Query psy11446
Match_columns 150
No_of_seqs 138 out of 1039
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 18:42:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11446.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11446hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qmc_A GGT, gamma-glutamyltran 100.0 1.1E-51 3.6E-56 351.9 14.0 146 2-149 41-191 (377)
2 2v36_A Gamma-glutamyltranspept 100.0 4.2E-51 1.4E-55 348.2 15.8 146 2-149 26-177 (376)
3 2dg5_A Gamma-glutamyltranspept 100.0 2.1E-51 7.2E-56 349.0 12.7 145 2-148 30-179 (366)
4 2i3o_A Gamma-glutamyltransfera 100.0 1.1E-49 3.6E-54 350.9 13.8 146 2-149 18-166 (516)
5 2e0w_A Gamma-glutamyltranspept 100.0 1E-49 3.4E-54 353.6 13.5 146 2-149 30-180 (556)
6 3g9k_L Capsule biosynthesis pr 100.0 4.4E-49 1.5E-53 330.0 14.4 134 2-150 26-159 (323)
7 2nlz_A Cephalosporin acylase; 100.0 5.6E-49 1.9E-53 348.2 14.1 144 2-148 29-175 (547)
8 1apy_A Aspartylglucosaminidase 95.1 0.032 1.1E-06 42.1 5.2 42 3-45 13-56 (162)
9 1k2x_A Putative L-asparaginase 94.0 0.08 2.8E-06 40.4 5.2 41 4-44 32-72 (177)
10 2gez_A L-asparaginase alpha su 93.8 0.092 3.2E-06 40.7 5.2 41 4-44 35-75 (195)
11 4gdv_A L-asparaginase; NTN enz 93.7 0.079 2.7E-06 43.7 5.1 40 4-44 30-70 (310)
12 3c17_A L-asparaginase precurso 91.1 0.31 1E-05 40.4 5.3 41 4-44 32-72 (320)
13 1p4k_A N(4)-(beta-N-acetylgluc 90.9 0.31 1.1E-05 39.9 5.1 39 5-44 16-56 (295)
14 2a8j_A Taspase 1, threonine as 89.3 0.49 1.7E-05 40.6 5.3 40 4-44 66-106 (420)
15 3gxq_A Putative regulator of t 56.4 4 0.00014 24.3 1.1 15 3-17 35-49 (54)
16 1x58_A Hypothetical protein 49 39.7 24 0.0008 22.2 2.8 24 91-116 12-35 (62)
17 3ox4_A Alcohol dehydrogenase 2 38.3 47 0.0016 27.2 5.2 84 17-105 97-203 (383)
No 1
>2qmc_A GGT, gamma-glutamyltranspeptidase; NTN-hydrolase, transferase; HET: GTB; 1.55A {Helicobacter pylori} PDB: 2qm6_A* 3fnm_A* 2nqo_A
Probab=100.00 E-value=1.1e-51 Score=351.91 Aligned_cols=146 Identities=27% Similarity=0.418 Sum_probs=137.0
Q ss_pred CchHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcCCCCCCccCeeeEEEECCCCcEEEEeeeccccccCCcchhcCC---
Q psy11446 2 KLNVGLSTCRNILRKGGNAVDAAITALLCDGLSCPQSMGLGGGFLMTLYNKTTGKAYAINAREKAPAAATLGMFHGN--- 78 (150)
Q Consensus 2 ~~~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P~~~giGGg~~~l~~~~~~~~~~~id~~~~aP~~~~~~~~~~~--- 78 (150)
+|++||++|++||++||||||||||+++||+|||||+||||||+|||||+ +++++++||+||+||+.++.+||.+.
T Consensus 41 ~~plAs~aG~~IL~~GGNAvDAAVAaa~~L~VveP~~sGiGGggF~li~~-~~~~~~~id~re~AP~~at~d~~~~~~g~ 119 (377)
T 2qmc_A 41 SHPLASEIGQKVLEEGGNAIDAAVAIGFALAVVHPAAGNIGGGGFAVIHL-ANGENVALDFREKAPLKATKNMFLDKQGN 119 (377)
T ss_dssp SSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEEC-TTSCEEEEEECCBCCTTCCTTTTBCTTSC
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEe-CCCCEEEEEeeccCcccCCHHHHhhccCC
Confidence 68999999999999999999999999999999999999999999999999 67999999999999999999999754
Q ss_pred --ccccccCCcccccchHHHHHHHHHHHcCCCCChHHhhHHHHHHhhCCCccCHHHHHHHHHhHHHhhcCCCC
Q psy11446 79 --YKAAQTGALAAAIPAEVLGYWTVYHRFGGGVPWRDLFEEPIALALNGVNINHHLAKNIRLYEDHIRRSPQL 149 (150)
Q Consensus 79 --~~~~~~g~~sv~VPG~~~g~~~~~~~~gG~l~w~~ll~PaI~lA~~Gf~v~~~l~~~l~~~~~~l~~~p~~ 149 (150)
+..+..|+++|+|||+++||+++|+|| |+|||++||+|||+|||+||+|++.+++.|+...+.|+++|++
T Consensus 120 ~~~~~~~~G~~av~VPG~v~g~~~a~~~~-G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~~p~~ 191 (377)
T 2qmc_A 120 VVPKLSEDGYLAAGVPGTVAGMEAMLKKY-GTKKLSQLIDPAIKLAENGYAISQRQAETLKEARERFLKYSSS 191 (377)
T ss_dssp BCTTTTTSSGGGCCBCCHHHHHHHHHHHH-CCSCHHHHTHHHHHHHHHCEECCHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCccccCCCcccccchHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHhcChhH
Confidence 234578999999999999999999999 9999999999999999999999999999999888888877653
No 2
>2v36_A Gamma-glutamyltranspeptidase large chain; transferase, glutathione biosynthesis, gamma-glutamyl transferase, acyltransferase, zymogen; 1.85A {Bacillus subtilis} PDB: 3a75_A*
Probab=100.00 E-value=4.2e-51 Score=348.16 Aligned_cols=146 Identities=29% Similarity=0.466 Sum_probs=137.3
Q ss_pred CchHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcCCCCCCccCeeeEEEECCCCcEEEEeeeccccccCCcchhcCCc--
Q psy11446 2 KLNVGLSTCRNILRKGGNAVDAAITALLCDGLSCPQSMGLGGGFLMTLYNKTTGKAYAINAREKAPAAATLGMFHGNY-- 79 (150)
Q Consensus 2 ~~~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P~~~giGGg~~~l~~~~~~~~~~~id~~~~aP~~~~~~~~~~~~-- 79 (150)
+|++||++|++||++||||||||||+++||+|||||+||||||+|||||+++++++++||+||+||+.++.+||.+..
T Consensus 26 ~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~sGiGGggf~li~~~~~~~~~~id~re~AP~~a~~~~~~~~~g~ 105 (376)
T 2v36_A 26 AHPLASEIGADVLKKGGNAIDAAVAIQFALNVTEPMMSGIGGGGFMMVYDGKTKDTTIIDSRERAPAGATPDMFLDENGK 105 (376)
T ss_dssp SSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSTTTCSTTSEEEEEEECTTTCCEEEEECCCBCCTTCCTTTTBCSSSC
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEECCCCcEEEEEeeccCcccCCHhHhhhccCC
Confidence 689999999999999999999999999999999999999999999999999889999999999999999999997432
Q ss_pred cc----cccCCcccccchHHHHHHHHHHHcCCCCChHHhhHHHHHHhhCCCccCHHHHHHHHHhHHHhhcCCCC
Q psy11446 80 KA----AQTGALAAAIPAEVLGYWTVYHRFGGGVPWRDLFEEPIALALNGVNINHHLAKNIRLYEDHIRRSPQL 149 (150)
Q Consensus 80 ~~----~~~g~~sv~VPG~~~g~~~~~~~~gG~l~w~~ll~PaI~lA~~Gf~v~~~l~~~l~~~~~~l~~~p~~ 149 (150)
.+ +..|+++|+|||+++||+++|+|| |+|||++||+|||+|||+||+|++.+++.|+...+.|++ |++
T Consensus 106 ~~~~~~~~~G~~av~VPG~v~g~~~a~~~~-G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~-~~~ 177 (376)
T 2v36_A 106 AIPFSERVTKGTAVGVPGTLKGLEEALDKW-GTRSMKQLITPSIKLAEKGFPIDSVLAEAISDYQEKLSR-TAA 177 (376)
T ss_dssp BCCHHHHTTSGGGCCBCCHHHHHHHHHHHH-CSSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTHHHHTT-STT
T ss_pred cCCcccccCCCccccCchHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHhcC-hhH
Confidence 22 368999999999999999999999 999999999999999999999999999999988888887 765
No 3
>2dg5_A Gamma-glutamyltranspeptidase; gamma-glutamyltransferase, GGT, gamma-GT, glutathione; HET: GLU; 1.60A {Escherichia coli K12} SCOP: d.153.1.6 PDB: 2dbu_A 2dbw_A* 2dbx_A* 2e0x_A 2e0y_A 2z8i_A* 2z8j_A* 2z8k_A*
Probab=100.00 E-value=2.1e-51 Score=349.00 Aligned_cols=145 Identities=32% Similarity=0.487 Sum_probs=136.0
Q ss_pred CchHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcCCCCCCccCeeeEEEECCCCcEEEEeeeccccccCCcchhcCC---
Q psy11446 2 KLNVGLSTCRNILRKGGNAVDAAITALLCDGLSCPQSMGLGGGFLMTLYNKTTGKAYAINAREKAPAAATLGMFHGN--- 78 (150)
Q Consensus 2 ~~~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P~~~giGGg~~~l~~~~~~~~~~~id~~~~aP~~~~~~~~~~~--- 78 (150)
+|++||++|++||++||||||||||+++||+|||||+||||||+|||||++ ++++++||+||+||+.++.+||.+.
T Consensus 30 ~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~~GiGGggF~li~~~-~~~~~~id~re~AP~~a~~~~~~~~~g~ 108 (366)
T 2dg5_A 30 VDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRSK-NGNTTAIDFREMAPAKATRDMFLDDQGN 108 (366)
T ss_dssp SCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEECT-TSCEEEEEECCBCCTTCCTTTTBCTTSC
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhccccCCCCCCeEEEEEcC-CCCEEEEeeeecCcccCCHHHHhhccCC
Confidence 689999999999999999999999999999999999999999999999998 7899999999999999999999754
Q ss_pred --ccccccCCcccccchHHHHHHHHHHHcCCCCChHHhhHHHHHHhhCCCccCHHHHHHHHHhHHHhhcCCC
Q psy11446 79 --YKAAQTGALAAAIPAEVLGYWTVYHRFGGGVPWRDLFEEPIALALNGVNINHHLAKNIRLYEDHIRRSPQ 148 (150)
Q Consensus 79 --~~~~~~g~~sv~VPG~~~g~~~~~~~~gG~l~w~~ll~PaI~lA~~Gf~v~~~l~~~l~~~~~~l~~~p~ 148 (150)
+..+..|+++|+|||+++||+++|+|| |+|||++||+|||+|||+||+|++.+++.|+...+.|.++|+
T Consensus 109 ~~~~~~~~G~~av~VPG~v~g~~~a~~~~-G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~~~~ 179 (366)
T 2dg5_A 109 PDSKKSLTSHLASGTPGTVAGFSLALDKY-GTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVLPNHE 179 (366)
T ss_dssp BCHHHHHTSGGGCCBCCHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTGGGTGGGSH
T ss_pred cCCCccCCCCcccccchHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHHhcCch
Confidence 234568999999999999999999999 999999999999999999999999999999988777777663
No 4
>2i3o_A Gamma-glutamyltransferase related protein; structural genomics, PSI, protein structure initiative; 2.03A {Thermoplasma acidophilum} SCOP: d.153.1.6
Probab=100.00 E-value=1.1e-49 Score=350.89 Aligned_cols=146 Identities=21% Similarity=0.340 Sum_probs=137.7
Q ss_pred CchHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcCCCCCCccCeeeEEEECCCCcEEEEeeeccccccCCcchhcCC--c
Q psy11446 2 KLNVGLSTCRNILRKGGNAVDAAITALLCDGLSCPQSMGLGGGFLMTLYNKTTGKAYAINAREKAPAAATLGMFHGN--Y 79 (150)
Q Consensus 2 ~~~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P~~~giGGg~~~l~~~~~~~~~~~id~~~~aP~~~~~~~~~~~--~ 79 (150)
+|++||++|++||++||||||||||+++||+|||||+||||||+|||||++ ++++++||+||+||+.++.++|.+. .
T Consensus 18 ~~~lAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~~GiGGggf~lv~~~-~~~~~~id~r~~AP~~a~~~~~~~~g~~ 96 (516)
T 2i3o_A 18 SSELASLAGRDILKRGGNIFDAALAVSAMLCVTQNNLCGLGGDLFALIRDE-NGQIMDLNGSGQASRAVSIDYYESMGLT 96 (516)
T ss_dssp SBHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHSTTSCCTTSEEEEEEECT-TCCEEEEEECCCBCTTCCHHHHHTTTCS
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCceEEEEEeC-CCcEEEEECCcCCcccCCHHHHhhcCCC
Confidence 689999999999999999999999999999999999999999999999998 7899999999999999999999654 2
Q ss_pred cccccCCcc-cccchHHHHHHHHHHHcCCCCChHHhhHHHHHHhhCCCccCHHHHHHHHHhHHHhhcCCCC
Q psy11446 80 KAAQTGALA-AAIPAEVLGYWTVYHRFGGGVPWRDLFEEPIALALNGVNINHHLAKNIRLYEDHIRRSPQL 149 (150)
Q Consensus 80 ~~~~~g~~s-v~VPG~~~g~~~~~~~~gG~l~w~~ll~PaI~lA~~Gf~v~~~l~~~l~~~~~~l~~~p~~ 149 (150)
.++..|+++ |+|||+++||+++|+|| |+|||++||+|||+|||+||+|++.+++.|+...+.|+++|++
T Consensus 97 ~~~~~G~~a~v~VPG~v~g~~~a~~~~-G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~~~~~ 166 (516)
T 2i3o_A 97 KIPERGPYAAITVPGIAGSWDEIFRKF-ATMDIADILEPAIRTASAGFPITQNYSDSIARSAPVIGQYRGW 166 (516)
T ss_dssp SCCSSSTTTCCBCCCHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHTTCHHH
T ss_pred cCCCCCCcccCcCchHHHHHHHHHHHh-CCCCHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHhhcChhH
Confidence 467899999 99999999999999999 9999999999999999999999999999999888888877643
No 5
>2e0w_A Gamma-glutamyltranspeptidase; NTN hydrolase, precursor, gamma-GTP, post-translational PROC maturation, transferase; 2.55A {Escherichia coli K12} SCOP: d.153.1.6
Probab=100.00 E-value=1e-49 Score=353.58 Aligned_cols=146 Identities=31% Similarity=0.469 Sum_probs=126.8
Q ss_pred CchHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcCCCCCCccCeeeEEEECCCCcEEEEeeeccccccCCcchhcCC---
Q psy11446 2 KLNVGLSTCRNILRKGGNAVDAAITALLCDGLSCPQSMGLGGGFLMTLYNKTTGKAYAINAREKAPAAATLGMFHGN--- 78 (150)
Q Consensus 2 ~~~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P~~~giGGg~~~l~~~~~~~~~~~id~~~~aP~~~~~~~~~~~--- 78 (150)
+|++||++|++||++||||||||||+++||+|||||+||||||+|||||+ +++++++||+||+||+.++.+||.+.
T Consensus 30 ~~plAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~sGiGGggf~lv~~-~~~~~~~id~re~AP~~at~d~~~~~~g~ 108 (556)
T 2e0w_A 30 VDATATQVGVDILKEGGNAVDAAVAVGYALAVTHPQAGNLGGGGFMLIRS-KNGNTTAIDFREMAPAKATRDMFLDDQGN 108 (556)
T ss_dssp SSHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCTTTCCSSSEEEEEEEC-TTSCEEEEEECCBCCCC------------
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhcccccCCCCCeEEEEEe-CCCCEEEEEeeccCcccCCHhHHhhccCC
Confidence 68999999999999999999999999999999999999999999999999 67999999999999999999999754
Q ss_pred --ccccccCCcccccchHHHHHHHHHHHcCCCCChHHhhHHHHHHhhCCCccCHHHHHHHHHhHHHhhcCCCC
Q psy11446 79 --YKAAQTGALAAAIPAEVLGYWTVYHRFGGGVPWRDLFEEPIALALNGVNINHHLAKNIRLYEDHIRRSPQL 149 (150)
Q Consensus 79 --~~~~~~g~~sv~VPG~~~g~~~~~~~~gG~l~w~~ll~PaI~lA~~Gf~v~~~l~~~l~~~~~~l~~~p~~ 149 (150)
+..+..|+++|+|||+++||+++|+|| |||||++||+|||+|||+||+|++.+++.|+...+.|.++|++
T Consensus 109 ~~~~~~~~G~~av~VPG~v~g~~~a~~~~-G~Lpw~~ll~PAI~lA~~Gf~V~~~la~~~~~~~~~l~~~p~~ 180 (556)
T 2e0w_A 109 PDSKKSLTSHLASGTPGTVAGFSLALDKY-GTMPLNKVVQPAFKLARDGFIVNDALADDLKTYGSEVLPNHEN 180 (556)
T ss_dssp --------CCCCCCBCCHHHHHHHHHHHH-CSSCHHHHHHHHHHHHHHCEECCHHHHHHHHHTHHHHSTTSHH
T ss_pred cCCccccCCccccccchhHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCCcCCHHHHHHHHHhHHHhhcCchH
Confidence 234578999999999999999999999 9999999999999999999999999999999988888888754
No 6
>3g9k_L Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_L*
Probab=100.00 E-value=4.4e-49 Score=329.97 Aligned_cols=134 Identities=24% Similarity=0.357 Sum_probs=123.8
Q ss_pred CchHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcCCCCCCccCeeeEEEECCCCcEEEEeeeccccccCCcchhcCCccc
Q psy11446 2 KLNVGLSTCRNILRKGGNAVDAAITALLCDGLSCPQSMGLGGGFLMTLYNKTTGKAYAINAREKAPAAATLGMFHGNYKA 81 (150)
Q Consensus 2 ~~~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P~~~giGGg~~~l~~~~~~~~~~~id~~~~aP~~~~~~~~~~~~~~ 81 (150)
+|++||++|++||++||||||||||+++||+|||||+||||||+|||||+++ +++ +|||||+||..+
T Consensus 26 ~~~lAs~aG~~iL~~GGNAvDAAVA~a~~l~VveP~~sGiGGggf~li~~~~-~~~-~id~r~~AP~~a----------- 92 (323)
T 3g9k_L 26 SHPLAVEEGMKVLKNGGSAVDAAIVVSYVLGVVELHASGIGGGGGMLIISKD-KET-FIDYRETTPYFT----------- 92 (323)
T ss_dssp SSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCTTSEEEEEEECSS-CEE-EEECCCBCCC-------------
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCCeEEEEEeCC-CCE-EEEeeccCcHhH-----------
Confidence 6899999999999999999999999999999999999999999999999996 889 999999999886
Q ss_pred cccCCcccccchHHHHHHHHHHHcCCCCChHHhhHHHHHHhhCCCccCHHHHHHHHHhHHHhhcCCCCC
Q psy11446 82 AQTGALAAAIPAEVLGYWTVYHRFGGGVPWRDLFEEPIALALNGVNINHHLAKNIRLYEDHIRRSPQLT 150 (150)
Q Consensus 82 ~~~g~~sv~VPG~~~g~~~~~~~~gG~l~w~~ll~PaI~lA~~Gf~v~~~l~~~l~~~~~~l~~~p~~~ 150 (150)
..|.++|+|||+++||+++|+|| |+|||++||+|||+|||+||+|++.++..|+...+.|.++|+++
T Consensus 93 -~~G~~av~VPG~v~g~~~a~~~~-G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~~~~~~ 159 (323)
T 3g9k_L 93 -GNQKPHIGVPGFVAGMEYIHDNY-GSLPMGELLQPAINYAEKGFKVDDSLTMRLDLAKPRIYSDKLSI 159 (323)
T ss_dssp -----CCCCBCCHHHHHHHHHHHH-CCSCHHHHHHHHHHHHHHCEECCHHHHHHHHHHHHHHCCTTCGG
T ss_pred -hcCCCcccCchHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHhcCCccc
Confidence 24779999999999999999999 99999999999999999999999999999999999999888753
No 7
>2nlz_A Cephalosporin acylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.70A {Bacillus halodurans} SCOP: d.153.1.6
Probab=100.00 E-value=5.6e-49 Score=348.23 Aligned_cols=144 Identities=22% Similarity=0.320 Sum_probs=136.6
Q ss_pred CchHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcCCCCCCccCeeeEEEECCCCcEEEEeeeccccccCCcchhcCCc--
Q psy11446 2 KLNVGLSTCRNILRKGGNAVDAAITALLCDGLSCPQSMGLGGGFLMTLYNKTTGKAYAINAREKAPAAATLGMFHGNY-- 79 (150)
Q Consensus 2 ~~~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P~~~giGGg~~~l~~~~~~~~~~~id~~~~aP~~~~~~~~~~~~-- 79 (150)
+|++||++|++||++||||||||||+++||+|||||+||||||+|||||++ + ++++||+||+||+.++.++|.+..
T Consensus 29 ~~plAs~aG~~iL~~GGNAvDAAVA~~~~l~VveP~~sGiGGggf~lv~~~-~-~~~~id~re~AP~~a~~~~~~~~g~~ 106 (547)
T 2nlz_A 29 SQPLAAQAGLDILKAGGNAIDAAIATATALTVLEPTSNGIGSDAFALVWTK-G-KLHGLNGSGRAPMSLTMEAVKAKGYE 106 (547)
T ss_dssp SSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTSCCTBCEEEEEEEET-T-EEEEEEECCCCCTTCCHHHHHTTTCC
T ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCCCCceEEEEEEC-C-ceEEEecccCCcccCCHHHHhhcCCC
Confidence 689999999999999999999999999999999999999999999999997 4 999999999999999999997542
Q ss_pred -cccccCCcccccchHHHHHHHHHHHcCCCCChHHhhHHHHHHhhCCCccCHHHHHHHHHhHHHhhcCCC
Q psy11446 80 -KAAQTGALAAAIPAEVLGYWTVYHRFGGGVPWRDLFEEPIALALNGVNINHHLAKNIRLYEDHIRRSPQ 148 (150)
Q Consensus 80 -~~~~~g~~sv~VPG~~~g~~~~~~~~gG~l~w~~ll~PaI~lA~~Gf~v~~~l~~~l~~~~~~l~~~p~ 148 (150)
.++..|+++|+|||+++||+++|+|| |||||++||+|||+|||+||+|++.+++.|+...+.|+++|+
T Consensus 107 ~~~~~~G~~av~VPG~v~g~~~a~~~~-G~Lpw~~ll~PAI~lA~~Gf~Vs~~la~~~~~~~~~l~~~p~ 175 (547)
T 2nlz_A 107 QELPPYGVIPVTVPGAPGAWAELAKMY-GNLPLAASLAPAIRYAEEGYPVTPTLAKYWKAAYDRVKTEWT 175 (547)
T ss_dssp SSCCSSSSTTCCCCCHHHHHHHHHHHH-CSSCHHHHTHHHHHHHHHCEECCHHHHHHHHHHHHHHHHHCC
T ss_pred ccCCCCCCcccccchHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHcCCccCHHHHHHHHHHHHHHhcCCc
Confidence 46778999999999999999999999 999999999999999999999999999999988888888876
No 8
>1apy_A Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_A*
Probab=95.11 E-value=0.032 Score=42.07 Aligned_cols=42 Identities=24% Similarity=0.283 Sum_probs=31.6
Q ss_pred chHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcC--CCCCCccCe
Q psy11446 3 LNVGLSTCRNILRKGGNAVDAAITALLCDGLSCP--QSMGLGGGF 45 (150)
Q Consensus 3 ~~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P--~~~giGGg~ 45 (150)
...|.++|.++|++||+|.||.+++.-.+=- .| +..|.|+-.
T Consensus 13 ~~~a~~~g~~~L~~G~sAlDAV~~av~~lEd-~p~~fNAG~Gs~~ 56 (162)
T 1apy_A 13 FKNATEAAWRALASGGSALDAVESGCAMCER-EQCDGSVGFGGSP 56 (162)
T ss_dssp CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-HTGGGSSSSSSCC
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHh-CCCCcCcCCCCCC
Confidence 3468999999999999999999988444332 25 667777643
No 9
>1k2x_A Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_A* 1t3m_A 2zal_A
Probab=94.04 E-value=0.08 Score=40.37 Aligned_cols=41 Identities=20% Similarity=0.175 Sum_probs=31.0
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcCCCCCCccC
Q psy11446 4 NVGLSTCRNILRKGGNAVDAAITALLCDGLSCPQSMGLGGG 44 (150)
Q Consensus 4 ~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P~~~giGGg 44 (150)
..|.++|.++|++||+|.||.+++.-++=--.-++.|.|+-
T Consensus 32 ~~a~~~~~~~L~~g~saldAV~~av~~lEd~p~fNaG~Gs~ 72 (177)
T 1k2x_A 32 SAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGAV 72 (177)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCCcCCcC
Confidence 46788999999999999999999866655333356666654
No 10
>2gez_A L-asparaginase alpha subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=93.80 E-value=0.092 Score=40.65 Aligned_cols=41 Identities=12% Similarity=-0.030 Sum_probs=31.1
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcCCCCCCccC
Q psy11446 4 NVGLSTCRNILRKGGNAVDAAITALLCDGLSCPQSMGLGGG 44 (150)
Q Consensus 4 ~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P~~~giGGg 44 (150)
..|.++|.++|++||+|.||.+++.-.|=--.=++.|.|+-
T Consensus 35 ~~a~~~g~~~L~~G~sAlDAV~~av~~lEd~p~fNaG~Gs~ 75 (195)
T 2gez_A 35 RHCLQIGVEALKAQKPPLDVVELVVRELENIEHFNAGIGSV 75 (195)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCCcCCcC
Confidence 46788999999999999999999866655333356666654
No 11
>4gdv_A L-asparaginase; NTN enzyme, homodimer, hydrolase, L-asparagine; 1.75A {Homo sapiens} PDB: 4gdu_A 4gdt_A 4gdw_A
Probab=93.74 E-value=0.079 Score=43.75 Aligned_cols=40 Identities=33% Similarity=0.326 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcC-CCCCCccC
Q psy11446 4 NVGLSTCRNILRKGGNAVDAAITALLCDGLSCP-QSMGLGGG 44 (150)
Q Consensus 4 ~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P-~~~giGGg 44 (150)
..|.++|.++|++||+|.||.+++.-+|== .| +++|.|+-
T Consensus 30 ~~a~~~g~~~L~~ggsalDAV~~av~~lEd-~p~fNaG~Gs~ 70 (310)
T 4gdv_A 30 VRAATVGYGILREGGSAVDAVEGAVVALED-DPEFNAGCGSV 70 (310)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHHHH-STTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHc-CCCCCCccCcC
Confidence 467889999999999999999877666653 45 66677654
No 12
>3c17_A L-asparaginase precursor; isoaspartyl peptidase, NTN-hydrolase, autoprot precursor, hydrolase; 1.95A {Escherichia coli} PDB: 2zak_A
Probab=91.05 E-value=0.31 Score=40.36 Aligned_cols=41 Identities=20% Similarity=0.175 Sum_probs=31.5
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcCCCCCCccC
Q psy11446 4 NVGLSTCRNILRKGGNAVDAAITALLCDGLSCPQSMGLGGG 44 (150)
Q Consensus 4 ~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P~~~giGGg 44 (150)
..|.++|.++|++||+|.||.+++.-.|=--.=++.|.|+-
T Consensus 32 ~~a~~~~~~~L~~ggsalDAV~~av~~lEd~p~fNaG~Gs~ 72 (320)
T 3c17_A 32 SAIVETGQKMLEAGESALDVVTEAVRLLEECPLFNAGIGAV 72 (320)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHSTTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHhhhhhcCCCCCCccCCC
Confidence 46789999999999999999999866655333356676654
No 13
>1p4k_A N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; alpha beta, beta alpha, sandwich, hydrolase; 1.90A {Elizabethkingia meningoseptica} SCOP: d.153.1.5 PDB: 1p4v_A 9gaa_A 9gaf_A 9gac_A 3ljq_A 2gl9_A* 1ayy_A 2gaw_A 2gac_A* 2gaw_B 1ayy_B 2gl9_B* 2gac_B*
Probab=90.88 E-value=0.31 Score=39.94 Aligned_cols=39 Identities=31% Similarity=0.436 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcC--CCCCCccC
Q psy11446 5 VGLSTCRNILRKGGNAVDAAITALLCDGLSCP--QSMGLGGG 44 (150)
Q Consensus 5 ~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P--~~~giGGg 44 (150)
.|.++|.++|++||+|.||.+++.-.|= -.| ++.|.|+-
T Consensus 16 ~a~~~~~~~L~~ggsaldAV~~av~~lE-d~p~~fnaG~Gs~ 56 (295)
T 1p4k_A 16 HANVEAWKVLSKGGKALDAVEKGVRLVE-DDPTERSVGYGGR 56 (295)
T ss_dssp HHHHHHHHHHTTTCCHHHHHHHHHHHHH-HCTTCTTSSTTCC
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHh-hCCCccCcccCCC
Confidence 5789999999999999999998855544 455 66777764
No 14
>2a8j_A Taspase 1, threonine aspartase 1; MLL, glycosylspraginase, asparaginase, hydrolase; 1.90A {Homo sapiens} PDB: 2a8i_A 2a8m_A 2a8l_A
Probab=89.34 E-value=0.49 Score=40.55 Aligned_cols=40 Identities=25% Similarity=0.330 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHcCCCHHHHHHHHHHHhHhhcC-CCCCCccC
Q psy11446 4 NVGLSTCRNILRKGGNAVDAAITALLCDGLSCP-QSMGLGGG 44 (150)
Q Consensus 4 ~~as~aG~~iL~~GGNAvDAAvA~~~~l~Vv~P-~~~giGGg 44 (150)
..|.++|.++|++||+|.||.+++.-.|= -.| +++|.|+-
T Consensus 66 ~~A~~~a~~~L~~GgsAlDAV~~av~~lE-d~p~fNaG~Gs~ 106 (420)
T 2a8j_A 66 KRACQKAIEKLQAGALATDAVTAALVELE-DSPFTNAGMGSN 106 (420)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHH-HSTTSSSSTTCC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHh-cCCCCCccCCcC
Confidence 45788999999999999999998755544 356 46777654
No 15
>3gxq_A Putative regulator of transfer genes ARTA; ribbon-helix-helix, plasmid, DNA binding protein/DNA complex; HET: DNA; 2.35A {Staphylococcus aureus subsp}
Probab=56.43 E-value=4 Score=24.35 Aligned_cols=15 Identities=33% Similarity=0.479 Sum_probs=12.3
Q ss_pred chHHHHHHHHHHHcC
Q psy11446 3 LNVGLSTCRNILRKG 17 (150)
Q Consensus 3 ~~~as~aG~~iL~~G 17 (150)
-...|++|++||++|
T Consensus 35 fdnvsqagreilkkg 49 (54)
T 3gxq_A 35 FDNVSQAGREILKKG 49 (54)
T ss_dssp TTCHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHH
Confidence 345789999999986
No 16
>1x58_A Hypothetical protein 4930532D21RIK; MUS musculus adult MALE testis cDNA, riken FULL-length enriched library, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.4.1.1
Probab=39.74 E-value=24 Score=22.21 Aligned_cols=24 Identities=17% Similarity=0.295 Sum_probs=20.5
Q ss_pred cchHHHHHHHHHHHcCCCCChHHhhH
Q psy11446 91 IPAEVLGYWTVYHRFGGGVPWRDLFE 116 (150)
Q Consensus 91 VPG~~~g~~~~~~~~gG~l~w~~ll~ 116 (150)
.+=+...|.+..++| |+ .|.+|+.
T Consensus 12 T~EE~~~L~~gV~k~-G~-~W~~I~~ 35 (62)
T 1x58_A 12 TKEEVNYLFHGVKTM-GN-HWNSILW 35 (62)
T ss_dssp CHHHHHHHHHHHHHH-CS-CHHHHHH
T ss_pred CHHHHHHHHHHHHHH-hH-hHHHHHH
Confidence 355778899999999 99 9999984
No 17
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=38.31 E-value=47 Score=27.19 Aligned_cols=84 Identities=13% Similarity=0.098 Sum_probs=55.6
Q ss_pred CCCHHHHHHHHHHHh---------------------HhhcCCCCCCcc--CeeeEEEECCCCcEEEEeeeccccccCCcc
Q psy11446 17 GGNAVDAAITALLCD---------------------GLSCPQSMGLGG--GFLMTLYNKTTGKAYAINAREKAPAAATLG 73 (150)
Q Consensus 17 GGNAvDAAvA~~~~l---------------------~Vv~P~~~giGG--g~~~l~~~~~~~~~~~id~~~~aP~~~~~~ 73 (150)
||.++|.|=++++.+ -+.-|...|-|. ..+.++++.+++.-..+......|..+-.|
T Consensus 97 GGsv~D~aK~ia~~~~~~~~~~d~~~~~~~~~~~~p~i~IPTTagtgSe~t~~avi~~~~~~~K~~i~~~~~~P~~~i~D 176 (383)
T 3ox4_A 97 GGSPHDCAKAIALVATNGGEVKDYEGIDKSKKPALPLMSINTTAGTASEMTRFCIITDEVRHVKMAIVDRHVTPMVSVND 176 (383)
T ss_dssp SHHHHHHHHHHHHHHHSCSSGGGGCEESCCSSCCSCEEEEECSSSCCTTTCSEEEEEETTTTEEEEEECGGGSCSEEEEC
T ss_pred CcHHHHHHHHHHHHHhCCCCHHHHhcccccccCCCCEEEEeCCCCchhhcCCeEEEEECCCCeEEeecCCCccceEEEEC
Confidence 899999998888877 255677766554 346778888655555666555566543222
Q ss_pred hhcCCccccccCCcccccchHHHHHHHHHHHc
Q psy11446 74 MFHGNYKAAQTGALAAAIPAEVLGYWTVYHRF 105 (150)
Q Consensus 74 ~~~~~~~~~~~g~~sv~VPG~~~g~~~~~~~~ 105 (150)
+.....-|..++.-|.++.+..+.|.|
T Consensus 177 -----p~l~~tlP~~~~aag~~Dal~ha~Eay 203 (383)
T 3ox4_A 177 -----PLLMVGMPKGLTAATGMDALTHAFEAY 203 (383)
T ss_dssp -----GGGTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred -----cHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 112223345677778888888888877
Done!