8/61 (13%)
Query: 484 NAHPLDVTKLLYCSRTVPEIEKVVEELARLFDYYIKHNEEINMTGLV--LSSRKNLCIHS 541
N P V K+ + SRT +++++V+E+ +L +N+ + V L+SRKNLCI++
Sbjct: 205 NEKPPIVQKIYFTSRTHSQLQQLVQEIKKL------NNQTFSTPIRVVSLASRKNLCINN 258
Query: 542 E 542
E
Sbjct: 259 E 259
>sp|B4I0K4|RTEL1_DROSE Regulator of telomere elongation helicase 1 homolog OS=Drosophila
sechellia GN=GM12432 PE=3 SV=1
Length = 966
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 65/155 (41%), Gaps = 48/155 (30%)
Query: 427 MIDDLPVFFPYEYIYPEQYAYMVELKKALDAKGHCLLEMPSGTGKTTSLLSLIVAYM--- 483
+I +PV FP+E YP Q AYM ++ L + +LE P+GTGKT SLL +A++
Sbjct: 5 LIAGIPVHFPFE-PYPVQRAYMEKVIHCLRDGTNGVLESPTGTGKTLSLLCSSLAWIRTR 63
Query: 484 ------------------------------------NAHPLDVTKLLYCSRTVPEIEKVV 507
A+ V K++Y SRT ++ + +
Sbjct: 64 QSEHQMQMVKMEKADFSGIGGGAPGGDLSELAKTMGRANNWGVPKVIYASRTHSQLTQAM 123
Query: 508 EELARLFDYYIKHNEEINMTGLVLSSRKNLCIHSE 542
EL R NM +VL SR LCIH E
Sbjct: 124 RELKR--------TAYANMRSVVLGSRDQLCIHPE 150
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%)
Query: 580 LESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQK 639
L S + RD+ + + GQ ++++A +VPDG++ FF SY L V +W G+ ++
Sbjct: 507 LISNYANRDNPKYVSSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDAWQASGLWADISC 566
Query: 640 RKLLFIE 646
+K +F+E
Sbjct: 567 KKPIFLE 573
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 20/109 (18%)
Query: 51 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 110
P + I L ++G+ L +CPYF +R+ KI EL +++
Sbjct: 190 GPTIMDIEDLVKVGQRLKICPYFASRELARANKI-------------------ELG-NTI 229
Query: 111 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSA 159
V+ DEAHNI+ +C + SV+I + + +I + + D A
Sbjct: 230 VILDEAHNIEKICEEYASVQIKSSDVAMTIEDITHIRQVFASGESQDMA 278
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 20/109 (18%)
Query: 706 APGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSV 765
P + I L ++G+ L +CPYF +R+ KI EL +++
Sbjct: 190 GPTIMDIEDLVKVGQRLKICPYFASRELARANKI-------------------ELG-NTI 229
Query: 766 VVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSA 814
V+ DEAHNI+ +C + SV+I + + +I + + D A
Sbjct: 230 VILDEAHNIEKICEEYASVQIKSSDVAMTIEDITHIRQVFASGESQDMA 278
Score = 40.4 bits (93), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 541 SEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLL 600
S + RD+ + + GQ ++++A +VPDG++ FF SY L + L
Sbjct: 509 SNYANRDNPKYVSSLGQTILNVARIVPDGLLVFFPSYPMLNKCVDA-------WQASGLW 561
Query: 601 VDIACVVP 608
DI+C P
Sbjct: 562 ADISCKKP 569
>sp|Q1E5T3|CHL1_COCIM ATP-dependent RNA helicase CHL1 OS=Coccidioides immitis (strain RS)
GN=CHL1 PE=3 SV=1
Length = 861
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 26/229 (11%)
Query: 665 VDGRCHSLTSSSVRDRHK-----AGEN-IPVCDFYEKFDAVGREAPLAPGVYSITKLKEM 718
++ RC L SS+V HK + EN + + DF R+ LA V+ I + ++
Sbjct: 276 INERCLDLQSSNVLPGHKCPFAPSKENELAINDF--------RDHVLAE-VHDIEDIGKI 326
Query: 719 GRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVC 778
G+ G+CPY+ +R I H++IV Y LL + + L + V++ DEAHN+ +V
Sbjct: 327 GQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISL-KDHVIIIDEAHNLMDVI 385
Query: 779 VDSLSVRIN----RRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLRDAQSAR 834
+ SV ++ R +E+ + + LK A++ + + L +AR
Sbjct: 386 ANIHSVNVSLTQLRIGLEQLTIYARKYKARLKGKNRVYVAQVMRLLGSIAKYLESVLAAR 445
Query: 835 ETDVVLANPVLPDEILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYL 883
E + V P ++ GK GI + +R + SKL + + Y+
Sbjct: 446 E---LREGAVDPSYLMSGK---GIDQINLHKLSRYLQESKLARKVDGYI 488
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 16/129 (12%)
Query: 10 VDGRCHSLTSSSVRDRHK-----AGEN-IPVCDFYEKFDAVGREAPLAPGVYSITKLKEM 63
++ RC L SS+V HK + EN + + DF R+ LA V+ I + ++
Sbjct: 276 INERCLDLQSSNVLPGHKCPFAPSKENELAINDF--------RDHVLAE-VHDIEDIGKI 326
Query: 64 GRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEAHNIDNVC 123
G+ G+CPY+ +R I H++IV Y LL + + L + V++ DEAHN+ +V
Sbjct: 327 GQRTGICPYYASRSVIGHSEIVTLPYQLLLQKSARDALDISL-KDHVIIIDEAHNLMDVI 385
Query: 124 VDSLSVRIN 132
+ SV ++
Sbjct: 386 ANIHSVNVS 394
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 8/100 (8%)
Query: 583 VFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWY-------DQGIID 635
FE R+ ++I + G+ + +I PDGVV FF SY +L VV W + I+D
Sbjct: 616 TFEKRNSRAMIIDLGKTISEICKATPDGVVAFFPSYDFLNQVVEIWKQPCSNSGNPSILD 675
Query: 636 NLQKRKLLFIETQD-ALDSRSVSKERDGKIVDGRCHSLTS 674
+L K L E+++ A+++ ++ ++ I +G+ L S
Sbjct: 676 SLGLVKPLLYESKEKAMNTEALLQKYANFIDEGKGALLLS 715
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 543 FETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFE 585
FE R+ ++I + G+ + +I PDGVV FF SY +L V E
Sbjct: 617 FEKRNSRAMIIDLGKTISEICKATPDGVVAFFPSYDFLNQVVE 659
>sp|A7UXD4|CHL1_NEUCR ATP-dependent RNA helicase chl-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=chl-1 PE=3 SV=1
Length = 1073
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 583 VFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASW--YDQG-----IID 635
F R + ++I G +L+++ VVPDGVV FF SY YLE V+ W ++Q I +
Sbjct: 772 TFAKRSNPNMINRLGLVLLNLCSVVPDGVVAFFPSYGYLEEVIGVWKTHEQAMGPKTIWE 831
Query: 636 NLQKRKLLFIETQDALDSRSVSKERD 661
L+ +K LFI+++ +++ K D
Sbjct: 832 RLESKKALFIDSKTESSEQTLQKYSD 857
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%)
Query: 538 CIHSEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVF 584
C F R + ++I G +L+++ VVPDGVV FF SY YLE V
Sbjct: 768 CFDFTFAKRSNPNMINRLGLVLLNLCSVVPDGVVAFFPSYGYLEEVI 814
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 57 ITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEA 116
I L + G++L +CPY+ +R AI A+++ Y LL + L ++V+ DEA
Sbjct: 446 IEDLYQTGKQLQICPYYASRAAIPGAEVITLPYPLLLQKSAREALGIRL-EGNIVIIDEA 504
Query: 117 HNIDNVCVDSLSVRINRRTIEKA 139
HNI + + + I +++A
Sbjct: 505 HNIMDAVSNVHAAEIKYTDLKRA 527
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 712 ITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVFDEA 771
I L + G++L +CPY+ +R AI A+++ Y LL + L ++V+ DEA
Sbjct: 446 IEDLYQTGKQLQICPYYASRAAIPGAEVITLPYPLLLQKSAREALGIRL-EGNIVIIDEA 504
Query: 772 HNIDNVCVDSLSVRINRRTIEKA 794
HNI + + + I +++A
Sbjct: 505 HNIMDAVSNVHAAEIKYTDLKRA 527
>sp|A1D8E4|CHL1_NEOFI ATP-dependent RNA helicase chl1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=chl1
PE=3 SV=1
Length = 861
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 83/176 (47%), Gaps = 5/176 (2%)
Query: 709 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 768
+ I + ++G+ +G+CPY+ +R + H++IV Y LL + + + ++ VV+
Sbjct: 320 IKDIEDMGKLGKRMGICPYYASRSVLKHSEIVTLPYPLLLQRSARDALDLSI-KNHVVII 378
Query: 769 DEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLR 828
DEAHN+ + + SV I ++ A+ + T K + + + RL+ +
Sbjct: 379 DEAHNLMDAICNIHSVTITLSQLQTALSQLTTYARKHKARLKGKNRSYIAQIIRLISSIA 438
Query: 829 DA-QSARETDVVLANPVLPDEILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYL 883
D +S ++ V P +++ GK G+ + +R + SKL + + Y+
Sbjct: 439 DHLRSTIGENLPAEGAVDPSDLMAGK---GVDQINPYKLSRYLQESKLARKVDGYV 491
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 54 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 113
+ I + ++G+ +G+CPY+ +R + H++IV Y LL + + + ++ VV+
Sbjct: 320 IKDIEDMGKLGKRMGICPYYASRSVLKHSEIVTLPYPLLLQRSARDALDLSI-KNHVVII 378
Query: 114 DEAHNIDNVCVDSLSVRINRRTIEKAVGNIQT 145
DEAHN+ + + SV I ++ A+ + T
Sbjct: 379 DEAHNLMDAICNIHSVTITLSQLQTALSQLTT 410
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 583 VFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWY-------DQGIID 635
+++RD +I + G+ + + +PDGVV FF SY YL ++A W Q I+
Sbjct: 618 TYDSRDSEKMILDLGRTVAMLCQAIPDGVVAFFPSYDYLSRILAIWRKPLVGEKGQTILS 677
Query: 636 NLQKRKLLFIETQD 649
++++K + E +D
Sbjct: 678 LIERKKSILYEGRD 691
Score = 37.4 bits (85), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 536 NLCIHSEFE----TRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVF 584
N + SEF+ +RD +I + G+ + + +PDGVV FF SY YL +
Sbjct: 608 NGVLGSEFDFTYDSRDSEKMILDLGRTVAMLCQAIPDGVVAFFPSYDYLSRIL 660
>sp|A1CJ34|CHL1_ASPCL ATP-dependent RNA helicase chl1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=chl1 PE=3 SV=1
Length = 731
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 18/189 (9%)
Query: 641 KLLFIETQDALDSRSVSKERDGKIVDGRCHSLTSSSVRDRHKAGENIPVCDFYEKFDAVG 700
+++ +E A++ R + ++ G V+ RC L S + V F
Sbjct: 137 RVMKLENATAINERCMDLQQPGMAVEHRCPYLPSKD--------DEPQVLQF-------- 180
Query: 701 REAPLAPGVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKEL 760
R+ LA V I + ++G+ +G+CPY+ +R I H++IV Y LL + +
Sbjct: 181 RDHTLAT-VKDIEDMGKLGKHIGVCPYYASRSVIKHSEIVTLPYPLLLQRSAREALGLSI 239
Query: 761 ARSSVVVFDEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEY 820
++ +V+ DEAHN+ + + SV I ++ A+ + T K + + +
Sbjct: 240 -KNHIVIIDEAHNLMDAISNIHSVTITLSQLQTAIFQLTTYARKFKTRLKGKNRTYIAQV 298
Query: 821 ARLVEGLRD 829
RLV + D
Sbjct: 299 IRLVSSVAD 307
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Query: 54 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 113
V I + ++G+ +G+CPY+ +R I H++IV Y LL + + ++ +V+
Sbjct: 188 VKDIEDMGKLGKHIGVCPYYASRSVIKHSEIVTLPYPLLLQRSAREALGLSI-KNHIVII 246
Query: 114 DEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEADSAKLREEYARLVEGLR 173
DEAHN+ + + SV I ++ A+ + T K + + + RLV +
Sbjct: 247 DEAHNLMDAISNIHSVTITLSQLQTAIFQLTTYARKFKTRLKGKNRTYIAQVIRLVSSVA 306
Query: 174 D 174
D
Sbjct: 307 D 307
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 14/96 (14%)
Query: 562 IACVVPDGVV-CFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLY 620
+A + GV+ C F + +E+RD +I + G+ + + +PDGVV FF SY Y
Sbjct: 471 VAHTLAQGVMGCAF------DFTYESRDSEKMIIDLGRTVATLCQAIPDGVVAFFPSYDY 524
Query: 621 LESVVASW-------YDQGIIDNLQKRKLLFIETQD 649
L ++ W +Q I+ ++++K + E++D
Sbjct: 525 LSRILHIWKKPLGADKNQTILGLIERKKPILYESRD 560
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 543 FETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVFE 585
+E+RD +I + G+ + + +PDGVV FF SY YL +
Sbjct: 488 YESRDSEKMIIDLGRTVATLCQAIPDGVVAFFPSYDYLSRILH 530
>sp|Q6CIF0|CHL1_KLULA ATP-dependent RNA helicase CHL1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=CHL1 PE=3 SV=1
Length = 807
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 559 LVDIAC--VVPDGVVCFFTSYLYLESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFT 616
+V +C ++P+ + F +E+R++ SV+ L+++ C VP G+V FF
Sbjct: 558 IVQFSCNHIIPESNLDTFIVSEGFNFNYESRNNESVMCKLYDFLLELGCRVPHGIVVFFP 617
Query: 617 SYLYLESVVASWYDQGIIDNLQKRKLLFIETQDALD 652
SY YLE V+ W + I + L K +F ET D
Sbjct: 618 SYGYLEHVIKFWQLEEIFEKLSMNKRIFYETPGGSD 653
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 54 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 113
+ I L ++G L +CPY+ +R A+ A+IV Y ++L +I + L + S+V+
Sbjct: 298 ISDIEDLVQLGHSLHVCPYYSSRTALEGAEIVTLPYQHILSFEIRESLGINL-KDSIVII 356
Query: 114 DEAHNIDNVCVDSLSVRINRRTIE 137
DEAHN+ + S I+ I+
Sbjct: 357 DEAHNLMDTITSIYSCEISLSDIK 380
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 709 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 768
+ I L ++G L +CPY+ +R A+ A+IV Y ++L +I + L + S+V+
Sbjct: 298 ISDIEDLVQLGHSLHVCPYYSSRTALEGAEIVTLPYQHILSFEIRESLGINL-KDSIVII 356
Query: 769 DEAHNIDNVCVDSLSVRINRRTIE 792
DEAHN+ + S I+ I+
Sbjct: 357 DEAHNLMDTITSIYSCEISLSDIK 380
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 523 EINMTGLVLSSRKNLCIHSEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLES 582
E N+ ++S N +E+R++ SV+ L+++ C VP G+V FF SY YLE
Sbjct: 569 ESNLDTFIVSEGFNF----NYESRNNESVMCKLYDFLLELGCRVPHGIVVFFPSYGYLEH 624
Query: 583 V 583
V
Sbjct: 625 V 625
>sp|A5DUW8|CHL1_LODEL ATP-dependent RNA helicase CHL1 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=CHL1 PE=3 SV=1
Length = 892
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 709 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 768
+ I L ++G L CPY+ R+ I A+++ Y LL + + ++ ++S+++
Sbjct: 357 IRDIEDLGDLGSSLHTCPYYSVREGIKLAEVISLPYQLLLQSGSRDALKLDI-KNSIIII 415
Query: 769 DEAHNIDNVCVDSLSVRINRRTIEKAVGNIQT-LEGTLKEMKEADSAKLREEYARLVEGL 827
DEAHNI + SV+I + + + ++ + LK++ + L + +L + L
Sbjct: 416 DEAHNIFDTLTSLYSVKITAAQLSRTIKALKIYMTKFLKKLNSGNRINLM-KLTKLCKLL 474
Query: 828 RD-AQSARETDVVLANPVLPDEILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYL 883
D QS L + V+ +EI QG T G ++ K A +K SK+ +Q Y+
Sbjct: 475 MDFLQSDLAKSAKLGDQVVGEEIFQGST--GDLVNIHKMEAYLNK-SKIAFKLQSYM 528
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
Query: 54 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 113
+ I L ++G L CPY+ R+ I A+++ Y LL + + ++ ++S+++
Sbjct: 357 IRDIEDLGDLGSSLHTCPYYSVREGIKLAEVISLPYQLLLQSGSRDALKLDI-KNSIIII 415
Query: 114 DEAHNIDNVCVDSLSVRINRRTIEKAVGNIQT-LEGTLKEMKEADSAKLREEYARLVEGL 172
DEAHNI + SV+I + + + ++ + LK++ + L + +L + L
Sbjct: 416 DEAHNIFDTLTSLYSVKITAAQLSRTIKALKIYMTKFLKKLNSGNRINLM-KLTKLCKLL 474
Query: 173 RD-AQSARETDVVLANPVLPDEILQEVVPGNIRTAEHFVGFLKRFIEYLKTRLRVQQVVQ 231
D QS L + V+ +EI Q G++ +L + K + ++++
Sbjct: 475 MDFLQSDLAKSAKLGDQVVGEEIFQGST-GDLVNIHKMEAYLNKSKIAFKLQSYMEKIGV 533
Query: 232 ESPATFLKDISSKP 245
E T K SS P
Sbjct: 534 EDVGTDFKLNSSSP 547
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 577 YLYLESVFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDN 636
Y + ++ R+D+ + G+ L+ I +VP G+V F +SY L +V W + I
Sbjct: 654 YGNFDFLYNRRNDLDQFKRLGEFLIKICEIVPAGIVVFISSYQLLSDIVKIWRETTIYSR 713
Query: 637 LQKRKLLFIET 647
L K +F E+
Sbjct: 714 LNLLKQVFEES 724
Score = 33.9 bits (76), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 543 FETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESV 583
+ R+D+ + G+ L+ I +VP G+V F +SY L +
Sbjct: 661 YNRRNDLDQFKRLGEFLIKICEIVPAGIVVFISSYQLLSDI 701
>sp|A5DNW6|CHL1_PICGU ATP-dependent RNA helicase CHL1 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=CHL1 PE=3 SV=2
Length = 825
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 10/179 (5%)
Query: 709 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 768
+ I +L E+G +L +CPY+ +R+ I +++I+ Y LL + + + S+V+
Sbjct: 300 IKDIEELHELGADLKVCPYYASRRNIENSEIIALPYQMLLQQATRKSLGLSI-KDSIVII 358
Query: 769 DEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTL-KEMKEADSAKLRE--EYARLVE 825
DEAHN+ +V SV I R+ + + +++ K + + L + + LVE
Sbjct: 359 DEAHNLLDVISSINSVSITRKELSSVIASLKLYYNKFTKRLNSGNRIHLMKLIKLCSLVE 418
Query: 826 G-LRDAQSARETDVVLANPVLPDEILQGKTDYGIMIFADKRFARSDKRSKLPKWIQEYL 883
+++ + + V + VL DE+ QG T + I R + +SK+ IQ Y+
Sbjct: 419 TYIKNCEI--QNKCVPGSDVLIDELFQGSTGDLLNIH---RIEKYLDKSKIAYKIQTYI 472
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 54 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 113
+ I +L E+G +L +CPY+ +R+ I +++I+ Y LL + + + S+V+
Sbjct: 300 IKDIEELHELGADLKVCPYYASRRNIENSEIIALPYQMLLQQATRKSLGLSI-KDSIVII 358
Query: 114 DEAHNIDNVCVDSLSVRINRRTIEKAVGNIQ 144
DEAHN+ +V SV I R+ + + +++
Sbjct: 359 DEAHNLLDVISSINSVSITRKELSSVIASLK 389
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 584 FETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVVASWYDQGIIDNLQKRKLL 643
+ R+D S++R L DI VP+G++ F SY YL ++++W G + + K +
Sbjct: 597 YHKRNDPSMLRELALSLQDICERVPNGIIVFAPSYKYLNQLISTWRKDGNLAKISTLKQV 656
Query: 644 FIETQDALDSRSV 656
F+E+ D+ S+
Sbjct: 657 FLESSDSTSIESI 669
Score = 41.6 bits (96), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 525 NMTGLVLSSRKNLCIHSEFETRDDISVIRNYGQLLVDIACVVPDGVVCFFTSYLYLESVF 584
N+ L +SSRK + R+D S++R L DI VP+G++ F SY YL +
Sbjct: 579 NIEVLTVSSRKTTVFDFSYHKRNDPSMLRELALSLQDICERVPNGIIVFAPSYKYLNQLI 638
Query: 585 ET 586
T
Sbjct: 639 ST 640
>sp|Q6FKT4|CHL1_CANGA ATP-dependent RNA helicase CHL1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=CHL1 PE=3 SV=1
Length = 830
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%), Gaps = 4/92 (4%)
Query: 565 VVPDG-VVCFFTSYLYLESVFETRDDISVIRNY-GQLLVDIACVVPD--GVVCFFTSYLY 620
V+PD + + + E FE R+ +++++N+ ++++ +P G++ FF SY Y
Sbjct: 584 VIPDSHLRTYIVNEPQFEFTFEKRNSVNLVQNHLFNFYLELSTTIPKTGGIIGFFPSYKY 643
Query: 621 LESVVASWYDQGIIDNLQKRKLLFIETQDALD 652
L+ ++ SW G+ + L K + +F E +D D
Sbjct: 644 LDEIIVSWRKAGLFEKLDKERKVFYEMKDGPD 675
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 18/103 (17%)
Query: 54 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 113
++ I + ++G L +CPY+ AR I ++IV Y YLL + + +L + S+VV
Sbjct: 314 IHDIEDIAKVGESLAVCPYYAARDFIPSSEIVTLPYQYLLSESTRSQLRLDL-KGSIVVI 372
Query: 114 DEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEA 156
DEAHN+ VD+ + +I + E +L E+K++
Sbjct: 373 DEAHNL----VDT-------------INSIHSAEISLSELKQS 398
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 18/103 (17%)
Query: 709 VYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVVF 768
++ I + ++G L +CPY+ AR I ++IV Y YLL + + +L + S+VV
Sbjct: 314 IHDIEDIAKVGESLAVCPYYAARDFIPSSEIVTLPYQYLLSESTRSQLRLDL-KGSIVVI 372
Query: 769 DEAHNIDNVCVDSLSVRINRRTIEKAVGNIQTLEGTLKEMKEA 811
DEAHN+ VD+ + +I + E +L E+K++
Sbjct: 373 DEAHNL----VDT-------------INSIHSAEISLSELKQS 398
>sp|A7TTL0|CHL1_VANPO ATP-dependent RNA helicase CHL1 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=CHL1 PE=3 SV=1
Length = 829
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 53 GVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVV 112
GV+ I + +G L +CPY+ R +I A+I+ Y YLL + ++ +L+ +S+V+
Sbjct: 308 GVHDIEDILALGESLNVCPYYATRDSITSAEIITLPYQYLLSESTRDSLNIDLS-NSIVI 366
Query: 113 FDEAHNI 119
DEAHN+
Sbjct: 367 VDEAHNL 373
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 708 GVYSITKLKEMGRELGLCPYFLARQAIIHAKIVVYSYHYLLDPKIANVVSKELARSSVVV 767
GV+ I + +G L +CPY+ R +I A+I+ Y YLL + ++ +L+ +S+V+
Sbjct: 308 GVHDIEDILALGESLNVCPYYATRDSITSAEIITLPYQYLLSESTRDSLNIDLS-NSIVI 366
Query: 768 FDEAHNI 774
DEAHN+
Sbjct: 367 VDEAHNL 373
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 560 VDIAC--VVPD-GVVCFFTSYLYLESVFETRDDISVIRNY-GQLLVDIACVVP--DGVVC 613
V AC V+PD + + E F+ R + ++ + Q + ++ VP G+V
Sbjct: 575 VTFACDHVIPDDNLNTYIIEEPKFEFTFDKRQNPELVNKHLFQFFIKLSVNVPPTGGIVA 634
Query: 614 FFTSYLYLESVVASWYDQGIIDNLQKRKLLFIETQDALD 652
FF SY YL+ V+ +W G+ D L K + +F E+++ D
Sbjct: 635 FFPSYSYLQFVIDNWRSNGLFDKLNKIREIFYESKNGSD 673
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 328,854,051
Number of Sequences: 539616
Number of extensions: 13769485
Number of successful extensions: 40778
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 40137
Number of HSP's gapped (non-prelim): 530
length of query: 941
length of database: 191,569,459
effective HSP length: 127
effective length of query: 814
effective length of database: 123,038,227
effective search space: 100153116778
effective search space used: 100153116778
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)