RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11490
(147 letters)
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 49.6 bits (117), Expect = 1e-08
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 27 ICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPYLVNVD 76
+ ++ +G AGSGKT+ +F YL D +NLD +++PY ++D
Sbjct: 1 MIVVFVGTAGSGKTTLTGEFGRYLEDNYK-VAYVNLDTGVKELPYEPSID 49
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 35.7 bits (81), Expect = 0.001
Identities = 8/45 (17%), Positives = 19/45 (42%), Gaps = 2/45 (4%)
Query: 24 SKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRD 68
+K + +V G+ G G T+ + L + N +++ +
Sbjct: 1 NKVV--VVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFGSVMFE 43
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 34.5 bits (78), Expect = 0.002
Identities = 11/60 (18%), Positives = 23/60 (38%)
Query: 22 FKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPYLVNVDPACRD 81
F +K + +++LG+ +GKT+ + K N++ D +D
Sbjct: 8 FGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKFNVWDVGGQD 67
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 34.6 bits (78), Expect = 0.002
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 26 PICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLD 63
P ++++G+ GKT KK + YL N+
Sbjct: 2 PTLIVMVGLPARGKTYISKKLTRYLNFIGVPTREFNVG 39
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 34.2 bits (77), Expect = 0.003
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 24 SKPICLIVLGMAGSGKTSFVKKFSSYLYDK 53
++P +++ G GSGKT+++ F Y D
Sbjct: 7 TQPFTVLIEGNIGSGKTTYLNHFEKYKNDI 36
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 169
Score = 33.9 bits (76), Expect = 0.003
Identities = 10/52 (19%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Query: 20 PEFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPY 71
P +K L+V+G G GK++ +F ++ +P + + ++
Sbjct: 3 PTYK-----LVVVGDGGVGKSALTIQFFQKIFVPDYDPTIEDSYLKHTEIDN 49
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 33.4 bits (75), Expect = 0.004
Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 20 PEFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYV 59
E+K L+V+G G GK++ + + + +P +
Sbjct: 2 TEYK-----LVVVGAGGVGKSALTIQLIQNHFVDEYDPTI 36
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 33.2 bits (74), Expect = 0.005
Identities = 10/39 (25%), Positives = 18/39 (46%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVIN 61
+SK + +LG GK+S +F + +P + N
Sbjct: 1 QSKSRKIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIEN 39
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 33.0 bits (74), Expect = 0.006
Identities = 11/28 (39%), Positives = 13/28 (46%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYL 50
KSKP + VLG GSGK +
Sbjct: 3 KSKPNVVFVLGGPGSGKGTQCANIVRDF 30
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 288
Score = 33.4 bits (76), Expect = 0.006
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLD 63
K PI + G +G+G ++ F + I D
Sbjct: 2 KKHPIISVT-GSSGAGTSTVKHTFDQIFRREGVKAVSIEGD 41
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId:
271]}
Length = 207
Score = 32.8 bits (74), Expect = 0.009
Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 20 PEFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDP 64
P K + + +V G+ GSGKT+ K + Y K P ++ D
Sbjct: 5 PVLKDRNLWFLV-GLQGSGKTTTAAKLALYYKGKGRRPLLVAADT 48
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 32.3 bits (72), Expect = 0.011
Identities = 8/45 (17%), Positives = 15/45 (33%)
Query: 28 CLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPYL 72
+ + G G GKT+ + K S L + + +
Sbjct: 3 HVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRI 47
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 32.3 bits (72), Expect = 0.012
Identities = 11/39 (28%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Query: 21 EFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYV 59
E+K L+VLG G GK++ +F ++ ++ +P +
Sbjct: 3 EYK-----LVVLGSGGVGKSALTVQFVQGIFVEKYDPTI 36
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 32.2 bits (72), Expect = 0.012
Identities = 10/39 (25%), Positives = 22/39 (56%), Gaps = 5/39 (12%)
Query: 21 EFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYV 59
E+K ++VLG G GK++ +F + + ++ +P +
Sbjct: 3 EYK-----VVVLGSGGVGKSALTVQFVTGTFIEKYDPTI 36
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 32.3 bits (72), Expect = 0.012
Identities = 9/60 (15%), Positives = 22/60 (36%), Gaps = 1/60 (1%)
Query: 22 FKSKPICLIVLGMAGSGKTSFVKKFSSYLYDK-QDNPYVINLDPACRDVPYLVNVDPACR 80
F + +I++G+ +GKT+ + +FS + + +L+
Sbjct: 11 FNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLMWDIGGQE 70
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 32.0 bits (71), Expect = 0.013
Identities = 8/61 (13%), Positives = 21/61 (34%)
Query: 24 SKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPYLVNVDPACRDVP 83
++ + +++LG+ G+GKT+ + + N++ D
Sbjct: 3 TREMRILILGLDGAGKTTILYRLQVGEVVTTIPTIGFNVETVTYKNLKFQVWDLGGLTSI 62
Query: 84 Y 84
Sbjct: 63 R 63
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 32.2 bits (72), Expect = 0.014
Identities = 17/62 (27%), Positives = 23/62 (37%), Gaps = 6/62 (9%)
Query: 2 AEEKVSDNSGPASSGDHGPEFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVIN 61
E +++DN G E P ++ G GSGKTS N VI+
Sbjct: 11 FENRLNDNLEELIQGKKAVE---SPTAFLLGGQPGSGKTSLRSAIFEETQ---GNVIVID 64
Query: 62 LD 63
D
Sbjct: 65 ND 66
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 31.8 bits (71), Expect = 0.016
Identities = 5/27 (18%), Positives = 13/27 (48%)
Query: 24 SKPICLIVLGMAGSGKTSFVKKFSSYL 50
+ P+ +++ G SGK + + +
Sbjct: 1 ADPLKVMISGAPASGKGTQCELIKTKY 27
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 31.9 bits (71), Expect = 0.018
Identities = 8/23 (34%), Positives = 15/23 (65%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFS 47
+ + L++LG SGK++ VK+
Sbjct: 1 REVKLLLLGAGESGKSTIVKQMK 23
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 31.5 bits (70), Expect = 0.020
Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 14 SSGDHGPEFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVIN 61
+ G K +V+G GKT + +++ + ++ P V +
Sbjct: 2 AHGPGALMLK-----CVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFD 44
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 31.6 bits (70), Expect = 0.020
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 22 FKSKPICLIVLGMAGSGKTSFVKKFS 47
K L+ LG+ +GKT+ +
Sbjct: 9 LYKKTGKLVFLGLDNAGKTTLLHMLK 34
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia
chrysanthemi [TaxId: 556]}
Length = 170
Score = 31.5 bits (70), Expect = 0.021
Identities = 7/27 (25%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Query: 24 SKPICLIVLGMAGSGKTSFVKKFSSYL 50
++PI ++ G G G T+ ++ + L
Sbjct: 2 TEPIFMV--GARGCGMTTVGRELARAL 26
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 31.4 bits (70), Expect = 0.023
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Query: 21 EFKSKPICLIVLGMAGSGKTSFVKKF 46
E K L++LG SGK++F+K+
Sbjct: 2 ELK-----LLLLGTGESGKSTFIKQM 22
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 31.1 bits (69), Expect = 0.026
Identities = 10/47 (21%), Positives = 19/47 (40%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPY 71
+ + + +LG G GK+S + +F +D NP +
Sbjct: 3 RELKVCLLGDTGVGKSSIMWRFVEDSFDPNINPTIGASFMTKTVQYQ 49
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 31.1 bits (69), Expect = 0.028
Identities = 13/42 (30%), Positives = 19/42 (45%), Gaps = 5/42 (11%)
Query: 20 PEFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVIN 61
PE + L VLG A SGK+S + +F + Y +
Sbjct: 4 PELR-----LGVLGDARSGKSSLIHRFLTGSYQVLEKTESEQ 40
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania
major [TaxId: 5664]}
Length = 174
Score = 31.1 bits (69), Expect = 0.030
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYL 50
+ K I +++ G G+GKTS + ++ L
Sbjct: 2 QPKGINILITGTPGTGKTSMAEMIAAEL 29
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III,
N-domain {Thermotoga maritima [TaxId: 2336]}
Length = 198
Score = 31.2 bits (70), Expect = 0.030
Identities = 9/44 (20%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDN-PYVINLDPA 65
KS+ I +++ G S + Y+ V+ +DP
Sbjct: 12 KSEGISILINGEDLSYPREVSLELPEYVEKFPPKASDVLEIDPE 55
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 31.2 bits (69), Expect = 0.030
Identities = 9/23 (39%), Positives = 18/23 (78%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFS 47
+ + L++LG+ +GKT+ +KKF+
Sbjct: 1 RELRLLMLGLDNAGKTTILKKFN 23
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId:
5076]}
Length = 208
Score = 30.9 bits (69), Expect = 0.032
Identities = 6/46 (13%), Positives = 16/46 (34%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRD 68
+ + + + G++ SGK++ + L + R
Sbjct: 21 NQRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRF 66
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 31.1 bits (69), Expect = 0.032
Identities = 8/39 (20%), Positives = 18/39 (46%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVIN 61
+ I +V+G GKT + +++ + + P V +
Sbjct: 2 SPQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFD 40
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 31.0 bits (69), Expect = 0.034
Identities = 8/40 (20%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Query: 20 PEFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYV 59
K ++++G +G GK+S + +F+ +D + +
Sbjct: 6 TTLK-----ILIIGESGVGKSSLLLRFTDDTFDPELAATI 40
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 31.0 bits (69), Expect = 0.034
Identities = 7/49 (14%), Positives = 17/49 (34%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPYLVNVDP 77
I++G G GK+ + +F+ + + + A +
Sbjct: 6 YIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKL 54
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 30.8 bits (68), Expect = 0.036
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 29 LIVL-GMAGSGKTSFVKKFSSYLYDKQDNPYVINLD 63
L ++ G AG GK++ K+ L + DN I D
Sbjct: 4 LYIITGPAGVGKSTTCKR----LAAQLDNSAYIEGD 35
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase
(APS kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 30.8 bits (68), Expect = 0.038
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLD 63
+ + + G++G+GKT+ YL Y ++ D
Sbjct: 18 RGCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGD 56
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 30.9 bits (69), Expect = 0.040
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDP 64
P ++V+G+ G+GKT+ K + D+ + + D
Sbjct: 8 PEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADT 49
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 30.9 bits (69), Expect = 0.041
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 29 LIVLGMAGSGKTSFVKKF 46
L++LG SGK++ VK+
Sbjct: 9 LLLLGAGESGKSTIVKQM 26
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 30.8 bits (68), Expect = 0.041
Identities = 9/46 (19%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
Query: 23 KSKPICLIVL-GMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACR 67
++ I L G SGK + + L + + L R
Sbjct: 2 RATQGFTIFLTGYMNSGKDAIARALQVTLNQQGGRSVSLLLGDTVR 47
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 30.6 bits (68), Expect = 0.042
Identities = 7/18 (38%), Positives = 14/18 (77%)
Query: 29 LIVLGMAGSGKTSFVKKF 46
+++LG SGK++F+K+
Sbjct: 5 ILLLGAGESGKSTFLKQM 22
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 30.7 bits (68), Expect = 0.042
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYV 59
+ I +V+G GKT + +++ + + P V
Sbjct: 2 QTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 36
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 30.7 bits (68), Expect = 0.043
Identities = 10/51 (19%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Query: 21 EFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPY 71
+++ + V G G GK+S V +F + + P V +
Sbjct: 2 DYR-----VAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDK 47
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 30.8 bits (68), Expect = 0.044
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPAC 66
++V+G + GKT+ + F+ + + P V A
Sbjct: 5 IVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTAS 42
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 30.8 bits (68), Expect = 0.044
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPAC 66
L + G AG GK++ V +F + + + +P + +
Sbjct: 5 LAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQ 42
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 30.4 bits (67), Expect = 0.045
Identities = 12/64 (18%), Positives = 21/64 (32%), Gaps = 5/64 (7%)
Query: 20 PEFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPYLVNVDPAC 79
+FK L++LG + GK+S V +F + + + V
Sbjct: 5 CQFK-----LVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 59
Query: 80 RDVP 83
D
Sbjct: 60 WDTA 63
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 30.4 bits (67), Expect = 0.047
Identities = 10/31 (32%), Positives = 21/31 (67%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYV 59
L+++G G+GKT+FVK+ + ++K+ +
Sbjct: 6 LVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 36
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 30.5 bits (68), Expect = 0.047
Identities = 10/42 (23%), Positives = 18/42 (42%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDP 64
+ K ++V+G+ G GKT+ + K Y + D
Sbjct: 3 EPKGRVVLVVGVNGVGKTTTIAKLGRYYQNLGKKVMFCAGDT 44
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 30.8 bits (68), Expect = 0.050
Identities = 8/64 (12%), Positives = 16/64 (25%), Gaps = 8/64 (12%)
Query: 19 GPEFKSKPICLIVL-GMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPYLVNVDP 77
GP + + G GK++FVK + + + +
Sbjct: 1 GPRR-------LSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQAAGNQKACTA 53
Query: 78 ACRD 81
Sbjct: 54 QSLG 57
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 30.5 bits (67), Expect = 0.051
Identities = 7/26 (26%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFSSYL 50
+ I L+ G G+GK++ ++ + L
Sbjct: 3 RNIFLV--GPMGAGKSTIGRQLAQQL 26
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 30.3 bits (67), Expect = 0.053
Identities = 7/35 (20%), Positives = 18/35 (51%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNP 57
+ + +++LG+ +GKT+ +K+ +S
Sbjct: 13 PDQEVRILLLGLDNAGKTTLLKQLASEDISHITPT 47
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 30.5 bits (68), Expect = 0.053
Identities = 8/41 (19%), Positives = 19/41 (46%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLD 63
P ++++G+ G+GK + K + + K ++ D
Sbjct: 9 DKIPYVIMLVGVQGTGKATTAGKLAYFYKKKGFKVGLVGAD 49
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 30.5 bits (67), Expect = 0.055
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 28 CLIVLGMAGSGKTSFVKKFSSYL 50
+VLG+ +GK+S +K + L
Sbjct: 31 ITLVLGLRRTGKSSIIKIGINEL 53
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 30.4 bits (67), Expect = 0.055
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYV 59
L++LG A GK+S V +F S + + P +
Sbjct: 6 LVLLGEAAVGKSSIVLRFVSNDFAENKEPTI 36
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter
jejuni [TaxId: 197]}
Length = 161
Score = 30.3 bits (67), Expect = 0.057
Identities = 9/26 (34%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFSSYL 50
K I I G GSGK++ + + L
Sbjct: 1 KNIVFI--GFMGSGKSTLARALAKDL 24
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 30.2 bits (67), Expect = 0.059
Identities = 6/32 (18%), Positives = 15/32 (46%)
Query: 19 GPEFKSKPICLIVLGMAGSGKTSFVKKFSSYL 50
P ++ +G G+GK++F+++
Sbjct: 7 SSLLSPNPEVVVAVGFPGAGKSTFIQEHLVSA 38
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 30.2 bits (67), Expect = 0.061
Identities = 8/29 (27%), Positives = 18/29 (62%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNP 57
L+ LG +G GKT+F+ +++ ++ +
Sbjct: 8 LLALGDSGVGKTTFLYRYTDNKFNPKFIT 36
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top
tamarin (Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 29.9 bits (66), Expect = 0.064
Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 5/39 (12%)
Query: 20 PEFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPY 58
K +I++G G GK++ +F + + P
Sbjct: 3 ALHK-----VIMVGSGGVGKSALTLQFMYDEFVEDYEPT 36
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 30.5 bits (67), Expect = 0.064
Identities = 11/45 (24%), Positives = 17/45 (37%)
Query: 24 SKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRD 68
+LG G+GKT ++K DK +V R+
Sbjct: 41 HHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRN 85
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 30.0 bits (66), Expect = 0.065
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYV 59
L+++G GKT + S + + P V
Sbjct: 5 LVIVGDGACGKTCLLIVNSKDQFPEVYVPTV 35
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 29.9 bits (66), Expect = 0.067
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 26 PICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDP 64
P+ +G+GKT+ +KK L + P +I
Sbjct: 3 PLLAFA-AWSGTGKTTLLKKLIPALCARGIRPGLIKHTH 40
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 30.4 bits (67), Expect = 0.067
Identities = 7/26 (26%), Positives = 11/26 (42%), Gaps = 1/26 (3%)
Query: 29 LIVL-GMAGSGKTSFVKKFSSYLYDK 53
I + G +GK++FV D
Sbjct: 4 KISIEGNIAAGKSTFVNILKQLCEDW 29
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 29.9 bits (66), Expect = 0.069
Identities = 7/24 (29%), Positives = 17/24 (70%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKF 46
+K + +++LG+ G+GKT+ + +
Sbjct: 14 SNKELRILILGLDGAGKTTILYRL 37
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 30.0 bits (67), Expect = 0.072
Identities = 8/42 (19%), Positives = 19/42 (45%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDP 64
P ++++G+ G GKT+ + K + + + + D
Sbjct: 6 GKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDT 47
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 29.9 bits (66), Expect = 0.077
Identities = 9/38 (23%), Positives = 15/38 (39%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPAC 66
L+ LG GKTS + +F +D + +
Sbjct: 3 LVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSK 40
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 29.6 bits (65), Expect = 0.082
Identities = 6/39 (15%), Positives = 19/39 (48%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACR 67
+++G++GSGK++ + + L+ + ++
Sbjct: 9 YVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIE 47
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 29.8 bits (66), Expect = 0.084
Identities = 6/32 (18%), Positives = 15/32 (46%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVI 60
++++G +G GKT + +F + +
Sbjct: 9 VMLVGDSGVGKTCLLVRFKDGAFLAGTFISTV 40
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 184
Score = 29.7 bits (65), Expect = 0.085
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYV 59
+I+LG +G GKTS + ++ + + Q +
Sbjct: 5 VIILGDSGVGKTSLMNQYVNKKFSNQYKATI 35
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 30.0 bits (66), Expect = 0.087
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 30 IVLGMAGSGKTSFVKKFSSYLYDKQDNPYVIN 61
IV G+ G GK++ + K L ++ N +IN
Sbjct: 5 IVTGIPGVGKSTVLAKVKEILDNQGINNKIIN 36
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 29.7 bits (65), Expect = 0.091
Identities = 7/30 (23%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPY 58
++++G G GK++ F + ++D D+
Sbjct: 6 VVLIGEQGVGKSTLANIF-AGVHDSMDSDC 34
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 29.8 bits (66), Expect = 0.094
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNP 57
++++G AG GKT V++F+ L+
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQGLFPPGQGA 36
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 29.6 bits (65), Expect = 0.094
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPY 58
+IV+G + GKT +F + + +
Sbjct: 5 IIVIGDSNVGKTCLTYRFCAGRFPDRTEAT 34
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 29.5 bits (65), Expect = 0.096
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPY 58
+++LG GKTS V ++ ++ +
Sbjct: 6 VVLLGEGCVGKTSLVLRYCENKFNDKHITT 35
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 29.6 bits (65), Expect = 0.10
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYV 59
L+V+G G GK++ +F + +P +
Sbjct: 8 LVVVGGGGVGKSALTIQFIQSYFVTDYDPTI 38
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 29.3 bits (64), Expect = 0.10
Identities = 10/41 (24%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDV 69
++ +G GSGK+++ ++ K Y IN D + +
Sbjct: 5 ILTIGCPGSGKSTWARE----FIAKNPGFYNINRDDYRQSI 41
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 29.6 bits (65), Expect = 0.10
Identities = 8/23 (34%), Positives = 14/23 (60%)
Query: 24 SKPICLIVLGMAGSGKTSFVKKF 46
S+ L+V+G G GK++ +F
Sbjct: 4 SETHKLVVVGGGGVGKSALTIQF 26
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 30.0 bits (67), Expect = 0.10
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)
Query: 27 ICLIVL-GMAGSGKTSFVKKFSSYLYDKQDNPYV 59
I I L G+ G GK++ + +S Y
Sbjct: 6 IVRIYLDGVYGIGKSTTGRVMASAASGGSPTLYF 39
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 29.3 bits (64), Expect = 0.10
Identities = 6/43 (13%), Positives = 18/43 (41%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPY 71
++V+G GK+S ++++ ++ K + +
Sbjct: 5 MVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVN 47
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 29.5 bits (65), Expect = 0.11
Identities = 8/30 (26%), Positives = 15/30 (50%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPY 58
+V+G AG+GK+ + +F + N
Sbjct: 8 FLVIGNAGTGKSCLLHQFIEKKFKDDSNHT 37
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 29.4 bits (65), Expect = 0.11
Identities = 5/31 (16%), Positives = 16/31 (51%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYV 59
++++G +G GK+ + +F ++ +
Sbjct: 5 ILLIGDSGVGKSCLLVRFVEDKFNPSFITTI 35
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 29.4 bits (65), Expect = 0.11
Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 7/54 (12%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPYLVNVDPACRDV 82
L+++G +G GK+ + +FS D+ Y + + V+ + V
Sbjct: 9 LLLIGNSGVGKSCLLLRFS-------DDTYTNDYISTIGVDFKIKTVELDGKTV 55
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 29.5 bits (65), Expect = 0.11
Identities = 12/51 (23%), Positives = 19/51 (37%), Gaps = 5/51 (9%)
Query: 26 PICLIVLGMAGSGKTSFVKKFSSYL-----YDKQDNPYVINLDPACRDVPY 71
P + V G SGK+S K L +Q +++ D R +
Sbjct: 2 PFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFYRVLTS 52
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 29.2 bits (64), Expect = 0.12
Identities = 5/20 (25%), Positives = 13/20 (65%)
Query: 29 LIVLGMAGSGKTSFVKKFSS 48
++++G+ +GKT+ + K
Sbjct: 3 ILMVGLDAAGKTTILYKLKL 22
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 29.7 bits (65), Expect = 0.12
Identities = 7/35 (20%), Positives = 12/35 (34%)
Query: 18 HGPEFKSKPICLIVLGMAGSGKTSFVKKFSSYLYD 52
G + +G G GKT+ K + +
Sbjct: 38 SGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVSE 72
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 29.3 bits (64), Expect = 0.13
Identities = 10/59 (16%), Positives = 24/59 (40%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPYLVNVDPACRD 81
+ + L + G++ SGKT+ + S L ++ + V ++D + +
Sbjct: 19 TAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEEWF 77
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 29.3 bits (64), Expect = 0.13
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 29 LIVLGMAGSGKTSFVKKFSS 48
L+ LG+ +GKT+ + +
Sbjct: 3 LLFLGLDNAGKTTLLHMLKN 22
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 29.3 bits (64), Expect = 0.14
Identities = 7/43 (16%), Positives = 15/43 (34%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPY 71
+++LG G GK++ + F + D +
Sbjct: 4 VLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRSIVVDGE 46
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 29.2 bits (64), Expect = 0.14
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQ 54
+I+LG G GK+S + ++ + +D Q
Sbjct: 9 VILLGDGGVGKSSLMNRYVTNKFDTQ 34
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 29.1 bits (64), Expect = 0.14
Identities = 5/30 (16%), Positives = 18/30 (60%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPY 58
++++G +G GK++ + +F+ ++ +
Sbjct: 7 VVLIGDSGVGKSNLLSRFTRNEFNLESKST 36
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 29.1 bits (64), Expect = 0.15
Identities = 6/30 (20%), Positives = 13/30 (43%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPY 58
I++G G GK+ + +F+ +
Sbjct: 7 YIIIGDMGVGKSCLLHQFTEKKFMADCPHT 36
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 28.9 bits (63), Expect = 0.15
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFSS 48
+ + L ++G+ SGKT+FV +S
Sbjct: 1 EEMELTLVGLQYSGKTTFVNVIAS 24
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 29.2 bits (65), Expect = 0.17
Identities = 15/116 (12%), Positives = 32/116 (27%), Gaps = 5/116 (4%)
Query: 30 IVL-GMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPYLVNVDPACRDVPYLVNV 88
I L G G GKT+ ++F + + +I + +
Sbjct: 8 IYLDGAYGIGKTTAAEEFLHHFAITPNRILLIGEPLSYWRNLAGEDAICGIYGTQTRRLN 67
Query: 89 GELSMLLLNGNKLEHQILNFQKLATWMAFGFAFMRSSCVQANFIKMGPNPTLPPLV 144
G++S Q + A A + + + + N ++
Sbjct: 68 GDVSPEDAQRLTAHFQS----LFCSPHAIMHAKISALMDTSTSDLVQVNKEPYKIM 119
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 29.1 bits (64), Expect = 0.19
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDP 64
+ L V G G+GK++F++ F L + VI +DP
Sbjct: 53 NTLRLGVTGTPGAGKSTFLEAFGMLLIREGLKVAVIAVDP 92
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 28.9 bits (63), Expect = 0.19
Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 29 LIVL-GMAGSGKTSFVKKFSSYLYDKQDNPYVI 60
LI + G+ G+GK + V+K S + +
Sbjct: 2 LIAIEGVDGAGKRTLVEKLSGAFRAAGRSVATL 34
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 28.6 bits (63), Expect = 0.21
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 29 LIVLGMAGSGKTSFVKKF 46
L+++G +G GKT + +F
Sbjct: 9 LLLIGDSGVGKTCVLFRF 26
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 28.5 bits (62), Expect = 0.21
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNP 57
+I+LG +G GKTS + ++ + Y +Q
Sbjct: 5 VIILGDSGVGKTSLMHRYVNDKYSQQYKA 33
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli
[TaxId: 562]}
Length = 210
Score = 28.7 bits (63), Expect = 0.23
Identities = 10/37 (27%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 29 LIVL-GMAGSGKTSFVKKFSSYLYDKQDNPYVINLDP 64
IV+ G+ G+GKT+ L V +P
Sbjct: 4 YIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREP 40
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 28.3 bits (62), Expect = 0.26
Identities = 6/18 (33%), Positives = 14/18 (77%)
Query: 29 LIVLGMAGSGKTSFVKKF 46
++++G + GKTSF+ ++
Sbjct: 8 ILIIGNSSVGKTSFLFRY 25
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB
{Methylobacterium extorquens [TaxId: 408]}
Length = 323
Score = 28.7 bits (63), Expect = 0.28
Identities = 10/40 (25%), Positives = 19/40 (47%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDP 64
+ I + + G+ G GK++ + S L V+ +DP
Sbjct: 50 RAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVDP 89
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 28.4 bits (63), Expect = 0.31
Identities = 5/30 (16%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 25 KPICLIVL-GMAGSGKTSFVKKFSSYLYDK 53
+ + + G G GKT+ + +
Sbjct: 2 PTLLRVYIDGPHGMGKTTTTQLLVALGSRD 31
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 28.0 bits (61), Expect = 0.31
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYL 50
+++ G G GKT+ K+ +S
Sbjct: 7 ILLTGTPGVGKTTLGKELASKS 28
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus
stearothermophilus, PcrA [TaxId: 1422]}
Length = 318
Score = 28.4 bits (62), Expect = 0.34
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 29 LIVLGMAGSGKTS-FVKKFSSYLYDKQDNPYVI 60
L+++ AGSGKT + + + +K P+ I
Sbjct: 27 LLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNI 59
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 28.0 bits (61), Expect = 0.35
Identities = 6/22 (27%), Positives = 15/22 (68%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYL 50
+++G+ GSGK++ ++ + L
Sbjct: 4 AVLVGLPGSGKSTIGRRLAKAL 25
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein
TrwB {Escherichia coli [TaxId: 562]}
Length = 433
Score = 28.4 bits (62), Expect = 0.39
Identities = 9/36 (25%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDP 64
L+V G G+GK+ +++ + + D ++ +DP
Sbjct: 53 LLVNGATGTGKSVLLRELAYTGLLRGDR--MVIVDP 86
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 27.9 bits (61), Expect = 0.41
Identities = 5/27 (18%), Positives = 14/27 (51%)
Query: 24 SKPICLIVLGMAGSGKTSFVKKFSSYL 50
++ + ++G GSGK + + + +
Sbjct: 4 ARLLRAAIMGAPGSGKGTVSSRITKHF 30
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 27.6 bits (60), Expect = 0.44
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 24 SKPICLIVLGMAGSGKTSFVKKFSSYL 50
K + V+G GSGK + +K
Sbjct: 6 KKSKIIFVVGGPGSGKGTQCEKIVQKY 32
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 27.8 bits (61), Expect = 0.45
Identities = 15/97 (15%), Positives = 29/97 (29%), Gaps = 11/97 (11%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYV--INLDPACRDVPYL-------V 73
+ P + + G GK++ + + L ++ V I D L
Sbjct: 77 QRIPYIISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKK 136
Query: 74 NVDPACRDVPYLVNVGELSMLLLNGNKLEHQILNFQK 110
P D+ LV +S L + + +
Sbjct: 137 KGFPESYDMHRLVKF--VSDLKSGVPNVTAPVYSHLI 171
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 27.6 bits (60), Expect = 0.46
Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 29 LIVL-GMAGSGKTSFVKKFSSYLYDK 53
LI++ G+ +GKT+ L
Sbjct: 5 LILIEGLDRTGKTTQCNILYKKLQPN 30
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 27.7 bits (60), Expect = 0.49
Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 21 EFKSKPICLIVLGMAGSGKTSFVKKFSSYL 50
F +K + ++ G SGK+ V K ++
Sbjct: 4 PFFAKTVAIL--GGESSGKSVLVNKLAAVF 31
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 27.7 bits (60), Expect = 0.56
Identities = 5/19 (26%), Positives = 10/19 (52%)
Query: 30 IVLGMAGSGKTSFVKKFSS 48
+ +G+ SGKT + +
Sbjct: 4 LFVGLCDSGKTLLFVRLLT 22
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 27.3 bits (59), Expect = 0.61
Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 29 LIVL-GMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRD 68
+I+L G + +GK+ V+ S L + V +L A
Sbjct: 5 MIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPL 45
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 27.2 bits (59), Expect = 0.61
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 5/32 (15%)
Query: 29 LIVL-GMAGSGKTSFVKKFSSYLYDKQDNPYV 59
+++L G GSGK++ + L + P V
Sbjct: 6 ILLLSGHPGSGKSTIAEA----LANLPGVPKV 33
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 27.1 bits (59), Expect = 0.63
Identities = 7/36 (19%), Positives = 15/36 (41%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDP 64
V+G SGKT+ ++K+ + + +
Sbjct: 4 WQVVGYKHSGKTTLMEKWVAAAVREGWRVGTVKHHG 39
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 27.2 bits (59), Expect = 0.69
Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 24 SKPICLIVLGMAGSGKTSFVKKFSSYLYDK 53
S+PI ++ G +G+GK++ +KK + D
Sbjct: 1 SRPI--VISGPSGTGKSTLLKKLFAEYPDS 28
>d1kcxa1 b.92.1.3 (A:15-66,A:401-490) Dihydropyrimidinase related
protein-1 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 142
Score = 26.8 bits (59), Expect = 0.75
Identities = 11/51 (21%), Positives = 17/51 (33%), Gaps = 15/51 (29%)
Query: 18 HGPEFKSKPICLIV-----------LGMAGSGKTSFV--KKFSSYLYDKQD 55
G E P+ +I G G+ F+ K F +LY +
Sbjct: 87 EGMECHGSPLVVISQGKIVFEDGNISVSKGMGR--FIPRKPFPEHLYQRVR 135
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 27.2 bits (59), Expect = 0.76
Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 29 LIVL-GMAGSGKTSFVKKFSSYLYDK 53
LIVL G+ +GK++ +K L
Sbjct: 5 LIVLEGVDRAGKSTQSRKLVEALCAA 30
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Length = 364
Score = 27.1 bits (59), Expect = 0.77
Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 5/75 (6%)
Query: 26 PICLIVLGMAGSGKTSFVKKFSSYLYD---KQDNPYVINLDPACRDVPYLVNVDPACRDV 82
++++G GSGKT + + +L D + DV ++
Sbjct: 68 KSNILLIGPTGSGKTLMAQTLAKHLDIPIAISDATSLTEAGYVGEDVENILTRLLQAS-- 125
Query: 83 PYLVNVGELSMLLLN 97
+ V + ++ ++
Sbjct: 126 DWNVQKAQKGIVFID 140
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 194
Score = 26.9 bits (58), Expect = 0.79
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 26 PICLIVLGMAGSGKTSFVKKFSSYL 50
P+ + VLG G+GK + +
Sbjct: 1 PLVVFVLGGPGAGKGTQCARIVEKY 25
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 26.8 bits (58), Expect = 0.80
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFSSYL 50
K + ++LG G+GK + K +
Sbjct: 2 KGVRAVLLGPPGAGKGTQAPKLAKNF 27
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 26.9 bits (58), Expect = 0.82
Identities = 9/32 (28%), Positives = 14/32 (43%), Gaps = 1/32 (3%)
Query: 20 PEF-KSKPICLIVLGMAGSGKTSFVKKFSSYL 50
P F + + VLG G+GK + +K
Sbjct: 1 PAFSPDQVSVIFVLGGPGAGKGTQCEKLVKDY 32
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken
(Gallus gallus), Va isoform [TaxId: 9031]}
Length = 730
Score = 27.4 bits (60), Expect = 0.86
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYL 50
+ +IV G +G+GKT K Y
Sbjct: 91 DERNQSIIVSGESGAGKTVSAKYAMRYF 118
>g1qhh.1 c.37.1.19 (A:,B:,C:,D:) DEXX box DNA helicase {Bacillus
stearothermophilus, PcrA [TaxId: 1422]}
Length = 623
Score = 27.2 bits (59), Expect = 0.89
Identities = 10/33 (30%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 29 LIVLGMAGSGKTS-FVKKFSSYLYDKQDNPYVI 60
L+++ AGSGKT + + + +K P+ I
Sbjct: 27 LLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNI 59
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 794
Score = 27.0 bits (59), Expect = 1.0
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 28 CLIVLGMAGSGKTSFVKKFSSYL 50
+++ G +G+GKT K+ Y
Sbjct: 125 SILITGESGAGKTVNTKRVIQYF 147
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 26.4 bits (57), Expect = 1.1
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLD 63
PI + + G GSGK++ S+ Y V++LD
Sbjct: 2 HPIIIGITGNIGSGKSTVAALLRSWGY------PVLDLD 34
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 26.3 bits (57), Expect = 1.2
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 6/39 (15%)
Query: 31 VLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDV 69
+ G GSGK++ F+ VI+ D R V
Sbjct: 8 LTGGIGSGKSTVANAFADLGI------NVIDADIIARQV 40
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia
coli, RepD [TaxId: 562]}
Length = 306
Score = 26.6 bits (57), Expect = 1.3
Identities = 8/13 (61%), Positives = 9/13 (69%)
Query: 29 LIVLGMAGSGKTS 41
+VL AGSGKT
Sbjct: 17 CLVLAGAGSGKTR 29
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain
{Caenorhabditis elegans [TaxId: 6239]}
Length = 277
Score = 26.3 bits (57), Expect = 1.4
Identities = 8/27 (29%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 21 EFKSKPICLIVL-GMAGSGKTSFVKKF 46
E + L G AGSGK+ +
Sbjct: 38 EMCDLDSFFLFLHGRAGSGKSVIASQA 64
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 26.1 bits (56), Expect = 1.4
Identities = 8/24 (33%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFSS 48
+P +I G SGKTS + ++
Sbjct: 3 QPSIIIA-GPQNSGKTSLLTLLTT 25
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
{Dictyostelium discoideum [TaxId: 44689]}
Length = 712
Score = 26.6 bits (58), Expect = 1.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 28 CLIVLGMAGSGKTSFVKKFSSYL 50
L++ G +G+GKT KK YL
Sbjct: 127 SLLITGESGAGKTENTKKVIQYL 149
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
scallop (Aequipecten irradians) [TaxId: 31199]}
Length = 789
Score = 26.6 bits (58), Expect = 1.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 28 CLIVLGMAGSGKTSFVKKFSSYL 50
++ G +G+GKT KK YL
Sbjct: 123 SCLITGESGAGKTENTKKVIMYL 145
>d2gp4a2 d.334.1.1 (A:1-418) 6-phosphogluconate dehydratase EDD
{Shewanella oneidensis [TaxId: 70863]}
Length = 418
Score = 26.2 bits (57), Expect = 1.7
Identities = 8/45 (17%), Positives = 12/45 (26%)
Query: 34 MAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPYLVNVDPA 78
+A G T+ + + VP L V P
Sbjct: 295 LATGGSTNLTMHIVAAARAAGIIVNWDDFSELSDAVPLLARVYPN 339
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 25.7 bits (55), Expect = 1.9
Identities = 7/21 (33%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
Query: 25 KPICLIVLGMAGSGKTSFVKK 45
+P+ ++ G +G+GK++ +KK
Sbjct: 1 RPV--VLSGPSGAGKSTLLKK 19
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 26.2 bits (57), Expect = 2.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 28 CLIVLGMAGSGKTSFVKKFSSYL 50
C+I+ G +G+GKT KK +L
Sbjct: 88 CVIISGESGAGKTEASKKIMQFL 110
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 25.6 bits (55), Expect = 2.2
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYL 50
+++LG G+GK + K + L
Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKL 24
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 25.7 bits (55), Expect = 2.3
Identities = 4/22 (18%), Positives = 10/22 (45%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYL 50
++++G G+GK +
Sbjct: 5 MVLIGPPGAGKGTQAPNLQERF 26
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 25.6 bits (55), Expect = 2.4
Identities = 5/22 (22%), Positives = 9/22 (40%), Gaps = 2/22 (9%)
Query: 24 SKPICLIVLGMAGSGKTSFVKK 45
K + ++LG G G+
Sbjct: 3 RKTL--VLLGAHGVGRRHIKNT 22
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
(Gallus gallus), pectoral muscle [TaxId: 9031]}
Length = 710
Score = 25.9 bits (56), Expect = 2.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 28 CLIVLGMAGSGKTSFVKKFSSYL 50
++ G +G+GKT KK YL
Sbjct: 93 SILCTGESGAGKTENTKKVIQYL 115
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 25.5 bits (54), Expect = 2.8
Identities = 15/148 (10%), Positives = 34/148 (22%), Gaps = 6/148 (4%)
Query: 5 KVSDNSGPASSGDHGPEFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDP 64
+NS S G + ++ G G GKT+ + L ++
Sbjct: 31 ANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRS 90
Query: 65 ACRDVPYLVN------VDPACRDVPYLVNVGELSMLLLNGNKLEHQILNFQKLATWMAFG 118
+ N V + N+ +++ + + F
Sbjct: 91 KTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHFVIIMDEVDGMSGGDRGGVGQLAQFC 150
Query: 119 FAFMRSSCVQANFIKMGPNPTLPPLVQV 146
+ N + +
Sbjct: 151 RKTSTPLILICNERNLPKMRPFDRVCLD 178
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus
influenzae [TaxId: 727]}
Length = 205
Score = 25.2 bits (54), Expect = 3.0
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 6/39 (15%)
Query: 31 VLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDV 69
+ G GSGKT+ F+ +++ D R+V
Sbjct: 7 LTGGIGSGKTTIANLFTDLGV------PLVDADVVAREV 39
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 25.5 bits (55), Expect = 3.0
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 20 PEFKSKPICLIVLGMAGSGKTSFV 43
+ + ++V+G G GK+S V
Sbjct: 26 KQEDVNSLTILVMGKGGVGKSSTV 49
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 25.1 bits (54), Expect = 3.7
Identities = 9/44 (20%), Positives = 19/44 (43%), Gaps = 3/44 (6%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYL---YDKQDNPYVINLD 63
P+ + G GSGK+ + ++L Y + + ++D
Sbjct: 24 NKCPLFIFFSGPQGSGKSFTSIQIYNHLMEKYGGEKSIGYASID 67
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 25.1 bits (54), Expect = 3.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 21 EFKSKPICLIVLGMAGSGKTSFV 43
E S + + V G GSGK+SF+
Sbjct: 51 EIDSSVLNVAVTGETGSGKSSFI 73
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 24.8 bits (53), Expect = 3.8
Identities = 4/22 (18%), Positives = 12/22 (54%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYL 50
++++G+ G+GK + +
Sbjct: 3 IVLMGLPGAGKGTQADRIVEKY 24
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 25.0 bits (54), Expect = 3.8
Identities = 6/28 (21%), Positives = 8/28 (28%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYL 50
K + G SGKT+
Sbjct: 151 IPKKRYWLFKGPIDSGKTTLAAALLELC 178
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 25.1 bits (53), Expect = 3.9
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 21 EFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDK 53
EFK +I G GSGK+S + LY
Sbjct: 20 EFKEGINLII--GQNGSGKSSLLDAILVGLYWP 50
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 24.9 bits (53), Expect = 4.0
Identities = 6/22 (27%), Positives = 14/22 (63%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYL 50
L+++G+ G+GK + +K +
Sbjct: 3 LVLMGLPGAGKGTQAEKIVAAY 24
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 24.8 bits (53), Expect = 4.3
Identities = 20/119 (16%), Positives = 34/119 (28%), Gaps = 17/119 (14%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPYLVNVDPACRDVPYLVNV 88
IV +G+GK+S ++ ++ P D V P V
Sbjct: 5 YIVSAPSGAGKSSLIQA-------------LLKTQPL-YDTQVSV---SHTTRQPRPGEV 47
Query: 89 GELSMLLLNGNKLEHQILNFQKLATWMAFGFAFMRSSCVQANFIKMGPNPTLPPLVQVI 147
+N ++ + I L FG + S + G + L Q
Sbjct: 48 HGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLDIDWQGA 106
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 24.9 bits (53), Expect = 4.6
Identities = 6/20 (30%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
Query: 26 PICLIVLGMAGSGKTSFVKK 45
+ L+ G G+GKT+ ++
Sbjct: 4 AVTLLT-GFLGAGKTTLLRH 22
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 309
Score = 24.8 bits (53), Expect = 4.6
Identities = 6/46 (13%), Positives = 13/46 (28%)
Query: 26 PICLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDVPY 71
P ++++G G GKT ++ +
Sbjct: 49 PKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKE 94
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 24.6 bits (53), Expect = 4.8
Identities = 6/36 (16%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Query: 23 KSKPICLIVL-GMAGSGKTSFVKKFSSYLYDKQDNP 57
++ ++ L G G+GKT+ + + + +
Sbjct: 29 HTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQGNVK 64
>d3eeqa2 c.152.1.1 (A:8-214) Cobalamin biosynthesis protein G,
CbiG {Sulfolobus solfataricus [TaxId: 2287]}
Length = 207
Score = 24.5 bits (53), Expect = 5.5
Identities = 5/42 (11%), Positives = 14/42 (33%), Gaps = 4/42 (9%)
Query: 28 CLIVLGMAGSGKTSFVKKFSSYLYDKQDNPYVINLDPACRDV 69
++ + + Y K ++P ++ +D V
Sbjct: 56 AIVFVMALEG----ATRIVCKYAKSKTEDPAIVCIDDKINYV 93
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 24.1 bits (51), Expect = 6.7
Identities = 5/22 (22%), Positives = 10/22 (45%)
Query: 29 LIVLGMAGSGKTSFVKKFSSYL 50
+I+LG +GK + +
Sbjct: 3 IILLGAPVAGKGTQAQFIMEKY 24
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain
{Human papillomavirus type 18 [TaxId: 333761]}
Length = 205
Score = 24.0 bits (52), Expect = 7.0
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 23 KSKPICLIVLGMAGSGKTSFVKKFSSYLYDK 53
K CL+ G A +GK+ F F ++
Sbjct: 50 TPKKNCLVFCGPANTGKSYFGMSFIHFIQGA 80
>d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo
sapiens) [TaxId: 9606]}
Length = 361
Score = 24.4 bits (53), Expect = 7.1
Identities = 9/38 (23%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 1 MAEEKVSDNSG-PASSGDHGPEFKSKPICLIVLGMAGS 37
M E+K+ S D + C I LG +
Sbjct: 61 MIEKKLEPLSQDEDQHADLTQSRRPLTSCTIFLGYTSN 98
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 24.4 bits (51), Expect = 7.1
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 21 EFKSKPICLIVLGMAGSGKTSFVKKFSSYLYDK 53
EFK +I G GSGK+S + LY
Sbjct: 20 EFKEGINLII--GQNGSGKSSLLDAILVGLYWP 50
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae
[TaxId: 1313]}
Length = 223
Score = 24.2 bits (51), Expect = 7.2
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 25 KPICLIVLGMAGSGKTSFVKKFSSYL 50
K I + + G A SGK++ K +
Sbjct: 2 KTIQIAIDGPASSGKSTVAKIIAKDF 27
>d1kq1a_ b.38.1.2 (A:) Pleiotropic translational regulator Hfq
{Staphylococcus aureus [TaxId: 1280]}
Length = 60
Score = 22.6 bits (49), Expect = 8.4
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 90 ELSMLLLNGNKLEHQILNFQK 110
E+++ LNG +++ I + K
Sbjct: 16 EVTVFFLNGFQMKGVIEEYDK 36
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.138 0.421
Gapped
Lambda K H
0.267 0.0443 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 539,468
Number of extensions: 22712
Number of successful extensions: 246
Number of sequences better than 10.0: 1
Number of HSP's gapped: 245
Number of HSP's successfully gapped: 160
Length of query: 147
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 70
Effective length of database: 1,350,386
Effective search space: 94527020
Effective search space used: 94527020
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.4 bits)