Query psy11470
Match_columns 114
No_of_seqs 122 out of 1398
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 19:18:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11470.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11470hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4asc_A Kelch repeat and BTB do 99.9 5.5E-22 1.9E-26 138.0 14.3 106 1-113 117-230 (315)
2 2xn4_A Kelch-like protein 2; s 99.9 1.4E-21 4.7E-26 135.0 14.2 105 2-113 31-142 (302)
3 1zgk_A Kelch-like ECH-associat 99.9 2.9E-21 9.9E-26 134.1 14.6 105 2-113 185-296 (308)
4 3ii7_A Kelch-like protein 7; p 99.9 1.8E-21 6.1E-26 134.7 13.2 105 2-113 170-281 (306)
5 1zgk_A Kelch-like ECH-associat 99.9 3.7E-21 1.3E-25 133.6 14.2 106 1-113 137-249 (308)
6 3ii7_A Kelch-like protein 7; p 99.9 2.2E-21 7.4E-26 134.3 13.0 105 2-113 119-234 (306)
7 2woz_A Kelch repeat and BTB do 99.9 2.4E-21 8.1E-26 135.0 13.0 105 2-113 128-240 (318)
8 2xn4_A Kelch-like protein 2; s 99.9 4.1E-21 1.4E-25 132.7 14.0 103 2-111 174-283 (302)
9 2vpj_A Kelch-like protein 12; 99.9 3.7E-21 1.3E-25 132.7 13.7 106 1-113 128-240 (301)
10 2vpj_A Kelch-like protein 12; 99.9 5.2E-21 1.8E-25 132.0 14.1 106 1-113 175-287 (301)
11 4asc_A Kelch repeat and BTB do 99.9 3.2E-21 1.1E-25 134.1 12.9 105 2-113 68-183 (315)
12 2woz_A Kelch repeat and BTB do 99.9 9.9E-21 3.4E-25 131.8 12.0 104 3-113 80-193 (318)
13 2uvk_A YJHT; unknown function, 99.8 2.5E-19 8.5E-24 126.2 11.8 87 2-95 32-129 (357)
14 2zwa_A Leucine carboxyl methyl 99.8 8.1E-19 2.8E-23 134.0 12.6 103 1-113 412-531 (695)
15 2uvk_A YJHT; unknown function, 99.8 8.6E-19 2.9E-23 123.4 10.8 106 1-113 86-237 (357)
16 2zwa_A Leucine carboxyl methyl 99.7 3.2E-17 1.1E-21 125.3 11.9 102 1-112 468-591 (695)
17 1k3i_A Galactose oxidase precu 99.7 1.4E-16 4.8E-21 120.6 7.6 99 2-111 220-330 (656)
18 1k3i_A Galactose oxidase precu 99.5 3.2E-14 1.1E-18 107.7 8.5 85 2-93 433-530 (656)
19 3mbr_X Glutamine cyclotransfer 95.0 0.3 1E-05 32.9 9.2 53 1-58 43-95 (243)
20 3nol_A Glutamine cyclotransfer 93.1 0.35 1.2E-05 33.0 6.6 52 2-58 66-117 (262)
21 2iwa_A Glutamine cyclotransfer 92.0 1.6 5.4E-05 29.6 8.7 53 1-58 44-96 (266)
22 3mbr_X Glutamine cyclotransfer 86.2 5.8 0.0002 26.6 9.1 72 13-94 9-84 (243)
23 3nok_A Glutaminyl cyclase; bet 85.6 1.7 5.7E-05 29.7 5.1 50 3-58 77-126 (268)
24 4gga_A P55CDC, cell division c 80.2 12 0.00042 25.9 9.4 52 2-58 126-179 (420)
25 3nol_A Glutamine cyclotransfer 76.6 13 0.00043 25.2 6.9 72 13-94 31-106 (262)
26 1k8k_C P40, ARP2/3 complex 41 75.9 15 0.0005 24.4 9.8 52 2-58 31-84 (372)
27 3dsm_A Uncharacterized protein 74.8 17 0.00057 24.5 8.8 54 2-58 153-213 (328)
28 3q7m_A Lipoprotein YFGL, BAMB; 73.6 18 0.00063 24.5 9.6 50 2-59 288-339 (376)
29 3dwl_C Actin-related protein 2 71.6 10 0.00035 25.5 5.6 52 2-58 34-87 (377)
30 3dsm_A Uncharacterized protein 71.5 20 0.00069 24.1 9.0 49 2-58 204-254 (328)
31 3jrp_A Fusion protein of prote 66.7 25 0.00085 23.2 7.9 59 2-72 34-96 (379)
32 3jro_A Fusion protein of prote 64.9 38 0.0013 25.8 8.0 59 2-72 32-94 (753)
33 1p22_A F-BOX/WD-repeat protein 55.6 48 0.0016 22.9 6.9 50 2-58 277-326 (435)
34 3nok_A Glutaminyl cyclase; bet 55.2 35 0.0012 23.2 5.7 55 27-94 59-115 (268)
35 3hfq_A Uncharacterized protein 55.0 39 0.0013 22.4 6.0 53 3-58 20-73 (347)
36 2b4w_A Hypothetical protein, c 54.7 51 0.0017 22.9 7.4 58 30-94 38-99 (315)
37 3q7m_A Lipoprotein YFGL, BAMB; 54.1 47 0.0016 22.4 11.1 58 2-70 64-130 (376)
38 4ggc_A P55CDC, cell division c 53.8 41 0.0014 21.6 8.9 52 2-58 46-99 (318)
39 2iwa_A Glutamine cyclotransfer 53.2 48 0.0017 22.2 7.8 72 13-94 9-85 (266)
40 3v9f_A Two-component system se 50.3 81 0.0028 24.0 7.9 78 4-96 562-649 (781)
41 3bws_A Protein LP49; two-domai 47.7 63 0.0022 22.0 7.6 52 2-58 102-154 (433)
42 1flg_A Protein (quinoprotein e 46.5 88 0.003 23.3 7.4 56 2-70 467-524 (582)
43 4aow_A Guanine nucleotide-bind 46.2 58 0.002 21.1 7.4 49 3-58 197-247 (340)
44 2cn3_A Xyloglucanase, beta-1,4 45.6 1E+02 0.0034 23.6 11.2 58 11-75 232-294 (737)
45 1kv9_A Type II quinohemoprotei 44.6 99 0.0034 23.3 8.3 63 2-69 128-194 (668)
46 1l0q_A Surface layer protein; 44.1 69 0.0024 21.4 7.0 50 2-58 97-148 (391)
47 3ott_A Two-component system se 42.9 1.1E+02 0.0036 23.2 7.4 78 3-96 538-619 (758)
48 1ri6_A Putative isomerase YBHE 42.8 66 0.0023 20.8 5.8 62 2-75 254-321 (343)
49 1gxr_A ESG1, transducin-like e 42.3 66 0.0023 20.6 9.1 52 2-58 120-173 (337)
50 4a2l_A BT_4663, two-component 41.9 1.1E+02 0.0039 23.2 10.1 79 3-96 564-652 (795)
51 3dqy_A Toluene 1,2-dioxygenase 41.8 45 0.0016 18.6 4.2 33 4-37 66-98 (106)
52 1w6s_A Methanol dehydrogenase 40.5 1.1E+02 0.0039 22.9 7.9 55 2-69 454-510 (599)
53 2ad6_A Methanol dehydrogenase 39.5 1.1E+02 0.0039 22.5 8.1 64 2-70 126-193 (571)
54 1yiq_A Quinohemoprotein alcoho 38.5 1.3E+02 0.0044 22.9 8.4 64 2-70 132-200 (689)
55 1kb0_A Quinohemoprotein alcoho 37.1 1.3E+02 0.0046 22.7 8.4 64 2-70 139-207 (677)
56 1w6s_A Methanol dehydrogenase 36.3 1.4E+02 0.0046 22.5 7.5 64 2-70 132-199 (599)
57 3gce_A Ferredoxin component of 36.2 63 0.0022 18.6 4.2 35 4-39 77-111 (121)
58 4aez_A CDC20, WD repeat-contai 35.6 1E+02 0.0035 20.9 8.4 51 2-58 114-166 (401)
59 1jmx_B Amine dehydrogenase; ox 35.5 90 0.0031 20.2 7.0 52 2-58 22-75 (349)
60 3u4y_A Uncharacterized protein 35.4 90 0.0031 20.2 6.0 50 2-58 21-72 (331)
61 1flg_A Protein (quinoprotein e 35.1 1.4E+02 0.0047 22.2 7.2 58 2-70 79-144 (582)
62 2pm7_B Protein transport prote 34.7 93 0.0032 20.1 7.0 21 33-58 67-87 (297)
63 2ynn_A Coatomer subunit beta'; 34.5 95 0.0032 20.2 7.4 50 2-58 209-260 (304)
64 3syx_A Sprouty-related, EVH1 d 34.3 72 0.0025 19.2 4.1 17 2-18 19-35 (130)
65 3odt_A Protein DOA1; ubiquitin 32.6 96 0.0033 19.6 7.7 49 2-58 206-256 (313)
66 2qpz_A Naphthalene 1,2-dioxyge 31.6 68 0.0023 17.7 4.2 34 4-38 68-101 (103)
67 2de6_D Ferredoxin component of 31.1 74 0.0025 18.1 3.8 36 4-40 70-105 (115)
68 2oiz_A Aromatic amine dehydrog 30.6 1.3E+02 0.0044 20.4 7.5 47 2-58 287-335 (361)
69 4e54_B DNA damage-binding prot 29.4 1.4E+02 0.0048 20.5 8.8 22 32-58 176-197 (435)
70 1yiq_A Quinohemoprotein alcoho 29.2 1.9E+02 0.0064 21.9 8.0 54 3-69 457-512 (689)
71 2jo6_A Nitrite reductase [NAD( 29.1 60 0.002 18.3 3.2 33 4-38 78-110 (113)
72 3bg1_A Protein SEC13 homolog; 27.9 1.3E+02 0.0044 19.7 7.8 52 2-58 36-91 (316)
73 3fm0_A Protein CIAO1; WDR39,SG 27.2 1.4E+02 0.0048 19.8 10.1 51 3-58 85-137 (345)
74 1fqt_A Rieske-type ferredoxin 26.6 91 0.0031 17.5 4.3 33 4-37 71-103 (112)
75 4aay_B AROB; oxidoreductase, r 26.1 99 0.0034 19.4 4.0 35 4-39 126-162 (175)
76 1vm9_A Toluene-4-monooxygenase 26.1 62 0.0021 18.2 2.8 32 4-37 68-99 (111)
77 2dg1_A DRP35, lactonase; beta 25.9 1.4E+02 0.0048 19.4 8.8 55 2-58 67-122 (333)
78 3dr2_A Exported gluconolactona 25.6 95 0.0033 20.2 4.1 53 3-58 171-225 (305)
79 3dm0_A Maltose-binding peripla 25.4 2.1E+02 0.0071 21.2 7.8 50 2-58 542-593 (694)
80 3c0d_A Putative nitrite reduct 25.3 43 0.0015 19.3 2.1 35 4-40 76-110 (119)
81 3jrp_A Fusion protein of prote 24.7 1.5E+02 0.0051 19.3 11.5 52 2-58 183-241 (379)
82 1g8k_B Arsenite oxidase; molyb 24.6 1.1E+02 0.0039 17.9 4.5 35 4-39 83-120 (133)
83 4aez_A CDC20, WD repeat-contai 24.2 1.7E+02 0.0058 19.8 7.3 50 2-58 285-337 (401)
84 3scy_A Hypothetical bacterial 23.9 1.6E+02 0.0055 19.4 8.6 60 3-72 31-94 (361)
85 2ad6_A Methanol dehydrogenase 23.9 2.2E+02 0.0075 21.0 10.4 58 2-70 74-142 (571)
86 3vgz_A Uncharacterized protein 23.5 1.6E+02 0.0053 19.1 8.2 50 2-58 70-121 (353)
87 3jro_A Fusion protein of prote 23.4 2.4E+02 0.0083 21.3 8.4 52 2-58 78-133 (753)
88 3mmy_A MRNA export factor; mRN 22.9 1.6E+02 0.0054 19.0 8.6 52 2-58 65-118 (368)
89 2i7f_A Ferredoxin component of 22.5 74 0.0025 17.7 2.7 34 4-38 69-102 (108)
90 3sjl_D Methylamine dehydrogena 21.6 2.2E+02 0.0075 20.1 6.0 50 2-58 312-364 (386)
91 4fmw_A RNA (guanine-9-)-methyl 21.4 48 0.0017 21.3 1.9 12 32-43 119-130 (197)
92 3azo_A Aminopeptidase; POP fam 21.4 2.1E+02 0.0072 20.8 5.6 61 2-72 218-282 (662)
93 4ery_A WD repeat-containing pr 20.8 1.7E+02 0.006 18.7 9.2 50 2-58 130-181 (312)
94 2ovr_B FBW7, F-BOX/WD repeat p 20.6 2.1E+02 0.0072 19.5 9.9 50 2-58 300-349 (445)
95 2lyd_A Decapping protein 1; DC 20.4 83 0.0028 18.9 2.7 15 2-16 39-53 (134)
No 1
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.89 E-value=5.5e-22 Score=138.02 Aligned_cols=106 Identities=16% Similarity=0.187 Sum_probs=95.3
Q ss_pred CeEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecC-CCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCcccc
Q psy11470 1 MSIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGR-DGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHG 79 (114)
Q Consensus 1 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~-~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~ 79 (114)
+++++||+.+++|+.++++|.+|..+++++++++|||+||. .....++++++||+.++ +|+.+++||.+|..
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~-------~W~~~~~~p~~r~~ 189 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKF-------EWKELAPMQTARSL 189 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTT-------EEEECCCCSSCCBS
T ss_pred ceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCC-------eEEECCCCCCchhc
Confidence 36899999999999999999999999999999999999998 45567899999999999 99999999999999
Q ss_pred eeeEEECC--eEEeccCCceeeccee-----cCCeEEeeeC
Q psy11470 80 LGKASLHI--YIQNVPEGLVYHKAMS-----SRKWRIVQVK 113 (114)
Q Consensus 80 ~~~~~~~~--yv~GG~~~~~~~~~~~-----~~~W~~~~~~ 113 (114)
|+++++++ |++||.+....++.++ +++|+.++++
T Consensus 190 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 230 (315)
T 4asc_A 190 FGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAF 230 (315)
T ss_dssp CEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCC
T ss_pred eEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCC
Confidence 99999999 9999987665555555 8899999865
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.88 E-value=1.4e-21 Score=135.04 Aligned_cols=105 Identities=28% Similarity=0.479 Sum_probs=95.9
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCccccee
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGLG 81 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~~ 81 (114)
++++||+.+++|..++++|.+|..+++++++++|||+||.......+++++||+.++ +|..+++||.+|..|+
T Consensus 31 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~-------~W~~~~~~p~~r~~~~ 103 (302)
T 2xn4_A 31 SVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKD-------QWTSVANMRDRRSTLG 103 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTT-------EEEEECCCSSCCBSCE
T ss_pred cEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCC-------ceeeCCCCCccccceE
Confidence 689999999999999999999999999999999999999987777899999999999 9999999999999999
Q ss_pred eEEECC--eEEeccCCceeeccee-----cCCeEEeeeC
Q psy11470 82 KASLHI--YIQNVPEGLVYHKAMS-----SRKWRIVQVK 113 (114)
Q Consensus 82 ~~~~~~--yv~GG~~~~~~~~~~~-----~~~W~~~~~~ 113 (114)
++++++ |++||..+...+++++ +++|+.+++|
T Consensus 104 ~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~ 142 (302)
T 2xn4_A 104 AAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPM 142 (302)
T ss_dssp EEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCC
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCC
Confidence 999999 9999987665566666 8899999875
No 3
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.87 E-value=2.9e-21 Score=134.12 Aligned_cols=105 Identities=26% Similarity=0.418 Sum_probs=95.3
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCccccee
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGLG 81 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~~ 81 (114)
++++||+.+++|+.++++|.+|..+++++++++|||+||.+.....+++++||+.++ +|..++++|.+|..++
T Consensus 185 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~-------~W~~~~~~p~~r~~~~ 257 (308)
T 1zgk_A 185 SAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETE-------TWTFVAPMKHRRSALG 257 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT-------EEEECCCCSSCCBSCE
T ss_pred eEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCC-------cEEECCCCCCCccceE
Confidence 689999999999999999999999999999999999999987677899999999999 9999999999999999
Q ss_pred eEEECC--eEEeccCCceeeccee-----cCCeEEeeeC
Q psy11470 82 KASLHI--YIQNVPEGLVYHKAMS-----SRKWRIVQVK 113 (114)
Q Consensus 82 ~~~~~~--yv~GG~~~~~~~~~~~-----~~~W~~~~~~ 113 (114)
++++++ |++||.++...+++++ +++|+.+++|
T Consensus 258 ~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 296 (308)
T 1zgk_A 258 ITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRM 296 (308)
T ss_dssp EEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEEC
T ss_pred EEEECCEEEEEcCcCCCcccceEEEEcCCCCEEeecCCC
Confidence 999998 9999987655455555 8899999876
No 4
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.87 E-value=1.8e-21 Score=134.71 Aligned_cols=105 Identities=24% Similarity=0.399 Sum_probs=94.8
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCccccee
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGLG 81 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~~ 81 (114)
++++||+.+++|+.++++|.+|..+++++++++||++||.+.....+++++||+.++ +|..++++|.+|..++
T Consensus 170 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~-------~W~~~~~~p~~r~~~~ 242 (306)
T 3ii7_A 170 SCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLN-------EWKMVSPMPWKGVTVK 242 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTT-------EEEECCCCSCCBSCCE
T ss_pred eEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCC-------cEEECCCCCCCcccee
Confidence 589999999999999999999999999999999999999877677899999999999 9999999999999999
Q ss_pred eEEECC--eEEeccCCceeeccee-----cCCeEEeeeC
Q psy11470 82 KASLHI--YIQNVPEGLVYHKAMS-----SRKWRIVQVK 113 (114)
Q Consensus 82 ~~~~~~--yv~GG~~~~~~~~~~~-----~~~W~~~~~~ 113 (114)
++++++ |++||.++...++.++ +++|+.+++|
T Consensus 243 ~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 281 (306)
T 3ii7_A 243 CAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKV 281 (306)
T ss_dssp EEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEE
T ss_pred EEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCc
Confidence 999988 9999987655555555 8899998764
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=99.87 E-value=3.7e-21 Score=133.58 Aligned_cols=106 Identities=27% Similarity=0.471 Sum_probs=95.1
Q ss_pred CeEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCcccce
Q psy11470 1 MSIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGL 80 (114)
Q Consensus 1 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~ 80 (114)
+++++||+.+++|+.++++|.+|..+++++++++||++||......++++++||+.++ +|..++++|.+|..+
T Consensus 137 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~-------~W~~~~~~p~~r~~~ 209 (308)
T 1zgk_A 137 NSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERN-------EWRMITAMNTIRSGA 209 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT-------EEEECCCCSSCCBSC
T ss_pred ccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCC-------eEeeCCCCCCccccc
Confidence 3689999999999999999999999999999999999999987667899999999999 999999999999999
Q ss_pred eeEEECC--eEEeccCCceeeccee-----cCCeEEeeeC
Q psy11470 81 GKASLHI--YIQNVPEGLVYHKAMS-----SRKWRIVQVK 113 (114)
Q Consensus 81 ~~~~~~~--yv~GG~~~~~~~~~~~-----~~~W~~~~~~ 113 (114)
+++++++ |++||.++...++.++ +++|+.++++
T Consensus 210 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 249 (308)
T 1zgk_A 210 GVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPM 249 (308)
T ss_dssp EEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCC
T ss_pred eEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCC
Confidence 9999988 9999987654455555 8899998765
No 6
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=99.87 E-value=2.2e-21 Score=134.28 Aligned_cols=105 Identities=24% Similarity=0.413 Sum_probs=94.1
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCC----cCeEEEEeCCCCcCCcccceeEEcCCCCCcc
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKT----VNTFEYLNTHSDMKDRIEVTWTSLPSMLTHR 77 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~----~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r 77 (114)
++++||+.+++|+.++++|.+|..+++++++++||++||...... .+++++||+.++ +|..++++|.+|
T Consensus 119 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~-------~W~~~~~~p~~r 191 (306)
T 3ii7_A 119 LFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATE-------TWTELCPMIEAR 191 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTT-------EEEEECCCSSCC
T ss_pred eEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCC-------eEEECCCccchh
Confidence 689999999999999999999999999999999999999865544 899999999999 999999999999
Q ss_pred cceeeEEECC--eEEeccCCceeeccee-----cCCeEEeeeC
Q psy11470 78 HGLGKASLHI--YIQNVPEGLVYHKAMS-----SRKWRIVQVK 113 (114)
Q Consensus 78 ~~~~~~~~~~--yv~GG~~~~~~~~~~~-----~~~W~~~~~~ 113 (114)
..++++++++ |++||.+....++.++ +++|+.++++
T Consensus 192 ~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 234 (306)
T 3ii7_A 192 KNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPM 234 (306)
T ss_dssp BSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCC
T ss_pred hcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCC
Confidence 9999999998 9999987655555555 8889998765
No 7
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.87 E-value=2.4e-21 Score=134.96 Aligned_cols=105 Identities=22% Similarity=0.304 Sum_probs=93.8
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCC-CCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCcccce
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRD-GLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGL 80 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~ 80 (114)
++++||+.+++|+.++++|.+|..+++++++++|||+||.. .....+++++||+.++ +|..++++|.+|..|
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~-------~W~~~~~~p~~r~~~ 200 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKG-------DWKDLAPMKTPRSMF 200 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTT-------EEEEECCCSSCCBSC
T ss_pred eEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCC-------EEEECCCCCCCcccc
Confidence 58999999999999999999999999999999999999984 3456899999999999 999999999999999
Q ss_pred eeEEECC--eEEeccCCceeeccee-----cCCeEEeeeC
Q psy11470 81 GKASLHI--YIQNVPEGLVYHKAMS-----SRKWRIVQVK 113 (114)
Q Consensus 81 ~~~~~~~--yv~GG~~~~~~~~~~~-----~~~W~~~~~~ 113 (114)
+++++++ |++||.+....++.++ +++|+.++++
T Consensus 201 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 240 (318)
T 2woz_A 201 GVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEF 240 (318)
T ss_dssp EEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCC
T ss_pred eEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCC
Confidence 9999999 9999987655555555 8899998765
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=99.87 E-value=4.1e-21 Score=132.69 Aligned_cols=103 Identities=25% Similarity=0.505 Sum_probs=93.3
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCccccee
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGLG 81 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~~ 81 (114)
++++||+.+++|+.++++|.+|..+++++++++||++||.+.....+++++||+.++ +|..++++|.+|..++
T Consensus 174 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~-------~W~~~~~~~~~r~~~~ 246 (302)
T 2xn4_A 174 TVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTN-------AWRQVADMNMCRRNAG 246 (302)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTT-------EEEEECCCSSCCBSCE
T ss_pred EEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCC-------CEeeCCCCCCccccCe
Confidence 589999999999999999999999999999999999999987667899999999999 9999999999999999
Q ss_pred eEEECC--eEEeccCCceeeccee-----cCCeEEee
Q psy11470 82 KASLHI--YIQNVPEGLVYHKAMS-----SRKWRIVQ 111 (114)
Q Consensus 82 ~~~~~~--yv~GG~~~~~~~~~~~-----~~~W~~~~ 111 (114)
++++++ |++||.++...+++++ +++|+.++
T Consensus 247 ~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 283 (302)
T 2xn4_A 247 VCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVS 283 (302)
T ss_dssp EEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECS
T ss_pred EEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECC
Confidence 999998 9999987654455555 88999986
No 9
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.87 E-value=3.7e-21 Score=132.68 Aligned_cols=106 Identities=28% Similarity=0.527 Sum_probs=95.0
Q ss_pred CeEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCcccce
Q psy11470 1 MSIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGL 80 (114)
Q Consensus 1 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~ 80 (114)
+++++||+.+++|+.++++|.+|..+++++++++||++||.+.....+++++||+.++ +|..++++|.+|..+
T Consensus 128 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~-------~W~~~~~~p~~r~~~ 200 (301)
T 2vpj_A 128 TSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTG-------HWTNVTPMATKRSGA 200 (301)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT-------EEEEECCCSSCCBSC
T ss_pred ceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCC-------cEEeCCCCCcccccc
Confidence 3689999999999999999999999999999999999999987778899999999999 999999999999999
Q ss_pred eeEEECC--eEEeccCCceeeccee-----cCCeEEeeeC
Q psy11470 81 GKASLHI--YIQNVPEGLVYHKAMS-----SRKWRIVQVK 113 (114)
Q Consensus 81 ~~~~~~~--yv~GG~~~~~~~~~~~-----~~~W~~~~~~ 113 (114)
+++++++ |++||.+.....+.++ +++|+.++++
T Consensus 201 ~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 240 (301)
T 2vpj_A 201 GVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSM 240 (301)
T ss_dssp EEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCC
T ss_pred eEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCC
Confidence 9999999 9999987654455555 8899998765
No 10
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=99.87 E-value=5.2e-21 Score=131.97 Aligned_cols=106 Identities=28% Similarity=0.482 Sum_probs=94.9
Q ss_pred CeEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCcccce
Q psy11470 1 MSIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGL 80 (114)
Q Consensus 1 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~ 80 (114)
+++++||+.+++|+.++++|.+|..+++++++++||++||.+.....+++++||+.++ +|..++++|.+|..+
T Consensus 175 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~-------~W~~~~~~p~~r~~~ 247 (301)
T 2vpj_A 175 NSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTD-------SWTTVTSMTTPRCYV 247 (301)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTT-------EEEEECCCSSCCBSC
T ss_pred ceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCC-------cEEECCCCCCcccce
Confidence 3689999999999999999999999999999999999999987667899999999999 999999999999999
Q ss_pred eeEEECC--eEEeccCCceeeccee-----cCCeEEeeeC
Q psy11470 81 GKASLHI--YIQNVPEGLVYHKAMS-----SRKWRIVQVK 113 (114)
Q Consensus 81 ~~~~~~~--yv~GG~~~~~~~~~~~-----~~~W~~~~~~ 113 (114)
+++++++ |++||.+....++.++ +++|+.+++|
T Consensus 248 ~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 287 (301)
T 2vpj_A 248 GATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSM 287 (301)
T ss_dssp EEEEETTEEEEECCBCSSSBEEEEEEEETTTTEEEEEEEE
T ss_pred eEEEECCEEEEEcCcCCCcccccEEEEcCCCCeEEEcCCC
Confidence 9999988 9999987655445555 7899998765
No 11
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=99.87 E-value=3.2e-21 Score=134.13 Aligned_cols=105 Identities=19% Similarity=0.235 Sum_probs=93.3
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCC---CCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCccc
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRD---GLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRH 78 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~ 78 (114)
++++||+.+++|+.++++|.+|..+++++++++|||+||.. .....+++++||+.++ +|+.++++|.+|.
T Consensus 68 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~-------~W~~~~~~p~~r~ 140 (315)
T 4asc_A 68 YFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSF-------KWGESDPLPYVVY 140 (315)
T ss_dssp EEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTT-------EEEECCCCSSCCB
T ss_pred ceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCC-------cEeECCCCCCccc
Confidence 48999999999999999999999999999999999999974 3567899999999999 9999999999999
Q ss_pred ceeeEEECC--eEEecc-CCceeeccee-----cCCeEEeeeC
Q psy11470 79 GLGKASLHI--YIQNVP-EGLVYHKAMS-----SRKWRIVQVK 113 (114)
Q Consensus 79 ~~~~~~~~~--yv~GG~-~~~~~~~~~~-----~~~W~~~~~~ 113 (114)
.|+++++++ |++||. .....+++++ +++|+.+++|
T Consensus 141 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~ 183 (315)
T 4asc_A 141 GHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPM 183 (315)
T ss_dssp SCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCC
T ss_pred ceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCC
Confidence 999999999 999998 4444455555 8899999875
No 12
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=99.85 E-value=9.9e-21 Score=131.81 Aligned_cols=104 Identities=15% Similarity=0.251 Sum_probs=91.6
Q ss_pred EEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCC--CCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCcccce
Q psy11470 3 IEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRD--GLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGL 80 (114)
Q Consensus 3 ~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~ 80 (114)
+++||+.+++|+.++++|.+|..+++++++++|||+||.. ....++++++||+.++ +|+.++++|.+|..|
T Consensus 80 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~-------~W~~~~~~p~~r~~~ 152 (318)
T 2woz_A 80 FFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAA-------KWSEVKNLPIKVYGH 152 (318)
T ss_dssp EEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTT-------EEEEECCCSSCEESC
T ss_pred EEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCC-------CEeECCCCCCccccc
Confidence 8999999999999999999999999999999999999985 3456889999999999 999999999999999
Q ss_pred eeEEECC--eEEeccCC-ceeeccee-----cCCeEEeeeC
Q psy11470 81 GKASLHI--YIQNVPEG-LVYHKAMS-----SRKWRIVQVK 113 (114)
Q Consensus 81 ~~~~~~~--yv~GG~~~-~~~~~~~~-----~~~W~~~~~~ 113 (114)
+++++++ |++||... ...+++++ +++|+.+++|
T Consensus 153 ~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~ 193 (318)
T 2woz_A 153 NVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM 193 (318)
T ss_dssp EEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC
T ss_pred EEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC
Confidence 9999988 99999742 23345555 8899998765
No 13
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.81 E-value=2.5e-19 Score=126.22 Aligned_cols=87 Identities=17% Similarity=0.262 Sum_probs=78.1
Q ss_pred eEEEEECC--CCcEEEecCCc-ccccceeEEEECCEEEEEecC-C----CCCCcCeEEEEeCCCCcCCcccceeEEcCCC
Q psy11470 2 SIEVFEIR--ANTWTEIGHLR-NRRLQFGAEVLNGKIHVVGGR-D----GLKTVNTFEYLNTHSDMKDRIEVTWTSLPSM 73 (114)
Q Consensus 2 ~~~~yd~~--~~~W~~~~~~~-~~~~~~~~~~~~~~iyv~GG~-~----~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~ 73 (114)
++++||+. +++|+.++++| .+|..+++++++++|||+||. . ....++++++||+.++ +|..+++|
T Consensus 32 ~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~-------~W~~~~~~ 104 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN-------SWVKLMSH 104 (357)
T ss_dssp CEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTT-------EEEECSCC
T ss_pred eEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCC-------cEEECCCC
Confidence 68999998 49999999999 899999999999999999998 2 2346899999999999 99999998
Q ss_pred C-CcccceeeEEECC--eEEeccCC
Q psy11470 74 L-THRHGLGKASLHI--YIQNVPEG 95 (114)
Q Consensus 74 ~-~~r~~~~~~~~~~--yv~GG~~~ 95 (114)
+ .+|..++++++++ |++||.+.
T Consensus 105 ~p~~r~~~~~~~~~~~iyv~GG~~~ 129 (357)
T 2uvk_A 105 APMGMAGHVTFVHNGKAYVTGGVNQ 129 (357)
T ss_dssp CSSCCSSEEEEEETTEEEEEECCCH
T ss_pred CCcccccceEEEECCEEEEEeCcCC
Confidence 8 8999999999888 99999764
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.80 E-value=8.1e-19 Score=134.01 Aligned_cols=103 Identities=17% Similarity=0.175 Sum_probs=90.5
Q ss_pred CeEEEEECCCCcEEEec-C-----CcccccceeEEEE--CCEEEEEecCCCCC-CcCeEEEEeCCCCcCCcccceeEEcC
Q psy11470 1 MSIEVFEIRANTWTEIG-H-----LRNRRLQFGAEVL--NGKIHVVGGRDGLK-TVNTFEYLNTHSDMKDRIEVTWTSLP 71 (114)
Q Consensus 1 ~~~~~yd~~~~~W~~~~-~-----~~~~~~~~~~~~~--~~~iyv~GG~~~~~-~~~~~~~~d~~t~~~~~~~~~W~~~~ 71 (114)
+++++||+.+++|+.++ + +|.+|..|+++++ +++|||+||..... .++++++||+.++ +|+.++
T Consensus 412 ~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~-------~W~~~~ 484 (695)
T 2zwa_A 412 NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTR-------EWSMIK 484 (695)
T ss_dssp CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTT-------EEEECC
T ss_pred CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCC-------cEEECC
Confidence 36899999999999998 5 7889999999999 99999999997544 7899999999999 999999
Q ss_pred CCCCcccceeeEEE-CC--eEEeccCCceeeccee-----cCCeEEeeeC
Q psy11470 72 SMLTHRHGLGKASL-HI--YIQNVPEGLVYHKAMS-----SRKWRIVQVK 113 (114)
Q Consensus 72 ~~~~~r~~~~~~~~-~~--yv~GG~~~~~~~~~~~-----~~~W~~~~~~ 113 (114)
+||.+|..|+++++ ++ |++||.+... +++ +++|+.+++.
T Consensus 485 ~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~ 531 (695)
T 2zwa_A 485 SLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPK 531 (695)
T ss_dssp CCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCS
T ss_pred CCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCC
Confidence 99999999999997 77 9999986544 333 8899998864
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=99.79 E-value=8.6e-19 Score=123.45 Aligned_cols=106 Identities=13% Similarity=0.116 Sum_probs=85.8
Q ss_pred CeEEEEECCCCcEEEecCCc-ccccceeEEEECCEEEEEecCCCC----------------------------------C
Q psy11470 1 MSIEVFEIRANTWTEIGHLR-NRRLQFGAEVLNGKIHVVGGRDGL----------------------------------K 45 (114)
Q Consensus 1 ~~~~~yd~~~~~W~~~~~~~-~~~~~~~~~~~~~~iyv~GG~~~~----------------------------------~ 45 (114)
+++++||+.+++|+++++++ .+|..+++++++++|||+||.+.. .
T Consensus 86 ~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 2uvk_A 86 NDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYF 165 (357)
T ss_dssp CCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGC
T ss_pred ccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccC
Confidence 36899999999999999987 889999999999999999998642 2
Q ss_pred CcCeEEEEeCCCCcCCcccceeEEcCCCCCcccc-eeeEEECC--eEEeccCCce-eecce-------ecCCeEEeeeC
Q psy11470 46 TVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHG-LGKASLHI--YIQNVPEGLV-YHKAM-------SSRKWRIVQVK 113 (114)
Q Consensus 46 ~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~-~~~~~~~~--yv~GG~~~~~-~~~~~-------~~~~W~~~~~~ 113 (114)
.++++++||+.++ +|+.++++|.+|.. ++++++++ |++||..... ....+ ++++|+.+++|
T Consensus 166 ~~~~v~~yd~~~~-------~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~ 237 (357)
T 2uvk_A 166 FNKFLLSFDPSTQ-------QWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPV 237 (357)
T ss_dssp CCCEEEEEETTTT-------EEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCS
T ss_pred CcccEEEEeCCCC-------cEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCC
Confidence 4689999999999 99999999987655 88888888 9999964321 12222 27889998765
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.73 E-value=3.2e-17 Score=125.27 Aligned_cols=102 Identities=12% Similarity=0.147 Sum_probs=86.7
Q ss_pred CeEEEEECCCCcEEEecCCcccccceeEEEE-CCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCC---CCCc
Q psy11470 1 MSIEVFEIRANTWTEIGHLRNRRLQFGAEVL-NGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPS---MLTH 76 (114)
Q Consensus 1 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~---~~~~ 76 (114)
+++++||+.+++|+.++++|.+|..|+++++ +++|||+||.+... ++++||+.++ +|..+++ +|.+
T Consensus 468 ~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~-------~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 468 SDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEE-------IFKDVTPKDEFFQN 537 (695)
T ss_dssp CCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTT-------EEEECCCSSGGGGS
T ss_pred ccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCC-------ceEEccCCCCCCCc
Confidence 3689999999999999999999999999997 99999999987544 9999999999 9999987 8899
Q ss_pred ccceeeEEEC---C--eEEeccCCc--eeeccee-----cCC------eEEeee
Q psy11470 77 RHGLGKASLH---I--YIQNVPEGL--VYHKAMS-----SRK------WRIVQV 112 (114)
Q Consensus 77 r~~~~~~~~~---~--yv~GG~~~~--~~~~~~~-----~~~------W~~~~~ 112 (114)
|..|++++++ + |++||.... ..+++++ +++ |+.+++
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 9999988876 6 999998432 3344444 777 888765
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.66 E-value=1.4e-16 Score=120.57 Aligned_cols=99 Identities=20% Similarity=0.279 Sum_probs=81.8
Q ss_pred eEEEEECCCCcEEEecCCccccccee--EEE-ECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCccc
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFG--AEV-LNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRH 78 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~--~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~ 78 (114)
++++||+.+++|+.++.+|.+|..++ ++. .+++||++||.... ++++||+.++ +|..+++|+.+|.
T Consensus 220 ~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~-------~W~~~~~~~~~R~ 288 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSD-------SWIPGPDMQVARG 288 (656)
T ss_dssp EEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGT-------EEEECCCCSSCCS
T ss_pred EEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCC-------ceeECCCCCcccc
Confidence 57899999999999988888776654 333 48999999997642 7999999999 9999999999999
Q ss_pred ceeeEEE-CC--eEEec-cCCceeeccee-----cCCeEEee
Q psy11470 79 GLGKASL-HI--YIQNV-PEGLVYHKAMS-----SRKWRIVQ 111 (114)
Q Consensus 79 ~~~~~~~-~~--yv~GG-~~~~~~~~~~~-----~~~W~~~~ 111 (114)
.|+++++ ++ |++|| .++...+++++ +++|+.++
T Consensus 289 ~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~ 330 (656)
T 1k3i_A 289 YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLP 330 (656)
T ss_dssp SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEET
T ss_pred ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCC
Confidence 9999999 66 99999 44444455555 78899973
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.52 E-value=3.2e-14 Score=107.68 Aligned_cols=85 Identities=20% Similarity=0.065 Sum_probs=75.5
Q ss_pred eEEEEECCCCcEEEec--CCcccccceeEEEE-CCEEEEEecCCC------CCCcCeEEEEeCCCCcCCcccceeEEcCC
Q psy11470 2 SIEVFEIRANTWTEIG--HLRNRRLQFGAEVL-NGKIHVVGGRDG------LKTVNTFEYLNTHSDMKDRIEVTWTSLPS 72 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~-~~~iyv~GG~~~------~~~~~~~~~~d~~t~~~~~~~~~W~~~~~ 72 (114)
++++||+.++.|..+. .||.+|..+.++++ +++|||+||.+. ...+.++++||+.++ +|..+++
T Consensus 433 ~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~-------~W~~~~~ 505 (656)
T 1k3i_A 433 IITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQD-------TFYKQNP 505 (656)
T ss_dssp EEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGT-------EEEECCC
T ss_pred EEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCC-------ceeecCC
Confidence 5789999999999986 89999999998888 999999999752 345789999999999 9999999
Q ss_pred CCCcccceeeEEE--CC--eEEecc
Q psy11470 73 MLTHRHGLGKASL--HI--YIQNVP 93 (114)
Q Consensus 73 ~~~~r~~~~~~~~--~~--yv~GG~ 93 (114)
++.+|..|+++++ ++ |++||.
T Consensus 506 ~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 506 NSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CCCccccccHhhcCCCcEEEecCCC
Confidence 9999999998877 66 999985
No 19
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.01 E-value=0.3 Score=32.86 Aligned_cols=53 Identities=4% Similarity=-0.055 Sum_probs=40.4
Q ss_pred CeEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 1 MSIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 1 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
|++.++|+.+.+=..-..++....+.+++..+++||+... ..+.+.+||+.+-
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw-----~~~~v~v~D~~tl 95 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTW-----RNHEGFVYDLATL 95 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEES-----SSSEEEEEETTTT
T ss_pred ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEe-----eCCEEEEEECCcC
Confidence 4688999999887665555555556677888999999753 2468999999888
No 20
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.15 E-value=0.35 Score=32.97 Aligned_cols=52 Identities=17% Similarity=-0.016 Sum_probs=37.8
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
++.++|+.+.+=..-..++..-.+.+++..+++||+.-. ..+.+.+||+.+.
T Consensus 66 ~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw-----~~~~v~v~D~~t~ 117 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW-----KNGLGFVWNIRNL 117 (262)
T ss_dssp EEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES-----SSSEEEEEETTTC
T ss_pred eEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe-----eCCEEEEEECccC
Confidence 578899999886554444443344557778999999743 3468999999888
No 21
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=91.95 E-value=1.6 Score=29.62 Aligned_cols=53 Identities=15% Similarity=0.084 Sum_probs=36.6
Q ss_pred CeEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 1 MSIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 1 ~~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
+++.++|+.+++=..--+++....+.+.+..++.||+.. ...+.+.+||+.+.
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t-----~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVV-----WLKNIGFIYDRRTL 96 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEE-----TTCSEEEEEETTTT
T ss_pred CEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEE-----ecCCEEEEEECCCC
Confidence 357889999888554433333334445666788999974 24568999999887
No 22
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=86.19 E-value=5.8 Score=26.56 Aligned_cols=72 Identities=11% Similarity=0.132 Sum_probs=45.9
Q ss_pred EEEecCCcccccce--eEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCcccceeeEEECC--e
Q psy11470 13 WTEIGHLRNRRLQF--GAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGLGKASLHI--Y 88 (114)
Q Consensus 13 W~~~~~~~~~~~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~--y 88 (114)
.+.+...|.....| +....++.+|+..|..+ .+.+.++|+.+. +-..-.+++......+.+..++ |
T Consensus 9 ~~v~~~~phd~~~ftqGL~~~~~~LyestG~~g---~S~v~~vD~~tg-------kv~~~~~l~~~~fgeGi~~~~~~ly 78 (243)
T 3mbr_X 9 YRVVKRYPHDTTAFTEGLFYLRGHLYESTGETG---RSSVRKVDLETG-------RILQRAEVPPPYFGAGIVAWRDRLI 78 (243)
T ss_dssp EEEEEEEECCTTCCEEEEEEETTEEEEEECCTT---SCEEEEEETTTC-------CEEEEEECCTTCCEEEEEEETTEEE
T ss_pred eEEEEEcCCCCccccccEEEECCEEEEECCCCC---CceEEEEECCCC-------CEEEEEeCCCCcceeEEEEeCCEEE
Confidence 33444445544444 66667899999887543 467889999999 6555445554445556666666 7
Q ss_pred EEeccC
Q psy11470 89 IQNVPE 94 (114)
Q Consensus 89 v~GG~~ 94 (114)
++...+
T Consensus 79 ~ltw~~ 84 (243)
T 3mbr_X 79 QLTWRN 84 (243)
T ss_dssp EEESSS
T ss_pred EEEeeC
Confidence 776444
No 23
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=85.61 E-value=1.7 Score=29.73 Aligned_cols=50 Identities=4% Similarity=-0.104 Sum_probs=33.6
Q ss_pred EEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 3 IEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 3 ~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
+.++|+.+.+=..-. ++..-.+.+++..+++||+... ..+.+.+||+.+.
T Consensus 77 v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw-----~~~~v~V~D~~Tl 126 (268)
T 3nok_A 77 LRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTW-----TEGLLFTWSGMPP 126 (268)
T ss_dssp EEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEES-----SSCEEEEEETTTT
T ss_pred EEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEc-----cCCEEEEEECCcC
Confidence 567788877643322 4433334456777899999743 3568999999988
No 24
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=80.16 E-value=12 Score=25.87 Aligned_cols=52 Identities=8% Similarity=0.160 Sum_probs=34.0
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
+|..+|..+.....+..+..+.....++.+ ++.+++.|+.+ ..+.+||..+.
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~ 179 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQ 179 (420)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTT
T ss_pred EEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCC
Confidence 578899998887666544433323333333 67777888654 46888898887
No 25
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=76.64 E-value=13 Score=25.24 Aligned_cols=72 Identities=11% Similarity=0.009 Sum_probs=42.3
Q ss_pred EEEecCCcccccc--eeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCcccceeeEEECC--e
Q psy11470 13 WTEIGHLRNRRLQ--FGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGLGKASLHI--Y 88 (114)
Q Consensus 13 W~~~~~~~~~~~~--~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~--y 88 (114)
++.+...|..... .+....++.||+..|..+ .+.+.++|+.+. +-..-.+++......+.+..++ |
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~~~~LyestG~~g---~S~v~~vD~~Tg-------kv~~~~~l~~~~FgeGit~~g~~ly 100 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYRNGYFYESTGLNG---RSSIRKVDIESG-------KTLQQIELGKRYFGEGISDWKDKIV 100 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEETTEEEEEEEETT---EEEEEEECTTTC-------CEEEEEECCTTCCEEEEEEETTEEE
T ss_pred eEEEEEecCCCCcccceEEEECCEEEEECCCCC---CceEEEEECCCC-------cEEEEEecCCccceeEEEEeCCEEE
Confidence 3444444544444 344445899999877532 357889999999 5443334443333344566666 7
Q ss_pred EEeccC
Q psy11470 89 IQNVPE 94 (114)
Q Consensus 89 v~GG~~ 94 (114)
++...+
T Consensus 101 ~ltw~~ 106 (262)
T 3nol_A 101 GLTWKN 106 (262)
T ss_dssp EEESSS
T ss_pred EEEeeC
Confidence 776444
No 26
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=75.87 E-value=15 Score=24.43 Aligned_cols=52 Identities=15% Similarity=0.268 Sum_probs=31.8
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||..+..+..+..+...........+ ++.+++.|+.+ ..+.+||..+.
T Consensus 31 ~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~ 84 (372)
T 1k8k_C 31 EVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGR 84 (372)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETT
T ss_pred EEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCC
Confidence 467888888876655544433333223333 56666777643 46788888887
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=74.77 E-value=17 Score=24.52 Aligned_cols=54 Identities=4% Similarity=-0.050 Sum_probs=31.8
Q ss_pred eEEEEECCCCcEEEecCC-cccccceeEEE-ECCEEEEEecCCCCC-----CcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHL-RNRRLQFGAEV-LNGKIHVVGGRDGLK-----TVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~-~~~~~~~~~~~-~~~~iyv~GG~~~~~-----~~~~~~~~d~~t~ 58 (114)
.+.++|+.+.+....-.. ..| ..++. -++++|+..--.... ..+.+.++|+.+.
T Consensus 153 ~v~viD~~t~~~~~~i~~g~~p---~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~ 213 (328)
T 3dsm_A 153 RILKIDTETDKVVDELTIGIQP---TSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETF 213 (328)
T ss_dssp EEEEEETTTTEEEEEEECSSCB---CCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTT
T ss_pred EEEEEECCCCeEEEEEEcCCCc---cceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCC
Confidence 578999998876543221 122 22222 368888875321111 1378999999988
No 28
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=73.62 E-value=18 Score=24.50 Aligned_cols=50 Identities=20% Similarity=0.371 Sum_probs=30.3
Q ss_pred eEEEEECCCCc--EEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCc
Q psy11470 2 SIEVFEIRANT--WTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDM 59 (114)
Q Consensus 2 ~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~ 59 (114)
.+.+||+.+.+ |+.-. ++. +.....+..++.||+.. ....+.++|+.+.+
T Consensus 288 ~l~~~d~~tG~~~w~~~~-~~~-~~~~~~~~~~~~l~v~~------~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 288 RVMALTIDGGVTLWTQSD-LLH-RLLTSPVLYNGNLVVGD------SEGYLHWINVEDGR 339 (376)
T ss_dssp CEEEEETTTCCEEEEECT-TTT-SCCCCCEEETTEEEEEC------TTSEEEEEETTTCC
T ss_pred eEEEEECCCCcEEEeecc-cCC-CcccCCEEECCEEEEEe------CCCeEEEEECCCCc
Confidence 46788887766 65431 111 22223445688888742 23478999998883
No 29
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=71.58 E-value=10 Score=25.52 Aligned_cols=52 Identities=13% Similarity=0.208 Sum_probs=29.3
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||..+..|..+..+...........+ ++.+++.|+.+ ..+.+||..+.
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~ 87 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPD 87 (377)
T ss_dssp CBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC-----
T ss_pred EEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCC
Confidence 466788888877777666544333333444 56677777653 35777887776
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=71.52 E-value=20 Score=24.08 Aligned_cols=49 Identities=6% Similarity=-0.014 Sum_probs=31.3
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.++|+.+.+....-.++........+.- ++.+|+..+ .+.++|+.+.
T Consensus 204 ~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~~t~ 254 (328)
T 3dsm_A 204 SLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--------DIWRMPVEAD 254 (328)
T ss_dssp EEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--------SEEEEETTCS
T ss_pred eEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--------EEEEEECCCC
Confidence 488999998876543333322223344444 567888532 7889999888
No 31
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=66.74 E-value=25 Score=23.25 Aligned_cols=59 Identities=17% Similarity=0.246 Sum_probs=34.6
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--C--CEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--N--GKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPS 72 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~ 72 (114)
.+.+||....++..+..+...........+ + +.+++.|+.+ ..+.+||..+. +|..+..
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~-------~~~~~~~ 96 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENG-------RWSQIAV 96 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETT-------EEEEEEE
T ss_pred cEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCC-------ceeEeee
Confidence 366777766666555444333333333333 2 5677777654 46788888888 7655543
No 32
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=64.90 E-value=38 Score=25.78 Aligned_cols=59 Identities=17% Similarity=0.246 Sum_probs=36.3
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--C--CEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--N--GKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPS 72 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~ 72 (114)
.|.+||....++..+..+...........+ + +.+++.|+.+ ..+.+||..+. ++..+..
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~~-------~~~~~~~ 94 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENG-------RWSQIAV 94 (753)
T ss_dssp EEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEETT-------EEEEEEE
T ss_pred cEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCCC-------ccccccc
Confidence 467788776677666554433333333443 3 6677777654 46788888888 7655543
No 33
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=55.63 E-value=48 Score=22.89 Aligned_cols=50 Identities=16% Similarity=0.304 Sum_probs=28.4
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||..+..-... +........+..+++.+++.|+.+ ..+.+||..+.
T Consensus 277 ~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~g~~d-----g~i~iwd~~~~ 326 (435)
T 1p22_A 277 TIKVWNTSTCEFVRT--LNGHKRGIACLQYRDRLVVSGSSD-----NTIRLWDIECG 326 (435)
T ss_dssp EEEEEETTTCCEEEE--EECCSSCEEEEEEETTEEEEEETT-----SCEEEEETTTC
T ss_pred eEEEEECCcCcEEEE--EcCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCCC
Confidence 467788777653222 121222233444466677777653 46888898877
No 34
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=55.16 E-value=35 Score=23.19 Aligned_cols=55 Identities=24% Similarity=0.176 Sum_probs=33.2
Q ss_pred eEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCcccceeeEEECC--eEEeccC
Q psy11470 27 GAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGLGKASLHI--YIQNVPE 94 (114)
Q Consensus 27 ~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~--yv~GG~~ 94 (114)
+....++.||+..|..+ .+.++|+.+. +-..-. ++......+.+..++ |++...+
T Consensus 59 GL~~~~~~Ly~stG~~g-----~v~~iD~~Tg-------kv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~ 115 (268)
T 3nok_A 59 GLVFHQGHFFESTGHQG-----TLRQLSLESA-------QPVWME-RLGNIFAEGLASDGERLYQLTWTE 115 (268)
T ss_dssp EEEEETTEEEEEETTTT-----EEEECCSSCS-------SCSEEE-ECTTCCEEEEEECSSCEEEEESSS
T ss_pred eEEEECCEEEEEcCCCC-----EEEEEECCCC-------cEEeEE-CCCCcceeEEEEeCCEEEEEEccC
Confidence 44555899999887643 2888999988 432211 443323344555555 7776444
No 35
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=54.98 E-value=39 Score=22.36 Aligned_cols=53 Identities=11% Similarity=0.005 Sum_probs=30.5
Q ss_pred EEEEECCCCcEEEecCCcccccceeEE-EECCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 3 IEVFEIRANTWTEIGHLRNRRLQFGAE-VLNGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 3 ~~~yd~~~~~W~~~~~~~~~~~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
++.+|..+.+...+...........++ .-+++||+.... .....+.+||..+.
T Consensus 20 v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~---~~~~~v~~~~~~~g 73 (347)
T 3hfq_A 20 QGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKE---DDEGGIAAWQIDGQ 73 (347)
T ss_dssp EEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEE---TTEEEEEEEEEETT
T ss_pred EEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEec---CCCceEEEEEecCC
Confidence 567788888887654322222122222 237788876532 12357888988777
No 36
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=54.72 E-value=51 Score=22.90 Aligned_cols=58 Identities=16% Similarity=0.204 Sum_probs=41.7
Q ss_pred EECCEEEEEecCCCCC--CcCeEEEEeC-CCCcCCcccceeEEcCCCCCcccceeeEEECC-eEEeccC
Q psy11470 30 VLNGKIHVVGGRDGLK--TVNTFEYLNT-HSDMKDRIEVTWTSLPSMLTHRHGLGKASLHI-YIQNVPE 94 (114)
Q Consensus 30 ~~~~~iyv~GG~~~~~--~~~~~~~~d~-~t~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~-yv~GG~~ 94 (114)
..+++.++.|-..... ..+.|..|.- ..+ .|..++.+--...-.=.+.+++ .++||..
T Consensus 38 ~~~Gk~~I~GRVE~Rd~se~S~V~fFeet~~d-------~w~~v~~~~~~LqDPF~t~I~gEli~GGve 99 (315)
T 2b4w_A 38 SYKGKTHIYGRVEKRDIWAASHVRLFEETGKD-------EFTAVPELSWELEDPYIAKINNEMIFGGTR 99 (315)
T ss_dssp EETTEEEEEEEEECTTCSSCCEEEEEEEEETT-------EEEECTTCCBSCEEEEEEEETTEEEEEEEE
T ss_pred eECCEEEEEeeeecCCCccccEEEEEEEcCCC-------ceEECCCCEEEecCccEEEECCEEEeeeEE
Confidence 3578998888654433 3477877775 677 9999988444566666777888 9999963
No 37
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=54.11 E-value=47 Score=22.38 Aligned_cols=58 Identities=16% Similarity=0.220 Sum_probs=35.5
Q ss_pred eEEEEECCCCc--EEEecCCc-------ccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEc
Q psy11470 2 SIEVFEIRANT--WTEIGHLR-------NRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSL 70 (114)
Q Consensus 2 ~~~~yd~~~~~--W~~~~~~~-------~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~ 70 (114)
.+.+||+.+.+ |+.-.... ........+..++.||+... ...+.++|..+.+. .|..-
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------~g~l~a~d~~tG~~-----~W~~~ 130 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE------KAQVYALNTSDGTV-----AWQTK 130 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET------TSEEEEEETTTCCE-----EEEEE
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC------CCEEEEEECCCCCE-----EEEEe
Confidence 47899987655 76543211 11222344556889988532 25789999988743 58654
No 38
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=53.76 E-value=41 Score=21.57 Aligned_cols=52 Identities=8% Similarity=0.160 Sum_probs=31.9
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
+|.++|..+.+..+.-.+..+.....++.+ +++.++.|+.+ ..+.++|..+.
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~ 99 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQ 99 (318)
T ss_dssp EEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTT
T ss_pred EEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCc
Confidence 577889888876655433332222223333 66777777654 46778888777
No 39
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=53.19 E-value=48 Score=22.22 Aligned_cols=72 Identities=10% Similarity=0.035 Sum_probs=41.5
Q ss_pred EEEecCCcccccc--eeEEEEC-CEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCcccceeeEEECC--
Q psy11470 13 WTEIGHLRNRRLQ--FGAEVLN-GKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGLGKASLHI-- 87 (114)
Q Consensus 13 W~~~~~~~~~~~~--~~~~~~~-~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~~~~~~~~-- 87 (114)
.+.+...|.+... ++.+..+ +.+|+..|.. ..+.+.++|+.+. +-..-.+++......+++..++
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~---~~s~v~~iD~~tg-------~v~~~i~l~~~~fgeGi~~~g~~l 78 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLY---GRSSVRQVALQTG-------KVENIHKMDDSYFGEGLTLLNEKL 78 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECST---TTCEEEEEETTTC-------CEEEEEECCTTCCEEEEEEETTEE
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCC---CCCEEEEEECCCC-------CEEEEEecCCCcceEEEEEeCCEE
Confidence 4444455554332 4555554 8999976632 2468999999999 5444333333333345555666
Q ss_pred eEEeccC
Q psy11470 88 YIQNVPE 94 (114)
Q Consensus 88 yv~GG~~ 94 (114)
|+..-.+
T Consensus 79 yv~t~~~ 85 (266)
T 2iwa_A 79 YQVVWLK 85 (266)
T ss_dssp EEEETTC
T ss_pred EEEEecC
Confidence 7766433
No 40
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=50.33 E-value=81 Score=23.97 Aligned_cols=78 Identities=13% Similarity=0.020 Sum_probs=43.9
Q ss_pred EEEECCCCcEEEecC---CcccccceeEEEE-CCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCC---CCCc
Q psy11470 4 EVFEIRANTWTEIGH---LRNRRLQFGAEVL-NGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPS---MLTH 76 (114)
Q Consensus 4 ~~yd~~~~~W~~~~~---~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~---~~~~ 76 (114)
.+||+.+.++..... +|.... .+++.- ++.|++.+ .+-+.+||+.+. ++..... ++..
T Consensus 562 ~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t-------~~Gl~~~~~~~~-------~~~~~~~~dGl~~~ 626 (781)
T 3v9f_A 562 CFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWAST-------NTGISCYITSKK-------CFYTYDHSNNIPQG 626 (781)
T ss_dssp EESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEEC-------SSCEEEEETTTT-------EEEEECGGGTCCSS
T ss_pred EEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEc-------CCceEEEECCCC-------ceEEecccCCcccc
Confidence 678888887776532 332222 222222 57887753 234788999998 8777642 3333
Q ss_pred ccceeeEE-E-CC-eEEeccCCc
Q psy11470 77 RHGLGKAS-L-HI-YIQNVPEGL 96 (114)
Q Consensus 77 r~~~~~~~-~-~~-yv~GG~~~~ 96 (114)
-....++. . ++ +.+|+.++.
T Consensus 627 ~f~~~~~~~~~~G~l~~g~~~Gl 649 (781)
T 3v9f_A 627 SFISGCVTKDHNGLIYFGSINGL 649 (781)
T ss_dssp CEEEEEEEECTTSCEEEEETTEE
T ss_pred ccccCceEECCCCEEEEECCCce
Confidence 22222333 3 33 888887653
No 41
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=47.69 E-value=63 Score=21.95 Aligned_cols=52 Identities=12% Similarity=0.133 Sum_probs=31.1
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE-CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL-NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.++.+|+.+.++..+..++.+.....++.. ++.+++.++.+ ..+.+||+.+.
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-----~~i~~~d~~~g 154 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLED-----EGMDVLDINSG 154 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTS-----SSEEEEETTTC
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCC-----CeEEEEECCCC
Confidence 456777766666655444333222222222 77888877543 45889999888
No 42
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=46.48 E-value=88 Score=23.26 Aligned_cols=56 Identities=14% Similarity=0.224 Sum_probs=35.5
Q ss_pred eEEEEECCCCc--EEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEc
Q psy11470 2 SIEVFEIRANT--WTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSL 70 (114)
Q Consensus 2 ~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~ 70 (114)
.+.++|+.+.+ |+.-... +......+..++.||+ |.. ...+..||..+.+. .|+.-
T Consensus 467 ~l~A~D~~tG~~~W~~~~~~--~~~~g~~~tagglvf~-g~~-----dg~l~A~D~~tG~~-----lW~~~ 524 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKEHL--PLWAGVLATAGNLVFT-GTG-----DGYFKAFDAKSGKE-----LWKFQ 524 (582)
T ss_dssp EEEEECTTTCCEEEEEEESS--CCCSCCEEETTTEEEE-ECT-----TSEEEEEETTTCCE-----EEEEE
T ss_pred eEEEEECCCCCEEEEecCCC--CCcccceEeCCCEEEE-ECC-----CCcEEEEECCCCCE-----EEEec
Confidence 36788998876 8764332 3334344555788877 432 35789999988843 57653
No 43
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=46.17 E-value=58 Score=21.08 Aligned_cols=49 Identities=10% Similarity=0.211 Sum_probs=25.9
Q ss_pred EEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 3 IEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 3 ~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
+.+||..+........ ..........+ ++.+++.|+.+ ..+.+||..+.
T Consensus 197 i~i~d~~~~~~~~~~~--~h~~~v~~~~~s~~~~~l~s~s~D-----g~i~iwd~~~~ 247 (340)
T 4aow_A 197 VKVWNLANCKLKTNHI--GHTGYLNTVTVSPDGSLCASGGKD-----GQAMLWDLNEG 247 (340)
T ss_dssp EEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEETT-----CEEEEEETTTT
T ss_pred EEEEECCCCceeeEec--CCCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEeccC
Confidence 5667776655432211 11112222223 56777777654 46778888776
No 44
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=45.62 E-value=1e+02 Score=23.64 Aligned_cols=58 Identities=16% Similarity=0.221 Sum_probs=36.5
Q ss_pred CcEEEecCCcccccceeEEEE-CCEEEEEecCCC----CCCcCeEEEEeCCCCcCCcccceeEEcCCCCC
Q psy11470 11 NTWTEIGHLRNRRLQFGAEVL-NGKIHVVGGRDG----LKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLT 75 (114)
Q Consensus 11 ~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~----~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~ 75 (114)
.+|+.+..+|.....+.++.- ++.+|+..+-.. ......+++++-... +|+.+.+.|.
T Consensus 232 ~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~-------tW~~i~~~~~ 294 (737)
T 2cn3_A 232 VTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTG-------EWIDITPIPY 294 (737)
T ss_dssp SCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTC-------CEEECCSSCT
T ss_pred CceEECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCC-------CEEEccCCCC
Confidence 469988866653322333322 788998754211 113456888888888 9999987654
No 45
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=44.57 E-value=99 Score=23.33 Aligned_cols=63 Identities=10% Similarity=0.219 Sum_probs=37.8
Q ss_pred eEEEEECCCCc--EEEecCCcc--cccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEE
Q psy11470 2 SIEVFEIRANT--WTEIGHLRN--RRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTS 69 (114)
Q Consensus 2 ~~~~yd~~~~~--W~~~~~~~~--~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~ 69 (114)
.+.++|..+.+ |+.-..-+. .......++.++.||+..+.........+..||..+.+. .|+.
T Consensus 128 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~-----~W~~ 194 (668)
T 1kv9_A 128 RLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKL-----AWRF 194 (668)
T ss_dssp EEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE-----EEEE
T ss_pred EEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcE-----EEEe
Confidence 47889988775 876532111 112223455688888743222223456899999988844 5865
No 46
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=44.10 E-value=69 Score=21.38 Aligned_cols=50 Identities=18% Similarity=0.229 Sum_probs=28.8
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE-C-CEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL-N-GKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||+.+++-...... ......++.. + ..||+.++. .+.+.+||..+.
T Consensus 97 ~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~ 148 (391)
T 1l0q_A 97 TLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNG-----DKTVSVINTVTK 148 (391)
T ss_dssp EEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETT-----TTEEEEEETTTT
T ss_pred EEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCC-----CCEEEEEECCCC
Confidence 578889888765443221 1112222322 3 457777643 347899999888
No 47
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=42.94 E-value=1.1e+02 Score=23.21 Aligned_cols=78 Identities=10% Similarity=0.043 Sum_probs=38.8
Q ss_pred EEEEECCCCcEEEec--CCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCCCCCcccce
Q psy11470 3 IEVFEIRANTWTEIG--HLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPSMLTHRHGL 80 (114)
Q Consensus 3 ~~~yd~~~~~W~~~~--~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~~~~~r~~~ 80 (114)
+.+||+.++++.... .+|.. .-.++..-++.|++.. .+-+.+||+.+. +..... ++......
T Consensus 538 l~~~~~~~~~~~~~~~~gl~~~-~i~~i~~~~g~lWi~t-------~~Gl~~~~~~~~-------~~~~~~-~~~~~~~~ 601 (758)
T 3ott_A 538 VMRINPKDESQQSISFGSFSNN-EILSMTCVKNSIWVST-------TNGLWIIDRKTM-------DARQQN-MTNKRFTS 601 (758)
T ss_dssp EEEECC--CCCCBCCCCC---C-CEEEEEEETTEEEEEE-------SSCEEEEETTTC-------CEEEC---CCCCCSE
T ss_pred eEEEecCCCceEEecccCCCcc-ceEEEEECCCCEEEEC-------CCCeEEEcCCCc-------eeEEec-CCCCceee
Confidence 567888877765542 23321 1222333478888743 235788999988 765542 22222221
Q ss_pred eeEEE-CC-eEEeccCCc
Q psy11470 81 GKASL-HI-YIQNVPEGL 96 (114)
Q Consensus 81 ~~~~~-~~-yv~GG~~~~ 96 (114)
++... ++ +.+||.++.
T Consensus 602 ~~~~~~~G~l~fG~~~Gl 619 (758)
T 3ott_A 602 LLFDPKEDCVYLGGADGF 619 (758)
T ss_dssp EEEETTTTEEEEECBSEE
T ss_pred eEEECCCCcEEEecCCce
Confidence 22222 34 888887653
No 48
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=42.79 E-value=66 Score=20.77 Aligned_cols=62 Identities=13% Similarity=0.135 Sum_probs=30.5
Q ss_pred eEEEEECC--CCcEEEecCCcccccceeEEEE-CC-EEEEEecCCCCCCcCeEEEE--eCCCCcCCcccceeEEcCCCCC
Q psy11470 2 SIEVFEIR--ANTWTEIGHLRNRRLQFGAEVL-NG-KIHVVGGRDGLKTVNTFEYL--NTHSDMKDRIEVTWTSLPSMLT 75 (114)
Q Consensus 2 ~~~~yd~~--~~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~--d~~t~~~~~~~~~W~~~~~~~~ 75 (114)
.+.+||.. +.+...+..++.......++.. ++ .||+.+.. .+.+.+| |+.+. ++..+..++.
T Consensus 254 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~v~~~d~~~g-------~~~~~~~~~~ 321 (343)
T 1ri6_A 254 LITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQK-----SHHISVYEIVGEQG-------LLHEKGRYAV 321 (343)
T ss_dssp EEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTT-----TCEEEEEEEETTTT-------EEEEEEEEEC
T ss_pred EEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCC-----CCeEEEEEEcCCCc-------eeeEcccccc
Confidence 35667766 4455555433322222222222 34 46654422 2345555 77788 7776655443
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=42.25 E-value=66 Score=20.65 Aligned_cols=52 Identities=13% Similarity=0.169 Sum_probs=28.0
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||..+.+......+...........+ ++.+++.|+.+ ..+.+||..+.
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~ 173 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQ 173 (337)
T ss_dssp EEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTT
T ss_pred cEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCC
Confidence 467888877764443333222222223333 56666666543 35888898877
No 50
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=41.91 E-value=1.1e+02 Score=23.22 Aligned_cols=79 Identities=9% Similarity=0.146 Sum_probs=44.7
Q ss_pred EEEEECCCCcEEEecC---CcccccceeEEEE-CCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCC---CCC
Q psy11470 3 IEVFEIRANTWTEIGH---LRNRRLQFGAEVL-NGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPS---MLT 75 (114)
Q Consensus 3 ~~~yd~~~~~W~~~~~---~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~---~~~ 75 (114)
+.+||+.+.++..... +|... -.+++.- ++.|++.+ .+-+.+||+.+. ++..... ++.
T Consensus 564 l~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t-------~~Gl~~~~~~~~-------~~~~~~~~dGl~~ 628 (795)
T 4a2l_A 564 FYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLST-------NRGISCFNPETE-------KFRNFTESDGLQS 628 (795)
T ss_dssp EEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEE-------TTEEEEEETTTT-------EEEEECGGGTCSC
T ss_pred ceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEc-------CCceEEEcCCCC-------cEEEcCCcCCCcc
Confidence 5789999888877642 22211 1122222 57787754 245788999999 8876642 333
Q ss_pred cccceee-EEEC-C-eEEeccCCc
Q psy11470 76 HRHGLGK-ASLH-I-YIQNVPEGL 96 (114)
Q Consensus 76 ~r~~~~~-~~~~-~-yv~GG~~~~ 96 (114)
......+ +... + +.+|+.++.
T Consensus 629 ~~f~~~~~~~~~~G~l~~g~~~Gl 652 (795)
T 4a2l_A 629 NQFNTASYCRTSVGQMYFGGINGI 652 (795)
T ss_dssp SCEEEEEEEECTTSCEEEEETTEE
T ss_pred ccCccCceeECCCCeEEEecCCce
Confidence 3222223 3333 3 778876543
No 51
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=41.76 E-value=45 Score=18.59 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=20.8
Q ss_pred EEEECCCCcEEEecCCcccccceeEEEECCEEEE
Q psy11470 4 EVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHV 37 (114)
Q Consensus 4 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv 37 (114)
+.||+.+......+. +.+...+.+..-++.|||
T Consensus 66 ~~Fdl~~G~~~~~P~-~~~L~~~~v~~~~g~v~v 98 (106)
T 3dqy_A 66 GKFCVRTGKVKALPA-CKPIKVFPIKVEGDEVHV 98 (106)
T ss_dssp CEEETTTCCEEETTC-CSCCCEECEEEETTEEEE
T ss_pred CEEeCCCCCEeCCCC-CCCccEEEEEEECCEEEE
Confidence 568887777766543 223344556666888887
No 52
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=40.48 E-value=1.1e+02 Score=22.88 Aligned_cols=55 Identities=7% Similarity=0.160 Sum_probs=34.6
Q ss_pred eEEEEECCCCc--EEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEE
Q psy11470 2 SIEVFEIRANT--WTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTS 69 (114)
Q Consensus 2 ~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~ 69 (114)
.+.++|+.+.+ |+.-...| ......+..++.||+ |. ....+..||..+.+. .|+.
T Consensus 454 ~l~A~D~~tG~~~W~~~~~~~--~~~g~~~tagg~vf~-gt-----~dg~l~A~D~~tG~~-----lW~~ 510 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKMERFA--VWGGTMATAGDLVFY-GT-----LDGYLKARDSDTGDL-----LWKF 510 (599)
T ss_dssp EEEEECTTTCCEEEEEEESSC--CCSBCEEETTTEEEE-EC-----TTSEEEEEETTTCCE-----EEEE
T ss_pred eEEEEECCCCCEEeEecCCCC--ccCcceEecCCEEEE-EC-----CCCeEEEEECCCCCE-----EEEe
Confidence 36788988875 87643322 223334445778877 42 235789999998843 5865
No 53
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=39.55 E-value=1.1e+02 Score=22.55 Aligned_cols=64 Identities=8% Similarity=0.119 Sum_probs=36.9
Q ss_pred eEEEEECCCCc--EEEecCCccc--ccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEc
Q psy11470 2 SIEVFEIRANT--WTEIGHLRNR--RLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSL 70 (114)
Q Consensus 2 ~~~~yd~~~~~--W~~~~~~~~~--~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~ 70 (114)
.+.++|..+.+ |+.-..-+.. .....-++.++.||+.....+......+..||+.+.+. .|+.-
T Consensus 126 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~-----~W~~~ 193 (571)
T 2ad6_A 126 HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGEL-----KWRAF 193 (571)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCE-----EEEEE
T ss_pred EEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcE-----EEEEc
Confidence 47889988774 8754221111 11223345688888754321112346899999988743 68653
No 54
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=38.51 E-value=1.3e+02 Score=22.85 Aligned_cols=64 Identities=13% Similarity=0.277 Sum_probs=38.3
Q ss_pred eEEEEECCCCc--EEEecC-Ccc--cccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEc
Q psy11470 2 SIEVFEIRANT--WTEIGH-LRN--RRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSL 70 (114)
Q Consensus 2 ~~~~yd~~~~~--W~~~~~-~~~--~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~ 70 (114)
.+.++|..+.+ |+.-.. -+. .......++.++.||+-.+.........+..||..|.+. .|+.-
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~-----~W~~~ 200 (689)
T 1yiq_A 132 RLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKE-----AWRFY 200 (689)
T ss_dssp EEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE-----EEEEE
T ss_pred EEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcE-----EEEec
Confidence 47889988765 876543 111 122233455688888743322223456899999998843 58653
No 55
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=37.06 E-value=1.3e+02 Score=22.68 Aligned_cols=64 Identities=9% Similarity=0.232 Sum_probs=37.9
Q ss_pred eEEEEECCCCc--EEEecC-Ccc--cccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEc
Q psy11470 2 SIEVFEIRANT--WTEIGH-LRN--RRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSL 70 (114)
Q Consensus 2 ~~~~yd~~~~~--W~~~~~-~~~--~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~ 70 (114)
.+.++|..+.+ |+.-.. -+. .......++.++.||+..+.........+..||..+.+. .|+.-
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~-----~W~~~ 207 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGER-----KWRWF 207 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCE-----EEEEE
T ss_pred EEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcE-----EEEec
Confidence 47889987765 776432 111 112223345688888754322222457899999988843 57653
No 56
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=36.32 E-value=1.4e+02 Score=22.49 Aligned_cols=64 Identities=9% Similarity=0.208 Sum_probs=36.8
Q ss_pred eEEEEECCCCc--EEEecCCccc--ccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEc
Q psy11470 2 SIEVFEIRANT--WTEIGHLRNR--RLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSL 70 (114)
Q Consensus 2 ~~~~yd~~~~~--W~~~~~~~~~--~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~ 70 (114)
.+.++|..+.+ |+.-..-+.. .....-++.++.||+-.+..+......+..||..+.+. .|+.-
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~-----~W~~~ 199 (599)
T 1w6s_A 132 NVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQ-----VWRAY 199 (599)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCE-----EEEEE
T ss_pred EEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcE-----EEEEc
Confidence 46789987766 7754221111 11223345688887643221112356899999998844 57654
No 57
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=36.18 E-value=63 Score=18.62 Aligned_cols=35 Identities=17% Similarity=0.140 Sum_probs=23.0
Q ss_pred EEEECCCCcEEEecCCcccccceeEEEECCEEEEEe
Q psy11470 4 EVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVG 39 (114)
Q Consensus 4 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~G 39 (114)
+.||+.+..-...+.. .+...+.+.+-++.|||.-
T Consensus 77 ~~Fdl~tG~~~~~P~~-~~L~~~~v~v~~g~V~v~~ 111 (121)
T 3gce_A 77 GRFDVRTGAPTALPCV-LPVRAYDVVVDGTEILVAP 111 (121)
T ss_dssp CEEETTTCCEEETTCC-SCCCBCCEEEETTEEEECC
T ss_pred CEEcCCCccEeCCCCc-CCcceEEEEEECCEEEEEE
Confidence 5789888877665542 2334455666789998843
No 58
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=35.62 E-value=1e+02 Score=20.89 Aligned_cols=51 Identities=10% Similarity=0.184 Sum_probs=30.3
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
++.+||..+............ .....+.+ ++.++++|+.+ ..+.+||..+.
T Consensus 114 ~v~lw~~~~~~~~~~~~~~~~-~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~ 166 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETDES-TYVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQ 166 (401)
T ss_dssp EEEEEETTTCCEEEEEECCTT-CCEEEEEECTTSSEEEEEETT-----SCEEEEETTTC
T ss_pred eEEEeeCCCCcEeEeeecCCC-CCEEEEEECCCCCEEEEECCC-----CeEEEEECcCC
Confidence 477888888776655433211 12222333 56666777543 36788888777
No 59
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=35.52 E-value=90 Score=20.21 Aligned_cols=52 Identities=8% Similarity=0.036 Sum_probs=29.9
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE-CC-EEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL-NG-KIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.++|+.+.+....-..+........+.. ++ .+|+.+.. ...+.+||+.+.
T Consensus 22 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~ 75 (349)
T 1jmx_B 22 NLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTC 75 (349)
T ss_dssp EEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTT
T ss_pred eEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCC
Confidence 578999988775443222220012223332 44 57776532 357899999887
No 60
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=35.36 E-value=90 Score=20.19 Aligned_cols=50 Identities=12% Similarity=0.057 Sum_probs=29.5
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEE-ECC-EEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEV-LNG-KIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||+.+.+.......+. ....++. -++ .+|+.+.. ...+.++|+.+.
T Consensus 21 ~v~~~d~~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~-----~~~i~~~d~~~~ 72 (331)
T 3u4y_A 21 RISFFSTDTLEILNQITLGY--DFVDTAITSDCSNVVVTSDF-----CQTLVQIETQLE 72 (331)
T ss_dssp EEEEEETTTCCEEEEEECCC--CEEEEEECSSSCEEEEEEST-----TCEEEEEECSSS
T ss_pred eEEEEeCcccceeeeEEccC--CcceEEEcCCCCEEEEEeCC-----CCeEEEEECCCC
Confidence 57889998888755433322 1222222 244 57776542 237888888877
No 61
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=35.05 E-value=1.4e+02 Score=22.21 Aligned_cols=58 Identities=16% Similarity=0.267 Sum_probs=36.6
Q ss_pred eEEEEECCCCc--EEEecCCcccc------cceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEc
Q psy11470 2 SIEVFEIRANT--WTEIGHLRNRR------LQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSL 70 (114)
Q Consensus 2 ~~~~yd~~~~~--W~~~~~~~~~~------~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~ 70 (114)
.+.++|..+.+ |+.-...+... ...+.++.+++||+.. ....+..+|..|.+. .|+.-
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t------~dg~l~AlD~~TG~~-----~W~~~ 144 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGT------LDASVVALNKNTGKV-----VWKKK 144 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEE------TTTEEEEEESSSCCE-----EEEEE
T ss_pred CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEe------CCCEEEEEECCCCCE-----Eeeec
Confidence 37889987765 87754433210 1233456789998842 235789999988844 68753
No 62
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=34.68 E-value=93 Score=20.13 Aligned_cols=21 Identities=14% Similarity=0.137 Sum_probs=14.5
Q ss_pred CEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 33 GKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 33 ~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
+.+++.|+.+ ..+.++|..+.
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~ 87 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENG 87 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSS
T ss_pred CCEEEEEcCC-----CEEEEEEcCCC
Confidence 5666777653 46778888777
No 63
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=34.46 E-value=95 Score=20.16 Aligned_cols=50 Identities=16% Similarity=0.298 Sum_probs=25.5
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||..+..-.. .+.........+.+ ++.+++.|+.+ ..+..||..+.
T Consensus 209 ~i~iWd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~l~s~s~D-----g~i~iWd~~~~ 260 (304)
T 2ynn_A 209 TIKIWDYQTKSCVA--TLEGHMSNVSFAVFHPTLPIIISGSED-----GTLKIWNSSTY 260 (304)
T ss_dssp EEEEEETTTTEEEE--EEECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTC
T ss_pred eEEEEeCCCCccce--eeCCCCCCEEEEEECCCCCEEEEEcCC-----CeEEEEECCCC
Confidence 35667776654322 12211222222333 45666666653 46778888777
No 64
>3syx_A Sprouty-related, EVH1 domain-containing protein 1; WH1 domain, human sprouty-related, EVH1 domain-containing PR Q7Z699; 2.45A {Homo sapiens}
Probab=34.29 E-value=72 Score=19.23 Aligned_cols=17 Identities=12% Similarity=0.323 Sum_probs=14.0
Q ss_pred eEEEEECCCCcEEEecC
Q psy11470 2 SIEVFEIRANTWTEIGH 18 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~ 18 (114)
.|..||+.+++|.....
T Consensus 19 ~Vm~~Dd~tk~WlP~gg 35 (130)
T 3syx_A 19 VVMTRDDSSGGWLPLGG 35 (130)
T ss_dssp EEEEECSSSSCEEESSS
T ss_pred EeeeEcCCCCceEeCCC
Confidence 36889999999988754
No 65
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=32.60 E-value=96 Score=19.64 Aligned_cols=49 Identities=14% Similarity=0.128 Sum_probs=24.7
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||..+.+-... +...........+ ++. ++.|+. ...+.+||..+.
T Consensus 206 ~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~-l~~~~~-----dg~v~iwd~~~~ 256 (313)
T 3odt_A 206 LIKLVDMHTGDVLRT--YEGHESFVYCIKLLPNGD-IVSCGE-----DRTVRIWSKENG 256 (313)
T ss_dssp EEEEEETTTCCEEEE--EECCSSCEEEEEECTTSC-EEEEET-----TSEEEEECTTTC
T ss_pred eEEEEECCchhhhhh--hhcCCceEEEEEEecCCC-EEEEec-----CCEEEEEECCCC
Confidence 467788776543221 1111122222223 444 455544 346888888877
No 66
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=31.58 E-value=68 Score=17.66 Aligned_cols=34 Identities=6% Similarity=0.012 Sum_probs=19.8
Q ss_pred EEEECCCCcEEEecCCcccccceeEEEECCEEEEE
Q psy11470 4 EVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVV 38 (114)
Q Consensus 4 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~ 38 (114)
+.||+++......+.. .+...+.+..-++.|||.
T Consensus 68 ~~Fd~~~G~~~~~P~~-~~L~~~~v~~~~g~v~v~ 101 (103)
T 2qpz_A 68 GRFDVCTGKALCAPVT-QNIKTYPVKIENLRVMID 101 (103)
T ss_dssp CEEETTTCCEEETTCC-SCCCEECEEEETTEEEEE
T ss_pred CEEeCCCCCEeCCCCC-CCCCEEeEEEECCEEEEE
Confidence 4688877776655432 222334455567788763
No 67
>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D*
Probab=31.07 E-value=74 Score=18.08 Aligned_cols=36 Identities=19% Similarity=0.161 Sum_probs=21.3
Q ss_pred EEEECCCCcEEEecCCcccccceeEEEECCEEEEEec
Q psy11470 4 EVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGG 40 (114)
Q Consensus 4 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG 40 (114)
+.||+.+..-...|.. .+...+.+...++.|||.-+
T Consensus 70 ~~Fdl~tG~~~~~P~~-~~L~~~~v~~~~g~V~v~~~ 105 (115)
T 2de6_D 70 GAFNVCTGMPASSPCT-VPLGVFEVEVKEGEVYVAGE 105 (115)
T ss_dssp CEEETTTCCEEETTCC-SCCCEEEEEESSSEEEEEEE
T ss_pred CEEcCCCcCEeCCCCc-CCCCEEEEEEECCEEEEecC
Confidence 5688877776655431 22333445556788887543
No 68
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=30.56 E-value=1.3e+02 Score=20.44 Aligned_cols=47 Identities=6% Similarity=0.177 Sum_probs=29.3
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
+++++|..+.+ .+..++... ..+++.- +..||+.+ . +++.+||..+.
T Consensus 287 ~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n------~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 287 EIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLD------G-GNVNVYDISQP 335 (361)
T ss_dssp EEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEEC------S-SCEEEEECSSS
T ss_pred eEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeC------C-CeEEEEECCCC
Confidence 47888887765 344444444 4444443 35666643 1 78999998877
No 69
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=29.42 E-value=1.4e+02 Score=20.54 Aligned_cols=22 Identities=9% Similarity=0.078 Sum_probs=14.8
Q ss_pred CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 32 NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 32 ~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
++.+++.|+.+ ..+.++|..++
T Consensus 176 ~~~~l~s~s~D-----~~v~iwd~~~~ 197 (435)
T 4e54_B 176 NTNQFYASSME-----GTTRLQDFKGN 197 (435)
T ss_dssp CTTEEEEECSS-----SCEEEEETTSC
T ss_pred CCCEEEEEeCC-----CEEEEeeccCC
Confidence 45666767654 35778888777
No 70
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=29.19 E-value=1.9e+02 Score=21.94 Aligned_cols=54 Identities=7% Similarity=0.020 Sum_probs=32.3
Q ss_pred EEEEECCCCc--EEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEE
Q psy11470 3 IEVFEIRANT--WTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTS 69 (114)
Q Consensus 3 ~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~ 69 (114)
+.++|+.+.+ |+.-...+ ......+.-++.||+ |. ....+..||..|.+. .|+.
T Consensus 457 l~A~D~~tG~~~W~~~~~~~--~~~g~~~tagglvf~-gt-----~dg~l~a~D~~tG~~-----lw~~ 512 (689)
T 1yiq_A 457 LIAWDPVKQQAAWEVPYVTI--FNGGTLSTAGNLVFE-GS-----ADGRVIAYAADTGEK-----LWEQ 512 (689)
T ss_dssp EEEEETTTTEEEEEEEESSS--CCCCEEEETTTEEEE-EC-----TTSEEEEEETTTCCE-----EEEE
T ss_pred EEEEECCCCCeEeEccCCCC--ccCccceECCCEEEE-EC-----CCCcEEEEECCCCcc-----ceee
Confidence 6789998876 76543322 222233334566655 42 245789999998843 4765
No 71
>2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3
Probab=29.15 E-value=60 Score=18.30 Aligned_cols=33 Identities=15% Similarity=0.209 Sum_probs=17.5
Q ss_pred EEEECCCCcEEEecCCcccccceeEEEECCEEEEE
Q psy11470 4 EVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVV 38 (114)
Q Consensus 4 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~ 38 (114)
|.||..+..-...+. .+...+.+..-++.|||.
T Consensus 78 ~~Fd~~tG~~~~~P~--~~l~~~~v~v~~g~V~v~ 110 (113)
T 2jo6_A 78 QRFRLSDGLCMEDEQ--FSVKHYEARVKDGVVQLR 110 (113)
T ss_dssp EEEETTTTEETTTTT--TCCCEEEEEEETTEEEEE
T ss_pred CEEeCCCccCCCCCc--ccccEEeEEEECCEEEEE
Confidence 457776665433332 223334455557777763
No 72
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=27.86 E-value=1.3e+02 Score=19.66 Aligned_cols=52 Identities=17% Similarity=0.196 Sum_probs=26.4
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE----CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL----NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
++.+||..+.....+..+.........+.+ ++.+++.|+.+ ..+.+||..+.
T Consensus 36 ~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-----~~v~iWd~~~~ 91 (316)
T 3bg1_A 36 SVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-----RKVIIWREENG 91 (316)
T ss_dssp EEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-----SCEEEECCSSS
T ss_pred eEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-----CEEEEEECCCC
Confidence 456677666543333222222222222333 25666666653 45777888776
No 73
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=27.21 E-value=1.4e+02 Score=19.80 Aligned_cols=51 Identities=8% Similarity=0.175 Sum_probs=25.7
Q ss_pred EEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 3 IEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 3 ~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
+.+||..+..+..+..+.........+.+ ++.+++.|+.+ ..+.+||..+.
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~ 137 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEE 137 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTT
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCC
Confidence 45666665555444333322222223333 56677777654 35677776554
No 74
>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B*
Probab=26.59 E-value=91 Score=17.49 Aligned_cols=33 Identities=12% Similarity=0.087 Sum_probs=20.0
Q ss_pred EEEECCCCcEEEecCCcccccceeEEEECCEEEE
Q psy11470 4 EVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHV 37 (114)
Q Consensus 4 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv 37 (114)
+.||+.+..-...+.. .+...+.+...++.|||
T Consensus 71 ~~Fd~~tG~~~~~P~~-~~L~~~~v~~~~g~v~v 103 (112)
T 1fqt_A 71 GKFCVRTGKVKSPPPC-EALKIFPIRIEDNDVLV 103 (112)
T ss_dssp CEEETTTCCEEESSCC-SCCCBCCEEEETTEEEE
T ss_pred CEEeCCCCcEeCCCCC-CCccEEEEEEECCEEEE
Confidence 5688877776665431 22233445556888887
No 75
>4aay_B AROB; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species}
Probab=26.08 E-value=99 Score=19.35 Aligned_cols=35 Identities=23% Similarity=0.171 Sum_probs=21.7
Q ss_pred EEEECC-CCcEEEecCCcccccceeEEE-ECCEEEEEe
Q psy11470 4 EVFEIR-ANTWTEIGHLRNRRLQFGAEV-LNGKIHVVG 39 (114)
Q Consensus 4 ~~yd~~-~~~W~~~~~~~~~~~~~~~~~-~~~~iyv~G 39 (114)
+.||+. +..-...+. +.+...+.+.+ -++.||++|
T Consensus 126 ~~Fd~~~tG~~~~gPa-~~~L~~y~v~vd~dG~V~avg 162 (175)
T 4aay_B 126 SVFDPEKGGQQVWGQA-TQNLPQYVLRVADNGDIFAEG 162 (175)
T ss_dssp CEEEGGGTTEEEECSC-SSCCCBEEEEECTTSEEEEEE
T ss_pred CEECCCCCceEecCCC-CCCcCEEEEEEEcCCEEEEEE
Confidence 578887 777665543 23333444544 378899887
No 76
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=26.06 E-value=62 Score=18.18 Aligned_cols=32 Identities=16% Similarity=0.029 Sum_probs=14.7
Q ss_pred EEEECCCCcEEEecCCcccccceeEEEECCEEEE
Q psy11470 4 EVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHV 37 (114)
Q Consensus 4 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv 37 (114)
+.||+.|..-.. +...+...+.+...++.|||
T Consensus 68 ~~Fd~~tG~~~~--p~~~~L~~~~v~~~~g~v~v 99 (111)
T 1vm9_A 68 WTFNDGTGHGIN--PDDAALAEYPVEVKGDDIYV 99 (111)
T ss_dssp CEEETTTCBBSS--SSSCBCCEECEEEETTEEEE
T ss_pred CEEeCCCccCCC--CCcCCcCEEEEEEECCEEEE
Confidence 456666554332 11122223344445666666
No 77
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=25.93 E-value=1.4e+02 Score=19.39 Aligned_cols=55 Identities=11% Similarity=0.037 Sum_probs=30.7
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE-CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL-NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+++||+.+.+...+...+ ...-..++.- ++++|+..... ......+.+||+.+.
T Consensus 67 ~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~-~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 67 NIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGD-FKSTGGIFAATENGD 122 (333)
T ss_dssp EEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTT-SSSCCEEEEECTTSC
T ss_pred EEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCC-CCCCceEEEEeCCCC
Confidence 4778888887776553211 1112222222 67888765322 112357889998887
No 78
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=25.57 E-value=95 Score=20.24 Aligned_cols=53 Identities=4% Similarity=-0.067 Sum_probs=27.5
Q ss_pred EEEEECCCCcEEEecCCcccccceeEEEE-CC-EEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 3 IEVFEIRANTWTEIGHLRNRRLQFGAEVL-NG-KIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 3 ~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
+++||+.+.+...+. ... ...+.+.. ++ .||+..........+.+.+||...+
T Consensus 171 v~~~d~~~g~~~~~~--~~~-~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 171 VYRLPPDGSPLQRMA--DLD-HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp EEEECSSSCCCEEEE--EES-SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred EEEEcCCCCcEEEEe--cCC-CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 678888777776654 111 11223332 44 5777643211112357888887655
No 79
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=25.41 E-value=2.1e+02 Score=21.20 Aligned_cols=50 Identities=12% Similarity=0.266 Sum_probs=26.2
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
+|.+||..+.+-... +.........+.+ ++.+++.|+.+ ..+.+||..+.
T Consensus 542 ~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~D-----g~i~iwd~~~~ 593 (694)
T 3dm0_A 542 TVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKD-----GVVLLWDLAEG 593 (694)
T ss_dssp CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SBCEEEETTTT
T ss_pred eEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCC
Confidence 356677666543322 1111112222233 66777777654 35777888777
No 80
>3c0d_A Putative nitrite reductase NADPH (small subunit) oxidoreductase protein; NESG, VPR162, Q87HB1, XRAY, structure; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: b.33.1.3
Probab=25.30 E-value=43 Score=19.25 Aligned_cols=35 Identities=9% Similarity=0.121 Sum_probs=20.0
Q ss_pred EEEECCCCcEEEecCCcccccceeEEEECCEEEEEec
Q psy11470 4 EVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGG 40 (114)
Q Consensus 4 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG 40 (114)
|.||+++..-...+. .+...+.+.+-++.|||.-+
T Consensus 76 ~~Fdl~tG~~~~~P~--~~l~~~~v~v~~g~V~v~~~ 110 (119)
T 3c0d_A 76 QHFSLKSGQCLEDEA--HCLKTWRVTVDDNQVCYLAK 110 (119)
T ss_dssp CEEETTTCBBSSCTT--CBCCEECEEESSSEEEEECC
T ss_pred CEEECCCCcCCCCCC--ceeeEEEEEEECCEEEEEeC
Confidence 467777766544333 22334445556888888644
No 81
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=24.70 E-value=1.5e+02 Score=19.30 Aligned_cols=52 Identities=6% Similarity=0.059 Sum_probs=26.9
Q ss_pred eEEEEECCCCc--EEEecCCcccccceeEEEE--C---CEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANT--WTEIGHLRNRRLQFGAEVL--N---GKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~--W~~~~~~~~~~~~~~~~~~--~---~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||..+.. +..+..+...........+ + +.+++.|+.+ ..+.+||..+.
T Consensus 183 ~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----g~i~iwd~~~~ 241 (379)
T 3jrp_A 183 LVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQD-----RTCIIWTQDNE 241 (379)
T ss_dssp CEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETT-----SCEEEEEESST
T ss_pred eEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCC-----CEEEEEeCCCC
Confidence 35667665433 4333333222222223333 4 6788887754 35777777665
No 82
>1g8k_B Arsenite oxidase; molybdopterin, [3Fe-4S] cluster, [2Fe-2S] rieske, oxidoreductase; HET: MGD; 1.64A {Alcaligenes faecalis} SCOP: b.33.1.1 PDB: 1g8j_B*
Probab=24.60 E-value=1.1e+02 Score=17.91 Aligned_cols=35 Identities=11% Similarity=-0.011 Sum_probs=20.3
Q ss_pred EEEECC-CCcEEEecCCcccccceeEEEE--CCEEEEEe
Q psy11470 4 EVFEIR-ANTWTEIGHLRNRRLQFGAEVL--NGKIHVVG 39 (114)
Q Consensus 4 ~~yd~~-~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~G 39 (114)
+.||+. +..-...+. +.+...+.+.+- ++.||+.|
T Consensus 83 ~~Fd~~~~G~~~~gP~-~~~L~~~~v~v~~~g~~V~v~g 120 (133)
T 1g8k_B 83 TEFDAEKAGQMICGEA-TADLPRVLLRYDAASDALTAVG 120 (133)
T ss_dssp CEEEGGGTTEEEESSC-SSCCCEEEEEEETTTTEEEEEE
T ss_pred CEECCCCCCCEEcCCC-CCCCCEEEEEEECCCCEEEEEe
Confidence 568887 676655432 223333445555 56799887
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=24.23 E-value=1.7e+02 Score=19.76 Aligned_cols=50 Identities=12% Similarity=0.088 Sum_probs=25.0
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CC-EEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NG-KIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||..+..-...-... .......+ ++ .|++.+|.. ...+.+||..+.
T Consensus 285 ~i~i~d~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~~g~~----dg~i~v~~~~~~ 337 (401)
T 4aez_A 285 QIHFWNAATGARVNTVDAG---SQVTSLIWSPHSKEIMSTHGFP----DNNLSIWSYSSS 337 (401)
T ss_dssp EEEEEETTTCCEEEEEECS---SCEEEEEECSSSSEEEEEECTT----TCEEEEEEEETT
T ss_pred EEEEEECCCCCEEEEEeCC---CcEEEEEECCCCCeEEEEeecC----CCcEEEEecCCc
Confidence 4677887766543322111 11222222 34 444443432 347888888776
No 84
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=23.91 E-value=1.6e+02 Score=19.40 Aligned_cols=60 Identities=10% Similarity=-0.034 Sum_probs=29.4
Q ss_pred EEEEECCCCcEEEecCCcccccceeEEE-ECC-EEEEEecCCCCCCcCeEEEE--eCCCCcCCcccceeEEcCC
Q psy11470 3 IEVFEIRANTWTEIGHLRNRRLQFGAEV-LNG-KIHVVGGRDGLKTVNTFEYL--NTHSDMKDRIEVTWTSLPS 72 (114)
Q Consensus 3 ~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~--d~~t~~~~~~~~~W~~~~~ 72 (114)
++.+|+.+.+.+.+... .......++. -++ .||+..... .....+.+| +..+. +...+..
T Consensus 31 ~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~--~~~~~v~~~~~~~~~g-------~~~~~~~ 94 (361)
T 3scy_A 31 TFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFS--KDQAAVSAFAFDKEKG-------TLHLLNT 94 (361)
T ss_dssp EEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCS--STTCEEEEEEEETTTT-------EEEEEEE
T ss_pred EEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccC--CCCCcEEEEEEeCCCC-------cEEEeeE
Confidence 45667788887766543 2111112222 244 576655321 123455444 55556 6655543
No 85
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=23.91 E-value=2.2e+02 Score=20.99 Aligned_cols=58 Identities=10% Similarity=0.160 Sum_probs=36.4
Q ss_pred eEEEEEC-CCCc--EEEecCCccc--------ccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEc
Q psy11470 2 SIEVFEI-RANT--WTEIGHLRNR--------RLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSL 70 (114)
Q Consensus 2 ~~~~yd~-~~~~--W~~~~~~~~~--------~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~ 70 (114)
.++++|. .+.+ |+.-...+.. ....+.++.+++||+... ...+..+|..+.+. .|+.-
T Consensus 74 ~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l~alD~~tG~~-----~W~~~ 142 (571)
T 2ad6_A 74 NTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGHLLALDAKTGKI-----NWEVE 142 (571)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEEEEEETTTCCE-----EEEEE
T ss_pred EEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCEEEEEECCCCCE-----EEEec
Confidence 4789998 6655 8765433211 112335567899988532 35789999988844 68753
No 86
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=23.55 E-value=1.6e+02 Score=19.10 Aligned_cols=50 Identities=10% Similarity=0.043 Sum_probs=28.4
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE-C-CEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL-N-GKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.++++|+.+.+-...-.. .......+.. + +.+|+.... .+.+.++|+.+.
T Consensus 70 ~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~ 121 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTV-----NSAVTAIDAKTG 121 (353)
T ss_dssp EEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETT-----TTEEEEEETTTC
T ss_pred cEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecC-----CCEEEEEeCCCC
Confidence 477888877664332211 1112233333 4 458776543 247899999887
No 87
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=23.40 E-value=2.4e+02 Score=21.30 Aligned_cols=52 Identities=10% Similarity=0.258 Sum_probs=31.0
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--C--CEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--N--GKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~--~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||..+..+..+..+.........+.+ + +.+++.|+.+ ..+.+||..+.
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~ 133 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKEN 133 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSS
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecC
Confidence 467888888877666544433333333444 3 6677777653 36777776655
No 88
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=22.94 E-value=1.6e+02 Score=19.01 Aligned_cols=52 Identities=12% Similarity=0.059 Sum_probs=26.4
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||..+........+.........+.+ ++.+++.|+.+ ..+.+||..+.
T Consensus 65 ~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~ 118 (368)
T 3mmy_A 65 DVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSN 118 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTT
T ss_pred cEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCC
Confidence 356677665332221112212222223333 56666666543 47888998888
No 89
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=22.54 E-value=74 Score=17.73 Aligned_cols=34 Identities=9% Similarity=0.119 Sum_probs=16.6
Q ss_pred EEEECCCCcEEEecCCcccccceeEEEECCEEEEE
Q psy11470 4 EVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVV 38 (114)
Q Consensus 4 ~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~ 38 (114)
+.||+.+..-...+. +.+...+.+...++.|||.
T Consensus 69 ~~Fdl~tG~~~~~P~-~~~L~~~~v~~~~g~v~v~ 102 (108)
T 2i7f_A 69 GSFDIATGAAKAFPC-QIPIKTYPVTIEDGWVCID 102 (108)
T ss_dssp CEEETTTCCBCSTTC-CSCCCEECEEEETTEEEEE
T ss_pred CEEeCCCcCEeCCCC-CCCccEEeEEEECCEEEEe
Confidence 456766655433322 1222334445557777764
No 90
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=21.60 E-value=2.2e+02 Score=20.14 Aligned_cols=50 Identities=8% Similarity=0.019 Sum_probs=30.5
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEE-ECC--EEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEV-LNG--KIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~--~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
+|+++|.++.+-.. .++......+++. -++ .+|+.-+ ..+++.++|..+.
T Consensus 312 ~V~viD~~t~kv~~--~i~vg~~~~~lavs~D~~~~ly~tn~-----~~~~VsViD~~t~ 364 (386)
T 3sjl_D 312 FVVVLDAKTGERLA--KFEMGHEIDSINVSQDEKPLLYALST-----GDKTLYIHDAESG 364 (386)
T ss_dssp EEEEEETTTCCEEE--EEEEEEEECEEEECSSSSCEEEEEET-----TTTEEEEEETTTC
T ss_pred EEEEEECCCCeEEE--EEECCCCcceEEECCCCCeEEEEEcC-----CCCeEEEEECCCC
Confidence 58899988877543 2333322223333 354 4676432 3578999999998
No 91
>4fmw_A RNA (guanine-9-)-methyltransferase domain-contain protein 2; structural genomics, structural genomics consortium, SGC, RN modification; HET: SAH; 2.00A {Homo sapiens}
Probab=21.44 E-value=48 Score=21.31 Aligned_cols=12 Identities=33% Similarity=0.451 Sum_probs=9.7
Q ss_pred CCEEEEEecCCC
Q psy11470 32 NGKIHVVGGRDG 43 (114)
Q Consensus 32 ~~~iyv~GG~~~ 43 (114)
.+++||+||.-+
T Consensus 119 ~~~vYIIGGiVD 130 (197)
T 4fmw_A 119 ESKAYVIGGLVD 130 (197)
T ss_dssp TTSEEEEECCCC
T ss_pred CCCEEEEEEEEe
Confidence 578999999853
No 92
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=21.40 E-value=2.1e+02 Score=20.84 Aligned_cols=61 Identities=11% Similarity=0.171 Sum_probs=33.2
Q ss_pred eEEEEECC-CCcEEEecCCccc-ccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCCcCCcccceeEEcCC
Q psy11470 2 SIEVFEIR-ANTWTEIGHLRNR-RLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSDMKDRIEVTWTSLPS 72 (114)
Q Consensus 2 ~~~~yd~~-~~~W~~~~~~~~~-~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~~~~~~~~~W~~~~~ 72 (114)
+++++|.. +..+.....+... ........+ |++||+.+..++ ...++.+|+.+. ++..+.+
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~-------~~~~l~~ 282 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATG-------AATQLCR 282 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTC-------CEEESSC
T ss_pred EEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCC---CeEEEEEECCCC-------ceeeccc
Confidence 47788877 4533222222111 112122222 677877765432 347888998888 7777754
No 93
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=20.84 E-value=1.7e+02 Score=18.68 Aligned_cols=50 Identities=16% Similarity=0.264 Sum_probs=27.1
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEE--CCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVL--NGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||..+.+-... ++..........+ ++.+++.|+.+ ..+.+||..+.
T Consensus 130 ~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~ 181 (312)
T 4ery_A 130 SVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYD-----GLCRIWDTASG 181 (312)
T ss_dssp CEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTC
T ss_pred cEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCC
Confidence 466788776553322 1111122222333 56677777653 36788898777
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=20.58 E-value=2.1e+02 Score=19.53 Aligned_cols=50 Identities=20% Similarity=0.304 Sum_probs=25.5
Q ss_pred eEEEEECCCCcEEEecCCcccccceeEEEECCEEEEEecCCCCCCcCeEEEEeCCCC
Q psy11470 2 SIEVFEIRANTWTEIGHLRNRRLQFGAEVLNGKIHVVGGRDGLKTVNTFEYLNTHSD 58 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~t~ 58 (114)
.+.+||..+.+-... +............++.+++.|+.+ ..+.+||..+.
T Consensus 300 ~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~ 349 (445)
T 2ovr_B 300 SIRVWDVETGNCIHT--LTGHQSLTSGMELKDNILVSGNAD-----STVKIWDIKTG 349 (445)
T ss_dssp CEEEEETTTCCEEEE--ECCCCSCEEEEEEETTEEEEEETT-----SCEEEEETTTC
T ss_pred eEEEEECCCCCEEEE--EcCCcccEEEEEEeCCEEEEEeCC-----CeEEEEECCCC
Confidence 356777766553221 111112222333445555666543 46788888766
No 95
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=20.37 E-value=83 Score=18.93 Aligned_cols=15 Identities=20% Similarity=0.523 Sum_probs=12.5
Q ss_pred eEEEEECCCCcEEEe
Q psy11470 2 SIEVFEIRANTWTEI 16 (114)
Q Consensus 2 ~~~~yd~~~~~W~~~ 16 (114)
.++.||..++.|.+.
T Consensus 39 ~vY~f~~~~~~W~K~ 53 (134)
T 2lyd_A 39 AFYTFNSSQNEWEKT 53 (134)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEecCCcCceeEc
Confidence 367899999999876
Done!