Query psy11495
Match_columns 81
No_of_seqs 49 out of 51
Neff 3.4
Searched_HMMs 13730
Date Fri Aug 16 19:52:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11495.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11495hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1u6za3 c.55.1.8 (A:136-312) E 29.0 24 0.0018 21.1 3.2 27 30-56 124-152 (177)
2 d1t6ca2 c.55.1.8 (A:133-312) E 28.7 34 0.0025 21.1 3.9 26 31-56 128-155 (180)
3 d1ufia_ a.30.4.1 (A:) Dimerisa 24.0 38 0.0028 18.3 3.0 32 17-48 7-38 (48)
4 d2fgea2 d.185.1.1 (A:798-993) 23.7 11 0.00077 23.2 0.6 21 33-53 23-43 (196)
5 d1g8qa_ a.135.1.1 (A:) CD81 ex 22.5 63 0.0046 18.8 4.1 36 11-57 13-48 (90)
6 d1g8pa_ c.37.1.20 (A:) ATPase 17.9 6.5 0.00047 26.2 -1.5 30 38-67 124-153 (333)
7 d1w7ba_ a.65.1.1 (A:) Annexin 15.4 1.2E+02 0.0089 20.4 4.9 25 46-70 107-132 (319)
8 d1b0aa2 c.58.1.2 (A:2-122) Tet 15.0 4.9 0.00036 24.5 -2.5 15 31-45 82-96 (121)
9 d1a4ia2 c.58.1.2 (A:2-126) Tet 14.4 5.4 0.0004 24.4 -2.4 15 31-45 84-98 (125)
10 d1kkoa1 c.1.11.2 (A:161-411) b 14.4 33 0.0024 23.0 1.5 12 42-53 234-245 (251)
No 1
>d1u6za3 c.55.1.8 (A:136-312) Exopolyphosphatase Ppx {Escherichia coli [TaxId: 562]}
Probab=28.98 E-value=24 Score=21.15 Aligned_cols=27 Identities=11% Similarity=0.183 Sum_probs=21.6
Q ss_pred hhccCcc--chhhhhHHHHHHHHHhccCh
Q psy11495 30 REKGVNR--EDRIHGSLLVLNELLRVSNV 56 (81)
Q Consensus 30 keKglnR--DDRiHG~LLILNELLR~sn~ 56 (81)
+..|++. -|-+-.+++|+.++++..+.
T Consensus 124 ~~~gl~~~Rad~i~~g~~il~~il~~~~~ 152 (177)
T d1u6za3 124 SLPGLSEERKTVFVPGLAILCGVFDALAI 152 (177)
T ss_dssp CCTTCCTTGGGTHHHHHHHHHHHHHHHTC
T ss_pred HhcccChhhhhhHHHHHHHHHHHHHHcCC
Confidence 4566765 49999999999999987654
No 2
>d1t6ca2 c.55.1.8 (A:133-312) Exopolyphosphatase Ppx {Aquifex aeolicus [TaxId: 63363]}
Probab=28.74 E-value=34 Score=21.06 Aligned_cols=26 Identities=15% Similarity=0.164 Sum_probs=21.2
Q ss_pred hccCc--cchhhhhHHHHHHHHHhccCh
Q psy11495 31 EKGVN--REDRIHGSLLVLNELLRVSNV 56 (81)
Q Consensus 31 eKgln--RDDRiHG~LLILNELLR~sn~ 56 (81)
-.|++ |.|-+.++++|+.++++..+.
T Consensus 128 ~~gl~~~Radii~~g~~il~~i~~~~~~ 155 (180)
T d1t6ca2 128 FRQVEDRRAKVILAGIGIFLKTLEIFEK 155 (180)
T ss_dssp STTSCGGGTTTHHHHHHHHHHHHHHHTC
T ss_pred ccCCCchhhhhHHHHHHHHHHHHHHcCC
Confidence 45787 559999999999999987553
No 3
>d1ufia_ a.30.4.1 (A:) Dimerisation domain of CENP-B {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.96 E-value=38 Score=18.25 Aligned_cols=32 Identities=28% Similarity=0.337 Sum_probs=21.9
Q ss_pred HHHHHhchhhhhhhhccCccchhhhhHHHHHH
Q psy11495 17 FEEAMSGLDEVFSREKGVNREDRIHGSLLVLN 48 (81)
Q Consensus 17 y~EA~~~f~e~~~keKglnRDDRiHG~LLILN 48 (81)
|-||+..|.-.-----.+.-|||+.+-+|-|.
T Consensus 7 fgeamayfamvkryltsfpid~rvqshilhle 38 (48)
T d1ufia_ 7 FGEAMAYFAMVKRYLTSFPIDDRVQSHILHLE 38 (48)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCchHHHHHHHHHhh
Confidence 67888877654322334678999998887663
No 4
>d2fgea2 d.185.1.1 (A:798-993) Presequence protease 1, PREP1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=23.73 E-value=11 Score=23.25 Aligned_cols=21 Identities=14% Similarity=0.153 Sum_probs=17.6
Q ss_pred cCccchhhhhHHHHHHHHHhc
Q psy11495 33 GVNREDRIHGSLLVLNELLRV 53 (81)
Q Consensus 33 glnRDDRiHG~LLILNELLR~ 53 (81)
+..++|.-+|+|.|||++|..
T Consensus 23 ~~~~~~~~~~al~vl~~iLg~ 43 (196)
T d2fgea2 23 IYSTGYELDGSAYVISKHISN 43 (196)
T ss_dssp GGGGTCCCCTHHHHHHHHHHH
T ss_pred CCCCCCCchHHHHHHHHHHcC
Confidence 346778889999999999974
No 5
>d1g8qa_ a.135.1.1 (A:) CD81 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.46 E-value=63 Score=18.80 Aligned_cols=36 Identities=11% Similarity=0.243 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhchhhhhhhhccCccchhhhhHHHHHHHHHhccChH
Q psy11495 11 ATYRLCFEEAMSGLDEVFSREKGVNREDRIHGSLLVLNELLRVSNVT 57 (81)
Q Consensus 11 qWY~~Cy~EA~~~f~e~~~keKglnRDDRiHG~LLILNELLR~sn~~ 57 (81)
+.|.+.|++++.. +++.-.--.|-+|.+-|-|+-..
T Consensus 13 ~FY~~~Y~~y~~~-----------~~~~~~k~tLk~fH~~L~CCG~~ 48 (90)
T d1g8qa_ 13 QFYDQALQQAVVD-----------DDANNAKAVVKTFHETLDCCGSS 48 (90)
T ss_dssp HHHHHHHHHHHHC-----------TTCHHHHHHHHHHHHHHTCCSCT
T ss_pred HHHHHHHHHHhhc-----------CCcchHHHHHHHHHHHHccCCCC
Confidence 5699999999763 22233444788899988886544
No 6
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=17.91 E-value=6.5 Score=26.21 Aligned_cols=30 Identities=10% Similarity=0.066 Sum_probs=26.0
Q ss_pred hhhhhHHHHHHHHHhccChHHHHHHHHHHh
Q psy11495 38 DRIHGSLLVLNELLRVSNVTWERTYEDLMN 67 (81)
Q Consensus 38 DRiHG~LLILNELLR~sn~~~Er~r~el~~ 67 (81)
.+.||++|++.|+-|.+...-+.+++-|++
T Consensus 124 ~~A~~gvl~iDEi~~~~~~~~~aLl~~me~ 153 (333)
T d1g8pa_ 124 ARANRGYLYIDECNLLEDHIVDLLLDVAQS 153 (333)
T ss_dssp HHHTTEEEEETTGGGSCHHHHHHHHHHHHH
T ss_pred ccccccEeecccHHHHHHHHHHHHhhhhcC
Confidence 467899999999999999888888888864
No 7
>d1w7ba_ a.65.1.1 (A:) Annexin II {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.42 E-value=1.2e+02 Score=20.43 Aligned_cols=25 Identities=12% Similarity=0.084 Sum_probs=17.0
Q ss_pred HHHHHHhc-cChHHHHHHHHHHhhhc
Q psy11495 46 VLNELLRV-SNVTWERTYEDLMNRLQ 70 (81)
Q Consensus 46 ILNELLR~-sn~~~Er~r~el~~~~~ 70 (81)
+|.|+|.. +|.+++.++..-.+...
T Consensus 107 ~LieIl~trs~~e~~~ik~aY~~~y~ 132 (319)
T d1w7ba_ 107 SLIEIICSRTNQELQEINRVYKEMYK 132 (319)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHSS
T ss_pred HHhhheecCCHHHHHHHHHHHHHhcC
Confidence 45788877 78888887665544443
No 8
>d1b0aa2 c.58.1.2 (A:2-122) Tetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}
Probab=14.96 E-value=4.9 Score=24.53 Aligned_cols=15 Identities=27% Similarity=0.477 Sum_probs=12.0
Q ss_pred hccCccchhhhhHHH
Q psy11495 31 EKGVNREDRIHGSLL 45 (81)
Q Consensus 31 eKglnRDDRiHG~LL 45 (81)
-+.||.|+.|||-|+
T Consensus 82 I~~lN~d~~v~GIlv 96 (121)
T d1b0aa2 82 IDTLNADNTIDGILV 96 (121)
T ss_dssp HHHHHTCTTCCEEEE
T ss_pred HHHHhCCCchhhhhh
Confidence 345899999999765
No 9
>d1a4ia2 c.58.1.2 (A:2-126) Tetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.42 E-value=5.4 Score=24.42 Aligned_cols=15 Identities=27% Similarity=0.567 Sum_probs=11.9
Q ss_pred hccCccchhhhhHHH
Q psy11495 31 EKGVNREDRIHGSLL 45 (81)
Q Consensus 31 eKglnRDDRiHG~LL 45 (81)
-+.||.|+.|||-|+
T Consensus 84 I~~lN~d~~V~GIlv 98 (125)
T d1a4ia2 84 ITSLNEDSTVHGFLV 98 (125)
T ss_dssp HHHHHHCTTCCEEEE
T ss_pred HHHHhccCCcceEEE
Confidence 345899999999765
No 10
>d1kkoa1 c.1.11.2 (A:161-411) beta-Methylaspartase {Citrobacter amalonaticus [TaxId: 35703]}
Probab=14.35 E-value=33 Score=23.05 Aligned_cols=12 Identities=42% Similarity=0.600 Sum_probs=8.7
Q ss_pred hHHHHHHHHHhc
Q psy11495 42 GSLLVLNELLRV 53 (81)
Q Consensus 42 G~LLILNELLR~ 53 (81)
|-+.+.||++|+
T Consensus 234 ~~~~~~ne~~r~ 245 (251)
T d1kkoa1 234 GLNIVFNEMNRT 245 (251)
T ss_dssp HHHHHHHHHHHH
T ss_pred chHHHHHHHHHH
Confidence 345567999987
Done!