Psyllid ID: psy11487

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-
Protein Sequence
MALLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTGRWLPVLVKLLYM
Secondary Structure (PSIPRED)
cEEEEEccHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHcccEEEEEEcccccccHHHHHHHHHHHHHHHHHcccccEEEEEEcc
Secondary Structure Prediction (SSPRO)
cEEEEEccHHHHHHHHHHHHHHHHHccccccccccccccHHHEEHHHHHHHHHHHccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEc
Coil and Loop (DISEMBL)
mallvlgdpedvknneDKIYSIAKRyggipagesngrrgYMLTYIIAYIRDFACdyyfigdsfetsvpwdkTVLLCINVKKRLtrectgrwLPVLVKLLYM
Flexible Loop (DISEMBL)
mallvlgdpedvknnEDKIYSIakryggipagesngrRGYMLTYIIAYIRDFACDYYFIGDSfetsvpwdkTVLLCINVKkrltrectgrwlpvlvkllym
Low Complexity Region (SEG)
MALLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTGRWLPVLVKLLYM
Disordered region (IsUnstruct)
*****************KIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTGRWLPVLVKLLY*
Disordered Region (DISOPRED)
MALLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTGRWLPVLVKLLYM
Disordered Region (DISEMBL)
MALLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTGRWLPVLVKLLYM
Disordered Region (DISPRO)
MALLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTGRWLPVLVKLLYM
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MALLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTGRWLPVLVKLLYM
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	101	2.2.26 [Sep-21-2011]
O00116	658	Alkyldihydroxyacetonephos	yes	N/A	0.841	0.129	0.611	7e-28
Q8C0I1	645	Alkyldihydroxyacetonephos	yes	N/A	0.871	0.136	0.579	4e-27
P97275	658	Alkyldihydroxyacetonephos	yes	N/A	0.841	0.129	0.588	1e-26
Q9EQR2	644	Alkyldihydroxyacetonephos	yes	N/A	0.871	0.136	0.556	1e-26
Q9V778	631	Alkyldihydroxyacetonephos	yes	N/A	0.871	0.139	0.534	6e-23
O45218	597	Alkyldihydroxyacetonephos	yes	N/A	0.881	0.149	0.428	4e-17

>sp|O00116|ADAS_HUMAN Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo sapiens GN=AGPS PE=1 SV=1

 Score =  122 bits (306), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 52/85 (61%), Positives = 67/85 (78%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 527

Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+TREC
Sbjct: 528 FETSAPWDRVVDLCRNVKERITREC 552

Homo sapiens (taxid: 9606)
EC: 2EC: .EC: 5EC: .EC: 1EC: .EC: 2EC: 6

>sp|Q8C0I1|ADAS_MOUSE Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus musculus GN=Agps PE=1 SV=1

 Score =  120 bits (300), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 51/88 (57%), Positives = 66/88 (75%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY IG+S
Sbjct: 455 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYVIGES 514

Query: 63  FETSVPWDKTVLLCINVKKRLTRECTGR 90
           FETS PWD+ + LC NVK+R+ REC  R
Sbjct: 515 FETSAPWDRVIDLCRNVKERIRRECKER 542

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|P97275|ADAS_CAVPO Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia porcellus GN=AGPS PE=1 SV=1

 Score =  118 bits (296), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 50/85 (58%), Positives = 65/85 (76%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY IG+S
Sbjct: 468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGES 527

Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+ REC
Sbjct: 528 FETSAPWDRVVDLCRNVKERIRREC 552

Cavia porcellus (taxid: 10141)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q9EQR2|ADAS_RAT Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus norvegicus GN=Agps PE=2 SV=1

 Score =  118 bits (295), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 49/88 (55%), Positives = 66/88 (75%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY +G+S
Sbjct: 454 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYVVGES 513

Query: 63  FETSVPWDKTVLLCINVKKRLTRECTGR 90
           FETS PWD+ + LC NVK+R+ REC  R
Sbjct: 514 FETSAPWDRVIDLCRNVKERIRRECKER 541

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|Q9V778|ADAS_DROME Alkyldihydroxyacetonephosphate synthase OS=Drosophila melanogaster GN=CG10253 PE=2 SV=1

 Score =  105 bits (263), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 47/88 (53%), Positives = 62/88 (70%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD +DV+  E  IY IA+++ G PAG  NG RGY+LT++IAYIRDF      + +S
Sbjct: 420 LLFEGDLKDVQRQEALIYEIAEKFQGFPAGGQNGERGYILTFVIAYIRDFGLHQGIVAES 479

Query: 63  FETSVPWDKTVLLCINVKKRLTRECTGR 90
           FETSVPWD+  LLC +VK+R+  EC+ R
Sbjct: 480 FETSVPWDRCSLLCRSVKQRVVSECSKR 507

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

>sp|O45218|ADAS_CAEEL Alkyldihydroxyacetonephosphate synthase OS=Caenorhabditis elegans GN=ads-1 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 39/91 (42%), Positives = 62/91 (68%), Gaps = 2/91 (2%)

Query: 7   GDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETS 66
           G+ E+V  +E+++  +A+++ G+  G  NG+ GY LT+ IAY+RD   ++  +G+SFETS
Sbjct: 401 GNREEVDQHEERLNKLAEQFHGVVGGAENGQYGYRLTFAIAYLRDLGMNHGVLGESFETS 460

Query: 67  VPWDKTVLLCINVKKRLTRECTGRWL--PVL 95
           VPWDK + LC NVK+ + RE   + +  PVL
Sbjct: 461 VPWDKVLSLCRNVKELMKREAKAQGVTHPVL 491

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 5

EC: .

EC: 1

EC: .

EC: 2

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
147907126	627	alkyldihydroxyacetonephosphate synthase,	0.871	0.140	0.590	3e-26
390464348	568	PREDICTED: alkyldihydroxyacetonephosphat	0.841	0.149	0.611	3e-26
390464346	652	PREDICTED: alkyldihydroxyacetonephosphat	0.841	0.130	0.611	3e-26
441668210	656	PREDICTED: alkyldihydroxyacetonephosphat	0.841	0.129	0.611	3e-26
426337844	626	PREDICTED: alkyldihydroxyacetonephosphat	0.841	0.135	0.611	3e-26
403258679	652	PREDICTED: alkyldihydroxyacetonephosphat	0.841	0.130	0.611	3e-26
402888755	660	PREDICTED: alkyldihydroxyacetonephosphat	0.841	0.128	0.611	3e-26
397489093	658	PREDICTED: alkyldihydroxyacetonephosphat	0.841	0.129	0.611	3e-26
380798535	631	alkyldihydroxyacetonephosphate synthase,	0.841	0.134	0.611	3e-26
355750655	584	hypothetical protein EGM_04101, partial	0.841	0.145	0.611	3e-26

>gi|147907126|ref|NP_001086573.1| alkyldihydroxyacetonephosphate synthase, peroxisomal [Xenopus laevis] gi|49903684|gb|AAH76825.1| Agps-prov protein [Xenopus laevis]

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/88 (59%), Positives = 67/88 (76%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGYMLT++IAY+RD   DYY IG+S
Sbjct: 437 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYMLTFVIAYLRDLGMDYYLIGES 496

Query: 63  FETSVPWDKTVLLCINVKKRLTRECTGR 90
           FETSVPWD+ + LC NVK+R+ REC  R
Sbjct: 497 FETSVPWDRVLDLCRNVKERIVRECKER 524

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|390464348|ref|XP_003733208.1| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal isoform 2 [Callithrix jacchus]

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/85 (61%), Positives = 67/85 (78%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 378 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 437

Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+TREC
Sbjct: 438 FETSAPWDRVVDLCKNVKERITREC 462

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|390464346|ref|XP_002749324.2| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal isoform 1 [Callithrix jacchus]

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/85 (61%), Positives = 67/85 (78%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 462 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 521

Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+TREC
Sbjct: 522 FETSAPWDRVVDLCKNVKERITREC 546

Source: Callithrix jacchus

Species: Callithrix jacchus

Genus: Callithrix

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|441668210|ref|XP_003253813.2| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal isoform 1 [Nomascus leucogenys]

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/85 (61%), Positives = 67/85 (78%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 466 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 525

Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+TREC
Sbjct: 526 FETSAPWDRVVDLCRNVKERITREC 550

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|426337844|ref|XP_004032904.1| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal [Gorilla gorilla gorilla]

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/85 (61%), Positives = 67/85 (78%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 436 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 495

Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+TREC
Sbjct: 496 FETSAPWDRVVDLCRNVKERITREC 520

Source: Gorilla gorilla gorilla

Species: Gorilla gorilla

Genus: Gorilla

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|403258679|ref|XP_003921880.1| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal isoform 1 [Saimiri boliviensis boliviensis]

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/85 (61%), Positives = 67/85 (78%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 462 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 521

Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+TREC
Sbjct: 522 FETSAPWDRVVDLCRNVKERITREC 546

Source: Saimiri boliviensis boliviensis

Species: Saimiri boliviensis

Genus: Saimiri

Family: Cebidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|402888755|ref|XP_003907714.1| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal [Papio anubis]

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/85 (61%), Positives = 67/85 (78%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 470 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 529

Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+TREC
Sbjct: 530 FETSAPWDRVVDLCRNVKERITREC 554

Source: Papio anubis

Species: Papio anubis

Genus: Papio

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|397489093|ref|XP_003815571.1| PREDICTED: alkyldihydroxyacetonephosphate synthase, peroxisomal isoform 1 [Pan paniscus]

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/85 (61%), Positives = 67/85 (78%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 527

Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+TREC
Sbjct: 528 FETSAPWDRVVDLCRNVKERITREC 552

Source: Pan paniscus

Species: Pan paniscus

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|380798535|gb|AFE71143.1| alkyldihydroxyacetonephosphate synthase, peroxisomal precursor, partial [Macaca mulatta]

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/85 (61%), Positives = 67/85 (78%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 441 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 500

Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+TREC
Sbjct: 501 FETSAPWDRVVDLCRNVKERITREC 525

Source: Macaca mulatta

Species: Macaca mulatta

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|355750655|gb|EHH54982.1| hypothetical protein EGM_04101, partial [Macaca fascicularis]

 Score =  122 bits (306), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 52/85 (61%), Positives = 67/85 (78%)

Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct: 394 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 453

Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+TREC
Sbjct: 454 FETSAPWDRVVDLCRNVKERITREC 478

Source: Macaca fascicularis

Species: Macaca fascicularis

Genus: Macaca

Family: Cercopithecidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
UNIPROTKB|O00116	658	AGPS "Alkyldihydroxyacetonepho	0.841	0.129	0.611	5.1e-25
UNIPROTKB|E1BPV2	576	AGPS "Uncharacterized protein"	0.841	0.147	0.6	7.5e-25
UNIPROTKB|E2QVV9	653	AGPS "Uncharacterized protein"	0.841	0.130	0.6	1.1e-24
UNIPROTKB|F6Y1U6	663	AGPS "Uncharacterized protein"	0.841	0.128	0.6	1.1e-24
UNIPROTKB|J9NZ69	699	AGPS "Uncharacterized protein"	0.841	0.121	0.6	1.3e-24
UNIPROTKB|I3LM15	646	AGPS "Uncharacterized protein"	0.841	0.131	0.6	1.3e-24
UNIPROTKB|F1P5J7	638	AGPS "Uncharacterized protein"	0.841	0.133	0.6	1.7e-24
MGI|MGI:2443065	645	Agps "alkylglycerone phosphate	0.871	0.136	0.579	2.8e-24
UNIPROTKB|P97275	658	AGPS "Alkyldihydroxyacetonepho	0.841	0.129	0.588	6.2e-24
RGD|620364	644	Agps "alkylglycerone phosphate	0.871	0.136	0.556	7.6e-24

UNIPROTKB|O00116 AGPS "Alkyldihydroxyacetonephosphate synthase, peroxisomal" [Homo sapiens (taxid:9606)]

 Score = 293 (108.2 bits), Expect = 5.1e-25, P = 5.1e-25
 Identities = 52/85 (61%), Positives = 67/85 (78%)

Query:     3 LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
             LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD A +YY +G+S
Sbjct:   468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLALEYYVLGES 527

Query:    63 FETSVPWDKTVLLCINVKKRLTREC 87
             FETS PWD+ V LC NVK+R+TREC
Sbjct:   528 FETSAPWDRVVDLCRNVKERITREC 552

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0008611 "ether lipid biosynthetic process" evidence=IEA;ISS;TAS

GO:0071949 "FAD binding" evidence=ISS

GO:0005777 "peroxisome" evidence=IDA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IDA

GO:0005778 "peroxisomal membrane" evidence=IDA

GO:0008610 "lipid biosynthetic process" evidence=IDA

GO:0005782 "peroxisomal matrix" evidence=TAS

GO:0044255 "cellular lipid metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

GO:0043231 "intracellular membrane-bounded organelle" evidence=IDA

UNIPROTKB|E1BPV2 AGPS "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 290 (107.1 bits), Expect = 7.5e-25, P = 7.5e-25
 Identities = 51/85 (60%), Positives = 66/85 (77%)

Query:     3 LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
             LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY +G+S
Sbjct:   386 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYILGES 445

Query:    63 FETSVPWDKTVLLCINVKKRLTREC 87
             FETS PWD+ V LC NVK+R+TREC
Sbjct:   446 FETSAPWDRVVDLCRNVKERITREC 470

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

UNIPROTKB|E2QVV9 AGPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 290 (107.1 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 51/85 (60%), Positives = 66/85 (77%)

Query:     3 LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
             LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY +G+S
Sbjct:   463 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYILGES 522

Query:    63 FETSVPWDKTVLLCINVKKRLTREC 87
             FETS PWD+ V LC NVK+R+TREC
Sbjct:   523 FETSAPWDRVVDLCRNVKERITREC 547

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

UNIPROTKB|F6Y1U6 AGPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 290 (107.1 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 51/85 (60%), Positives = 66/85 (77%)

Query:     3 LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
             LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY +G+S
Sbjct:   473 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYILGES 532

Query:    63 FETSVPWDKTVLLCINVKKRLTREC 87
             FETS PWD+ V LC NVK+R+TREC
Sbjct:   533 FETSAPWDRVVDLCRNVKERITREC 557

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

UNIPROTKB|J9NZ69 AGPS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 290 (107.1 bits), Expect = 1.3e-24, P = 1.3e-24
 Identities = 51/85 (60%), Positives = 66/85 (77%)

Query:     3 LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
             LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY +G+S
Sbjct:   469 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYILGES 528

Query:    63 FETSVPWDKTVLLCINVKKRLTREC 87
             FETS PWD+ V LC NVK+R+TREC
Sbjct:   529 FETSAPWDRVVDLCRNVKERITREC 553

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

UNIPROTKB|I3LM15 AGPS "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 289 (106.8 bits), Expect = 1.3e-24, P = 1.3e-24
 Identities = 51/85 (60%), Positives = 66/85 (77%)

Query:     3 LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
             LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY +G+S
Sbjct:   496 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYVLGES 555

Query:    63 FETSVPWDKTVLLCINVKKRLTREC 87
             FETS PWD+ V LC NVK+R+TREC
Sbjct:   556 FETSAPWDRVVDLCRNVKERITREC 580

GO:0008610 "lipid biosynthetic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

UNIPROTKB|F1P5J7 AGPS "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 288 (106.4 bits), Expect = 1.7e-24, P = 1.7e-24
 Identities = 51/85 (60%), Positives = 66/85 (77%)

Query:     3 LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
             LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGYMLT++IAY+RD   DYY IG+S
Sbjct:   448 LLFEGDREKVLQHEKQVYDIATKFGGLAAGEDNGQRGYMLTFVIAYLRDLGLDYYVIGES 507

Query:    63 FETSVPWDKTVLLCINVKKRLTREC 87
             FETSVPWD+ + LC NVK+R+ REC
Sbjct:   508 FETSVPWDRVLDLCRNVKERIVREC 532

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005778 "peroxisomal membrane" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IEA

GO:0008610 "lipid biosynthetic process" evidence=IEA

MGI|MGI:2443065 Agps "alkylglycerone phosphate synthase" [Mus musculus (taxid:10090)]

 Score = 286 (105.7 bits), Expect = 2.8e-24, P = 2.8e-24
 Identities = 51/88 (57%), Positives = 66/88 (75%)

Query:     3 LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
             LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAYIRD   +YY IG+S
Sbjct:   455 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIRDLGLEYYVIGES 514

Query:    63 FETSVPWDKTVLLCINVKKRLTRECTGR 90
             FETS PWD+ + LC NVK+R+ REC  R
Sbjct:   515 FETSAPWDRVIDLCRNVKERIRRECKER 542

GO:0003824 "catalytic activity" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0005777 "peroxisome" evidence=ISO

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=ISO

GO:0008610 "lipid biosynthetic process" evidence=ISO

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016614 "oxidoreductase activity, acting on CH-OH group of donors" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0050660 "flavin adenine dinucleotide binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

UNIPROTKB|P97275 AGPS "Alkyldihydroxyacetonephosphate synthase, peroxisomal" [Cavia porcellus (taxid:10141)]

 Score = 283 (104.7 bits), Expect = 6.2e-24, P = 6.2e-24
 Identities = 50/85 (58%), Positives = 65/85 (76%)

Query:     3 LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
             LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY IG+S
Sbjct:   468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGES 527

Query:    63 FETSVPWDKTVLLCINVKKRLTREC 87
             FETS PWD+ V LC NVK+R+ REC
Sbjct:   528 FETSAPWDRVVDLCRNVKERIRREC 552

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=IDA

GO:0008611 "ether lipid biosynthetic process" evidence=IDA

GO:0071949 "FAD binding" evidence=IDA

RGD|620364 Agps "alkylglycerone phosphate synthase" [Rattus norvegicus (taxid:10116)]

 Score = 282 (104.3 bits), Expect = 7.6e-24, P = 7.6e-24
 Identities = 49/88 (55%), Positives = 66/88 (75%)

Query:     3 LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
             LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY +G+S
Sbjct:   454 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYVVGES 513

Query:    63 FETSVPWDKTVLLCINVKKRLTRECTGR 90
             FETS PWD+ + LC NVK+R+ REC  R
Sbjct:   514 FETSAPWDRVIDLCRNVKERIRRECKER 541

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005777 "peroxisome" evidence=ISO;IDA;TAS

GO:0005778 "peroxisomal membrane" evidence=ISO

GO:0008609 "alkylglycerone-phosphate synthase activity" evidence=ISO;IDA

GO:0008610 "lipid biosynthetic process" evidence=ISO

GO:0008611 "ether lipid biosynthetic process" evidence=IEA;ISS

GO:0008762 "UDP-N-acetylmuramate dehydrogenase activity" evidence=IEA

GO:0042221 "response to chemical stimulus" evidence=IEP

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0071949 "FAD binding" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9EQR2	ADAS_RAT	2, ., 5, ., 1, ., 2, 6	0.5568	0.8712	0.1366	yes	N/A
O00116	ADAS_HUMAN	2, ., 5, ., 1, ., 2, 6	0.6117	0.8415	0.1291	yes	N/A
P97275	ADAS_CAVPO	2, ., 5, ., 1, ., 2, 6	0.5882	0.8415	0.1291	yes	N/A
Q9V778	ADAS_DROME	2, ., 5, ., 1, ., 2, 6	0.5340	0.8712	0.1394	yes	N/A
Q8C0I1	ADAS_MOUSE	2, ., 5, ., 1, ., 2, 6	0.5795	0.8712	0.1364	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	101
KOG1233|consensus	613		99.84
PF02913	248	FAD-oxidase_C: FAD linked oxidases, C-terminal dom	98.65
TIGR00387	413	glcD glycolate oxidase, subunit GlcD. This protein	98.08
PRK11230	499	glycolate oxidase subunit GlcD; Provisional	97.73
PLN02805	555	D-lactate dehydrogenase [cytochrome]	97.41
COG3286	204	Uncharacterized protein conserved in archaea [Func	92.4
KOG2872|consensus	359		80.55

>KOG1233|consensus

Probab=99.84  E-value=2.1e-21  Score=155.76  Aligned_cols=97  Identities=47%  Similarity=0.887  Sum_probs=92.8

Q ss_pred             CEEEEeCChHHhHhHHHHHHHHHHHcCCCcCCCcchhhhhhhhhhhhhhhhhhhhcccceeeeecccccCchHHHHHHHH
Q psy11487          1 MALLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVK   80 (101)
Q Consensus         1 ~~~gfEG~~~~V~~~~~~~~~i~~~~GG~~~G~~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~~~l~~~v~   80 (101)
                      +++.|||+.++|+++.+++++|+.+++|+..|..+|+..|..+|.+.|+||+-+.+|++.|+|||++|||++..||++|+
T Consensus       421 ATllfEGdre~V~qhE~~~y~iAekF~G~~aG~~NGqrGY~LTfvIAYiRDlgl~~gvlgESFETSvPWDrv~~LCRnVK  500 (613)
T KOG1233|consen  421 ATLLFEGDREEVDQHEERLYKIAEKFHGVVAGAENGQRGYRLTFVIAYIRDLGLNHGVLGESFETSVPWDRVLSLCRNVK  500 (613)
T ss_pred             hhheecccHHHHHHHHHHHHHHHHHhCCccccccccccceEEEEeHHHHHhhcccccchhhcccccCCHHHHHHHHHHHH
Confidence            36789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceEE
Q psy11487         81 KRLTRECTGRWLPVLVK   97 (101)
Q Consensus        81 ~al~~~~~~~g~~~~v~   97 (101)
                      +++.++++++|..-.++
T Consensus       501 er~~rEck~~gv~~~~~  517 (613)
T KOG1233|consen  501 ERMKRECKAQGVTHPVL  517 (613)
T ss_pred             HHHHHHHHhcCCCcccc
Confidence            99999999999865543

>PF02913 FAD-oxidase_C: FAD linked oxidases, C-terminal domain; InterPro: IPR004113 Some oxygen-dependent oxidoreductases are flavoproteins that contain a covalently bound FAD group which is attached to a histidine via an 8-alpha-(N3-histidyl)-riboflavin linkage

Probab=98.65  E-value=1.3e-08  Score=73.25  Aligned_cols=87  Identities=23%  Similarity=0.258  Sum_probs=69.3

Q ss_pred             CEEEEeCChH-HhHhHHH-HHHHHHHHcCCCc----CC-CcchhhhhhhhhhhhhhhhhhhhcccceeeeecccccCchH
Q psy11487          1 MALLVLGDPE-DVKNNED-KIYSIAKRYGGIP----AG-ESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTV   73 (101)
Q Consensus         1 ~~~gfEG~~~-~V~~~~~-~~~~i~~~~GG~~----~G-~~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~~   73 (101)
                      +++.|+|+++ .++.+.+ .+.++++++|+..    .+ +...+.|...++..||+++...+.|...+|+|+++||++++
T Consensus        62 llv~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~a~~~~~~~~~W~~R~~~~~~~~~~~~~~~~~~~~~dv~vp~~~l~  141 (248)
T PF02913_consen   62 LLVEFEGSDEEAVEEQLEAEIEEICKKYGGEDVVIADDEEEQERLWAIRRAIMPYLRDAAGRAGPVWDTEDVAVPPSRLP  141 (248)
T ss_dssp             EEEECCCHHHCCHHHHHHHHHHHHHCTCTCCEEEEEHCHHCTSTHHHHHHHHCCGGGCSHCTTEEEEEEEEEESCHHHHH
T ss_pred             EEEEECCCcHHHHHHHHHHHHHHHHhhcCCceeEEeCCHHHHHhhhhhhhhhcccccccccccCCceeeeeecccchhhh
Confidence            4688999984 4666666 7888888888764    12 22346777767777899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHH
Q psy11487         74 LLCINVKKRLTREC   87 (101)
Q Consensus        74 ~l~~~v~~al~~~~   87 (101)
                      ++++.+++.+.+..
T Consensus       142 ~~~~~~~~~~~~~~  155 (248)
T PF02913_consen  142 EFLREIRALLREYG  155 (248)
T ss_dssp             HHHHHHHHHHHHCT
T ss_pred             hHHHhhhhhhhhcc
Confidence            99999988777664

The region around the histidine that binds the FAD group is conserved in these enzymes (see IPR006093 from INTERPRO).; GO: 0003824 catalytic activity, 0050660 flavin adenine dinucleotide binding; PDB: 1WVE_B 1DII_B 1WVF_A 1DIQ_A 2UUU_B 2UUV_A 1W1M_A 1E8H_B 1E0Y_B 1DZN_B ....

>TIGR00387 glcD glycolate oxidase, subunit GlcD

Probab=98.08  E-value=6.7e-06  Score=65.66  Aligned_cols=82  Identities=16%  Similarity=0.153  Sum_probs=62.2

Q ss_pred             CEEEEeCChHHhHhHHHHHHHHHHHcCCCcC----C-CcchhhhhhhhhhhhhhhhhhhhcccceeeeecccccCchHHH
Q psy11487          1 MALLVLGDPEDVKNNEDKIYSIAKRYGGIPA----G-ESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLL   75 (101)
Q Consensus         1 ~~~gfEG~~~~V~~~~~~~~~i~~~~GG~~~----G-~~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~~~l   75 (101)
                      +++.|+|+++.++.+.+++.++++++|+...    + +...+.|...++..|++++.. ...+   +.|+++||++++++
T Consensus       234 l~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~r~~~~~~~~~~~-~~~~---~~d~~vp~~~l~~~  309 (413)
T TIGR00387       234 LLVEIDGVHEAVERDEEKIEQICRKNGAVDVQIAQDEEERALLWAGRRNAFKAASKLS-PLYL---IEDGTVPRSKLPEA  309 (413)
T ss_pred             EEEEecCCcHHHHHHHHHHHHHHHhCCCceEEEeCCHHHHHHHHHHHHHhHHHHHhhC-CCcc---eeEEecCHHHHHHH
Confidence            3578999999999999999999999988532    1 234566877777778988742 2222   46799999999999


Q ss_pred             HHHHHHHHHHH
Q psy11487         76 CINVKKRLTRE   86 (101)
Q Consensus        76 ~~~v~~al~~~   86 (101)
                      ++.+++.+++.
T Consensus       310 ~~~~~~~~~~~  320 (413)
T TIGR00387       310 LRGIADIARKY  320 (413)
T ss_pred             HHHHHHHHHHc
Confidence            99997776543

This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity.

>PRK11230 glycolate oxidase subunit GlcD; Provisional

Probab=97.73  E-value=7.7e-05  Score=61.37  Aligned_cols=81  Identities=9%  Similarity=0.064  Sum_probs=58.5

Q ss_pred             CEEEEeCChHHhHhHHHHHHHHHHHcCCCcCC--C---cchhhhhhhhhhhhhhhhhhhhcccceeeeecccccCchHHH
Q psy11487          1 MALLVLGDPEDVKNNEDKIYSIAKRYGGIPAG--E---SNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLL   75 (101)
Q Consensus         1 ~~~gfEG~~~~V~~~~~~~~~i~~~~GG~~~G--~---~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~~~l   75 (101)
                      +++.|+|+++.++.+.+++.++|+++|+..+.  +   ...+.|..-+...|+++..  ..+++.  .++++||++++.+
T Consensus       291 ll~e~~g~~~~v~~~~~~l~~~~~~~g~~~~~~a~~~~~~~~~W~~R~~~~~~~~~~--~~~~~~--~dv~vP~~~l~~~  366 (499)
T PRK11230        291 LLCELDGVESDVQEDCERVNDILLKAGATDVRLAQDEAERVRFWAGRKNAFPAVGRI--SPDYYC--MDGTIPRRELPGV  366 (499)
T ss_pred             EEEEecCCchHHHHHHHHHHHHHHhcCCceEEEeCCHHHHHHHHHHHHhhHHHHHhh--CCCeeE--EeecCChHHHHHH
Confidence            35788999999999999999999999975332  1   2234666533445787762  334443  4999999999999


Q ss_pred             HHHHHHHHHH
Q psy11487         76 CINVKKRLTR   85 (101)
Q Consensus        76 ~~~v~~al~~   85 (101)
                      ++.+++...+
T Consensus       367 ~~~~~~~~~~  376 (499)
T PRK11230        367 LEGIARLSQQ  376 (499)
T ss_pred             HHHHHHHHHH
Confidence            9999775433

>PLN02805 D-lactate dehydrogenase [cytochrome]

Probab=97.41  E-value=0.00049  Score=57.55  Aligned_cols=81  Identities=14%  Similarity=0.044  Sum_probs=56.4

Q ss_pred             CEEEEeCChHHhHhHHHHHHHHHHHcCCC--cCCCcc---hhhhhhhhhhh-hhhhhhhhhcccceeeeecccccCchHH
Q psy11487          1 MALLVLGDPEDVKNNEDKIYSIAKRYGGI--PAGESN---GRRGYMLTYII-AYIRDFACDYYFIGDSFETSVPWDKTVL   74 (101)
Q Consensus         1 ~~~gfEG~~~~V~~~~~~~~~i~~~~GG~--~~G~~~---g~~W~~~rf~~-pYlRd~l~~~G~~~DTlETA~~Ws~~~~   74 (101)
                      +++.|+|+++.++.+.+.+.+||+++|+.  .+...+   .+.|. .|-.. |.+..  ...+....+.++++|||++++
T Consensus       366 Ll~e~~g~~~~~~~~~~~~~~i~~~~g~~~~~~a~~~~e~~~lW~-~R~~~~~~~~~--~~~~~~~~~~DvaVP~s~L~e  442 (555)
T PLN02805        366 LMFEFIGTEAYAREQTLIVQKIASKHNGSDFVFAEEPEAKKELWK-IRKEALWACFA--MEPKYEAMITDVCVPLSHLAE  442 (555)
T ss_pred             EEEEEecCcHHHHHHHHHHHHHHHhCCCceEEEeCCHHHHHHHHH-HHHHHHHHHhh--cCCCCceeEEEEEEEHHHHHH
Confidence            46788999999999999999999999985  222222   34465 34433 22221  223444567899999999999


Q ss_pred             HHHHHHHHHH
Q psy11487         75 LCINVKKRLT   84 (101)
Q Consensus        75 l~~~v~~al~   84 (101)
                      +++.+++.+.
T Consensus       443 ~i~~~~~~~~  452 (555)
T PLN02805        443 LISRSKKELD  452 (555)
T ss_pred             HHHHHHHHHH
Confidence            9999977664

>COG3286 Uncharacterized protein conserved in archaea [Function unknown]

Probab=92.40  E-value=0.58  Score=34.95  Aligned_cols=83  Identities=14%  Similarity=0.175  Sum_probs=58.8

Q ss_pred             EEeCChHHhHhHHHHHHHHHHHcCCCcCCCcch-----hhhhhhhhhh--hhhhhhhhhccccee----eeecccccCch
Q psy11487          4 LVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNG-----RRGYMLTYII--AYIRDFACDYYFIGD----SFETSVPWDKT   72 (101)
Q Consensus         4 gfEG~~~~V~~~~~~~~~i~~~~GG~~~G~~~g-----~~W~~~rf~~--pYlRd~l~~~G~~~D----TlETA~~Ws~~   72 (101)
                      =..|.++.++..-+.+.++.++.-+..-+...|     .--...+=+.  +-|+|.|.-+|+=++    -++|++|||.+
T Consensus        42 ~v~G~~~eireair~irel~~~vr~r~~~~~~~ly~l~~~~~~a~p~Vp~~vl~daLk~~GyrVevr~~~l~T~ap~~ev  121 (204)
T COG3286          42 NVFGTKDEIREAIRAIRELHRRVRRRLYPDRQGLYTLYRIFEEASPNVPPDVLIDALKLLGYRVEVRGGELKTNAPWSEV  121 (204)
T ss_pred             EEecchHHHHHHHHHHHHHHHHHHhhhccCccceEeeHhHHHhhcCCCCHHHHHHHHHhCCceEEeeCceeecCCCHHHH
Confidence            357888999999888888888766654333222     1111222223  289999999998764    58999999999


Q ss_pred             HHHHHHHHHHHHHH
Q psy11487         73 VLLCINVKKRLTRE   86 (101)
Q Consensus        73 ~~l~~~v~~al~~~   86 (101)
                      ..+.+++-+..+.+
T Consensus       122 ~E~vreLse~~~E~  135 (204)
T COG3286         122 VELVRELSEVYREA  135 (204)
T ss_pred             HHHHHHHHHHHHHH
Confidence            99998887766654

>KOG2872|consensus

Probab=80.55  E-value=3.4  Score=33.05  Aligned_cols=50  Identities=12%  Similarity=0.248  Sum_probs=32.9

Q ss_pred             HHHHHHHHcCCCcCCCcchhhhhhhhhhhhhhhhhhhhcccceeeeecccccCchHHHHHHHHHHHHHHHhcCCCCceEE
Q psy11487         18 KIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKKRLTRECTGRWLPVLVK   97 (101)
Q Consensus        18 ~~~~i~~~~GG~~~G~~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~~~l~~~v~~al~~~~~~~g~~~~v~   97 (101)
                      ++.+|..+++|-. ++.   .|  .+|..||||+                           |.+++++.|.+.+.+.+-|
T Consensus       208 q~lQiFeSwageL-spe---~f--~e~s~PYl~~---------------------------I~~~Vk~rl~~~~~~~vPm  254 (359)
T KOG2872|consen  208 QALQIFESWAGEL-SPE---DF--EEFSLPYLRQ---------------------------IAEAVKKRLPELGLAPVPM  254 (359)
T ss_pred             HHHHHHHHhcccC-CHH---HH--HHhhhHHHHH---------------------------HHHHHHHhhhhhcCCCCce
Confidence            4445665665543 222   23  3678899997                           6666677777777888888


Q ss_pred             Eee
Q psy11487         98 LLY  100 (101)
Q Consensus        98 ~~~  100 (101)
                      .+|
T Consensus       255 i~f  257 (359)
T KOG2872|consen  255 ILF  257 (359)
T ss_pred             EEE
Confidence            877

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	101
4bca_A	658	Mammalian Alkyldihydroxyacetonephosphate Synthase:		8e-28
4bc7_A	658	Mammalian Alkyldihydroxyacetonephosphate Synthase:		8e-28
4bby_A	658	Mammalian Alkyldihydroxyacetonephosphate Synthase:		8e-28

>pdb|4BCA|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Tyr578phe Mutant Length = 658

Iteration: 1
 Score =  118 bits (296), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 50/85 (58%), Positives = 65/85 (76%)
Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY IG+S
Sbjct: 468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGES 527
Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+ REC
Sbjct: 528 FETSAPWDRVVDLCRNVKERIRREC 552

>pdb|4BC7|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Arg419his Mutant Length = 658

Iteration: 1
 Score =  118 bits (296), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 50/85 (58%), Positives = 65/85 (76%)
Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY IG+S
Sbjct: 468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGES 527
Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+ REC
Sbjct: 528 FETSAPWDRVVDLCRNVKERIRREC 552

>pdb|4BBY|A Chain A, Mammalian Alkyldihydroxyacetonephosphate Synthase: Wild-Type Length = 658

Iteration: 1
 Score =  118 bits (296), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 50/85 (58%), Positives = 65/85 (76%)
Query: 3   LLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDS 62
           LL  GD E V  +E ++Y IA ++GG+ AGE NG+RGY+LTY+IAY+RD   +YY IG+S
Sbjct: 468 LLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGES 527
Query: 63  FETSVPWDKTVLLCINVKKRLTREC 87
           FETS PWD+ V LC NVK+R+ REC
Sbjct: 528 FETSAPWDRVVDLCRNVKERIRREC 552

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	101
2uuu_A	584	Alkyldihydroxyacetonephosphate synthase; transfera	6e-20

>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A* Length = 584

 Score = 81.7 bits (202), Expect = 6e-20
 Identities = 20/99 (20%), Positives = 40/99 (40%), Gaps = 3/99 (3%)

Query: 1   MALLVL---GDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYY 57
           + L ++   G  + V  +   ++ I  +      G + G+      Y + YIRDF  D+ 
Sbjct: 392 VCLSIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHN 451

Query: 58  FIGDSFETSVPWDKTVLLCINVKKRLTRECTGRWLPVLV 96
              D  ET+V +     L  + K+   +    + +P  +
Sbjct: 452 MWVDVAETTVSYANLQTLWKDAKQTFVKHFKDQGIPAWI 490

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	101
2uuu_A	584	Alkyldihydroxyacetonephosphate synthase; transfera	99.42
4bby_A	658	Alkyldihydroxyacetonephosphate synthase, peroxiso;	99.23
1e8g_A	560	Vanillyl-alcohol oxidase; oxidoreductase, flavoenz	97.54
1f0x_A	571	DLDH, D-lactate dehydrogenase; oxidoreductase; HET	97.43
3pm9_A	476	Putative oxidoreductase; putative D-2-hydroxygluta	97.11
2exr_A	524	Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin	95.73
1wvf_A	520	4-cresol dehydrogenase [hydroxylating] flavoprote	94.06

>2uuu_A Alkyldihydroxyacetonephosphate synthase; transferase, lavoprotein, lipid synthesis, peroxisomal disor; HET: FAD PL3; 1.95A {Dictyostelium discoideum} PDB: 2uuv_A*

Probab=99.42  E-value=2.9e-13  Score=110.97  Aligned_cols=96  Identities=20%  Similarity=0.291  Sum_probs=88.5

Q ss_pred             CEEEEeCChHHhHhHHHHHHHHHHHcCCCcCCCcchhhhhhhhhhhhhhhhhhhhcccceeeeecccccCchHHHHHHHH
Q psy11487          1 MALLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVK   80 (101)
Q Consensus         1 ~~~gfEG~~~~V~~~~~~~~~i~~~~GG~~~G~~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~~~l~~~v~   80 (101)
                      +++.|+|+++.|+.+.+++.++|+++||...++...+.|+..|+..||+|+.++++|.+.+++||++|||++++++++++
T Consensus       395 llve~~g~~~~v~~~~~~~~~~~~~~g~~~~~~~~~~lW~~r~~~~~~l~~~~~~~g~~~~~~Dv~VP~~~l~~~~~~~~  474 (584)
T 2uuu_A          395 SIIGFEGPKKVVDFHRTSVFDILSKNAAFGLGSAPGKTWAEKRYDLPYIRDFLLDHNMWVDVAETTVSYANLQTLWKDAK  474 (584)
T ss_dssp             EEEEEEECHHHHHHHHHHHHHHHHTTTCEEEEEESTTHHHHGGGGHHHHHHHHHTTTEEEEEEEEEEEHHHHHHHHHHHH
T ss_pred             EEEEEecChHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHhhhchHHHHhhhcccCCccccceEEeeHHHHHHHHHHHH
Confidence            36789999999999999999999999998877788899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCCceE
Q psy11487         81 KRLTRECTGRWLPVLV   96 (101)
Q Consensus        81 ~al~~~~~~~g~~~~v   96 (101)
                      +.+.+.+.++|.++.+
T Consensus       475 ~~l~~~~~~~g~~~~~  490 (584)
T 2uuu_A          475 QTFVKHFKDQGIPAWI  490 (584)
T ss_dssp             HHHHHHHHTTTCCEEE
T ss_pred             HHHHhHHHhcCCeeEE
Confidence            9999999998887543

>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*

Probab=99.23  E-value=2.1e-11  Score=100.81  Aligned_cols=92  Identities=54%  Similarity=1.058  Sum_probs=87.4

Q ss_pred             EEEEeCChHHhHhHHHHHHHHHHHcCCCcCCCcchhhhhhhhhhhhhhhhhhhhcccceeeeecccccCchHHHHHHHHH
Q psy11487          2 ALLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVLLCINVKK   81 (101)
Q Consensus         2 ~~gfEG~~~~V~~~~~~~~~i~~~~GG~~~G~~~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~~~l~~~v~~   81 (101)
                      ++.|||+.+.+..+.+.+.++++++|++..++..+++|+..||..||+|+...+.+...+++||++||++++++++++++
T Consensus       467 ~~~~eg~~~~v~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~avP~~~l~~~~~~v~~  546 (658)
T 4bby_A          467 TLLFEGDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMRDLGLEYYIIGESFETSAPWDRVVDLCRNVKE  546 (658)
T ss_dssp             EEEEEECHHHHHHHHHHHHHHHHTTTCEECCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEEGGGHHHHHHHHHH
T ss_pred             HHHhcccHHHHHHHHHHHHHHHHhhCcchhhhhHHHHHHHHhhHHHHHHhhccccCCccceEEEEeeHHHHHHHHHHHHH
Confidence            57899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCC
Q psy11487         82 RLTRECTGRWLP   93 (101)
Q Consensus        82 al~~~~~~~g~~   93 (101)
                      .+.+.+.+.+..
T Consensus       547 ~l~~~~~~~g~~  558 (658)
T 4bby_A          547 RIRRECKEKGVQ  558 (658)
T ss_dssp             HHHHHHHHTTCS
T ss_pred             HHHHHHHhcCcc
Confidence            999998887653

>1e8g_A Vanillyl-alcohol oxidase; oxidoreductase, flavoenzyme, specificity; HET: FAD FCR; 2.1A {Penicillium simplicissimum} SCOP: d.58.32.1 d.145.1.1 PDB: 1e8f_A* 1e8h_A* 1qlt_A* 1qlu_A* 1vao_A* 1ahv_A* 1ahz_A* 1ahu_A* 2vao_A* 1w1j_A* 1dzn_A* 1w1l_A* 1e0y_A* 1w1k_A* 1w1m_A*

Probab=97.54  E-value=0.00015  Score=58.87  Aligned_cols=83  Identities=10%  Similarity=-0.090  Sum_probs=60.4

Q ss_pred             EEEEeCChHHhHhHHHHHHHHHHHcCCCcC--CCcc--hhhhhhhhhhh----hhhhhh---hhhcccceeeeeccccc-
Q psy11487          2 ALLVLGDPEDVKNNEDKIYSIAKRYGGIPA--GESN--GRRGYMLTYII----AYIRDF---ACDYYFIGDSFETSVPW-   69 (101)
Q Consensus         2 ~~gfEG~~~~V~~~~~~~~~i~~~~GG~~~--G~~~--g~~W~~~rf~~----pYlRd~---l~~~G~~~DTlETA~~W-   69 (101)
                      ++.|+|+++.|+.+.+++.++|+++|+..+  .+.+  .+.|.. |+..    |+++..   .|..|=...++++++|| 
T Consensus       354 ~~e~~g~~~~v~~~~~~i~~i~~~~~~~~~~~~~~~~e~~~~w~-R~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~vP~~  432 (560)
T 1e8g_A          354 YGALYGPEPIRRVLWETIKDAFSAIPGVKFYFPEDTPENSVLRV-RDKTMQGIPTYDELKWIDWLPNGAHLFFSPIAKVS  432 (560)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHHTTSTTCEEECGGGSCTTCHHHH-HHHHTTTCCCCGGGGGGGGSTTEEEEEECBEECSS
T ss_pred             EEEEeCCHHHHHHHHHHHHHHHHhCCCceeeccccchhhhhHHH-HHhhcccCchhhhhccccccCCCceEEEeeecCCC
Confidence            466999999999999999999999998533  2222  345664 7654    776653   23332235668999999 


Q ss_pred             -CchHHHHHHHHHHHHH
Q psy11487         70 -DKTVLLCINVKKRLTR   85 (101)
Q Consensus        70 -s~~~~l~~~v~~al~~   85 (101)
                       ++++++++.+++.+.+
T Consensus       433 ~~~l~~~~~~~~~~~~~  449 (560)
T 1e8g_A          433 GEDAMMQYAVTKKRCQE  449 (560)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHH
Confidence             9999999999765544

>1f0x_A DLDH, D-lactate dehydrogenase; oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: d.58.32.2 d.145.1.1

Probab=97.43  E-value=3.1e-05  Score=63.48  Aligned_cols=81  Identities=11%  Similarity=0.093  Sum_probs=59.7

Q ss_pred             EEEEeCChHHhHhHHHHHHHHHHHcCCCcC--CCcchhhhhhhhhhhh----hhhhhhhh-cccceeeeecccccCchHH
Q psy11487          2 ALLVLGDPEDVKNNEDKIYSIAKRYGGIPA--GESNGRRGYMLTYIIA----YIRDFACD-YYFIGDSFETSVPWDKTVL   74 (101)
Q Consensus         2 ~~gfEG~~~~V~~~~~~~~~i~~~~GG~~~--G~~~g~~W~~~rf~~p----YlRd~l~~-~G~~~DTlETA~~Ws~~~~   74 (101)
                      ++-|+|+....  ..+.+.+++++++|...  .+..+++|...||..+    ++|+...+ .| .+.++|||+||++++.
T Consensus       393 lve~~g~~~~~--~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~R~~~~~~~~~~r~~~~~~~g-~~~~~Dvavp~~~l~~  469 (571)
T 1f0x_A          393 LLKMAGDGVGE--AKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVE-DILALDIALRRNDTEW  469 (571)
T ss_dssp             EEEECTTHHHH--HHHHHHHHHHHSSCEEEECCHHHHHHHHHHHTTHHHHHHHHHHHTTTTEE-EEEEEEEECCTTCSCC
T ss_pred             EEEEecCcHHH--HHHHHHHHHHHcCCCeeecCccHHHHHHHHhhhhhhHHHHhhhcchhhcC-CceEEEEEecHHHhHH
Confidence            45666766532  35666778888766433  4567788888999886    88887665 33 3689999999999999


Q ss_pred             HHHHHHHHHHHH
Q psy11487         75 LCINVKKRLTRE   86 (101)
Q Consensus        75 l~~~v~~al~~~   86 (101)
                      + +.+++.+.+.
T Consensus       470 ~-~~~~~~l~~~  480 (571)
T 1f0x_A          470 Y-EHLPPEIDSQ  480 (571)
T ss_dssp             S-CCCCHHHHTT
T ss_pred             H-HHHHHHHHhh
Confidence            9 9888777654

>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}

Probab=97.11  E-value=0.0011  Score=53.00  Aligned_cols=80  Identities=10%  Similarity=-0.030  Sum_probs=57.8

Q ss_pred             CEEEEeCChHHhHhHHHHHHHHHHHcCCCcC---CC---cchhhhhhhhhhhh-hhhhhhhhcccceeeeecccccCchH
Q psy11487          1 MALLVLGDPEDVKNNEDKIYSIAKRYGGIPA---GE---SNGRRGYMLTYIIA-YIRDFACDYYFIGDSFETSVPWDKTV   73 (101)
Q Consensus         1 ~~~gfEG~~~~V~~~~~~~~~i~~~~GG~~~---G~---~~g~~W~~~rf~~p-YlRd~l~~~G~~~DTlETA~~Ws~~~   73 (101)
                      +++-|+|+++.++.+.+++.++|.++|+..-   -.   ...+-| +.|-..+ .++    ..|. ..+.++++|||+++
T Consensus       291 llve~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~a~~~~~~~~lW-~~R~~~~~~~~----~~g~-~~~~Dv~vP~~~l~  364 (476)
T 3pm9_A          291 VLIELSSPRDDARAALESILERGFEDGIVVDAAIANSVQQQQAFW-KLREEISPAQK----PEGG-SIKHDISVPVAAVP  364 (476)
T ss_dssp             EEEEEEESSSCHHHHHHHHHHHHHHTTCCCEEEECCSHHHHHHHH-HHHHTHHHHTG----GGCC-EECCEEECCGGGHH
T ss_pred             EEEEEccCcHHHHHHHHHHHHHHHhcCCCcceEEeCCHHHHHHHH-HHHHHHHHHHh----hcCC-ceeEEEEeeHHHHH
Confidence            3678899888888889999999999887431   11   123445 4454443 333    3354 68999999999999


Q ss_pred             HHHHHHHHHHHHH
Q psy11487         74 LLCINVKKRLTRE   86 (101)
Q Consensus        74 ~l~~~v~~al~~~   86 (101)
                      ++.+.+++.+.+.
T Consensus       365 ~~~~~~~~~~~~~  377 (476)
T 3pm9_A          365 QFIEQANAAVVAL  377 (476)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh
Confidence            9999998888776

>2exr_A Cytokinin dehydrogenase 7; AT5G21482.1, cytokinin oxidase/dehydrogenase, CKX, structura genomics, protein structure initiative; HET: MSE FAD; 1.70A {Arabidopsis thaliana} PDB: 2q4w_A*

Probab=95.73  E-value=0.0015  Score=52.51  Aligned_cols=67  Identities=6%  Similarity=-0.132  Sum_probs=49.5

Q ss_pred             eC-ChHHhHhHHHHHHHHHHHcCCCcCCCc----------chhhhhhhhhhhhhhhhhhhhcccceeeeecccccCchHH
Q psy11487          6 LG-DPEDVKNNEDKIYSIAKRYGGIPAGES----------NGRRGYMLTYIIAYIRDFACDYYFIGDSFETSVPWDKTVL   74 (101)
Q Consensus         6 EG-~~~~V~~~~~~~~~i~~~~GG~~~G~~----------~g~~W~~~rf~~pYlRd~l~~~G~~~DTlETA~~Ws~~~~   74 (101)
                      +| +++.++.+.+.+.++++.+||....+.          ....|...++..|.+..     .    ++++++|||++++
T Consensus       324 ~g~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~W~~R~~~~~a~~~-----~----~~Dv~VP~s~l~~  394 (524)
T 2exr_A          324 DSDSNSTIDKRVERLIGRLRFNEGLRFEVDLPYVDFLLRVKRSEEIAKENGTWETPH-----P----WLNLFVSKRDIGD  394 (524)
T ss_dssp             TTSCHHHHHHHHHHHHTTCCCCTTCEEEEEEEHHHHHTTTHHHHHHHHHTTCSSSCC-----C----CEEEEEEHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHhCCCeEeecccchhhhhhhhhhHHHHhhhhcccccCC-----C----eeEEEECHHHHHH
Confidence            78 778899999999999999999755432          22336665554444331     1    3699999999999


Q ss_pred             HHHHHHH
Q psy11487         75 LCINVKK   81 (101)
Q Consensus        75 l~~~v~~   81 (101)
                      +.+.+++
T Consensus       395 ~~~~v~~  401 (524)
T 2exr_A          395 FNRTVFK  401 (524)
T ss_dssp             HHHHCCC
T ss_pred             HHHHHHH
Confidence            9988865

>1wvf_A 4-cresol dehydrogenase [hydroxylating] flavoprote subunit; flavoprotein, electron-transfer, FAD, oxidoreductase; HET: FAD; 1.30A {Pseudomonas putida} SCOP: d.58.32.1 d.145.1.1 PDB: 1wve_A* 1dii_A* 1diq_A*

Probab=94.06  E-value=0.1  Score=41.54  Aligned_cols=80  Identities=11%  Similarity=-0.102  Sum_probs=48.6

Q ss_pred             EEEEeCChHHhHhHHHHHHHHHHHcCCCcCCCcchhhhhhhhhhhhhhhhhhh----------------hcccceeeeec
Q psy11487          2 ALLVLGDPEDVKNNEDKIYSIAKRYGGIPAGESNGRRGYMLTYIIAYIRDFAC----------------DYYFIGDSFET   65 (101)
Q Consensus         2 ~~gfEG~~~~V~~~~~~~~~i~~~~GG~~~G~~~g~~W~~~rf~~pYlRd~l~----------------~~G~~~DTlET   65 (101)
                      ++.|+|++++++.+.+.+.++|+++|+..+..   ..+.+ +-...++|..+.                ..+.+.++.-.
T Consensus       323 ~~~~~g~~~~v~~~~~~i~~~~~~~~~~~~~~---~~~~~-~~~~w~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v  398 (520)
T 1wvf_A          323 YAALYGTQEQVDVNWKIVTDVFKKLGKGRIVT---QEEAG-DTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVS  398 (520)
T ss_dssp             EEEEEESHHHHHHHHHHHHHHHHHHTCCEEEE---HHHHT-TCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEECBEE
T ss_pred             EEEEeCCHHHHHHHHHHHHHHHHHcCCeEEEe---cccch-hhhHHHHHHHhhccCchhhhhccccccCCCceEEecccc
Confidence            45599999999999999999999999864321   11111 112223333222                01222333334


Q ss_pred             ccccCchHHHHHHHHHHHHH
Q psy11487         66 SVPWDKTVLLCINVKKRLTR   85 (101)
Q Consensus        66 A~~Ws~~~~l~~~v~~al~~   85 (101)
                      ..+|++++++++.+++.+.+
T Consensus       399 p~~~~~l~~~~~~~~~~~~~  418 (520)
T 1wvf_A          399 EARGSECKKQAAMAKRVLHK  418 (520)
T ss_dssp             ESCHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHHH
Confidence            55669999999888666544

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	101
d1wvfa1	279	Flavoprotein subunit of p-cresol methylhydroxylase	97.98
d1e8ga1	287	Vanillyl-alcohol oxidase {Fungus (Penicillium simp	97.53

>d1wvfa1 d.58.32.1 (A:243-521) Flavoprotein subunit of p-cresol methylhydroxylase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Vanillyl-alcohol oxidase-like
domain: Flavoprotein subunit of p-cresol methylhydroxylase
species: Pseudomonas putida [TaxId: 303]

Probab=97.98  E-value=7.7e-06  Score=58.47  Aligned_cols=91  Identities=12%  Similarity=-0.017  Sum_probs=62.0

Q ss_pred             EEEEeCChHHhHhHHHHHHHHHHHcCCCcC---CCcch-hhhhhhh---hhhhhhhhhhhh-----cccceeeeeccccc
Q psy11487          2 ALLVLGDPEDVKNNEDKIYSIAKRYGGIPA---GESNG-RRGYMLT---YIIAYIRDFACD-----YYFIGDSFETSVPW   69 (101)
Q Consensus         2 ~~gfEG~~~~V~~~~~~~~~i~~~~GG~~~---G~~~g-~~W~~~r---f~~pYlRd~l~~-----~G~~~DTlETA~~W   69 (101)
                      ++.|+|+++.|+.+.+++.++++++||..+   ..... +.|...|   +..|+++...+.     .|.+..+-.++++|
T Consensus        82 ~~~l~G~~~~v~~~~~~i~~i~~~~~~~~~~~a~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vp~~~  161 (279)
T d1wvfa1          82 YAALYGTQEQVDVNWKIVTDVFKKLGKGRIVTQEEAGDTQPFKYRAQLMSGVPNLQEFGLYNWRGGGGSMWFAPVSEARG  161 (279)
T ss_dssp             EEEEEESHHHHHHHHHHHHHHHHHHTCCEEEEHHHHTTCTTHHHHHHHHTTCCCCGGGGGGGSSCTEEEEEECBEEESCH
T ss_pred             EEEeecCHHHHHHHHHHHHHHHHHCCCceEEeCCCHHHHHHHHHHHHhhhhhhhhhhhhHhhcCCCCCcceeeeeecCCH
Confidence            578899999999999999999999999754   11112 2233222   344666665443     34556666788999


Q ss_pred             CchHHHHHHHHHHHHHHHhcCCCCceE
Q psy11487         70 DKTVLLCINVKKRLTRECTGRWLPVLV   96 (101)
Q Consensus        70 s~~~~l~~~v~~al~~~~~~~g~~~~v   96 (101)
                      |+++++++.+++.+.+    .|.+..+
T Consensus       162 s~l~~~~~~~~~~~~~----~g~~~~~  184 (279)
T d1wvfa1         162 SECKKQAAMAKRVLHK----YGLDYVA  184 (279)
T ss_dssp             HHHHHHHHHHHHHHHH----TTCCCCE
T ss_pred             HHHHHHHHHHHHHHHH----hCCCeEE
Confidence            9999999887655544    4555443

>d1e8ga1 d.58.32.1 (A:274-560) Vanillyl-alcohol oxidase {Fungus (Penicillium simplicissimum) [TaxId: 69488]}

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: FAD-linked oxidases, C-terminal domain
family: Vanillyl-alcohol oxidase-like
domain: Vanillyl-alcohol oxidase
species: Fungus (Penicillium simplicissimum) [TaxId: 69488]

Probab=97.53  E-value=0.00011  Score=52.19  Aligned_cols=85  Identities=7%  Similarity=-0.228  Sum_probs=58.9

Q ss_pred             EEEEeCChHHhHhHHHHHHHHHHHcCCCcC----CCcchhhhhhh-hh------hhhhhhhhhhhcccceeeeecccccC
Q psy11487          2 ALLVLGDPEDVKNNEDKIYSIAKRYGGIPA----GESNGRRGYML-TY------IIAYIRDFACDYYFIGDSFETSVPWD   70 (101)
Q Consensus         2 ~~gfEG~~~~V~~~~~~~~~i~~~~GG~~~----G~~~g~~W~~~-rf------~~pYlRd~l~~~G~~~DTlETA~~Ws   70 (101)
                      .++|+|+++.|+.+.+.+.++|+++||...    .....+.|... ++      ..++......+.+...++.+++++++
T Consensus        81 ~~~l~G~~~~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  160 (287)
T d1e8ga1          81 YGALYGPEPIRRVLWETIKDAFSAIPGVKFYFPEDTPENSVLRVRDKTMQGIPTYDELKWIDWLPNGAHLFFSPIAKVSG  160 (287)
T ss_dssp             EEEEESCHHHHHHHHHHHHHHHTTSTTCEEECGGGSCTTCHHHHHHHHTTTCCCCGGGGGGGGSTTEEEEEECBEECSSH
T ss_pred             eeecccCHHHHHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHHHHHhHhhhhhhhhhHHhhcCCCCeeeeeceeccCh
Confidence            578899999999999999999999999643    11222334333 22      12344555566778888999999987


Q ss_pred             c-hHHHHHHHHHHHHHH
Q psy11487         71 K-TVLLCINVKKRLTRE   86 (101)
Q Consensus        71 ~-~~~l~~~v~~al~~~   86 (101)
                      + ++.+.+.+++...+.
T Consensus       161 ~~l~~~~~~~~~~~~~~  177 (287)
T d1e8ga1         161 EDAMMQYAVTKKRCQEA  177 (287)
T ss_dssp             HHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHc
Confidence            5 777777765554443