BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11439
(91 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P52899|ODPA_CAEEL Probable pyruvate dehydrogenase E1 component subunit alpha,
mitochondrial OS=Caenorhabditis elegans GN=T05H10.6 PE=2
SV=1
Length = 397
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 59/83 (71%), Positives = 71/83 (85%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMDILAVREA ++A +C S KGP+++E ATYRY GHSMSDPGTSYRTR+EIQEVR+T
Sbjct: 248 VDGMDILAVREATKWAKEYCDSGKGPLMMEMATYRYHGHSMSDPGTSYRTREEIQEVRKT 307
Query: 66 RDPISSLKDKILNASLVTPEELK 88
RDPI+ KD+I+ +SL T EELK
Sbjct: 308 RDPITGFKDRIITSSLATEEELK 330
>sp|P26267|ODPA_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type I,
mitochondrial OS=Ascaris suum PE=1 SV=1
Length = 396
Score = 129 bits (323), Expect = 6e-30, Method: Composition-based stats.
Identities = 57/83 (68%), Positives = 71/83 (85%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMD+LAVR+A R+A C + KGP+++E ATYRYSGHSMSDPGTSYRTR+E+QEVR+T
Sbjct: 250 VDGMDVLAVRQAVRWAKEWCNAGKGPLMIEMATYRYSGHSMSDPGTSYRTREEVQEVRKT 309
Query: 66 RDPISSLKDKILNASLVTPEELK 88
RDPI+ KDKI+ A LVT +E+K
Sbjct: 310 RDPITGFKDKIVTAGLVTEDEIK 332
>sp|P29803|ODPAT_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Homo sapiens GN=PDHA2 PE=1 SV=1
Length = 388
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/84 (69%), Positives = 69/84 (82%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
+VDGMD+L VREA +FA N+CRS KGPIL+E TYRY GHSMSDPG SYRTR+EIQEVR
Sbjct: 251 KVDGMDVLCVREATKFAANYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRS 310
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
RDPI L+D+++N+ L T EELK
Sbjct: 311 KRDPIIILQDRMVNSKLATVEELK 334
>sp|P26268|ODPT_ASCSU Pyruvate dehydrogenase E1 component subunit alpha type II,
mitochondrial (Fragment) OS=Ascaris suum PE=2 SV=1
Length = 391
Score = 126 bits (317), Expect = 3e-29, Method: Composition-based stats.
Identities = 57/83 (68%), Positives = 69/83 (83%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMD+LAVR+A R+ C + KGP+++E ATYRY GHSMSDPGTSYRTR+EIQEVR+T
Sbjct: 245 VDGMDVLAVRQAIRWGKEWCNAGKGPLMIEMATYRYGGHSMSDPGTSYRTREEIQEVRKT 304
Query: 66 RDPISSLKDKILNASLVTPEELK 88
RDPI+ KDKI+ A LVT +ELK
Sbjct: 305 RDPITGFKDKIVTAGLVTEDELK 327
>sp|Q5R490|ODPA_PONAB Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Pongo abelii GN=PDHA1 PE=2 SV=1
Length = 390
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 67/83 (80%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMDIL VREA RFA +CRS KGPIL+E TYRY GHSMSDPG SYRTR+EIQEVR
Sbjct: 254 VDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSK 313
Query: 66 RDPISSLKDKILNASLVTPEELK 88
DPI LKD+++N++L + EELK
Sbjct: 314 SDPIMLLKDRMVNSNLASVEELK 336
>sp|P08559|ODPA_HUMAN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Homo sapiens GN=PDHA1 PE=1 SV=3
Length = 390
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 67/83 (80%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMDIL VREA RFA +CRS KGPIL+E TYRY GHSMSDPG SYRTR+EIQEVR
Sbjct: 254 VDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSK 313
Query: 66 RDPISSLKDKILNASLVTPEELK 88
DPI LKD+++N++L + EELK
Sbjct: 314 SDPIMLLKDRMVNSNLASVEELK 336
>sp|P29804|ODPA_PIG Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial (Fragment) OS=Sus scrofa GN=PDHA1 PE=1
SV=1
Length = 389
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 67/83 (80%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMDIL VREA RFA +CRS KGPIL+E TYRY GHSMSDPG SYRTR+EIQEVR
Sbjct: 253 VDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSK 312
Query: 66 RDPISSLKDKILNASLVTPEELK 88
DPI LKD+++N++L + EELK
Sbjct: 313 SDPIMLLKDRMVNSNLASVEELK 335
>sp|Q8HXW9|ODPA_MACFA Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Macaca fascicularis GN=PDHA1 PE=2 SV=1
Length = 390
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/83 (69%), Positives = 67/83 (80%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMDIL VREA RFA +CRS KGPIL+E TYRY GHSMSDPG SYRTR+EIQEVR
Sbjct: 254 VDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSK 313
Query: 66 RDPISSLKDKILNASLVTPEELK 88
DPI LKD+++N++L + EELK
Sbjct: 314 SDPIMLLKDRMVNSNLASVEELK 336
>sp|P26284|ODPA_RAT Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Rattus norvegicus GN=Pdha1 PE=1 SV=2
Length = 390
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 67/83 (80%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMDIL VREA +FA +CRS KGPIL+E TYRY GHSMSDPG SYRTR+EIQEVR
Sbjct: 254 VDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSK 313
Query: 66 RDPISSLKDKILNASLVTPEELK 88
DPI LKD+++N++L + EELK
Sbjct: 314 SDPIMLLKDRMVNSNLASVEELK 336
>sp|A7MB35|ODPA_BOVIN Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Bos taurus GN=PDHA1 PE=2 SV=1
Length = 390
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 67/83 (80%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMDIL VREA +FA +CRS KGPIL+E TYRY GHSMSDPG SYRTR+EIQEVR
Sbjct: 254 VDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSK 313
Query: 66 RDPISSLKDKILNASLVTPEELK 88
DPI LKD+++N++L + EELK
Sbjct: 314 SDPIMLLKDRMVNSNLASVEELK 336
>sp|P35486|ODPA_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Mus musculus GN=Pdha1 PE=1 SV=1
Length = 390
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 67/83 (80%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMDIL VREA +FA +CRS KGPIL+E TYRY GHSMSDPG SYRTR+EIQEVR
Sbjct: 254 VDGMDILCVREATKFAAAYCRSGKGPILMELQTYRYHGHSMSDPGVSYRTREEIQEVRSK 313
Query: 66 RDPISSLKDKILNASLVTPEELK 88
DPI LKD+++N++L + EELK
Sbjct: 314 SDPIMLLKDRMVNSNLASVEELK 336
>sp|A5A6L0|ODPA_PANTR Pyruvate dehydrogenase E1 component subunit alpha, somatic form,
mitochondrial OS=Pan troglodytes GN=PDHA1 PE=2 SV=1
Length = 390
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/83 (68%), Positives = 66/83 (79%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMDIL VREA RFA +CRS KGPIL+E TYRY GHSMS PG SYRTR+EIQEVR
Sbjct: 254 VDGMDILCVREATRFAAAYCRSGKGPILMELQTYRYHGHSMSGPGVSYRTREEIQEVRSK 313
Query: 66 RDPISSLKDKILNASLVTPEELK 88
DPI LKD+++N++L + EELK
Sbjct: 314 SDPIMLLKDRMVNSNLASVEELK 336
>sp|P52900|ODPA_SMIMA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
(Fragment) OS=Sminthopsis macroura GN=PDHA PE=2 SV=1
Length = 363
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/83 (66%), Positives = 66/83 (79%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMD+L VREA +FA +CRS KGP+L+E TYRY GHSMSDPG SYRTR+EIQEVR
Sbjct: 227 VDGMDVLCVREATKFAAAYCRSGKGPMLMELQTYRYHGHSMSDPGVSYRTREEIQEVRSK 286
Query: 66 RDPISSLKDKILNASLVTPEELK 88
DPI LKD+++N +L + EELK
Sbjct: 287 SDPIMLLKDRMVNNNLASIEELK 309
>sp|Q06437|ODPAT_RAT Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Rattus norvegicus GN=Pdha2 PE=1
SV=1
Length = 391
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 51/83 (61%), Positives = 67/83 (80%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
V+GMDIL+VREA +FA +HCRS KGPI++E TYRY GHSMSDPG SYRTR+E+Q VR
Sbjct: 255 VNGMDILSVREATKFAADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRTREEVQNVRSK 314
Query: 66 RDPISSLKDKILNASLVTPEELK 88
DPI L++++++ +L + EELK
Sbjct: 315 SDPIMLLRERMISNNLSSVEELK 337
>sp|P35487|ODPAT_MOUSE Pyruvate dehydrogenase E1 component subunit alpha, testis-specific
form, mitochondrial OS=Mus musculus GN=Pdha2 PE=2 SV=1
Length = 391
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 50/83 (60%), Positives = 64/83 (77%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
V+GMDIL VREA +FA +HCRS KGPI++E TYRY GHSMSDPG SYR+R+E+ VR
Sbjct: 255 VNGMDILCVREATKFAADHCRSGKGPIVMELQTYRYHGHSMSDPGISYRSREEVHNVRSK 314
Query: 66 RDPISSLKDKILNASLVTPEELK 88
DPI L+++I++ +L EELK
Sbjct: 315 SDPIMLLRERIISNNLSNIEELK 337
>sp|Q54C70|ODPA_DICDI Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=pdhA PE=1 SV=1
Length = 377
Score = 108 bits (271), Expect = 7e-24, Method: Composition-based stats.
Identities = 46/83 (55%), Positives = 63/83 (75%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
+VDGMD+ AV+EA ++A CR+ GPI+LE TYRY GHSMSDPG +YRTR+E+ VRQ
Sbjct: 244 KVDGMDVFAVKEAGKYAAEWCRAGNGPIILEMDTYRYVGHSMSDPGITYRTREEVNHVRQ 303
Query: 65 TRDPISSLKDKILNASLVTPEEL 87
TRDPI +++ IL+ + T ++L
Sbjct: 304 TRDPIENIRQIILDNKIATEDQL 326
>sp|P16387|ODPA_YEAST Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PDA1 PE=1 SV=2
Length = 420
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 64/84 (76%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
+V+GMDILAV +A++FA + C S KGP++LE TYRY GHSMSDPGT+YRTRDEIQ +R
Sbjct: 273 KVNGMDILAVYQASKFAKDWCLSGKGPLVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRS 332
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
DPI+ LK +++ + T E+K
Sbjct: 333 KNDPIAGLKMHLIDLGIATEAEVK 356
>sp|O13366|ODPA_KLULA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=PDA1 PE=3
SV=2
Length = 412
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 62/84 (73%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
+V+GMDILAV +A++FA + S GPI+LE TYRY GHSMSDPGT+YRTRDEIQ +R
Sbjct: 265 KVNGMDILAVYQASKFAKDWTVSGNGPIVLEYETYRYGGHSMSDPGTTYRTRDEIQHMRS 324
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
DPI+ LK +L + T +E+K
Sbjct: 325 KNDPIAGLKMHLLELGIATEDEIK 348
>sp|P52901|ODPA1_ARATH Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Arabidopsis thaliana GN=E1 ALPHA PE=1 SV=2
Length = 389
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
+VDGMD AV++A +FA H +KGPI+LE TYRY GHSMSDPG++YRTRDEI VRQ
Sbjct: 253 KVDGMDAFAVKQACKFAKQHAL-EKGPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQ 311
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
RDPI +K +L+ L T +ELK
Sbjct: 312 ERDPIERIKKLVLSHDLATEKELK 335
>sp|Q6Z5N4|ODPA1_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-1, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os02g0739600 PE=2
SV=1
Length = 390
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/84 (59%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
+VDGMD+LAV++A +FA H ++ GPI+LE TYRY GHSMSDPG++YRTRDEI VRQ
Sbjct: 254 KVDGMDVLAVKQACKFAKEHAIAN-GPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQ 312
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
RDPI ++ IL L T ELK
Sbjct: 313 ERDPIERVRKLILAHDLATAAELK 336
>sp|Q654V6|ODPA2_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Oryza sativa subsp. japonica GN=Os06g0246500 PE=2
SV=1
Length = 398
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
+VDGMD+LAV++A +FA H + GPI+LE TYRY GHSMSDPG++YRTRDEI +RQ
Sbjct: 262 KVDGMDVLAVKQACKFAKQHAL-ENGPIILEMDTYRYHGHSMSDPGSTYRTRDEIAGIRQ 320
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
RDPI ++ +L T +ELK
Sbjct: 321 ERDPIERVRKLLLAHDFATTQELK 344
>sp|Q8H1Y0|ODPA2_ARATH Pyruvate dehydrogenase E1 component subunit alpha-2, mitochondrial
OS=Arabidopsis thaliana GN=IAR4 PE=1 SV=2
Length = 393
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
+VDGMD LAV++A +FA H + GPI+LE TYRY GHSMSDPG++YRTRDEI VRQ
Sbjct: 257 KVDGMDALAVKQACKFAKEHALKN-GPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQ 315
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
RDPI ++ +L + T +ELK
Sbjct: 316 VRDPIERVRKLLLTHDIATEKELK 339
>sp|P52902|ODPA_PEA Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Pisum sativum PE=2 SV=1
Length = 397
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 62/84 (73%), Gaps = 1/84 (1%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
+VDGMD LAV++A +FA H + GPI+LE TYRY GHSMSDPG++YRTRDEI VRQ
Sbjct: 261 KVDGMDALAVKQACKFAKEHALKN-GPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQ 319
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
RDPI ++ +L+ + T +ELK
Sbjct: 320 ERDPIERVRKLLLSHDIATEKELK 343
>sp|P52903|ODPA_SOLTU Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Solanum tuberosum PE=1 SV=1
Length = 391
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMD+ AV++A FA H + GPI+LE TYRY GHSMSDPG++YRTRDEI VRQ
Sbjct: 256 VDGMDVFAVKQACTFAKQHALKN-GPIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQE 314
Query: 66 RDPISSLKDKILNASLVTPEELK 88
RDP+ ++ IL ++ T ELK
Sbjct: 315 RDPVERIRSLILAHNIATEAELK 337
>sp|Q9R9N5|ODPA_RHIME Pyruvate dehydrogenase E1 component subunit alpha OS=Rhizobium
meliloti (strain 1021) GN=pdhA PE=3 SV=1
Length = 348
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
+VDGMD+ AV+ AA AV HCRS KGPI+LE TYRY GHSMSDP YR++DE+Q++R
Sbjct: 232 QVDGMDVRAVKAAADEAVEHCRSGKGPIILEMLTYRYRGHSMSDP-AKYRSKDEVQKMRS 290
Query: 65 TRDPISSLKDKILNASLVTPEELKR 89
DPI +K ++ + T +ELK+
Sbjct: 291 EHDPIEQVKARLTDKGWATEDELKQ 315
>sp|Q10489|ODPA_SCHPO Pyruvate dehydrogenase E1 component subunit alpha, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pda1 PE=1 SV=1
Length = 409
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 59/83 (71%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
V+GMD+LAV +A++FA + + P+L+E TYRY GHSMSDPGT+YR+R+E+Q+VR
Sbjct: 271 VNGMDVLAVLQASKFAKKYTVENSQPLLMEFVTYRYGGHSMSDPGTTYRSREEVQKVRAA 330
Query: 66 RDPISSLKDKILNASLVTPEELK 88
RDPI LK I+ + ELK
Sbjct: 331 RDPIEGLKKHIMEWGVANANELK 353
>sp|O66112|ODPA_ZYMMO Pyruvate dehydrogenase E1 component subunit alpha OS=Zymomonas
mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
GN=pdhA PE=3 SV=1
Length = 354
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMD+L VR AA AV+ ++ KGPI+LE TYRY GHSMSDP YR+R+E+ ++++
Sbjct: 237 VDGMDVLEVRGAATVAVDWVQAGKGPIILEMKTYRYRGHSMSDPA-RYRSREEVNDMKEN 295
Query: 66 RDPISSLKDKILNASLVTPEELK 88
DP+ +LK + A + E +K
Sbjct: 296 HDPLDNLKKDLFAAGVPEAELVK 318
>sp|P51267|ODPA_PORPU Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
purpurea GN=pdhA PE=3 SV=1
Length = 344
Score = 79.0 bits (193), Expect = 8e-15, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
EVDGMD+LAVR+ A AV R +GP L+E TYR+ GHS++DP R+R E +E
Sbjct: 227 EVDGMDVLAVRQVAEKAVERARQGQGPTLIEALTYRFRGHSLADP-DELRSRQE-KEAWV 284
Query: 65 TRDPISSLKDKILNASLVTPEEL 87
RDPI LK IL+ + + +EL
Sbjct: 285 ARDPIKKLKKHILDNQIASSDEL 307
>sp|Q1XDM0|ODPA_PORYE Pyruvate dehydrogenase E1 component subunit alpha OS=Porphyra
yezoensis GN=pdhA PE=3 SV=1
Length = 346
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
EVDGMD+LAVR+AA+ AV R GP L+E TYR+ GHS++DP R+R E +E
Sbjct: 229 EVDGMDVLAVRQAAKQAVQRARQGDGPTLIEALTYRFRGHSLADP-DELRSRQE-KEAWV 286
Query: 65 TRDPISSLKDKILNASLVTPEEL 87
RDPI LK IL+ + EL
Sbjct: 287 ARDPIKKLKKYILDNEIANIGEL 309
>sp|Q7XTJ3|ODPA3_ORYSJ Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic
OS=Oryza sativa subsp. japonica GN=Os04g0119400 PE=2
SV=2
Length = 425
Score = 74.3 bits (181), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Query: 1 MENKEVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQ 60
M VDGMD+L VRE A+ A+ R +GP L+E TYR+ GHS++DP R DE +
Sbjct: 279 MPGVHVDGMDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADP-DELRRPDE-K 336
Query: 61 EVRQTRDPISSLKDKILNASLVTPEELK 88
RDPI++LK I+ +L T ELK
Sbjct: 337 SHYAARDPITALKKYIIEQNLATESELK 364
>sp|O24457|ODPA3_ARATH Pyruvate dehydrogenase E1 component subunit alpha-3, chloroplastic
OS=Arabidopsis thaliana GN=PDH-E1 ALPHA PE=1 SV=1
Length = 428
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 1 MENKEVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQ 60
M VDGMD+L VRE A+ AV R +GP L+E TYR+ GHS++DP RD +
Sbjct: 282 MPGVHVDGMDVLKVREVAKEAVTRARRGEGPTLVECETYRFRGHSLADPD---ELRDAAE 338
Query: 61 EVR-QTRDPISSLKDKILNASLVTPEELK 88
+ + RDPI++LK ++ L ELK
Sbjct: 339 KAKYAARDPIAALKKYLIENKLAKEAELK 367
>sp|Q92IS3|ODPA_RICCN Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
conorii (strain ATCC VR-613 / Malish 7) GN=pdhA PE=3
SV=1
Length = 326
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
++DGMD + + ++ A + R + P++LE TYRY GHSMSDP YR+++E+++ ++
Sbjct: 211 QLDGMDFEEMYDGSKQAAEYVRENSFPLILEVKTYRYRGHSMSDPA-KYRSKEEVEQYKE 269
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
RDP+ ++ IL+ VT +LK
Sbjct: 270 -RDPLVIIRKTILDNKYVTEADLK 292
>sp|Q4UKQ6|ODPA_RICFE Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
felis (strain ATCC VR-1525 / URRWXCal2) GN=pdhA PE=3
SV=1
Length = 326
Score = 68.6 bits (166), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
++DGMD + A+ A + R + P++LE TYRY GHSMSDP YR+++E+++ ++
Sbjct: 211 QLDGMDFEEMYNGAKQAAEYVRENSFPLILEVKTYRYRGHSMSDPA-KYRSKEEVEQYKE 269
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
RDP+ ++ IL+ T +LK
Sbjct: 270 -RDPLVIIRKTILDNKYATEADLK 292
>sp|Q1RJX4|ODPA_RICBR Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
bellii (strain RML369-C) GN=pdhA PE=3 SV=1
Length = 326
Score = 65.1 bits (157), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 53/84 (63%), Gaps = 2/84 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
+++GMD + + + A + R + P++LE TYRY GHSMSDP YR+++E++ ++
Sbjct: 211 QLNGMDFEEMYDGVKQAAEYVRENSMPLILEVKTYRYRGHSMSDPA-KYRSKEEVETYKE 269
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
RDPI+ ++ IL + + +LK
Sbjct: 270 -RDPITEIRKIILENNYASEADLK 292
>sp|Q68XA9|ODPA_RICTY Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
typhi (strain ATCC VR-144 / Wilmington) GN=pdhA PE=3
SV=1
Length = 326
Score = 63.2 bits (152), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
++DGMD + + + R + P++LE TYRY GHSMSDP YR+++E+ + ++
Sbjct: 211 QLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDPA-KYRSKEEVAKYKE 269
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
RD + ++ IL+ T E+LK
Sbjct: 270 -RDTLVRIRQIILDNKYATEEDLK 292
>sp|Q9ZDR4|ODPA_RICPR Pyruvate dehydrogenase E1 component subunit alpha OS=Rickettsia
prowazekii (strain Madrid E) GN=pdhA PE=3 SV=1
Length = 326
Score = 62.8 bits (151), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQ 64
++DGMD + + + R + P++LE TYRY GHSMSDP YR+++E+++ ++
Sbjct: 211 QLDGMDFEEMYNGTKQVAEYVRENSFPVILEVKTYRYRGHSMSDPA-KYRSKEEVEKYKE 269
Query: 65 TRDPISSLKDKILNASLVTPEELK 88
RD + +++ IL+ T +LK
Sbjct: 270 -RDTLVRIREIILDNKYATEADLK 292
>sp|P75390|ODPA_MYCPN Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=pdhA PE=3 SV=1
Length = 358
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDG D++A EA A N+ RS GP+L+E ++R H+ SD + YRT++E E ++
Sbjct: 224 VDGNDLIASYEAMHEAANYARSGNGPVLIEFFSWRQGPHTTSDDPSIYRTKEEEAEAMKS 283
Query: 66 RDPISSLKDKILNASLVTPEE 86
DP+ L++ + + ++TP++
Sbjct: 284 -DPVKRLRNFLFDRGILTPQQ 303
>sp|O31404|ACOA_BACSU Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
OS=Bacillus subtilis (strain 168) GN=acoA PE=2 SV=2
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 1 MENKEVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQ 60
M VDG DILAV +AA A+ R+ GP L+E TYR GH D T Y+T+DE
Sbjct: 208 MPGVTVDGKDILAVYQAAEEAIERARNGGGPSLIECMTYRNYGHFEGDAQT-YKTKDERV 266
Query: 61 EVRQTRDPISSLKDKILNAS 80
E + +D I K+ +L +
Sbjct: 267 EHLEEKDAIQGFKNYLLKET 286
>sp|Q4MTG0|ODPA_BACCE Pyruvate dehydrogenase E1 component subunit alpha OS=Bacillus
cereus GN=pdhA PE=1 SV=3
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMS-DPGTSYRTRDEIQEVR 63
+VDGMD LAV A FA + +GP L+ET T+RY H+M+ D T YRT+D I+
Sbjct: 235 QVDGMDPLAVYAATAFARERAVNGEGPTLIETLTFRYGPHTMAGDDPTRYRTKD-IENEW 293
Query: 64 QTRDPISSLKDKILNASLVTPE 85
+ +DPI + + N L + E
Sbjct: 294 EQKDPIVRFRAFLENKGLWSQE 315
>sp|P60090|ODPA_STAAW Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MW2) GN=pdhA PE=3 SV=1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMS-DPGTSYRTRDEIQEVR 63
+VDGMD LAV +A + A + + +GP L+ET TYRY H+M+ D T YRT DE E
Sbjct: 234 QVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAE-W 292
Query: 64 QTRDPISSLKDKILNASL 81
+ +DP+ + + N L
Sbjct: 293 EKKDPLVRFRKFLENKGL 310
>sp|Q6GAC1|ODPA_STAAS Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MSSA476) GN=pdhA PE=3 SV=1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMS-DPGTSYRTRDEIQEVR 63
+VDGMD LAV +A + A + + +GP L+ET TYRY H+M+ D T YRT DE E
Sbjct: 234 QVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAE-W 292
Query: 64 QTRDPISSLKDKILNASL 81
+ +DP+ + + N L
Sbjct: 293 EKKDPLVRFRKFLENKGL 310
>sp|Q6GHZ2|ODPA_STAAR Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain MRSA252) GN=pdhA PE=3 SV=1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMS-DPGTSYRTRDEIQEVR 63
+VDGMD LAV +A + A + + +GP L+ET TYRY H+M+ D T YRT DE E
Sbjct: 234 QVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAE-W 292
Query: 64 QTRDPISSLKDKILNASL 81
+ +DP+ + + N L
Sbjct: 293 EKKDPLVRFRKFLENKGL 310
>sp|Q820A6|ODPA_STAAN Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain N315) GN=pdhA PE=1 SV=1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMS-DPGTSYRTRDEIQEVR 63
+VDGMD LAV +A + A + + +GP L+ET TYRY H+M+ D T YRT DE E
Sbjct: 234 QVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAE-W 292
Query: 64 QTRDPISSLKDKILNASL 81
+ +DP+ + + N L
Sbjct: 293 EKKDPLVRFRKFLENKGL 310
>sp|P60089|ODPA_STAAM Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=pdhA PE=1 SV=1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMS-DPGTSYRTRDEIQEVR 63
+VDGMD LAV +A + A + + +GP L+ET TYRY H+M+ D T YRT DE E
Sbjct: 234 QVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAE-W 292
Query: 64 QTRDPISSLKDKILNASL 81
+ +DP+ + + N L
Sbjct: 293 EKKDPLVRFRKFLENKGL 310
>sp|Q5HGZ1|ODPA_STAAC Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus
aureus (strain COL) GN=pdhA PE=3 SV=1
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 5 EVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMS-DPGTSYRTRDEIQEVR 63
+VDGMD LAV +A + A + + +GP L+ET TYRY H+M+ D T YRT DE E
Sbjct: 234 QVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAE-W 292
Query: 64 QTRDPISSLKDKILNASL 81
+ +DP+ + + N L
Sbjct: 293 EKKDPLVRFRKFLENKGL 310
>sp|P47516|ODPA_MYCGE Pyruvate dehydrogenase E1 component subunit alpha OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=pdhA PE=3 SV=1
Length = 358
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDG D++A EA + A N+ R GP+L+E +YR H+ SD + YRT+ E +E ++
Sbjct: 224 VDGNDLIASYEAMQDAANYARGGNGPVLIEFFSYRQGPHTTSDDPSIYRTKQEEEEGMKS 283
Query: 66 RDPISSLKDKILNASLV 82
DP+ L++ + + S++
Sbjct: 284 -DPVKRLRNFLFDRSIL 299
>sp|Q54M22|ODBA_DICDI 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1
Length = 441
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 42/74 (56%)
Query: 1 MENKEVDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQ 60
M+ VDG DI AV + A ++ P+L+E TYR HS SD + YRT +EI
Sbjct: 282 MKTIRVDGNDIWAVYNVTKLARKIAVEEQVPVLIEAMTYRVGHHSTSDDSSRYRTVEEIN 341
Query: 61 EVRQTRDPISSLKD 74
++ ++PIS L++
Sbjct: 342 AWKEGKNPISRLRN 355
>sp|P50136|ODBA_MOUSE 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus
musculus GN=Bckdha PE=1 SV=1
Length = 442
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDG D+ AV A + A ++ P L+E TYR HS SD ++YR+ DE+ +
Sbjct: 295 VDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQ 354
Query: 66 RDPISSLKDKILNASLVTPEELK 88
PIS L+ +LN E+ K
Sbjct: 355 DHPISRLRQYLLNQGWWDEEQEK 377
>sp|P11960|ODBA_RAT 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial
(Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1
Length = 441
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 43/83 (51%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDG D+ AV A + A ++ P L+E TYR HS SD ++YR+ DE+ +
Sbjct: 294 VDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQ 353
Query: 66 RDPISSLKDKILNASLVTPEELK 88
PIS L+ +LN E+ K
Sbjct: 354 DHPISRLRQYLLNQGWWDEEQEK 376
>sp|Q72GU1|ODBA_THET2 2-oxoisovalerate dehydrogenase subunit alpha OS=Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
GN=TT_C1757 PE=3 SV=1
Length = 367
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 6 VDGMDILAVREAARFAVNHCRSDKGPILLETATYRYSGHSMSDPGTSYRTRDEIQEVRQT 65
VDGMD+LA + AV R +GP L+E YRY HS +D + YR ++E+ R+
Sbjct: 235 VDGMDVLASYYVVKEAVERARRGEGPSLVELRVYRYGPHSSADDDSRYRPKEEVAFWRK- 293
Query: 66 RDPISSLK 73
+DPI +
Sbjct: 294 KDPIPRFR 301
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,499,979
Number of Sequences: 539616
Number of extensions: 1076814
Number of successful extensions: 2220
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2135
Number of HSP's gapped (non-prelim): 87
length of query: 91
length of database: 191,569,459
effective HSP length: 61
effective length of query: 30
effective length of database: 158,652,883
effective search space: 4759586490
effective search space used: 4759586490
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 55 (25.8 bits)