BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy11495
         (81 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P42346|MTOR_RAT Serine/threonine-protein kinase mTOR OS=Rattus norvegicus GN=Mtor
           PE=1 SV=1
          Length = 2549

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 42/53 (79%)

Query: 13  YRLCFEEAMSGLDEVFSREKGVNREDRIHGSLLVLNELLRVSNVTWERTYEDL 65
           YR  FEEA  G DE  ++EKG+NR+DRIHG+LL+LNEL+R+S++  ER  E++
Sbjct: 234 YRHTFEEAEKGFDETLAKEKGMNRDDRIHGALLILNELVRISSMEGERLREEM 286


>sp|P42345|MTOR_HUMAN Serine/threonine-protein kinase mTOR OS=Homo sapiens GN=MTOR PE=1
           SV=1
          Length = 2549

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 42/53 (79%)

Query: 13  YRLCFEEAMSGLDEVFSREKGVNREDRIHGSLLVLNELLRVSNVTWERTYEDL 65
           YR  FEEA  G DE  ++EKG+NR+DRIHG+LL+LNEL+R+S++  ER  E++
Sbjct: 234 YRHTFEEAEKGFDETLAKEKGMNRDDRIHGALLILNELVRISSMEGERLREEM 286


>sp|Q9JLN9|MTOR_MOUSE Serine/threonine-protein kinase mTOR OS=Mus musculus GN=Mtor PE=1
           SV=2
          Length = 2549

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/53 (56%), Positives = 42/53 (79%)

Query: 13  YRLCFEEAMSGLDEVFSREKGVNREDRIHGSLLVLNELLRVSNVTWERTYEDL 65
           YR  FEEA  G DE  ++EKG+NR+DRIHG+LL+LNEL+R+S++  ER  E++
Sbjct: 234 YRHTFEEAEKGFDETLAKEKGMNRDDRIHGALLILNELVRISSMEGERLREEM 286


>sp|Q9VK45|TOR_DROME Target of rapamycin OS=Drosophila melanogaster GN=Tor PE=1 SV=1
          Length = 2470

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 3/64 (4%)

Query: 5   REKSAYATYRLCFEEAMSGLDEVFSR---EKGVNREDRIHGSLLVLNELLRVSNVTWERT 61
           ++ S    YR+C++EA    +        +KGV R+DRIHG L+V NEL R +N TWER 
Sbjct: 214 KQSSEPQWYRICYDEANGSFNADLGSSKDQKGVTRDDRIHGGLVVFNELFRCANATWERR 273

Query: 62  YEDL 65
           Y  L
Sbjct: 274 YTSL 277


>sp|Q95Q95|TOR_CAEEL Target of rapamycin homolog OS=Caenorhabditis elegans GN=let-363
           PE=2 SV=3
          Length = 2697

 Score = 33.5 bits (75), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 4/47 (8%)

Query: 13  YRLCFEEAMSGLDEVFSREKGVNREDRIHGSLLVLNELLRVSNVTWE 59
           ++ CF+EA+ G      ++      DR H   L+LNELLR+S+  +E
Sbjct: 282 FKKCFDEALEGQPNPSQKDD----LDRWHAVALILNELLRISDQRFE 324


>sp|Q9X839|CYC2_STRCO Germacradienol/geosmin synthase OS=Streptomyces coelicolor (strain
           ATCC BAA-471 / A3(2) / M145) GN=cyc2 PE=1 SV=3
          Length = 726

 Score = 30.4 bits (67), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 24  LDEVFSREKGVNREDRIHGSLLVLNELLRVSNVTWERTYEDLMNR 68
           L++VFS +K +  E  IH ++LV+     V         +DLMN+
Sbjct: 597 LNDVFSYQKEIEYEGEIHNAVLVVQNFFGVDYPAALGVVQDLMNQ 641


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.132    0.377 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,983,631
Number of Sequences: 539616
Number of extensions: 843463
Number of successful extensions: 2036
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2031
Number of HSP's gapped (non-prelim): 8
length of query: 81
length of database: 191,569,459
effective HSP length: 52
effective length of query: 29
effective length of database: 163,509,427
effective search space: 4741773383
effective search space used: 4741773383
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)