BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11470
(114 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DYH|A Chain A, Crystal Structure Of The Keap1 Protein In Complexed With
The N-Terminal Region Of The Nrf2 Transcription Factor
pdb|2Z32|A Chain A, Crystal Structure Of Keap1 Complexed With Prothymosin
Alpha
pdb|3ADE|A Chain A, Crystal Structure Of Keap1 In Complex With Sequestosome-
1P62
Length = 318
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E +++ TWT + +R+ R G V GKI+V+GG DG +++ E + SD
Sbjct: 226 SVERYDVETETWTFVAPMRHHRSALGITVHQGKIYVLGGYDGHTFLDSVECYDPDSD--- 282
Query: 62 RIEVTWTSLPSMLTHRHGLGKA 83
TW+ + M + R G+G A
Sbjct: 283 ----TWSEVTRMTSGRSGVGVA 300
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E +E + W + + RR+ G VLN ++ VGG DG +N+ E +
Sbjct: 132 SVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECY-----YPE 186
Query: 62 RIEVTWTSLPSMLTHRHGLGKASLHIYI 89
R E W + M T R G G LH I
Sbjct: 187 RNE--WRMITPMNTIRSGAGVCVLHNCI 212
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S E + N W I + R G VL+ I+ GG DG +N+ E + ++
Sbjct: 179 SAECYYPERNEWRMITPMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE--- 235
Query: 62 RIEVTWTSLPSMLTHRHGLG 81
TWT + M HR LG
Sbjct: 236 ----TWTFVAPMRHHRSALG 251
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 3 IEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNT-FEYLNTHSDMKD 61
+E + +W + L+ R V+ G ++ VGGR+ NT L+ ++ M +
Sbjct: 35 LEAYNPSNGSWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 94
Query: 62 RIEVTWTSLPSMLTHRH--GLGKASLHIYIQNVPEGLVYHKAM 102
+ W+ SM R+ G+G HIY G ++H ++
Sbjct: 95 Q----WSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCIHHSSV 133
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
+++ + N W+ + R + G V++G I+ VGG G ++ E D
Sbjct: 85 ALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCIHHSSVERYEPERD--- 141
Query: 62 RIEVTWTSLPSMLTHRHGLGKASLH 86
W + MLT R G+G A L+
Sbjct: 142 ----EWHLVAPMLTRRIGVGVAVLN 162
>pdb|1X2J|A Chain A, Structural Basis For The Defects Of Human Lung Cancer
Somatic Mutations In The Repression Activity Of Keap1 On
Nrf2
pdb|1X2R|A Chain A, Structural Basis For The Defects Of Human Lung Cancer
Somatic Mutations In The Repression Activity Of Keap1 On
Nrf2
Length = 316
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E +++ TWT + +R+ R G V GKI+V+GG DG +++ E + SD
Sbjct: 225 SVERYDVETETWTFVAPMRHHRSALGITVHQGKIYVLGGYDGHTFLDSVECYDPDSD--- 281
Query: 62 RIEVTWTSLPSMLTHRHGLGKA 83
TW+ + M + R G+G A
Sbjct: 282 ----TWSEVTRMTSGRSGVGVA 299
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E +E + W + + RR+ G VLN ++ VGG DG +N+ E +
Sbjct: 131 SVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECY-----YPE 185
Query: 62 RIEVTWTSLPSMLTHRHGLGKASLHIYI 89
R E W + M T R G G LH I
Sbjct: 186 RNE--WRMITPMNTIRSGAGVCVLHNCI 211
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 34/80 (42%), Gaps = 7/80 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S E + N W I + R G VL+ I+ GG DG +N+ E + ++
Sbjct: 178 SAECYYPERNEWRMITPMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE--- 234
Query: 62 RIEVTWTSLPSMLTHRHGLG 81
TWT + M HR LG
Sbjct: 235 ----TWTFVAPMRHHRSALG 250
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Query: 3 IEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNT-FEYLNTHSDMKD 61
+E + +W + L+ R V+ G ++ VGGR+ NT L+ ++ M +
Sbjct: 34 LEAYNPSNGSWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 93
Query: 62 RIEVTWTSLPSMLTHRH--GLGKASLHIYIQNVPEGLVYHKAM 102
+ W+ SM R+ G+G HIY G ++H ++
Sbjct: 94 Q----WSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCIHHSSV 132
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
+++ + N W+ + R + G V++G I+ VGG G ++ E D
Sbjct: 84 ALDCYNPMTNQWSPCASMSVPRNRIGVGVIDGHIYAVGGSHGCIHHSSVERYEPERD--- 140
Query: 62 RIEVTWTSLPSMLTHRHGLGKASLH 86
W + MLT R G+G A L+
Sbjct: 141 ----EWHLVAPMLTRRIGVGVAVLN 161
>pdb|3VNG|A Chain A, Crystal Structure Of Keap1 In Complex With Synthetic Small
Molecular Based On A Co-crystallization
pdb|3VNH|A Chain A, Crystal Structure Of Keap1 Soaked With Synthetic Small
Molecular
Length = 309
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E +++ TWT + +++RR G V G+I+V+GG DG +++ E + +D
Sbjct: 233 SVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD--- 289
Query: 62 RIEVTWTSLPSMLTHRHGLGKA 83
TW+ + M + R G+G A
Sbjct: 290 ----TWSEVTRMTSGRSGVGVA 307
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E +E + W + + RR+ G VLN ++ VGG DG +N+ E +
Sbjct: 139 SVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECY-----YPE 193
Query: 62 RIEVTWTSLPSMLTHRHGLGKASLHIYI 89
R E W + +M T R G G LH I
Sbjct: 194 RNE--WRMITAMNTIRSGAGVCVLHNCI 219
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 3 IEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNT-FEYLNTHSDMKD 61
+E + TW + L+ R V+ G ++ VGGR+ NT L+ ++ M +
Sbjct: 42 LEAYNPSDGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 101
Query: 62 RIEVTWTSLPSMLTHRH--GLGKASLHIYIQNVPEGLVYHKAM 102
+ W+ M R+ G+G HIY G ++H ++
Sbjct: 102 Q----WSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSV 140
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
+++ + N W+ + R + G V++G I+ VGG G N+ E D
Sbjct: 92 ALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERD--- 148
Query: 62 RIEVTWTSLPSMLTHRHGLGKASLH 86
W + MLT R G+G A L+
Sbjct: 149 ----EWHLVAPMLTRRIGVGVAVLN 169
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S E + N W I + R G VL+ I+ GG DG +N+ E + ++
Sbjct: 186 SAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE--- 242
Query: 62 RIEVTWTSLPSMLTHRHGLG 81
TWT + M R LG
Sbjct: 243 ----TWTFVAPMKHRRSALG 258
>pdb|1U6D|X Chain X, Crystal Structure Of The Kelch Domain Of Human Keap1
pdb|2FLU|X Chain X, Crystal Structure Of The Kelch-Neh2 Complex
Length = 308
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E +++ TWT + +++RR G V G+I+V+GG DG +++ E + +D
Sbjct: 232 SVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD--- 288
Query: 62 RIEVTWTSLPSMLTHRHGLGKA 83
TW+ + M + R G+G A
Sbjct: 289 ----TWSEVTRMTSGRSGVGVA 306
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E +E + W + + RR+ G VLN ++ VGG DG +N+ E +
Sbjct: 138 SVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECY-----YPE 192
Query: 62 RIEVTWTSLPSMLTHRHGLGKASLHIYI 89
R E W + +M T R G G LH I
Sbjct: 193 RNE--WRMITAMNTIRSGAGVCVLHNCI 218
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 3 IEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNT-FEYLNTHSDMKD 61
+E + TW + L+ R V+ G ++ VGGR+ NT L+ ++ M +
Sbjct: 41 LEAYNPSDGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100
Query: 62 RIEVTWTSLPSMLTHRH--GLGKASLHIYIQNVPEGLVYHKAM 102
+ W+ M R+ G+G HIY G ++H ++
Sbjct: 101 Q----WSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSV 139
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
+++ + N W+ + R + G V++G I+ VGG G N+ E D
Sbjct: 91 ALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERD--- 147
Query: 62 RIEVTWTSLPSMLTHRHGLGKASLH 86
W + MLT R G+G A L+
Sbjct: 148 ----EWHLVAPMLTRRIGVGVAVLN 168
Score = 33.5 bits (75), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S E + N W I + R G VL+ I+ GG DG +N+ E + ++
Sbjct: 185 SAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE--- 241
Query: 62 RIEVTWTSLPSMLTHRHGLG 81
TWT + M R LG
Sbjct: 242 ----TWTFVAPMKHRRSALG 257
>pdb|2VPJ|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl12
Length = 301
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E ++ + W+ +G ++ R G V +G I+ +GG DGL +N+ E + H+
Sbjct: 129 SMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGH-- 186
Query: 62 RIEVTWTSLPSMLTHRHGLGKASL--HIYI 89
WT++ M T R G G A L HIY+
Sbjct: 187 -----WTNVTPMATKRSGAGVALLNDHIYV 211
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 7/84 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E + IR ++WT + + R GA VL G+++ + G DG +++ E D
Sbjct: 223 SVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIE-------CYD 275
Query: 62 RIEVTWTSLPSMLTHRHGLGKASL 85
I +W + SM T R G L
Sbjct: 276 PIIDSWEVVTSMGTQRCDAGVCVL 299
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E ++ WT + + +R G +LN I+VVGG DG +++ E N +D
Sbjct: 176 SVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTD--- 232
Query: 62 RIEVTWTSLPSMLTHRHGLGKASL 85
+WT++ SM T R +G L
Sbjct: 233 ----SWTTVTSMTTPRCYVGATVL 252
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 3 IEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDR 62
+E ++ + W+ + + +R + L+ +I+V+GG DG +++ E L+ +D +D
Sbjct: 33 VEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTAD-EDG 91
Query: 63 IEVTWTSLPSMLTHRHGLGKASL--HIYIQNVPEGLVYHKAM 102
+ W S+ M R G +L IY+ +G H +M
Sbjct: 92 V---WYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSM 130
>pdb|2XN4|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl2
(mayven)
pdb|2XN4|B Chain B, Crystal Structure Of The Kelch Domain Of Human Klhl2
(mayven)
Length = 302
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSD 58
+++ ++ + WT + ++R+RR GA VLNG ++ VGG DG +++ E N S+
Sbjct: 78 TVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSN 134
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+EV++ N W ++ + R G +NG ++VVGG DG + + EY N +D
Sbjct: 221 SVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTD--- 277
Query: 62 RIEVTWTSLPSMLT 75
WT + S ++
Sbjct: 278 ----KWTVVSSCMS 287
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E ++ + W ++ L +RR + G + G + VGG +G V T D D
Sbjct: 31 SVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTV-------DSYD 83
Query: 62 RIEVTWTSLPSMLTHRHGLGKASLH 86
++ WTS+ +M R LG A L+
Sbjct: 84 PVKDQWTSVANMRDRRSTLGAAVLN 108
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDG 43
++E + N WT I + RR G VLN ++ VGG DG
Sbjct: 174 TVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDG 215
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRD--GLKTVNTFEYLNTHSDM 59
S+E + I++N W + + RR G V+ G ++ VGG D + ++T E N ++
Sbjct: 125 SVEAYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTN- 183
Query: 60 KDRIEVTWTSLPSMLTHRHGLGKASLH 86
WT + M T R G G L+
Sbjct: 184 ------EWTYIAEMSTRRSGAGVGVLN 204
>pdb|1ZGK|A Chain A, 1.35 Angstrom Structure Of The Kelch Domain Of Keap1
Length = 308
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E +++ TWT + ++RR G V G+I+V+GG DG +++ E + +D
Sbjct: 232 SVERYDVETETWTFVAPXKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTD--- 288
Query: 62 RIEVTWTSLPSMLTHRHGLGKA 83
TW+ + + R G+G A
Sbjct: 289 ----TWSEVTRXTSGRSGVGVA 306
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S+E +E + W + RR+ G VLN ++ VGG DG +N+ E +
Sbjct: 138 SVERYEPERDEWHLVAPXLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECY-----YPE 192
Query: 62 RIEVTWTSLPSMLTHRHGLGKASLHIYI 89
R E W + + T R G G LH I
Sbjct: 193 RNE--WRXITAXNTIRSGAGVCVLHNCI 218
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 3 IEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDR 62
+E + TW + L+ R V+ G ++ VGGR+ NT ++ D +
Sbjct: 41 LEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTD---SSALDCYNP 97
Query: 63 IEVTWTSLP--SMLTHRHGLGKASLHIYIQNVPEGLVYHKAM 102
W+ S+ +R G+G HIY G ++H ++
Sbjct: 98 XTNQWSPCAPXSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSV 139
Score = 32.3 bits (72), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
+++ + N W+ R + G V++G I+ VGG G N+ E D
Sbjct: 91 ALDCYNPXTNQWSPCAPXSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERD--- 147
Query: 62 RIEVTWTSLPSMLTHRHGLGKASLH 86
W + LT R G+G A L+
Sbjct: 148 ----EWHLVAPXLTRRIGVGVAVLN 168
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 7/80 (8%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKD 61
S E + N W I R G VL+ I+ GG DG +N+ E + ++
Sbjct: 185 SAECYYPERNEWRXITAXNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE--- 241
Query: 62 RIEVTWTSLPSMLTHRHGLG 81
TWT + R LG
Sbjct: 242 ----TWTFVAPXKHRRSALG 257
>pdb|3II7|A Chain A, Crystal Structure Of The Kelch Domain Of Human Klhl7
Length = 306
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLN 54
S EV++ TWTE+ + R G + KI VGG++GL ++ EY +
Sbjct: 170 SCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYD 222
Score = 32.3 bits (72), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 3 IEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDR 62
E ++ R +W + +R G NG I+V GG G + LN+ ++ D
Sbjct: 120 FECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNV--SGRVLNS-CEVYDP 176
Query: 63 IEVTWTSLPSMLTHR--HGL 80
TWT L M+ R HGL
Sbjct: 177 ATETWTELCPMIEARKNHGL 196
>pdb|2WOZ|A Chain A, The Novel Beta-Propeller Of The Btb-Kelch Protein Krp1
Provides The Binding Site For Lasp-1 That Is Necessary
For Pseudopodia Extension
Length = 318
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 5 VFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGG--RDGLK-TVNTFE 51
++ + W ++ ++ R FG + GKI + GG DGL +V F+
Sbjct: 179 IYNPKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFD 228
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGG 40
S+E F+++ N W + R L G ++ +GG
Sbjct: 223 SVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGG 261
>pdb|3MC2|A Chain A, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
pdb|3MC2|B Chain B, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
pdb|3MC2|C Chain C, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
pdb|3MC2|D Chain D, Crystal Structure Of The Murine Inhibitor Of Carbonic
Anhydrase
Length = 687
Score = 29.3 bits (64), Expect = 0.66, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 37/104 (35%), Gaps = 35/104 (33%)
Query: 28 AEVLNGKIHVVGGRDGLKTVNTFEYLNTHSD---------------------MKDRIEVT 66
A L+G V G GL V YL+THS K + +T
Sbjct: 388 AMSLDGGFAYVAGHCGLVPVLAENYLSTHSSGRLGSKCVNAPLEGYYVVAVVKKSDVGIT 447
Query: 67 WTSLPSMLTHRHGLGKASLHIYIQ-----NVPEGLVYHKAMSSR 105
W SL GK S H + NVP GL+Y + S +
Sbjct: 448 WKSLQ---------GKKSCHTAVGTSEGWNVPMGLIYDQTGSCK 482
>pdb|4ASC|A Chain A, Crystal Structure Of The Kelch Domain Of Human Kbtbd5
Length = 315
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 5 VFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGG 40
V++ + W E+ ++ R FGA V +G+I V G
Sbjct: 169 VYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAG 204
>pdb|2DNF|A Chain A, Solution Structure Of Rsgi Ruh-062, A Dcx Domain From
Human
Length = 108
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 1 MSIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYL 53
M E +R+ + L + ++ GAE+ NG+ +V GRD K + E L
Sbjct: 48 MVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKKLPYGELL 100
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 7/36 (19%)
Query: 77 RHGLGKASLHIYIQNVPEGLVY-------HKAMSSR 105
RH +G A L ++ Q + EG+ Y H+A+++R
Sbjct: 105 RHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAAR 140
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 7/36 (19%)
Query: 77 RHGLGKASLHIYIQNVPEGLVY-------HKAMSSR 105
RH +G A L ++ Q + EG+ Y H+A+++R
Sbjct: 106 RHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAAR 141
>pdb|1PEM|A Chain A, Ribonucleotide Reductase Protein R1e From Salmonella
Typhimurium
pdb|1PEO|A Chain A, Ribonucleotide Reductase Protein R1e From Salmonella
Typhimurium
pdb|1PEQ|A Chain A, Ribonucleotide Reductase Protein R1e From Salmonella
Typhimurium
pdb|1PEU|A Chain A, Ribonucleotide Reductase Protein R1e From Salmonella
Typhimurium
pdb|2BQ1|E Chain E, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
Salmonella Typhimurium
pdb|2BQ1|F Chain F, Ribonucleotide Reductase Class 1b Holocomplex R1e,R2f From
Salmonella Typhimurium
Length = 714
Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 3/64 (4%)
Query: 36 HVVGGRDGLKTVNT-FEYLNTHSDMKDRIEVTWTSLPSMLTHRHGLGKASLHIYIQNVPE 94
HV+ D +TV T L SDM V + + +H GLG+ +LH Y+ E
Sbjct: 424 HVMDSPDIGRTVETAIRGLTAVSDMSHIRSVPSIAAGNAASHAIGLGQMNLHGYLAR--E 481
Query: 95 GLVY 98
G+ Y
Sbjct: 482 GIAY 485
>pdb|1Z05|A Chain A, Crystal Structure Of The Rok Family Transcriptional
Regulator, Homolog Of E.Coli Mlc Protein
Length = 429
Score = 25.4 bits (54), Expect = 7.4, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 8/69 (11%)
Query: 51 EYLNTHSDMKDRIEVTWTSLPSMLTHRHGLGKASLHIYIQNV---PE-----GLVYHKAM 102
E+ T++ DR+ +LP ++ G+ H ++N+ PE GL A
Sbjct: 157 EFFQTYAAQLDRVTSIAITLPGLVNSEQGIVLQMPHYNVKNLALGPEIYKATGLPVFVAN 216
Query: 103 SSRKWRIVQ 111
+R W + +
Sbjct: 217 DTRAWALAE 225
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,484,191
Number of Sequences: 62578
Number of extensions: 127011
Number of successful extensions: 346
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 289
Number of HSP's gapped (non-prelim): 54
length of query: 114
length of database: 14,973,337
effective HSP length: 77
effective length of query: 37
effective length of database: 10,154,831
effective search space: 375728747
effective search space used: 375728747
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 45 (21.9 bits)