Query psy11450
Match_columns 350
No_of_seqs 133 out of 1103
Neff 6.9
Searched_HMMs 29240
Date Fri Aug 16 18:47:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11450.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11450hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2e0w_A Gamma-glutamyltranspept 100.0 8.3E-91 2.8E-95 711.4 29.8 329 6-347 176-523 (556)
2 2nlz_A Cephalosporin acylase; 100.0 4.5E-87 1.5E-91 682.6 32.8 309 10-347 182-503 (547)
3 2i3o_A Gamma-glutamyltransfera 100.0 1.2E-82 4E-87 646.6 23.4 301 6-347 162-480 (516)
4 2dg5_B Gamma-glutamyltranspept 100.0 4E-55 1.4E-59 392.1 18.8 156 191-347 1-157 (190)
5 2qmc_B GGT, gamma-glutamyltran 100.0 3.9E-55 1.3E-59 391.3 18.1 157 191-348 1-159 (188)
6 2v36_B Gamma-glutamyltranspept 100.0 6.2E-52 2.1E-56 371.4 14.7 144 191-345 1-144 (193)
7 3g9k_S Capsule biosynthesis pr 100.0 7.7E-50 2.6E-54 353.9 17.9 140 191-347 1-140 (177)
8 2v36_A Gamma-glutamyltranspept 100.0 2.8E-45 9.4E-50 359.4 14.0 185 8-206 175-375 (376)
9 2qmc_A GGT, gamma-glutamyltran 100.0 6.2E-39 2.1E-43 313.7 16.3 165 6-181 187-367 (377)
10 2dg5_A Gamma-glutamyltranspept 100.0 3.9E-38 1.3E-42 307.6 15.1 164 6-180 176-355 (366)
11 3g9k_L Capsule biosynthesis pr 100.0 1.4E-36 4.8E-41 291.1 11.8 146 6-169 154-314 (323)
12 4gdv_A L-asparaginase; NTN enz 83.6 6.9 0.00024 36.7 10.3 86 187-311 166-252 (310)
13 1p4k_A N(4)-(beta-N-acetylgluc 83.2 4.1 0.00014 38.0 8.5 86 187-311 148-234 (295)
14 3cuq_A Vacuolar-sorting protei 59.1 3.8 0.00013 37.0 1.9 30 46-76 70-103 (234)
15 1apy_B Aspartylglucosaminidase 56.8 9.9 0.00034 31.5 3.9 23 191-213 1-23 (141)
16 2gez_B L-asparaginase beta sub 56.2 11 0.00036 31.0 4.0 23 191-213 1-23 (133)
17 1k2x_B Putative L-asparaginase 56.0 11 0.00036 31.4 4.0 23 191-213 1-23 (143)
18 1u5t_A Appears to BE functiona 55.3 8.2 0.00028 34.8 3.4 54 23-77 50-123 (233)
19 3c17_A L-asparaginase precurso 51.5 14 0.00048 34.8 4.5 27 187-213 174-200 (320)
20 2a8j_A Taspase 1, threonine as 45.9 16 0.00056 35.6 4.1 26 188-213 231-256 (420)
21 1u5t_B Defective in vacuolar p 40.3 9.6 0.00033 32.5 1.3 15 47-62 11-25 (169)
22 3cuq_B Vacuolar protein-sortin 36.1 13 0.00044 33.0 1.5 28 46-74 71-102 (218)
23 2vqe_K 30S ribosomal protein S 30.8 34 0.0012 27.7 3.1 27 188-214 24-50 (129)
24 3bbn_K Ribosomal protein S11; 28.5 46 0.0016 27.4 3.6 27 188-214 37-63 (140)
25 2xvc_A ESCRT-III, SSO0910; cel 27.5 19 0.00064 25.2 0.8 21 55-75 13-33 (59)
26 3r8n_K 30S ribosomal protein S 22.8 37 0.0013 27.0 1.9 24 188-211 14-37 (117)
27 2v2f_A Penicillin binding prot 21.4 66 0.0023 18.0 2.3 17 264-280 5-21 (26)
No 1
>2e0w_A Gamma-glutamyltranspeptidase; NTN hydrolase, precursor, gamma-GTP, post-translational PROC maturation, transferase; 2.55A {Escherichia coli K12} SCOP: d.153.1.6
Probab=100.00 E-value=8.3e-91 Score=711.36 Aligned_cols=329 Identities=29% Similarity=0.447 Sum_probs=274.3
Q ss_pred CChhhhhccc-cCcCcccCCCCeeeChHHHHHHHHHHHhCCcCccccHHHHHHHHHHHHhCCCcCHhhhccCCceecCCe
Q psy11450 6 LFTFSRALFI-NEKNLTKVENDTYVWPALAKTFSIIAEEGGDALHNGSLTKAFVKDIQEAGGIITEADMNNYNVEIEEPI 84 (350)
Q Consensus 6 ~~p~~~~~f~-~~~g~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~pl 84 (350)
.+|+++++|+ ++ |+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++|+
T Consensus 176 ~~p~~~~~f~~~~-G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl 254 (556)
T 2e0w_A 176 PNHENSKAIFWKE-GEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPI 254 (556)
T ss_dssp TTSHHHHHHHEET-TEECCTTCEECCHHHHHHHHHHHHHCTHHHHHSHHHHHHHHHHHHSSCCCCHHHHHTCCCEEECCE
T ss_pred cCchHHHhccCCC-CccCCCCCEeeCHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHcCCCcCHHHHhhCCcceeCce
Confidence 4789999999 64 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCCeEEEcCCCCCcH-HHHHHHHHHHhccC----CCCChHHHHHHH-----------HHhCCCCcccccccccchH
Q psy11450 85 VAKLKGNHTLWTSPLPGSG-ILLSFMLEILQYLI----PAPSELLWHQRI-----------WVTGDTHPEAHNSYSSSIN 148 (350)
Q Consensus 85 ~~~~~~g~~v~~~ppPs~G-~~ll~~L~ile~~~----~~~~~~~~h~~~-----------~~lgDp~~~~~~~f~~~~~ 148 (350)
+++| +||+||++||||+| .+++++|||||+|+ ..++++++|+++ +|+||| + | +++
T Consensus 255 ~~~y-rg~~v~~~pPpssGG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp--~----f-~~v- 325 (556)
T 2e0w_A 255 SGDY-RGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDP--D----F-VKV- 325 (556)
T ss_dssp EEEE-TTEEEEECCTTBSSHHHHHHHHHHHHTSCSSSSCTTCHHHHHHHHHHHHHHHHHHGGGC--------------C-
T ss_pred EEEe-CCeEEEECCCCCcHHHHHHHHHHHHhcCCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCc--c----c-ccc-
Confidence 9999 99999999999887 67999999999998 356789999998 469999 8 8 665
Q ss_pred HHHHHhhcHHHHHHHHhhcCCCCCcccccccccCCC-CCCCCCceEEEEEeCCCCEEEEEeecCCCCCceeeeCCcceee
Q psy11450 149 QVVQQLQSQDFIQEIRSQISDNRTWQDIEHYNAKFV-PSEDHGTANIVVYSEAGDAVVATSTVNLVFGSRFVSPSTGILV 227 (350)
Q Consensus 149 ~~~~~lls~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~Tth~svvD~~GnaVs~t~Sl~~~FGSg~~~p~tGi~l 227 (350)
++++|||++|+++++++|+++++.+ +.+|.+... ..+.++||||||+|++||+||+|+|+|..||||+|+|+|||+|
T Consensus 326 -p~~~Lls~~ya~~~~~~I~~~~a~~-~~~~~~~~~~~~~~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~p~tGi~l 403 (556)
T 2e0w_A 326 -PWQALTNKAYAKSIADQIDINKAKP-SSEIRPGKLAPYESNQATHYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGILL 403 (556)
T ss_dssp -CGGGGGCHHHHHHHHHHCCSSCCCC-HHHHSCC--CCCCCSCCEEEEEECTTCCEEEEEEECSSTTTTSCBCGGGCCBC
T ss_pred -cHHHhcCHHHHHHHHHhcCccccCC-ccccCCCCCCCCCCCCCEEEEEEcCCCCEEEEeccCCCCcCCeEEcCCCceEe
Confidence 7889999999999999999887765 344443221 2245899999999999999999999999999999999999999
Q ss_pred cCCCCCCCC-CCCCCCCCCCCCCCCcCCCCCCCCCCCCcEEEEccCCcEEEEEeCCCchhHHHHHHHHHHHHHhcCCCHH
Q psy11450 228 NDQMDDFSS-PNITNYFHIPPSPANFIQPGKRPLSSMCPSIITDQDGNVKLAVGAAGGTKITTSIAQVIMMNLWSNNTLK 306 (350)
Q Consensus 228 Nn~m~~Fs~-~~~~~~f~l~~~~~N~i~PgkRP~st~~P~Iv~~~~g~~~l~~Ga~GG~~i~~a~~q~l~~~l~~g~~l~ 306 (350)
||+|+||+. |+.+|.||+.++++|+|+|||||+|||+|+||+ ++|+++|++|+|||++|+|+++|+|+|+++|||++|
T Consensus 404 NN~~~dFs~~pg~~n~~gl~~~~~N~i~PgKRP~ssm~Ptiv~-~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q 482 (556)
T 2e0w_A 404 NNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPTIVV-KDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGLNVA 482 (556)
T ss_dssp CCCC---------------------------CCCBCCCCEEEE-ETTEEEEEECCCSTTHHHHHHHHHHHHHHTSCCCHH
T ss_pred cCCCCCcCCCCCCCccccCCCCcccccCCCCCccccCCCeEEE-eCCcEEEEEECCChHHHHHHHHHHHHHHHhcCCCHH
Confidence 999999994 899999999999999999999999999999998 799999999999999999999999999999999999
Q ss_pred HHHhccccccccCCCeEEEccCCCHHHHHHHHhCCCeeEee
Q psy11450 307 ESVDAARIHHQLFPMKYGYEYGVLRSIIEGMERHEWFVRHQ 347 (350)
Q Consensus 307 ~Ai~aPR~~~~~~~~~v~~E~~~~~~~~~~L~~~Gh~v~~~ 347 (350)
|||++||||+++.++.+.+|+++++++++.|+++||+|...
T Consensus 483 ~Ai~aPR~~~~~~p~~~~~E~~~~~~~~~~L~~~Gh~v~~~ 523 (556)
T 2e0w_A 483 EATNAPRFHHQWLPDELRVEKGFSPDTLKLLEAKGQKVALK 523 (556)
T ss_dssp HHHHSCCEECCTTTTCEEECSCSCHHHHHHHHHTTCCEEEC
T ss_pred HHHhcCEEeecCCCCeEEECCCCCHHHHHHHHhCCCeeEEc
Confidence 99999999999888999999999999999999999998754
No 2
>2nlz_A Cephalosporin acylase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.70A {Bacillus halodurans} SCOP: d.153.1.6
Probab=100.00 E-value=4.5e-87 Score=682.64 Aligned_cols=309 Identities=22% Similarity=0.297 Sum_probs=285.2
Q ss_pred hhhccccCcCcccCCCCeeeChHHHHHHHHHHHhCCcCccccHHHHHHHHHHHHhCCCcCHhhhccCCceecCCeEEeec
Q psy11450 10 SRALFINEKNLTKVENDTYVWPALAKTFSIIAEEGGDALHNGSLTKAFVKDIQEAGGIITEADMNNYNVEIEEPIVAKLK 89 (350)
Q Consensus 10 ~~~~f~~~~g~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~~~ 89 (350)
++++|+++ |+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||+++|
T Consensus 182 ~~~~f~~~-G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~~~y- 259 (547)
T 2nlz_A 182 WFDTFAPK-GRAPRVGEVWRSQGHADTLRSIAESNGESFYRGELADQIHAFFDKHGGYLTKEDLACYRPEWVEPISIDY- 259 (547)
T ss_dssp HHHHHCTT-SSCCCTTCEECCHHHHHHHHHHHTTTTHHHHHSHHHHHHHHHHHHTTCCCCHHHHHTCCCEEECCEEEEE-
T ss_pred HHHHcccC-CccCCCCCEecCHHHHHHHHHHHHhCchhhcCCHHHHHHHHHHHhcCCCCCHHHHhhCCceeeCCeEEEe-
Confidence 89999985 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEcCCCCCcHHHHHHHHHHHhccCC--CCChHHHHHHH-----------HHhCCCCcccccccccchHHHHHHhhc
Q psy11450 90 GNHTLWTSPLPGSGILLSFMLEILQYLIP--APSELLWHQRI-----------WVTGDTHPEAHNSYSSSINQVVQQLQS 156 (350)
Q Consensus 90 ~g~~v~~~ppPs~G~~ll~~L~ile~~~~--~~~~~~~h~~~-----------~~lgDp~~~~~~~f~~~~~~~~~~lls 156 (350)
+||+||++||||||++++++|||||+|+. .++++++|+++ +++||| + | +++ ++++|||
T Consensus 260 rg~~v~~~pPps~G~~~l~~L~iLe~~~l~~~~s~~~~H~~~EA~k~A~adR~~~lgDp--~----f-~~v--p~~~Lls 330 (547)
T 2nlz_A 260 RGYRVWEIPPNGQGLVALEALNIVKGFEFYHKDTVDTYHKQIEAMKLAFVDGMKYVTEP--S----D-MSV--SVEQLLS 330 (547)
T ss_dssp TTEEEEECCTTBTTHHHHHHHHHHTTSCCSCSSSHHHHHHHHHHHHHHHHHHHHHCSSG--G----G-CSS--CHHHHTC
T ss_pred CCceEEECCCCcHHHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHhcCCc--c----c-ccc--cHHHhcC
Confidence 99999999999999999999999999983 57889999998 579999 8 8 766 7899999
Q ss_pred HHHHHHHHhhcCCCCCcccccccccCCCCCCCCCceEEEEEeCCCCEEEEEeecCCCCCceeeeCCcceeecCCCCCCCC
Q psy11450 157 QDFIQEIRSQISDNRTWQDIEHYNAKFVPSEDHGTANIVVYSEAGDAVVATSTVNLVFGSRFVSPSTGILVNDQMDDFSS 236 (350)
Q Consensus 157 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~Tth~svvD~~GnaVs~t~Sl~~~FGSg~~~p~tGi~lNn~m~~Fs~ 236 (350)
++|+++++++|+++ +.+ +.++. .+.++||||||+|++||+||+|+|+|..||||+++|+|||+|||+|++|+.
T Consensus 331 ~~ya~~~~~~I~~~-a~~-~~~~~-----p~~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~pgtGi~LNN~~~~Fs~ 403 (547)
T 2nlz_A 331 DEYATERRKEIGEQ-ALT-PEPGT-----PPRGGTVYLATADGDGNMVSFIQSNYMGFGSGVVVPGTGIAMQNRGHNFSL 403 (547)
T ss_dssp HHHHHHHHTTCCSS-CCC-CCCCC-----C----CEEEEEEETTSCEEEEEEECSSTTCSSCEETTTTEEBCCGGGGSBC
T ss_pred HHHHHHHHHhcccc-cCC-CCCCC-----CCCCCCEEEEEEcCCCCEEEEEccCCCccCCeeecCCceEEeeCCCCCCCC
Confidence 99999999999876 433 22211 246899999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCCCCCCCCCcCCCCCCCCCCCCcEEEEccCCcEEEEEeCCCchhHHHHHHHHHHHHHhcCCCHHHHHhcccccc
Q psy11450 237 PNITNYFHIPPSPANFIQPGKRPLSSMCPSIITDQDGNVKLAVGAAGGTKITTSIAQVIMMNLWSNNTLKESVDAARIHH 316 (350)
Q Consensus 237 ~~~~~~f~l~~~~~N~i~PgkRP~st~~P~Iv~~~~g~~~l~~Ga~GG~~i~~a~~q~l~~~l~~g~~l~~Ai~aPR~~~ 316 (350)
.|+++|+|+|||||+|||+|+||+ ++|+++|++|+|||++|||+++|+|+|+++|||++||||++||||+
T Consensus 404 ---------~p~~~N~i~PgKRP~ssm~Ptiv~-~~g~~~l~~Gs~GG~~i~~~~~qvl~n~ld~gm~~q~Ai~aPR~~~ 473 (547)
T 2nlz_A 404 ---------DPNHDNALKPGKRTYHTIIPGFLT-KNDQPIGPFGVMGGFMQPQGHMQVMMNTIDFGLNPQAALDAPRWQW 473 (547)
T ss_dssp ---------CTTSTTBCCTTCCCCBCCCCEEEE-ESSCEEEEEEECSGGGHHHHHHHHHHHHHTTCCCHHHHHHSCCEEE
T ss_pred ---------CCCCCCcCCCCCccccCCCCeEEE-eCCceEEEEECCchHHHHHHHHHHHHHHHhcCCCHHHHHhCCEeee
Confidence 567899999999999999999998 7999999999999999999999999999999999999999999999
Q ss_pred ccCCCeEEEccCCCHHHHHHHHhCCCeeEee
Q psy11450 317 QLFPMKYGYEYGVLRSIIEGMERHEWFVRHQ 347 (350)
Q Consensus 317 ~~~~~~v~~E~~~~~~~~~~L~~~Gh~v~~~ 347 (350)
+ .++.+.+|+++++++++.|+++||+|...
T Consensus 474 ~-~~~~~~~E~~~~~~~~~~L~~~Gh~v~~~ 503 (547)
T 2nlz_A 474 T-NGKQVQVEPTFPVDIAQALVRRGHKIQVV 503 (547)
T ss_dssp C-SSSEEEECTTSCHHHHHHHHHTTCEEEEC
T ss_pred c-CCCeEEecCCCCHHHHHHHHHCCCeeEec
Confidence 7 56799999999999999999999998764
No 3
>2i3o_A Gamma-glutamyltransferase related protein; structural genomics, PSI, protein structure initiative; 2.03A {Thermoplasma acidophilum} SCOP: d.153.1.6
Probab=100.00 E-value=1.2e-82 Score=646.63 Aligned_cols=301 Identities=17% Similarity=0.246 Sum_probs=267.0
Q ss_pred CChhhhhccccCcCcccCCCCeeeChHHHHHHHHHHHhCCcCccccHHHHHHHHHHHHhCCCcCHhhhccCCceecCCeE
Q psy11450 6 LFTFSRALFINEKNLTKVENDTYVWPALAKTFSIIAEEGGDALHNGSLTKAFVKDIQEAGGIITEADMNNYNVEIEEPIV 85 (350)
Q Consensus 6 ~~p~~~~~f~~~~g~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~pl~ 85 (350)
.+|+++++|+++ |+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++|++
T Consensus 162 ~~~~~~~~f~~~-G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~ 240 (516)
T 2i3o_A 162 QYRGWSSIFMPN-GSVPVAGEILKQPDLAESFRLMSEEGFRSFYDGSLADIIIAGLEGTGSPLSDRDLRVYRPLIGKPVF 240 (516)
T ss_dssp TCHHHHHHHSTT-SSCCCTTCEECCHHHHHHHHHHHHHCTTHHHHSHHHHHHHHTTTTTCCCCCHHHHHHCCCEEECCEE
T ss_pred cChhHHhhhccC-CccCCCCCEecCHHHHHHHHHHHhhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCceE
Confidence 478999999985 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCeEEEcCCCCCcHHHHHHHHHHHhccCC---CCChHHHHHHH----------HHhCCCCcccccccccchHHHHH
Q psy11450 86 AKLKGNHTLWTSPLPGSGILLSFMLEILQYLIP---APSELLWHQRI----------WVTGDTHPEAHNSYSSSINQVVQ 152 (350)
Q Consensus 86 ~~~~~g~~v~~~ppPs~G~~ll~~L~ile~~~~---~~~~~~~h~~~----------~~lgDp~~~~~~~f~~~~~~~~~ 152 (350)
++| +||+||++||||||.+++++|||||+|+. .++++++|+++ .++||| + | +++ +++
T Consensus 241 ~~y-rg~~v~~~pPps~G~~~l~~L~iLe~~~~~~~~~~~~~~H~~~EA~k~A~adR~~lgDp--~----f-~~v--p~~ 310 (516)
T 2i3o_A 241 TDL-DEFRIYETSPNSQGITVIEWIRGMESHGYDSRTMWEAKIEDIFETMEEAYDKRRKITDP--S----Y-MNI--AQH 310 (516)
T ss_dssp EEE-TTEEEEECCTTBTTHHHHHHHHHHHHTTCCTTTGGGCCHHHHHHHHHHHHHHHTTCCCG--G----G-TC------
T ss_pred EEe-CCeEEEECCCCcHHHHHHHHHHhhhcCCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCc--c----c-ccc--chH
Confidence 999 99999999999999999999999999982 45788999998 368999 8 8 765 677
Q ss_pred HhhcHHHHHHHHhhcCCCCCcccccccccCCCCCCCCCceEEEEEeCCCCEEEEEeecCCCCCceeeeCCcceeecCCCC
Q psy11450 153 QLQSQDFIQEIRSQISDNRTWQDIEHYNAKFVPSEDHGTANIVVYSEAGDAVVATSTVNLVFGSRFVSPSTGILVNDQMD 232 (350)
Q Consensus 153 ~lls~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~Tth~svvD~~GnaVs~t~Sl~~~FGSg~~~p~tGi~lNn~m~ 232 (350)
+| +|+++. ++.+ +. ..+.++||||||+|++||+||+|+|+|..||||+|+|+|||+|||+|+
T Consensus 311 ~L---~y~~~~-------~a~~-~~-------~~~~~~Tth~svvD~~GnaVS~t~Si~~~FGSgv~~p~tGi~lnN~~~ 372 (516)
T 2i3o_A 311 DS---ANGKKD-------GLPK-RD-------HNDIGDTTYFSISDSEGRSVSIIQSNYMGFGSGIVPKGTGFVLQNRGS 372 (516)
T ss_dssp ------------------CCCB-CC-------SCCCCEEEEEEEEETTSCEEEEEEEEESTTCSSCCCTTSCCCCCCGGG
T ss_pred HH---HHHHhc-------cccC-CC-------CCCCCCCEEEEEEcCCCCEEEEeccCCCCcCCeeeeCCCceEEeCCCC
Confidence 77 787761 2222 11 114588999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCcEEEEccCCcEEEEEeCCCchhHHHHHHHHHHHHHhcCCCHHHHHhcc
Q psy11450 233 DFSSPNITNYFHIPPSPANFIQPGKRPLSSMCPSIITDQDGNVKLAVGAAGGTKITTSIAQVIMMNLWSNNTLKESVDAA 312 (350)
Q Consensus 233 ~Fs~~~~~~~f~l~~~~~N~i~PgkRP~st~~P~Iv~~~~g~~~l~~Ga~GG~~i~~a~~q~l~~~l~~g~~l~~Ai~aP 312 (350)
||+. .|+++|+++|||||+|||+|+||+ ++|+++|++|+|||++|+|+++|+|+|+++|||++||||++|
T Consensus 373 ~Fs~---------~p~~~N~i~PgKRP~ssm~Ptiv~-~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aP 442 (516)
T 2i3o_A 373 YFTL---------QRDHPNALMPGKRTFHTLAACMVE-KEHDLYASLGSMGGDIQPQVQMQILMEILKDNTDPQAILDKP 442 (516)
T ss_dssp GSBC---------CTTSTTBCCTTCCCCBCCCCEEEE-ETTEEEEEEEECCSTTHHHHHHHHHHHHTTCCSCHHHHHHSC
T ss_pred ccCC---------CCCCCCcCCCCCCcccCCCCeEEE-eCCceEEEEECCCcHHHHHHHHHHHHHHHhcCCCHHHHHhCC
Confidence 9864 567899999999999999999998 799999999999999999999999999999999999999999
Q ss_pred cccc----ccCCCeEEEcc-CCCHHHHHHHHhCCCeeEee
Q psy11450 313 RIHH----QLFPMKYGYEY-GVLRSIIEGMERHEWFVRHQ 347 (350)
Q Consensus 313 R~~~----~~~~~~v~~E~-~~~~~~~~~L~~~Gh~v~~~ 347 (350)
|||+ ++.++.+.+|+ ++++++++.| +||+|...
T Consensus 443 R~~~~~~~~~~~~~~~~E~~~~~~~~~~~L--~Gh~v~~~ 480 (516)
T 2i3o_A 443 RWTEPYTIYEAPGAVYVESEELYRNVSKQI--SGRKVVLR 480 (516)
T ss_dssp CEECCCCTTSBCCCEEESSHHHHHHHHHHS--CSCCEEEC
T ss_pred EEeeccccCCCCCeEEEecCCCCHHHHHHh--CCCEEEec
Confidence 9998 55688999999 9999999999 99998754
No 4
>2dg5_B Gamma-glutamyltranspeptidase; gamma-glutamyltransferase, GGT, gamma-GT, glutathione; HET: GLU; 1.60A {Escherichia coli K12} SCOP: d.153.1.6 PDB: 2dbu_B 2dbw_B* 2dbx_B* 2e0x_B 2e0y_B 2z8i_B* 2z8j_B* 2z8k_B*
Probab=100.00 E-value=4e-55 Score=392.06 Aligned_cols=156 Identities=35% Similarity=0.569 Sum_probs=152.2
Q ss_pred ceEEEEEeCCCCEEEEEeecCCCCCceeeeCCcceeecCCCCCCCC-CCCCCCCCCCCCCCCcCCCCCCCCCCCCcEEEE
Q psy11450 191 TANIVVYSEAGDAVVATSTVNLVFGSRFVSPSTGILVNDQMDDFSS-PNITNYFHIPPSPANFIQPGKRPLSSMCPSIIT 269 (350)
Q Consensus 191 Tth~svvD~~GnaVs~t~Sl~~~FGSg~~~p~tGi~lNn~m~~Fs~-~~~~~~f~l~~~~~N~i~PgkRP~st~~P~Iv~ 269 (350)
||||||+|++||+||+|+|+|..||||+++|+|||+|||+|+||+. |+.+|.|++.++++|+++|||||+|||||+||+
T Consensus 1 Tth~svvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~LNN~m~dFs~~pg~~n~~g~~~~~~N~i~PgKRP~ssm~Ptiv~ 80 (190)
T 2dg5_B 1 TTHYSVVDKDGNAVAVTYTLNTTFGTGIVAGESGILLNNQMDDFSAKPGVPNVYGLVGGDANAVGPNKRPLSSMSPTIVV 80 (190)
T ss_dssp CEEEEEECTTSCEEEEEEECSSTTTTCEECGGGCCEECCGGGGSBSSTTCCCTTSCCCCSTTBCCTTCCCCBCCCCEEEE
T ss_pred CeEEEEECCCCCEEEEEecCCCCcCCeeEcCCccEEEeCCCCcccCCCCCcCCcCCCCCCccccCCCCcccccCCCEEEe
Confidence 8999999999999999999999999999999999999999999998 899999999999999999999999999999998
Q ss_pred ccCCcEEEEEeCCCchhHHHHHHHHHHHHHhcCCCHHHHHhccccccccCCCeEEEccCCCHHHHHHHHhCCCeeEee
Q psy11450 270 DQDGNVKLAVGAAGGTKITTSIAQVIMMNLWSNNTLKESVDAARIHHQLFPMKYGYEYGVLRSIIEGMERHEWFVRHQ 347 (350)
Q Consensus 270 ~~~g~~~l~~Ga~GG~~i~~a~~q~l~~~l~~g~~l~~Ai~aPR~~~~~~~~~v~~E~~~~~~~~~~L~~~Gh~v~~~ 347 (350)
++|+++|++|++||++|+|+++|+|+|+++|||++||||++||||+++.++.+.+|+++++++++.|+++||+|...
T Consensus 81 -~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~~~~~~~~~~E~~~~~~~~~~L~~~Gh~v~~~ 157 (190)
T 2dg5_B 81 -KDGKTWLVTGSPGGSRIITTVLQMVVNSIDYGLNVAEATNAPRFHHQWLPDELRVEKGFSPDTLKLLEAKGQKVALK 157 (190)
T ss_dssp -ETTEEEEEECCCCGGGHHHHHHHHHHHHHTSCCCHHHHHHSCCEECCSSSCCEEECTTSCHHHHHHHHHTTCCEEEC
T ss_pred -cCCcEEEEEECCCcchHHHHHHHHHHHHHccCCCHHHHhhCCEEeeccCCCeEEecCCCCHHHHHHHHhCCcEeEEe
Confidence 79999999999999999999999999999999999999999999999889999999999999999999999998754
No 5
>2qmc_B GGT, gamma-glutamyltranspeptidase; NTN-hydrolase, transferase; HET: GTB; 1.55A {Helicobacter pylori} PDB: 2qm6_B* 2nqo_B* 3fnm_B*
Probab=100.00 E-value=3.9e-55 Score=391.29 Aligned_cols=157 Identities=33% Similarity=0.498 Sum_probs=152.3
Q ss_pred ceEEEEEeCCCCEEEEEeecCCCCCceeeeCCcceeecCCCCCCCC-CCCCCCCCCCCCCCCcCCCCCCCCCCCCcEEEE
Q psy11450 191 TANIVVYSEAGDAVVATSTVNLVFGSRFVSPSTGILVNDQMDDFSS-PNITNYFHIPPSPANFIQPGKRPLSSMCPSIIT 269 (350)
Q Consensus 191 Tth~svvD~~GnaVs~t~Sl~~~FGSg~~~p~tGi~lNn~m~~Fs~-~~~~~~f~l~~~~~N~i~PgkRP~st~~P~Iv~ 269 (350)
||||||+|++||+||+|+|+|..||||+++|+|||+|||+|+||+. |+.+|.||+.++++|+++|||||+|||||+||+
T Consensus 1 Tth~svvD~~GnaVS~T~Si~~~FGSgv~~p~tGi~LNN~m~dFs~~pg~~n~~g~~~~~~N~i~PgKRP~ssm~Ptiv~ 80 (188)
T 2qmc_B 1 ATHYSVADRWGNAVSVTYTINASYGSAASIDGAGFLLNNEMDDFSIKPGNPNLYGLVGGDANAIEANKRPLSSMSPTIVL 80 (188)
T ss_dssp CEEEEEEETTSCEEEEEEECSSTTTTSCBCTTTCCBCCCGGGGSBSSTTCCCTTSCCCCSTTBCCTTCCCCBCCCCEEEE
T ss_pred CeEEEEECCCCCEEEEEecCCCCccCeeEcCCCceEEcCCCCCcccCCCCccccCCCCCcccccCCCCccccCCCCEEEE
Confidence 8999999999999999999999999999999999999999999994 999999999999999999999999999999998
Q ss_pred ccCCcEEEEEeCCCchhHHHHHHHHHHHHHhcCCCHHHHHhccccccccCCCeEEEcc-CCCHHHHHHHHhCCCeeEeec
Q psy11450 270 DQDGNVKLAVGAAGGTKITTSIAQVIMMNLWSNNTLKESVDAARIHHQLFPMKYGYEY-GVLRSIIEGMERHEWFVRHQY 348 (350)
Q Consensus 270 ~~~g~~~l~~Ga~GG~~i~~a~~q~l~~~l~~g~~l~~Ai~aPR~~~~~~~~~v~~E~-~~~~~~~~~L~~~Gh~v~~~~ 348 (350)
++|+++|++|+|||++|+|+++|+|+|+++|||++||||++||||+++.++.+.+|+ +++++++++|+++||+|....
T Consensus 81 -~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~h~~~~p~~~~~E~~~~~~~~~~~L~~~Gh~v~~~~ 159 (188)
T 2qmc_B 81 -KNNKVFLVVGSPGGSRIITTVLQVISNVIDYNMNISEAVSAPRFHMQWLPDELRIEKFGMPADVKDNLTKMGYQIVTKP 159 (188)
T ss_dssp -ETTEEEEEECCCCGGGHHHHHHHHHHHHHHHCCCHHHHHHSCCCBCCSSSCCEEECTTSSCHHHHHHHHHHTCCEEECS
T ss_pred -eCCcEEEEEECCCcchHHHHHHHHHHHHHccCCCHHHHhhCCEEeeccCCCeEEEecCCCCHHHHHHHHHCCCeeEEcc
Confidence 799999999999999999999999999999999999999999999998899999999 999999999999999997643
No 6
>2v36_B Gamma-glutamyltranspeptidase small chain; transferase, glutathione biosynthesis, gamma-glutamyl transferase, acyltransferase, zymogen; 1.85A {Bacillus subtilis} PDB: 3a75_B*
Probab=100.00 E-value=6.2e-52 Score=371.43 Aligned_cols=144 Identities=33% Similarity=0.545 Sum_probs=129.0
Q ss_pred ceEEEEEeCCCCEEEEEeecCCCCCceeeeCCcceeecCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCcEEEEc
Q psy11450 191 TANIVVYSEAGDAVVATSTVNLVFGSRFVSPSTGILVNDQMDDFSSPNITNYFHIPPSPANFIQPGKRPLSSMCPSIITD 270 (350)
Q Consensus 191 Tth~svvD~~GnaVs~t~Sl~~~FGSg~~~p~tGi~lNn~m~~Fs~~~~~~~f~l~~~~~N~i~PgkRP~st~~P~Iv~~ 270 (350)
||||||+|++||+||+|+|+|..||||+++|+|||+|||+|+||+. .|+++|+++|||||+|||||+||+
T Consensus 1 Tth~sVvD~~GnaVS~T~Si~~~FGSgv~~p~tG~~LNN~m~dFs~---------~pg~~N~i~PGKRP~ssm~Ptiv~- 70 (193)
T 2v36_B 1 TTHFTVADRWGNVVSYTTTIEQLFGTGIMVPDYGVILNNELTDFDA---------IPGGANEVQPNKRPLSSMTPTILF- 70 (193)
T ss_dssp CEEEEEEETTSCEEEEEEECSSTTTTSCBCTTTCCBCCCGGGGSBS---------SSSSTTBCCTTCCCCBCCCCEEEE-
T ss_pred CeEEEEECCCCCEEEEEecCCCCcCCeeEcCCCceeECCCCCCccC---------CCCCCCccCCCCcccccCCCEEEE-
Confidence 8999999999999999999999999999999999999999999974 345889999999999999999998
Q ss_pred cCCcEEEEEeCCCchhHHHHHHHHHHHHHhcCCCHHHHHhccccccccCCCeEEEccCCCHHHHHHHHhCCCeeE
Q psy11450 271 QDGNVKLAVGAAGGTKITTSIAQVIMMNLWSNNTLKESVDAARIHHQLFPMKYGYEYGVLRSIIEGMERHEWFVR 345 (350)
Q Consensus 271 ~~g~~~l~~Ga~GG~~i~~a~~q~l~~~l~~g~~l~~Ai~aPR~~~~~~~~~v~~E~~~~~~~~~~L~~~Gh~v~ 345 (350)
++|+++|++|+|||++|+|+++|+|+|+++|||++||||++||||+++ ++.+.+|++++++++++|+++||+|.
T Consensus 71 ~~g~~~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~~~-p~~v~~E~~~~~~~~~~L~~~Gh~v~ 144 (193)
T 2v36_B 71 KDDKPVLTVGSPGGATIISSVLQTILYHIEYGMELKAAVEEPRIYTNS-MSSYRYEDGVPKDVLSKLNGMGHKFG 144 (193)
T ss_dssp ETTEEEEEEECCCGGGHHHHHHHHHHHHHTSCCCHHHHHHSCCEEEEE-TTEEEECTTSCC----------CCCC
T ss_pred eCCCEEEEEECCCcchhHHHHHHHHHHHHccCCCHHHHhhCCEeeecC-CCeeEecCCCCHHHHHHHHhcCCeee
Confidence 799999999999999999999999999999999999999999999997 89999999999999999999999986
No 7
>3g9k_S Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_S*
Probab=100.00 E-value=7.7e-50 Score=353.89 Aligned_cols=140 Identities=21% Similarity=0.434 Sum_probs=126.0
Q ss_pred ceEEEEEeCCCCEEEEEeecCCCCCceeeeCCcceeecCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCcEEEEc
Q psy11450 191 TANIVVYSEAGDAVVATSTVNLVFGSRFVSPSTGILVNDQMDDFSSPNITNYFHIPPSPANFIQPGKRPLSSMCPSIITD 270 (350)
Q Consensus 191 Tth~svvD~~GnaVs~t~Sl~~~FGSg~~~p~tGi~lNn~m~~Fs~~~~~~~f~l~~~~~N~i~PgkRP~st~~P~Iv~~ 270 (350)
||||+|+|++||+||+|+|+|..||||+++ |||+|||+|+||+ | +++|+++|||||+|||+|+||+
T Consensus 1 Tth~svvD~~GnaVS~T~Si~~~FGSgv~~--tGi~LNN~m~dFs-p----------~~~N~i~PgKRP~ssm~Ptiv~- 66 (177)
T 3g9k_S 1 TTHFVIIDRDGTVVSSTNTLSNFFGTGKYT--AGFFLNNQLQNFG-S----------EGFNSYEPGKRSRTFMAPTVLK- 66 (177)
T ss_dssp CEEEEEECTTCCEEEEEEECSSTTTTSCEE--TTEECCCCCCC---------------------CCCCCCCCCCCEEEE-
T ss_pred CeEEEEECCCCCEEEEEccCCCCCCcceEe--cceEEcCcccccC-C----------CCCcccCCCCccccCCCCEEEE-
Confidence 899999999999999999999999999999 9999999999997 3 4789999999999999999998
Q ss_pred cCCcEEEEEeCCCchhHHHHHHHHHHHHHhcCCCHHHHHhccccccccCCCeEEEccCCCHHHHHHHHhCCCeeEee
Q psy11450 271 QDGNVKLAVGAAGGTKITTSIAQVIMMNLWSNNTLKESVDAARIHHQLFPMKYGYEYGVLRSIIEGMERHEWFVRHQ 347 (350)
Q Consensus 271 ~~g~~~l~~Ga~GG~~i~~a~~q~l~~~l~~g~~l~~Ai~aPR~~~~~~~~~v~~E~~~~~~~~~~L~~~Gh~v~~~ 347 (350)
++|+ +|++|+|||++|+|+++|+++|+++|||++||||++||||+. ++.+.+|++++++++++|+++||+|...
T Consensus 67 ~~g~-~l~~Gs~GG~~i~~~~~q~l~n~ld~gm~~q~Ai~aPR~~~~--~~~~~~E~~~~~~~~~~L~~~Gh~v~~~ 140 (177)
T 3g9k_S 67 KDGE-TIGIGSPGGNRIPQILTPILDKYTHGKGSLQDIINEYRFTFE--KNTAYTEIQLSSEVKNELSRKGLNVKKK 140 (177)
T ss_dssp ETTE-EEEEECCCGGGHHHHHHHHHHHHHTTCSCHHHHHHSCCEEEE--TTEEEESSCCCHHHHHHHHTTTCEEEEC
T ss_pred cCCc-EEEEECCCHHHHHHHHHHHHHHHHhCCCCHHHHHhCCeeecC--CCeEEEcCCCCHHHHHHHHHcCCeeEEC
Confidence 6888 999999999999999999999999999999999999999984 8999999999999999999999998754
No 8
>2v36_A Gamma-glutamyltranspeptidase large chain; transferase, glutathione biosynthesis, gamma-glutamyl transferase, acyltransferase, zymogen; 1.85A {Bacillus subtilis} PDB: 3a75_A*
Probab=100.00 E-value=2.8e-45 Score=359.42 Aligned_cols=185 Identities=29% Similarity=0.383 Sum_probs=157.5
Q ss_pred hhhhhccccCcCcccCCCCeeeChHHHHHHHHHHHhCCcCccccHHHHHHHHHHHHhCCCcCHhhhccCCceecCCeEEe
Q psy11450 8 TFSRALFINEKNLTKVENDTYVWPALAKTFSIIAEEGGDALHNGSLTKAFVKDIQEAGGIITEADMNNYNVEIEEPIVAK 87 (350)
Q Consensus 8 p~~~~~f~~~~g~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~pl~~~ 87 (350)
|+++++|+++ |+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||+++
T Consensus 175 ~~~~~~f~~~-G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~~~ 253 (376)
T 2v36_A 175 TAAKDVFLPN-GEPLKEGDTLIQKDLAKTFKLIRSKGTDAFYKGKFAKTLSDTVQDFGGSMTEKDLENYDITIDEPIWGD 253 (376)
T ss_dssp STTHHHHSTT-SSCCCTTCEECCHHHHHHHHHHHHHCTHHHHSHHHHHHHHHHHHHTTCCCCHHHHHHCCCEEECCEEEE
T ss_pred hhHHHHhccC-CccCCCCCEEECHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCceEEE
Confidence 7889999985 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCeEEEcCCCCCcH-HHHHHHHHHHhccC----CCCChHHHHHHH-----------HHhCCCCcccccccccchHHHH
Q psy11450 88 LKGNHTLWTSPLPGSG-ILLSFMLEILQYLI----PAPSELLWHQRI-----------WVTGDTHPEAHNSYSSSINQVV 151 (350)
Q Consensus 88 ~~~g~~v~~~ppPs~G-~~ll~~L~ile~~~----~~~~~~~~h~~~-----------~~lgDp~~~~~~~f~~~~~~~~ 151 (350)
| +||+||++||||+| .+++++|||||+|+ ..++++++|+++ +|+||| + | +++ ++
T Consensus 254 y-rg~~v~~~pPPssGG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp--~----f-~~v--p~ 323 (376)
T 2v36_A 254 Y-QGYQIATTPPPSSGGIFLLQMPKILDHFNLSQYDVRSWEKYQLLAETMHLSYADRASYAGDP--E----F-VNV--PL 323 (376)
T ss_dssp E-TTEEEEECCTTBSHHHHHHHHHHHHHTTCCC--CTTCHHHHHHHHHHHHHHHHHHHHHCSCT--T----T-SCC--CH
T ss_pred e-CCeEEEECCCCCcHHHHHHHHHHHHhcCCccccCCCcHHHHHHHHHHHHHHHHHHHHhcCCc--c----c-ccC--CH
Confidence 9 99999999999986 78999999999998 356889999998 579999 8 8 766 78
Q ss_pred HHhhcHHHHHHHHhhcCCCCCcccccccccCCCCCCCCCceEEEEEeCCCCEEEE
Q psy11450 152 QQLQSQDFIQEIRSQISDNRTWQDIEHYNAKFVPSEDHGTANIVVYSEAGDAVVA 206 (350)
Q Consensus 152 ~~lls~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~Tth~svvD~~GnaVs~ 206 (350)
++|||++|+++++++|++ +.+ +.+|.+.......++||||||+|++||+||.
T Consensus 324 ~~Lls~~y~~~~~~~I~~--~~~-~~~~~~~~~~~~~~~Tth~svvD~~GnaVS~ 375 (376)
T 2v36_A 324 KGLLHPDYIKERQQLINL--DQV-NKKPKAGDPWKYQEGSANYKQVEQPKDKVEG 375 (376)
T ss_dssp HHHHCHHHHHHHHHTCBT--TBC-CSSCCCCCGGGGSSSCCSSCCCCC-------
T ss_pred HHhcCHHHHHHHHHhccc--ccc-ccccCCCCCCCCCCCCEEEEEEcCCCCeEeC
Confidence 999999999999999987 222 2233332111123899999999999999985
No 9
>2qmc_A GGT, gamma-glutamyltranspeptidase; NTN-hydrolase, transferase; HET: GTB; 1.55A {Helicobacter pylori} PDB: 2qm6_A* 3fnm_A* 2nqo_A
Probab=100.00 E-value=6.2e-39 Score=313.68 Aligned_cols=165 Identities=24% Similarity=0.375 Sum_probs=151.2
Q ss_pred CChhhhhccccCcCcccCCCCeeeChHHHHHHHHHHHhCCcCccccHHHHHHHHHHHHhCCCcCHhhhccCCceecCCeE
Q psy11450 6 LFTFSRALFINEKNLTKVENDTYVWPALAKTFSIIAEEGGDALHNGSLTKAFVKDIQEAGGIITEADMNNYNVEIEEPIV 85 (350)
Q Consensus 6 ~~p~~~~~f~~~~g~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~pl~ 85 (350)
.+|+++++|++++|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||+
T Consensus 187 ~~p~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~ 266 (377)
T 2qmc_A 187 KYSSSKKYFFKKGHLDYQEGDLFVQKDLAKTLNQIKTLGAKGFYQGQVAELIEKDMKKNGGIITKEDLASYNVKWRKPVV 266 (377)
T ss_dssp TCHHHHHHHEETTTEECCTTCEECCHHHHHHHHHHHHHTTHHHHSHHHHHHHHHHHHHTTCCCCHHHHHTCCCEEECCEE
T ss_pred cChhHHhhccCCCCccCCCCCEeeCHHHHHHHHHHHHhCcHhhhCCHHHHHHHHHHHHcCCCCCHHHHhhCCcceeCCeE
Confidence 47899999997349999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCeEEEcCCCCCcH-HHHHHHHHHHhccC----CCCChHHHHHHH-----------HHhCCCCcccccccccchHH
Q psy11450 86 AKLKGNHTLWTSPLPGSG-ILLSFMLEILQYLI----PAPSELLWHQRI-----------WVTGDTHPEAHNSYSSSINQ 149 (350)
Q Consensus 86 ~~~~~g~~v~~~ppPs~G-~~ll~~L~ile~~~----~~~~~~~~h~~~-----------~~lgDp~~~~~~~f~~~~~~ 149 (350)
++| +||+||++|||||| .+++++|||||+|+ ..++++++|+++ +|+||| + | +++
T Consensus 267 ~~y-rg~~v~~~pPPssGG~~~l~~L~iLe~~~l~~~~~~s~~~~H~~~EA~k~AfadR~~~lgDP--~----f-~~v-- 336 (377)
T 2qmc_A 267 GSY-RGYKIISMSPPSSGGTHLIQILNVMENADLSALGYGASKNIHIAAEAMRQAYADRSVYMGDA--D----F-VSV-- 336 (377)
T ss_dssp EEE-TTEEEEECCTTBSHHHHHHHHHHHHTTSCHHHHCTTCHHHHHHHHHHHHHHHHHHHHHCSCT--T----T-SCC--
T ss_pred EEe-CCeEEEeCCCCCchHHHHHHHHHHHhcCCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCc--c----c-ccc--
Confidence 999 99999999999988 67999999999998 467899999998 579999 8 8 766
Q ss_pred HHHHhhcHHHHHHHHhhcCCCCCccccccccc
Q psy11450 150 VVQQLQSQDFIQEIRSQISDNRTWQDIEHYNA 181 (350)
Q Consensus 150 ~~~~lls~~~~~~~~~~i~~~~~~~~~~~~~~ 181 (350)
++++|||++|+++++++|+++++.+ ..+|.+
T Consensus 337 p~~~LLs~~ya~~~~~~I~~~~a~~-~~~~~~ 367 (377)
T 2qmc_A 337 PVDKLINKAYAKKIFDTIQPDTVTP-SSQIKP 367 (377)
T ss_dssp CHHHHTCHHHHHHHHHTCBTTBCCC-GGGCCG
T ss_pred cHHHhCCHHHHHHHHHhCCcccCCC-hhhcCC
Confidence 7899999999999999999887765 344543
No 10
>2dg5_A Gamma-glutamyltranspeptidase; gamma-glutamyltransferase, GGT, gamma-GT, glutathione; HET: GLU; 1.60A {Escherichia coli K12} SCOP: d.153.1.6 PDB: 2dbu_A 2dbw_A* 2dbx_A* 2e0x_A 2e0y_A 2z8i_A* 2z8j_A* 2z8k_A*
Probab=100.00 E-value=3.9e-38 Score=307.56 Aligned_cols=164 Identities=23% Similarity=0.329 Sum_probs=148.5
Q ss_pred CChhhhhccccCcCcccCCCCeeeChHHHHHHHHHHHhCCcCccccHHHHHHHHHHHHhCCCcCHhhhccCCceecCCeE
Q psy11450 6 LFTFSRALFINEKNLTKVENDTYVWPALAKTFSIIAEEGGDALHNGSLTKAFVKDIQEAGGIITEADMNNYNVEIEEPIV 85 (350)
Q Consensus 6 ~~p~~~~~f~~~~g~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~pl~ 85 (350)
.+|..+++|+..+|+++++||+++||+||+|||+||++|+++||+|+||++|+++++++||+||++||++|+++|++||+
T Consensus 176 ~~~~~~~~f~~~~G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DLa~y~~~~~~Pl~ 255 (366)
T 2dg5_A 176 PNHENSKAIFWKEGEPLKKGDTLVQANLAKSLEMIAENGPDEFYKGTIAEQIAQEMQKNGGLITKEDLAAYKAVERTPIS 255 (366)
T ss_dssp GGSHHHHHHHEETTEECCTTCEECCHHHHHHHHHHHHHCTHHHHTSHHHHHHHHHHHHTTCCCCHHHHHHCCCEEECCEE
T ss_pred cCchHHHHhcCCCCeECCCCCEeeCHHHHHHHHHHHHhCchhccCCHHHHHHHHHHHHcCCCCCHHHHhhCCCceeCCeE
Confidence 35778889973349999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeecCCeEEEcCCCCC-cHHHHHHHHHHHhccC----CCCChHHHHHHH-----------HHhCCCCcccccccccchHH
Q psy11450 86 AKLKGNHTLWTSPLPG-SGILLSFMLEILQYLI----PAPSELLWHQRI-----------WVTGDTHPEAHNSYSSSINQ 149 (350)
Q Consensus 86 ~~~~~g~~v~~~ppPs-~G~~ll~~L~ile~~~----~~~~~~~~h~~~-----------~~lgDp~~~~~~~f~~~~~~ 149 (350)
++| +||+||++|||| +|.+++++|||||+|+ ..++++++|+++ +|+||| + | +++
T Consensus 256 ~~y-rg~~v~~~pPpssgG~~~l~~L~iLe~~~~~~~~~~s~~~~H~~~EA~k~A~adR~~~lgDp--~----f-~~v-- 325 (366)
T 2dg5_A 256 GDY-RGYQVYSMPPPSSGGIHIVQILNILENFDMKKYGFGSADAMQIMAEAEKYAYADRSEYLGDP--D----F-VKV-- 325 (366)
T ss_dssp EEE-TTEEEEECCTTBSHHHHHHHHHHHHTTSCHHHHCTTCHHHHHHHHHHHHHHHHHHHHHCSCT--T----T-SCC--
T ss_pred EEe-CCeEEEECCCCchHHHHHHHHHHhccccCccccCCchHHHHHHHHHHHHHHHHHHHHhcCCc--c----c-ccc--
Confidence 999 999999999998 5788999999999998 467899999998 579999 8 8 766
Q ss_pred HHHHhhcHHHHHHHHhhcCCCCCcccccccc
Q psy11450 150 VVQQLQSQDFIQEIRSQISDNRTWQDIEHYN 180 (350)
Q Consensus 150 ~~~~lls~~~~~~~~~~i~~~~~~~~~~~~~ 180 (350)
++++|||++|+++++++|+++++.+ +.+|.
T Consensus 326 p~~~Lls~~ya~~~~~~I~~~~~~~-~~~~~ 355 (366)
T 2dg5_A 326 PWQALTNKAYAKSIADQIDINKAKP-SSEIR 355 (366)
T ss_dssp CHHHHTCHHHHHHHHTTCBTTBCCC-GGGCC
T ss_pred hHHHhCCHHHHHHHHHhcCcccCCC-hhhcC
Confidence 7899999999999999999877655 34443
No 11
>3g9k_L Capsule biosynthesis protein CAPD; CAPD protein, the great lakes regional C excellence, GLRCE, capsule biogenesis/degradation; HET: GLU; 1.79A {Bacillus anthracis} PDB: 3ga9_L*
Probab=100.00 E-value=1.4e-36 Score=291.07 Aligned_cols=146 Identities=22% Similarity=0.334 Sum_probs=127.7
Q ss_pred CChhhhhccccCcCcccCCCCeeeChHHHHHHHHHHHhCCcCccccHHHHHHHHHHHHhCCCcCHhhhccCCceecCCeE
Q psy11450 6 LFTFSRALFINEKNLTKVENDTYVWPALAKTFSIIAEEGGDALHNGSLTKAFVKDIQEAGGIITEADMNNYNVEIEEPIV 85 (350)
Q Consensus 6 ~~p~~~~~f~~~~g~~~~~Gd~l~~p~LA~TL~~ia~~G~~~FY~G~iA~~iv~~~~~~GG~lt~~DL~~Y~~~~~~pl~ 85 (350)
.+|.++ |+++ |+++++||+++||+||+||++||++|+++||+|+||++|+++ |+||++||++|+++|++||+
T Consensus 154 ~~~~~~--f~~~-G~~~~~G~~~~~p~LA~TL~~IA~~G~~~FY~G~iA~~iv~~-----G~lt~~DLa~y~~~~~~Pl~ 225 (323)
T 3g9k_L 154 SDKLSI--FYPN-GEPIETGETLIQTDLARTLKKIQKEGAKGFYEGGVARAISKT-----AKISLEDIKGYKVEVRKPVK 225 (323)
T ss_dssp CTTCGG--GSGG-GSCCCTTCEECCHHHHHHHHHHHHHTTHHHHSHHHHHHHHHH-----HTCCHHHHHTCCCEEECCEE
T ss_pred cCCccc--ccCC-CCCCCCCCEEECHHHHHHHHHHHHhCcccccCCHHHHHHHHc-----CCCCHHHHhhCCceEeCCEE
Confidence 467777 8885 999999999999999999999999999999999999999998 99999999999999999999
Q ss_pred EeecCCeEEEcCCCCCcHHHHHHHHHHHhccC----CCCChHHHHHHH-----------HHhCCCCcccccccccchHHH
Q psy11450 86 AKLKGNHTLWTSPLPGSGILLSFMLEILQYLI----PAPSELLWHQRI-----------WVTGDTHPEAHNSYSSSINQV 150 (350)
Q Consensus 86 ~~~~~g~~v~~~ppPs~G~~ll~~L~ile~~~----~~~~~~~~h~~~-----------~~lgDp~~~~~~~f~~~~~~~ 150 (350)
++| +||+||++||||||.+++++|+|||+|+ ..++++++|+++ +|+||| + | +++ +
T Consensus 226 ~~y-rg~~v~~~pPpssG~~~l~~L~ile~~~~~~~~~~~~~~~H~~~EA~k~A~adR~~~lgDP--~----f-~~v--p 295 (323)
T 3g9k_L 226 GNY-MGYDVYTAPPPFSGVTLLQMLKLAEKKEVYKDVDHTATYMSKMEEISRIAYQDRKKNLGDP--N----Y-VNM--D 295 (323)
T ss_dssp EEE-TTEEEEECCTTSCHHHHHHHHHHHHHTTGGGGTTSHHHHHHHHHHHHHHHHHHHHHTTCC---------------C
T ss_pred EEe-CCeEEEeCCCCCHHHHHHHHHHHHhcCCCccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCc--c----c-ccC--C
Confidence 999 9999999999999999999999999998 357889999998 579999 8 8 766 7
Q ss_pred HHHhhcHHHHHHHHhhcCC
Q psy11450 151 VQQLQSQDFIQEIRSQISD 169 (350)
Q Consensus 151 ~~~lls~~~~~~~~~~i~~ 169 (350)
+++|||++|+++++++|++
T Consensus 296 ~~~Lls~~ya~~~~~~I~d 314 (323)
T 3g9k_L 296 PNKMVSDKYISTMKNENGD 314 (323)
T ss_dssp HHHHTSHHHHHTCC-----
T ss_pred HHHhCCHHHHHHHHHhcCc
Confidence 8999999999999999974
No 12
>4gdv_A L-asparaginase; NTN enzyme, homodimer, hydrolase, L-asparagine; 1.75A {Homo sapiens} PDB: 4gdu_A 4gdt_A 4gdw_A
Probab=83.59 E-value=6.9 Score=36.75 Aligned_cols=86 Identities=19% Similarity=0.274 Sum_probs=51.5
Q ss_pred CCCCceEEEEEeCCCCEEEEEeecCCCCCceeeeCCcceeecCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCcE
Q psy11450 187 EDHGTANIVVYSEAGDAVVATSTVNLVFGSRFVSPSTGILVNDQMDDFSSPNITNYFHIPPSPANFIQPGKRPLSSMCPS 266 (350)
Q Consensus 187 ~~~~Tth~svvD~~GnaVs~t~Sl~~~FGSg~~~p~tGi~lNn~m~~Fs~~~~~~~f~l~~~~~N~i~PgkRP~st~~P~ 266 (350)
..++|...+++|++||..+.|||-+..| .+. -|..|-..+| |=+
T Consensus 166 ~~~dTVG~ValD~~G~iaaaTSTgG~~~---K~~--------GRVGDspiiG-------------------------aG~ 209 (310)
T 4gdv_A 166 KNLGTVGAVALDCKGNVAYATSTGGIVN---KMV--------GRVGDSPCLG-------------------------AGG 209 (310)
T ss_dssp -CCCCEEEEEECTTSCEEEEEEECCSTT---CCT--------TBCCSTTSBT-------------------------TTE
T ss_pred cccCceeeEEEeCCCCEEEEECCCCccc---CCC--------CCCCCcCcCC-------------------------cee
Confidence 4679999999999999999999977532 111 1222211111 011
Q ss_pred EEEccCCcEEEEEeCCCc-hhHHHHHHHHHHHHHhcCCCHHHHHhc
Q psy11450 267 IITDQDGNVKLAVGAAGG-TKITTSIAQVIMMNLWSNNTLKESVDA 311 (350)
Q Consensus 267 Iv~~~~g~~~l~~Ga~GG-~~i~~a~~q~l~~~l~~g~~l~~Ai~a 311 (350)
.+ |.+..-+..+--| .-|...++..+...+..|++++||.+.
T Consensus 210 yA---dn~~gavs~TG~GE~iir~~~A~~i~~~m~~G~s~~eA~~~ 252 (310)
T 4gdv_A 210 YA---DNDIGAVSTTGHGESILKVNLARLTLFHIEQGKTVEEAADL 252 (310)
T ss_dssp EE---ETTTEEEEEEECHHHHHHHTHHHHHHHHHHTTCCHHHHHHH
T ss_pred Ee---cCCcEEEEeecCcHHHHHHHHHHHHHHHHHCCCCHHHHHHH
Confidence 22 1222222223223 445556777788888899999999864
No 13
>1p4k_A N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase; alpha beta, beta alpha, sandwich, hydrolase; 1.90A {Elizabethkingia meningoseptica} SCOP: d.153.1.5 PDB: 1p4v_A 9gaa_A 9gaf_A 9gac_A 3ljq_A 2gl9_A* 1ayy_A 2gaw_A 2gac_A* 2gaw_B 1ayy_B 2gl9_B* 2gac_B*
Probab=83.21 E-value=4.1 Score=38.02 Aligned_cols=86 Identities=15% Similarity=0.243 Sum_probs=51.6
Q ss_pred CCCCceEEEEEeCCCCEEEEEeecCCCCCceeeeCCcceeecCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCcE
Q psy11450 187 EDHGTANIVVYSEAGDAVVATSTVNLVFGSRFVSPSTGILVNDQMDDFSSPNITNYFHIPPSPANFIQPGKRPLSSMCPS 266 (350)
Q Consensus 187 ~~~~Tth~svvD~~GnaVs~t~Sl~~~FGSg~~~p~tGi~lNn~m~~Fs~~~~~~~f~l~~~~~N~i~PgkRP~st~~P~ 266 (350)
..++|...+++|++||..+.|||-+..| . +--|..|=..+| +=+
T Consensus 148 ~~~dTVGaValD~~G~lAaaTSTgG~~~---K--------~~GRVGDspiiG-------------------------aG~ 191 (295)
T 1p4k_A 148 ENHNTIGMIALDAQGNLSGACTTSGMAY---K--------MHGRVGDSPIIG-------------------------AGL 191 (295)
T ss_dssp SBBCCEEEEEECTTSCEEEEEEECCSTT---C--------CTTBCCSTTSBT-------------------------TTE
T ss_pred CCCCCEEEEEEcCCCCEEEEEccCCccC---C--------CCCccCCcCCCC-------------------------cee
Confidence 3569999999999999999999976432 1 111222211111 012
Q ss_pred EEEccCCcEEEEEeCCCc-hhHHHHHHHHHHHHHhcCCCHHHHHhc
Q psy11450 267 IITDQDGNVKLAVGAAGG-TKITTSIAQVIMMNLWSNNTLKESVDA 311 (350)
Q Consensus 267 Iv~~~~g~~~l~~Ga~GG-~~i~~a~~q~l~~~l~~g~~l~~Ai~a 311 (350)
.+ |.+..-+..+-=| .-|...++.-+...+..|+++++|.+.
T Consensus 192 yA---d~~~gavs~TG~GE~iir~~~A~~i~~~m~~G~s~~~A~~~ 234 (295)
T 1p4k_A 192 FV---DNEIGAATATGHGEEVIRTVGTHLVVELMNQGRTPQQACKE 234 (295)
T ss_dssp EE---ETTTEEEEEEECHHHHHHHTHHHHHHHHHHTTCCHHHHHHH
T ss_pred ee---cCCcEEEEeecccHHHHhhhHHHHHHHHHHcCCCHHHHHHH
Confidence 22 2222233333334 444555777788888899999998863
No 14
>3cuq_A Vacuolar-sorting protein SNF8; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_A
Probab=59.14 E-value=3.8 Score=36.96 Aligned_cols=30 Identities=17% Similarity=0.275 Sum_probs=23.4
Q ss_pred cCccccHHHHHHHHHHH----HhCCCcCHhhhccC
Q psy11450 46 DALHNGSLTKAFVKDIQ----EAGGIITEADMNNY 76 (350)
Q Consensus 46 ~~FY~G~iA~~iv~~~~----~~GG~lt~~DL~~Y 76 (350)
..||. ++|.+|++.+. .+||+|+++||...
T Consensus 70 gdfy~-eLavqIvEvC~~tr~~nGGli~L~el~~~ 103 (234)
T 3cuq_A 70 GDFYY-ELGVQIIEVCLALKHRNGGLITLEELHQQ 103 (234)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHSSEEEHHHHHHH
T ss_pred chHHH-HHHHHHHHHHHHHHHhcCCeeEHHHHHHH
Confidence 36777 78999998874 57999999988653
No 15
>1apy_B Aspartylglucosaminidase; glycosylasparaginase, hydrolase; HET: NAG BMA; 2.00A {Homo sapiens} SCOP: d.153.1.5 PDB: 1apz_B*
Probab=56.83 E-value=9.9 Score=31.52 Aligned_cols=23 Identities=30% Similarity=0.374 Sum_probs=20.2
Q ss_pred ceEEEEEeCCCCEEEEEeecCCC
Q psy11450 191 TANIVVYSEAGDAVVATSTVNLV 213 (350)
Q Consensus 191 Tth~svvD~~GnaVs~t~Sl~~~ 213 (350)
|...+++|++||..+.|||-+..
T Consensus 1 TVGaValD~~G~lAaaTSTGG~~ 23 (141)
T 1apy_B 1 TIGMVVIHKTGHIAAGTSTNGIK 23 (141)
T ss_dssp CEEEEEECTTSCEEEEEEECCST
T ss_pred CEEEEEEeCCCCEEEEECCCCcC
Confidence 67889999999999999997753
No 16
>2gez_B L-asparaginase beta subunit; isoaspartyl aminopeptidase, NTN-hydrolase, autoproteolysis, taspase, sodium binding, hydrolase; 2.60A {Lupinus luteus}
Probab=56.24 E-value=11 Score=31.01 Aligned_cols=23 Identities=39% Similarity=0.364 Sum_probs=20.1
Q ss_pred ceEEEEEeCCCCEEEEEeecCCC
Q psy11450 191 TANIVVYSEAGDAVVATSTVNLV 213 (350)
Q Consensus 191 Tth~svvD~~GnaVs~t~Sl~~~ 213 (350)
|...+++|++||..+.|||-+..
T Consensus 1 TVGaValD~~G~iAaatSTgG~~ 23 (133)
T 2gez_B 1 TVGCVAVDSHGNLASATSTGGLV 23 (133)
T ss_dssp CEEEEEECTTCCEEEEEEECCST
T ss_pred CEEEEEEeCCCCEEEEECCCCcC
Confidence 67789999999999999997753
No 17
>1k2x_B Putative L-asparaginase; NTN hydrolase, asparginase, autoproteolysis, hydrolase; HET: CME; 1.65A {Escherichia coli} SCOP: d.153.1.5 PDB: 1jn9_B* 1t3m_B 2zal_B
Probab=56.00 E-value=11 Score=31.41 Aligned_cols=23 Identities=30% Similarity=0.297 Sum_probs=20.2
Q ss_pred ceEEEEEeCCCCEEEEEeecCCC
Q psy11450 191 TANIVVYSEAGDAVVATSTVNLV 213 (350)
Q Consensus 191 Tth~svvD~~GnaVs~t~Sl~~~ 213 (350)
|...+++|++||..+.|||-+..
T Consensus 1 TVGaValD~~G~iAaaTSTgG~~ 23 (143)
T 1k2x_B 1 TVGAVALDLDGNLAAATSTGGMT 23 (143)
T ss_dssp CEEEEEECTTSCEEEEEEECCCT
T ss_pred CeEEEEEeCCCCEEEEECCCCcC
Confidence 67889999999999999997754
No 18
>1u5t_A Appears to BE functionally related to SNF7; SNF8P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54 PDB: 1w7p_A
Probab=55.28 E-value=8.2 Score=34.76 Aligned_cols=54 Identities=11% Similarity=0.222 Sum_probs=38.3
Q ss_pred CCCCeeeChHHHHHHHHHH-HhC---------------CcCccccHHHHHHHHHHH----HhCCCcCHhhhccCC
Q psy11450 23 VENDTYVWPALAKTFSIIA-EEG---------------GDALHNGSLTKAFVKDIQ----EAGGIITEADMNNYN 77 (350)
Q Consensus 23 ~~Gd~l~~p~LA~TL~~ia-~~G---------------~~~FY~G~iA~~iv~~~~----~~GG~lt~~DL~~Y~ 77 (350)
..+||=++|...+-+..+. .-| ...||. ++|.+|++.+. .+||+|+++|+...-
T Consensus 50 Hk~eI~~dp~fR~~F~~mc~siGVDPLa~s~kg~~~lg~gdfy~-eLavqIvEvC~~tr~~nGGli~l~el~~~~ 123 (233)
T 1u5t_A 50 HNSELQASPEFRSKFMHMCSSIGIDPLSLFDRDKHLFTVNDFYY-EVCLKVIEICRQTKDMNGGVISFQELEKVH 123 (233)
T ss_dssp CTTTTTTCHHHHHHHHHHHHHHTCCHHHHTTSSGGGTTHHHHHH-HHHHHHHHHHHHHTTTSSSCEEHHHHHHTT
T ss_pred hHhhcccCHHHHHHHHHHHHHcCCCCCccCCccccccCcchHHH-HHHHHHHHHHHHHHHhcCCeeEHHHHHHHH
Confidence 4467778888755555542 223 346887 79999999986 569999999987654
No 19
>3c17_A L-asparaginase precursor; isoaspartyl peptidase, NTN-hydrolase, autoprot precursor, hydrolase; 1.95A {Escherichia coli} PDB: 2zak_A
Probab=51.47 E-value=14 Score=34.76 Aligned_cols=27 Identities=26% Similarity=0.323 Sum_probs=23.7
Q ss_pred CCCCceEEEEEeCCCCEEEEEeecCCC
Q psy11450 187 EDHGTANIVVYSEAGDAVVATSTVNLV 213 (350)
Q Consensus 187 ~~~~Tth~svvD~~GnaVs~t~Sl~~~ 213 (350)
..++|...+++|++||..+.|||-+..
T Consensus 174 ~~~dTVGaValD~~G~lAaaTSTGG~~ 200 (320)
T 3c17_A 174 QKMGAVGAVALDLDGNLAAATSTGGMT 200 (320)
T ss_dssp TTCCCEEEEEECTTSCEEEEEEECCCT
T ss_pred CCCCCEEEEEEeCCCCEEEEEcCCCcC
Confidence 457999999999999999999997754
No 20
>2a8j_A Taspase 1, threonine aspartase 1; MLL, glycosylspraginase, asparaginase, hydrolase; 1.90A {Homo sapiens} PDB: 2a8i_A 2a8m_A 2a8l_A
Probab=45.92 E-value=16 Score=35.63 Aligned_cols=26 Identities=27% Similarity=0.302 Sum_probs=21.2
Q ss_pred CCCceEEEEEeCCCCEEEEEeecCCC
Q psy11450 188 DHGTANIVVYSEAGDAVVATSTVNLV 213 (350)
Q Consensus 188 ~~~Tth~svvD~~GnaVs~t~Sl~~~ 213 (350)
.+||...+++|++||..+.|||-+..
T Consensus 231 ~~dTVGaVAlD~~G~lAAaTSTGG~~ 256 (420)
T 2a8j_A 231 TLDTVGAVVVDHEGNVAAAVSSGGLA 256 (420)
T ss_dssp ---CEEEEEEETTCCEEEEEEECCST
T ss_pred CCCCEEEEEEeCCCCEEEEEcCCCCc
Confidence 46999999999999999999997754
No 21
>1u5t_B Defective in vacuolar protein sorting; VPS36P; ESCRT, endosomal, trafficking, protein complex, transport protein; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=40.33 E-value=9.6 Score=32.49 Aligned_cols=15 Identities=0% Similarity=0.042 Sum_probs=10.6
Q ss_pred CccccHHHHHHHHHHH
Q psy11450 47 ALHNGSLTKAFVKDIQ 62 (350)
Q Consensus 47 ~FY~G~iA~~iv~~~~ 62 (350)
.||. ++|.+|++.+.
T Consensus 11 ~f~~-ELa~qi~e~c~ 25 (169)
T 1u5t_B 11 LFLD-EIAREIYEFTL 25 (169)
T ss_dssp THHH-HHHHHHHHHHH
T ss_pred HHHH-HHHHHHHHHHh
Confidence 3555 68888887777
No 22
>3cuq_B Vacuolar protein-sorting-associated protein 36; ESCRT, MBV, VPS, nucleus, protein transport, transc transcription regulation, transport, endosome; 2.61A {Homo sapiens} PDB: 2zme_B
Probab=36.11 E-value=13 Score=33.01 Aligned_cols=28 Identities=29% Similarity=0.465 Sum_probs=21.2
Q ss_pred cCccccHHHHHHHHHHH----HhCCCcCHhhhc
Q psy11450 46 DALHNGSLTKAFVKDIQ----EAGGIITEADMN 74 (350)
Q Consensus 46 ~~FY~G~iA~~iv~~~~----~~GG~lt~~DL~ 74 (350)
..||. ++|.+|++.+. .+||.|++.||-
T Consensus 71 ~~f~~-ELa~qi~e~c~~~~~~~GG~I~L~dl~ 102 (218)
T 3cuq_B 71 TQYHM-QLAKQLAGILQVPLEERGGIMSLTEVY 102 (218)
T ss_dssp CHHHH-HHHHHHHHHHHHHHHHTTSEEEHHHHH
T ss_pred cHHHH-HHHHHHHHHHHHHHHhCCCeEEHHHHH
Confidence 34676 89999998875 568888877773
No 23
>2vqe_K 30S ribosomal protein S11, 30S ribosomal protein S6; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.55.4.1 PDB: 1gix_N* 1hnw_K* 1hnx_K* 1hnz_K* 1hr0_K 1ibk_K* 1ibl_K* 1ibm_K 1j5e_K 1jgo_N* 1jgp_N* 1jgq_N* 1ml5_N* 1n32_K* 1n33_K* 1n34_K 1n36_K 1xmo_K* 1xmq_K* 1xnq_K* ...
Probab=30.77 E-value=34 Score=27.75 Aligned_cols=27 Identities=7% Similarity=0.142 Sum_probs=21.1
Q ss_pred CCCceEEEEEeCCCCEEEEEeecCCCC
Q psy11450 188 DHGTANIVVYSEAGDAVVATSTVNLVF 214 (350)
Q Consensus 188 ~~~Tth~svvD~~GnaVs~t~Sl~~~F 214 (350)
...-|++++.|..||.+++.++-...|
T Consensus 24 s~NNTivtiTd~~G~~~~~~SaG~~gf 50 (129)
T 2vqe_K 24 SYNNTIVTITDPDGNPITWSSGGVIGY 50 (129)
T ss_dssp CSSCEEEEEECTTSCEEEECCTTTTTC
T ss_pred cCCCEEEEEEcCCCCEEEEEeccceeE
Confidence 446799999999999998887755433
No 24
>3bbn_K Ribosomal protein S11; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=28.48 E-value=46 Score=27.41 Aligned_cols=27 Identities=19% Similarity=0.122 Sum_probs=21.6
Q ss_pred CCCceEEEEEeCCCCEEEEEeecCCCC
Q psy11450 188 DHGTANIVVYSEAGDAVVATSTVNLVF 214 (350)
Q Consensus 188 ~~~Tth~svvD~~GnaVs~t~Sl~~~F 214 (350)
...-|++++.|..||.+++.++-...|
T Consensus 37 s~NNTivtiTD~~G~~i~~~SaG~~Gf 63 (140)
T 3bbn_K 37 SFNNTIVTVTDVRGRVVSWASAGTCGF 63 (140)
T ss_dssp CSSCEEEEEECSSSCEEEEEETTTSSC
T ss_pred cCCCEEEEEEcCCCCEEEEEeccceeE
Confidence 446799999999999999988755433
No 25
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=27.54 E-value=19 Score=25.22 Aligned_cols=21 Identities=14% Similarity=0.403 Sum_probs=18.8
Q ss_pred HHHHHHHHHhCCCcCHhhhcc
Q psy11450 55 KAFVKDIQEAGGIITEADMNN 75 (350)
Q Consensus 55 ~~iv~~~~~~GG~lt~~DL~~ 75 (350)
++|.+.++..||++..+++++
T Consensus 13 ~~lL~yIr~sGGildI~~~a~ 33 (59)
T 2xvc_A 13 RELLDYIVNNGGFLDIEHFSK 33 (59)
T ss_dssp HHHHHHHHHTTSEEEHHHHHH
T ss_pred HHHHHHHHHcCCEEeHHHHHH
Confidence 678999999999999999965
No 26
>3r8n_K 30S ribosomal protein S11; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_K 3fih_K* 3iy8_K 3j18_K* 2wwl_K 3oar_K 3oaq_K 3ofb_K 3ofa_K 3ofp_K 3ofx_K 3ofy_K 3ofo_K 3r8o_K 4a2i_K 4gd1_K 4gd2_K 3i1m_K 1vs7_K* 3e1a_C ...
Probab=22.79 E-value=37 Score=27.04 Aligned_cols=24 Identities=8% Similarity=0.141 Sum_probs=18.8
Q ss_pred CCCceEEEEEeCCCCEEEEEeecC
Q psy11450 188 DHGTANIVVYSEAGDAVVATSTVN 211 (350)
Q Consensus 188 ~~~Tth~svvD~~GnaVs~t~Sl~ 211 (350)
...-|++.+.|..||.++..++-.
T Consensus 14 s~NNTivtiTD~~G~~i~~~S~G~ 37 (117)
T 3r8n_K 14 SFNNTIVTITDRQGNALGWATAGG 37 (117)
T ss_dssp CSSCEEEEEECTTSCCSEEEETGG
T ss_pred ccCCEEEEEEcCCCCEEEEEcCCc
Confidence 345689999999999887766543
No 27
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=21.39 E-value=66 Score=18.03 Aligned_cols=17 Identities=24% Similarity=0.309 Sum_probs=12.8
Q ss_pred CcEEEEccCCcEEEEEe
Q psy11450 264 CPSIITDQDGNVKLAVG 280 (350)
Q Consensus 264 ~P~Iv~~~~g~~~l~~G 280 (350)
.|+.|.|++|++..-+|
T Consensus 5 ~ss~IYD~~g~~i~~lg 21 (26)
T 2v2f_A 5 TSSKIYDNKNQLIADLG 21 (26)
T ss_pred CCCEEEeCCCCEeeecc
Confidence 46778899999776664
Done!