Query psy11482
Match_columns 172
No_of_seqs 79 out of 81
Neff 3.5
Searched_HMMs 13730
Date Fri Aug 16 19:34:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11482.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11482hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1olma1 a.5.3.1 (A:1-75) Super 51.6 11 0.00083 23.6 4.6 40 94-140 5-44 (75)
2 d1wr6a1 a.7.8.1 (A:211-300) AD 48.4 14 0.001 24.4 4.8 56 95-152 28-83 (90)
3 d2z3ba1 d.153.1.4 (A:1-180) Hs 45.4 4.1 0.0003 28.5 1.7 42 42-100 136-177 (180)
4 d1wrda1 a.7.8.1 (A:215-307) Ta 38.4 47 0.0035 21.6 9.1 57 93-152 28-84 (93)
5 d1h3la_ a.177.1.1 (A:) Sigma f 34.2 27 0.002 21.0 4.2 35 43-89 15-50 (75)
6 d256ba_ a.24.3.1 (A:) Cytochro 33.2 53 0.0039 22.0 6.0 75 39-113 24-102 (106)
7 d1kf6a1 a.7.3.1 (A:443-576) Fu 32.0 72 0.0052 21.8 6.7 91 40-163 5-95 (134)
8 d1o3xa_ a.7.8.1 (A:) ADP-ribos 30.8 73 0.0053 21.5 11.1 75 76-152 22-103 (112)
9 d1j2pa_ d.153.1.4 (A:) Proteas 30.5 38 0.0028 24.9 5.2 48 68-115 179-240 (243)
10 d2au5a1 a.244.1.1 (A:1-132) Hy 29.9 64 0.0047 23.1 6.1 52 33-118 67-122 (132)
11 d2hqsc1 d.79.7.1 (C:68-173) Pe 28.1 27 0.0019 22.5 3.5 54 37-90 13-71 (106)
12 d1np7a2 c.28.1.1 (A:1-204) Cry 25.1 24 0.0018 25.0 3.0 74 44-123 63-136 (204)
13 d1l5ja1 a.118.15.1 (A:1-160) A 22.7 35 0.0026 25.4 3.6 47 22-80 88-149 (160)
14 d1j2jb_ a.7.8.1 (B:) ADP-ribos 22.5 12 0.00088 22.5 0.7 13 71-83 23-35 (41)
15 d1swya_ d.2.1.3 (A:) Phage T4 21.6 37 0.0027 23.5 3.4 42 66-107 55-101 (164)
16 d2bw3a1 a.270.1.1 (A:79-162) T 20.5 38 0.0028 23.0 3.1 24 78-102 39-62 (84)
17 d1auaa1 a.5.3.1 (A:4-96) N-ter 20.1 91 0.0066 20.2 5.1 38 95-140 24-61 (93)
No 1
>d1olma1 a.5.3.1 (A:1-75) Supernatant protein factor (SPF), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.61 E-value=11 Score=23.55 Aligned_cols=40 Identities=15% Similarity=0.187 Sum_probs=28.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhhHHHhhhccccccccHHHHHHHHHH
Q psy11482 94 NHQFSSTELTTCETLKAKFHTLLMSLISFYEVDFSYDAAYLIRQLTT 140 (172)
Q Consensus 94 n~qf~~eEl~~~~~fr~K~~~~amT~iSF~eVdfTfD~~~L~~~L~e 140 (172)
=+++|++|.+.+++||+.+...... ...+|..+|.+-|.-
T Consensus 5 ~gelt~~q~~~l~elr~~l~~~~~~-------~~~~dd~~LlRFLrA 44 (75)
T d1olma1 5 VGDLSPRQKEALAKFRENVQDVLPA-------LPNPDDYFLLRWLRA 44 (75)
T ss_dssp TTBCCHHHHHHHHHHHHHHGGGGGG-------SSCCCHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHhhccc-------CCCCCHHHHHHHHHH
Confidence 3679999999999999998764322 223567777777653
No 2
>d1wr6a1 a.7.8.1 (A:211-300) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.42 E-value=14 Score=24.37 Aligned_cols=56 Identities=11% Similarity=0.048 Sum_probs=43.0
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhHHHhhhccccccccHHHHHHHHHHHHHHHHHHHhhc
Q psy11482 95 HQFSSTELTTCETLKAKFHTLLMSLISFYEVDFSYDAAYLIRQLTTLRSQLAGLLQRH 152 (172)
Q Consensus 95 ~qf~~eEl~~~~~fr~K~~~~amT~iSF~eVdfTfD~~~L~~~L~ecr~lL~~lv~~H 152 (172)
+.-++.+.+++.+|-..|+..--++..+-+ +.+=|-..|..+|. +.|.|.+++.+|
T Consensus 28 ~~~~~~~~eli~eL~~~C~~~qp~i~~li~-~~~~dee~l~elL~-~ND~L~~vl~~y 83 (90)
T d1wr6a1 28 EDSSDGDRELMKELFDQCENKRRTLFKLAS-ETEDNDNSLGDILQ-ASDNLSRVINSY 83 (90)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHHHHHHH-TCCTTCSSHHHHHH-HHHHHHHHHTHH
T ss_pred CCCccchhHHHHHHHHHHHHHHHHHHHHHh-hcCCCHHHHHHHHH-HhHHHHHHHHHH
Confidence 345677889999999999999999988864 23335556766654 899999999887
No 3
>d2z3ba1 d.153.1.4 (A:1-180) HslV (ClpQ) protease {Bacillus subtilis [TaxId: 1423]}
Probab=45.42 E-value=4.1 Score=28.55 Aligned_cols=42 Identities=10% Similarity=0.022 Sum_probs=30.2
Q ss_pred HHhHHHHHHHHHHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHhhhcCCCCCHH
Q psy11482 42 GRLLDNLYRVIKTYVSFRHQSGNGKDTNNKKQSEKIIKTLIKIIIKTTLLVKNHQFSST 100 (172)
Q Consensus 42 s~lLD~LYrl~K~yt~~~~~~~~~~~~~nkkeAeKviK~lIKi~vKigvL~rn~qf~~e 100 (172)
.-+||+.||- . +++.||++|++..|+.+..+-| |.++|..-|
T Consensus 136 ~g~l~~~~~~----~------------~s~~eA~~l~~~Al~~A~e~dv-yT~~~~~~~ 177 (180)
T d2z3ba1 136 LAAGRALKKH----A------------GESMSASEIARAALETAGEICV-YTNDQIILE 177 (180)
T ss_dssp HHHHHHHHHH----H------------GGGCCHHHHHHHHHHHHHHHCT-TCCSCCEEE
T ss_pred HHHHHHHhhc----C------------CCccCHHHHHHHHHHHHHhhcE-EcCCcEEEE
Confidence 4578888851 1 2788999999999999998755 455555433
No 4
>d1wrda1 a.7.8.1 (A:215-307) Target of Myb protein 1, TOM1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.39 E-value=47 Score=21.63 Aligned_cols=57 Identities=12% Similarity=0.174 Sum_probs=43.8
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHhhHHHhhhccccccccHHHHHHHHHHHHHHHHHHHhhc
Q psy11482 93 KNHQFSSTELTTCETLKAKFHTLLMSLISFYEVDFSYDAAYLIRQLTTLRSQLAGLLQRH 152 (172)
Q Consensus 93 rn~qf~~eEl~~~~~fr~K~~~~amT~iSF~eVdfTfD~~~L~~~L~ecr~lL~~lv~~H 152 (172)
..++-++.+.+.+.++-..|+..--.+..+-+- +=|-.+|..+|. +.|-|.+++.+|
T Consensus 28 ~p~~~~~~d~eli~eL~~~C~~~q~~i~~li~~--~~dee~l~~lL~-~ND~L~~vl~ry 84 (93)
T d1wrda1 28 VPTQAEPADLELLQELNRTCRAMQQRVLELIPQ--IANEQLTEELLI-VNDNLNNVFLRH 84 (93)
T ss_dssp CTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCHHHHHHHHH-HHHHHHHHHHHH
T ss_pred CCCCCCcchHHHHHHHHHHHHHHHHHHHHHHhh--cCCHHHHHHHHH-HHHHHHHHHHHH
Confidence 456777888899999999888888888777643 236676666665 899999999887
No 5
>d1h3la_ a.177.1.1 (A:) Sigma factor SigR {Streptomyces coelicolor a3(2) [TaxId: 100226]}
Probab=34.22 E-value=27 Score=21.00 Aligned_cols=35 Identities=17% Similarity=0.301 Sum_probs=27.2
Q ss_pred HhHHHHHHHHHHHhccccCCCCCCCCCChHHHHHHHHHHH-HHHHHHH
Q psy11482 43 RLLDNLYRVIKTYVSFRHQSGNGKDTNNKKQSEKIIKTLI-KIIIKTT 89 (172)
Q Consensus 43 ~lLD~LYrl~K~yt~~~~~~~~~~~~~nkkeAeKviK~lI-Ki~vKig 89 (172)
+-.+.||+++..+++ |..+||-++-+.. |+.-+..
T Consensus 15 ~y~~~l~~~~~~~~~------------d~~~aeDivQd~f~~~~~~~~ 50 (75)
T d1h3la_ 15 EFLDQMYSAALRMTR------------NPADAEDLVQETYAKAYASFH 50 (75)
T ss_dssp HTHHHHHHHHHHHHS------------CHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhC------------CHHHHHHHHHHHHHHHHHhhh
Confidence 456889999999999 9999999998864 4444433
No 6
>d256ba_ a.24.3.1 (A:) Cytochrome b562 {Escherichia coli [TaxId: 562]}
Probab=33.24 E-value=53 Score=21.97 Aligned_cols=75 Identities=11% Similarity=0.065 Sum_probs=55.0
Q ss_pred cchHHhHHHHHHHHHHHhccccCCCC--CCCCCChHHHHHHHHHHHHHHHHHHhhhcCCCCCHH--HHHHHHHHHHHHH
Q psy11482 39 DRSGRLLDNLYRVIKTYVSFRHQSGN--GKDTNNKKQSEKIIKTLIKIIIKTTLLVKNHQFSST--ELTTCETLKAKFH 113 (172)
Q Consensus 39 Dtss~lLD~LYrl~K~yt~~~~~~~~--~~~~~nkkeAeKviK~lIKi~vKigvL~rn~qf~~e--El~~~~~fr~K~~ 113 (172)
+...+++++|-..+-.|....|++-- +.+.-..+.-+.=+..|+..+=+|=-+.+.|.+..- .+..+..+|++-|
T Consensus 24 ~Ei~~~m~~lr~a~~d~~~~l~~~~~~~~~~~~~~~~~~~g~d~L~~~ld~i~~la~~G~l~eAk~~l~~l~~~r~~YH 102 (106)
T d256ba_ 24 AQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRNAYH 102 (106)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCGGGTTSCTTSHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHhhccccccchHhHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHh
Confidence 45677999999999999887776533 333333344566678899999999999999998765 5566666666655
No 7
>d1kf6a1 a.7.3.1 (A:443-576) Fumarate reductase {Escherichia coli [TaxId: 562]}
Probab=31.98 E-value=72 Score=21.83 Aligned_cols=91 Identities=12% Similarity=0.112 Sum_probs=48.2
Q ss_pred chHHhHHHHHHHHHHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHhhHHH
Q psy11482 40 RSGRLLDNLYRVIKTYVSFRHQSGNGKDTNNKKQSEKIIKTLIKIIIKTTLLVKNHQFSSTELTTCETLKAKFHTLLMSL 119 (172)
Q Consensus 40 tss~lLD~LYrl~K~yt~~~~~~~~~~~~~nkkeAeKviK~lIKi~vKigvL~rn~qf~~eEl~~~~~fr~K~~~~amT~ 119 (172)
..++|-++|-+++-+|.|-- .+.-.=++|.+-++.|-.-.-++.+--.+..||.+=...+|
T Consensus 5 ~~~~ir~~Lq~~M~~~~Gv~------R~~~~L~~al~~l~~l~~~~~~~~~~~~~~~~n~~l~~~~e------------- 65 (134)
T d1kf6a1 5 NWAKIRDEMGLAMEEGCGIY------RTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE------------- 65 (134)
T ss_dssp CHHHHHHHHHHHHHHHSSSS------BCHHHHHHHHHHHHHHHHHHTTBCCCCCCCSSCHHHHHHHH-------------
T ss_pred CHHHHHHHHHHHHHhCCCEE------ECHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHH-------------
Confidence 45677888888888887610 01111123333444433333334444444455543222111
Q ss_pred hhhccccccccHHHHHHHHHHHHHHHHHHHhhcCCcchhhhhhH
Q psy11482 120 ISFYEVDFSYDAAYLIRQLTTLRSQLAGLLQRHLTSKNLTNLDN 163 (172)
Q Consensus 120 iSF~eVdfTfD~~~L~~~L~ecr~lL~~lv~~HLT~KS~~Ri~~ 163 (172)
|...|.-|+-++..+..|.=|==+|-|.|+
T Consensus 66 --------------l~n~l~~a~~i~~aAl~R~ESRG~H~R~D~ 95 (134)
T d1kf6a1 66 --------------LGHGLNVAECMAHSAMARKESRGAHQRLDE 95 (134)
T ss_dssp --------------HHHHHHHHHHHHHHHHHCCSCBTTBCBCST
T ss_pred --------------HHHHHHHHHHHHHHHHcccccccccccccC
Confidence 445566677777777777777777777664
No 8
>d1o3xa_ a.7.8.1 (A:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.76 E-value=73 Score=21.48 Aligned_cols=75 Identities=12% Similarity=0.130 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHhhh-------cCCCCCHHHHHHHHHHHHHHHHhhHHHhhhccccccccHHHHHHHHHHHHHHHHHH
Q psy11482 76 KIIKTLIKIIIKTTLLV-------KNHQFSSTELTTCETLKAKFHTLLMSLISFYEVDFSYDAAYLIRQLTTLRSQLAGL 148 (172)
Q Consensus 76 KviK~lIKi~vKigvL~-------rn~qf~~eEl~~~~~fr~K~~~~amT~iSF~eVdfTfD~~~L~~~L~ecr~lL~~l 148 (172)
|.+.+|=++--++-+|- ..+...+++.+.+.++-..|++.--++..+-+ +.+=|-..|..+|. +.|.|.++
T Consensus 22 k~~~eLe~v~~n~~lL~eML~~~~~~~~~~~~~~ell~eL~~~c~~~qp~i~~li~-~~~ddee~l~elL~-~ND~L~~v 99 (112)
T d1o3xa_ 22 KRVNAIEEVNNNVKLLTEMVMSHSQGGAAAGSSEDLMKELYQRCERMRPTLFRLAS-DTEDNDEALAEILQ-ANDNLTQV 99 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHT-TCTTCHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHh-hcCCcHHHHHHHHH-HHHHHHHH
Confidence 33445555544444442 24577788889999999999999999999865 33335566666654 99999999
Q ss_pred Hhhc
Q psy11482 149 LQRH 152 (172)
Q Consensus 149 v~~H 152 (172)
+.+|
T Consensus 100 l~rY 103 (112)
T d1o3xa_ 100 INLY 103 (112)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9887
No 9
>d1j2pa_ d.153.1.4 (A:) Proteasome alpha subunit (non-catalytic) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=30.46 E-value=38 Score=24.91 Aligned_cols=48 Identities=13% Similarity=0.122 Sum_probs=33.2
Q ss_pred CCChHHHHHHHHHHHHHHHH---------HHhhhcCC----CCCHHHHH-HHHHHHHHHHHh
Q psy11482 68 TNNKKQSEKIIKTLIKIIIK---------TTLLVKNH----QFSSTELT-TCETLKAKFHTL 115 (172)
Q Consensus 68 ~~nkkeAeKviK~lIKi~vK---------igvL~rn~----qf~~eEl~-~~~~fr~K~~~~ 115 (172)
.++.+||.++....++.++. ||++.+++ .++++|++ .++++-++..++
T Consensus 179 ~ms~eeai~la~~~l~~~~~~d~~~~~iei~iv~~~~~~~~~l~~~ei~~~~~~~~e~~~~~ 240 (243)
T d1j2pa_ 179 DLSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVERANERIREL 240 (243)
T ss_dssp TCCHHHHHHHHHHHHHHHHTSCCCGGGEEEEEEETTTCCCEECCHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcccCCCceEEEEEEeCCCcEEECCHHHHHHHHHHHHHHHHHH
Confidence 46899999998888887553 55666554 36888876 455555555544
No 10
>d2au5a1 a.244.1.1 (A:1-132) Hypothetical protein EF2947 {Enterococcus faecalis [TaxId: 1351]}
Probab=29.92 E-value=64 Score=23.07 Aligned_cols=52 Identities=23% Similarity=0.399 Sum_probs=41.2
Q ss_pred hhhhccc----chHHhHHHHHHHHHHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHH
Q psy11482 33 VKMYIDD----RSGRLLDNLYRVIKTYVSFRHQSGNGKDTNNKKQSEKIIKTLIKIIIKTTLLVKNHQFSSTELTTCETL 108 (172)
Q Consensus 33 ~k~fIDD----tss~lLD~LYrl~K~yt~~~~~~~~~~~~~nkkeAeKviK~lIKi~vKigvL~rn~qf~~eEl~~~~~f 108 (172)
+..++|| .+.+|.|++-++.+.|-. .|...+++.|-.+--.+
T Consensus 67 V~SL~~~~N~~~~~~L~~E~~~Li~LY~~----------------------------------~~~~~LT~N~~~L~~~i 112 (132)
T d2au5a1 67 VQSLLEDENFSSVEQLKGELARLIRLYFA----------------------------------LAKDNLTENQESLYVDL 112 (132)
T ss_dssp HHHHTTCTTCSSHHHHHHHHHHHHHHHHH----------------------------------HHTTCCCHHHHHHHHHH
T ss_pred HHHHhccCCcCcHHHHHHHHHHHHHHHHH----------------------------------HHHhhccccchhhhhhH
Confidence 3445554 578899999999999976 35678899999999999
Q ss_pred HHHHHHhhHH
Q psy11482 109 KAKFHTLLMS 118 (172)
Q Consensus 109 r~K~~~~amT 118 (172)
.+||-.+.++
T Consensus 113 ~DKF~~LLL~ 122 (132)
T d2au5a1 113 FDKFTFLLLC 122 (132)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHc
Confidence 9999877665
No 11
>d2hqsc1 d.79.7.1 (C:68-173) Peptidoglycan-associated lipoprotein, PAL, periplasmic domain {Escherichia coli [TaxId: 562]}
Probab=28.07 E-value=27 Score=22.48 Aligned_cols=54 Identities=15% Similarity=0.236 Sum_probs=37.1
Q ss_pred cccchHHhHHHHHHHHHHHhccc-----cCCCCCCCCCChHHHHHHHHHHHHHHHHHHh
Q psy11482 37 IDDRSGRLLDNLYRVIKTYVSFR-----HQSGNGKDTNNKKQSEKIIKTLIKIIIKTTL 90 (172)
Q Consensus 37 IDDtss~lLD~LYrl~K~yt~~~-----~~~~~~~~~~nkkeAeKviK~lIKi~vKigv 90 (172)
|...+...|+.|..+++++.... |-...|...+|..-+++=.+.+.+..++.||
T Consensus 13 l~~~~~~~L~~l~~~l~~~~~~~i~I~GhtD~~g~~~~N~~LS~~RA~~V~~~L~~~Gi 71 (106)
T d2hqsc1 13 IRSDFAQMLDAHANFLRSNPSYKVTVEGHADERGTPEYNISLGERRANAVKMYLQGKGV 71 (106)
T ss_dssp CCGGGHHHHHHHHHHHHHCTTCCEEEEECCCSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHHHhCCCcEEEEEecccccchhhhhhhHHHHHHhHHHHHHHhcCC
Confidence 56677888999999888864321 3345566677777666666667777677675
No 12
>d1np7a2 c.28.1.1 (A:1-204) Cryptochrome {Synechocystis sp., pcc 6803 [TaxId: 1143]}
Probab=25.10 E-value=24 Score=25.05 Aligned_cols=74 Identities=14% Similarity=0.186 Sum_probs=53.3
Q ss_pred hHHHHHHHHHHHhccccCCCCCCCCCChHHHHHHHHHHHHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHhhHHHhhhc
Q psy11482 44 LLDNLYRVIKTYVSFRHQSGNGKDTNNKKQSEKIIKTLIKIIIKTTLLVKNHQFSSTELTTCETLKAKFHTLLMSLISFY 123 (172)
Q Consensus 44 lLD~LYrl~K~yt~~~~~~~~~~~~~nkkeAeKviK~lIKi~vKigvL~rn~qf~~eEl~~~~~fr~K~~~~amT~iSF~ 123 (172)
+++.|-.|.++... -++.=..-.-++..++..+++- .++.-++-|...+.+|.+.-+.+++.|......+.+|.
T Consensus 63 l~~sL~~L~~~L~~-----~g~~L~v~~G~~~~~l~~l~~~-~~i~~V~~n~~~~~~e~~rd~~v~~~l~~~~i~~~~~~ 136 (204)
T d1np7a2 63 LQQSVQNLAESLQK-----VGNKLLVTTGLPEQVIPQIAKQ-INAKTIYYHREVTQEELDVERNLVKQLTILGIEAKGYW 136 (204)
T ss_dssp HHHHHHHHHHHHHH-----TTCCEEEEESCHHHHHHHHHHH-TTEEEEEEECCCSHHHHHHHHHHHHHHHHHTCEEEEEC
T ss_pred HHHHHHHHHHHHHh-----ccchhhhhhhhhHHHHHHHHHH-hhhhheeeeccccHHHHHHHHHHhhhhccceeeeEecc
Confidence 77777777777654 1122222234677788888874 46777999999999999999999999988766666653
No 13
>d1l5ja1 a.118.15.1 (A:1-160) Aconitase B, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=22.70 E-value=35 Score=25.35 Aligned_cols=47 Identities=19% Similarity=0.386 Sum_probs=33.0
Q ss_pred HHhhhccccchhhhhcc---c-chHH-----------hHHHHHHHHHHHhccccCCCCCCCCCChHHHHHHHHH
Q psy11482 22 KLASKMSNKSMVKMYID---D-RSGR-----------LLDNLYRVIKTYVSFRHQSGNGKDTNNKKQSEKIIKT 80 (172)
Q Consensus 22 Kllskmask~~~k~fID---D-tss~-----------lLD~LYrl~K~yt~~~~~~~~~~~~~nkkeAeKviK~ 80 (172)
++||.|-+--.++.+|| | ..++ ++|..+++.+.|.. +.+-|++|++.
T Consensus 88 eLLgtM~GGynV~~LidlL~d~~la~~Aa~~Lk~tvlvyd~f~dv~~~~k~------------gN~~Ak~vl~S 149 (160)
T d1l5ja1 88 ELLGTMQGGYNIHPLIDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKA------------GNEYAKQVMQS 149 (160)
T ss_dssp HHHTTSCSSTTHHHHHHGGGCTTTHHHHHHHHHTCCTTTTHHHHHHHHHHT------------TCHHHHHHHHH
T ss_pred HHHHHhcCCCcHHHHHHHHccHhhhHHHHHHHhhhHHHHhhHHHHHHHHHh------------CCHHHHHHHHH
Confidence 59999997777776664 2 2122 57888999998875 46678777753
No 14
>d1j2jb_ a.7.8.1 (B:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.45 E-value=12 Score=22.54 Aligned_cols=13 Identities=23% Similarity=0.588 Sum_probs=10.2
Q ss_pred hHHHHHHHHHHHH
Q psy11482 71 KKQSEKIIKTLIK 83 (172)
Q Consensus 71 kkeAeKviK~lIK 83 (172)
=.+|-++||++||
T Consensus 23 LqaANrLIK~mVk 35 (41)
T d1j2jb_ 23 LRAANKLIKEMVQ 35 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 3578888888887
No 15
>d1swya_ d.2.1.3 (A:) Phage T4 lysozyme {Bacteriophage T4 [TaxId: 10665]}
Probab=21.61 E-value=37 Score=23.52 Aligned_cols=42 Identities=10% Similarity=0.105 Sum_probs=26.1
Q ss_pred CCCCChHHHHHHHHHHHHHHHHHH-----hhhcCCCCCHHHHHHHHH
Q psy11482 66 KDTNNKKQSEKIIKTLIKIIIKTT-----LLVKNHQFSSTELTTCET 107 (172)
Q Consensus 66 ~~~~nkkeAeKviK~lIKi~vKig-----vL~rn~qf~~eEl~~~~~ 107 (172)
.+.+++.+|+++..+-|+.+++-. +....+.+++.+...+-.
T Consensus 55 g~~it~~~a~~ll~~dl~~~~~~~~~~~~~~~~~~~l~~~~~~alvs 101 (164)
T d1swya_ 55 NGVITKDEAEKLFNQDVAAAVRGILRNAKLKPVYDSLDAVRECALIN 101 (164)
T ss_dssp TTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHHH
T ss_pred CceecHHHHHHHHHHHHHHHHHHHHHHhccccCcccCCHHHHHHHee
Confidence 356889999999988888877632 112223466665544443
No 16
>d2bw3a1 a.270.1.1 (A:79-162) Transposase Hermes, dimerisation domain {House fly (Musca domestica) [TaxId: 7370]}
Probab=20.53 E-value=38 Score=22.95 Aligned_cols=24 Identities=25% Similarity=0.315 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHhhhcCCCCCHHHH
Q psy11482 78 IKTLIKIIIKTTLLVKNHQFSSTEL 102 (172)
Q Consensus 78 iK~lIKi~vKigvL~rn~qf~~eEl 102 (172)
+|+++++.++||.-| ..+.+.+||
T Consensus 39 lkklv~~fl~iGA~y-G~nv~vddL 62 (84)
T d2bw3a1 39 FIDMIKFFIKVKAEY-GEHVNVEEL 62 (84)
T ss_dssp HHHHHHHHHHHHHHH-CSCBCHHHH
T ss_pred HHHHHHHHHHHhHHh-cccCCHhHc
Confidence 689999999999999 677788874
No 17
>d1auaa1 a.5.3.1 (A:4-96) N-terminal domain of phosphatidylinositol transfer protein sec14p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.10 E-value=91 Score=20.21 Aligned_cols=38 Identities=16% Similarity=0.127 Sum_probs=27.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHhhHHHhhhccccccccHHHHHHHHHH
Q psy11482 95 HQFSSTELTTCETLKAKFHTLLMSLISFYEVDFSYDAAYLIRQLTT 140 (172)
Q Consensus 95 ~qf~~eEl~~~~~fr~K~~~~amT~iSF~eVdfTfD~~~L~~~L~e 140 (172)
+.++++|.+.+.+||+.+..... .-.+|-.+|.+-|.-
T Consensus 24 g~Lt~~q~~~L~elr~~l~~~~~--------~~~~DD~~llRfLrA 61 (93)
T d1auaa1 24 GNLDSAQEKALAELRKLLEDAGF--------IERLDDSTLLRFLRA 61 (93)
T ss_dssp TTCCTTHHHHHHHHHHHHHHTTC--------CSSCSHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHHHHCCC--------CCCCCHHHHHHHHHH
Confidence 56899999999999998876431 124577778777753
Done!