Query psy1145
Match_columns 138
No_of_seqs 105 out of 1108
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 18:47:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1145.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1145hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r99_A Peptidyl-prolyl CIS-tra 100.0 5.1E-46 1.7E-50 271.2 15.7 128 2-137 41-173 (173)
2 2cmt_A Peptidyl-prolyl CIS-tra 100.0 6.4E-46 2.2E-50 270.4 15.5 128 2-137 40-172 (172)
3 2z6w_A Peptidyl-prolyl CIS-tra 100.0 7.8E-46 2.7E-50 268.5 15.5 128 2-137 33-165 (165)
4 3pmp_A Cyclophilin A; peptidyl 100.0 1.9E-45 6.6E-50 266.2 15.6 128 2-137 32-164 (164)
5 2igv_A Peptidyl-prolyl CIS-tra 100.0 1.9E-45 6.3E-50 268.3 15.1 128 2-137 33-172 (173)
6 2haq_A Cyclophilin; rotamase, 100.0 1.8E-45 6E-50 268.0 13.8 127 2-136 41-172 (172)
7 3rdd_A Peptidyl-prolyl CIS-tra 100.0 3.9E-45 1.3E-49 268.8 14.6 128 2-137 52-184 (184)
8 2poy_A Peptidyl-prolyl CIS-tra 100.0 7.2E-45 2.5E-49 267.7 14.3 126 2-135 49-186 (186)
9 1qng_A Peptidyl-prolyl CIS-tra 100.0 1.2E-44 4.2E-49 263.3 14.7 126 2-136 33-170 (170)
10 1a58_A Cyclophilin; isomerase, 100.0 2.1E-44 7.3E-49 263.6 15.6 128 2-137 36-177 (177)
11 2wfi_A Peptidyl-prolyl CIS-tra 100.0 2E-44 6.9E-49 264.1 15.4 127 2-136 39-179 (179)
12 3ich_A Peptidyl-prolyl CIS-tra 100.0 2.1E-44 7.1E-49 265.7 14.5 128 2-137 45-178 (188)
13 2he9_A NK-tumor recognition pr 100.0 3.5E-44 1.2E-48 265.2 15.5 129 2-138 49-191 (192)
14 3k2c_A Peptidyl-prolyl CIS-tra 100.0 5.3E-44 1.8E-48 264.5 15.4 128 2-137 57-191 (193)
15 4fru_A Cyclophilin B, peptidyl 100.0 3.9E-44 1.3E-48 263.8 14.6 128 2-137 42-175 (185)
16 1mzw_A Cyclophilin H, U-snRNP- 100.0 3.4E-44 1.2E-48 262.5 13.1 127 2-136 40-177 (177)
17 2c3b_A Ppiase, cyclophilin; is 100.0 7.9E-45 2.7E-49 264.7 9.0 127 2-136 37-172 (172)
18 1z81_A Cyclophilin; structural 100.0 7.6E-43 2.6E-47 263.7 12.2 127 2-136 89-229 (229)
19 2poe_A Cyclophilin-like protei 100.0 2E-41 6.8E-46 249.2 13.5 128 2-137 41-175 (185)
20 2x7k_A Peptidyl-prolyl CIS-tra 100.0 2.4E-41 8.4E-46 245.1 12.6 124 2-137 36-166 (166)
21 2ok3_A Peptidyl-prolyl CIS-tra 100.0 5.2E-41 1.8E-45 242.3 13.4 124 2-137 25-156 (161)
22 1zkc_A Peptidyl-prolyl CIS-tra 100.0 6.9E-41 2.4E-45 248.2 14.3 124 2-137 44-175 (197)
23 2ose_A Probable peptidyl-proly 100.0 4.7E-41 1.6E-45 255.0 13.0 127 2-137 44-207 (234)
24 2fu0_A Cyclophilin, putative; 100.0 8.4E-41 2.9E-45 240.9 12.9 123 2-136 30-159 (160)
25 2b71_A Cyclophilin-like protei 100.0 8.8E-41 3E-45 247.5 13.2 124 2-137 63-193 (196)
26 2k7n_A Peptidyl-prolyl CIS-tra 100.0 1.3E-40 4.5E-45 247.6 12.5 125 2-138 36-167 (203)
27 3bo7_A Peptidyl-prolyl CIS-tra 100.0 2.6E-40 9E-45 246.1 13.1 124 2-137 31-173 (201)
28 2a2n_A Peptidylprolyl isomeras 100.0 3.6E-40 1.2E-44 240.8 13.1 122 2-135 46-175 (176)
29 1w74_A Peptidyl-prolyl CIS-tra 100.0 7E-40 2.4E-44 241.9 13.2 123 2-136 48-191 (191)
30 1ihg_A Cyclophilin 40; ppiase 100.0 7.4E-40 2.5E-44 261.3 14.3 129 1-137 44-185 (370)
31 1lop_A Cyclophilin A; rotamase 100.0 1.2E-39 4.2E-44 235.8 9.4 123 2-137 24-164 (164)
32 2hq6_A Serologically defined c 100.0 3.3E-38 1.1E-42 232.0 11.6 123 2-137 49-180 (185)
33 1v9t_A Cyclophilin B; beta bar 100.0 4.9E-38 1.7E-42 227.7 10.6 123 2-137 29-166 (166)
34 3s6m_A Peptidyl-prolyl CIS-tra 100.0 1.4E-37 4.7E-42 225.6 10.4 122 2-136 28-167 (167)
35 3bkp_A Cyclophilin; malaria, i 100.0 1.6E-37 5.4E-42 235.3 10.4 128 2-137 46-193 (232)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 8.1E-32 2.8E-36 215.0 2.4 115 2-132 203-355 (369)
37 3q6c_A Probable receptor YHHM; 46.4 10 0.00036 23.6 1.8 25 4-29 56-81 (83)
38 2k9u_B Filamin-binding LIM pro 39.9 28 0.00094 16.6 2.3 12 82-93 8-19 (26)
39 3kop_A Uncharacterized protein 32.2 31 0.0011 24.6 2.7 17 99-115 150-166 (188)
40 3rd4_A Uncharacterized protein 26.9 28 0.00095 22.4 1.5 25 4-29 60-85 (100)
41 2dyq_A Amyloid beta A4 precurs 26.0 74 0.0025 21.6 3.7 37 82-118 2-45 (144)
42 2l0c_A Putative membrane prote 23.0 45 0.0015 21.2 2.0 25 4-29 59-84 (97)
43 1zx8_A Hypothetical protein TM 21.7 22 0.00074 24.1 0.2 17 98-114 107-123 (136)
No 1
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=5.1e-46 Score=271.25 Aligned_cols=128 Identities=23% Similarity=0.450 Sum_probs=120.1
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeeccccCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRRIKKTSEN 79 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~~~~~~~~ 79 (138)
|+||++||+|+ ++++|+++.||||+|+|+||+||++.+++.++.++|+.+| ++|++.++| +|+||||+.++
T Consensus 41 ~~NF~~L~~g~-~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f--~dE~~~l~h~~~G~lsmA~~gp---- 113 (173)
T 2r99_A 41 AENFRCLCTHE-KGFGFKGSSFHRIIPQFMCQGGDFTNHNGTGGKSIYGKKF--DDENFILKHTGPGLLSMANSGP---- 113 (173)
T ss_dssp HHHHHHHHHTT-TSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCB--CCCCCCSCCCSSSEEEECCSST----
T ss_pred HHHHHHHhccc-CCceecCCEEEEeeCCCEEEeCCcCCCCCCCCCccCCCcc--cCcccCcccCCCcEEEEccCCC----
Confidence 79999999988 8888999999999999999999998889999999999887 899887777 79999999876
Q ss_pred CCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCCCCcccceEEeeeeEec
Q psy1145 80 KGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQGQPTERFYISNCGKWE 137 (138)
Q Consensus 80 ~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~~~P~~~v~I~~cg~l~ 137 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++.+++|.++|+|.+||+|.
T Consensus 114 -~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~cG~l~ 173 (173)
T 2r99_A 114 -NTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIIADCGEYV 173 (173)
T ss_dssp -TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEEEEECC
T ss_pred -CCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCCeEEEEeeeEC
Confidence 8999999999985 99999999999999999999999999889999999999999984
No 2
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=6.4e-46 Score=270.45 Aligned_cols=128 Identities=28% Similarity=0.455 Sum_probs=120.0
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeeccccCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRRIKKTSEN 79 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~~~~~~~~ 79 (138)
|+||++||+++ ++++|+++.||||+|+|+||+||++.+++.++.++|+.+| ++|++.++| +|+||||+.++
T Consensus 40 ~~NF~~L~~~~-~g~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f--~dE~~~l~h~~~G~lsmA~~gp---- 112 (172)
T 2cmt_A 40 AENFRALCTGE-RGFGYHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKF--DDENFQLRHEGFGVLSMANSGP---- 112 (172)
T ss_dssp HHHHHHHHHTT-TSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCB--CCCCCCSCCCSTTEEEECCSST----
T ss_pred HHHHHHHhccC-CCceECCCEEEEEECCCEEEcCCccCCCCCCCCccCCCcc--cccccCcccCCceEEEEeeCCC----
Confidence 79999999987 7888999999999999999999998889999999999887 899888877 69999999876
Q ss_pred CCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCCCCcccceEEeeeeEec
Q psy1145 80 KGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQGQPTERFYISNCGKWE 137 (138)
Q Consensus 80 ~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~~~P~~~v~I~~cg~l~ 137 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++.+++|.++|+|.+||+|+
T Consensus 113 -~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~~g~l~ 172 (172)
T 2cmt_A 113 -NTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPVIISRCGELI 172 (172)
T ss_dssp -TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCCCSSCEEEEEEEEEC
T ss_pred -CCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCCEEEEEeEeEC
Confidence 8999999999985 99999999999999999999999999899999999999999985
No 3
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=7.8e-46 Score=268.48 Aligned_cols=128 Identities=26% Similarity=0.486 Sum_probs=120.4
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeeccccCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRRIKKTSEN 79 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~~~~~~~~ 79 (138)
|+||++||+|+ ++++|+++.||||+|+|+||+||++.+++.++.++|+.++ ++|++.++| +|+||||+.++
T Consensus 33 ~~NF~~L~~g~-~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f--~dE~~~l~h~~~G~lsmA~~gp---- 105 (165)
T 2z6w_A 33 AENFRALCTGE-KGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRF--PDENFTLKHVGPGVLSMANAGP---- 105 (165)
T ss_dssp HHHHHHHHHTT-TSCCSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCB--CCCCCCSCCCSTTEEEECCSST----
T ss_pred HHHHHHHhccC-CCccCcCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcc--cCcccccccCCCCEEEEeeCCC----
Confidence 79999999998 8888999999999999999999998889999999999887 999888887 59999999876
Q ss_pred CCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCCCCcccceEEeeeeEec
Q psy1145 80 KGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQGQPTERFYISNCGKWE 137 (138)
Q Consensus 80 ~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~~~P~~~v~I~~cg~l~ 137 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++.+++|.++|+|.+||+|+
T Consensus 106 -~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P~~~v~I~~~g~l~ 165 (165)
T 2z6w_A 106 -NTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKIVITDCGQLS 165 (165)
T ss_dssp -TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSSCEEEEEEEECC
T ss_pred -CCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCcEEEEEeEEEC
Confidence 8999999999985 99999999999999999999999999899999999999999984
No 4
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=1.9e-45 Score=266.21 Aligned_cols=128 Identities=25% Similarity=0.428 Sum_probs=120.3
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeeccccCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRRIKKTSEN 79 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~~~~~~~~ 79 (138)
|+||++||+|+ ++++|+++.||||+|+|+||+||++.+++.++.++|++++ ++|++.++| +|+||||+.++
T Consensus 32 ~~nF~~L~~g~-~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~~--~dE~~~l~h~~~G~lsma~~g~---- 104 (164)
T 3pmp_A 32 AKNFRELATGQ-HGFGYKDSIFHRVIPQFMLQGGDFTRHNGTGGKSIYGEKF--ADENFQVKHTKPGLLSMANAGA---- 104 (164)
T ss_dssp HHHHHHHHHTT-TSCSSTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCB--CCCCCCSCCCSTTEEEECBSST----
T ss_pred HHHHHHHhccc-CCCcccCCEEEEEECCCeEEeCCCCCCCCCCCcccCCccc--cccccccCcCCCcEEEEeeCCC----
Confidence 79999999998 8888999999999999999999998899999999999987 899888877 69999999876
Q ss_pred CCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCCCCcccceEEeeeeEec
Q psy1145 80 KGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQGQPTERFYISNCGKWE 137 (138)
Q Consensus 80 ~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~~~P~~~v~I~~cg~l~ 137 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++.+++|.++|+|.+||+|+
T Consensus 105 -~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P~~~v~I~~cg~l~ 164 (164)
T 3pmp_A 105 -NTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKTNATIKITDCGTVA 164 (164)
T ss_dssp -TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEEEEEC-
T ss_pred -CCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCcccCEEEEeCeEEC
Confidence 8999999999985 99999999999999999999999999999999999999999984
No 5
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=1.9e-45 Score=268.31 Aligned_cols=128 Identities=27% Similarity=0.507 Sum_probs=119.2
Q ss_pred hhhhHHHhcCCCCCe-------eecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeec
Q psy1145 2 ATNFELLTIGEFPGL-------SYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRR 72 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~-------~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~ 72 (138)
|+||++||+++ +++ .|+++.||||+|+|+||+||++.+++.++.++|+.+| +||++.++| +|+||||+
T Consensus 33 ~~NF~~L~~~~-~g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~siyg~~f--~dE~~~l~h~~~G~lsmAn 109 (173)
T 2igv_A 33 AGNFRALCTGE-NGIGKSGKPLHFKGSKFHRIIPNFMIQGGDFTRGNGTGGESIYGEKF--PDENFKEKHTGPGVLSMAN 109 (173)
T ss_dssp HHHHHHHHHTT-TCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCB--CCCCCCSCCCSTTEEEECC
T ss_pred HHHHHHHhcCC-CCCCccCccceECCCEEEEEECCCEEEcCCCCCCCCCCCCccCCCcc--cCcccccCCCCCeEEEEee
Confidence 79999999986 664 3999999999999999999998889999999999887 999888887 69999999
Q ss_pred cccCCCCCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCCCCcccceEEeeeeEec
Q psy1145 73 IKKTSENKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQGQPTERFYISNCGKWE 137 (138)
Q Consensus 73 ~~~~~~~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~~~P~~~v~I~~cg~l~ 137 (138)
.++ ++++||||||+.+ ||++|+|||||++|||||++|+++++.+++|.++|+|.+||+|+
T Consensus 110 ~gp-----~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~v~I~~~g~l~ 172 (173)
T 2igv_A 110 AGP-----NTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDCMIADCGQLK 172 (173)
T ss_dssp SST-----TCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSCEEEEEEEEEC
T ss_pred CCC-----CCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCCEEEEEeEEEc
Confidence 876 8999999999985 99999999999999999999999999889999999999999986
No 6
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.8e-45 Score=268.02 Aligned_cols=127 Identities=26% Similarity=0.385 Sum_probs=118.5
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC-cceeeeeccccCCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR-RGAVGMRRIKKTSENK 80 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h-~G~lsm~~~~~~~~~~ 80 (138)
|+||++||+|+ ++++|+++.||||+|+|+||+||++.+++.++.|+||.++ ++|++.++| +|+||||+.++
T Consensus 41 ~~NF~~L~~g~-~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f--~dE~~~l~h~~G~lsmAn~gp----- 112 (172)
T 2haq_A 41 TENFRQLCTGE-HGFGYKDSIFHRVIQNFMIQGGDFTNFDGTGGKSIYGEKF--ADENLNVKHFVGALSMANAGP----- 112 (172)
T ss_dssp HHHHHHHHHTT-TSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCCSSSSCB--CCCCCCSCCCTTEEEECCSST-----
T ss_pred HHHHHHHhccC-CCcccCCCEEEEEECCCEEecCCccCCCCCCCccccCCcc--cCcCCCcccCceEEEEccCCC-----
Confidence 79999999988 8888999999999999999999998889999999999887 899888888 89999999876
Q ss_pred CcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCC-CCcccceEEeeeeEe
Q psy1145 81 GLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQ-GQPTERFYISNCGKW 136 (138)
Q Consensus 81 ~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~-~~P~~~v~I~~cg~l 136 (138)
++++||||||+.+ ||++|+|||||++|||||++|+++++.+ ++|.++|+|.+||+|
T Consensus 113 ~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l 172 (172)
T 2haq_A 113 NTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPVKIVASGEL 172 (172)
T ss_dssp TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred CCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCeEEEEeEEC
Confidence 8999999999985 9999999999999999999999999854 599999999999986
No 7
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=3.9e-45 Score=268.84 Aligned_cols=128 Identities=25% Similarity=0.474 Sum_probs=120.6
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeeccccCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRRIKKTSEN 79 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~~~~~~~~ 79 (138)
|+||++||+++ ++++|+++.||||+|+|+||+||++.+++.++.++|++.+ ++|++.++| +|+||||+.++
T Consensus 52 ~~NF~~L~~~~-~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~~--~de~~~l~h~~~G~lsmA~~gp---- 124 (184)
T 3rdd_A 52 AENFRALSTGE-KGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKF--EDENFILKHTGPGILSMANAGP---- 124 (184)
T ss_dssp HHHHHHHHHTT-TSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCB--CCCCCCSCCCSTTEEEECCSST----
T ss_pred HHHHHHHhccC-cCcccCCCEEEEccCCcEEEeCCCCCCCCCCCcccCCCcc--cCcccccccCCCcEEEEEeCCC----
Confidence 79999999988 8888999999999999999999998899999999999887 899888777 79999999876
Q ss_pred CCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCCCCcccceEEeeeeEec
Q psy1145 80 KGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQGQPTERFYISNCGKWE 137 (138)
Q Consensus 80 ~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~~~P~~~v~I~~cg~l~ 137 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++.+++|.++|+|.+||+|+
T Consensus 125 -~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~P~~~v~I~~cG~l~ 184 (184)
T 3rdd_A 125 -NTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQLE 184 (184)
T ss_dssp -TCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSCEEEEEEEECC
T ss_pred -CCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCCCCcCCeEEEeCeEEC
Confidence 8999999999986 99999999999999999999999999999999999999999985
No 8
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=7.2e-45 Score=267.69 Aligned_cols=126 Identities=28% Similarity=0.426 Sum_probs=116.9
Q ss_pred hhhhHHHhcCCCCCee-------ecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeec
Q psy1145 2 ATNFELLTIGEFPGLS-------YRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRR 72 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~-------Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~ 72 (138)
|+||++||+|+ ++++ |+++.||||+|+|+||+||++.+++.++.|+|+++| +||++.++| +|+||||+
T Consensus 49 ~~NF~~L~~g~-~g~~~~~~~~~Y~g~~FhRVi~~f~iQgGd~~~~~G~gg~si~g~~f--~dE~~~l~h~~~G~lsMAn 125 (186)
T 2poy_A 49 AENFRALCTGE-KGMGQSGKPLCYTGSFFHRIIPQFMIQGGDFTRGDGTGGESIYGSKF--RDENFVYTHDAPFLLSMAN 125 (186)
T ss_dssp HHHHHHHHHTT-TCBCTTSSBSCCTTCBCCEEETTTEEEECCTTTSSSSCCCCTTC-CB--CCCCCCSCCCSTTEEEECC
T ss_pred HHHHHHHhccc-CCccccCccceECCCEEEEEeCCCEEEeCCCCCCCCCCCCccCCCcc--cCcccccccCCCcEEEEee
Confidence 79999999987 7764 999999999999999999998889999999999887 999888887 69999999
Q ss_pred cccCCCCCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCCCCcccceEEeeeeE
Q psy1145 73 IKKTSENKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQGQPTERFYISNCGK 135 (138)
Q Consensus 73 ~~~~~~~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~~~P~~~v~I~~cg~ 135 (138)
.++ ++++||||||+.+ ||++|+|||||++|||||++|+++++.+++|.++|+|.+||+
T Consensus 126 ~gp-----ntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~P~~~v~I~~cG~ 186 (186)
T 2poy_A 126 AGP-----NTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNGKPTKSVCITASGV 186 (186)
T ss_dssp SST-----TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSSCEEEEEEEC
T ss_pred CCC-----CCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCCEEEEeCCC
Confidence 876 8999999999985 999999999999999999999999998999999999999995
No 9
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=1.2e-44 Score=263.33 Aligned_cols=126 Identities=23% Similarity=0.378 Sum_probs=116.3
Q ss_pred hhhhHHHhcCCCCCe-------eecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeec
Q psy1145 2 ATNFELLTIGEFPGL-------SYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRR 72 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~-------~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~ 72 (138)
|+||++||+++ ++ +|+++.||||+|+|+||+||++.+++.++.|+|+.+| ++|++.++| +|+||||+
T Consensus 33 ~~NF~~L~~~~--g~g~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f--~dE~~~l~h~~~G~lsmAn 108 (170)
T 1qng_A 33 CENFRALCTGE--KIGSRGKNLHYKNSIFHRIIPQFMCQGGDITNGNGSGGESIYGRSF--TDENFNMKHDQPGLLSMAN 108 (170)
T ss_dssp HHHHHHHHHTC--EECTTSSEECCTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCB--CCCCCCSCCCSTTEEEECC
T ss_pred HHHHHHHhccC--CcCccCccceECCCEEEEEECCCEEEcCCccCCCCCCCccccCCcc--cccccccccCCCCEEEEee
Confidence 79999999863 33 3999999999999999999998889999999999887 999888877 69999998
Q ss_pred cccCCCCCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCCCCcccceEEeeeeEe
Q psy1145 73 IKKTSENKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQGQPTERFYISNCGKW 136 (138)
Q Consensus 73 ~~~~~~~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~~~P~~~v~I~~cg~l 136 (138)
.++ ++++||||||+.+ ||++|+|||||++|||||++|+++++.+++|.++|+|.+||+|
T Consensus 109 ~gp-----~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~v~I~~cG~l 170 (170)
T 1qng_A 109 AGP-----NTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVKRSVVITDCGEL 170 (170)
T ss_dssp SST-----TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCEEEEEEEEC
T ss_pred cCC-----CCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCCCCeEEEeceeC
Confidence 876 8999999999985 9999999999999999999999999988999999999999986
No 10
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=2.1e-44 Score=263.55 Aligned_cols=128 Identities=27% Similarity=0.423 Sum_probs=116.5
Q ss_pred hhhhHHHhcCCCCC--------eeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeee
Q psy1145 2 ATNFELLTIGEFPG--------LSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMR 71 (138)
Q Consensus 2 ~~NF~~L~~g~~~g--------~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~ 71 (138)
|+||++||+++ ++ +.|+++.||||+|+|+||+||++.+++.++.++|+.+| +||++.++| +|+||||
T Consensus 36 ~~NF~~L~~~~-~g~~~~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f--~dE~~~~~h~~~G~lsmA 112 (177)
T 1a58_A 36 CNNFLMLCTGM-AGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMF--DDEEFVMKHDEPFVVSMA 112 (177)
T ss_dssp HHHHHHHHHCT-TCBCTTTCSBCCCTTCBEEEEETTTEEEECCCSSSSSSCCCCTTSSCB--CCCCCCSCCCSSSEEEEC
T ss_pred HHHHHHHhcCC-cCcccccCCcceeCCCEEEEEECCCEEEeCCccCCCCCCCCcccCCcc--cCcccCcccCCCeEEEEe
Confidence 79999999975 43 14999999999999999999998889999999999887 899887777 7999999
Q ss_pred ccccCCCCCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCC-CCCCcccceEEeeeeEec
Q psy1145 72 RIKKTSENKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSN-AQGQPTERFYISNCGKWE 137 (138)
Q Consensus 72 ~~~~~~~~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~-~~~~P~~~v~I~~cg~l~ 137 (138)
|.++ ++++||||||+.+ ||++|+|||||++|||||++|+++++ .+++|.++|+|.+||+|.
T Consensus 113 n~gp-----~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~~G~l~ 177 (177)
T 1a58_A 113 NKGP-----NTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGELV 177 (177)
T ss_dssp CSST-----TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEC
T ss_pred eCCC-----CCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCCCCeEEEEeEEEC
Confidence 9876 8999999999985 99999999999999999999999997 458999999999999983
No 11
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=2e-44 Score=264.06 Aligned_cols=127 Identities=28% Similarity=0.415 Sum_probs=116.3
Q ss_pred hhhhHHHhcCCCCCe--------eecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeee
Q psy1145 2 ATNFELLTIGEFPGL--------SYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMR 71 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~--------~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~ 71 (138)
|+||++||+|+ ++. .|+++.||||+|+|+||+||++.+++.++.|+|+..+ ++|++.++| +|+||||
T Consensus 39 ~~NF~~L~~g~-~g~~~~~~~~~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f--~dE~~~~~h~~~G~lsMA 115 (179)
T 2wfi_A 39 CENFRCLCTGE-KGTGKSTQKPLHYKSCLFHRVVKDFMVQGGDFSEGNGRGGESIYGGFF--EDESFAVKHNKEFLLSMA 115 (179)
T ss_dssp HHHHHHHHHCT-TCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCB--CCCCCCSCCCSTTEEEEC
T ss_pred HHHHHHHhcCC-cCcccccccCCeECCCEEEEEECCCEEEcccccCCCCCCCCcccCCcc--cccccCcCcCCCeEEEEE
Confidence 79999999876 432 3999999999999999999998889999999999887 999887777 7999999
Q ss_pred ccccCCCCCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCC-CCCCcccceEEeeeeEe
Q psy1145 72 RIKKTSENKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSN-AQGQPTERFYISNCGKW 136 (138)
Q Consensus 72 ~~~~~~~~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~-~~~~P~~~v~I~~cg~l 136 (138)
|.++ ++++||||||+.+ ||++|+|||||++|||||++|+++++ .+++|.++|+|.+||+|
T Consensus 116 n~gp-----~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~G~l 179 (179)
T 2wfi_A 116 NRGK-----DTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEVRILSCGEL 179 (179)
T ss_dssp CSST-----TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCBSSCEEEEEEEEC
T ss_pred eCCC-----CCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCCCCCeEEEeCeeC
Confidence 9876 8999999999985 99999999999999999999999987 56899999999999986
No 12
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=2.1e-44 Score=265.71 Aligned_cols=128 Identities=30% Similarity=0.502 Sum_probs=118.5
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeeccccCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRRIKKTSEN 79 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~~~~~~~~ 79 (138)
|+||++||+|+ ++++|+++.||||+|+||||+||++.+++.|+.|+||..+ ++|++.++| +|+|||||.++
T Consensus 45 ~~NF~~L~~g~-~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f--~dE~~~l~h~~~G~lsmAn~gp---- 117 (188)
T 3ich_A 45 VDNFVALATGE-KGFGYKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERF--PDENFKLKHYGPGWVSMANAGK---- 117 (188)
T ss_dssp HHHHHHHHHTT-TSCSSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCB--CCCCCCSCCCSTTEEEECCSST----
T ss_pred HHHHHHHhccc-CCccccCCEEEEEECCCEEEcCCccCCCCCCCccccCCcc--cccccCcccCCCeEEEEccCCC----
Confidence 79999999988 8888999999999999999999998899999999999887 899887776 79999999876
Q ss_pred CCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCC-CCCcccceEEeeeeEec
Q psy1145 80 KGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNA-QGQPTERFYISNCGKWE 137 (138)
Q Consensus 80 ~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~-~~~P~~~v~I~~cg~l~ 137 (138)
++++||||||+.+ ||++|+|||||++|||||++|+++++. +++|.++|+|.+||+++
T Consensus 118 -~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v~I~~~~~l~ 178 (188)
T 3ich_A 118 -DTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDVIIADCGKIE 178 (188)
T ss_dssp -TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEE
T ss_pred -CCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCEEEEEeEEEe
Confidence 8999999999985 999999999999999999999999984 45999999999999983
No 13
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-44 Score=265.22 Aligned_cols=129 Identities=27% Similarity=0.397 Sum_probs=117.2
Q ss_pred hhhhHHHhcCCCCCe--------eecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeee
Q psy1145 2 ATNFELLTIGEFPGL--------SYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMR 71 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~--------~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~ 71 (138)
|+||++||+|+ +++ .|+++.||||+|+|+||+||++.+++.++.++||.+| +||++.++| +|+||||
T Consensus 49 ~~NF~~L~~g~-~g~~~~~~k~~~Y~g~~FhRVi~~fmiQgGd~~~~~G~gg~siyg~~f--~dE~~~l~h~~~G~lsMA 125 (192)
T 2he9_A 49 CKNFLCLCSGE-KGLGKTTGKKLCYKGSTFHRVVKNFMIQGGDFSEGNGKGGESIYGGYF--KDENFILKHDRAFLLSMA 125 (192)
T ss_dssp HHHHHHHHHCT-TCBCTTTCSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCB--CCCCCCSCCCSTTEEEEC
T ss_pred HHHHHHHhcCC-CCcccccccCCeECCCEEEEEECCCEEEcCcccCCCCCCCCcccCCcc--cCccccCCCCCCeEEEEE
Confidence 89999999876 432 3999999999999999999998889999999999887 999888777 6999999
Q ss_pred ccccCCCCCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCC-CCCCcccceEEeeeeEecC
Q psy1145 72 RIKKTSENKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSN-AQGQPTERFYISNCGKWEG 138 (138)
Q Consensus 72 ~~~~~~~~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~-~~~~P~~~v~I~~cg~l~~ 138 (138)
|.++ ++++||||||+.+ ||++|+|||||++|||||++|+++++ .+++|.++|+|.+||+|..
T Consensus 126 n~gp-----~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~g~l~~ 191 (192)
T 2he9_A 126 NRGK-----HTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADVRVIDCGVLAT 191 (192)
T ss_dssp CSST-----TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEECC-
T ss_pred eCCC-----CCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCCCcCCeEEEEeEEEcc
Confidence 9876 8999999999985 99999999999999999999999987 5689999999999999863
No 14
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=5.3e-44 Score=264.49 Aligned_cols=128 Identities=27% Similarity=0.443 Sum_probs=120.5
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeeccccCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRRIKKTSEN 79 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~~~~~~~~ 79 (138)
|+||++||+|+ ++++|+++.||||+|+|+||+||++.+++.++.++|+..+ ++|++.++| +|+||||+.++
T Consensus 57 v~NF~~L~~g~-~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f--~dE~~~l~h~~~G~lsmAn~gp---- 129 (193)
T 3k2c_A 57 AKNFRTLCERP-KGEGYKGSTFHRIIPGFMVQGGDYTAHNGTGGRSIYGEKF--PDENFELKHTKEGILSMANCGA---- 129 (193)
T ss_dssp HHHHHHHHHSC-TTSSSTTCBEEEEETTTEEEECCTTTSSSSCCCCTTSSCB--CCCCCCSCCCSTTEEEECCSST----
T ss_pred HHHHHHHhccc-cCCcccCCEEEEEeCCCEEEeCCCCCCCCcCCcccCCCcc--cccccccccCCCcEEEEEeCCC----
Confidence 79999999988 7888999999999999999999999899999999999887 899887777 79999999876
Q ss_pred CCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCCCCcc--cceEEeeeeEec
Q psy1145 80 KGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQGQPT--ERFYISNCGKWE 137 (138)
Q Consensus 80 ~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~~~P~--~~v~I~~cg~l~ 137 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++.+++|. ++|+|.+||+|.
T Consensus 130 -~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~g~P~~~~~v~I~~cG~l~ 191 (193)
T 3k2c_A 130 -HTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKKGYRIEIRDCGVLG 191 (193)
T ss_dssp -TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCCTTCCEEEEEEEECC
T ss_pred -CCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCCCcCccCccEEEEEceEeC
Confidence 8999999999985 99999999999999999999999999899999 999999999986
No 15
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=3.9e-44 Score=263.78 Aligned_cols=128 Identities=30% Similarity=0.499 Sum_probs=118.9
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeeccccCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRRIKKTSEN 79 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~~~~~~~~ 79 (138)
|+||++||+++ +|++|+++.||||+|+|+||+||++.+++.++.++|++.+ ++|++.++| +|+||||+.++
T Consensus 42 ~~NF~~L~~~~-~g~~Y~g~~FhRvi~~f~iQgGd~~~~~g~gg~si~g~~f--~de~~~~~h~~~G~lsma~~gp---- 114 (185)
T 4fru_A 42 VDNFVALATGE-KGFGYKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERF--PDENFKLKHYGPGWVSMANAGK---- 114 (185)
T ss_dssp HHHHHHHHHTT-TSCCSTTCBCCEEETTTEEEECCTTTSSSSCCCBTTBSCB--CCCCCCSCCCSTTEEEECCSST----
T ss_pred HHHHHHHHhcC-CCCeEcCCEEEEeeCCCeEEECCCCCCCCCCCccccCCcc--CccccccCcCCCeEEEEeeCCC----
Confidence 79999999987 7856999999999999999999999899999999999987 999888777 79999999876
Q ss_pred CCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCC-CCCCcccceEEeeeeEec
Q psy1145 80 KGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSN-AQGQPTERFYISNCGKWE 137 (138)
Q Consensus 80 ~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~-~~~~P~~~v~I~~cg~l~ 137 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++ .+++|.++|+|.+||+|+
T Consensus 115 -~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~g~l~ 175 (185)
T 4fru_A 115 -DTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDVTIADCGKIE 175 (185)
T ss_dssp -TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCEEEEEEEEEE
T ss_pred -CCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCEEEEEceEEe
Confidence 8999999999985 99999999999999999999999997 568999999999999984
No 16
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=3.4e-44 Score=262.46 Aligned_cols=127 Identities=25% Similarity=0.371 Sum_probs=116.7
Q ss_pred hhhhHHHhcCCCCC-----eeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeeccc
Q psy1145 2 ATNFELLTIGEFPG-----LSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRRIK 74 (138)
Q Consensus 2 ~~NF~~L~~g~~~g-----~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~~~ 74 (138)
|+||++||+++ .+ ++|+++.||||+|+|+||+||++.+++.|+.++|+.+| ++|++.++| +|+||||+.+
T Consensus 40 ~~NF~~L~~~~-~g~~g~~~~Y~g~~FhRvi~~f~iQgGd~~~~~G~gg~si~g~~f--~dE~~~l~h~~~G~lsmAn~g 116 (177)
T 1mzw_A 40 AENFRQFCTGE-FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPF--ADENFKLRHSAPGLLSMANSG 116 (177)
T ss_dssp HHHHHHHHHTC-CEETTEECSSTTCBCCEEETTTEEEECCTTTSSSCCCCCTTSSCB--CCCCCCSCCCSTTEEEECCSS
T ss_pred HHHHHHHHhcc-cCCcCccceECCCEEEEEECCCEEEcCCcccCCCCCCCccCCCcc--cCcccccccCCCCEEEEccCC
Confidence 79999999976 32 24999999999999999999998889999999999887 899887777 7999999987
Q ss_pred cCCCCCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCC-CCCCcccceEEeeeeEe
Q psy1145 75 KTSENKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSN-AQGQPTERFYISNCGKW 136 (138)
Q Consensus 75 ~~~~~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~-~~~~P~~~v~I~~cg~l 136 (138)
+ ++++|||||++.+ ||++|+|||||++|||||++|+++++ .+++|.++|+|.+||+|
T Consensus 117 p-----~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~cG~l 177 (177)
T 1mzw_A 117 P-----STNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPVVISQCGEM 177 (177)
T ss_dssp T-----TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCEEEEEEEEC
T ss_pred C-----CCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCCCEEEEeceeC
Confidence 6 8999999999985 99999999999999999999999998 77899999999999986
No 17
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=7.9e-45 Score=264.73 Aligned_cols=127 Identities=27% Similarity=0.412 Sum_probs=90.4
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeeccccCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRRIKKTSEN 79 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~~~~~~~~ 79 (138)
|+||++||+|+ ++++|+++.||||+|+|+||+||++.+++.++.|+|+.++ ++|++.++| +|+||||+.++
T Consensus 37 ~~NF~~L~~g~-~g~~Y~g~~fhRvi~~f~iQgGd~~~~~g~gg~si~g~~f--~dE~~~~~h~~~G~lsmA~~gp---- 109 (172)
T 2c3b_A 37 AKNFRELCKRP-AGEGYRESTFHRIIPNFMIQGGDFTRGNGTGGRSIYGDKF--ADENFSRKHDKKGILSMANAGP---- 109 (172)
T ss_dssp HHHHHHHHHSC-TTTSSTTCBCCEEETTTEEEECC------------------------CHHHHHTCEEEEC--------
T ss_pred HHHHHHHhccC-CCcccCCCEEEEEeCCCEEEeCCcCCCCCCCCcccCCCcc--cCcccccccCCCeEEEEeeCCC----
Confidence 79999999998 8878999999999999999999988888999999999887 899877766 89999999876
Q ss_pred CCcceeeEEEEecC---CCCCCeEEEEEEc--CHHHHHHHhcCCCCCC--CcccceEEeeeeEe
Q psy1145 80 KGLVGSQFRIILNH---QKQFTGIFGQVIY--GLEYIDAISTYSNAQG--QPTERFYISNCGKW 136 (138)
Q Consensus 80 ~~~~~SqF~Itl~~---ld~~~~vfG~Vv~--G~~vl~~i~~~~~~~~--~P~~~v~I~~cg~l 136 (138)
++++|||||++.+ ||++|+|||||++ |||||++|+++++.++ +|.++|+|.+||+|
T Consensus 110 -~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P~~~v~I~~cG~l 172 (172)
T 2c3b_A 110 -NTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNTRPKIVNCGEL 172 (172)
T ss_dssp ------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCSSSCCEEEEEEEC
T ss_pred -CCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccCCCCeEEEeCeeC
Confidence 8999999999985 9999999999999 9999999999998666 99999999999986
No 18
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=7.6e-43 Score=263.70 Aligned_cols=127 Identities=21% Similarity=0.319 Sum_probs=116.5
Q ss_pred hhhhHHHhcCCCCC-----eeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeeeeccc
Q psy1145 2 ATNFELLTIGEFPG-----LSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGMRRIK 74 (138)
Q Consensus 2 ~~NF~~L~~g~~~g-----~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm~~~~ 74 (138)
|+||++||+++ ++ ++|+++.||||+|+|+||+||++.+++.|+.+||+.+| ++|++.++| +|+||||+.+
T Consensus 89 v~NF~~L~~~~-~g~~g~~~~Y~gt~FHRVi~~FmiQgGD~~~g~G~Gg~siyg~~f--~dE~~~l~h~~~G~LsMAn~g 165 (229)
T 1z81_A 89 SENFRQFCTGE-YKVNNLPVGYKNTIFHRVIKEFMIQGGDFINHNGSGSLSIYGEKF--DDENFDIKHDKEGLLSMANSG 165 (229)
T ss_dssp HHHHHHHHHTC-CBSSSSBCSSTTEECCEEETTTEEEECCTTTSSSCCCCBTTBSCC--CCCCCCSCCCSTTEEEECCSS
T ss_pred HHHHHHHhhCC-CCCcCCCceECCCEEEEEeCCCEEEcCCCcCCCCCCCCccCCCcc--cccccccccCCCcEEEeccCC
Confidence 89999999976 43 24999999999999999999998899999999999887 999888777 7999999987
Q ss_pred cCCCCCCcceeeEEEEecC---CCCCCeEEEEEE--cCHHHHHHHhcCCCCC--CCcccceEEeeeeEe
Q psy1145 75 KTSENKGLVGSQFRIILNH---QKQFTGIFGQVI--YGLEYIDAISTYSNAQ--GQPTERFYISNCGKW 136 (138)
Q Consensus 75 ~~~~~~~~~~SqF~Itl~~---ld~~~~vfG~Vv--~G~~vl~~i~~~~~~~--~~P~~~v~I~~cg~l 136 (138)
+ ++++||||||+.+ ||++|+|||||+ +|||||++|+++++.. ++|.++|+|.+||+|
T Consensus 166 p-----ntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~P~~~V~I~~cG~l 229 (229)
T 1z81_A 166 P-----NTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYKPKIPINVVECGEL 229 (229)
T ss_dssp S-----SCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCCBSSCEEEEEEEEC
T ss_pred C-----CCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCCCCCCeEEEeCeeC
Confidence 6 8999999999986 999999999999 9999999999999854 899999999999986
No 19
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=2e-41 Score=249.22 Aligned_cols=128 Identities=23% Similarity=0.306 Sum_probs=113.8
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCC-CCCCC--cceeeeeccccCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDES-HLGAR--RGAVGMRRIKKTSE 78 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~-~~~~h--~G~lsm~~~~~~~~ 78 (138)
|+||++||+ +++ |+++.||||+|+|+||+||++ +++.|+.++||.++ ++|. ..++| +|+||||+.+. ..
T Consensus 41 ~~NF~~L~~---~g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~--~dE~~~~l~h~~~G~lsmA~~g~-~~ 112 (185)
T 2poe_A 41 CKNFLALSA---SGY-YKNTIFHKNIKGFIIQGGDPT-GTGKGGESIYGRYF--DDEIYPELKYDRRGILSMASKGA-SK 112 (185)
T ss_dssp HHHHHHHHH---TTT-TTTEEEEEECTTSEEEEEETT-SSSSCCCBTTBSCB--CCCCCTTSCCCSTTEEEECCSCC--C
T ss_pred HHHHHHHhc---cCC-CCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCcc--cccccCCCccCCCeEEEEecCCC-CC
Confidence 799999998 557 999999999999999999976 77888999999887 8887 56666 79999999872 12
Q ss_pred CCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCC-CCCCcccceEEeeeeEec
Q psy1145 79 NKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSN-AQGQPTERFYISNCGKWE 137 (138)
Q Consensus 79 ~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~-~~~~P~~~v~I~~cg~l~ 137 (138)
+|++++|||||++.+ ||++|+|||||++|||||++|+++++ .+++|.++|+|.+|+++.
T Consensus 113 ~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~i~~ 175 (185)
T 2poe_A 113 KPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCPSDKSHKPIDEIIIKDIVIHS 175 (185)
T ss_dssp CCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTSCBSSCCEEEEEEEEC
T ss_pred CCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEEC
Confidence 358999999999985 99999999999999999999999987 558999999999999985
No 20
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=2.4e-41 Score=245.05 Aligned_cols=124 Identities=23% Similarity=0.304 Sum_probs=111.9
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCC-CCCC--cceeeeeccccCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESH-LGAR--RGAVGMRRIKKTSE 78 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~-~~~h--~G~lsm~~~~~~~~ 78 (138)
|+||++||+ +++ |+++.||||+|+|+||+||++ +++.++.++|+..+ ++|.. .++| +|+||||+.++
T Consensus 36 ~~NF~~L~~---~g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~--~dE~~~~l~h~~~G~lsmAn~gp--- 105 (166)
T 2x7k_A 36 CKNFAELAR---RGY-YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGKQF--EDELHPDLKFTGAGILAMANAGP--- 105 (166)
T ss_dssp HHHHHHHHH---HTT-TTTEECCEEETTTEEEECCTT-SSSSCCCCTTSSCB--CCCCCTTSCCCSTTEEEECBSST---
T ss_pred HHHHHHHHh---cCC-CCCCEEEEEECCCEEEcCCCC-CCCCCCCccCCCcc--ccccccccCCCCCeEEEEeeCCC---
Confidence 799999998 567 999999999999999999965 77888999999887 88874 6666 79999998876
Q ss_pred CCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCC-CCCCcccceEEeeeeEec
Q psy1145 79 NKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSN-AQGQPTERFYISNCGKWE 137 (138)
Q Consensus 79 ~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~-~~~~P~~~v~I~~cg~l~ 137 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++ .+++|.++|+|.+|.+++
T Consensus 106 --~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~i~I~~~~i~~ 166 (166)
T 2x7k_A 106 --DTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSG 166 (166)
T ss_dssp --TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSCBCTTSCBSSCCEEEEEEECC
T ss_pred --CCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEeC
Confidence 8999999999985 99999999999999999999999997 447999999999998863
No 21
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=5.2e-41 Score=242.28 Aligned_cols=124 Identities=25% Similarity=0.335 Sum_probs=111.8
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCC-CCCC--cceeeeeccccCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESH-LGAR--RGAVGMRRIKKTSE 78 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~-~~~h--~G~lsm~~~~~~~~ 78 (138)
|+||++||+ +++ |+++.||||+|+|+||+||++ +++.++.++|+.++ ++|.. .++| +|+||||+.++
T Consensus 25 ~~NF~~L~~---~g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~--~dE~~~~l~h~~~G~lsma~~gp--- 94 (161)
T 2ok3_A 25 CENFLALCA---SNY-YNGCIFHRNIKGFMVQTGDPT-GTGRGGNSIWGKKF--EDEYSEYLKHNVRGVVSMANNGP--- 94 (161)
T ss_dssp HHHHHHHHH---TTT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCB--CCCCCTTCCSCSTTEEEECCSST---
T ss_pred HHHHHHHhh---hcc-cCCCEEEEEECCCEEecCCCC-CCCCCCCcccCCcc--ccccCcCcCcCCCeEEEEecCCC---
Confidence 799999998 556 999999999999999999976 77888999999887 88875 5555 89999999875
Q ss_pred CCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCC--CCcccceEEeeeeEec
Q psy1145 79 NKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQ--GQPTERFYISNCGKWE 137 (138)
Q Consensus 79 ~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~--~~P~~~v~I~~cg~l~ 137 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++.. ++|.++|+|.+|.++.
T Consensus 95 --~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~P~~~v~I~~~~i~~ 156 (161)
T 2ok3_A 95 --NTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHA 156 (161)
T ss_dssp --TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTTCCBSSCCBEEEEEEEC
T ss_pred --CCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCCccCCCCCcCCCeEEEEEEEec
Confidence 8999999999985 9999999999999999999999999744 7999999999999875
No 22
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=6.9e-41 Score=248.19 Aligned_cols=124 Identities=23% Similarity=0.283 Sum_probs=112.4
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCC-CCCCCC--cceeeeeccccCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDE-SHLGAR--RGAVGMRRIKKTSE 78 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e-~~~~~h--~G~lsm~~~~~~~~ 78 (138)
|+||++||+ +++ |+++.||||+|+|+|||||++ +++.|+.++||.++ ++| +..+.| +|+||||+.++
T Consensus 44 v~NF~~L~~---~g~-Ydg~~FhRVi~~f~iQgGd~~-~~g~Gg~si~g~~f--~dE~~~~l~h~~~G~lsMAn~gp--- 113 (197)
T 1zkc_A 44 CENFIRLCK---KHY-YDGTIFHRSIRNFVIQGGDPT-GTGTGGESYWGKPF--KDEFRPNLSHTGRGILSMANSGP--- 113 (197)
T ss_dssp HHHHHHHHH---TTT-TTTEEEEEEETTTEEEECCTT-SSSSCCCBTTBSCB--CCCCCTTCCSCSTTEEEECCSST---
T ss_pred HHHHHHHHh---cCC-CCCCEEEEEeCCCEEEcCCCC-CCCCCCCccCCCcc--ccccCcCcCCCCceEEEEecCCC---
Confidence 799999998 667 999999999999999999965 77888999999887 888 456666 79999999876
Q ss_pred CCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCC--CCcccceEEeeeeEec
Q psy1145 79 NKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQ--GQPTERFYISNCGKWE 137 (138)
Q Consensus 79 ~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~--~~P~~~v~I~~cg~l~ 137 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++.. ++|.++|+|.+|+++.
T Consensus 114 --~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~i~I~~~~v~~ 175 (197)
T 1zkc_A 114 --NSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVESDPKTDRPKEEIRIDATTVFV 175 (197)
T ss_dssp --TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSCBCTTTCCBSSCCEEEEEEEEE
T ss_pred --CCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCCCCCCCCCcCCCeEEEEEEEEc
Confidence 8999999999985 9999999999999999999999999744 8999999999999985
No 23
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=4.7e-41 Score=255.01 Aligned_cols=127 Identities=22% Similarity=0.396 Sum_probs=108.0
Q ss_pred hhhhHHHhcCCC----------C----C--eeecCCEEEEEeCCcEEEeCCCCCCCCCCcccccccc-----ccCCCCCC
Q psy1145 2 ATNFELLTIGEF----------P----G--LSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQE-----YFRPDESH 60 (138)
Q Consensus 2 ~~NF~~L~~g~~----------~----g--~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~-----~~~~~e~~ 60 (138)
|+||++||+|+. + | ++|+|+.||||+|+|||||||++.+++.|+.|+||.. | + ++
T Consensus 44 v~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~FmiQgGd~~~g~G~Gg~siyg~~~~p~~f--~--~~ 119 (234)
T 2ose_A 44 VENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNNYIVSGDIYNSNGSSAGTVYCDEPIPPVF--G--DY 119 (234)
T ss_dssp HHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTTEEEECCCC----CCCCCTTTTCCBCCCC--C--SC
T ss_pred HHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCCEEEcCCccCCCCCCCccccCCccCcccc--c--Cc
Confidence 799999999640 1 3 6699999999999999999999889999999999986 5 4 45
Q ss_pred CCCC--cceeeeec----cccCCCCCCcceeeEEEEecC---------CCCCCeEEEEEEcCHHHHHHHhcCCCC-CCCc
Q psy1145 61 LGAR--RGAVGMRR----IKKTSENKGLVGSQFRIILNH---------QKQFTGIFGQVIYGLEYIDAISTYSNA-QGQP 124 (138)
Q Consensus 61 ~~~h--~G~lsm~~----~~~~~~~~~~~~SqF~Itl~~---------ld~~~~vfG~Vv~G~~vl~~i~~~~~~-~~~P 124 (138)
.++| +|+||||| .++ ++++||||||+.+ ||++|+|||||++|||||++|+++++. +++|
T Consensus 120 ~l~h~~~G~lsMAn~~~~~gp-----ntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~I~~~~t~~~~~P 194 (234)
T 2ose_A 120 FYPHESKGLLSLVPYTDESGN-----RYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLDKINSMIKPYAGRK 194 (234)
T ss_dssp CCCSCSTTEEEECCEECTTSC-----EEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHHHHHHHHHHTCCCTTCC
T ss_pred CccCCCCCEEEEecccccCCC-----CCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCc
Confidence 6666 79999999 554 8999999999965 899999999999999999999999984 4899
Q ss_pred ccceEEeeeeEec
Q psy1145 125 TERFYISNCGKWE 137 (138)
Q Consensus 125 ~~~v~I~~cg~l~ 137 (138)
.++|+|.+||++.
T Consensus 195 ~~~V~I~~~~~l~ 207 (234)
T 2ose_A 195 YPTFSIGKCGAYL 207 (234)
T ss_dssp CCCEEEEEEEECC
T ss_pred cCCEEEEEEEEec
Confidence 9999999999985
No 24
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=8.4e-41 Score=240.95 Aligned_cols=123 Identities=27% Similarity=0.327 Sum_probs=111.5
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCC-CCCC--cceeeeeccccCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESH-LGAR--RGAVGMRRIKKTSE 78 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~-~~~h--~G~lsm~~~~~~~~ 78 (138)
|+||++||+ +++ |+++.||||+|+|+||+||++ +++.++.++||.++ ++|.. .++| +|+||||+.++
T Consensus 30 ~~NF~~L~~---~g~-Y~g~~fhRvi~~f~iQgGd~~-~~g~gg~si~g~~~--~dE~~~~l~h~~~G~lsmA~~gp--- 99 (160)
T 2fu0_A 30 VQNFSVHSI---NGY-YNNCIFHRVIKHFMVQTGDPS-GDGTGGESIWGNEF--EDEFFDHLNHSKPFMVSMANCGP--- 99 (160)
T ss_dssp HHHHHHHHH---TTT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCB--CCCCBTTBCSSSSSEEEECCSST---
T ss_pred HHHHHHHhc---cCc-cCCCEEEEEECCCEEEeCCcC-CCCCCCCcccCCCc--cccccCCcccCCceEEEEecCCC---
Confidence 799999998 567 999999999999999999964 67888999999887 89977 4666 69999999875
Q ss_pred CCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCC-CCCCcccceEEeeeeEe
Q psy1145 79 NKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSN-AQGQPTERFYISNCGKW 136 (138)
Q Consensus 79 ~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~-~~~~P~~~v~I~~cg~l 136 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++ .+++|.++|+|.+|.++
T Consensus 100 --~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v~I~~~~v~ 159 (160)
T 2fu0_A 100 --NTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVRTDKRDKPLEDIKILNIKIN 159 (160)
T ss_dssp --TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCCBEEEEEEC
T ss_pred --CCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEe
Confidence 8999999999985 99999999999999999999999997 46899999999999875
No 25
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=8.8e-41 Score=247.54 Aligned_cols=124 Identities=23% Similarity=0.246 Sum_probs=110.9
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCC-CCCCC--cceeeeeccccCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDES-HLGAR--RGAVGMRRIKKTSE 78 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~-~~~~h--~G~lsm~~~~~~~~ 78 (138)
|+||++||+ +++ |+|+.||||+|+|+||+||++ +++.|+.++||.++ ++|. ..++| +|+||||+.++
T Consensus 63 v~NF~~L~~---~g~-Y~g~~FhRVi~~f~iQgGd~~-~~g~gg~si~g~~~--~dE~~~~l~h~~~G~lsMAn~gp--- 132 (196)
T 2b71_A 63 CLNFYTLCE---MGF-YDNTIFHRVIPNFVIQGGDPT-GTGKGGKSIYGEYF--EDEINKELKHTGAGILSMSNNGP--- 132 (196)
T ss_dssp HHHHHHHHH---TTT-TTTEEEEEEETTTEEEEEETT-SSSSCCCBTTBSCB--CCCCCTTCCCCSTTEEEECCSST---
T ss_pred HHHHHHHhh---cCC-cCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCCcc--cccccCCcCcCCCeEEEEccCCC---
Confidence 799999998 567 999999999999999999976 77889999999887 8884 45666 89999998876
Q ss_pred CCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCC-CCCCcccceEEeeeeEec
Q psy1145 79 NKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSN-AQGQPTERFYISNCGKWE 137 (138)
Q Consensus 79 ~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~-~~~~P~~~v~I~~cg~l~ 137 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++ .+++|.++|+|.+|.++.
T Consensus 133 --ns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~~~i~~ 193 (196)
T 2b71_A 133 --NTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQTTATNKPIFDLKILRTSTAV 193 (196)
T ss_dssp --TCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTCCBSSCCEEEEEEC--
T ss_pred --CCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCCcCCCCCCCCCeEEEEEEEec
Confidence 8999999999985 99999999999999999999999987 568999999999999874
No 26
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=1.3e-40 Score=247.63 Aligned_cols=125 Identities=22% Similarity=0.300 Sum_probs=112.8
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCC-CCCCC--cceeeeeccccCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDES-HLGAR--RGAVGMRRIKKTSE 78 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~-~~~~h--~G~lsm~~~~~~~~ 78 (138)
|+||++||+ +++ |+++.||||+|+|+||+||++ +++.++.++|+..+ ++|. ..++| +|+||||+.++
T Consensus 36 v~NF~~L~~---~g~-Ydg~~FhRVi~~F~iQgGd~~-~~g~gg~si~g~~f--~dE~~~~l~h~~~G~lsMAn~gp--- 105 (203)
T 2k7n_A 36 CKNFAELAR---RGY-YNGTKFHRIIKDFMIQGGDPT-GTGRGGASIYGKQF--EDELHPDLKFTGAGILAMANAGP--- 105 (203)
T ss_dssp HHHHHHHHH---HTC-GGGCEEEEEETTTEEEEECSS-SSSSCCCTTSCSCB--CCCCCCSSCCCSSCEEEEEESST---
T ss_pred HHHHHHHHh---cCc-cCCCEEEEEeCCcEEEcCCCC-CCCCCCCccCCCcc--cccccccccCCCCeEEEEeeCCC---
Confidence 799999998 567 999999999999999999965 67888999999887 8887 46666 79999998775
Q ss_pred CCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCC-CCCCcccceEEeeeeEecC
Q psy1145 79 NKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSN-AQGQPTERFYISNCGKWEG 138 (138)
Q Consensus 79 ~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~-~~~~P~~~v~I~~cg~l~~ 138 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++ .+++|.++|+|.+|+++++
T Consensus 106 --nsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~~t~~~~~P~~~V~I~~~~v~~~ 167 (203)
T 2k7n_A 106 --DTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVETNSQDRPVDDVKIIKAYPSGG 167 (203)
T ss_dssp --TCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSCCEEETTEECCCCBEEEEEECCC
T ss_pred --CCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEEec
Confidence 8999999999985 99999999999999999999999997 4579999999999999864
No 27
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=2.6e-40 Score=246.12 Aligned_cols=124 Identities=17% Similarity=0.155 Sum_probs=106.0
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeC-----CCCCCCCCCccccc-------cccccCCCC-CCCCCC--cc
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITG-----SFRYGDKTEGRSVF-------VQEYFRPDE-SHLGAR--RG 66 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~G-----d~~~~~~~g~~si~-------g~~~~~~~e-~~~~~h--~G 66 (138)
|+||++||+ +++ |+|+.||||+|+|||||| |++ +++.|+.++| +..+ ++| +..++| +|
T Consensus 31 ~~NF~~L~~---~g~-Ydg~~FhRvi~~f~iQgG~~~~~Dp~-~~g~gg~si~~~~~~~~g~~f--~dE~~~~l~h~~~G 103 (201)
T 3bo7_A 31 CDSFLRLCA---VKY-FDDTIFHRCIRNFMIQGGRAELRQPS-KKKEVQQSPRSISGFPGGAPF--EDEFDNRLVHQGIG 103 (201)
T ss_dssp HHHHHHHHH---TTT-TTTCBEEEEETTTEEEECCGGGCCC--------CCSSCCCSSTTCCCB--CCCCCTTCCCCSTT
T ss_pred HHHHHHHHh---cCc-cCCCEEEEeeCCCEEEcCcccccCCC-CCCCCCccccccccccCCCcc--cCcccCCCCcCCCc
Confidence 799999998 567 999999999999999999 965 7788899999 7766 888 456666 79
Q ss_pred eeeeeccccCCCCCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCC-CCCCcccceEEeeeeEec
Q psy1145 67 AVGMRRIKKTSENKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSN-AQGQPTERFYISNCGKWE 137 (138)
Q Consensus 67 ~lsm~~~~~~~~~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~-~~~~P~~~v~I~~cg~l~ 137 (138)
+||||+.++ ++++|||||++.+ ||++|+|||||++|||||++|+++++ .+++|.++|+|.+|+++.
T Consensus 104 ~lsmA~~gp-----~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~i~I~~~~v~~ 173 (201)
T 3bo7_A 104 VLSMANDGK-----HSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLETDKKDKPLKPPKVEEIIVFK 173 (201)
T ss_dssp EEEECCSST-----TCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCCBCTTSCBSSCCBEEEEEEEE
T ss_pred EEEEeeCCC-----CCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCCcCCCCCcCCCeEEEEEEEEc
Confidence 999999875 8999999999985 99999999999999999999999997 458999999999999985
No 28
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=3.6e-40 Score=240.81 Aligned_cols=122 Identities=25% Similarity=0.303 Sum_probs=110.6
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCC-CCCC--cceeeeeccccCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESH-LGAR--RGAVGMRRIKKTSE 78 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~-~~~h--~G~lsm~~~~~~~~ 78 (138)
|+||++||+ +++ |+++.||||+|+|+||+||+. +++.++.++||.++ ++|.+ .++| +|+||||+.++
T Consensus 46 ~~NF~~L~~---~g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~--~dE~~~~l~h~~~G~lsmA~~gp--- 115 (176)
T 2a2n_A 46 VENFCVHSR---NGY-YNGHTFHRIIKGFMIQTGDPT-GTGMGGESIWGGEF--EDEFHSTLRHDRPYTLSMANAGS--- 115 (176)
T ss_dssp HHHHHHHHH---TTT-TTTCBCCEEETTTEEEECCTT-SSSSCCCCTTSSCB--CCCCCTTCCSCSSSEEEECCSST---
T ss_pred HHHHHHHhh---cCc-cCCCEEEEEECCcEEEccCCC-CCCCCCCcccCCcc--ccccccccccCCceEEEEEeCCC---
Confidence 799999998 556 999999999999999999964 67888999999887 89987 4666 69999999876
Q ss_pred CCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCC--CCCcccceEEeeeeE
Q psy1145 79 NKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNA--QGQPTERFYISNCGK 135 (138)
Q Consensus 79 ~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~--~~~P~~~v~I~~cg~ 135 (138)
++++|||||++.+ ||++|+|||||++|||||++|+++++. +++|.++|+|.+|-+
T Consensus 116 --~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~~P~~~v~I~~v~v 175 (176)
T 2a2n_A 116 --NTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITV 175 (176)
T ss_dssp --TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTTCCBSSCCBEEEEEE
T ss_pred --CCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCCccCCCCccCCCeEEEEEEE
Confidence 8999999999985 999999999999999999999999975 789999999999864
No 29
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=7e-40 Score=241.94 Aligned_cols=123 Identities=24% Similarity=0.236 Sum_probs=106.7
Q ss_pred hhhhHHHhcCCCCC------------eeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCC-CCCCCC--cc
Q psy1145 2 ATNFELLTIGEFPG------------LSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDE-SHLGAR--RG 66 (138)
Q Consensus 2 ~~NF~~L~~g~~~g------------~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e-~~~~~h--~G 66 (138)
|+||++||+|+ ++ ..|+|+.||||+|+|+||+||+ .+++.++ ||..| ++| ++.++| +|
T Consensus 48 v~NF~~L~tG~-~~~~~~~~g~~~~~~~Y~g~~FhRVi~~fmiQgGd~-~g~G~gg---~g~~f--~dE~~~~l~h~~~G 120 (191)
T 1w74_A 48 VANFVGLAQGT-KDYSTQNASGGPSGPFYDGAVFHRVIQGFMIQGGDP-TGTGRGG---PGYKF--ADEFHPELQFDKPY 120 (191)
T ss_dssp HHHHHHHHHTC-SCCSSCCTTBSSSSCSSTTEEEEEEETTTEEEECCT-TSSSSCC---SSCCB--CCCCCTTCCSCSSS
T ss_pred HHHHHHHhcCC-cccccccccccccCCccCCCEEEEEeCCCEEecCCC-CCCCCCC---CCCcc--ccccccCCCcCCCc
Confidence 79999999775 32 2499999999999999999995 4566665 56666 888 456766 79
Q ss_pred eeeeeccccCCCCCCcceeeEEEEecC---CCCCCeEEEEEEc--CHHHHHHHhcCCC-CCCCcccceEEeeeeEe
Q psy1145 67 AVGMRRIKKTSENKGLVGSQFRIILNH---QKQFTGIFGQVIY--GLEYIDAISTYSN-AQGQPTERFYISNCGKW 136 (138)
Q Consensus 67 ~lsm~~~~~~~~~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~--G~~vl~~i~~~~~-~~~~P~~~v~I~~cg~l 136 (138)
+|||||.++ ++++||||||+.+ ||++|+|||||++ |||||++|+++++ .+++|.++|+|.+|+++
T Consensus 121 ~lsMAn~gp-----ntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~t~~~~~P~~~v~I~~~~i~ 191 (191)
T 1w74_A 121 LLAMANAGP-----GTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTATDGNDRPTDPVVIESITIS 191 (191)
T ss_dssp EEEECCSST-----TCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSCBCTTSCBSSCCEEEEEEEC
T ss_pred EEEEeeCCC-----CCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCCcCCCCCcCCCeEEEEEEEC
Confidence 999999876 8999999999985 9999999999999 9999999999997 56899999999999974
No 30
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=7.4e-40 Score=261.33 Aligned_cols=129 Identities=26% Similarity=0.427 Sum_probs=118.3
Q ss_pred ChhhhHHHhcCCCCCe--------eecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCCCCCC--cceeee
Q psy1145 1 MATNFELLTIGEFPGL--------SYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESHLGAR--RGAVGM 70 (138)
Q Consensus 1 ~~~NF~~L~~g~~~g~--------~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~~~~h--~G~lsm 70 (138)
.|+||++||+++ +++ +|+||.||||+|+|||||||++.++|+|+.+|||..| ++|++.++| +|+|||
T Consensus 44 t~~nf~~l~~~~-~~~~~~~g~~~~y~~~~fhrv~~~f~~q~Gd~~~~~g~g~~~~~~~~~--~~e~~~~~~~~~g~l~m 120 (370)
T 1ihg_A 44 TAENFRALCTGE-KGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKF--EDENFHYKHDKEGLLSM 120 (370)
T ss_dssp HHHHHHHHHHCT-TCBCTTTSSBSCCTTCBEEEEETTTEEEECCTTTSSSSCCCBTTBSCB--CCCCCCBCCCSTTEEEE
T ss_pred HHHHHHHHcCCC-cCcCccCCCcceeCCcEeEEEECCcEEECCCCCCCCCCCCCCCCCCCc--CCCcCCcCCCCCeEEEE
Confidence 389999999986 432 4999999999999999999999899999999999887 999887777 799999
Q ss_pred eccccCCCCCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHHHHHhcCCCCCCCcccceEEeeeeEec
Q psy1145 71 RRIKKTSENKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYIDAISTYSNAQGQPTERFYISNCGKWE 137 (138)
Q Consensus 71 ~~~~~~~~~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl~~i~~~~~~~~~P~~~v~I~~cg~l~ 137 (138)
|+.++ ++++||||||+.+ ||++|+|||+|++||+||++|+.+++..++|..+|+|.+||++.
T Consensus 121 a~~~~-----~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~~~~~~P~~~v~I~~~g~l~ 185 (370)
T 1ihg_A 121 ANAGS-----NTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVEVKGEKPAKLCVIAECGELK 185 (370)
T ss_dssp CCSST-----TCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCEETTEESSCEEEEEEEEEC
T ss_pred eeCCC-----CCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCCCCCCccceeEEEEEEEEec
Confidence 99876 8999999999985 89999999999999999999999988669999999999999984
No 31
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=1.2e-39 Score=235.76 Aligned_cols=123 Identities=22% Similarity=0.254 Sum_probs=106.6
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCC-CCCC-cceeeeeccccCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESH-LGAR-RGAVGMRRIKKTSEN 79 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~-~~~h-~G~lsm~~~~~~~~~ 79 (138)
|+||++||+ +++ |+++.||||+|+||||+||++.+. +.++++.++ ++|.. .++| +|+||||+.. .
T Consensus 24 ~~NF~~L~~---~g~-Y~g~~FhRvi~~f~iQgGd~~~~~---g~~~~g~~~--~dE~~~~l~~~~G~lsmA~~~----~ 90 (164)
T 1lop_A 24 VKNFLDYCR---EGF-YNNTIFHRVINGFMIQGGGFEPGM---KQKATKEPI--KNEANNGLKNTRGTLAMARTQ----A 90 (164)
T ss_dssp HHHHHHHHH---TTT-TTTEECCEEETTTEEEESSEETTT---EECCCCCCB--CCCCCSSCCCCTTEEEECCCS----S
T ss_pred HHHHHHHHh---cCC-CCCCEEEEEeCCceEecCCcccCC---CcCCCCCcc--ccccccccccCccEEEEeecC----C
Confidence 799999998 667 999999999999999999976433 456788777 88875 3666 8999999752 2
Q ss_pred CCcceeeEEEEecC---CCCC--------CeEEEEEEcCHHHHHHHhcCCCC-----CCCcccceEEeeeeEec
Q psy1145 80 KGLVGSQFRIILNH---QKQF--------TGIFGQVIYGLEYIDAISTYSNA-----QGQPTERFYISNCGKWE 137 (138)
Q Consensus 80 ~~~~~SqF~Itl~~---ld~~--------~~vfG~Vv~G~~vl~~i~~~~~~-----~~~P~~~v~I~~cg~l~ 137 (138)
|++++|||||++.+ ||++ |+|||||++|||||++|+++++. +++|.++|+|.+|++++
T Consensus 91 p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~~~v~~ 164 (164)
T 1lop_A 91 PHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVATGRSGMHQDVPKEDVIIESVTVSE 164 (164)
T ss_dssp TTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCEEEEEEECC
T ss_pred CCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCCcCCccccCCCcCCCeEEEEEEEeC
Confidence 48999999999985 8987 99999999999999999999874 37999999999999874
No 32
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=3.3e-38 Score=232.03 Aligned_cols=123 Identities=24% Similarity=0.280 Sum_probs=109.1
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCC-CCCC--cceeeeeccccCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESH-LGAR--RGAVGMRRIKKTSE 78 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~-~~~h--~G~lsm~~~~~~~~ 78 (138)
|+||++||+ +++ |+++.||||+|+|+||+||++ +++.|+.++||.++ ++|.. .++| +|+||||+.++
T Consensus 49 v~NF~~L~~---~g~-Y~g~~FhRvi~~f~iQgGd~~-~~g~gg~si~g~~~--~dE~~~~l~h~~~G~lsMA~~g~--- 118 (185)
T 2hq6_A 49 CRNFIQLCL---EAY-YDNTIFHRVVPGFIVQGGDPT-GTGSGGESIYGAPF--KDEFHSRLRFNRRGLVAMANAGS--- 118 (185)
T ss_dssp HHHHHHHHH---TTT-TTTEECCEEETTTEEEECCTT-SSSSCCCCTTSSCB--CCCCBTTBCSCSSSEEEECCSST---
T ss_pred HHHHHHHhh---cCc-cCCCEEEEEECCCEEEcCCCC-CCCCCCCcccCCcc--ccccccCcccCCCeEEEEccCCC---
Confidence 799999998 556 999999999999999999975 77888999999887 88875 4554 89999999876
Q ss_pred CCCcceeeEEEEecC---CCCCCeEEEEEEcCHHHH--HHHhcCCC-CCCCcccceEEeeeeEec
Q psy1145 79 NKGLVGSQFRIILNH---QKQFTGIFGQVIYGLEYI--DAISTYSN-AQGQPTERFYISNCGKWE 137 (138)
Q Consensus 79 ~~~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~vl--~~i~~~~~-~~~~P~~~v~I~~cg~l~ 137 (138)
++++|||||++.+ ||++|+|||||+ ||+++ ++|+++++ .+++|.++|+|.+|++++
T Consensus 119 --~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~~~~i~~~~~~~~~~P~~~v~I~~~~v~~ 180 (185)
T 2hq6_A 119 --HDNGSQFFFTLGRADELNNKHTIFGKVT-GDTVYNMLRLSEVDIDDDERPHNPHKIKSCEVLF 180 (185)
T ss_dssp --TCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHTTCSCBCTTSCBSSCCEEEEEEEEE
T ss_pred --CCccceEEEECCCCCccCCCceEEEEEE-eCeeehhhHHhhCCcCCCCCCCCCeEEEEEEEeC
Confidence 8999999999985 999999999999 88774 67888886 678999999999999985
No 33
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=4.9e-38 Score=227.73 Aligned_cols=123 Identities=22% Similarity=0.262 Sum_probs=104.0
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCCC-CCCC-cceeeeeccccCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDESH-LGAR-RGAVGMRRIKKTSEN 79 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~~-~~~h-~G~lsm~~~~~~~~~ 79 (138)
|+||++||+ +++ |+++.||||+|+||||+||++...+ .+.++.++ ++|.. .++| +|+||||+.+ .
T Consensus 29 ~~NF~~L~~---~g~-Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~g~~~--~dE~~~~l~~~~G~lsmA~~~----~ 95 (166)
T 1v9t_A 29 VQNFVDYVN---SGF-YNNTTFHRVIPGFMIQGGGFTEQMQ---QKKPNPPI--KNEADNGLRNTRGTIAMARTA----D 95 (166)
T ss_dssp HHHHHHHHH---TTT-TTTCBEEEEETTTEEEESSBCTTCC---BCCCCCCB--CCCGGGSCCCCTTEEEECCCS----S
T ss_pred HHHHHHHhc---cCC-CCCCEEEEEECCcEEEcCCcCcCCC---CCCCCCcc--cccccccccCCceEEEEeecC----C
Confidence 799999998 667 9999999999999999999765432 23456666 88865 3455 8999999863 2
Q ss_pred CCcceeeEEEEecC---CCCC-----CeEEEEEEcCHHHHHHHhcCCCCC-----CCcccceEEeeeeEec
Q psy1145 80 KGLVGSQFRIILNH---QKQF-----TGIFGQVIYGLEYIDAISTYSNAQ-----GQPTERFYISNCGKWE 137 (138)
Q Consensus 80 ~~~~~SqF~Itl~~---ld~~-----~~vfG~Vv~G~~vl~~i~~~~~~~-----~~P~~~v~I~~cg~l~ 137 (138)
|++++|||||++.+ ||++ |+|||||++|||||++|+++++.+ ++|.++|+|.+|.+++
T Consensus 96 p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~~~~~~~~~~~P~~~v~I~~~~v~~ 166 (166)
T 1v9t_A 96 KDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSATVLP 166 (166)
T ss_dssp TTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSCEEEETTEEEEESSCCBEEEEEECC
T ss_pred CCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCCCCCCCccCCCcCCCeEEEEEEEeC
Confidence 48999999999985 8988 999999999999999999998743 7899999999999874
No 34
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=1.4e-37 Score=225.56 Aligned_cols=122 Identities=20% Similarity=0.233 Sum_probs=102.4
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccccccccCCCCC-CCCCC-cceeeeeccccCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVFVQEYFRPDES-HLGAR-RGAVGMRRIKKTSEN 79 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~g~~~~~~~e~-~~~~h-~G~lsm~~~~~~~~~ 79 (138)
|+||++||+ +++ |+++.||||+|+|+||+||++...+ .+.++.++ ++|. ..++| +|+|||||.+ .
T Consensus 28 ~~NF~~L~~---~g~-Y~g~~FhRvi~~f~iQgGd~~~~~~---~~~~~~~~--~~E~~~~l~~~~G~lsmA~~~----~ 94 (167)
T 3s6m_A 28 VENFLNYVK---KGH-YDGTIFHRVINGFMIQGGGFEPGLK---QKPTDAPI--ANEANNGLKNDTYTIAMARTN----D 94 (167)
T ss_dssp HHHHHHHHH---HTT-TTTEECCEEETTTEEEESSEETTTE---ECCCCCCB--CCCGGGCCCCCTTEEEECCCS----S
T ss_pred HHHHHHHhh---hcc-cCCCEeEEecCCcEEEeccccCCCC---CCCCCCcc--CCcccccccCCccEEEEecCC----C
Confidence 799999998 556 9999999999999999999765432 23456655 7774 34556 8999999842 2
Q ss_pred CCcceeeEEEEecC---CCCC--------CeEEEEEEcCHHHHHHHhcCCCC-----CCCcccceEEeeeeEe
Q psy1145 80 KGLVGSQFRIILNH---QKQF--------TGIFGQVIYGLEYIDAISTYSNA-----QGQPTERFYISNCGKW 136 (138)
Q Consensus 80 ~~~~~SqF~Itl~~---ld~~--------~~vfG~Vv~G~~vl~~i~~~~~~-----~~~P~~~v~I~~cg~l 136 (138)
|++++|||||++.+ ||++ |+|||||++|||||++|+++++. +++|.++|+|.+|.+|
T Consensus 95 p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~t~~~~~~~~~P~~~v~I~~~~il 167 (167)
T 3s6m_A 95 PHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVKTGSKGFHQDVPNDDVVIEKAVVV 167 (167)
T ss_dssp TTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSCBBC---CBTCBSSCCEEEEEEEC
T ss_pred CCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCCcCCCcccCCCcCCCeEEEEEEEC
Confidence 48999999999985 8988 99999999999999999999984 4799999999999875
No 35
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.6e-37 Score=235.31 Aligned_cols=128 Identities=23% Similarity=0.322 Sum_probs=107.8
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCCccccc--cccccCCCCCC-CCCC--cceeeeeccccC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTEGRSVF--VQEYFRPDESH-LGAR--RGAVGMRRIKKT 76 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g~~si~--g~~~~~~~e~~-~~~h--~G~lsm~~~~~~ 76 (138)
|+||++||+ .++ |+++.||||+|+|||||||++ +++.|+.++| |..| ++|.. .++| +|+||||+.++.
T Consensus 46 v~NF~~L~~---~g~-Ydgt~FhRVi~~FmiQgGdp~-~~G~Gg~si~~~g~~f--~dE~~~~l~h~~~G~lsMA~~g~~ 118 (232)
T 3bkp_A 46 CRNFVQLCL---EGY-YVNTIFHRVVKDFIVQGGDPT-GTGRGGADTTFDGKPF--DVETHPRLKFRYRGLVGVANLGRS 118 (232)
T ss_dssp HHHHHHHHH---HTT-TTTCBEEEEETTTEEEECCTT-SSSSCCCCCTTTTCCB--CCCCCTTCCCCSTTEEEECCCC--
T ss_pred HHHHHHHhh---cCc-cCCCEEEEEeCCCEEEcCCCC-CCCCCCCccccCCCcc--CCccccCcCcCCCeEEEEeccCCc
Confidence 799999998 556 999999999999999999976 7788999999 7776 88875 5655 799999998762
Q ss_pred ---CCCC------CcceeeEEEEecC---CCCCCeEEEEEEcCHHH--HHHHhcCCC-CCCCcccceEEeeeeEec
Q psy1145 77 ---SENK------GLVGSQFRIILNH---QKQFTGIFGQVIYGLEY--IDAISTYSN-AQGQPTERFYISNCGKWE 137 (138)
Q Consensus 77 ---~~~~------~~~~SqF~Itl~~---ld~~~~vfG~Vv~G~~v--l~~i~~~~~-~~~~P~~~v~I~~cg~l~ 137 (138)
.++| ++++||||||+.+ ||++|+|||||+ ||+| |++|+++++ .+++|.++|+|.+|+++.
T Consensus 119 ~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v~~v~kI~~~~t~~~~~P~~~i~I~~~~vl~ 193 (232)
T 3bkp_A 119 SKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTLYNLMKFNDLEVGKEDRPMTPPFIKSVDVLW 193 (232)
T ss_dssp --------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGHHHHHHHTTSCBCGGGCBSSCCBEEEEEEEE
T ss_pred ccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCchHHHHHHHcCCcCCCCCcCCCeEEEEEEEEc
Confidence 0111 6899999999985 999999999999 6655 899999987 678999999999999985
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.97 E-value=8.1e-32 Score=214.98 Aligned_cols=115 Identities=17% Similarity=0.159 Sum_probs=92.5
Q ss_pred hhhhHHHhcCCCCCeeecCCEEEEEeCCcEEEeCCCCCCCCCC---------------------ccccccccccCCCCCC
Q psy1145 2 ATNFELLTIGEFPGLSYRNCALSQLWQFESIITGSFRYGDKTE---------------------GRSVFVQEYFRPDESH 60 (138)
Q Consensus 2 ~~NF~~L~~g~~~g~~Y~gt~f~ri~~~~~iq~Gd~~~~~~~g---------------------~~si~g~~~~~~~e~~ 60 (138)
|+||++||+ +++ |+|+.|||| |+||||+||++ +++.| +.++|+..+ ++|++
T Consensus 203 v~NFl~L~~---~Gf-YdGt~FHRV-~gFmIQgGDp~-g~G~G~~~~~~g~~~~iP~E~~~~G~g~piyg~~f--edegf 274 (369)
T 3rfy_A 203 AGNFVDLVE---RHF-YDGMEIQRS-DGFVVQTGDPE-GPAEGFIDPSTEKTRTVPLEIMVTGEKTPFYGSTL--EELGL 274 (369)
T ss_dssp HHHHHHHHH---TTT-TTTEECEEE-EEEEECCCCCC-CCCSCCCSCCCCCCCSSSSSSCSSSSCCSCCCSST--GGGTE
T ss_pred HHHHHHHhh---cCC-cCCCeeeee-CCeeEecCCCC-CCCCCccCcccCcCcccCccccccCCCCCcCCCcc--ccccc
Confidence 799999998 667 999999999 99999999976 44444 456777766 66653
Q ss_pred -----CCCC--cceeeeeccccCCCCCCcceeeEEEEec----------CCCCCCeEEEEEEcCHHHHHHHhcCCCCCCC
Q psy1145 61 -----LGAR--RGAVGMRRIKKTSENKGLVGSQFRIILN----------HQKQFTGIFGQVIYGLEYIDAISTYSNAQGQ 123 (138)
Q Consensus 61 -----~~~h--~G~lsm~~~~~~~~~~~~~~SqF~Itl~----------~ld~~~~vfG~Vv~G~~vl~~i~~~~~~~~~ 123 (138)
.++| +|+|||||.+. .||+++||||||+. +||++|+|||||++|||||++|++ +.
T Consensus 275 ~~~~~~L~h~~~G~LsMAns~~---gPnSngSQFFItl~d~~L~~~~~~~LDgkytVFG~VveGmdVVdkI~~-----GD 346 (369)
T 3rfy_A 275 YKAQVVIPFNAFGTMAMAREEF---ENDSGSSQVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLKV-----GD 346 (369)
T ss_dssp EEEEEEECCCCCCCCCCSSCCC---CCCCSSCCCCCCCEEEEECSCCCSSSCSCEEEEEEEEESTTGGGGCCT-----TC
T ss_pred cccccccccCCCceEEEeecCC---CCCCccceEEEEecccccCCCCCcccCCCeeEEEEEecCHHHHHHHhC-----CC
Confidence 3443 89999999721 34899999999983 389999999999999999999987 44
Q ss_pred cccceEEee
Q psy1145 124 PTERFYISN 132 (138)
Q Consensus 124 P~~~v~I~~ 132 (138)
....|+|.+
T Consensus 347 ~I~sv~I~~ 355 (369)
T 3rfy_A 347 VIESIQVVS 355 (369)
T ss_dssp EEEEEEEEE
T ss_pred ceEEEEEec
Confidence 566677664
No 37
>3q6c_A Probable receptor YHHM; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.60A {Klebsiella variicola at-22}
Probab=46.38 E-value=10 Score=23.55 Aligned_cols=25 Identities=28% Similarity=0.563 Sum_probs=19.7
Q ss_pred hhHHHhcCCCCC-eeecCCEEEEEeCC
Q psy1145 4 NFELLTIGEFPG-LSYRNCALSQLWQF 29 (138)
Q Consensus 4 NF~~L~~g~~~g-~~Y~gt~f~ri~~~ 29 (138)
-|-.|+.|+ +| +.|+||.|....|+
T Consensus 56 ~Y~~l~~Gd-~G~Lt~QGTRF~~F~~~ 81 (83)
T 3q6c_A 56 QYHALSVGD-RGMLSYKGTAFVAFTPD 81 (83)
T ss_dssp HHHHCCTTC-EEEEEEETTEEEEEEEC
T ss_pred HcCCCCCCC-EEEEEEeeeEEEEEecC
Confidence 456777777 66 68999999988775
No 38
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=39.93 E-value=28 Score=16.62 Aligned_cols=12 Identities=33% Similarity=0.196 Sum_probs=9.2
Q ss_pred cceeeEEEEecC
Q psy1145 82 LVGSQFRIILNH 93 (138)
Q Consensus 82 ~~~SqF~Itl~~ 93 (138)
...|..||||.+
T Consensus 8 R~aSSvFITLap 19 (26)
T 2k9u_B 8 RVASSVFITLAP 19 (26)
T ss_dssp SCEEEEEEEECC
T ss_pred heeeeEEEEecC
Confidence 446778999986
No 39
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=32.24 E-value=31 Score=24.65 Aligned_cols=17 Identities=24% Similarity=0.569 Sum_probs=14.8
Q ss_pred eEEEEEEcCHHHHHHHh
Q psy1145 99 GIFGQVIYGLEYIDAIS 115 (138)
Q Consensus 99 ~vfG~Vv~G~~vl~~i~ 115 (138)
-+|++|++|+|-|.++-
T Consensus 150 N~F~TIveGle~la~~c 166 (188)
T 3kop_A 150 NVFATIVEGLDEMAAAC 166 (188)
T ss_dssp EEEEEEEESHHHHHHHH
T ss_pred cEEEEEecCHHHHHHHH
Confidence 58999999999887774
No 40
>3rd4_A Uncharacterized protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, propen_03304, unknown function; 2.90A {Proteus penneri}
Probab=26.94 E-value=28 Score=22.37 Aligned_cols=25 Identities=12% Similarity=0.100 Sum_probs=18.6
Q ss_pred hhHHHhcCCCCC-eeecCCEEEEEeCC
Q psy1145 4 NFELLTIGEFPG-LSYRNCALSQLWQF 29 (138)
Q Consensus 4 NF~~L~~g~~~g-~~Y~gt~f~ri~~~ 29 (138)
-|-.|+.|+ +| +.|+||.|....++
T Consensus 60 ~Y~~L~~Gd-~G~Lt~QGTRFi~F~~~ 85 (100)
T 3rd4_A 60 SYQNIEPEM-KGRLFMQGSRFVQFETD 85 (100)
T ss_dssp HHHTCCTTC-EEEEEEETTEEEEEEEC
T ss_pred HcCCCCCCC-EEEEEEeeeEEEEeecC
Confidence 355677777 66 67999999887664
No 41
>2dyq_A Amyloid beta A4 precursor protein-binding family 3; phosphotyrosine-interaction domain (PTB/PID alzheimer'S disease, structural genomics, NPPSFA; 3.10A {Homo sapiens}
Probab=25.96 E-value=74 Score=21.59 Aligned_cols=37 Identities=22% Similarity=0.219 Sum_probs=14.6
Q ss_pred cceeeEEEEecCCCCCC--eEEEEEE----cCHHHH-HHHhcCC
Q psy1145 82 LVGSQFRIILNHQKQFT--GIFGQVI----YGLEYI-DAISTYS 118 (138)
Q Consensus 82 ~~~SqF~Itl~~ld~~~--~vfG~Vv----~G~~vl-~~i~~~~ 118 (138)
+.||+|.=++...=..+ --.|-+- .||||| ++|+++.
T Consensus 2 ~~~~~~~~~~~~~~~~f~~kyLGsv~V~~~~G~dVln~Ai~~l~ 45 (144)
T 2dyq_A 2 SSGSSGLDAVSQAAQKYEALYMGTLPVTKAMGMDVLNEAIGTLT 45 (144)
T ss_dssp -------------CCCCEEEEEEEEEESSSCCHHHHHHHHHHHH
T ss_pred CCchhHHHHHHhhhhEEEEEEeccEEecCccCHHHHHHHHHHHH
Confidence 34667766666533333 2356554 499999 7777764
No 42
>2l0c_A Putative membrane protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Salmonella enterica subsp}
Probab=23.03 E-value=45 Score=21.17 Aligned_cols=25 Identities=28% Similarity=0.570 Sum_probs=18.6
Q ss_pred hhHHHhcCCCCC-eeecCCEEEEEeCC
Q psy1145 4 NFELLTIGEFPG-LSYRNCALSQLWQF 29 (138)
Q Consensus 4 NF~~L~~g~~~g-~~Y~gt~f~ri~~~ 29 (138)
.|-.|+.|+ +| +.|+||.|....++
T Consensus 59 ~Y~~L~eGD-~G~Lt~QGTRfl~Fer~ 84 (97)
T 2l0c_A 59 QYHALTVGD-QGTLSYKGTRFVGFVSR 84 (97)
T ss_dssp HHTTSCTTC-CEEEEEETTEEEEEECS
T ss_pred HCCCCCCCC-EEEEEEeeeeEEeeecC
Confidence 355677777 66 67999999887663
No 43
>1zx8_A Hypothetical protein TM1367; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: 1PE; 1.90A {Thermotoga maritima} SCOP: b.62.1.3 PDB: 2ka0_A
Probab=21.65 E-value=22 Score=24.08 Aligned_cols=17 Identities=29% Similarity=0.675 Sum_probs=13.5
Q ss_pred CeEEEEEEcCHHHHHHH
Q psy1145 98 TGIFGQVIYGLEYIDAI 114 (138)
Q Consensus 98 ~~vfG~Vv~G~~vl~~i 114 (138)
-.++|||.+|++.|..+
T Consensus 107 v~~lGrI~~~l~~l~~v 123 (136)
T 1zx8_A 107 VNVIGKIVEGLEDLKKI 123 (136)
T ss_dssp EEEEEEEEECGGGGGGC
T ss_pred cEEEEEEccCHHHHhhC
Confidence 37899999997776654
Done!