Query psy11496
Match_columns 607
No_of_seqs 175 out of 254
Neff 4.6
Searched_HMMs 29240
Date Fri Aug 16 19:53:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11496.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11496hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hxt_A De novo protein OR329; 99.0 1.9E-08 6.6E-13 94.5 19.8 243 152-432 1-245 (252)
2 1xqr_A HSPBP1 protein; armadil 98.9 1.9E-07 6.5E-12 95.5 20.9 183 225-429 55-239 (296)
3 1wa5_B Importin alpha subunit; 98.8 4E-07 1.4E-11 97.1 20.9 281 130-447 191-482 (530)
4 4hxt_A De novo protein OR329; 98.8 3.8E-07 1.3E-11 85.7 17.9 219 130-374 20-241 (252)
5 1jdh_A Beta-catenin; beta-cate 98.7 1.5E-06 5.1E-11 91.0 23.6 241 149-429 13-257 (529)
6 1wa5_B Importin alpha subunit; 98.7 4.9E-07 1.7E-11 96.4 19.8 264 130-429 233-511 (530)
7 4db8_A Armadillo-repeat protei 98.7 3.3E-07 1.1E-11 87.2 15.7 215 130-370 30-247 (252)
8 2z6h_A Catenin beta-1, beta-ca 98.7 3.1E-06 1.1E-10 93.1 25.5 267 129-431 31-339 (644)
9 2z6h_A Catenin beta-1, beta-ca 98.7 1.5E-06 5.1E-11 95.6 22.9 241 149-429 10-254 (644)
10 4db6_A Armadillo repeat protei 98.7 5.5E-07 1.9E-11 83.5 15.8 201 146-372 5-207 (210)
11 3tpo_A Importin subunit alpha- 98.7 2.7E-06 9.4E-11 91.6 23.3 305 131-474 139-449 (529)
12 1jdh_A Beta-catenin; beta-cate 98.7 4.8E-06 1.6E-10 87.1 24.4 309 129-477 34-384 (529)
13 4db8_A Armadillo-repeat protei 98.6 1.9E-06 6.5E-11 81.9 19.1 236 155-428 14-251 (252)
14 3ul1_B Importin subunit alpha- 98.6 1.4E-06 4.7E-11 93.8 20.3 307 131-476 120-432 (510)
15 2jdq_A Importin alpha-1 subuni 98.6 6.4E-06 2.2E-10 84.2 23.4 314 130-473 83-442 (450)
16 4b8j_A Importin subunit alpha- 98.6 5.6E-06 1.9E-10 87.9 22.1 264 130-430 178-445 (528)
17 3nmw_A APC variant protein; AR 98.5 2.8E-06 9.4E-11 88.8 18.5 274 127-432 47-338 (354)
18 2jdq_A Importin alpha-1 subuni 98.4 5.2E-06 1.8E-10 84.8 17.4 262 130-428 168-443 (450)
19 4b8j_A Importin subunit alpha- 98.4 1.2E-05 4.1E-10 85.4 19.6 243 129-396 220-474 (528)
20 4db6_A Armadillo repeat protei 98.4 1.1E-05 3.6E-10 74.8 15.7 161 129-306 29-190 (210)
21 2z6g_A B-catenin; FULL-length, 98.3 1.7E-05 6E-10 90.1 20.5 220 149-398 146-369 (780)
22 3nmz_A APC variant protein; pr 98.3 1.5E-05 5.2E-10 86.3 18.3 269 131-431 167-453 (458)
23 3tpo_A Importin subunit alpha- 98.3 1.8E-05 6E-10 85.3 18.5 242 130-397 227-476 (529)
24 2z6g_A B-catenin; FULL-length, 98.2 0.00027 9.3E-09 80.4 25.5 284 130-432 337-667 (780)
25 3now_A UNC-45 protein, SD10334 98.2 8.1E-05 2.8E-09 86.0 21.2 268 129-428 396-694 (810)
26 3nmz_A APC variant protein; pr 98.2 0.00046 1.6E-08 74.8 25.7 277 132-428 49-408 (458)
27 3grl_A General vesicular trans 98.2 4.8E-05 1.6E-09 85.8 18.5 255 130-400 40-322 (651)
28 1xm9_A Plakophilin 1; armadill 98.2 0.00038 1.3E-08 74.0 24.6 275 130-429 20-407 (457)
29 1xm9_A Plakophilin 1; armadill 98.1 0.00069 2.4E-08 72.0 25.6 186 154-357 3-196 (457)
30 3ul1_B Importin subunit alpha- 98.1 4.4E-05 1.5E-09 82.1 16.5 243 129-397 207-457 (510)
31 3nmw_A APC variant protein; AR 98.0 0.00012 4.1E-09 76.5 15.8 224 129-374 101-334 (354)
32 3now_A UNC-45 protein, SD10334 98.0 0.00016 5.5E-09 83.5 18.0 243 147-428 489-737 (810)
33 1xqr_A HSPBP1 protein; armadil 97.8 0.00052 1.8E-08 70.0 16.4 194 126-344 51-249 (296)
34 3opb_A SWI5-dependent HO expre 97.4 0.0097 3.3E-07 68.6 21.7 330 129-491 351-745 (778)
35 3l6x_A Catenin delta-1; cateni 97.2 0.042 1.4E-06 61.4 23.6 189 151-357 46-246 (584)
36 3l6x_A Catenin delta-1; cateni 97.1 0.018 6.1E-07 64.4 19.5 269 132-429 68-385 (584)
37 3opb_A SWI5-dependent HO expre 97.0 0.0074 2.5E-07 69.5 15.3 265 147-447 451-747 (778)
38 3tt9_A Plakophilin-2; cell adh 97.0 0.0058 2E-07 60.7 12.7 185 154-358 9-206 (233)
39 3grl_A General vesicular trans 96.7 0.028 9.6E-07 63.6 15.9 223 133-374 143-394 (651)
40 3tt9_A Plakophilin-2; cell adh 96.6 0.037 1.3E-06 54.9 14.5 189 228-431 28-232 (233)
41 4gmo_A Putative uncharacterize 96.3 0.04 1.4E-06 61.8 14.6 200 114-330 44-261 (684)
42 3eg5_B Protein diaphanous homo 94.3 1 3.4E-05 47.6 16.1 189 253-450 67-269 (383)
43 2f31_A Diaphanous protein homo 93.2 1.9 6.5E-05 42.1 15.0 187 255-450 3-203 (233)
44 2bnx_A Diaphanous protein homo 93.0 2.6 8.8E-05 44.5 16.5 187 255-450 7-207 (386)
45 3dad_A FH1/FH2 domain-containi 88.7 6.8 0.00023 41.2 14.4 167 126-307 132-316 (339)
46 4gmo_A Putative uncharacterize 81.0 10 0.00034 42.5 12.1 188 200-399 31-236 (684)
47 3dad_A FH1/FH2 domain-containi 78.0 15 0.00051 38.6 11.5 152 278-447 142-306 (339)
48 4fdd_A Transportin-1; heat rep 67.7 76 0.0026 35.5 15.0 50 132-181 606-657 (852)
49 3eg5_B Protein diaphanous homo 58.6 41 0.0014 35.4 10.0 215 195-430 101-344 (383)
50 3ltj_A Alpharep-4; protein eng 54.7 1E+02 0.0034 27.6 10.8 30 154-183 46-75 (201)
51 3b2a_A TON_1937, putative unch 43.7 2.3E+02 0.0078 28.8 12.0 77 202-286 31-107 (265)
52 3ltm_A Alpha-REP4; protein eng 41.6 1.9E+02 0.0066 25.9 10.6 31 153-183 50-80 (211)
53 3ltm_A Alpha-REP4; protein eng 39.3 2.1E+02 0.0072 25.6 10.8 33 152-184 18-50 (211)
54 2i9c_A Hypothetical protein RP 38.6 18 0.00063 32.8 2.9 34 145-178 47-83 (123)
55 3ltj_A Alpharep-4; protein eng 37.3 65 0.0022 28.8 6.5 30 154-183 108-137 (201)
56 2f31_A Diaphanous protein homo 37.1 70 0.0024 30.9 7.1 102 196-309 36-144 (233)
57 2bpt_A Importin beta-1 subunit 32.6 3.2E+02 0.011 29.8 12.2 187 130-333 387-584 (861)
58 1oyz_A Hypothetical protein YI 20.2 5.3E+02 0.018 24.0 13.2 31 154-184 129-159 (280)
No 1
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=99.03 E-value=1.9e-08 Score=94.53 Aligned_cols=243 Identities=15% Similarity=0.199 Sum_probs=189.4
Q ss_pred cCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHHHHHhhhhccCCchhhhhhhhhhH
Q psy11496 152 LKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCALLVQNLERLDETVKEESDGVHNTL 231 (607)
Q Consensus 152 l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~lLv~nL~RldE~~~~e~~gV~~~L 231 (607)
+|+++.|+.+|.|+|.++...++..|..++..+. .....+++.+++..|++-|.. .+..-..+++
T Consensus 1 ~~~i~~L~~~L~~~~~~~~~~a~~~L~~l~~~~~---------~~~~~~~~~g~i~~L~~ll~~------~~~~v~~~a~ 65 (252)
T 4hxt_A 1 MNDVEKLVKLLTSTDSETQKEAARDLAEIASGPA---------SAIKAIVDAGGVEVLVKLLTS------TDSEVQKEAA 65 (252)
T ss_dssp CCHHHHHHHHTTCSCHHHHHHHHHHHHHHHTSCH---------HHHHHHHHTTHHHHHHHHTTC------SCHHHHHHHH
T ss_pred CCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCc---------HHHHHHHHCCCHHHHHHHHhC------CCHHHHHHHH
Confidence 4788999999999999999999999999987542 234566777899999988853 1245567888
Q ss_pred HHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHHHhhhhcC
Q psy11496 232 GIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQLAYYKRH 311 (607)
Q Consensus 232 ~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~la~yrk~ 311 (607)
.++-||..-.++....+.+.+.++.+++-++.. ...-+.+|..+|+-|...++.++..+.+.++++.|++.+..
T Consensus 66 ~~L~~l~~~~~~~~~~~~~~~~i~~l~~ll~~~--~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~---- 139 (252)
T 4hxt_A 66 RALANIASGPDEAIKAIVDAGGVEVLVKLLTST--DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTS---- 139 (252)
T ss_dssp HHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--SHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTC----
T ss_pred HHHHHHHcCChHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcC----
Confidence 899999986688999999989999999988853 45567778888999888899999999988889999888762
Q ss_pred CCCChHHHHHHHHHHHHHHhhhC-CHhhHHHhhccchHHHHHHHHhccc-CCcCchhHHHHHhhcCCCCchhhhhHHhhh
Q psy11496 312 DPNTPEEQEMMENLFDTLCSCLM-LEENKERFLKGEGLQLMNLMLRERK-VSRNGSLKVLDHAICGPSGKDNANKFVDIL 389 (607)
Q Consensus 312 Dp~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e~eGveLml~mL~~~k-~~r~~AlkvlD~al~~~~~~~~c~kFVe~~ 389 (607)
+ ..+...+...+|+.+.. .+.++..+.+..++..++.+|+... ..+..|..+|-.++. ..+.++..+++.+
T Consensus 140 -~----~~~~~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~--~~~~~~~~l~~~~ 212 (252)
T 4hxt_A 140 -T----DSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIAS--GPTSAIKAIVDAG 212 (252)
T ss_dssp -S----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTT--SBHHHHHHHHHTT
T ss_pred -C----CHHHHHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHc--CCHHHHHHHHHCC
Confidence 1 24566777888898886 6667789999999999999998643 335567888887776 3578899999999
Q ss_pred chhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcCCCc
Q psy11496 390 GLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRNCSG 432 (607)
Q Consensus 390 GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~l~~ 432 (607)
|+..+..++.. ...+.-++++.+++.+..+-+.
T Consensus 213 ~i~~L~~ll~~----------~~~~v~~~a~~~L~~l~~~~~~ 245 (252)
T 4hxt_A 213 GVEVLQKLLTS----------TDSEVQKEAQRALENIKSGGWL 245 (252)
T ss_dssp HHHHHHHGGGC----------SCHHHHHHHHHHHHHHHHTCBC
T ss_pred CHHHHHHHHCC----------CcHHHHHHHHHHHHHHHcCCCc
Confidence 99988654432 1246677888888877665543
No 2
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=98.85 E-value=1.9e-07 Score=95.47 Aligned_cols=183 Identities=14% Similarity=0.205 Sum_probs=147.5
Q ss_pred hhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHH
Q psy11496 225 DGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQ 304 (607)
Q Consensus 225 ~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~ 304 (607)
+.-..+|.+++++++ +.+.+..+++.+-++.++.|+-. .+....+.+|+.+|+.+.|+++.++..+.+.+|++.|++.
T Consensus 55 e~k~~Al~~L~~lv~-~~dna~~~~~~G~l~~Lv~~lL~-s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~L 132 (296)
T 1xqr_A 55 QEREGALELLADLCE-NMDNAADFCQLSGMHLLVGRYLE-AGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRL 132 (296)
T ss_dssp HHHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHTTTT-CSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-ChhhHHHHHHcCCHHHHHHHHHc-CCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHH
Confidence 445567888999998 77888889988878888884433 3456789999999999999999999999999999999999
Q ss_pred HhhhhcCCCCChHHHHHHHHHHHHHHhhhC-CHhhHHHhhccchHHHHHHHHhccc-CCcCchhHHHHHhhcCCCCchhh
Q psy11496 305 LAYYKRHDPNTPEEQEMMENLFDTLCSCLM-LEENKERFLKGEGLQLMNLMLRERK-VSRNGSLKVLDHAICGPSGKDNA 382 (607)
Q Consensus 305 la~yrk~Dp~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e~eGveLml~mL~~~k-~~r~~AlkvlD~al~~~~~~~~c 382 (607)
|.. +|. .+...+.+-+|+++.. .++++..|....|+..++.+|+..- ..+..|..++.+++.+ +++.+
T Consensus 133 L~~----~~~----~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~--~~~~~ 202 (296)
T 1xqr_A 133 LDR----DAC----DTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVG--HPEHK 202 (296)
T ss_dssp HHH----CSC----HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHH--CGGGH
T ss_pred Hcc----CCC----HHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhC--ChHHH
Confidence 874 221 4667788899999984 7888999999999999999998642 3455688888888875 58899
Q ss_pred hhHHhhhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcC
Q psy11496 383 NKFVDILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRN 429 (607)
Q Consensus 383 ~kFVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~ 429 (607)
..|++.++++.++.++... ..+..++++..+.++.+.
T Consensus 203 ~~vv~~g~i~~Lv~LL~~~----------d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 203 GTLCSMGMVQQLVALVRTE----------HSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHHHHTTHHHHHHHHHTSC----------CSTHHHHHHHHHHHHHTT
T ss_pred HHHHHcCCHHHHHHHHcCC----------ChhHHHHHHHHHHHHHhC
Confidence 9999999999997754432 356778898888888776
No 3
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.77 E-value=4e-07 Score=97.09 Aligned_cols=281 Identities=11% Similarity=0.058 Sum_probs=197.5
Q ss_pred HHHHHHHhhcccC-CCchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHH
Q psy11496 130 HTTIQELHAIATV-PDLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCAL 208 (607)
Q Consensus 130 d~~Ik~l~~La~~-P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~l 208 (607)
..++..|..|+.. |+....++..|+++.|+.+|.+++.++...++..|..|.......- . ..+..+++..
T Consensus 191 ~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~---~------~~~~~~~l~~ 261 (530)
T 1wa5_B 191 EQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQP---D------WSVVSQALPT 261 (530)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHGGGSCCHHHHHHHHHHHHHHHCCSSSCC---C------HHHHGGGHHH
T ss_pred HHHHHHHHHHhCCCccchHHHHHcCcHHHHHHHhccCCHHHHHHHHHHHHHHhCCCCCCC---c------HHHHHhHHHH
Confidence 3456667777766 5666677889999999999999999999999999999986531111 0 1223466777
Q ss_pred HHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhH
Q psy11496 209 LVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNEN 288 (607)
Q Consensus 209 Lv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~ 288 (607)
|++-|.. .+..-..+++.++-||....|+....+...++++.|+.-+... ...-..+|..+|+-|...++..
T Consensus 262 L~~lL~~------~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv~lL~~~--~~~v~~~a~~~L~~l~~~~~~~ 333 (530)
T 1wa5_B 262 LAKLIYS------MDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHE--STLVQTPALRAVGNIVTGNDLQ 333 (530)
T ss_dssp HHHHTTC------CCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHHHGGGCS--CHHHHHHHHHHHHHHTTSCHHH
T ss_pred HHHHHcC------CCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHHHHHCCC--ChhhHHHHHHHHHHHHcCCHHH
Confidence 7776631 2345667889999999987788888888888999999988742 3445667778888888888888
Q ss_pred HHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC-CHhhHHHhhccchHHHHHHHHhccc-CCcCchh
Q psy11496 289 RKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM-LEENKERFLKGEGLQLMNLMLRERK-VSRNGSL 366 (607)
Q Consensus 289 ~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e~eGveLml~mL~~~k-~~r~~Al 366 (607)
...+...++++.|++.+.. + ......+..-+|+.+.. .+.....+.+..++..++.+|+... ..+..|.
T Consensus 334 ~~~~~~~~~l~~L~~lL~~-----~----~~~vr~~A~~aL~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~ 404 (530)
T 1wa5_B 334 TQVVINAGVLPALRLLLSS-----P----KENIKKEACWTISNITAGNTEQIQAVIDANLIPPLVKLLEVAEYKTKKEAC 404 (530)
T ss_dssp HHHHHHTTHHHHHHHHTTC-----S----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHcchHHHHHHHHcC-----C----CHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHH
Confidence 7777777888888887753 2 13344455667777774 6777788888899999999997642 2355577
Q ss_pred HHHHHhhcCCCCc--hhhhhHHhhhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcCCCch------hhHHH
Q psy11496 367 KVLDHAICGPSGK--DNANKFVDILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRNCSGP------QRQRL 438 (607)
Q Consensus 367 kvlD~al~~~~~~--~~c~kFVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~l~~~------~r~Rl 438 (607)
.+|-.++.+. ++ +.+..+++.+++..+..++... ..+...+++..+..++...+.. .....
T Consensus 405 ~aL~~l~~~~-~~~~~~~~~l~~~~~l~~L~~ll~~~----------~~~v~~~al~aL~~l~~~~~~~~~~~~~~~~~~ 473 (530)
T 1wa5_B 405 WAISNASSGG-LQRPDIIRYLVSQGCIKPLCDLLEIA----------DNRIIEVTLDALENILKMGEADKEARGLNINEN 473 (530)
T ss_dssp HHHHHHHHHT-TTCTHHHHHHHHTTCHHHHHHHTTTC----------CHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCHH
T ss_pred HHHHHHHhcC-CCcHHHHHHHHHCCCHHHHHHHHhCC----------CHHHHHHHHHHHHHHHHhhhhhhhcccccccHH
Confidence 7777776632 24 7889999999999987655432 2456667777777776554321 11234
Q ss_pred HHHHhhcch
Q psy11496 439 LSKFTENDH 447 (607)
Q Consensus 439 l~KFvE~~~ 447 (607)
+..|.+.++
T Consensus 474 ~~~l~~~g~ 482 (530)
T 1wa5_B 474 ADFIEKAGG 482 (530)
T ss_dssp HHHHHHTTH
T ss_pred HHHHHHcCc
Confidence 555665544
No 4
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=98.75 E-value=3.8e-07 Score=85.67 Aligned_cols=219 Identities=15% Similarity=0.236 Sum_probs=169.7
Q ss_pred HHHHHHHhhcccCC-CchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHH
Q psy11496 130 HTTIQELHAIATVP-DLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCAL 208 (607)
Q Consensus 130 d~~Ik~l~~La~~P-~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~l 208 (607)
..++..|..++..+ +....+++.|+++.|+.+|.++|.++...++..|..|+..+ . .....+++.+++..
T Consensus 20 ~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~-----~----~~~~~~~~~~~i~~ 90 (252)
T 4hxt_A 20 KEAARDLAEIASGPASAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGP-----D----EAIKAIVDAGGVEV 90 (252)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSC-----H----HHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCC-----h----HHHHHHHHCCCHHH
Confidence 45677777777655 57888999999999999999999999999999999998752 1 22345567788888
Q ss_pred HHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhH
Q psy11496 209 LVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNEN 288 (607)
Q Consensus 209 Lv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~ 288 (607)
|++-|.. .+..-..+++.++-||....|.....+.+.+.++.+++-++.. ...-+.+|..+|+-|...++.+
T Consensus 91 l~~ll~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~--~~~~~~~a~~~L~~l~~~~~~~ 162 (252)
T 4hxt_A 91 LVKLLTS------TDSEVQKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTST--DSEVQKEAARALANIASGPDEA 162 (252)
T ss_dssp HHHHTTC------SSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSCHHH
T ss_pred HHHHHcC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHcCCHHH
Confidence 9888852 2345667889999999987899999999989999999988853 3456777888899888888888
Q ss_pred HHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC-CHhhHHHhhccchHHHHHHHHhccc-CCcCchh
Q psy11496 289 RKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM-LEENKERFLKGEGLQLMNLMLRERK-VSRNGSL 366 (607)
Q Consensus 289 ~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e~eGveLml~mL~~~k-~~r~~Al 366 (607)
+..+.+.++++.|++.+.. .+ .+...+...+|+.+.. .+.++..+.+..+++.++.+++... ..+..|.
T Consensus 163 ~~~~~~~~~i~~L~~ll~~---~~------~~v~~~a~~~L~~l~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~ 233 (252)
T 4hxt_A 163 IKAIVDAGGVEVLVKLLTS---TD------SEVQKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQ 233 (252)
T ss_dssp HHHHHHTTHHHHHHHHTTC---SC------HHHHHHHHHHHHHHTTSBHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHH
T ss_pred HHHHHHCcCHHHHHHHHCC---CC------HHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHCCCcHHHHHHHH
Confidence 8888888889999988862 11 3555666777888885 7888999999999999999887543 2234455
Q ss_pred HHHHHhhc
Q psy11496 367 KVLDHAIC 374 (607)
Q Consensus 367 kvlD~al~ 374 (607)
.+|-.++.
T Consensus 234 ~~L~~l~~ 241 (252)
T 4hxt_A 234 RALENIKS 241 (252)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 55555544
No 5
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.74 E-value=1.5e-06 Score=91.00 Aligned_cols=241 Identities=15% Similarity=0.170 Sum_probs=170.3
Q ss_pred HHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHh-cchHHHHHHhhhhccCCchhhhhhh
Q psy11496 149 LVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLD-QQVCALLVQNLERLDETVKEESDGV 227 (607)
Q Consensus 149 ~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e-~~l~~lLv~nL~RldE~~~~e~~gV 227 (607)
.+..|+++.|+.||.|+|+++...++..|..|...+. . ...++. .+++..|++.|..= .+....
T Consensus 13 ~~~~~~i~~Lv~lL~~~~~~v~~~A~~~L~~l~~~~~------~----~~~~~~~~~~i~~Lv~~L~~~-----~~~~~~ 77 (529)
T 1jdh_A 13 ELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA------S----RHAIMRSPQMVSAIVRTMQNT-----NDVETA 77 (529)
T ss_dssp ----CHHHHHHHHHTCSCHHHHHHHHHHHHHHHTSHH------H----HHHHHTCHHHHHHHHHHHHHC-----CCHHHH
T ss_pred hhhHhhHHHHHHHhCCCCHHHHHHHHHHHHHHHcCCc------c----HHHHHhCcchHHHHHHHHhcC-----CCHHHH
Confidence 3568999999999999999999999999999986431 1 123333 25677777777531 133445
Q ss_pred hhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHHHhh
Q psy11496 228 HNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQLAY 307 (607)
Q Consensus 228 ~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~la~ 307 (607)
.++...+-||.. .++....+++.+.++.|++-++.. .+.-..+|..+|.-|...++.++..+.+.++++.|++.+..
T Consensus 78 ~~a~~~L~~ls~-~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~ 154 (529)
T 1jdh_A 78 RCTAGTLHNLSH-HREGLLAIFKSGGIPALVKMLGSP--VDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK 154 (529)
T ss_dssp HHHHHHHHHHTT-SHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGC
T ss_pred HHHHHHHHHHHc-CchhHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhc
Confidence 677777888765 677788888889999999999863 34567788889999988888888888888999999988753
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHhhhC-CHhhHHHhhccchHHHHHHHHhcccCC--cCchhHHHHHhhcCCCCchhhhh
Q psy11496 308 YKRHDPNTPEEQEMMENLFDTLCSCLM-LEENKERFLKGEGLQLMNLMLRERKVS--RNGSLKVLDHAICGPSGKDNANK 384 (607)
Q Consensus 308 yrk~Dp~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e~eGveLml~mL~~~k~~--r~~AlkvlD~al~~~~~~~~c~k 384 (607)
+ . .+.......+|+.+.. .++++..+.+..|++.++.+|+..... ...+..++-.++. ++.++..
T Consensus 155 -----~-~---~~~~~~~~~~L~~la~~~~~~~~~i~~~~~i~~L~~ll~~~~~~~~~~~a~~~L~~l~~---~~~~~~~ 222 (529)
T 1jdh_A 155 -----T-N---VKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV---CSSNKPA 222 (529)
T ss_dssp -----C-C---HHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCCCHHHHHHHHHHHHHHTT---STTHHHH
T ss_pred -----C-C---HHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHhCChHHHHHHHHHHHHHHhc---CcccHHH
Confidence 1 1 2344455666776664 689999999999999999999875321 2224555555543 5789999
Q ss_pred HHhhhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcC
Q psy11496 385 FVDILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRN 429 (607)
Q Consensus 385 FVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~ 429 (607)
+++.+|+..+..++... ..+...+++..+..+.+.
T Consensus 223 ~~~~g~~~~L~~ll~~~----------~~~~~~~a~~~L~~l~~~ 257 (529)
T 1jdh_A 223 IVEAGGMQALGLHLTDP----------SQRLVQNCLWTLRNLSDA 257 (529)
T ss_dssp HHHTTHHHHHHTTTTSS----------CHHHHHHHHHHHHHHHTT
T ss_pred HHHCCCHHHHHHHHhCC----------ChHHHHHHHHHHHHHhcC
Confidence 99999999986644321 134445556555555443
No 6
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=98.72 E-value=4.9e-07 Score=96.39 Aligned_cols=264 Identities=15% Similarity=0.087 Sum_probs=191.2
Q ss_pred HHHHHHHhhcccCC-CchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHH
Q psy11496 130 HTTIQELHAIATVP-DLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCAL 208 (607)
Q Consensus 130 d~~Ik~l~~La~~P-~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~l 208 (607)
..++..|..|+.++ ...+..+..|+++.|+.+|.|++.++...++..|..|++.. . ..+..+++.+++..
T Consensus 233 ~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~-----~----~~~~~~~~~~~v~~ 303 (530)
T 1wa5_B 233 RTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGP-----Q----EAIQAVIDVRIPKR 303 (530)
T ss_dssp HHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSC-----H----HHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCC-----H----HHHHHHHhcCcHHH
Confidence 44667777788775 44456667899999999999999999999999999998642 1 23455677889999
Q ss_pred HHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhH
Q psy11496 209 LVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNEN 288 (607)
Q Consensus 209 Lv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~ 288 (607)
|++.|.. .+..-...++.++-||..-.+.....+...+++++|+.-++.. ...-+..|...|+-|...++..
T Consensus 304 Lv~lL~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~lL~~~--~~~vr~~A~~aL~~l~~~~~~~ 375 (530)
T 1wa5_B 304 LVELLSH------ESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP--KENIKKEACWTISNITAGNTEQ 375 (530)
T ss_dssp HHHGGGC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSCHHH
T ss_pred HHHHHCC------CChhhHHHHHHHHHHHHcCCHHHHHHHHHcchHHHHHHHHcCC--CHHHHHHHHHHHHHHHcCCHHH
Confidence 9998852 2345567788999999987788888888888999999999863 3345666777888888878888
Q ss_pred HHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC--CH--hhHHHhhccchHHHHHHHHhccc-CCcC
Q psy11496 289 RKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM--LE--ENKERFLKGEGLQLMNLMLRERK-VSRN 363 (607)
Q Consensus 289 ~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~--~~--~nk~~F~e~eGveLml~mL~~~k-~~r~ 363 (607)
...+.+.+++..|++.+.. . +.+...+...+|+.+.. .+ ++...+.+..++..++.+|.... ..+.
T Consensus 376 ~~~~~~~~~l~~L~~lL~~---~------~~~v~~~a~~aL~~l~~~~~~~~~~~~~l~~~~~l~~L~~ll~~~~~~v~~ 446 (530)
T 1wa5_B 376 IQAVIDANLIPPLVKLLEV---A------EYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRIIE 446 (530)
T ss_dssp HHHHHHTTCHHHHHHHHHH---S------CHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHTTCHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhc---C------CHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHCCCHHHHHHHHhCCCHHHHH
Confidence 7777777889999998853 1 22445556667777764 34 67788888889999999998642 2234
Q ss_pred chhHHHHHhhcCC---------CCchhhhhHHhhhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcC
Q psy11496 364 GSLKVLDHAICGP---------SGKDNANKFVDILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRN 429 (607)
Q Consensus 364 ~AlkvlD~al~~~---------~~~~~c~kFVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~ 429 (607)
.|+..|..++... .....|..|.+.+|++.+..+.-. +..+.-+++..++..++..
T Consensus 447 ~al~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~L~~L~~~----------~~~~v~~~a~~il~~~~~~ 511 (530)
T 1wa5_B 447 VTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQN----------ENDKIYEKAYKIIETYFGE 511 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSSCHHHHHHHHTTHHHHHHGGGGC----------SCHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHhhhhhhhcccccccHHHHHHHHcCcHHHHHHHHcC----------CCHHHHHHHHHHHHHHCCc
Confidence 4666666555421 123478889999999998653221 2245567888888776654
No 7
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=98.70 E-value=3.3e-07 Score=87.19 Aligned_cols=215 Identities=14% Similarity=0.176 Sum_probs=162.1
Q ss_pred HHHHHHH-hhcccCCCchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHH
Q psy11496 130 HTTIQEL-HAIATVPDLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCAL 208 (607)
Q Consensus 130 d~~Ik~l-~~La~~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~l 208 (607)
..+++.| ..++..++-...+++.|+++.|+.+|.|++.++...++..|..++..+ .+ ....+++.+++..
T Consensus 30 ~~a~~~L~~~l~~~~~~~~~~~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~-----~~----~~~~i~~~g~i~~ 100 (252)
T 4db8_A 30 LSATRKFSQILSDGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG-----NE----QIQAVIDAGALPA 100 (252)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSC-----HH----HHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHcCCCchHHHHHHcCcHHHHHHHHcCCCHHHHHHHHHHHHHHhcCC-----HH----HHHHHHHcCCHHH
Confidence 3556666 455555666778999999999999999999999999999999998642 12 2355667789999
Q ss_pred HHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhH
Q psy11496 209 LVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNEN 288 (607)
Q Consensus 209 Lv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~ 288 (607)
|++-|.. .+..-..+++.++-||..-.+.....+.+.+.++.|++-++.. ...-+.+|...|+-|...++.+
T Consensus 101 L~~lL~~------~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~~~~ 172 (252)
T 4db8_A 101 LVQLLSS------PNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGGNEQ 172 (252)
T ss_dssp HHHGGGC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCS--CHHHHHHHHHHHHHHTTSCHHH
T ss_pred HHHHHcC------CCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCC--CHHHHHHHHHHHHHHHcCChHH
Confidence 9988864 2345667888999999885554558888889999999999753 3345667777888888888888
Q ss_pred HHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhh-CCHhhHHHhhccchHHHHHHHHhcccC-CcCchh
Q psy11496 289 RKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCL-MLEENKERFLKGEGLQLMNLMLRERKV-SRNGSL 366 (607)
Q Consensus 289 ~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL-~~~~nk~~F~e~eGveLml~mL~~~k~-~r~~Al 366 (607)
+..+.+.++++.|++.+.. + ..+...+...+|+.+. ..+.++..+.+..|++.++.+++...+ .+..|.
T Consensus 173 ~~~~~~~~~i~~L~~ll~~-----~----~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~A~ 243 (252)
T 4db8_A 173 IQAVIDAGALPALVQLLSS-----P----NEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQ 243 (252)
T ss_dssp HHHHHHTTCHHHHHHGGGC-----S----SHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHTTTTCSSSHHHHTHH
T ss_pred HHHHHHCCCHHHHHHHHCC-----C----CHHHHHHHHHHHHHHhcCCHHHHHHHHHCCcHHHHHHHhCCCCHHHHHHHH
Confidence 8888888889999988863 2 2445667778888888 478889999999999999988876432 233344
Q ss_pred HHHH
Q psy11496 367 KVLD 370 (607)
Q Consensus 367 kvlD 370 (607)
.++-
T Consensus 244 ~~L~ 247 (252)
T 4db8_A 244 EALE 247 (252)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 8
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.69 E-value=3.1e-06 Score=93.07 Aligned_cols=267 Identities=15% Similarity=0.172 Sum_probs=189.2
Q ss_pred HHHHHHHHhhcccCCCchHHHHhc-CChHHHHHhhccC-CchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchH
Q psy11496 129 LHTTIQELHAIATVPDLYPLLVQL-KAVSSMLELVLHE-NTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVC 206 (607)
Q Consensus 129 Ld~~Ik~l~~La~~P~LYp~~v~l-~~v~sL~~LLsHe-NtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~ 206 (607)
-..++..|..|+..++--..++.. |+++.|+.+|.+. +.++...++..|..|+..+ + ....+++.+++
T Consensus 31 r~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~------~----~~~~i~~~g~i 100 (644)
T 2z6h_A 31 VNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHR------E----GLLAIFKSGGI 100 (644)
T ss_dssp HHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSH------H----HHHHHHTTTHH
T ss_pred HHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcCh------h----hHHHHHHcCCH
Confidence 456778888888888744445544 8999999999865 8999999999999888642 1 24556677888
Q ss_pred HHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcCh
Q psy11496 207 ALLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNN 286 (607)
Q Consensus 207 ~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~ 286 (607)
..|++-|.. .+..-..+++..+-||....+.....+.+.+.++.|++-++... .+-...+...|..|...++
T Consensus 101 ~~Lv~lL~~------~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~~~--~~~~~~a~~~L~~La~~~~ 172 (644)
T 2z6h_A 101 PALVKMLGS------PVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTN--VKFLAITTDCLQILAYGNQ 172 (644)
T ss_dssp HHHHHHTTC------SSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGCCC--HHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHhC------CCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCcCC--HHHHHHHHHHHHHHHhcCc
Confidence 999988753 13466788899999999866667777778899999999998642 2233344567777777789
Q ss_pred hHHHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhCCHhhHHHhhccchHHHHHHHHhcccC------
Q psy11496 287 ENRKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLMLEENKERFLKGEGLQLMNLMLRERKV------ 360 (607)
Q Consensus 287 ~~~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~~~~nk~~F~e~eGveLml~mL~~~k~------ 360 (607)
+++..+++.+|++.|++.+... . .....+++..+|+.+-..+.+|..+.+..|+..++.+++....
T Consensus 173 ~~~~~i~~~g~v~~Lv~lL~~~-----~---~~~~~~~a~~~L~nLs~~~~~~~~l~~~g~l~~L~~ll~~~~~~~~~~a 244 (644)
T 2z6h_A 173 ESKLIILASGGPQALVNIMRTY-----T---YEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNC 244 (644)
T ss_dssp HHHHHHHHTTHHHHHHHHHTTC-----C---CHHHHHHHHHHHHHHTTCTTHHHHHHHTTHHHHHHTTTTCSCHHHHHHH
T ss_pred HHHHHHHHcCChHHHHHHHHcC-----C---hHHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhcCCHHHHHHH
Confidence 9999999999999999988642 1 1344566777777777889999999988888888776654210
Q ss_pred ----------------------------------CcCchhHHHHHhhcCCCCchhhhhHHhhhchhhhHHhhhcCcccCc
Q psy11496 361 ----------------------------------SRNGSLKVLDHAICGPSGKDNANKFVDILGLRTIFPLFMKTPKKNR 406 (607)
Q Consensus 361 ----------------------------------~r~~AlkvlD~al~~~~~~~~c~kFVe~~GLk~lF~lfMkk~kk~k 406 (607)
.+..|..+|-.+++ .++.++..+++.+|+..+..++....
T Consensus 245 ~~~L~nL~~~~~~~~~~~~~i~~Lv~lL~~~d~~v~~~a~~aL~~L~~--~~~~~~~~v~~~g~v~~Lv~lL~~~~---- 318 (644)
T 2z6h_A 245 LWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTC--NNYKNKMMVCQVGGIEALVRTVLRAG---- 318 (644)
T ss_dssp HHHHHHHGGGCTTCCSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHT--TCHHHHHHHHHTTHHHHHHHHHHHHT----
T ss_pred HHHHHHHhhcchhhhhhhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHc--CCHHHHHHHHHcCCHHHHHHHHHccC----
Confidence 01113444444444 24678888999999999876555311
Q ss_pred CCCcchhhhhHHHHHHHHhhhcCCC
Q psy11496 407 RKIITVEEHEEHVVSIKANMLRNCS 431 (607)
Q Consensus 407 k~~~~~~e~~Eh~~siiaSLlr~l~ 431 (607)
...+..+.++..+..+....+
T Consensus 319 ----~~~~v~~~a~~aL~nL~~~~~ 339 (644)
T 2z6h_A 319 ----DREDITEPAICALRHLTSRHQ 339 (644)
T ss_dssp ----TCHHHHHHHHHHHHHHTSSST
T ss_pred ----CcHHHHHHHHHHHHHHhcCCc
Confidence 113556667777766654433
No 9
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=98.69 E-value=1.5e-06 Score=95.58 Aligned_cols=241 Identities=16% Similarity=0.177 Sum_probs=170.8
Q ss_pred HHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHh-cchHHHHHHhhhhccCCchhhhhhh
Q psy11496 149 LVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLD-QQVCALLVQNLERLDETVKEESDGV 227 (607)
Q Consensus 149 ~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e-~~l~~lLv~nL~RldE~~~~e~~gV 227 (607)
.+..|+++.|+.||.|+|..+...++..|..|...+. . ...++. .+++..||+.|..= ++..-.
T Consensus 10 ~~~~g~i~~Lv~lL~~~~~~vr~~A~~~L~~La~~~~------~----~~~i~~~~~~i~~Lv~~L~~~-----~~~~~~ 74 (644)
T 2z6h_A 10 ELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA------S----RHAIMRSPQMVSAIVRTMQNT-----NDVETA 74 (644)
T ss_dssp --CTTTHHHHHHHHTCSCHHHHHHHHHHHHHHHTSTT------H----HHHHTTCHHHHHHHHHHHHSC-----CCHHHH
T ss_pred hhhhchHHHHHHHHcCCCHHHHHHHHHHHHHHHCCCh------h----HHHHHhccChHHHHHHHHhcC-----CCHHHH
Confidence 4788999999999999999999999999999987542 1 122333 25677777777531 123344
Q ss_pred hhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHHHhh
Q psy11496 228 HNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQLAY 307 (607)
Q Consensus 228 ~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~la~ 307 (607)
.++...+-||.. .++....+++.+.++.|++-++.. ...-+.+|..+|.-|....+..+..+.+.++++.|++.+..
T Consensus 75 ~~A~~~L~~Ls~-~~~~~~~i~~~g~i~~Lv~lL~~~--~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~lL~~ 151 (644)
T 2z6h_A 75 RCTAGTLHNLSH-HREGLLAIFKSGGIPALVKMLGSP--VDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK 151 (644)
T ss_dssp HHHHHHHHHHTT-SHHHHHHHHTTTHHHHHHHHTTCS--SHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGC
T ss_pred HHHHHHHHHHhc-ChhhHHHHHHcCCHHHHHHHHhCC--CHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHHHCc
Confidence 556666667765 677777788888999999988763 34567888889999988877888888888899999988864
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHhhhC-CHhhHHHhhccchHHHHHHHHhcccC--CcCchhHHHHHhhcCCCCchhhhh
Q psy11496 308 YKRHDPNTPEEQEMMENLFDTLCSCLM-LEENKERFLKGEGLQLMNLMLRERKV--SRNGSLKVLDHAICGPSGKDNANK 384 (607)
Q Consensus 308 yrk~Dp~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e~eGveLml~mL~~~k~--~r~~AlkvlD~al~~~~~~~~c~k 384 (607)
+ .. +.......+|+.+.. .+++|..+.+..|++.++.+|+.... .+..|.++|-.++. ++.++..
T Consensus 152 -----~-~~---~~~~~a~~~L~~La~~~~~~~~~i~~~g~v~~Lv~lL~~~~~~~~~~~a~~~L~nLs~---~~~~~~~ 219 (644)
T 2z6h_A 152 -----T-NV---KFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV---CSSNKPA 219 (644)
T ss_dssp -----C-CH---HHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHTT---CTTHHHH
T ss_pred -----C-CH---HHHHHHHHHHHHHHhcCcHHHHHHHHcCChHHHHHHHHcCChHHHHHHHHHHHHHHhc---CcccHHH
Confidence 1 12 333344566777764 89999999999999999999986531 12235566655553 5789999
Q ss_pred HHhhhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcC
Q psy11496 385 FVDILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRN 429 (607)
Q Consensus 385 FVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~ 429 (607)
+++.+|+..+..++.. . ..+..++++..+..+.+.
T Consensus 220 l~~~g~l~~L~~ll~~-~---------~~~~~~~a~~~L~nL~~~ 254 (644)
T 2z6h_A 220 IVEAGGMQALGLHLTD-P---------SQRLVQNCLWTLRNLSDA 254 (644)
T ss_dssp HHHTTHHHHHHTTTTC-S---------CHHHHHHHHHHHHHHGGG
T ss_pred HHHCCCHHHHHHHHhc-C---------CHHHHHHHHHHHHHHhhc
Confidence 9999999988654322 1 134455566665555443
No 10
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=98.66 E-value=5.5e-07 Score=83.47 Aligned_cols=201 Identities=14% Similarity=0.139 Sum_probs=148.3
Q ss_pred hHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHHHHHhhhhccCCchhhhh
Q psy11496 146 YPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCALLVQNLERLDETVKEESD 225 (607)
Q Consensus 146 Yp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~lLv~nL~RldE~~~~e~~ 225 (607)
||-+-..|..+.|+.||.|+|.++...++..|..|+..+ .+ ....+++.+++..|++-|..= +..
T Consensus 5 ~~~~~~~~~~~~l~~LL~s~~~~v~~~a~~~L~~l~~~~-----~~----~~~~i~~~g~i~~L~~lL~~~------~~~ 69 (210)
T 4db6_A 5 HHHHHHGSELPQMVQQLNSPDQQELQSALRKLSQIASGG-----NE----QIQAVIDAGALPALVQLLSSP------NEQ 69 (210)
T ss_dssp --------CHHHHHHHTTCSCHHHHHHHHHHHHHHHTSC-----HH----HHHHHHHTTHHHHHHHHTTCS------CHH
T ss_pred cccccccchhHHHHHHhcCCCHHHHHHHHHHHHHHHcCC-----HH----HHHHHHHcCCHHHHHHHHcCC------CHH
Confidence 777888899999999999999999999999999998542 12 245667778999999888421 234
Q ss_pred hhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHHH
Q psy11496 226 GVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQL 305 (607)
Q Consensus 226 gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~l 305 (607)
-...++..+-||..-.+.....+.+.+.++.|++-++.. ...-+..|.-+|+-|...++..+..+.+.++++.|++.+
T Consensus 70 v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll 147 (210)
T 4db6_A 70 ILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLL 147 (210)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHCCCHHHHHHHHcCC--cHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHH
Confidence 456788899999977888888899889999999999764 234566777788888888888888888888899999888
Q ss_pred hhhhcCCCCChHHHHHHHHHHHHHHhhhCC-HhhHHHhhccchHHHHHHHHhccc-CCcCchhHHHHHh
Q psy11496 306 AYYKRHDPNTPEEQEMMENLFDTLCSCLML-EENKERFLKGEGLQLMNLMLRERK-VSRNGSLKVLDHA 372 (607)
Q Consensus 306 a~yrk~Dp~~~eE~E~~eNlfd~L~slL~~-~~nk~~F~e~eGveLml~mL~~~k-~~r~~AlkvlD~a 372 (607)
.. + ..+...+...+|+.+... ++++..+.+..|++.++.++.... ..+..|..+|..+
T Consensus 148 ~~-----~----~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~~aL~~l 207 (210)
T 4db6_A 148 SS-----P----NEQILQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQEALEKL 207 (210)
T ss_dssp TC-----S----CHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred cC-----C----CHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 63 2 235566677788888864 889999999999999999988532 2233344444433
No 11
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=98.66 E-value=2.7e-06 Score=91.57 Aligned_cols=305 Identities=13% Similarity=0.115 Sum_probs=197.2
Q ss_pred HHHHHHhhcccCC-CchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHHH
Q psy11496 131 TTIQELHAIATVP-DLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCALL 209 (607)
Q Consensus 131 ~~Ik~l~~La~~P-~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~lL 209 (607)
++...|.-||.+. +.-..+++.|+++.|+.||.++|.++...++-.|..|.-.. . ..-+.+++++++..|
T Consensus 139 ~Aa~aL~nia~~~~~~~~~vv~~Gaip~Lv~LL~s~~~~v~e~A~~aL~nLa~~~-----~----~~r~~i~~~g~i~~L 209 (529)
T 3tpo_A 139 ESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGAG-----S----AFRDLVIKHGAIDPL 209 (529)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTC-----H----HHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHhccC-----H----HHHHHHHHcCCcHHH
Confidence 3556777787765 44567899999999999999999999999999999987431 1 224556677888888
Q ss_pred HHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHH
Q psy11496 210 VQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENR 289 (607)
Q Consensus 210 v~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~ 289 (607)
+.-|..-+.. ......+.++...+-|++.-.+.........++++.|++-+... .+.-...|+-.|+-|...++...
T Consensus 210 l~lL~~~~~~-~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~--~~~v~~~a~~aL~~l~~~~~~~~ 286 (529)
T 3tpo_A 210 LALLAVPDLS-TLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHN--DPEVLADSCWAISYLTDGPNERI 286 (529)
T ss_dssp HHTTCSSCGG-GSCHHHHHHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTSS--CHHHHHHHHHHHHHHHSSCHHHH
T ss_pred HHHHhccchh-HhHHHHHHHHHHHHHHHHhcccchhhHHHHhhHHHHHHHHhcCC--cHHHHHHHHHHHHHhhhhhhhhH
Confidence 8877533221 11123445667777888764332222222245777777777643 34556677778888888888888
Q ss_pred HHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC-CHhhHHHhhccchHHHHHHHHhcccC-CcCchhH
Q psy11496 290 KLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM-LEENKERFLKGEGLQLMNLMLRERKV-SRNGSLK 367 (607)
Q Consensus 290 ~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e~eGveLml~mL~~~k~-~r~~Alk 367 (607)
..+...+++..|++.+.. + +.....+...+|++++. .+.++..+....|+..++.+|+..+. .+..|.-
T Consensus 287 ~~v~~~g~i~~Lv~lL~~-----~----~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~ 357 (529)
T 3tpo_A 287 EMVVKKGVVPQLVKLLGA-----T----ELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATW 357 (529)
T ss_dssp HHHHTTTCHHHHHHHHTC-----S----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHH
T ss_pred HHHHhccchHHHHHHhcC-----C----ChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHH
Confidence 888888889888887753 1 23455667778888885 67778889999999999999986542 2444666
Q ss_pred HHHHhhcCCCCchhhhhHHhhhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcCCCchhhHHHHHHHhhcch
Q psy11496 368 VLDHAICGPSGKDNANKFVDILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRNCSGPQRQRLLSKFTENDH 447 (607)
Q Consensus 368 vlD~al~~~~~~~~c~kFVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~l~~~~r~Rll~KFvE~~~ 447 (607)
++-.++.+ .+..+..+++.+++..+..++... ..+.-..++..++.+....... -+..+++..+
T Consensus 358 aL~nl~~~--~~~~~~~v~~~g~i~~Lv~lL~~~----------~~~v~~~A~~aL~nl~~~~~~~----~~~~l~~~g~ 421 (529)
T 3tpo_A 358 TMSNITAG--RQDQIQQVVNHGLVPFLVGVLSKA----------DFKTQKAAAWAITNYTSGGTVE----QIVYLVHCGI 421 (529)
T ss_dssp HHHHHHTS--CHHHHHHHHHTTHHHHHHHHHHSS----------CHHHHHHHHHHHHHHHHHSCHH----HHHHHHHTTC
T ss_pred HHHHHhcc--cHHHHHHHHhcCcHHHHHHHhcCC----------CHHHHHHHHHHHHHHHcCCCHH----HHHHHHHCcC
Confidence 66666653 467788888988888876544321 2334445555555554332222 2233455554
Q ss_pred hhHHHHHHhhh---hhhhhHHHHHHHHHhh
Q psy11496 448 EKVDRLLELHF---KYLSKHVVSIIANMLR 474 (607)
Q Consensus 448 eK~drL~el~~---k~~~Ehvl~IiaSLl~ 474 (607)
-+. |+.+.. .....+++..+..+|+
T Consensus 422 i~~--L~~LL~~~d~~i~~~~L~aL~nil~ 449 (529)
T 3tpo_A 422 IEP--LMNLLSAKDTKIIQVILDAISNIFQ 449 (529)
T ss_dssp HHH--HHHGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHH--HHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 443 454442 2333455555555554
No 12
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=98.65 E-value=4.8e-06 Score=87.14 Aligned_cols=309 Identities=14% Similarity=0.157 Sum_probs=205.2
Q ss_pred HHHHHHHHhhcccCCCchHHHHhc-CChHHHHHhhcc-CCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchH
Q psy11496 129 LHTTIQELHAIATVPDLYPLLVQL-KAVSSMLELVLH-ENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVC 206 (607)
Q Consensus 129 Ld~~Ik~l~~La~~P~LYp~~v~l-~~v~sL~~LLsH-eNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~ 206 (607)
...++..|..|+..++--..++.. |+++.|+.+|.+ ++.++...++..|..|+..+ + ....+++.+++
T Consensus 34 ~~~A~~~L~~l~~~~~~~~~~~~~~~~i~~Lv~~L~~~~~~~~~~~a~~~L~~ls~~~------~----~~~~i~~~g~i 103 (529)
T 1jdh_A 34 VNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHR------E----GLLAIFKSGGI 103 (529)
T ss_dssp HHHHHHHHHHHHTSHHHHHHHHTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTSH------H----HHHHHHHTTHH
T ss_pred HHHHHHHHHHHHcCCccHHHHHhCcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCc------h----hHHHHHHcCCH
Confidence 466788888888887654455554 899999999975 58999999999999987642 2 24555667888
Q ss_pred HHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcCh
Q psy11496 207 ALLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNN 286 (607)
Q Consensus 207 ~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~ 286 (607)
..|++-|.. .+..-.++++.++-||....+.....+.+.+.++.|++-++.. ..+-...+...|+.|...++
T Consensus 104 ~~L~~lL~~------~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~ll~~~--~~~~~~~~~~~L~~la~~~~ 175 (529)
T 1jdh_A 104 PALVKMLGS------PVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKT--NVKFLAITTDCLQILAYGNQ 175 (529)
T ss_dssp HHHHHHTTC------SCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHGGGCC--CHHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHHHcC------CCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHHHhcC--CHHHHHHHHHHHHHHHhCCH
Confidence 889888753 1244667889999999986677777777888999999888753 23334555677888877889
Q ss_pred hHHHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhCCHhhHHHhhccchHHHHHHHHhcccC------
Q psy11496 287 ENRKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLMLEENKERFLKGEGLQLMNLMLRERKV------ 360 (607)
Q Consensus 287 ~~~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~~~~nk~~F~e~eGveLml~mL~~~k~------ 360 (607)
+++..+++.+|++.|++.+... ++ ....+.+..+|..+-..+.++..+.+..|++.++.+++...+
T Consensus 176 ~~~~~i~~~~~i~~L~~ll~~~---~~-----~~~~~~a~~~L~~l~~~~~~~~~~~~~g~~~~L~~ll~~~~~~~~~~a 247 (529)
T 1jdh_A 176 ESKLIILASGGPQALVNIMRTY---TY-----EKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNC 247 (529)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHC---CC-----HHHHHHHHHHHHHHTTSTTHHHHHHHTTHHHHHHTTTTSSCHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHhC---Ch-----HHHHHHHHHHHHHHhcCcccHHHHHHCCCHHHHHHHHhCCChHHHHHH
Confidence 9999999989999999988653 21 223444556666666788899999888888887766654210
Q ss_pred -----------------------------C-----cCchhHHHHHhhcCCCCchhhhhHHhhhchhhhHHhhhcCcccCc
Q psy11496 361 -----------------------------S-----RNGSLKVLDHAICGPSGKDNANKFVDILGLRTIFPLFMKTPKKNR 406 (607)
Q Consensus 361 -----------------------------~-----r~~AlkvlD~al~~~~~~~~c~kFVe~~GLk~lF~lfMkk~kk~k 406 (607)
+ +..|..+|-.++. .+++++..+++.+|+..+..++....
T Consensus 248 ~~~L~~l~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~--~~~~~~~~~~~~~~v~~L~~ll~~~~---- 321 (529)
T 1jdh_A 248 LWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTC--NNYKNKMMVCQVGGIEALVRTVLRAG---- 321 (529)
T ss_dssp HHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTT--TCHHHHHHHHHTTHHHHHHHHHHHHT----
T ss_pred HHHHHHHhcCChhhHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhc--CCHHHHHHHHHcCChHHHHHHHHccC----
Confidence 0 1113444444443 34679999999999999866554311
Q ss_pred CCCcchhhhhHHHHHHHHhhhcCCCchhhHHHHHHHhhcchhhHHHHHHhhhhhhhhHHHHHHHHHhhcCC
Q psy11496 407 RKIITVEEHEEHVVSIKANMLRNCSGPQRQRLLSKFTENDHEKVDRLLELHFKYLSKHVVSIIANMLRNCS 477 (607)
Q Consensus 407 k~~~~~~e~~Eh~~siiaSLlr~l~~~~r~Rll~KFvE~~~eK~drL~el~~k~~~Ehvl~IiaSLl~~l~ 477 (607)
...+..+.++..++.+....+... .....+++..+ +..|+.+-.......+..-.+..+++|.
T Consensus 322 ----~~~~v~~~a~~~L~nl~~~~~~~~--~~~~~i~~~~~--i~~L~~lL~~~~~~~v~~~a~~~l~nl~ 384 (529)
T 1jdh_A 322 ----DREDITEPAICALRHLTSRHQEAE--MAQNAVRLHYG--LPVVVKLLHPPSHWPLIKATVGLIRNLA 384 (529)
T ss_dssp ----TCHHHHHHHHHHHHHHTSSSTTHH--HHHHHHHHTTC--HHHHHHTTSTTCCHHHHHHHHHHHHHHT
T ss_pred ----CHHHHHHHHHHHHHHHHcCCchHH--HHHHHHHHcCC--hhHHHHHhccccchHHHHHHHHHHHHHh
Confidence 114566777888877765543321 11223333333 3335544332222234444455666665
No 13
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=98.64 E-value=1.9e-06 Score=81.91 Aligned_cols=236 Identities=14% Similarity=0.146 Sum_probs=173.1
Q ss_pred hHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHHHHHhhhhccCCchhhhhhhhhhHHHh
Q psy11496 155 VSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCALLVQNLERLDETVKEESDGVHNTLGIF 234 (607)
Q Consensus 155 v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~lLv~nL~RldE~~~~e~~gV~~~L~ii 234 (607)
++.++.+|.++|.++...++..|..+...+ .+. ...+++.+++..|++-|..-+ ..-..+++.++
T Consensus 14 ~~~~~~~L~s~~~~~~~~a~~~L~~~l~~~-----~~~----~~~~~~~g~i~~L~~lL~~~~------~~v~~~a~~~L 78 (252)
T 4db8_A 14 LPQMTQQLNSDDMQEQLSATRKFSQILSDG-----NEQ----IQAVIDAGALPALVQLLSSPN------EQILQEALWAL 78 (252)
T ss_dssp HHHHHHHHHSSCSSHHHHHHHHHHHHHHHH-----HHH----HHHHHHTTHHHHHHHGGGCSC------HHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHcCC-----Cch----HHHHHHcCcHHHHHHHHcCCC------HHHHHHHHHHH
Confidence 456678999999999999999996654431 122 456777899999999885422 34567788889
Q ss_pred hhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHHHhhhhcCCCC
Q psy11496 235 ENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQLAYYKRHDPN 314 (607)
Q Consensus 235 ENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~la~yrk~Dp~ 314 (607)
-|+..-.++....+.+.+.++.|++-++.. ...-+..|..+|+-|....+.....+.+.++++.|++.+.. +
T Consensus 79 ~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~--~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~-----~- 150 (252)
T 4db8_A 79 SNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSS-----P- 150 (252)
T ss_dssp HHHTTSCHHHHHHHHHTTHHHHHHHGGGCS--CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGC-----S-
T ss_pred HHHhcCCHHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhC-----C-
Confidence 999987888899999999999999998863 34556677777888776655554778888899999988842 1
Q ss_pred ChHHHHHHHHHHHHHHhhhC-CHhhHHHhhccchHHHHHHHHhccc-CCcCchhHHHHHhhcCCCCchhhhhHHhhhchh
Q psy11496 315 TPEEQEMMENLFDTLCSCLM-LEENKERFLKGEGLQLMNLMLRERK-VSRNGSLKVLDHAICGPSGKDNANKFVDILGLR 392 (607)
Q Consensus 315 ~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e~eGveLml~mL~~~k-~~r~~AlkvlD~al~~~~~~~~c~kFVe~~GLk 392 (607)
..+...+...+|+.+.. .++++..+.+..++..++.+|+... ..+..|..+|-.+++ ..+.++..+++.+|+.
T Consensus 151 ---~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~--~~~~~~~~~~~~g~i~ 225 (252)
T 4db8_A 151 ---NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIAS--GGNEQKQAVKEAGALE 225 (252)
T ss_dssp ---CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTT--SCHHHHHHHHHTTHHH
T ss_pred ---CHHHHHHHHHHHHHHHcCChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhc--CCHHHHHHHHHCCcHH
Confidence 23556677888888885 6778888999999999999998652 235557777777765 3578899999999998
Q ss_pred hhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhc
Q psy11496 393 TIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLR 428 (607)
Q Consensus 393 ~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr 428 (607)
.+..++.. . ..+.-++++.+++.+.+
T Consensus 226 ~L~~ll~~-~---------~~~v~~~A~~~L~~l~~ 251 (252)
T 4db8_A 226 KLEQLQSH-E---------NEKIQKEAQEALEKLQS 251 (252)
T ss_dssp HHHTTTTC-S---------SSHHHHTHHHHHHTTC-
T ss_pred HHHHHhCC-C---------CHHHHHHHHHHHHHHhc
Confidence 88553332 1 23555677777765543
No 14
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.64 E-value=1.4e-06 Score=93.76 Aligned_cols=307 Identities=13% Similarity=0.113 Sum_probs=198.6
Q ss_pred HHHHHHhhcccC-CCchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHHH
Q psy11496 131 TTIQELHAIATV-PDLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCALL 209 (607)
Q Consensus 131 ~~Ik~l~~La~~-P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~lL 209 (607)
++...|.-||.. |+.=..+|+.|+++.|+.||.++|.++...++-.|..|.-.. ...-+.+++++++..|
T Consensus 120 ~Aa~aL~nias~~~e~~~~vv~~GaIp~Lv~lL~s~~~~v~e~A~~aL~nLa~d~---------~~~r~~v~~~G~i~~L 190 (510)
T 3ul1_B 120 ESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDG---------SAFRDLVIKHGAIDPL 190 (510)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTC---------HHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCC---------HHHHHHHHHcCChHHH
Confidence 456677777664 566678899999999999999999999999999999987421 1234556778889999
Q ss_pred HHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHH
Q psy11496 210 VQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENR 289 (607)
Q Consensus 210 v~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~ 289 (607)
+.-|..-+.. ......+.++...+-|+..-...........++++.|.+-++.. .+.-..+|+..|+-|...++...
T Consensus 191 l~lL~~~~~~-~~~~~~~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~--~~~v~~~A~~aL~~L~~~~~~~~ 267 (510)
T 3ul1_B 191 LALLAVPDLS-TLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHN--DPEVLADSCWAISYLTDGPNERI 267 (510)
T ss_dssp HHHTCSSCGG-GSCHHHHHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCS--CHHHHHHHHHHHHHHTSSCHHHH
T ss_pred HHHHHhccch-hhhHHHHHHHHHHHHHHhhcccchhHHHHHHhHHHHHHHHHhcC--CHHHHHHHHHHHHHHhhchhhhH
Confidence 8888543321 11223455677778888764322222222345777777777643 34566677788888888777777
Q ss_pred HHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC-CHhhHHHhhccchHHHHHHHHhcccC-CcCchhH
Q psy11496 290 KLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM-LEENKERFLKGEGLQLMNLMLRERKV-SRNGSLK 367 (607)
Q Consensus 290 ~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e~eGveLml~mL~~~k~-~r~~Alk 367 (607)
..+...+++..|++.+.. + +.....+...+|+++.. .+.++..+.+..++..+..+|+..+. .+..|..
T Consensus 268 ~~i~~~g~i~~Lv~lL~~-----~----~~~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~v~~~A~~ 338 (510)
T 3ul1_B 268 EMVVKKGVVPQLVKLLGA-----T----ELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATW 338 (510)
T ss_dssp HHHHTTTCHHHHHHHHTC-----S----CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-CTTCSSHHHHHHHHH
T ss_pred HHHHhcccchhhhhhhcC-----C----ChhhhhHHHHHHHHhhcCCHHHHHHHhhccchHHHHHHhcCCCHHHHHHHHH
Confidence 777777888888887753 1 23455667778888874 66778888888888888888876432 2444666
Q ss_pred HHHHhhcCCCCchhhhhHHhhhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcCCCchhhHHHHHHHhhcch
Q psy11496 368 VLDHAICGPSGKDNANKFVDILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRNCSGPQRQRLLSKFTENDH 447 (607)
Q Consensus 368 vlD~al~~~~~~~~c~kFVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~l~~~~r~Rll~KFvE~~~ 447 (607)
++-.++.+ .+..+..+++.+++..+..++-.. ..+.-..++..++.+....... -+..+++...
T Consensus 339 aL~nl~a~--~~~~~~~v~~~g~i~~Lv~lL~~~----------~~~v~~~Aa~aL~Nl~~~~~~~----~~~~L~~~g~ 402 (510)
T 3ul1_B 339 TMSNITAG--RQDQIQQVVNHGLVPFLVGVLSKA----------DFKTQKEAAWAITNYTSGGTVE----QIVYLVHCGI 402 (510)
T ss_dssp HHHHHTTS--CHHHHHHHHHTTHHHHHHHHHHSS----------CHHHHHHHHHHHHHHHHHCCHH----HHHHHHHTTC
T ss_pred HHHHHHcC--cHHHHHHHHhcCCHHHHHHHHcCC----------CHHHHHHHHHHHHHHHccCCHH----HHHHHHHCCC
Confidence 66666543 466777888888888876544322 2333445555555554433222 2334555554
Q ss_pred hhHHHHHHhhh---hhhhhHHHHHHHHHhhcC
Q psy11496 448 EKVDRLLELHF---KYLSKHVVSIIANMLRNC 476 (607)
Q Consensus 448 eK~drL~el~~---k~~~Ehvl~IiaSLl~~l 476 (607)
-+. |..+.. .....+++..+..+|+.-
T Consensus 403 i~~--L~~LL~~~d~~i~~~~L~aL~nil~~~ 432 (510)
T 3ul1_B 403 IEP--LMNLLSAKDTKIIQVILDAISNIFQAA 432 (510)
T ss_dssp HHH--HHHGGGCSCHHHHHHHHHHHHHHHHHH
T ss_pred HHH--HHHHhcCCCHHHHHHHHHHHHHHHHHh
Confidence 443 554442 233455666666666543
No 15
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.61 E-value=6.4e-06 Score=84.18 Aligned_cols=314 Identities=13% Similarity=0.105 Sum_probs=195.9
Q ss_pred HHHHHHHhhcccC-CCchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhcccccccc----chhhHHHHHHHHHh--
Q psy11496 130 HTTIQELHAIATV-PDLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNE----SEEGTESLLTALLD-- 202 (607)
Q Consensus 130 d~~Ik~l~~La~~-P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e----~~e~~~~lv~aL~e-- 202 (607)
..+...|..++.. |+.-..+++.|+++.|+.+|.++|.++...++..|..+........ .......|+..|-+
T Consensus 83 ~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~~l~~~~ 162 (450)
T 2jdq_A 83 FESAWVLTNIASGNSLQTRIVIQAGAVPIFIELLSSEFEDVQEQAVWALGNIAGDSTMCRDYVLDCNILPPLLQLFSKQN 162 (450)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHhCCCHHHHHHHHcCCCHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCC
Confidence 3456666666664 5666678889999999999999999999999999988876431000 00111222222211
Q ss_pred ----------------------------cchHHHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhH
Q psy11496 203 ----------------------------QQVCALLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGII 254 (607)
Q Consensus 203 ----------------------------~~l~~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL 254 (607)
.+++..|++-|. ..+..-..++...+-||....++....++..+++
T Consensus 163 ~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~~l~------~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i 236 (450)
T 2jdq_A 163 RLTMTRNAVWALSNLCRGKSPPPEFAKVSPCLNVLSWLLF------VSDTDVLADACWALSYLSDGPNDKIQAVIDAGVC 236 (450)
T ss_dssp CHHHHHHHHHHHHHHHCCSSSCCCGGGTGGGHHHHHHHTT------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHTTTH
T ss_pred CHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHc------cCCHHHHHHHHHHHHHHHCCCcHHHHHHHHcCcH
Confidence 122233333221 1122344566777778887666667777777889
Q ss_pred HHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC
Q psy11496 255 QWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM 334 (607)
Q Consensus 255 ~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~ 334 (607)
+.|++-+... ...-+..|...|+-|...++..+..+.+.++++.|++.+.. |. ...-....-+|+.+..
T Consensus 237 ~~L~~ll~~~--~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~-----~~----~~vr~~a~~~L~~l~~ 305 (450)
T 2jdq_A 237 RRLVELLMHN--DYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSS-----PK----ESIKKEACWTISNITA 305 (450)
T ss_dssp HHHHHHTTCS--CHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTC-----SS----HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCC--chhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHcC-----CC----HHHHHHHHHHHHHHHc
Confidence 9999888742 33445667778888888878777777777788888887753 21 2344456677777774
Q ss_pred -CHhhHHHhhccchHHHHHHHHhccc-CCcCchhHHHHHhhcCCCCchhhhhHHhhhchhhhHHhhhcCcccCcCCCcch
Q psy11496 335 -LEENKERFLKGEGLQLMNLMLRERK-VSRNGSLKVLDHAICGPSGKDNANKFVDILGLRTIFPLFMKTPKKNRRKIITV 412 (607)
Q Consensus 335 -~~~nk~~F~e~eGveLml~mL~~~k-~~r~~AlkvlD~al~~~~~~~~c~kFVe~~GLk~lF~lfMkk~kk~kk~~~~~ 412 (607)
.+.+...+.+..++..++.+|+... ..+..|..++-.++.+. .++.+..+++..++..++.++-.. .
T Consensus 306 ~~~~~~~~~~~~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~-~~~~~~~l~~~~~i~~L~~ll~~~----------~ 374 (450)
T 2jdq_A 306 GNRAQIQTVIDANIFPALISILQTAEFRTRKEAAWAITNATSGG-SAEQIKYLVELGCIKPLCDLLTVM----------D 374 (450)
T ss_dssp SCHHHHHHHHHTTHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHTCHHHHHHGGGSS----------C
T ss_pred CCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCC-CHHHHHHHHHCCCHHHHHHHhcCC----------C
Confidence 6777888888889999999998643 23445666776666531 467788899988999886644321 2
Q ss_pred hhhhHHHHHHHHhhhcCCCchh------hHHHHHHHhhcchhhHHHHHHhh---hhhhhhHHHHHHHHHh
Q psy11496 413 EEHEEHVVSIKANMLRNCSGPQ------RQRLLSKFTENDHEKVDRLLELH---FKYLSKHVVSIIANML 473 (607)
Q Consensus 413 ~e~~Eh~~siiaSLlr~l~~~~------r~Rll~KFvE~~~eK~drL~el~---~k~~~Ehvl~IiaSLl 473 (607)
.+.-++++..+..++...+... ...++..|.+.++. ++|..+- .....++.++++..+|
T Consensus 375 ~~v~~~a~~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~--~~l~~l~~~~~~~v~~~a~~~l~~~~ 442 (450)
T 2jdq_A 375 SKIVQVALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGL--DKIEFLQSHENQEIYQKAFDLIEHYF 442 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCSCCCHHHHHHHHHHCH--HHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhchhhhhccccchhHHHHHHHHcCcH--HHHHHHHcCCCHHHHHHHHHHHHHHC
Confidence 4566777777777765433211 12456666655532 2244332 2233345556665555
No 16
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.56 E-value=5.6e-06 Score=87.87 Aligned_cols=264 Identities=10% Similarity=0.081 Sum_probs=191.1
Q ss_pred HHHHHHHhhcccC-CCchHHHHhcCChHHHHHhh-ccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHH
Q psy11496 130 HTTIQELHAIATV-PDLYPLLVQLKAVSSMLELV-LHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCA 207 (607)
Q Consensus 130 d~~Ik~l~~La~~-P~LYp~~v~l~~v~sL~~LL-sHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~ 207 (607)
..++..|..|+.. |..-..++..|+++.|+.+| .|++.++...++..|..|+...... .. . +..+++.
T Consensus 178 ~~a~~aL~~l~~~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~v~~~a~~~L~~L~~~~~~~----~~-~-----~~~~~l~ 247 (528)
T 4b8j_A 178 EQAVWALGNVAGDSPKCRDLVLANGALLPLLAQLNEHTKLSMLRNATWTLSNFCRGKPQP----SF-E-----QTRPALP 247 (528)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTTCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCSSSCC----CH-H-----HHTTHHH
T ss_pred HHHHHHHHHHhCCChhhHHHHHHCCcHHHHHHHHhcCCCHHHHHHHHHHHHHHHcCCCCC----cH-H-----HHHHHHH
Confidence 3455666677765 55677788899999999999 7899999999999999998764111 11 1 1256777
Q ss_pred HHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChh
Q psy11496 208 LLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNE 287 (607)
Q Consensus 208 lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~ 287 (607)
.|++-|.. .+..-..+++..+-||....+.....+...++++.|+.-+... ...-+..|..+|+-|...++.
T Consensus 248 ~L~~lL~~------~~~~v~~~a~~aL~~l~~~~~~~~~~~~~~g~v~~Lv~lL~~~--~~~v~~~a~~~L~nl~~~~~~ 319 (528)
T 4b8j_A 248 ALARLIHS------NDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCPRLVELLLHP--SPSVLIPALRTVGNIVTGDDA 319 (528)
T ss_dssp HHHHHTTC------CCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTCHHHHHHHTTCS--CHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHCC------CCHHHHHHHHHHHHHHHcCCHHHHHHHHHcCHHHHHHHHHcCC--ChhHHHHHHHHHHHHHcCCHH
Confidence 77776631 2445677889999999987777777888888999999999864 345567777888888888888
Q ss_pred HHHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC-CHhhHHHhhccchHHHHHHHHhccc-CCcCch
Q psy11496 288 NRKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM-LEENKERFLKGEGLQLMNLMLRERK-VSRNGS 365 (607)
Q Consensus 288 ~~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e~eGveLml~mL~~~k-~~r~~A 365 (607)
.+..+.+.+++..|++.+.. +.. .....+..-+|+++.. .++....+....++..++.+|.... ..+..|
T Consensus 320 ~~~~~~~~~~l~~L~~lL~~-----~~~---~~v~~~A~~~L~nl~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a 391 (528)
T 4b8j_A 320 QTQCIIDHQALPCLLSLLTQ-----NLK---KSIKKEACWTISNITAGNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEA 391 (528)
T ss_dssp HHHHHHTTTHHHHHHHHHHS-----CCC---HHHHHHHHHHHHHHHTSCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHhhhHHHHHHHHcC-----CCc---HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHH
Confidence 88888888889999988863 212 2233344556677664 6667788888899999999998653 335557
Q ss_pred hHHHHHhhcCCCCchhhhhHHhhhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcCC
Q psy11496 366 LKVLDHAICGPSGKDNANKFVDILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRNC 430 (607)
Q Consensus 366 lkvlD~al~~~~~~~~c~kFVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~l 430 (607)
..+|-.++.+ .+++.+..+++..++..+..++-.. ..+...+++.++..+++..
T Consensus 392 ~~aL~nl~~~-~~~~~~~~l~~~~~i~~L~~lL~~~----------d~~v~~~al~~L~~l~~~~ 445 (528)
T 4b8j_A 392 AWAISNATSG-GSHDQIKYLVSEGCIKPLCDLLICP----------DIRIVTVCLEGLENILKVG 445 (528)
T ss_dssp HHHHHHHHHH-SCHHHHHHHHHTTCHHHHHHGGGCS----------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcC-CCHHHHHHHHHCCCHHHHHHHHcCC----------CHHHHHHHHHHHHHHHHHH
Confidence 7777777663 2478899999999999986654321 2456677777777776543
No 17
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=98.53 E-value=2.8e-06 Score=88.82 Aligned_cols=274 Identities=13% Similarity=0.082 Sum_probs=182.0
Q ss_pred HhHHHHHHHHhhcccCCCchHHHHhcCChHHHHHhhc-----------cCCchhHHHHHHHhhhhccccccccchhhHHH
Q psy11496 127 IELHTTIQELHAIATVPDLYPLLVQLKAVSSMLELVL-----------HENTDIAVAVVDLLQELTDVDVLNESEEGTES 195 (607)
Q Consensus 127 ~dLd~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLs-----------HeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~ 195 (607)
-.+-.++..|.-||..|+.=..+++.|+++.|+.||. |.|.++-..+...|.-|+-.+ +....
T Consensus 47 ~~~~~A~~aL~nls~d~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~~q~~Aa~aL~nLa~~~------~~~k~ 120 (354)
T 3nmw_A 47 HQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGD------VANKA 120 (354)
T ss_dssp GTHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHTSSC------HHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHhcccccccccCCCCCHHHHHHHHHHHHHHHcCC------HHHHH
Confidence 4456789999999999998889999999999999994 456778888888888887432 11222
Q ss_pred HHHHHHhcchHHHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcC-ChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhH
Q psy11496 196 LLTALLDQQVCALLVQNLERLDETVKEESDGVHNTLGIFENLCEL-KPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYT 274 (607)
Q Consensus 196 lv~aL~e~~l~~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~-~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~Ya 274 (607)
.|- ...+++..||+-|.. .+.+-..++.+.+-||... ++.....+++.+.++-|++-+.... ...-...|
T Consensus 121 ~i~--~~~GaIp~LV~LL~s------~~~~v~~~A~~aL~nLs~~~~~~~k~~i~~~G~Ip~Lv~lL~~~~-~~~~~~~A 191 (354)
T 3nmw_A 121 TLC--SMKGCMRALVAQLKS------ESEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVK-KESTLKSV 191 (354)
T ss_dssp HHH--HCHHHHHHHHHGGGC------SCHHHHHHHHHHHHHHHTTCCHHHHHHHHHTTHHHHHHHHHHHCC-CHHHHHHH
T ss_pred HHH--HcCCcHHHHHHHHCC------CCHHHHHHHHHHHHHHhccCCHHHHHHHHHCCCHHHHHHHHhcCC-CHHHHHHH
Confidence 221 134567888888852 1223345667777788753 4566677888788888887754321 22223334
Q ss_pred HHHHHHHhhcChhHHHHhh-ccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhh----CCHhhHHHhhccchHH
Q psy11496 275 SEILSILCQKNNENRKLLG-DLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCL----MLEENKERFLKGEGLQ 349 (607)
Q Consensus 275 sEiL~Illq~~~~~~~~l~-~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL----~~~~nk~~F~e~eGve 349 (607)
.-.|.-|-..++.++..++ ..++|..|++.|.. +......+..++..-+|.++- ..+++|..+.+..|+.
T Consensus 192 ~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~-----~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~g~i~ 266 (354)
T 3nmw_A 192 LSALWNLSAHCTENKADICAVDGALAFLVGTLTY-----RSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQ 266 (354)
T ss_dssp HHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTC-----CCSSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHH
T ss_pred HHHHHHHHccChhhhHHHHHhcCcHHHHHHHhcc-----CCCcccHHHHHHHHHHHHHHHhhccCCHHHHHHHHHcCCHH
Confidence 4445555444788888888 67789999988853 111111133444444444443 4889999999999999
Q ss_pred HHHHHHhccc-CCcCchhHHHHHhhcCCCCchhhhhHHhhhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhc
Q psy11496 350 LMNLMLRERK-VSRNGSLKVLDHAICGPSGKDNANKFVDILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLR 428 (607)
Q Consensus 350 Lml~mL~~~k-~~r~~AlkvlD~al~~~~~~~~c~kFVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr 428 (607)
.++.+|+... ..+..|..++-.++. ..++++..+++.+|+..+.. ++... ..+.-++++..+..|+.
T Consensus 267 ~Lv~lL~~~~~~v~~~A~~aL~nLa~--~~~~~~~~i~~~G~i~~Lv~-LL~s~---------~~~i~~~A~~aL~nL~~ 334 (354)
T 3nmw_A 267 TLLQHLKSHSLTIVSNACGTLWNLSA--RNPKDQEALWDMGAVSMLKN-LIHSK---------HKMIAMGSAAALRNLMA 334 (354)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHTS--SCHHHHHHHHHTTHHHHHHT-TTTCS---------SHHHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCChHHHHHHHHHHHHHhC--CCHHHHHHHHHCCCHHHHHH-HHhCC---------CHHHHHHHHHHHHHHHc
Confidence 9999998643 234446666665554 25788999999999998744 33321 24556778888888877
Q ss_pred CCCc
Q psy11496 429 NCSG 432 (607)
Q Consensus 429 ~l~~ 432 (607)
+-+.
T Consensus 335 ~~~~ 338 (354)
T 3nmw_A 335 NRPA 338 (354)
T ss_dssp TCCG
T ss_pred CCHH
Confidence 7554
No 18
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=98.44 E-value=5.2e-06 Score=84.80 Aligned_cols=262 Identities=15% Similarity=0.062 Sum_probs=182.7
Q ss_pred HHHHHHHhhcccC--CCchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHH
Q psy11496 130 HTTIQELHAIATV--PDLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCA 207 (607)
Q Consensus 130 d~~Ik~l~~La~~--P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~ 207 (607)
..++..|..|+.. |..-..++ .|+++.|+.+|.|++.++...++..|..|++... .....+++.+++.
T Consensus 168 ~~a~~~L~~l~~~~~~~~~~~~~-~~~l~~L~~~l~~~~~~v~~~a~~~L~~l~~~~~---------~~~~~~~~~~~i~ 237 (450)
T 2jdq_A 168 RNAVWALSNLCRGKSPPPEFAKV-SPCLNVLSWLLFVSDTDVLADACWALSYLSDGPN---------DKIQAVIDAGVCR 237 (450)
T ss_dssp HHHHHHHHHHHCCSSSCCCGGGT-GGGHHHHHHHTTCCCHHHHHHHHHHHHHHTSSSH---------HHHHHHHHTTTHH
T ss_pred HHHHHHHHHHhCCCCCCCCHHHH-HHHHHHHHHHHccCCHHHHHHHHHHHHHHHCCCc---------HHHHHHHHcCcHH
Confidence 3456667777755 43322223 7899999999999999999999999999987421 1235566778888
Q ss_pred HHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChh
Q psy11496 208 LLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNE 287 (607)
Q Consensus 208 lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~ 287 (607)
.|++-|. + .+..-...++..+-||..-.+.....+...++++.+++-++.. ...-+..|.-.|+-|...++.
T Consensus 238 ~L~~ll~--~----~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~l~~L~~ll~~~--~~~vr~~a~~~L~~l~~~~~~ 309 (450)
T 2jdq_A 238 RLVELLM--H----NDYKVVSPALRAVGNIVTGDDIQTQVILNCSALQSLLHLLSSP--KESIKKEACWTISNITAGNRA 309 (450)
T ss_dssp HHHHHTT--C----SCHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHTTCS--SHHHHHHHHHHHHHHTTSCHH
T ss_pred HHHHHHC--C----CchhHHHHHHHHHHHHhhCChHHHHHHHHCccHHHHHHHHcCC--CHHHHHHHHHHHHHHHcCCHH
Confidence 8888774 1 2335567788888999987777777788888999999988753 234455566677777777788
Q ss_pred HHHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC--CHhhHHHhhccchHHHHHHHHhccc-CCcCc
Q psy11496 288 NRKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM--LEENKERFLKGEGLQLMNLMLRERK-VSRNG 364 (607)
Q Consensus 288 ~~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~--~~~nk~~F~e~eGveLml~mL~~~k-~~r~~ 364 (607)
....+.+.+++..|++.+.. .+ .+.-.+..-+|+.+.. .+++...+.+..++..++.++.... ..+..
T Consensus 310 ~~~~~~~~~~l~~L~~~l~~---~~------~~v~~~a~~~L~~l~~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~ 380 (450)
T 2jdq_A 310 QIQTVIDANIFPALISILQT---AE------FRTRKEAAWAITNATSGGSAEQIKYLVELGCIKPLCDLLTVMDSKIVQV 380 (450)
T ss_dssp HHHHHHHTTHHHHHHHHHHH---SC------HHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCHHHHHHGGGSSCHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHhc---CC------HHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHH
Confidence 87777777889999988863 11 2344455666777764 6777788888889999999998642 22344
Q ss_pred hhHHHHHhhcCCC---------CchhhhhHHhhhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhc
Q psy11496 365 SLKVLDHAICGPS---------GKDNANKFVDILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLR 428 (607)
Q Consensus 365 AlkvlD~al~~~~---------~~~~c~kFVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr 428 (607)
|...|..++.... -...|..|.+.+|++.++.+ +. . +..+.-+++++++..++.
T Consensus 381 a~~aL~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~~l-~~-~--------~~~~v~~~a~~~l~~~~~ 443 (450)
T 2jdq_A 381 ALNGLENILRLGEQEAKRNGTGINPYCALIEEAYGLDKIEFL-QS-H--------ENQEIYQKAFDLIEHYFG 443 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHSCSCCCHHHHHHHHHHCHHHHHHH-HC-H--------HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhchhhhhccccchhHHHHHHHHcCcHHHHHHH-Hc-C--------CCHHHHHHHHHHHHHHCC
Confidence 5555555543211 13468889999999998653 22 1 235677788888876663
No 19
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=98.40 E-value=1.2e-05 Score=85.38 Aligned_cols=243 Identities=13% Similarity=0.055 Sum_probs=176.3
Q ss_pred HHHHHHHHhhcccCCCchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHH
Q psy11496 129 LHTTIQELHAIATVPDLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCAL 208 (607)
Q Consensus 129 Ld~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~l 208 (607)
....+..|..|+.....-+..+..|+++.|+.+|.|++.++...++..|..|++.. . ..+..+++.+++..
T Consensus 220 ~~~a~~~L~~L~~~~~~~~~~~~~~~l~~L~~lL~~~~~~v~~~a~~aL~~l~~~~-----~----~~~~~~~~~g~v~~ 290 (528)
T 4b8j_A 220 LRNATWTLSNFCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGT-----N----DKIQAVIEAGVCPR 290 (528)
T ss_dssp HHHHHHHHHHHHCSSSCCCHHHHTTHHHHHHHHTTCCCHHHHHHHHHHHHHHTSSC-----H----HHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHcCC-----H----HHHHHHHHcCHHHH
Confidence 44555666667666322233445899999999999999999999999999999642 1 22456667789999
Q ss_pred HHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhH
Q psy11496 209 LVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNEN 288 (607)
Q Consensus 209 Lv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~ 288 (607)
|++-|..= +..-...++.++-||....+.....+.+.++++.|++-++.. ....-+..|.-+|+-|...++..
T Consensus 291 Lv~lL~~~------~~~v~~~a~~~L~nl~~~~~~~~~~~~~~~~l~~L~~lL~~~-~~~~v~~~A~~~L~nl~~~~~~~ 363 (528)
T 4b8j_A 291 LVELLLHP------SPSVLIPALRTVGNIVTGDDAQTQCIIDHQALPCLLSLLTQN-LKKSIKKEACWTISNITAGNKDQ 363 (528)
T ss_dssp HHHHTTCS------CHHHHHHHHHHHHHHTTSCHHHHHHHHTTTHHHHHHHHHHSC-CCHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHHcCC------ChhHHHHHHHHHHHHHcCCHHHHHHHHHhhhHHHHHHHHcCC-CcHHHHHHHHHHHHHHHCCCHHH
Confidence 99888432 234567789999999987888888888888999999998853 13345666777888888778888
Q ss_pred HHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC--CHhhHHHhhccchHHHHHHHHhccc-CCcCch
Q psy11496 289 RKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM--LEENKERFLKGEGLQLMNLMLRERK-VSRNGS 365 (607)
Q Consensus 289 ~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~--~~~nk~~F~e~eGveLml~mL~~~k-~~r~~A 365 (607)
...+...+++..|++.+.. . ..+...+...+|+.+.. .++++..+.+..++..++.+|.... ..+..|
T Consensus 364 ~~~~~~~~~i~~L~~lL~~---~------~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~i~~L~~lL~~~d~~v~~~a 434 (528)
T 4b8j_A 364 IQAVINAGIIGPLVNLLQT---A------EFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLICPDIRIVTVC 434 (528)
T ss_dssp HHHHHHTTCHHHHHHHHHH---S------CHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhc---C------CHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHH
Confidence 8788888889999998864 1 23445566677777774 5888899999999999999998743 223445
Q ss_pred hHHHHHhhcCC---------CCchhhhhHHhhhchhhhHH
Q psy11496 366 LKVLDHAICGP---------SGKDNANKFVDILGLRTIFP 396 (607)
Q Consensus 366 lkvlD~al~~~---------~~~~~c~kFVe~~GLk~lF~ 396 (607)
+.+|..++... .....|..|.+.+|++.+..
T Consensus 435 l~~L~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~l~~ 474 (528)
T 4b8j_A 435 LEGLENILKVGETDKTLAAGDVNVFSQMIDEAEGLEKIEN 474 (528)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcccccccHHHHHHHHCCcHHHHHH
Confidence 66666555421 12246888899999988744
No 20
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=98.36 E-value=1.1e-05 Score=74.78 Aligned_cols=161 Identities=16% Similarity=0.183 Sum_probs=130.8
Q ss_pred HHHHHHHHhhcc-cCCCchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHH
Q psy11496 129 LHTTIQELHAIA-TVPDLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCA 207 (607)
Q Consensus 129 Ld~~Ik~l~~La-~~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~ 207 (607)
...+...|..|+ ..|+....+++.|+++.|+.+|.|+|.++...++..|..++..+ + .....+++.+++.
T Consensus 29 ~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~-----~----~~~~~i~~~g~i~ 99 (210)
T 4db6_A 29 LQSALRKLSQIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGG-----N----EQIQAVIDAGALP 99 (210)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSC-----H----HHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCC-----c----HHHHHHHHCCCHH
Confidence 346677888888 45677889999999999999999999999999999999998432 1 1245566778999
Q ss_pred HHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChh
Q psy11496 208 LLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNE 287 (607)
Q Consensus 208 lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~ 287 (607)
.|++-|..= +..-..++..++-||..-.+.....+.+.+.++.|++-++.. ...-+.+|...|+-|...++.
T Consensus 100 ~L~~lL~~~------~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~--~~~v~~~a~~aL~~l~~~~~~ 171 (210)
T 4db6_A 100 ALVQLLSSP------NEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSP--NEQILQEALWALSNIASGGNE 171 (210)
T ss_dssp HHHHHTTCS------CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHTSCHH
T ss_pred HHHHHHcCC------cHHHHHHHHHHHHHHHcCCHHHHHHHHHcCcHHHHHHHHcCC--CHHHHHHHHHHHHHHHcCCcH
Confidence 999888432 355677889999999987888888888889999999999863 345567777889999998899
Q ss_pred HHHHhhccccHHHHHHHHh
Q psy11496 288 NRKLLGDLDGIDILLQQLA 306 (607)
Q Consensus 288 ~~~~l~~~dgid~LL~~la 306 (607)
++..+.+.++++.|++.+.
T Consensus 172 ~~~~~~~~g~i~~L~~ll~ 190 (210)
T 4db6_A 172 QKQAVKEAGALEKLEQLQS 190 (210)
T ss_dssp HHHHHHHTTHHHHHHHGGG
T ss_pred HHHHHHHCCCHHHHHHHHh
Confidence 9999988888999988775
No 21
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.35 E-value=1.7e-05 Score=90.10 Aligned_cols=220 Identities=15% Similarity=0.168 Sum_probs=161.3
Q ss_pred HHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHh-cchHHHHHHhhhhccCCchhhhhhh
Q psy11496 149 LVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLD-QQVCALLVQNLERLDETVKEESDGV 227 (607)
Q Consensus 149 ~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e-~~l~~lLv~nL~RldE~~~~e~~gV 227 (607)
.+..|+++.|+.||.|+|..+-..++..|..|...+. . ...+++ .+++..||+.|..= ++....
T Consensus 146 ~i~~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~~------~----~~~i~~~~~~i~~Lv~~L~~~-----~d~~vr 210 (780)
T 2z6g_A 146 ELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEA------S----RHAIMRSPQMVSAIVRTMQNT-----NDVETA 210 (780)
T ss_dssp HHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSHH------H----HHHHTTCHHHHHHHHHHHHHC-----CCHHHH
T ss_pred HHHhCCHHHHHHHHCCCCHHHHHHHHHHHHHHhCCCh------h----HHHHHhccChHHHHHHHHcCC-----CCHHHH
Confidence 4458999999999999999999999999999976421 1 112332 25677777777421 134455
Q ss_pred hhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHHHhh
Q psy11496 228 HNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQLAY 307 (607)
Q Consensus 228 ~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~la~ 307 (607)
.++...+-||.. .++....+++.+.++.|++-++.. ...-+.+|...|.-|....+..+..+.+.+++..|+..+..
T Consensus 211 ~~Aa~aL~~Ls~-~~~~~~~i~~~g~I~~Lv~lL~~~--~~~v~~~A~~aL~nLa~~~~~~~~~v~~~g~v~~Lv~lL~~ 287 (780)
T 2z6g_A 211 RCTSGTLHNLSH-HREGLLAIFKSGGIPALVNMLGSP--VDSVLFHAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNK 287 (780)
T ss_dssp HHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHHTTCS--CHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHGGGC
T ss_pred HHHHHHHHHHhC-CchhHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHhCCChhhHHHHHHcCCHHHHHHHHhc
Confidence 677777888654 667677788888999999999864 35567788888999988888888888888889999988864
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHhhhC-CHhhHHHhhccchHHHHHHHHhcccCC--cCchhHHHHHhhcCCCCchhhhh
Q psy11496 308 YKRHDPNTPEEQEMMENLFDTLCSCLM-LEENKERFLKGEGLQLMNLMLRERKVS--RNGSLKVLDHAICGPSGKDNANK 384 (607)
Q Consensus 308 yrk~Dp~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e~eGveLml~mL~~~k~~--r~~AlkvlD~al~~~~~~~~c~k 384 (607)
+ ..+..+.+.++|+.+.. .+++|..+.+..|++.++.+|+..... ...|..++-.++. ++.++..
T Consensus 288 -----~----~~~v~~~a~~aL~~La~~~~e~~~~i~~~~~i~~Lv~lL~~~~~~~~~~~a~~aL~~Ls~---~~~~~~~ 355 (780)
T 2z6g_A 288 -----T----NVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSV---CSSNKPA 355 (780)
T ss_dssp -----C----CHHHHHHHHHHHHHHHTTCHHHHHHHHTTTHHHHHHHHHTTCCCHHHHHHHHHHHHHHHT---STTHHHH
T ss_pred -----C----CHHHHHHHHHHHHHHhcCChHHHHHHHHcCCHHHHHHHHhcCCHHHHHHHHHHHHHHhhc---ChHHHHH
Confidence 1 12344556667776553 689999999999999999999865322 2234566666554 4678999
Q ss_pred HHhhhchhhhHHhh
Q psy11496 385 FVDILGLRTIFPLF 398 (607)
Q Consensus 385 FVe~~GLk~lF~lf 398 (607)
+++.+|+..+..++
T Consensus 356 i~~~g~l~~Ll~lL 369 (780)
T 2z6g_A 356 IVEAGGMQALGLHL 369 (780)
T ss_dssp HHHTTHHHHHGGGT
T ss_pred HHHhchHHHHHHHH
Confidence 99999999886544
No 22
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=98.32 E-value=1.5e-05 Score=86.29 Aligned_cols=269 Identities=13% Similarity=0.077 Sum_probs=177.5
Q ss_pred HHHHHHhhcccCCCchHHHHhcCChHHHHHhhc-----------cCCchhHHHHHHHhhhhccccccccchhhHHHHHHH
Q psy11496 131 TTIQELHAIATVPDLYPLLVQLKAVSSMLELVL-----------HENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTA 199 (607)
Q Consensus 131 ~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLs-----------HeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~a 199 (607)
.++..|.-+|.+|+.=..+++.|+++.|+.||. |.|..+...+.-.|.-|+-.+ +.....+..
T Consensus 167 qAv~aL~nls~~~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~~~~~~~~l~~~Aa~aL~nLa~~~------~~~k~~i~~ 240 (458)
T 3nmz_A 167 PAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLTNDHYSITLRRYAGMALTNLTFGD------VANKATLCS 240 (458)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHTTC------HHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhhhhcccccccCCCCHHHHHHHHHHHHHHhCCC------cccHHHHHH
Confidence 678888889999998889999999999999994 356667777888888887432 112222211
Q ss_pred HHhcchHHHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcC-ChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHH
Q psy11496 200 LLDQQVCALLVQNLERLDETVKEESDGVHNTLGIFENLCEL-KPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEIL 278 (607)
Q Consensus 200 L~e~~l~~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~-~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL 278 (607)
.++++..||+-|..= +.+-..++.+.+-||..- ++..-..+++.+.++.|++-+.... ...-...|.-.|
T Consensus 241 --~~GaIp~LV~LL~s~------~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~GaI~~LV~lLl~s~-~~~v~~~A~~aL 311 (458)
T 3nmz_A 241 --MKGCMRALVAQLKSE------SEDLQQVIASVLRNLSWRADVNSKKTLREVGSVKALMECALEVK-KESTLKSVLSAL 311 (458)
T ss_dssp --CHHHHHHHHHGGGCS------CHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTHHHHHHHHHTTCC-SHHHHHHHHHHH
T ss_pred --cCCcHHHHHHHHhCC------CHHHHHHHHHHHHHHhcCCCHHHHHHHHHcCCHHHHHHHHhcCC-CHHHHHHHHHHH
Confidence 345678888887521 223344566777777653 4566677788788888888765421 112222333344
Q ss_pred HHHhhcChhHHHHhh-ccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhh----CCHhhHHHhhccchHHHHHH
Q psy11496 279 SILCQKNNENRKLLG-DLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCL----MLEENKERFLKGEGLQLMNL 353 (607)
Q Consensus 279 ~Illq~~~~~~~~l~-~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL----~~~~nk~~F~e~eGveLml~ 353 (607)
.-|-..++.++..++ ..+||..|++.|.. +......+..++..-+|.++- -.++++..+.+..||..++.
T Consensus 312 ~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~-----~~~~~~~~v~~~A~~aL~nLs~~~a~~~~~~~~i~~~G~i~~Lv~ 386 (458)
T 3nmz_A 312 WNLSAHCTENKADICAVDGALAFLVGTLTY-----RSQTNTLAIIESGGGILRNVSSLIATNEDHRQILRENNCLQTLLQ 386 (458)
T ss_dssp HHHHHHCHHHHHHHHHSTTHHHHHHHHTTC-----CCSSSTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHH
T ss_pred HHHccCCHHHHHHHHHhcCcHHHHHHHhcC-----CCCcchHHHHHHHHHHHHHHHhcccCCHHHHHHHHHcccHHHHHH
Confidence 444444778888888 67789999988853 111111234444444554444 48899999999999999999
Q ss_pred HHhccc-CCcCchhHHHHHhhcCCCCchhhhhHHhhhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcCCC
Q psy11496 354 MLRERK-VSRNGSLKVLDHAICGPSGKDNANKFVDILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRNCS 431 (607)
Q Consensus 354 mL~~~k-~~r~~AlkvlD~al~~~~~~~~c~kFVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~l~ 431 (607)
+|+... ..+..|..++-.++.+ .++++..+++.+|+..+.. ++... ..+.-+.++..+..|+.+-|
T Consensus 387 LL~~~~~~v~~~A~~aL~nLa~~--~~~~~~~i~~~G~I~~Lv~-LL~s~---------~~~v~~~Aa~AL~nL~~~~p 453 (458)
T 3nmz_A 387 HLKSHSLTIVSNACGTLWNLSAR--NPKDQEALWDMGAVSMLKN-LIHSK---------HKMIAMGSAAALRNLMANRP 453 (458)
T ss_dssp HSSCSCHHHHHHHHHHHHHHHSS--CHHHHHHHHHHTHHHHHHT-TTTCS---------SHHHHHHHHHHHHHHHTCCS
T ss_pred HHcCCChHHHHHHHHHHHHHHcC--CHHHHHHHHHCCCHHHHHH-HHhCC---------CHHHHHHHHHHHHHHHcCCH
Confidence 998643 2344466666666542 5889999999999998744 33321 24456778888887776644
No 23
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=98.31 E-value=1.8e-05 Score=85.27 Aligned_cols=242 Identities=12% Similarity=0.071 Sum_probs=171.5
Q ss_pred HHHHHHHhhcccCCCch-HHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHH
Q psy11496 130 HTTIQELHAIATVPDLY-PLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCAL 208 (607)
Q Consensus 130 d~~Ik~l~~La~~P~LY-p~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~l 208 (607)
......++.++.++.-. +.....|+++.|+.||.|++.++..+++-.|..|++.. ...+..+++.+++..
T Consensus 227 ~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~a~~aL~~l~~~~---------~~~~~~v~~~g~i~~ 297 (529)
T 3tpo_A 227 RNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGP---------NERIEMVVKKGVVPQ 297 (529)
T ss_dssp HHHHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSC---------HHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHhcccchhhHHHHhhHHHHHHHHhcCCcHHHHHHHHHHHHHhhhhh---------hhhHHHHHhccchHH
Confidence 34455666666665433 33344688999999999999999999999999999742 123456678899999
Q ss_pred HHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhH
Q psy11496 209 LVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNEN 288 (607)
Q Consensus 209 Lv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~ 288 (607)
||+-|.. .+..-...++..+-|++...+.....+...+.++.|++-+.. +.+.-+..|+-+|+-|..+++..
T Consensus 298 Lv~lL~~------~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~--~~~~i~~~a~~aL~nl~~~~~~~ 369 (529)
T 3tpo_A 298 LVKLLGA------TELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTN--PKTNIQKEATWTMSNITAGRQDQ 369 (529)
T ss_dssp HHHHHTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTC--SSHHHHHHHHHHHHHHHTSCHHH
T ss_pred HHHHhcC------CChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHcC--CCHHHHHHHHHHHHHHhcccHHH
Confidence 9988742 234566788999999998888888888888888888887764 33455667777888888888888
Q ss_pred HHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC--CHhhHHHhhccchHHHHHHHHhcccC-CcCch
Q psy11496 289 RKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM--LEENKERFLKGEGLQLMNLMLRERKV-SRNGS 365 (607)
Q Consensus 289 ~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~--~~~nk~~F~e~eGveLml~mL~~~k~-~r~~A 365 (607)
+..+.+.+++..|+..+.. .+ .+.-.+..-+|+++.. .+++...+.+..+|..++.||...-+ -...+
T Consensus 370 ~~~v~~~g~i~~Lv~lL~~---~~------~~v~~~A~~aL~nl~~~~~~~~~~~l~~~g~i~~L~~LL~~~d~~i~~~~ 440 (529)
T 3tpo_A 370 IQQVVNHGLVPFLVGVLSK---AD------FKTQKAAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVI 440 (529)
T ss_dssp HHHHHHTTHHHHHHHHHHS---SC------HHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHhcC---CC------HHHHHHHHHHHHHHHcCCCHHHHHHHHHCcCHHHHHHHhcCCCHHHHHHH
Confidence 8888888888888887753 11 1223334456677663 67778889999999999999975421 12224
Q ss_pred hHHHHHhhc----CCCCchhhhhHHhhhchhhhHHh
Q psy11496 366 LKVLDHAIC----GPSGKDNANKFVDILGLRTIFPL 397 (607)
Q Consensus 366 lkvlD~al~----~~~~~~~c~kFVe~~GLk~lF~l 397 (607)
+..|...+. .......|..|.+.+|++.|-.+
T Consensus 441 L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~L 476 (529)
T 3tpo_A 441 LDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEAL 476 (529)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHTTCHHHHTGG
T ss_pred HHHHHHHHHHhHhccChHHHHHHHHHCCcHHHHHHH
Confidence 444443332 22234457778899999988444
No 24
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=98.18 E-value=0.00027 Score=80.37 Aligned_cols=284 Identities=14% Similarity=0.036 Sum_probs=186.8
Q ss_pred HHHHHHHhhcccCCCchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhcccccccc----------------ch---
Q psy11496 130 HTTIQELHAIATVPDLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNE----------------SE--- 190 (607)
Q Consensus 130 d~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e----------------~~--- 190 (607)
......+..|+..|+..+.+++.|+++.|+.+|.+.+.++...++..|..|.......+ +.
T Consensus 337 ~~a~~aL~~Ls~~~~~~~~i~~~g~l~~Ll~lL~~~~~~~~~~a~~~L~~L~~~~~~~~~~~~~i~~Lv~lL~~~d~~vr 416 (780)
T 2z6g_A 337 WTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVV 416 (780)
T ss_dssp HHHHHHHHHHHTSTTHHHHHHHTTHHHHHGGGTTCSCHHHHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHH
T ss_pred HHHHHHHHHhhcChHHHHHHHHhchHHHHHHHHcCCchHHHHHHHHHHHHHhccchhhhhhhhHHHHHHHHHcCCCHHHH
Confidence 34566778888899999999999999999999999999998888888888764331110 00
Q ss_pred hhH-----------HHHHHHHHhcchHHHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhH---HHHHHhhhhHHH
Q psy11496 191 EGT-----------ESLLTALLDQQVCALLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDV---IHDIGKQGIIQW 256 (607)
Q Consensus 191 e~~-----------~~lv~aL~e~~l~~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~---~~~l~~~~LL~w 256 (607)
..+ ......+++.+++..|++-|..-... -+-...++..+-||....++. ...+...+.++.
T Consensus 417 ~~A~~aL~~L~~~~~~~~~~i~~~g~i~~Lv~lL~~~~~~----~~v~~~Al~aL~nL~~~~~~~~~~~~~v~~~~~l~~ 492 (780)
T 2z6g_A 417 TCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDR----EDITEPAICALRHLTSRHQDAEMAQNAVRLHYGLPV 492 (780)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHTTTHHHHHHHHHHHHTTC----HHHHHHHHHHHHHTTSSSTTHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHHHccCCH----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHcCCHHH
Confidence 000 01123334455666676666431110 134466777888887755552 345666678999
Q ss_pred HHHHhhccCCCCcchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHHHhhh----hcC---------CCCChHHHHHHH
Q psy11496 257 SLKRLKAKIPFDGNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQLAYY----KRH---------DPNTPEEQEMME 323 (607)
Q Consensus 257 LL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~la~y----rk~---------Dp~~~eE~E~~e 323 (607)
|++-+.... ...-+..|+-+|+-|.. ++.++..+.+.+++..|++.+..- ++. =.......+..+
T Consensus 493 L~~lL~~~~-~~~v~~~A~~aL~nLa~-~~~~~~~i~~~g~i~~Lv~lL~~~~~~~~~~aa~al~nq~~~~~~~~~~v~~ 570 (780)
T 2z6g_A 493 VVKLLHPPS-HWPLIKATVGLIRNLAL-CPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVE 570 (780)
T ss_dssp HHHTTSTTC-CHHHHHHHHHHHHHHHS-SHHHHHHHHHTTHHHHHHHHHHHHHHHHHHTTC------CCSTTCCHHHHHH
T ss_pred HHHHhcCCC-hHHHHHHHHHHHHHHhc-CHHHHHHHHHCCCHHHHHHHHHhcchhHHHHHhhccccchhhcccChHHHHH
Confidence 988887532 11334455556666654 577777888888899898877531 110 001112245777
Q ss_pred HHHHHHHhhhCCHhhHHHhhccchHHHHHHHHhccc-CCcCchhHHHHHhhcCCCCchhhhhHHhhhchhhhHHhhhcCc
Q psy11496 324 NLFDTLCSCLMLEENKERFLKGEGLQLMNLMLRERK-VSRNGSLKVLDHAICGPSGKDNANKFVDILGLRTIFPLFMKTP 402 (607)
Q Consensus 324 Nlfd~L~slL~~~~nk~~F~e~eGveLml~mL~~~k-~~r~~AlkvlD~al~~~~~~~~c~kFVe~~GLk~lF~lfMkk~ 402 (607)
++..||+.+..++.|+..+.+..+|..++.+|+..- ..+..|..+|-.+.. .+++|..|.+.+|+..+..+.-.
T Consensus 571 ~a~~aL~~La~~~~~~~~l~~~~~i~~Lv~lL~~~~~~v~~~a~~aL~~L~~---~~~~~~~i~~~g~i~~L~~Ll~~-- 645 (780)
T 2z6g_A 571 ACTGALHILARDIHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQ---DKEAAEAIEAEGATAPLTELLHS-- 645 (780)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHTCCHHHHHHGGGCSCHHHHHHHHHHHHHHHT---SHHHHHHHHHTTCHHHHHHGGGC--
T ss_pred HHHHHHHHHhcChhhHHHHHHCCcHHHHHHHHcCCCHHHHHHHHHHHHHHhc---CHHHHHHHHHCCCHHHHHHHHcC--
Confidence 888999999889999999999999999999998642 223335566655543 47899999999999998554322
Q ss_pred ccCcCCCcchhhhhHHHHHHHHhhhcCCCc
Q psy11496 403 KKNRRKIITVEEHEEHVVSIKANMLRNCSG 432 (607)
Q Consensus 403 kk~kk~~~~~~e~~Eh~~siiaSLlr~l~~ 432 (607)
...+.-+++...+..+..+-+.
T Consensus 646 --------~~~~Vr~~A~~aL~~l~~~~~~ 667 (780)
T 2z6g_A 646 --------RNEGVATYAAAVLFRMSEDKPQ 667 (780)
T ss_dssp --------SCHHHHHHHHHHHHHHHTTSCT
T ss_pred --------CCHHHHHHHHHHHHHHHcCChH
Confidence 1245566777777766665553
No 25
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=98.18 E-value=8.1e-05 Score=86.01 Aligned_cols=268 Identities=14% Similarity=0.130 Sum_probs=187.0
Q ss_pred HHHHHHHHhhcccCCCchHHHHh-cCChHHHHHhhccCCchhHHHHHHHhhhhcc-cccc------------------c-
Q psy11496 129 LHTTIQELHAIATVPDLYPLLVQ-LKAVSSMLELVLHENTDIAVAVVDLLQELTD-VDVL------------------N- 187 (607)
Q Consensus 129 Ld~~Ik~l~~La~~P~LYp~~v~-l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD-~d~~------------------~- 187 (607)
+..++-.|.-|+..|+.+..++. .|+++.|++||.|+++.|.-.+..+|.-||- .|.- .
T Consensus 396 ~~~AveaLayLS~~~~vk~~lv~d~g~Ip~LV~LL~s~d~~i~~~al~~L~NLt~~~d~q~~~~~l~~la~~s~~~v~~~ 475 (810)
T 3now_A 396 RRWAADGLAYLTLDAECKEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEE 475 (810)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHHHHTTCGGGHHHHHHHHHHHTTCSCCCCCCCSCGGGTTTTCCSCCCS
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHccchHHHHHHHhCCCChHHHHHHHHHHHHHcCCchhhhhhHHHHHHHHHhhccCccc
Confidence 56677888889999999999995 7999999999999999999999999999995 3311 0
Q ss_pred cc---hhhHHHHHHHHHhcchHHHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhcc
Q psy11496 188 ES---EEGTESLLTALLDQQVCALLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAK 264 (607)
Q Consensus 188 e~---~e~~~~lv~aL~e~~l~~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~ 264 (607)
.. .+....-+.++++++++..||+-|..=+. .--.++..++=||.. +++....+++++.++-|+.-++..
T Consensus 476 ~~ld~~~~v~~r~~~VveaGaVp~LV~LL~s~s~------~vqe~Aa~aL~NLA~-d~~~r~~Vv~~Gaip~Lv~LL~s~ 548 (810)
T 3now_A 476 HELDDVDFINKRITVLANEGITTALCALAKTESH------NSQELIARVLNAVCG-LKELRGKVVQEGGVKALLRMALEG 548 (810)
T ss_dssp SCHHHHHHHHHHHHHHHHTTHHHHHHHHHTCCCH------HHHHHHHHHHHHHHT-SHHHHHHHHHTTHHHHHHHHHHSS
T ss_pred cccccHHHHHHHHHHHHHCcCHHHHHHHHcCCCH------HHHHHHHHHHHHHcC-CHHHHHHHHHCCCHHHHHHHHccC
Confidence 00 11122335789999999999998864222 223345566667774 777788888999999999888763
Q ss_pred CCCCcchhhHHHHHHHHhhc-ChhHHHHhh---ccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC-CHhhH
Q psy11496 265 IPFDGNKLYTSEILSILCQK-NNENRKLLG---DLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM-LEENK 339 (607)
Q Consensus 265 ~~~D~Nk~YasEiL~Illq~-~~~~~~~l~---~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~-~~~nk 339 (607)
.+.-+..|+..|+-|..+ ++... ++ ..+++..|++.|.. ++ +. ....+...+|+++.. .++++
T Consensus 549 --~~~~k~~Aa~AL~nL~~~~~p~~~--~~~~~~~~aIppLv~LL~~----~~-~~---l~~~eAl~AL~NLa~~~d~~~ 616 (810)
T 3now_A 549 --TEKGKRHATQALARIGITINPEVS--FSGQRSLDVIRPLLNLLQQ----DC-TA---LENFESLMALTNLASMNESVR 616 (810)
T ss_dssp --CHHHHHHHHHHHHHHHHHSCHHHH--TTTHHHHHTHHHHHHTTST----TS-CH---HHHHHHHHHHHHHTTSCHHHH
T ss_pred --CHHHHHHHHHHHHHHhcCCChhhh--hcchhhhcHHHHHHHHhCC----CC-cH---HHHHHHHHHHHHHhcCCHHHH
Confidence 445678888889887654 44321 11 13578888877742 21 11 111234567888885 47889
Q ss_pred HHhhccchHHHHHHHHhccc-CCcCchhHHHHHhhcCCCCchhhhhHHh-hhchhhhHHhhhcCcccCcCCCcchhhhhH
Q psy11496 340 ERFLKGEGLQLMNLMLRERK-VSRNGSLKVLDHAICGPSGKDNANKFVD-ILGLRTIFPLFMKTPKKNRRKIITVEEHEE 417 (607)
Q Consensus 340 ~~F~e~eGveLml~mL~~~k-~~r~~AlkvlD~al~~~~~~~~c~kFVe-~~GLk~lF~lfMkk~kk~kk~~~~~~e~~E 417 (607)
.++.+..|+.-+..+|.... .-+..|..++-.+++ +++...+|++ .++++.+.. ++..+ ..+.-.
T Consensus 617 ~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~---~~~~~~~~v~~~g~l~~Lv~-LL~s~---------d~~vq~ 683 (810)
T 3now_A 617 QRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVM---SEDVIKMFEGNNDRVKFLAL-LCEDE---------DEETAT 683 (810)
T ss_dssp HHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTT---SHHHHHHHHSSSSHHHHHHH-GGGCS---------SHHHHH
T ss_pred HHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhC---ChHHHHHHHhccCcHHHHHH-HhcCC---------CHHHHH
Confidence 99999999999998888764 346667888877765 5778899997 567777644 44322 234445
Q ss_pred HHHHHHHhhhc
Q psy11496 418 HVVSIKANMLR 428 (607)
Q Consensus 418 h~~siiaSLlr 428 (607)
.+++.++.+..
T Consensus 684 ~Aa~ALanLt~ 694 (810)
T 3now_A 684 ACAGALAIITS 694 (810)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 56666665543
No 26
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=98.17 E-value=0.00046 Score=74.75 Aligned_cols=277 Identities=13% Similarity=0.103 Sum_probs=179.5
Q ss_pred HHHHHhhcccCCCchHHHHhcCChHHHHHhhccCCc---------------------------------hhH--HHHHHH
Q psy11496 132 TIQELHAIATVPDLYPLLVQLKAVSSMLELVLHENT---------------------------------DIA--VAVVDL 176 (607)
Q Consensus 132 ~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLsHeNt---------------------------------DIa--i~vi~l 176 (607)
..+.|..++..|+.--..++.||++.|+++|.+... +.. .-++.+
T Consensus 49 ~~~~ll~~~~~~~~~~~~~~~g~~p~lv~~l~~~~~~~~~~~~~~~~~~~~~~a~~al~ni~~~~~~~~~~~~~~~~~~~ 128 (458)
T 3nmz_A 49 MSRTLLAMSSSQDSCISMRQSGCLPLLIQLLHGNDKDSVLLGNSRGSKEARARASAALHNIIHSQPDDKRGRREIRVLHL 128 (458)
T ss_dssp HHHHHHHHHSSTTHHHHHHHHTCHHHHHHHHTCTTCCSCC---CCCCHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcHHHHHHHCCCHHHHHHHHhcccccccccccccCCHHHHHHHHHHHHHHHccCcchhHHHHHHHHHHH
Confidence 889999999999966678999999999999986421 121 112222
Q ss_pred hhhh---c------------cccc----cccc--hh--hH----------HHHHHHHHhcchHHHHHHhhhhc----cCC
Q psy11496 177 LQEL---T------------DVDV----LNES--EE--GT----------ESLLTALLDQQVCALLVQNLERL----DET 219 (607)
Q Consensus 177 L~EL---t------------D~d~----~~e~--~e--~~----------~~lv~aL~e~~l~~lLv~nL~Rl----dE~ 219 (607)
|..+ + +.|. ..+. +. ++ ...-+.+++.+++..|++-|..= .-.
T Consensus 129 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qAv~aL~nls~~~e~R~~i~~~G~l~~Lv~LL~~~~~~~~~~ 208 (458)
T 3nmz_A 129 LEQIRAYCETCWEWQEAHEPGMDQDKNPMPAPVEHQICPAVCVLMKLSFDEEHRHAMNELGGLQAIAELLQVDCEMYGLT 208 (458)
T ss_dssp HHHHHHHHHHHHHHHTTTSSSSCCCSCC--CCCTTTTHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHHHHHHHHSTTC
T ss_pred HHHhhhhhHHHHHHHHhhccccccccCCccchhhHHHHHHHHHHHHhcCCHHHHHHHHHCCCHHHHHHHHhhhhcccccc
Confidence 2221 1 1110 0000 00 00 23456788889999898888531 111
Q ss_pred -chhhhhhhhhhHHHhhhhhcCChhHHHHHHh-hhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhc-ChhHHHHhhccc
Q psy11496 220 -VKEESDGVHNTLGIFENLCELKPDVIHDIGK-QGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQK-NNENRKLLGDLD 296 (607)
Q Consensus 220 -~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~-~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~-~~~~~~~l~~~d 296 (607)
......-..++..++-||..-++.....++. .+.++-|++-+.. +.+.-+.+|+-.|+-|--. ++.++..+++.+
T Consensus 209 ~~~~~~~l~~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s--~~~~v~~~A~~aL~nLs~~~~~~~k~~I~~~G 286 (458)
T 3nmz_A 209 NDHYSITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKS--ESEDLQQVIASVLRNLSWRADVNSKKTLREVG 286 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHCHHHHHHHHHGGGC--SCHHHHHHHHHHHHHHTSSCCHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHHHHHHhCCCcccHHHHHHcCCcHHHHHHHHhC--CCHHHHHHHHHHHHHHhcCCCHHHHHHHHHcC
Confidence 1122344678889999999755545455554 5688999988874 2344566666677777543 678999999999
Q ss_pred cHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC-CHhhHHHhh-ccchHHHHHHHHhcccCC-----cCchhHHH
Q psy11496 297 GIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM-LEENKERFL-KGEGLQLMNLMLRERKVS-----RNGSLKVL 369 (607)
Q Consensus 297 gid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~-e~eGveLml~mL~~~k~~-----r~~Alkvl 369 (607)
||..|++.|... . ..+..++...+|.++-. .++||..+. ...|+..++.+|+..... +..|.-+|
T Consensus 287 aI~~LV~lLl~s-----~---~~~v~~~A~~aL~nLs~~~~~nk~~I~~~~Gal~~Lv~LL~~~~~~~~~~v~~~A~~aL 358 (458)
T 3nmz_A 287 SVKALMECALEV-----K---KESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGIL 358 (458)
T ss_dssp HHHHHHHHHTTC-----C---SHHHHHHHHHHHHHHHHHCHHHHHHHHHSTTHHHHHHHHTTCCCSSSTTHHHHHHHHHH
T ss_pred CHHHHHHHHhcC-----C---CHHHHHHHHHHHHHHccCCHHHHHHHHHhcCcHHHHHHHhcCCCCcchHHHHHHHHHHH
Confidence 999999987531 1 23456677778888876 889999998 788899999999865433 22233344
Q ss_pred HHhhc-CCCCchhhhhHHhhhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhc
Q psy11496 370 DHAIC-GPSGKDNANKFVDILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLR 428 (607)
Q Consensus 370 D~al~-~~~~~~~c~kFVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr 428 (607)
-.+.. ...+++++..+++.+|+..+..+ ++.. ..+..+++++.++.+..
T Consensus 359 ~nLs~~~a~~~~~~~~i~~~G~i~~Lv~L-L~~~---------~~~v~~~A~~aL~nLa~ 408 (458)
T 3nmz_A 359 RNVSSLIATNEDHRQILRENNCLQTLLQH-LKSH---------SLTIVSNACGTLWNLSA 408 (458)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTHHHHHHHH-SSCS---------CHHHHHHHHHHHHHHHS
T ss_pred HHHHhcccCCHHHHHHHHHcccHHHHHHH-HcCC---------ChHHHHHHHHHHHHHHc
Confidence 33332 01257899999999999988554 3321 24567788888877653
No 27
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=98.17 E-value=4.8e-05 Score=85.76 Aligned_cols=255 Identities=15% Similarity=0.153 Sum_probs=179.1
Q ss_pred HHHHHHHhhcccCCCchHHHHhcCChHHHHHhhccC--CchhHHHHHHHhhhhccccccccc--------hhhHHHHHHH
Q psy11496 130 HTTIQELHAIATVPDLYPLLVQLKAVSSMLELVLHE--NTDIAVAVVDLLQELTDVDVLNES--------EEGTESLLTA 199 (607)
Q Consensus 130 d~~Ik~l~~La~~P~LYp~~v~l~~v~sL~~LLsHe--NtDIai~vi~lL~ELtD~d~~~e~--------~e~~~~lv~a 199 (607)
-+++.+|.-+|. -||.-|-.++++.|++.|..+ +.||+-.|++.|--++.++...+. ++-...+.|.
T Consensus 40 R~Av~~Lk~~sk---~y~~~Vg~~~l~~li~~L~~d~~D~e~v~~~LetL~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~ 116 (651)
T 3grl_A 40 RNAVRALKSLSK---KYRLEVGIQAMEHLIHVLQTDRSDSEIIGYALDTLYNIISNDEEEEVEENSTRQSEDLGSQFTEI 116 (651)
T ss_dssp HHHHHHHHHTTT---TTTTHHHHHTHHHHHHHHHSCTTCHHHHHHHHHHHHHHHCCC--------------CHHHHHHHH
T ss_pred HHHHHHHHHHHH---HhHHHhhhhhHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcccccccccccchHHHHHHHHH
Confidence 467778887763 499999999999999999775 777899999999777765543211 1122446677
Q ss_pred HH-hcchHHHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChh-HHHHHHhh-hhHHHHHHHhhccCCCCcchhhHHH
Q psy11496 200 LL-DQQVCALLVQNLERLDETVKEESDGVHNTLGIFENLCELKPD-VIHDIGKQ-GIIQWSLKRLKAKIPFDGNKLYTSE 276 (607)
Q Consensus 200 L~-e~~l~~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~-~~~~l~~~-~LL~wLL~Rl~~~~~~D~Nk~YasE 276 (607)
++ +.+-+.+|++-|+ ..|..--++++.+++.|+.-+|+ +-+.+... +=++-|+.-++...+.=+|..- =
T Consensus 117 f~~~~~~i~~Ll~lL~------~~df~vR~~alqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneal--l 188 (651)
T 3grl_A 117 FIKQQENVTLLLSLLE------EFDFHVRWPGVKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGV--L 188 (651)
T ss_dssp HHHSTHHHHHHHHHTT------CCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHH--H
T ss_pred HHcCCccHHHHHHHhc------CccHHHHHHHHHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHH--H
Confidence 76 4567788888873 24556668899999999999999 55666654 5677788888754222222211 1
Q ss_pred HHHHHhhcChhHHHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhh-CCHhhHHHhhccchHHHHHHHH
Q psy11496 277 ILSILCQKNNENRKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCL-MLEENKERFLKGEGLQLMNLML 355 (607)
Q Consensus 277 iL~Illq~~~~~~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL-~~~~nk~~F~e~eGveLml~mL 355 (607)
+|.-|..+++++++.+.-.++++.|...+..= ...+-...++.++.+|+++| ..+.|+.-|.+..++.-+..++
T Consensus 189 LL~~Lt~~n~~iQklVAFEnaFe~Lf~Ii~~E-----g~~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~L~~LL 263 (651)
T 3grl_A 189 LLQALTRSNGAIQKIVAFENAFERLLDIITEE-----GNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWF 263 (651)
T ss_dssp HHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHH-----TGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGGGG
T ss_pred HHHHHhcCCHHHHHHHHHhccHHHHHHHHHhc-----CCCccchhHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHh
Confidence 34444677778887777778999999998761 22455677889999999999 5888999999999998887777
Q ss_pred hcccCCcC----c------hhHHHHHhhcCCC----CchhhhhHHhhhchhhhHHhhhc
Q psy11496 356 RERKVSRN----G------SLKVLDHAICGPS----GKDNANKFVDILGLRTIFPLFMK 400 (607)
Q Consensus 356 ~~~k~~r~----~------AlkvlD~al~~~~----~~~~c~kFVe~~GLk~lF~lfMk 400 (607)
........ . ++.+...+++... .+.|-..|.+.+|+..+..+.|.
T Consensus 264 ~~~~~~~~W~~Qk~~N~~~~L~iIrlLv~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~ 322 (651)
T 3grl_A 264 EVGDENSGWSAQKVTNLHLMLQLVRVLVSPNNPPGATSSCQKAMFQCGLLQQLCTILMA 322 (651)
T ss_dssp CCCSCSSCCCHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTC
T ss_pred CCCccccccHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHCCCHHHHHHHHcc
Confidence 64321111 1 4667777776432 12455668899999988877775
No 28
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=98.17 E-value=0.00038 Score=74.00 Aligned_cols=275 Identities=13% Similarity=0.079 Sum_probs=173.5
Q ss_pred HHHHHHHhhcccCC-CchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHH
Q psy11496 130 HTTIQELHAIATVP-DLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCAL 208 (607)
Q Consensus 130 d~~Ik~l~~La~~P-~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~l 208 (607)
-.+...|..|+.+. ..-..+++.|+++.|+.+|.|+|.++...++..|.-|.-.. .+. -.++++++.+..
T Consensus 20 ~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~-----~~~----k~~i~~~G~i~~ 90 (457)
T 1xm9_A 20 AIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS-----TTN----KLETRRQNGIRE 90 (457)
T ss_dssp HHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSC-----HHH----HHHHHHTTCHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCC-----HHH----HHHHHHcCCHHH
Confidence 35566677777654 45668999999999999999999999999999999987531 122 345667899999
Q ss_pred HHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhc------cCCCCcc------h--hhH
Q psy11496 209 LVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKA------KIPFDGN------K--LYT 274 (607)
Q Consensus 209 Lv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~------~~~~D~N------k--~Ya 274 (607)
||+-|.+= .+.+-..++.+.+-||... ++....+++ +.++-|++-+.. +.+.... . ..|
T Consensus 91 Lv~lL~~~-----~~~~~~~~a~~aL~nLa~~-~~~~~~i~~-g~i~~Lv~ll~~~~s~~~~~~~~~~~e~~~~~v~~~a 163 (457)
T 1xm9_A 91 AVSLLRRT-----GNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNA 163 (457)
T ss_dssp HHHHHTTC-----CCHHHHHHHHHHHHHHHTS-SSTHHHHHH-HHHHHHHHHTTHHHHTCC---------CCCHHHHHHH
T ss_pred HHHHHhhC-----CCHHHHHHHHHHHHHHhcC-HHhHHHHHh-ccHHHHHHHHhccccccccCccchhcccccHHHHHHH
Confidence 99998531 1234556778889999974 777777888 888888888842 1111110 0 134
Q ss_pred HHHHHHHhhcChhHHHHhhcc-ccHHHHHHHHhhh---hcCCCCChH---------------------------------
Q psy11496 275 SEILSILCQKNNENRKLLGDL-DGIDILLQQLAYY---KRHDPNTPE--------------------------------- 317 (607)
Q Consensus 275 sEiL~Illq~~~~~~~~l~~~-dgid~LL~~la~y---rk~Dp~~~e--------------------------------- 317 (607)
.-+|+-|... ++++..+.+. ++++.|++.|..- .+.|...-+
T Consensus 164 ~~aL~nLs~~-~~~~~~i~~~~g~i~~Lv~lL~~~~~~~~~~~~~~e~a~~~L~nLs~~~~~~~~~~~~~~~~~~~~~~~ 242 (457)
T 1xm9_A 164 TGCLRNLSSA-DAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYT 242 (457)
T ss_dssp HHHHHHHTTS-HHHHHHHTTSTTHHHHHHHHHHHHHHHTCTTCTTHHHHHHHHHHHTTTHHHHSCCHHHHHHHTC-----
T ss_pred HHHHHHHccC-HHHHHHHHHcCCCHHHHHHHHHhhccccCCchHHHHHHHHHHHhcccchhccCcchhhhcccccccccc
Confidence 4456666655 8899999987 7899998877631 011111100
Q ss_pred ------------------------------------------------------HHHHHHHHHHHHHhhhCC--H---hh
Q psy11496 318 ------------------------------------------------------EQEMMENLFDTLCSCLML--E---EN 338 (607)
Q Consensus 318 ------------------------------------------------------E~E~~eNlfd~L~slL~~--~---~n 338 (607)
..+..++..-+|+.+-.. + ..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~L~~lL~~~~~~~~~e~a~~aL~nl~~~~~~~~~~~ 322 (457)
T 1xm9_A 243 EKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGM 322 (457)
T ss_dssp -----------------------CCCCCSSCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTTCSSSHHHHH
T ss_pred cccccchhhccchhhhhccccCCccccccCchHHHHHhCcchHHHHHHHHhhcCCHHHHHHHHHHHHHhccCcCcchHHH
Confidence 012222233333333321 1 22
Q ss_pred -HHHhhccchHHHHHHHHhccc-CCcCchhHHHHHhhcCCCCchhhhhHHhhhchhhhHHhhhcCcccCcCCCcchhhhh
Q psy11496 339 -KERFLKGEGLQLMNLMLRERK-VSRNGSLKVLDHAICGPSGKDNANKFVDILGLRTIFPLFMKTPKKNRRKIITVEEHE 416 (607)
Q Consensus 339 -k~~F~e~eGveLml~mL~~~k-~~r~~AlkvlD~al~~~~~~~~c~kFVe~~GLk~lF~lfMkk~kk~kk~~~~~~e~~ 416 (607)
|..+.+..|+..++.+|+... ..+..|..++-.++. ++.++ ..+..+|+..+-.++.....+ + ....+..
T Consensus 323 ~~~~v~~~~~l~~Lv~LL~~~~~~v~~~A~~aL~nls~---~~~~~-~~i~~~~i~~Lv~lL~~~~~~--~--~~~~~v~ 394 (457)
T 1xm9_A 323 SQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSR---HPLLH-RVMGNQVFPEVTRLLTSHTGN--T--SNSEDIL 394 (457)
T ss_dssp HHHHHTTSCCHHHHHHHTTCSCHHHHHHHHHHHHHHHT---SGGGH-HHHHHHTHHHHHHTTTSCCSC--S--TTHHHHH
T ss_pred HHHHHHHcCCchHHHHHHhCCCHhHHHHHHHHHHHHhc---CHHHH-HHHHHhhhHHHHHhccCCCCC--C--CCcHHHH
Confidence 455667899999999998753 234446666666654 34444 456678999886655432211 1 1235566
Q ss_pred HHHHHHHHhhhcC
Q psy11496 417 EHVVSIKANMLRN 429 (607)
Q Consensus 417 Eh~~siiaSLlr~ 429 (607)
..++.+++.++..
T Consensus 395 ~~~l~~l~ni~~~ 407 (457)
T 1xm9_A 395 SSACYTVRNLMAS 407 (457)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhc
Confidence 6777777766643
No 29
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=98.12 E-value=0.00069 Score=72.00 Aligned_cols=186 Identities=11% Similarity=0.087 Sum_probs=135.6
Q ss_pred ChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHHHHHhhhhccCCchhhhhhhhhhHHH
Q psy11496 154 AVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCALLVQNLERLDETVKEESDGVHNTLGI 233 (607)
Q Consensus 154 ~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~lLv~nL~RldE~~~~e~~gV~~~L~i 233 (607)
.++.|+.+|.++|.++-..++..|+.|+..+ ++.. ..+++.+.+..||+-|.. .+......+...
T Consensus 3 ~l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~-----~~~~----~~i~~~g~i~~Lv~lL~s------~~~~~~~~A~~a 67 (457)
T 1xm9_A 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQD-----ESAK----QQVYQLGGICKLVDLLRS------PNQNVQQAAAGA 67 (457)
T ss_dssp CHHHHHHHHHSSCTHHHHHHHHHHHHHTSSC-----SSHH----HHHHHTTHHHHHHHHTTS------SCHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCHHHHHHHHHHHHHHHcCC-----hHHH----HHHHHcCCHHHHHHHHcC------CCHHHHHHHHHH
Confidence 5788999999999999999999999998432 1112 245577999999998862 123445778888
Q ss_pred hhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHHHhh-hhc--
Q psy11496 234 FENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQLAY-YKR-- 310 (607)
Q Consensus 234 iENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~la~-yrk-- 310 (607)
+-||..-.|+....+++.+.++.|++-+... +...-+..|+-.|.-|-.. ++++..+++ +|+..|++.+.. +-.
T Consensus 68 L~nLa~~~~~~k~~i~~~G~i~~Lv~lL~~~-~~~~~~~~a~~aL~nLa~~-~~~~~~i~~-g~i~~Lv~ll~~~~s~~~ 144 (457)
T 1xm9_A 68 LRNLVFRSTTNKLETRRQNGIREAVSLLRRT-GNAEIQKQLTGLLWNLSST-DELKEELIA-DALPVLADRVIIPFSGWC 144 (457)
T ss_dssp HHHHHSSCHHHHHHHHHTTCHHHHHHHHTTC-CCHHHHHHHHHHHHHHHTS-SSTHHHHHH-HHHHHHHHHTTHHHHTCC
T ss_pred HHHHhcCCHHHHHHHHHcCCHHHHHHHHhhC-CCHHHHHHHHHHHHHHhcC-HHhHHHHHh-ccHHHHHHHHhccccccc
Confidence 8999975688888899999999999998742 1223344455566666555 789998888 889999998842 100
Q ss_pred CCCC-Ch---HHHHHHHHHHHHHHhhhCCHhhHHHhhcc-chHHHHHHHHhc
Q psy11496 311 HDPN-TP---EEQEMMENLFDTLCSCLMLEENKERFLKG-EGLQLMNLMLRE 357 (607)
Q Consensus 311 ~Dp~-~~---eE~E~~eNlfd~L~slL~~~~nk~~F~e~-eGveLml~mL~~ 357 (607)
+++. .. ...+...|..-+|.++-..+++|..+.+. .|++.++.+|+.
T Consensus 145 ~~~~~~~~e~~~~~v~~~a~~aL~nLs~~~~~~~~i~~~~g~i~~Lv~lL~~ 196 (457)
T 1xm9_A 145 DGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQN 196 (457)
T ss_dssp ---------CCCHHHHHHHHHHHHHHTTSHHHHHHHTTSTTHHHHHHHHHHH
T ss_pred cCccchhcccccHHHHHHHHHHHHHHccCHHHHHHHHHcCCCHHHHHHHHHh
Confidence 1111 11 13567778888888888779999999998 778999888885
No 30
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=98.12 E-value=4.4e-05 Score=82.05 Aligned_cols=243 Identities=13% Similarity=0.078 Sum_probs=170.4
Q ss_pred HHHHHHHHhhcccCCCchHHH-HhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHH
Q psy11496 129 LHTTIQELHAIATVPDLYPLL-VQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCA 207 (607)
Q Consensus 129 Ld~~Ik~l~~La~~P~LYp~~-v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~ 207 (607)
+-.....++.++.+..-.+.+ ...|+++.|+.||.|++.++...++..|..|++.. . ..+..+++.+++.
T Consensus 207 ~~~a~~~L~nl~~~~~~~~~~~~~~~~lp~L~~LL~~~~~~v~~~A~~aL~~L~~~~-----~----~~~~~i~~~g~i~ 277 (510)
T 3ul1_B 207 LRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISYLTDGP-----N----ERIEMVVKKGVVP 277 (510)
T ss_dssp HHHHHHHHHHHHCCCSSCCCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTSSC-----H----HHHHHHHTTTCHH
T ss_pred HHHHHHHHHHHhhcccchhHHHHHHhHHHHHHHHHhcCCHHHHHHHHHHHHHHhhch-----h----hhHHHHHhcccch
Confidence 334556667777765443333 34688999999999999999999999999999742 1 2345566788999
Q ss_pred HHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChh
Q psy11496 208 LLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNE 287 (607)
Q Consensus 208 lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~ 287 (607)
.||+-|.. .+..-...++..+-|++...+..+..+.+.+.++.|++-+.. +.+.-+.+|+-+|+-|...++.
T Consensus 278 ~Lv~lL~~------~~~~v~~~al~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~--~~~~v~~~A~~aL~nl~a~~~~ 349 (510)
T 3ul1_B 278 QLVKLLGA------TELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTN--PKTNIQKEATWTMSNITAGRQD 349 (510)
T ss_dssp HHHHHHTC------SCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGCC-CTTC--SSHHHHHHHHHHHHHHTTSCHH
T ss_pred hhhhhhcC------CChhhhhHHHHHHHHhhcCCHHHHHHHhhccchHHHHHHhcC--CCHHHHHHHHHHHHHHHcCcHH
Confidence 99988742 233456788899999998888888888888877777776654 3445567777888888888888
Q ss_pred HHHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC--CHhhHHHhhccchHHHHHHHHhcccC-CcCc
Q psy11496 288 NRKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM--LEENKERFLKGEGLQLMNLMLRERKV-SRNG 364 (607)
Q Consensus 288 ~~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~--~~~nk~~F~e~eGveLml~mL~~~k~-~r~~ 364 (607)
.+..+.+.+++..|+..+.. .++ +.-.+..-+|+++.. .++++..+.+..+++.++.||+..-+ -...
T Consensus 350 ~~~~v~~~g~i~~Lv~lL~~---~~~------~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i~~L~~LL~~~d~~i~~~ 420 (510)
T 3ul1_B 350 QIQQVVNHGLVPFLVGVLSK---ADF------KTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQV 420 (510)
T ss_dssp HHHHHHHTTHHHHHHHHHHS---SCH------HHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHcC---CCH------HHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHH
Confidence 88888888889888887753 221 222334445666663 67788889999999999999975421 1222
Q ss_pred hhHHHHHhh----cCCCCchhhhhHHhhhchhhhHHh
Q psy11496 365 SLKVLDHAI----CGPSGKDNANKFVDILGLRTIFPL 397 (607)
Q Consensus 365 AlkvlD~al----~~~~~~~~c~kFVe~~GLk~lF~l 397 (607)
++..|...+ ........|..|.+.+|++.+-.+
T Consensus 421 ~L~aL~nil~~~~~~~~~~~~~~~iee~ggl~~ie~L 457 (510)
T 3ul1_B 421 ILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEAL 457 (510)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHTTHHHHHHHG
T ss_pred HHHHHHHHHHHhHhccchHHHHHHHHHcCcHHHHHHH
Confidence 443333333 222234467778899999988443
No 31
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=97.97 E-value=0.00012 Score=76.47 Aligned_cols=224 Identities=13% Similarity=0.146 Sum_probs=159.3
Q ss_pred HHHHHHHHhhcccCCCchHHHH-h-cCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchH
Q psy11496 129 LHTTIQELHAIATVPDLYPLLV-Q-LKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVC 206 (607)
Q Consensus 129 Ld~~Ik~l~~La~~P~LYp~~v-~-l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~ 206 (607)
...+...|..|+...+-.+..| . .|+++.|+.||.++|.++-..++-.|.-|+..+. ++ --+++++.+.+
T Consensus 101 q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nLs~~~~----~~----~k~~i~~~G~I 172 (354)
T 3nmw_A 101 RRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNLSWRAD----VN----SKKTLREVGSV 172 (354)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHTTCC----HH----HHHHHHHTTHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHHHHHHCCCCHHHHHHHHHHHHHHhccCC----HH----HHHHHHHCCCH
Confidence 3455667888887766566655 4 4669999999999999999999999999986310 11 23455677899
Q ss_pred HHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHH-hhhhHHHHHHHhhccCCCC--cchhhHHHHHHHHhh
Q psy11496 207 ALLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIG-KQGIIQWSLKRLKAKIPFD--GNKLYTSEILSILCQ 283 (607)
Q Consensus 207 ~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~-~~~LL~wLL~Rl~~~~~~D--~Nk~YasEiL~Illq 283 (607)
..||+-|.+-. +.....++++.+=||....++....++ ..+.++-|++-+....+.. .-...|.=+|.-|-.
T Consensus 173 p~Lv~lL~~~~-----~~~~~~~A~~aL~nLs~~~~~nk~~i~~~~Gai~~Lv~lL~~~~~~~~~~v~~~A~~aL~nLs~ 247 (354)
T 3nmw_A 173 KALMECALEVK-----KESTLKSVLSALWNLSAHCTENKADICAVDGALAFLVGTLTYRSQTNTLAIIESGGGILRNVSS 247 (354)
T ss_dssp HHHHHHHHHCC-----CHHHHHHHHHHHHHHHTTCHHHHHHHHHSTTHHHHHHHHTTCCCSSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC-----CHHHHHHHHHHHHHHHccChhhhHHHHHhcCcHHHHHHHhccCCCcccHHHHHHHHHHHHHHHh
Confidence 99998875421 224556778888899875667777777 5688999999887542211 123444445555544
Q ss_pred ---cChhHHHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhh-CCHhhHHHhhccchHHHHHHHHhccc
Q psy11496 284 ---KNNENRKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCL-MLEENKERFLKGEGLQLMNLMLRERK 359 (607)
Q Consensus 284 ---~~~~~~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL-~~~~nk~~F~e~eGveLml~mL~~~k 359 (607)
.+++++..+.+.+++..|++.|.. + ..+..+|..-+|+.+. ..++++..+.+..||..+..+|+.+.
T Consensus 248 ~~a~~~~~~~~i~~~g~i~~Lv~lL~~-----~----~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s~~ 318 (354)
T 3nmw_A 248 LIATNEDHRQILRENNCLQTLLQHLKS-----H----SLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKH 318 (354)
T ss_dssp HHTTCHHHHHHHHTTTHHHHHHHHTTC-----S----CHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTCSS
T ss_pred hccCCHHHHHHHHHcCCHHHHHHHHcC-----C----ChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHhCCC
Confidence 688999999999999999998863 1 1235667777788887 47999999999999999999987653
Q ss_pred -CCcCchhHHHHHhhc
Q psy11496 360 -VSRNGSLKVLDHAIC 374 (607)
Q Consensus 360 -~~r~~AlkvlD~al~ 374 (607)
..+..|...|..++.
T Consensus 319 ~~i~~~A~~aL~nL~~ 334 (354)
T 3nmw_A 319 KMIAMGSAAALRNLMA 334 (354)
T ss_dssp HHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHc
Confidence 234556666666655
No 32
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=97.96 E-value=0.00016 Score=83.52 Aligned_cols=243 Identities=13% Similarity=0.154 Sum_probs=169.6
Q ss_pred HHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHHHHHhhhhccCCchhhhhh
Q psy11496 147 PLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCALLVQNLERLDETVKEESDG 226 (607)
Q Consensus 147 p~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~lLv~nL~RldE~~~~e~~g 226 (607)
...++.|+++.|+.||.|++.++-..++..|.-|.-. .+ ..+.+++++++..|++-|.. . +..+
T Consensus 489 ~~VveaGaVp~LV~LL~s~s~~vqe~Aa~aL~NLA~d------~~----~r~~Vv~~Gaip~Lv~LL~s---~---~~~~ 552 (810)
T 3now_A 489 TVLANEGITTALCALAKTESHNSQELIARVLNAVCGL------KE----LRGKVVQEGGVKALLRMALE---G---TEKG 552 (810)
T ss_dssp HHHHHTTHHHHHHHHHTCCCHHHHHHHHHHHHHHHTS------HH----HHHHHHHTTHHHHHHHHHHS---S---CHHH
T ss_pred HHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCC------HH----HHHHHHHCCCHHHHHHHHcc---C---CHHH
Confidence 4567889999999999999999999999999999732 11 35677888999999988742 1 1235
Q ss_pred hhhhHHHhhhhhc-CChhHHHHH-HhhhhHHHHHHHhhccCCCCcc-hhhHHHHHHHHhhcChhHHHHhhccccHHHHHH
Q psy11496 227 VHNTLGIFENLCE-LKPDVIHDI-GKQGIIQWSLKRLKAKIPFDGN-KLYTSEILSILCQKNNENRKLLGDLDGIDILLQ 303 (607)
Q Consensus 227 V~~~L~iiENl~e-~~p~~~~~l-~~~~LL~wLL~Rl~~~~~~D~N-k~YasEiL~Illq~~~~~~~~l~~~dgid~LL~ 303 (607)
..++...+-||+. .+|..+-.. ...+.++-|+.-+.. +.+.- ...|.-.|+-|...++.++..+.+.+|++.|.+
T Consensus 553 k~~Aa~AL~nL~~~~~p~~~~~~~~~~~aIppLv~LL~~--~~~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~ 630 (810)
T 3now_A 553 KRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQ--DCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEY 630 (810)
T ss_dssp HHHHHHHHHHHHHHSCHHHHTTTHHHHHTHHHHHHTTST--TSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHH
T ss_pred HHHHHHHHHHHhcCCChhhhhcchhhhcHHHHHHHHhCC--CCcHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHH
Confidence 5666777777663 456543211 012366666666652 12212 223444566667777899999998899999998
Q ss_pred HHhhhhcCCCCChHHHHHHHHHHHHHHhhhCCHhhHHHhhc-cchHHHHHHHHhccc-CCcCchhHHHHHhhcCCCCchh
Q psy11496 304 QLAYYKRHDPNTPEEQEMMENLFDTLCSCLMLEENKERFLK-GEGLQLMNLMLRERK-VSRNGSLKVLDHAICGPSGKDN 381 (607)
Q Consensus 304 ~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~~~~nk~~F~e-~eGveLml~mL~~~k-~~r~~AlkvlD~al~~~~~~~~ 381 (607)
.+.. .+|. .-.+...+||++...++++..|.+ ..++.+++.++.... ..+..|.-.|..++++ ++..
T Consensus 631 LL~s---~~~~------Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~--s~~~ 699 (810)
T 3now_A 631 YLME---DHLY------LTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSV--SVKC 699 (810)
T ss_dssp HHHS---CCTT------HHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHGGGCSSHHHHHHHHHHHHHHHHH--CHHH
T ss_pred HHcC---CCHH------HHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHHhcCCCHHHHHHHHHHHHHHhCC--CHHH
Confidence 8864 1221 224567788999999999999996 567888888988753 3455577888888774 4778
Q ss_pred hhhHHh-hhchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhc
Q psy11496 382 ANKFVD-ILGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLR 428 (607)
Q Consensus 382 c~kFVe-~~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr 428 (607)
|+.+++ ..|+..+..++.. ...+.-.+++..++.+..
T Consensus 700 ~~~ii~~~g~I~~Lv~LL~s----------~d~~vq~~A~~aL~NL~~ 737 (810)
T 3now_A 700 CEKILAIASWLDILHTLIAN----------PSPAVQHRGIVIILNMIN 737 (810)
T ss_dssp HHHHHTSTTHHHHHHHHHTC----------SSHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHCC----------CCHHHHHHHHHHHHHHHh
Confidence 999999 8999998664442 235555667777766655
No 33
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=97.79 E-value=0.00052 Score=70.05 Aligned_cols=194 Identities=11% Similarity=0.107 Sum_probs=137.6
Q ss_pred HHhHHHHHHHHhhc---ccCCCchHHHHhcCChHHHHH-hhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHH
Q psy11496 126 EIELHTTIQELHAI---ATVPDLYPLLVQLKAVSSMLE-LVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALL 201 (607)
Q Consensus 126 E~dLd~~Ik~l~~L---a~~P~LYp~~v~l~~v~sL~~-LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~ 201 (607)
+.++++-+..+..| ...++.=..|++.|+++.|+. ||.|+|.+|...++..|.-+...+ . ..-+.++
T Consensus 51 ~~~~e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n-----~----~~~~~vv 121 (296)
T 1xqr_A 51 AADQQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNV-----A----AIQEQVL 121 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTC-----H----HHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCC-----H----HHHHHHH
Confidence 44555555555554 444554556899999999999 999999999999999999987532 1 1234566
Q ss_pred hcchHHHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHH
Q psy11496 202 DQQVCALLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSIL 281 (607)
Q Consensus 202 e~~l~~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Il 281 (607)
+.+++..|++-|.. +. +....-+++..+-||+--.|.....+...+.++.|+.-++.. ...-+..|+-.|+-|
T Consensus 122 ~~g~l~~Ll~LL~~--~~---~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~--d~~v~~~A~~aLs~L 194 (296)
T 1xqr_A 122 GLGALRKLLRLLDR--DA---CDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQ--VQKLKVKSAFLLQNL 194 (296)
T ss_dssp HTTHHHHHHHHHHH--CS---CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSS--CHHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHcc--CC---CHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCC--CHHHHHHHHHHHHHH
Confidence 77999999988853 11 123345566677788876777777888877888888877753 334555666678888
Q ss_pred hhcChhHHHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhC-CHhhHHHhhc
Q psy11496 282 CQKNNENRKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLM-LEENKERFLK 344 (607)
Q Consensus 282 lq~~~~~~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e 344 (607)
...+++.+..+++.+++..|+..|.. .|+ +..+....+|++++. .+.++..+..
T Consensus 195 ~~~~~~~~~~vv~~g~i~~Lv~LL~~---~d~------~v~~~al~aL~~l~~~~~~~~~~~~~ 249 (296)
T 1xqr_A 195 LVGHPEHKGTLCSMGMVQQLVALVRT---EHS------PFHEHVLGALCSLVTDFPQGVRECRE 249 (296)
T ss_dssp HHHCGGGHHHHHHTTHHHHHHHHHTS---CCS------THHHHHHHHHHHHHTTCHHHHHHHHC
T ss_pred HhCChHHHHHHHHcCCHHHHHHHHcC---CCh------hHHHHHHHHHHHHHhCChhHHHHHhc
Confidence 88889999999998989999988864 222 345566777888884 4666666554
No 34
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.0097 Score=68.57 Aligned_cols=330 Identities=12% Similarity=0.176 Sum_probs=209.5
Q ss_pred HHHHHHHHhhcccCCCchHHHHh-cCChHHHHHhhcc-CCchhHHHHHHHhhhhcc-ccccccc----------------
Q psy11496 129 LHTTIQELHAIATVPDLYPLLVQ-LKAVSSMLELVLH-ENTDIAVAVVDLLQELTD-VDVLNES---------------- 189 (607)
Q Consensus 129 Ld~~Ik~l~~La~~P~LYp~~v~-l~~v~sL~~LLsH-eNtDIai~vi~lL~ELtD-~d~~~e~---------------- 189 (607)
..-+|..|..|+..|+.=..|++ -|++..|+.+|.+ +++++.-.|+.+|.-||. .+...+.
T Consensus 351 ~~~AvEgLaYLSl~~~VKe~L~~d~~~L~~Lv~llk~~~d~s~~Ygal~IL~NLt~~~~~~~~e~~~l~~Lk~~A~~~~p 430 (778)
T 3opb_A 351 VEMSVEALAYLSLKASVKIMIRSNESFTEILLTMIKSQKMTHCLYGLLVIMANLSTLPEEXXXXXXXXXXXXXXXXXXXP 430 (778)
T ss_dssp HHHHHHHHHHHTTSSHHHHHHHHCHHHHHHHHHHHTTTCCTTHHHHHHHHHHHTTCCCCCCCCCCC--------------
T ss_pred HHHHHHHHHHHhCCHHHHHHHHhCHHHHHHHHHHHhCCCCchHHHHHHHHHHHhcCCCcccchhhhhhhhhhhhccccCc
Confidence 77889999999999999888887 4779999999997 899999999999999996 3221110
Q ss_pred --------h---hhHHH-HHHHHHhcchHHHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHH
Q psy11496 190 --------E---EGTES-LLTALLDQQVCALLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWS 257 (607)
Q Consensus 190 --------~---e~~~~-lv~aL~e~~l~~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wL 257 (607)
. +.... -...+++++++..||+-+.--+.. --..+..++-||. .+++.-..+++++-++-|
T Consensus 431 ~~~~~d~~~~~~~~v~~~~~~~l~eaGvIp~Lv~Ll~S~s~~------~re~A~~aL~nLS-~d~~~R~~lvqqGal~~L 503 (778)
T 3opb_A 431 AADKVGAEKAAKEDILLFNEKYILRTELISFLKREMHNLSPN------CKQQVVRIIYNIT-RSKNFIPQLAQQGAVKII 503 (778)
T ss_dssp ----CCTHHHHHHHHHHHHHHHTTTTTHHHHHHHHGGGSCHH------HHHHHHHHHHHHH-TSGGGHHHHHHTTHHHHH
T ss_pred ccCcccccccchHHHHHHHHHHHHHCcCHHHHHHHHcCCCHH------HHHHHHHHHHHHc-CCHHHHHHHHHCCCHHHH
Confidence 0 01111 235778999999999777542221 2234556777776 478888999999999999
Q ss_pred HHHhhccCCC-CcchhhHHHHHHHHhhc-ChhHHHHhhc---cccHHHHHHHHhhhhcCCCCChH----------HHHHH
Q psy11496 258 LKRLKAKIPF-DGNKLYTSEILSILCQK-NNENRKLLGD---LDGIDILLQQLAYYKRHDPNTPE----------EQEMM 322 (607)
Q Consensus 258 L~Rl~~~~~~-D~Nk~YasEiL~Illq~-~~~~~~~l~~---~dgid~LL~~la~yrk~Dp~~~e----------E~E~~ 322 (607)
+..+....+. +..+..|+..|+-|+.+ +|.. .|+. .++|.-|+..|.. +|..+. ..+ .
T Consensus 504 L~lL~s~~~~~~~~k~~AA~ALArLlis~np~~--~f~~~~~~~aI~pLv~LL~~----~~~~~~~~l~~~~~~~~l~-~ 576 (778)
T 3opb_A 504 LEYLANKQDIGEPIRILGCRALTRMLIFTNPGL--IFKKYSALNAIPFLFELLPR----STPVDDNPLHNDEQIKLTD-N 576 (778)
T ss_dssp HHHTTCC---CCHHHHHHHHHHHHHHHTSCHHH--HSSSSCSTTHHHHHHHTSCC----SSSCSSCC---CCCCCHHH-H
T ss_pred HHHHhcCCCcchHHHHHHHHHHHHHHhcCCHHH--HcCCCccccchHHHHHHcCC----CCCcccccccccccccHHH-H
Confidence 9999876322 34688999999998744 4554 3432 4778889988873 122210 011 2
Q ss_pred HHHHHHHHhhhCCH-----hhHHHhhcc-chHHHHHHHHhcc-cCCcCchhHHHHHhhcCCCCchhh-hhHHhhh-----
Q psy11496 323 ENLFDTLCSCLMLE-----ENKERFLKG-EGLQLMNLMLRER-KVSRNGSLKVLDHAICGPSGKDNA-NKFVDIL----- 389 (607)
Q Consensus 323 eNlfd~L~slL~~~-----~nk~~F~e~-eGveLml~mL~~~-k~~r~~AlkvlD~al~~~~~~~~c-~kFVe~~----- 389 (607)
.|.+-+|+++...+ +.|.+..+. .|+..+..+|..- ..-+..|..++-.+++ ++++. .+|.+.+
T Consensus 577 feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~---~~e~i~~k~~~~~~~~~~ 653 (778)
T 3opb_A 577 YEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMS---HPLTIAAKFFNLENPQSL 653 (778)
T ss_dssp HHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHT---SGGGTGGGTSCCSSHHHH
T ss_pred HHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhC---CcHHHHHHHHhhcCchhh
Confidence 24455677777655 337777764 6777777777653 3456678888888876 45554 4775432
Q ss_pred -chhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcCCCchhhHHHHHHHhhcchhhHHHHHHhhhh-----hhhh
Q psy11496 390 -GLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRNCSGPQRQRLLSKFTENDHEKVDRLLELHFK-----YLSK 463 (607)
Q Consensus 390 -GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~l~~~~r~Rll~KFvE~~~eK~drL~el~~k-----~~~E 463 (607)
|++.+..+ +.. ...+.-.++.++++.+...-+ .++...++.. .-++.++++... ....
T Consensus 654 ~rL~lLV~L-l~s---------~D~~~r~AAagALAnLts~~~-----~ia~~ll~~~-~gi~~Ll~lL~~~~~~~~l~~ 717 (778)
T 3opb_A 654 RNFNILVKL-LQL---------SDVESQRAVAAIFANIATTIP-----LIAKELLTKK-ELIENAIQVFADQIDDIELRQ 717 (778)
T ss_dssp HHHHHHHHG-GGC---------SCHHHHHHHHHHHHHHHHHCH-----HHHHHHTTCH-HHHHHHHHHHHHTTTCHHHHH
T ss_pred ccHHHHHHH-HcC---------CCHHHHHHHHHHHHHhcCCCh-----HHHHHHHHcc-ccHHHHHHHHhccCCCHHHHH
Confidence 47776443 332 234555667777665432221 2344444432 223335555544 2233
Q ss_pred HHHHHHHHHhhcCCchhhhhhhhhhhhh
Q psy11496 464 HVVSIIANMLRNCSGPQRQRLLSKFTEN 491 (607)
Q Consensus 464 hvl~IiaSLl~~l~s~~R~RlLaKFvE~ 491 (607)
+.+-++.+|+...|+..=.+.+.+|++|
T Consensus 718 R~~~~l~NL~~~~~~~~~~~~~~~~~~~ 745 (778)
T 3opb_A 718 RLLMLFFGLFEVIPDNGTNEVYPLLQEN 745 (778)
T ss_dssp HHHHHHHHHHTTCCSTTTTSCCHHHHSC
T ss_pred HHHHHHHHHHHhhccCCChHHHHHHhcC
Confidence 4667777777766522222566777766
No 35
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=97.23 E-value=0.042 Score=61.40 Aligned_cols=189 Identities=12% Similarity=0.096 Sum_probs=129.1
Q ss_pred hcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHHHHHhhhhccCCchhhhhhhhhh
Q psy11496 151 QLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCALLVQNLERLDETVKEESDGVHNT 230 (607)
Q Consensus 151 ~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~lLv~nL~RldE~~~~e~~gV~~~ 230 (607)
+.++++.||.+|.++|.++-..+...|+-|+-.+ .+. -..+++.+.+..||+-|..= +..--.++
T Consensus 46 ~~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~-----~~~----k~~V~~~G~Ip~LV~LL~s~------~~~vq~~A 110 (584)
T 3l6x_A 46 RQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRN-----DKV----KTDVRKLKGIPVLVGLLDHP------KKEVHLGA 110 (584)
T ss_dssp CCCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTC-----HHH----HHHHHHTTHHHHHHHGGGCS------SHHHHHHH
T ss_pred ccccHHHHHHHHCCCCHHHHHHHHHHHHHHHcCC-----hHH----HHHHHHcCCcHHHHHHHCCC------CHHHHHHH
Confidence 4678999999999999999887778887776321 122 34556778999999998542 23455667
Q ss_pred HHHhhhhhcC-ChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHHH-hhh
Q psy11496 231 LGIFENLCEL-KPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQL-AYY 308 (607)
Q Consensus 231 L~iiENl~e~-~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~l-a~y 308 (607)
.+.+-||... +++....+++.+-++.|++-+.... ...-+-.|+-.|.-| ..+++++..+++ +||..|++.+ .++
T Consensus 111 a~AL~nLa~~~~~~nk~~I~~~GaIp~LV~LL~s~~-~~~~~e~aa~aL~nL-S~~~~~k~~I~~-~alp~Lv~LL~~p~ 187 (584)
T 3l6x_A 111 CGALKNISFGRDQDNKIAIKNCDGVPALVRLLRKAR-DMDLTEVITGTLWNL-SSHDSIKMEIVD-HALHALTDEVIIPH 187 (584)
T ss_dssp HHHHHHHTSSSCHHHHHHHHHTTHHHHHHHHHHHCC-SHHHHHHHHHHHHHH-TTSGGGHHHHHH-HTHHHHHHHTHHHH
T ss_pred HHHHHHHHccCCHHHHHHHHHcCCHHHHHHHHcCCC-CHHHHHHHHHHHHHH-hCCchhhHHHHh-ccHHHHHHHHhccc
Confidence 7888888864 4778888888888888888887521 111123333334333 557889998885 6899999866 233
Q ss_pred hcCC--------CCChHHHHHHHHHHHHHHhhhCC-HhhHHHhhccchH-HHHHHHHhc
Q psy11496 309 KRHD--------PNTPEEQEMMENLFDTLCSCLML-EENKERFLKGEGL-QLMNLMLRE 357 (607)
Q Consensus 309 rk~D--------p~~~eE~E~~eNlfd~L~slL~~-~~nk~~F~e~eGv-eLml~mL~~ 357 (607)
--.. +......+..+|...||.++-.. +.+|....+..|+ +.++.+|+.
T Consensus 188 sg~~~~~~~~~k~~~~~d~~V~~nAa~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~ 246 (584)
T 3l6x_A 188 SGWEREPNEDCKPRHIEWESVLTNTAGCLRNVSSERSEARRKLRECDGLVDALIFIVQA 246 (584)
T ss_dssp HCCC----------CCCCHHHHHHHHHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHH
T ss_pred ccccccccccccccccccHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHH
Confidence 1110 11222347788999999998864 5569999998886 677788775
No 36
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=97.15 E-value=0.018 Score=64.41 Aligned_cols=269 Identities=15% Similarity=0.148 Sum_probs=155.8
Q ss_pred HHHHHhhccc-CCCchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHHHH
Q psy11496 132 TIQELHAIAT-VPDLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCALLV 210 (607)
Q Consensus 132 ~Ik~l~~La~-~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~lLv 210 (607)
+...|..|+. .++.=-.+++.|+++.|+.||.|+|.++-..++-.|.-|.--+ +.+. -.++++++.+..||
T Consensus 68 Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa~~~----~~~n----k~~I~~~GaIp~LV 139 (584)
T 3l6x_A 68 AAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNISFGR----DQDN----KIAIKNCDGVPALV 139 (584)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHTSSS----CHHH----HHHHHHTTHHHHHH
T ss_pred HHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHHccC----CHHH----HHHHHHcCCHHHHH
Confidence 3455666775 5555667788999999999999999999999999999887421 0122 34556779999999
Q ss_pred HhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhc---------------cCCCCcc-hhhH
Q psy11496 211 QNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKA---------------KIPFDGN-KLYT 274 (607)
Q Consensus 211 ~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~---------------~~~~D~N-k~Ya 274 (607)
+-|..=.. ..-..++-+.+=||.. .++.-..++..+ ++-|++.+-. +...|.. ...|
T Consensus 140 ~LL~s~~~-----~~~~e~aa~aL~nLS~-~~~~k~~I~~~a-lp~Lv~LL~~p~sg~~~~~~~~~k~~~~~d~~V~~nA 212 (584)
T 3l6x_A 140 RLLRKARD-----MDLTEVITGTLWNLSS-HDSIKMEIVDHA-LHALTDEVIIPHSGWEREPNEDCKPRHIEWESVLTNT 212 (584)
T ss_dssp HHHHHCCS-----HHHHHHHHHHHHHHTT-SGGGHHHHHHHT-HHHHHHHTHHHHHCCC----------CCCCHHHHHHH
T ss_pred HHHcCCCC-----HHHHHHHHHHHHHHhC-CchhhHHHHhcc-HHHHHHHHhcccccccccccccccccccccHHHHHHH
Confidence 98864211 1112334455556654 566666666543 5666655410 1111222 2346
Q ss_pred HHHHHHHhhcChhHHHHhhcccc-HHHHHHHHhhh-hcCCCCChHHHHHHHHHHHHHHhhhCC-----------------
Q psy11496 275 SEILSILCQKNNENRKLLGDLDG-IDILLQQLAYY-KRHDPNTPEEQEMMENLFDTLCSCLML----------------- 335 (607)
Q Consensus 275 sEiL~Illq~~~~~~~~l~~~dg-id~LL~~la~y-rk~Dp~~~eE~E~~eNlfd~L~slL~~----------------- 335 (607)
+-+|.-|-..++.+|..+.+.+| ++.|+..|..- .+.++.. ..++|..-+|.++-..
T Consensus 213 a~~L~NLs~~~~~~R~~i~~~~Gli~~LV~~L~~~~~~~~~~~----~~~enav~aL~NLs~~~~~e~~~~~~~~~~~~~ 288 (584)
T 3l6x_A 213 AGCLRNVSSERSEARRKLRECDGLVDALIFIVQAEIGQKDSDS----KLVENCVCLLRNLSYQVHREIPQAERYQEAAPN 288 (584)
T ss_dssp HHHHHHHTSSCHHHHHHHHHSTTHHHHHHHHHHHHHHTTCCSC----HHHHHHHHHHHHHHTTHHHHSTTCCC-------
T ss_pred HHHHHHHhcCCHHHHHHHHHcCCcHHHHHHHHHHhhcccCccH----HHHHHHHHHHHHhhccccccccchhhhhhhccc
Confidence 67788887778888999998777 57888887642 1222222 2344443333222211
Q ss_pred ---------HhhHHHhhccchHHHHHHHHhccc--CCcCchhHHHHHhhcCCCC-chhhh-hHHhhhchhhhHHhhhcCc
Q psy11496 336 ---------EENKERFLKGEGLQLMNLMLRERK--VSRNGSLKVLDHAICGPSG-KDNAN-KFVDILGLRTIFPLFMKTP 402 (607)
Q Consensus 336 ---------~~nk~~F~e~eGveLml~mL~~~k--~~r~~AlkvlD~al~~~~~-~~~c~-kFVe~~GLk~lF~lfMkk~ 402 (607)
+.+...+....+|..++.+|+... .....|.-.|-++|.+... +.... .+.+..|+..+-.++...
T Consensus 289 ~~~~~~~~~~~Gve~L~~~~~v~~Ll~LL~~s~~~~v~E~Aa~AL~nL~ag~~~~~~~~~~~v~~~~glp~Lv~LL~s~- 367 (584)
T 3l6x_A 289 VANNTGTSPARGYELLFQPEVVRIYISLLKESKTPAILEASAGAIQNLCAGRWTYGRYIRSALRQEKALSAIADLLTNE- 367 (584)
T ss_dssp -------CCCCGGGGGGSHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHSSCSHHHHHHHHHHTSHHHHHHHHHGGGCS-
T ss_pred ccccccccCchhHHHHhcccHHHHHHHHHccCCCHHHHHHHHHHHHHHHcCCccccHHHHHHHHHcCcHHHHHHHHcCC-
Confidence 111222223334445566776532 2234467777777764211 12233 445578898885655432
Q ss_pred ccCcCCCcchhhhhHHHHHHHHhhhcC
Q psy11496 403 KKNRRKIITVEEHEEHVVSIKANMLRN 429 (607)
Q Consensus 403 kk~kk~~~~~~e~~Eh~~siiaSLlr~ 429 (607)
..+....+++.+..|-..
T Consensus 368 ---------~~~v~~~A~~aL~nLs~~ 385 (584)
T 3l6x_A 368 ---------HERVVKAASGALRNLAVD 385 (584)
T ss_dssp ---------CHHHHHHHHHHHHHHHTT
T ss_pred ---------CHHHHHHHHHHHHHHhCC
Confidence 245666676666666544
No 37
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=97.02 E-value=0.0074 Score=69.52 Aligned_cols=265 Identities=11% Similarity=0.123 Sum_probs=167.4
Q ss_pred HHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHHHHHhhhhccCCchhhhhh
Q psy11496 147 PLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCALLVQNLERLDETVKEESDG 226 (607)
Q Consensus 147 p~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~lLv~nL~RldE~~~~e~~g 226 (607)
..+++.|+++.|+.||+|++..+-..++.+|.-|+-.. +. ...+++++.+..|++-|..-.+... .+
T Consensus 451 ~~l~eaGvIp~Lv~Ll~S~s~~~re~A~~aL~nLS~d~------~~----R~~lvqqGal~~LL~lL~s~~~~~~---~~ 517 (778)
T 3opb_A 451 KYILRTELISFLKREMHNLSPNCKQQVVRIIYNITRSK------NF----IPQLAQQGAVKIILEYLANKQDIGE---PI 517 (778)
T ss_dssp HHTTTTTHHHHHHHHGGGSCHHHHHHHHHHHHHHHTSG------GG----HHHHHHTTHHHHHHHHTTCC---CC---HH
T ss_pred HHHHHCcCHHHHHHHHcCCCHHHHHHHHHHHHHHcCCH------HH----HHHHHHCCCHHHHHHHHhcCCCcch---HH
Confidence 35578899999999999999999999999999998431 11 3456677888888888755433210 12
Q ss_pred hhhhHHHhhhhh-cCChhHHHHHHh---hhhHHHHHHHhhccCCCCc---------c--hhhHHHHHHH---HhhcC---
Q psy11496 227 VHNTLGIFENLC-ELKPDVIHDIGK---QGIIQWSLKRLKAKIPFDG---------N--KLYTSEILSI---LCQKN--- 285 (607)
Q Consensus 227 V~~~L~iiENl~-e~~p~~~~~l~~---~~LL~wLL~Rl~~~~~~D~---------N--k~YasEiL~I---llq~~--- 285 (607)
=.++...+=||+ +.+|.++ +.. .+.++-|+.-+......+. . -.| |.|-. |.+.+
T Consensus 518 k~~AA~ALArLlis~np~~~--f~~~~~~~aI~pLv~LL~~~~~~~~~~l~~~~~~~~l~~f--eAL~ALTNLAs~~~n~ 593 (778)
T 3opb_A 518 RILGCRALTRMLIFTNPGLI--FKKYSALNAIPFLFELLPRSTPVDDNPLHNDEQIKLTDNY--EALLALTNLASSETSD 593 (778)
T ss_dssp HHHHHHHHHHHHHTSCHHHH--SSSSCSTTHHHHHHHTSCCSSSCSSCC---CCCCCHHHHH--HHHHHHHHHHHCCSHH
T ss_pred HHHHHHHHHHHHhcCCHHHH--cCCCccccchHHHHHHcCCCCCcccccccccccccHHHHH--HHHHHHHHHhcCCccc
Confidence 234555555555 4567764 211 1456666666652111111 1 133 34333 34433
Q ss_pred -hhHHHHhhcc-ccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhCCHhhH-HHhhccc------hHHHHHHHHh
Q psy11496 286 -NENRKLLGDL-DGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLMLEENK-ERFLKGE------GLQLMNLMLR 356 (607)
Q Consensus 286 -~~~~~~l~~~-dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~~~~nk-~~F~e~e------GveLml~mL~ 356 (607)
++.|.++.+. +++..|...+.. + ....-.....++|++...|+.+ .+|...+ ++.+++.++.
T Consensus 594 ~E~~r~~Ii~~~ga~~~L~~LL~s-----~----n~~VrrAA~elI~NL~~~~e~i~~k~~~~~~~~~~~rL~lLV~Ll~ 664 (778)
T 3opb_A 594 GEEVCKHIVSTKVYWSTIENLMLD-----E----NVPLQRSTLELISNMMSHPLTIAAKFFNLENPQSLRNFNILVKLLQ 664 (778)
T ss_dssp HHHHHHHHHHSHHHHHHHHHGGGC-----S----SHHHHHHHHHHHHHHHTSGGGTGGGTSCCSSHHHHHHHHHHHHGGG
T ss_pred chHHHHHHHHhcCHHHHHHHHHhC-----C----CHHHHHHHHHHHHHHhCCcHHHHHHHHhhcCchhhccHHHHHHHHc
Confidence 2467777764 677777776642 1 1123334566778888888886 4664333 5889999997
Q ss_pred ccc-CCcCchhHHHHHhhcCCCCchhhhhHHhh-hchhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcCCCchh
Q psy11496 357 ERK-VSRNGSLKVLDHAICGPSGKDNANKFVDI-LGLRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRNCSGPQ 434 (607)
Q Consensus 357 ~~k-~~r~~AlkvlD~al~~~~~~~~c~kFVe~-~GLk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~l~~~~ 434 (607)
..- ..+..|--.|..++++ .+.+|..+++. .|++.++.++-.. ....+...+++-++++|..+.++..
T Consensus 665 s~D~~~r~AAagALAnLts~--~~~ia~~ll~~~~gi~~Ll~lL~~~--------~~~~~l~~R~~~~l~NL~~~~~~~~ 734 (778)
T 3opb_A 665 LSDVESQRAVAAIFANIATT--IPLIAKELLTKKELIENAIQVFADQ--------IDDIELRQRLLMLFFGLFEVIPDNG 734 (778)
T ss_dssp CSCHHHHHHHHHHHHHHHHH--CHHHHHHHTTCHHHHHHHHHHHHHT--------TTCHHHHHHHHHHHHHHHTTCCSTT
T ss_pred CCCHHHHHHHHHHHHHhcCC--ChHHHHHHHHccccHHHHHHHHhcc--------CCCHHHHHHHHHHHHHHHHhhccCC
Confidence 642 3455566677776652 47899999998 7999988866642 0235666778888898888776543
Q ss_pred hHHHHHHHhhcch
Q psy11496 435 RQRLLSKFTENDH 447 (607)
Q Consensus 435 r~Rll~KFvE~~~ 447 (607)
-.+.+.+|+++..
T Consensus 735 ~~~~~~~~~~~~~ 747 (778)
T 3opb_A 735 TNEVYPLLQENQK 747 (778)
T ss_dssp TTSCCHHHHSCHH
T ss_pred ChHHHHHHhcChH
Confidence 3456777776653
No 38
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=97.02 E-value=0.0058 Score=60.68 Aligned_cols=185 Identities=14% Similarity=0.119 Sum_probs=126.1
Q ss_pred ChHHHHHhhccCCc--hhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcchHHHHHHhhhhccCCchhhhhhhhhhH
Q psy11496 154 AVSSMLELVLHENT--DIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQVCALLVQNLERLDETVKEESDGVHNTL 231 (607)
Q Consensus 154 ~v~sL~~LLsHeNt--DIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~l~~lLv~nL~RldE~~~~e~~gV~~~L 231 (607)
.++.|+.+|.|++. ++-..+...|+-|+-.+. +. -..+++.+.+..||+-|..= ...--.++.
T Consensus 9 ~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~-----~~----r~~I~~~G~Ip~LV~lL~s~------~~~vq~~Aa 73 (233)
T 3tt9_A 9 TLERAVSMLEADHMLPSRISAAATFIQHECFQKS-----EA----RKRVNQLRGILKLLQLLKVQ------NEDVQRAVC 73 (233)
T ss_dssp CHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCH-----HH----HHHHHHTTHHHHHHHGGGCC------CHHHHHHHH
T ss_pred cHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCc-----HH----HHHHHHcCCHHHHHHHHcCC------CHHHHHHHH
Confidence 56888999999998 876666667777764321 11 23345678899999998541 233455677
Q ss_pred HHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHH--hhcChhHHHHhhccccHHHHHHHH-hhh
Q psy11496 232 GIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSIL--CQKNNENRKLLGDLDGIDILLQQL-AYY 308 (607)
Q Consensus 232 ~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Il--lq~~~~~~~~l~~~dgid~LL~~l-a~y 308 (607)
+.+-||..-.++.-..+++.+-++.|++-+.... ...-+-. ..+.| |...+.++..+++ +||..|.+.+ .+|
T Consensus 74 ~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~~~~-~~~~~e~---a~~aL~nLS~~~~~k~~i~~-~~i~~Lv~ll~~p~ 148 (233)
T 3tt9_A 74 GALRNLVFEDNDNKLEVAELNGVPRLLQVLKQTR-DLETKKQ---ITGLLWNLSSNDKLKNLMIT-EALLTLTENIIIPF 148 (233)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHHCC-CHHHHHH---HHHHHHHHHTSGGGHHHHHH-HHHHHHCCCCCHHH
T ss_pred HHHHHHHhCCHHHHHHHHHcCCHHHHHHHHccCC-CHHHHHH---HHHHHHHHHcChhhHHHHHh-ccHHHHHHHHhccc
Confidence 8888888656777788888887777777776421 1111222 23333 4667888988886 5788888754 233
Q ss_pred hcC---C---CCChHHHHHHHHHHHHHHhhhC-CHhhHHHhhccch-HHHHHHHHhcc
Q psy11496 309 KRH---D---PNTPEEQEMMENLFDTLCSCLM-LEENKERFLKGEG-LQLMNLMLRER 358 (607)
Q Consensus 309 rk~---D---p~~~eE~E~~eNlfd~L~slL~-~~~nk~~F~e~eG-veLml~mL~~~ 358 (607)
... + +......+..+|.-.||.++-. .+++|..+.+..| |+.++.+++..
T Consensus 149 sG~~~~~~~~~~~~~~~~v~~na~~~L~nLss~~~~~R~~~r~~~Gli~~Lv~~l~~~ 206 (233)
T 3tt9_A 149 SGWPEGDYPKANGLLDFDIFYNVTGCLRNMSSAGADGRKAMRRCDGLIDSLVHYVRGT 206 (233)
T ss_dssp HCCCGGGCCCCCTTCCHHHHHHHHHHHHHHTTSCHHHHHHHHTSTTHHHHHHHHHHHH
T ss_pred cCCcccccccccccchHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCcHHHHHHHHHhh
Confidence 221 1 1223456888899999999885 6799999999887 59999988863
No 39
>3grl_A General vesicular transport factor P115; vesicle transport, membrane trafficking, membrane tethering, fusion, snare, RAB GTPase, armadillo repeats; 2.00A {Bos taurus} PDB: 3gq2_A 2w3c_A
Probab=96.66 E-value=0.028 Score=63.59 Aligned_cols=223 Identities=15% Similarity=0.139 Sum_probs=140.2
Q ss_pred HHHHhhcc-cCCCchHH-HHh-cCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHH-hcchHHH
Q psy11496 133 IQELHAIA-TVPDLYPL-LVQ-LKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALL-DQQVCAL 208 (607)
Q Consensus 133 Ik~l~~La-~~P~LYp~-~v~-l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~-e~~l~~l 208 (607)
++-|.+|. ..|+-+-. +.. -++++.|+++|+..+--|-..++-+|.+||-... . +..++ -.+.++-
T Consensus 143 lqlL~~L~~~r~~~~Q~~Il~~p~gi~~Lv~lL~d~rE~iRneallLL~~Lt~~n~------~----iQklVAFEnaFe~ 212 (651)
T 3grl_A 143 VKLLTSLLKQLGPQVQQIILVSPMGVSRLMDLLADSREVIRNDGVLLLQALTRSNG------A----IQKIVAFENAFER 212 (651)
T ss_dssp HHHHHHHHHHSHHHHHHHHHHSTTHHHHHHGGGGCSSHHHHHHHHHHHHHHHTTCH------H----HHHHHHHTTHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHhCcccHHHHHHHHhCchHHHHHHHHHHHHHHhcCCH------H----HHHHHHHhccHHH
Confidence 55555544 35664333 443 3899999999999998899999999999997532 1 22222 2356666
Q ss_pred HHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccC-CC------CcchhhHHHHHHHH
Q psy11496 209 LVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKI-PF------DGNKLYTSEILSIL 281 (607)
Q Consensus 209 Lv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~-~~------D~Nk~YasEiL~Il 281 (607)
|++-+.. |..-+-..-|..||.++.||+..+|+...-|.+.+.++.|..=++.+. .+ ..|-.-+-+++.+|
T Consensus 213 Lf~Ii~~--Eg~~~Ggivv~DCL~ll~nLLr~N~sNQ~~FrEt~~i~~L~~LL~~~~~~~~W~~Qk~~N~~~~L~iIrlL 290 (651)
T 3grl_A 213 LLDIITE--EGNSDGGIVVEDCLILLQNLLKNNNSNQNFFKEGSYIQRMKPWFEVGDENSGWSAQKVTNLHLMLQLVRVL 290 (651)
T ss_dssp HHHHHHH--HTGGGSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTCGGGGGGGGCCCSCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHh--cCCCccchhHHHHHHHHHHHHhcCHHHHHHHHHcCCHHHHHHHhCCCccccccHHHHHHHHHHHHHHHHHH
Confidence 6665521 111123455789999999999999999888998876666654444332 11 13333344555556
Q ss_pred hhc------ChhHHHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhh-CCHhhHHHhhccc--------
Q psy11496 282 CQK------NNENRKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCL-MLEENKERFLKGE-------- 346 (607)
Q Consensus 282 lq~------~~~~~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL-~~~~nk~~F~e~e-------- 346 (607)
+.. ++.|+..+.+.+++..|++.+.. +..+. ........+++.+. ..+.|++.|.+.+
T Consensus 291 v~~~~~~~~t~~nQ~~~~~~g~l~~Ll~ll~~-----~~~p~--~i~~~Al~tla~~irgN~~~Q~~fa~~~vp~~~~~p 363 (651)
T 3grl_A 291 VSPNNPPGATSSCQKAMFQCGLLQQLCTILMA-----TGVPA--DILTETINTVSEVIRGCQVNQDYFASVNAPSNPPRP 363 (651)
T ss_dssp TCTTSCHHHHHHHHHHHHHTTHHHHHHHHHTC-----SSCCH--HHHHHHHHHHHHHHTTCHHHHHHHHHCEESSSSCEE
T ss_pred hCCCCCCCCCHHHHHHHHHCCCHHHHHHHHcc-----CCCCH--HHHHHHHHHHHHHHhCCHHHHHHHhhccCCCCCCcC
Confidence 533 55788888888889888886654 22222 22334455667777 5899999998765
Q ss_pred -hHHHHHHHHhcccC--CcCchhHHHHHhhc
Q psy11496 347 -GLQLMNLMLRERKV--SRNGSLKVLDHAIC 374 (607)
Q Consensus 347 -GveLml~mL~~~k~--~r~~AlkvlD~al~ 374 (607)
=+++++.|+..+.. -|..|..+|.+-+.
T Consensus 364 ~li~lL~~~~~~~~~~~lR~Aa~~cl~ay~~ 394 (651)
T 3grl_A 364 AIVVLLMSMVNERQPFVLRCAVLYCFQCFLY 394 (651)
T ss_dssp HHHHHHHHHTCTTSCHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHhcccccHHHHHHHHHHHHHHHh
Confidence 23444445443321 14446666666654
No 40
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=96.57 E-value=0.037 Score=54.91 Aligned_cols=189 Identities=15% Similarity=0.158 Sum_probs=122.8
Q ss_pred hhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHHHhh
Q psy11496 228 HNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQLAY 307 (607)
Q Consensus 228 ~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~la~ 307 (607)
.++...+-||..-++..-..+++.+.++.|++-++.. ...-+..|+..|.-|-..+++|+..+++.+||+.|++.|..
T Consensus 28 ~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~--~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~~ 105 (233)
T 3tt9_A 28 SAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQ--NEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLKQ 105 (233)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCC--CHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCC--CHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHcc
Confidence 4455667788865777777888888889999999753 44556666677877776789999999999999999999975
Q ss_pred hhcCCCCChHHHHHHHHHHHHHHhhhCCHhhHHHhhccchHHHHHHHHh-cc--c----CCc---CchhHHHHHhh----
Q psy11496 308 YKRHDPNTPEEQEMMENLFDTLCSCLMLEENKERFLKGEGLQLMNLMLR-ER--K----VSR---NGSLKVLDHAI---- 373 (607)
Q Consensus 308 yrk~Dp~~~eE~E~~eNlfd~L~slL~~~~nk~~F~e~eGveLml~mL~-~~--k----~~r---~~AlkvlD~al---- 373 (607)
. .+. +.-+|..-+|.++-..++||..+.+ +|+..+..++. .+ - +.+ ..-..+|-.++
T Consensus 106 ~-----~~~---~~~e~a~~aL~nLS~~~~~k~~i~~-~~i~~Lv~ll~~p~sG~~~~~~~~~~~~~~~~v~~na~~~L~ 176 (233)
T 3tt9_A 106 T-----RDL---ETKKQITGLLWNLSSNDKLKNLMIT-EALLTLTENIIIPFSGWPEGDYPKANGLLDFDIFYNVTGCLR 176 (233)
T ss_dssp C-----CCH---HHHHHHHHHHHHHHTSGGGHHHHHH-HHHHHHCCCCCHHHHCCCGGGCCCCCTTCCHHHHHHHHHHHH
T ss_pred C-----CCH---HHHHHHHHHHHHHHcChhhHHHHHh-ccHHHHHHHHhccccCCcccccccccccchHHHHHHHHHHHH
Confidence 1 222 2344555666777778999999886 58776654332 11 1 111 12233433222
Q ss_pred c-CCCCchhhhhHHhhhch-hhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHhhhcCCC
Q psy11496 374 C-GPSGKDNANKFVDILGL-RTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKANMLRNCS 431 (607)
Q Consensus 374 ~-~~~~~~~c~kFVe~~GL-k~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaSLlr~l~ 431 (607)
. ...++++...+.+..|+ ..+ .-+++..-...+ ...+..||.+.++..|...++
T Consensus 177 nLss~~~~~R~~~r~~~Gli~~L-v~~l~~~~~~~~---~~~k~~En~v~~L~nLs~~~~ 232 (233)
T 3tt9_A 177 NMSSAGADGRKAMRRCDGLIDSL-VHYVRGTIADYQ---PDDKATENCVCILHNLSYQLE 232 (233)
T ss_dssp HHTTSCHHHHHHHHTSTTHHHHH-HHHHHHHHHTTC---TTCHHHHHHHHHHHHHCCCCC
T ss_pred HHhcCCHHHHHHHHHCCCcHHHH-HHHHHhhhhccc---chhHHHHHHHHHHHHHHhhhc
Confidence 1 11357899999999886 665 334432100011 245678999999988865543
No 41
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=96.31 E-value=0.04 Score=61.82 Aligned_cols=200 Identities=19% Similarity=0.167 Sum_probs=131.3
Q ss_pred cCCCCchhhhhcHHhHHHHHHHHhhcccCCCchHHHHhcCChHHHH-HhhccCCchhHHHHHHHhhhhccccccccchhh
Q psy11496 114 KFPDNAEKFMESEIELHTTIQELHAIATVPDLYPLLVQLKAVSSML-ELVLHENTDIAVAVVDLLQELTDVDVLNESEEG 192 (607)
Q Consensus 114 K~~d~P~KFmdSE~dLd~~Ik~l~~La~~P~LYp~~v~l~~v~sL~-~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~ 192 (607)
+.||-=.|. .+...++.|+..|..=..+++.|+|..++ .||+++|.+|..++...|+-|.-..
T Consensus 44 ~S~~~~~r~--------~A~~al~~l~~~~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL~~~~-------- 107 (684)
T 4gmo_A 44 KSPDAKSRT--------TAAGAIANIVQDAKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVLAQEE-------- 107 (684)
T ss_dssp SSSCCSHHH--------HHHHHHHHHTTSHHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHS--------
T ss_pred CCCCHHHHH--------HHHHHHHHHHcCcHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHhhc--------
Confidence 455544554 47888999999999999999999998865 5899999999999999999887431
Q ss_pred HHHHHHHHHhcchHHHHHHhhhhccCC-----------chhhhhhh----hhhHHHhhhhhcCChhHHHHHHhhhhHHHH
Q psy11496 193 TESLLTALLDQQVCALLVQNLERLDET-----------VKEESDGV----HNTLGIFENLCELKPDVIHDIGKQGIIQWS 257 (607)
Q Consensus 193 ~~~lv~aL~e~~l~~lLv~nL~RldE~-----------~~~e~~gV----~~~L~iiENl~e~~p~~~~~l~~~~LL~wL 257 (607)
...+.+.|+..+++..|...|....+. .+..+.-+ .++++++-||++........+.+.+.++-+
T Consensus 108 g~d~~~~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~~~l~~l 187 (684)
T 4gmo_A 108 EADFCVHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATKQTILRL 187 (684)
T ss_dssp CHHHHHHHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCHHHHHH
T ss_pred CchHHHHHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhcccHHHH
Confidence 234466677777777776666544331 11222223 256777788888777777778777777777
Q ss_pred HHHhhccCCCC-cchhhHHHHHHHHhhcChhHHHHhhccccHHHHHHHHhhhh-cCCCCChHHHHHHHHHHHHHH
Q psy11496 258 LKRLKAKIPFD-GNKLYTSEILSILCQKNNENRKLLGDLDGIDILLQQLAYYK-RHDPNTPEEQEMMENLFDTLC 330 (607)
Q Consensus 258 L~Rl~~~~~~D-~Nk~YasEiL~Illq~~~~~~~~l~~~dgid~LL~~la~yr-k~Dp~~~eE~E~~eNlfd~L~ 330 (607)
+..+....... .-...|.+.|..|...++.....+..... -.+++.+.... ..++..-.-.-.+.|+|.++.
T Consensus 188 ~~~L~~~~~~~~~v~~~a~~~L~~ls~dn~~~~~~i~~~~~-~~~~~~ll~~~~~~~~~~~la~giL~Ni~~~~~ 261 (684)
T 4gmo_A 188 LFRLISADIAPQDIYEEAISCLTTLSEDNLKVGQAITDDQE-THVYDVLLKLATGTDPRAVMACGVLHNVFTSLQ 261 (684)
T ss_dssp HHHHHHHCCSCHHHHHHHHHHHHHHHTTCHHHHHHHHTCCS-SCHHHHHHHHHHSSCTTHHHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCcHHHHHHHHHHHHHHhccCHHHHHHHHhcch-HHHHHHHHHHhcCCcHHHHHHHHHHHhHhhhhh
Confidence 77765433222 23445667777887888887777775332 22333333222 344445556677888876543
No 42
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=94.26 E-value=1 Score=47.64 Aligned_cols=189 Identities=12% Similarity=0.117 Sum_probs=112.8
Q ss_pred hHHHHHHHhhccCCCCcchhhH-HHHHHHHhhcCh-hHHHHhhccccHHHHHHHHhhhhcCCCCC--hHHHHHHHHHHHH
Q psy11496 253 IIQWSLKRLKAKIPFDGNKLYT-SEILSILCQKNN-ENRKLLGDLDGIDILLQQLAYYKRHDPNT--PEEQEMMENLFDT 328 (607)
Q Consensus 253 LL~wLL~Rl~~~~~~D~Nk~Ya-sEiL~Illq~~~-~~~~~l~~~dgid~LL~~la~yrk~Dp~~--~eE~E~~eNlfd~ 328 (607)
=-.|.+++|+.. ...++++. -+-|.+-|.+++ ...+.|+ .+|+..|+..|+.+..+.... ......-..++-|
T Consensus 67 sP~~yi~~L~~~--~~~~kl~~~L~sL~v~Lrt~~~sWV~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~C 143 (383)
T 3eg5_B 67 SAMMYIQELRSG--LRDMHLLSCLESLRVSLTSHPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRC 143 (383)
T ss_dssp CHHHHHHHHTTT--CCHHHHHHHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHH
T ss_pred CHHHHHHHHHhc--ccchhHHHHHHHHHHHHhhCccHHHHHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHH
Confidence 356777777653 33445542 234677676554 5567777 899999999998875443322 3344566678899
Q ss_pred HHhhhCCHhhHHHhhc-cchHHHHHHHHhccc-CCcCchhHHHHHhhcCCCCchh-hhhHHhhhc------hhhhHHhhh
Q psy11496 329 LCSCLMLEENKERFLK-GEGLQLMNLMLRERK-VSRNGSLKVLDHAICGPSGKDN-ANKFVDILG------LRTIFPLFM 399 (607)
Q Consensus 329 L~slL~~~~nk~~F~e-~eGveLml~mL~~~k-~~r~~AlkvlD~al~~~~~~~~-c~kFVe~~G------Lk~lF~lfM 399 (607)
|-+++....+...+.. .++|..+...|.... ..+..|+++|..+|.. .+|.| ..+.+++.- =..-|..+|
T Consensus 144 LkalmN~~~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~aleLL~~lc~~-~~~~gG~~~VL~Al~~~~~~~e~~RF~~lv 222 (383)
T 3eg5_B 144 LKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCIL-PQPEDMNERVLEAMTERAEMDEVERFQPLL 222 (383)
T ss_dssp HHHHTSSHHHHHHHHTCSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHTC-CSSTTHHHHHHHHHHHHHHHHTSCTTHHHH
T ss_pred HHHHhcchhhHHHHHcChHHHHHHHHHhCCCchHHHHHHHHHHHHHHhC-cCcCCcHHHHHHHHHHHHHhCCCCcHHHHH
Confidence 9999988888766554 556666666555443 4466689999887764 34454 888777731 111132223
Q ss_pred cCcccCcCCCcchhhhhHHHHHHHHhhhcCCCc-hhhHHHHHHHhhcchhhH
Q psy11496 400 KTPKKNRRKIITVEEHEEHVVSIKANMLRNCSG-PQRQRLLSKFTENDHEKV 450 (607)
Q Consensus 400 kk~kk~kk~~~~~~e~~Eh~~siiaSLlr~l~~-~~r~Rll~KFvE~~~eK~ 450 (607)
.-- +. ....+..-..++.|.+++..++. ..|..+-+.|......++
T Consensus 223 ~~L---~~--~~~~e~~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~i 269 (383)
T 3eg5_B 223 DGL---KS--GTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQV 269 (383)
T ss_dssp HTT---ST--TSCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHH
T ss_pred HHH---Hc--cCcHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHCChHHH
Confidence 211 00 12344444556677777776654 456667777776654444
No 43
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=93.23 E-value=1.9 Score=42.12 Aligned_cols=187 Identities=12% Similarity=0.130 Sum_probs=104.3
Q ss_pred HHHHHHhhccCCCCcchhh-HHHHHHHHhhcCh-hHHHHhhccccHHHHHHHHhhhhcCCCCC--hHHHHHHHHHHHHHH
Q psy11496 255 QWSLKRLKAKIPFDGNKLY-TSEILSILCQKNN-ENRKLLGDLDGIDILLQQLAYYKRHDPNT--PEEQEMMENLFDTLC 330 (607)
Q Consensus 255 ~wLL~Rl~~~~~~D~Nk~Y-asEiL~Illq~~~-~~~~~l~~~dgid~LL~~la~yrk~Dp~~--~eE~E~~eNlfd~L~ 330 (607)
.|.+++|+.. .+..+.. .-+-|.|-|.+++ ...+.|+ .+|++.|+..|.....+.... ..+......+.-||-
T Consensus 3 ~~yi~~L~~~--~~~~~~~~~L~~L~v~Lrt~~~~Wv~~F~-~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLk 79 (233)
T 2f31_A 3 MMYIQELRSG--LRDMHLLSCLESLRVSLNNNPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLK 79 (233)
T ss_dssp HHHHHHHTTT--CCHHHHHHHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc--cchHHHHHHHHHHhHhHhcCCcHHHHHHH-HhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHH
Confidence 4667777653 2222221 1134666675554 4566774 799999999998875433222 235677778999999
Q ss_pred hhhCCHhhHHHhhc-cchHHHHHHHHhccc-CCcCchhHHHHHhhcCCCCchh-hhhHHhhhch------hhhHHhhhcC
Q psy11496 331 SCLMLEENKERFLK-GEGLQLMNLMLRERK-VSRNGSLKVLDHAICGPSGKDN-ANKFVDILGL------RTIFPLFMKT 401 (607)
Q Consensus 331 slL~~~~nk~~F~e-~eGveLml~mL~~~k-~~r~~AlkvlD~al~~~~~~~~-c~kFVe~~GL------k~lF~lfMkk 401 (607)
+++..+.+...+.. .+++..+...|.... ..+..|+++|.++|. +.++.+ ..+.+++.-- +.-|..+|.-
T Consensus 80 almn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~leLL~~lc~-~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~ 158 (233)
T 2f31_A 80 AFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCI-LPQPEDMNERVLEAMTERAEMDEVERFQPLLDG 158 (233)
T ss_dssp HHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHHHHHHHHHT-CSSSSCHHHHHHHHHHHHHHHHTSCTTHHHHHT
T ss_pred HHhCChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHh-CCCCCChHHHHHHHHHHHHHhCCcchHHHHHHH
Confidence 99989988777665 445555555444332 345568999988665 344456 6666555321 1112222210
Q ss_pred cccCcCCCcchhhhhHHHHHHHHhhhcCCCc-hhhHHHHHHHhhcchhhH
Q psy11496 402 PKKNRRKIITVEEHEEHVVSIKANMLRNCSG-PQRQRLLSKFTENDHEKV 450 (607)
Q Consensus 402 ~kk~kk~~~~~~e~~Eh~~siiaSLlr~l~~-~~r~Rll~KFvE~~~eK~ 450 (607)
- +. ....+..-..++.|.+++...+. +.|..+-+.|......++
T Consensus 159 l---~~--~~~~e~~~~~m~lIN~li~~~~dl~~R~~lR~ef~~~Gl~~i 203 (233)
T 2f31_A 159 L---KS--GTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQV 203 (233)
T ss_dssp T---ST--TSCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHTTHHHH
T ss_pred H---hc--CChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHH
Confidence 0 00 12233444455566666666554 456666666665544333
No 44
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=92.97 E-value=2.6 Score=44.54 Aligned_cols=187 Identities=13% Similarity=0.131 Sum_probs=110.5
Q ss_pred HHHHHHhhccCCCCcchhh-HHHHHHHHhhcCh-hHHHHhhccccHHHHHHHHhhhhcCCCCC--hHHHHHHHHHHHHHH
Q psy11496 255 QWSLKRLKAKIPFDGNKLY-TSEILSILCQKNN-ENRKLLGDLDGIDILLQQLAYYKRHDPNT--PEEQEMMENLFDTLC 330 (607)
Q Consensus 255 ~wLL~Rl~~~~~~D~Nk~Y-asEiL~Illq~~~-~~~~~l~~~dgid~LL~~la~yrk~Dp~~--~eE~E~~eNlfd~L~ 330 (607)
.|.+++|+.. . ...++. .-+-|.|-|.+++ .....|+ .+|++.|+..|.+........ ..+......+.-||-
T Consensus 7 ~~yv~~L~~~-~-~~~~~~~~L~~L~v~Lrt~~~~Wv~~F~-~~Gl~~Ll~~L~~~~~~~~~~~~~~d~~~~~~~l~CLk 83 (386)
T 2bnx_A 7 MMYIQELRSG-L-RDMHLLSCLESLRVSLNNNPVSWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLK 83 (386)
T ss_dssp HHHHHHHTSC-C-CHHHHHHHHHHHHHHHHHSCHHHHHHHH-HHHHHHHHHHHHHHHTCCTTTCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc-c-chHHHHHHHHHHhHHHhcCCcHHHHHHH-HhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHH
Confidence 5777888763 2 223221 1134666676554 4566676 799999999998875433222 345677778999999
Q ss_pred hhhCCHhhHHHhhcc-chHHHHHHHHhccc-CCcCchhHHHHHhhcCCCCchh-hhhHHhhhchhh------hHHhhhcC
Q psy11496 331 SCLMLEENKERFLKG-EGLQLMNLMLRERK-VSRNGSLKVLDHAICGPSGKDN-ANKFVDILGLRT------IFPLFMKT 401 (607)
Q Consensus 331 slL~~~~nk~~F~e~-eGveLml~mL~~~k-~~r~~AlkvlD~al~~~~~~~~-c~kFVe~~GLk~------lF~lfMkk 401 (607)
+++....+...+... .++..+...|.... ..+..++++|..+|. +.++.+ ..+.+++.---. -|..+|.-
T Consensus 84 almN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vleLL~alc~-~~~~~G~~~~VL~Al~~~~~~~e~~RF~~lv~~ 162 (386)
T 2bnx_A 84 AFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAAKLLSALCI-LPQPEDMNERVLEAMTERAEMDEVERFQPLLDG 162 (386)
T ss_dssp HHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHHHHHHHHHT-CCSSTTHHHHHHHHHHHHHHHHTSCTTHHHHHH
T ss_pred HHhCCHHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHHHHHHHHHc-CCCCCChHHHHHHHHHHHHHhCchhhHHHHHHH
Confidence 999898887766554 56655555554332 345568899988665 444455 666666543111 11112210
Q ss_pred cccCcCCCcchhhhhHHHHHHHHhhhcCCCc-hhhHHHHHHHhhcchhhH
Q psy11496 402 PKKNRRKIITVEEHEEHVVSIKANMLRNCSG-PQRQRLLSKFTENDHEKV 450 (607)
Q Consensus 402 ~kk~kk~~~~~~e~~Eh~~siiaSLlr~l~~-~~r~Rll~KFvE~~~eK~ 450 (607)
.+ .....+..-..++.|.+++..++. ..|..+-+.|+.....++
T Consensus 163 ---l~--~~~~~e~~~a~m~lIN~lv~~~~dl~~R~~LR~Ef~~~GL~~i 207 (386)
T 2bnx_A 163 ---LK--SGTSIALKVGCLQLINALITPAEELDFRVHIRSELMRLGLHQV 207 (386)
T ss_dssp ---TS--TTSCHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTTHHHH
T ss_pred ---HH--cCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCChHHH
Confidence 00 012344555566777777777765 456666666766554443
No 45
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=88.68 E-value=6.8 Score=41.17 Aligned_cols=167 Identities=15% Similarity=0.140 Sum_probs=113.0
Q ss_pred HHhHHHHHHHHhh-cccCCCchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccccchhhHHHHHHHHHhcc
Q psy11496 126 EIELHTTIQELHA-IATVPDLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLNESEEGTESLLTALLDQQ 204 (607)
Q Consensus 126 E~dLd~~Ik~l~~-La~~P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~e~~e~~~~lv~aL~e~~ 204 (607)
.-++-..+.+|+- ++..+++=++||..+++..|+....+-.-.+-.=++.-|++|-+- ..+++.++. ...
T Consensus 132 ~~~lr~aLfsLk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~~gN~q~Y~L~AL~~LM~~------v~Gm~gvvs---~~~ 202 (339)
T 3dad_A 132 GPELRRSLFSLKQIFQEDKDLVPEFVHSEGLSCLIRVGAAADHNYQSYILRALGQLMLF------VDGMLGVVA---HSD 202 (339)
T ss_dssp HHHHHHHHHHHHHHHHTCTTHHHHHHHTTHHHHHHHHHTTSCHHHHHHHHHHHHHHTTS------HHHHHHHHH---CHH
T ss_pred cHHHHHHHHHHHHHhhcchHHHHHHHHhccHHHHHHHHHhcChHHHHHHHHHHHHHHhc------cccccchhC---CHH
Confidence 3457788888887 888999999999999999999999776666677777788887763 346666665 334
Q ss_pred hHHHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHh--------hh--hHHHHHHHhhccCCCCc-chhh
Q psy11496 205 VCALLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGK--------QG--IIQWSLKRLKAKIPFDG-NKLY 273 (607)
Q Consensus 205 l~~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~--------~~--LL~wLL~Rl~~~~~~D~-Nk~Y 273 (607)
.+.-+++-+. + .++.=+-.+|+|++++++..++.+..+.+ ++ .++-++..+++++..|. -.+|
T Consensus 203 fI~~lyslv~----s--~~~~V~k~AL~LL~v~V~~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~~~~~D~elq~~ 276 (339)
T 3dad_A 203 TIQWLYTLCA----S--LSRLVVKTALKLLLVFVEYSENNAPLFIRAVNSVASTTGAPPWANLVSILEEKNGADPELLVY 276 (339)
T ss_dssp HHHHHHHGGG----C--SCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTTTTSCCHHHHHH
T ss_pred HHHHHHHHHc----C--ccHHHHHHHHHHHHHHHccCcccchHHHHHHHHhhhccCCCcHHHHHHHHhccCCCCHHHHHH
Confidence 4455555443 2 45777888899999999988754433322 11 47888899987654443 4678
Q ss_pred HHHHHHHHhhcCh--hHHHHhh---ccccHHHHHHH-Hhh
Q psy11496 274 TSEILSILCQKNN--ENRKLLG---DLDGIDILLQQ-LAY 307 (607)
Q Consensus 274 asEiL~Illq~~~--~~~~~l~---~~dgid~LL~~-la~ 307 (607)
|-=++.-+++.-+ ..+..+. +.-||+..+++ +++
T Consensus 277 amtLIN~lL~~apd~d~~~di~d~Le~~gi~~~i~r~l~~ 316 (339)
T 3dad_A 277 TVTLINKTLAALPDQDSFYDVTDALEQQGMEALVQRHLGT 316 (339)
T ss_dssp HHHHHHHHHHHCSSHHHHHHHHHHHHHTTHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCCChhHHHHHHHHHHHccHHHHHHHHHhc
Confidence 7666777776654 2222222 23457655554 444
No 46
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=80.96 E-value=10 Score=42.49 Aligned_cols=188 Identities=12% Similarity=0.126 Sum_probs=110.2
Q ss_pred HHhcchHHHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHH
Q psy11496 200 LLDQQVCALLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILS 279 (607)
Q Consensus 200 L~e~~l~~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~ 279 (607)
+.+.+++.+| +. |...+.+++.+. ++.+-||++ +|+....+...+++.-++.++-. ++...-+..|+..|.
T Consensus 31 ~~~~~i~Pll-~~---L~S~~~~~r~~A---~~al~~l~~-~~~~~~l~~~~~~v~~ll~~lL~-D~~~~Vr~~A~gaLr 101 (684)
T 4gmo_A 31 LREDKILPVL-KD---LKSPDAKSRTTA---AGAIANIVQ-DAKCRKLLLREQVVHIVLTETLT-DNNIDSRAAGWEILK 101 (684)
T ss_dssp HHHHTTHHHH-HH---HSSSCCSHHHHH---HHHHHHHTT-SHHHHHHHHHTTHHHHHHHTTTT-CSCHHHHHHHHHHHH
T ss_pred cchhhHHHHH-HH---cCCCCHHHHHHH---HHHHHHHHc-CcHHHHHHHHcCCHHHHHHHHcC-CCCHHHHHHHHHHHH
Confidence 4445666654 44 445566777774 444557887 88888888888877777766432 234456777878888
Q ss_pred HHhhc-ChhHHHHhhccccHHHHHHHHhhh----hcCCCC----ChHHHH----HHHHHHHHHHhhh-CCHhhHHHhhcc
Q psy11496 280 ILCQK-NNENRKLLGDLDGIDILLQQLAYY----KRHDPN----TPEEQE----MMENLFDTLCSCL-MLEENKERFLKG 345 (607)
Q Consensus 280 Illq~-~~~~~~~l~~~dgid~LL~~la~y----rk~Dp~----~~eE~E----~~eNlfd~L~slL-~~~~nk~~F~e~ 345 (607)
-|.+. .+..+..+...+++..|+..+..+ ....+. ....+. +.+|+..+|.++- .+......+...
T Consensus 102 nL~~~~g~d~~~~l~~~~il~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lL~~L~e~s~~~~~~v~~~ 181 (684)
T 4gmo_A 102 VLAQEEEADFCVHLYRLDVLTAIEHAAKAVLETLTTSEPPFSKLLKAQQRLVWDITGSLLVLIGLLALARDEIHEAVATK 181 (684)
T ss_dssp HHHHHSCHHHHHHHHHTTHHHHHHHHHHHHHHHHHCBTTBGGGSCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTC
T ss_pred HHHhhcCchHHHHHHHcChHHHHHHHHHhhHHHHhhhccccccccHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhc
Confidence 87654 567888888878777776655432 222221 222333 3455555555544 356667788888
Q ss_pred chHHHHHHHHhcc-cCCcC---chhHHHHHhhcCCCCchhhhhHHhhhchhhhHHhhh
Q psy11496 346 EGLQLMNLMLRER-KVSRN---GSLKVLDHAICGPSGKDNANKFVDILGLRTIFPLFM 399 (607)
Q Consensus 346 eGveLml~mL~~~-k~~r~---~AlkvlD~al~~~~~~~~c~kFVe~~GLk~lF~lfM 399 (607)
.++..++..|... ..... .|..+|-.++. +.++..+.+.+. |.-.+|.+++
T Consensus 182 ~~l~~l~~~L~~~~~~~~~v~~~a~~~L~~ls~--dn~~~~~~i~~~-~~~~~~~~ll 236 (684)
T 4gmo_A 182 QTILRLLFRLISADIAPQDIYEEAISCLTTLSE--DNLKVGQAITDD-QETHVYDVLL 236 (684)
T ss_dssp HHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHT--TCHHHHHHHHTC-CSSCHHHHHH
T ss_pred ccHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhc--cCHHHHHHHHhc-chHHHHHHHH
Confidence 8887777666543 22222 23444433333 345666666664 4444445444
No 47
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=78.01 E-value=15 Score=38.63 Aligned_cols=152 Identities=11% Similarity=0.131 Sum_probs=95.5
Q ss_pred HHHHhhcChhHHHHhhccccHHHHHHHHhhhhcCCCCChHHHHHHHHHHHHHHhhhCCHhhHHHhh-ccchHHHHHHHHh
Q psy11496 278 LSILCQKNNENRKLLGDLDGIDILLQQLAYYKRHDPNTPEEQEMMENLFDTLCSCLMLEENKERFL-KGEGLQLMNLMLR 356 (607)
Q Consensus 278 L~Illq~~~~~~~~l~~~dgid~LL~~la~yrk~Dp~~~eE~E~~eNlfd~L~slL~~~~nk~~F~-e~eGveLml~mL~ 356 (607)
|+-++|.....+.-|...+|+..|+..+..- ..++..-++-+|-.++....+..-+. ..+.|.-+..++.
T Consensus 142 Lk~~~q~D~~Fa~EFI~~~GL~~Li~vi~~~---------~gN~q~Y~L~AL~~LM~~v~Gm~gvvs~~~fI~~lyslv~ 212 (339)
T 3dad_A 142 LKQIFQEDKDLVPEFVHSEGLSCLIRVGAAA---------DHNYQSYILRALGQLMLFVDGMLGVVAHSDTIQWLYTLCA 212 (339)
T ss_dssp HHHHHHTCTTHHHHHHHTTHHHHHHHHHTTS---------CHHHHHHHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHGGG
T ss_pred HHHHhhcchHHHHHHHHhccHHHHHHHHHhc---------ChHHHHHHHHHHHHHHhccccccchhCCHHHHHHHHHHHc
Confidence 5555677788888999999999999988652 33445556777788877777765554 4455555555555
Q ss_pred cc-cCCcCchhHHHHHhhcCCCCchhhhhHHhhhc----------hhhhHHhhhcCcccCcCCCcchhhhhHHHHHHHHh
Q psy11496 357 ER-KVSRNGSLKVLDHAICGPSGKDNANKFVDILG----------LRTIFPLFMKTPKKNRRKIITVEEHEEHVVSIKAN 425 (607)
Q Consensus 357 ~~-k~~r~~AlkvlD~al~~~~~~~~c~kFVe~~G----------Lk~lF~lfMkk~kk~kk~~~~~~e~~Eh~~siiaS 425 (607)
.. +.--..|+++|-..+. .++.|+..+.++-. +..+..++-. +.....+..-|++..|.+
T Consensus 213 s~~~~V~k~AL~LL~v~V~--~se~~~~lv~~av~~v~~~~~~~p~~~Lv~~L~~-------~~~~D~elq~~amtLIN~ 283 (339)
T 3dad_A 213 SLSRLVVKTALKLLLVFVE--YSENNAPLFIRAVNSVASTTGAPPWANLVSILEE-------KNGADPELLVYTVTLINK 283 (339)
T ss_dssp CSCHHHHHHHHHHHHHHHH--HCGGGHHHHHHHHHHHHHHHCCCTTHHHHHHHTT-------TTSCCHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHc--cCcccchHHHHHHHHhhhccCCCcHHHHHHHHhc-------cCCCCHHHHHHHHHHHHH
Confidence 31 1223347888877765 24557777666544 3333221111 112456777799999999
Q ss_pred hhcCCCchh-hHHHHHHHhhcch
Q psy11496 426 MLRNCSGPQ-RQRLLSKFTENDH 447 (607)
Q Consensus 426 Llr~l~~~~-r~Rll~KFvE~~~ 447 (607)
++..+++.. +.-++..+-+...
T Consensus 284 lL~~apd~d~~~di~d~Le~~gi 306 (339)
T 3dad_A 284 TLAALPDQDSFYDVTDALEQQGM 306 (339)
T ss_dssp HHHHCSSHHHHHHHHHHHHHTTH
T ss_pred HHhcCCChhHHHHHHHHHHHccH
Confidence 999988753 4444444444443
No 48
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=67.67 E-value=76 Score=35.51 Aligned_cols=50 Identities=16% Similarity=0.258 Sum_probs=39.2
Q ss_pred HHHHHhhcccC--CCchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhc
Q psy11496 132 TIQELHAIATV--PDLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELT 181 (607)
Q Consensus 132 ~Ik~l~~La~~--P~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELt 181 (607)
.+..+..++.. ++.-|.+..-++++.++.+|.|++.++..+++.++..++
T Consensus 606 ~l~~l~~l~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~~vr~~a~~~l~~l~ 657 (852)
T 4fdd_A 606 ALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLT 657 (852)
T ss_dssp HHHHHHHHHHHHGGGGHHHHHTCCHHHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHhHHHHhcCCcHHHHHHHHhCCCChhHHHHHHHHHHHHH
Confidence 34455555442 556666667789999999999999999999999999988
No 49
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=58.64 E-value=41 Score=35.36 Aligned_cols=215 Identities=17% Similarity=0.178 Sum_probs=115.9
Q ss_pred HHHHHHHhcchHHHHHHhhhhccCCc-----hhhhhhhhhhHHHhhhhhcCChhHHHHHHh-hhhHHHHHHHhhccCCCC
Q psy11496 195 SLLTALLDQQVCALLVQNLERLDETV-----KEESDGVHNTLGIFENLCELKPDVIHDIGK-QGIIQWSLKRLKAKIPFD 268 (607)
Q Consensus 195 ~lv~aL~e~~l~~lLv~nL~RldE~~-----~~e~~gV~~~L~iiENl~e~~p~~~~~l~~-~~LL~wLL~Rl~~~~~~D 268 (607)
..|+.++ ++.+..|+..|.+++... +.|..--|.++..+-.++.... -...+.. ...+.|+..=+..+ .-
T Consensus 101 sWV~~F~-~~Gl~~Ll~iL~~~~~~~~~~~~~~d~~~q~~~l~CLkalmN~~~-G~~~vl~~~~~i~~l~~~L~s~--~~ 176 (383)
T 3eg5_B 101 SWVQTFG-AEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKF-GIKTMLETEEGILLLVRAMDPA--VP 176 (383)
T ss_dssp HHHHHHH-HHHHHHHHHHHHHHHTCC-------CHHHHHHHHHHHHHHTSSHH-HHHHHHTCSSHHHHHHHTCCTT--SH
T ss_pred HHHHHHH-HccHHHHHHHHHHHhhccccccchhhHHHHHHHHHHHHHHhcchh-hHHHHHcChHHHHHHHHHhCCC--ch
Confidence 3466666 678899999999886432 3355666777877777776333 3344444 45888888777653 33
Q ss_pred cchhhHHHHHHHHhhcCh-hHHHHhhccccHHHHHHHHhhhhcC-CC----------CChHHHHHHHHHHHHHHhhhCCH
Q psy11496 269 GNKLYTSEILSILCQKNN-ENRKLLGDLDGIDILLQQLAYYKRH-DP----------NTPEEQEMMENLFDTLCSCLMLE 336 (607)
Q Consensus 269 ~Nk~YasEiL~Illq~~~-~~~~~l~~~dgid~LL~~la~yrk~-Dp----------~~~eE~E~~eNlfd~L~slL~~~ 336 (607)
.-+..+.|+|+.++--+. . +|.+.+|+.+..|+.. ++ ..+...+|+-.+...+=+++..+
T Consensus 177 ~~~~~aleLL~~lc~~~~~~--------gG~~~VL~Al~~~~~~~e~~RF~~lv~~L~~~~~~e~~~~~m~lIN~li~~~ 248 (383)
T 3eg5_B 177 NMMIDAAKLLSALCILPQPE--------DMNERVLEAMTERAEMDEVERFQPLLDGLKSGTSIALKVGCLQLINALITPA 248 (383)
T ss_dssp HHHHHHHHHHHHHHTCCSST--------THHHHHHHHHHHHHHHHTSCTTHHHHHTTSTTSCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHhCcCcC--------CcHHHHHHHHHHHHHhCCCCcHHHHHHHHHccCcHHHHHHHHHHHHHHHcCC
Confidence 456678899988865432 2 2344455555444311 00 11245677766665555555544
Q ss_pred hh---HHHh---hccchHHHHHHHHhcccCC-cCchhHHHHHhhcCCCCchhhhhH----HhhhchhhhHHhhhcCcccC
Q psy11496 337 EN---KERF---LKGEGLQLMNLMLRERKVS-RNGSLKVLDHAICGPSGKDNANKF----VDILGLRTIFPLFMKTPKKN 405 (607)
Q Consensus 337 ~n---k~~F---~e~eGveLml~mL~~~k~~-r~~AlkvlD~al~~~~~~~~c~kF----Ve~~GLk~lF~lfMkk~kk~ 405 (607)
++ |..+ ...-|+.=++.-|+..... =..-+++|+..... +..+-.++| ++..-..-+|..+..+-+
T Consensus 249 ~dl~~R~~lR~ef~~~Gl~~il~~lr~~~~~~L~~Qi~~fe~~~~e-D~~el~~r~~~~~~d~~d~~~~~~~l~~~~~-- 325 (383)
T 3eg5_B 249 EELDFRVHIRSELMRLGLHQVLQELREIENEDMKVQLCVFDEQGDE-DFFDLKGRLDDIRMEMDDFGEVFQIILNTVK-- 325 (383)
T ss_dssp CCHHHHHHHHHHHHHTTHHHHHHHHTTSCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHCCSHHHHHHHHHHHTT--
T ss_pred CCHHHHHHHHHHHHHCChHHHHHHHhcCCChhHHHHHHHHHHHHHH-hHHHHHhhccccCcCcCCHHHHHHHHHHHhc--
Confidence 43 2222 2255665555545542110 00025566554321 122222333 222233445665554321
Q ss_pred cCCCcchhhhhHHHHHHHHhhhcCC
Q psy11496 406 RRKIITVEEHEEHVVSIKANMLRNC 430 (607)
Q Consensus 406 kk~~~~~~e~~Eh~~siiaSLlr~l 430 (607)
......|.+||+..|+...
T Consensus 326 ------~t~a~~~flSiLQhLlli~ 344 (383)
T 3eg5_B 326 ------DSKAEPHFLSILQHLLLVR 344 (383)
T ss_dssp ------TSTTHHHHHHHHHHTTCSC
T ss_pred ------CCcchHHHHHHHHHHHhcc
Confidence 2244789999999997654
No 50
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=54.73 E-value=1e+02 Score=27.59 Aligned_cols=30 Identities=23% Similarity=0.325 Sum_probs=16.6
Q ss_pred ChHHHHHhhccCCchhHHHHHHHhhhhccc
Q psy11496 154 AVSSMLELVLHENTDIAVAVVDLLQELTDV 183 (607)
Q Consensus 154 ~v~sL~~LLsHeNtDIai~vi~lL~ELtD~ 183 (607)
+++.|+.+|.|+|..+...++..|..+-++
T Consensus 46 ~~~~L~~~l~~~~~~vr~~a~~~L~~~~~~ 75 (201)
T 3ltj_A 46 AVEPLIKALKDEDAWVRRAAADALGQIGDE 75 (201)
T ss_dssp GHHHHHHHTTCSSHHHHHHHHHHHHHHCCG
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhhCCH
Confidence 445555555566655555555555555443
No 51
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=43.73 E-value=2.3e+02 Score=28.81 Aligned_cols=77 Identities=6% Similarity=0.033 Sum_probs=55.1
Q ss_pred hcchHHHHHHhhhhccCCchhhhhhhhhhHHHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHH
Q psy11496 202 DQQVCALLVQNLERLDETVKEESDGVHNTLGIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSIL 281 (607)
Q Consensus 202 e~~l~~lLv~nL~RldE~~~~e~~gV~~~L~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Il 281 (607)
....+..|..-| .++|..=++++|.++|+|+.-.|.......-+.+|+=++.=++ ..-++-.++|...|..|
T Consensus 31 ~e~~l~~L~~LL------~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk--~~dEkval~A~r~L~~L 102 (265)
T 3b2a_A 31 DKRALFLILELA------GEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALS--QENEKVTIKALRALGYL 102 (265)
T ss_dssp CHHHHHHHHHHT------TSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCC--STTHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHH------hccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHh--ccchhHHHHHHHHHHHH
Confidence 444556665555 4457788999999999999976776555444456666665554 35678899999999999
Q ss_pred hhcCh
Q psy11496 282 CQKNN 286 (607)
Q Consensus 282 lq~~~ 286 (607)
+-+-|
T Consensus 103 Le~vp 107 (265)
T 3b2a_A 103 VKDVP 107 (265)
T ss_dssp HTTCC
T ss_pred HcCCC
Confidence 86554
No 52
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=41.62 E-value=1.9e+02 Score=25.85 Aligned_cols=31 Identities=23% Similarity=0.343 Sum_probs=19.0
Q ss_pred CChHHHHHhhccCCchhHHHHHHHhhhhccc
Q psy11496 153 KAVSSMLELVLHENTDIAVAVVDLLQELTDV 183 (607)
Q Consensus 153 ~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~ 183 (607)
++++.|+.+|.|+|..+...++..|..+-++
T Consensus 50 ~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~~ 80 (211)
T 3ltm_A 50 RAVEPLIKALKDEDAWVRRAAADALGQIGDE 80 (211)
T ss_dssp GGHHHHHHHTTCSCHHHHHHHHHHHHHHCCG
T ss_pred cHHHHHHHHHcCCCHHHHHHHHHHHHhhCCH
Confidence 3455566666666666666666666666543
No 53
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=39.31 E-value=2.1e+02 Score=25.59 Aligned_cols=33 Identities=12% Similarity=0.088 Sum_probs=28.7
Q ss_pred cCChHHHHHhhccCCchhHHHHHHHhhhhcccc
Q psy11496 152 LKAVSSMLELVLHENTDIAVAVVDLLQELTDVD 184 (607)
Q Consensus 152 l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d 184 (607)
-++++.|+.+|.|+|.++-..++..|..+-+++
T Consensus 18 ~~~~~~L~~~L~~~~~~vR~~A~~~L~~~~~~~ 50 (211)
T 3ltm_A 18 PEKVEMYIKNLQDDSYYVRRAAAYALGKIGDER 50 (211)
T ss_dssp GGGHHHHHHHTTCSSHHHHHHHHHHHHHHCCGG
T ss_pred HhHHHHHHHHHcCCCHHHHHHHHHHHHHhCCcc
Confidence 346788999999999999999999999987753
No 54
>2i9c_A Hypothetical protein RPA1889; structural genomics, SAD, PSI-2, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.00A {Rhodopseudomonas palustris} SCOP: a.118.1.25
Probab=38.64 E-value=18 Score=32.83 Aligned_cols=34 Identities=18% Similarity=0.051 Sum_probs=24.2
Q ss_pred chHHHHhc-CChH-HHHHhhccCCchhH-HHHHHHhh
Q psy11496 145 LYPLLVQL-KAVS-SMLELVLHENTDIA-VAVVDLLQ 178 (607)
Q Consensus 145 LYp~~v~l-~~v~-sL~~LLsHeNtDIa-i~vi~lL~ 178 (607)
+|-+|... |-.. .|+.||+|||..+. .+++-+|.
T Consensus 47 ~~~eLk~r~Gd~R~aLl~Ll~H~n~~VRl~AA~~~L~ 83 (123)
T 2i9c_A 47 IADELKARDGDQRTALLSLFEYPNMQVRLQAAKLTLA 83 (123)
T ss_dssp HHHHHHHSTTCGGGGGGGGGGSSCHHHHHHHHHTTTT
T ss_pred HHHHHHhcCCcHHHHHHHHHhCCCccHHHHHHHHHHh
Confidence 57777744 6444 89999999999996 45555555
No 55
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=37.31 E-value=65 Score=28.84 Aligned_cols=30 Identities=23% Similarity=0.263 Sum_probs=18.1
Q ss_pred ChHHHHHhhccCCchhHHHHHHHhhhhccc
Q psy11496 154 AVSSMLELVLHENTDIAVAVVDLLQELTDV 183 (607)
Q Consensus 154 ~v~sL~~LLsHeNtDIai~vi~lL~ELtD~ 183 (607)
+++.|+.+|.|+|..+...++..|..+.++
T Consensus 108 ~~~~L~~~l~d~~~~vr~~a~~aL~~~~~~ 137 (201)
T 3ltj_A 108 AVEPLIKALKDEDWFVRIAAAFALGEIGDE 137 (201)
T ss_dssp GHHHHHHHTTCSSHHHHHHHHHHHHHHTCG
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhCCH
Confidence 445555666666666666666666666543
No 56
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=37.07 E-value=70 Score=30.94 Aligned_cols=102 Identities=15% Similarity=0.205 Sum_probs=65.7
Q ss_pred HHHHHHhcchHHHHHHhhhhccCCc-----hhhhhhhhhhHHHhhhhhcCChhHHHHHHh-hhhHHHHHHHhhccCCCCc
Q psy11496 196 LLTALLDQQVCALLVQNLERLDETV-----KEESDGVHNTLGIFENLCELKPDVIHDIGK-QGIIQWSLKRLKAKIPFDG 269 (607)
Q Consensus 196 lv~aL~e~~l~~lLv~nL~RldE~~-----~~e~~gV~~~L~iiENl~e~~p~~~~~l~~-~~LL~wLL~Rl~~~~~~D~ 269 (607)
.|+.+ .++.+..|++-|.++.... +.|.+-.|.++..+=.++...+. ...+.. ...+.++..=+..+. -.
T Consensus 36 Wv~~F-~~~Gl~~L~~~L~~~~~~~~~~~~~~~~~~~~~~l~CLkalmn~~~G-~~~vl~~~~~i~~l~~~L~s~~--~~ 111 (233)
T 2f31_A 36 WVQTF-GAEGLASLLDILKRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFG-IKTMLETEEGILLLVRAMDPAV--PN 111 (233)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHTCC-----CCHHHHHHHHHHHHHHHTSSHHH-HHHHHTSSSHHHHHHTTCCTTS--HH
T ss_pred HHHHH-HHhHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHhCChHH-HHHHHcCcHHHHHHHHHhCCCC--ch
Confidence 45555 4678888889998886532 23566778888888888863333 344444 457788887776432 24
Q ss_pred chhhHHHHHHHHhhcChhHHHHhhcccc-HHHHHHHHhhhh
Q psy11496 270 NKLYTSEILSILCQKNNENRKLLGDLDG-IDILLQQLAYYK 309 (607)
Q Consensus 270 Nk~YasEiL~Illq~~~~~~~~l~~~dg-id~LL~~la~yr 309 (607)
-+.-+.|+|+.+.--+. -+| .+.+|+.+..|+
T Consensus 112 ~r~~~leLL~~lc~~~~--------~~G~~~~VL~Al~~~~ 144 (233)
T 2f31_A 112 MMIDAAKLLSALCILPQ--------PEDMNERVLEAMTERA 144 (233)
T ss_dssp HHHHHHHHHHHHHTCSS--------SSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCC--------CCChHHHHHHHHHHHH
Confidence 45567788888754332 146 677777776664
No 57
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=32.63 E-value=3.2e+02 Score=29.84 Aligned_cols=187 Identities=12% Similarity=0.152 Sum_probs=83.1
Q ss_pred HHHHHHHhhcccCC--CchHHHHhcCChHHHHHhhccCCchhHHHHHHHhhhhccccccc-cchhhHHHHHHHHHhcchH
Q psy11496 130 HTTIQELHAIATVP--DLYPLLVQLKAVSSMLELVLHENTDIAVAVVDLLQELTDVDVLN-ESEEGTESLLTALLDQQVC 206 (607)
Q Consensus 130 d~~Ik~l~~La~~P--~LYp~~v~l~~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d~~~-e~~e~~~~lv~aL~e~~l~ 206 (607)
..++..+..++..+ +.+..++. ..++.|+..|.++|..+...++..|..+...=..+ ........++..
T Consensus 387 ~~a~~~l~~i~~~~~~~~~~~~l~-~il~~l~~~l~d~~~~vr~~a~~~l~~l~~~~~~~~~~~~~~~~~l~~------- 458 (861)
T 2bpt_A 387 EAAVMAFGSIMDGPDKVQRTYYVH-QALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQA------- 458 (861)
T ss_dssp HHHHHHHHHTSSSSCHHHHHHHHH-HHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHGGGSCTTTTHHHHHHH-------
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHH-HHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHhhhhcCCHHHHHHHHHH-------
Confidence 34455566666543 22222222 35677777888888888777777666665431100 001112223332
Q ss_pred HHHHHhhhhccCCchhhhhhhhhhH-HHhhhhhcCChhHHHHHHhhhhHHHHHHHhhccCCCCcchhhHHHHHHHHhhcC
Q psy11496 207 ALLVQNLERLDETVKEESDGVHNTL-GIFENLCELKPDVIHDIGKQGIIQWSLKRLKAKIPFDGNKLYTSEILSILCQKN 285 (607)
Q Consensus 207 ~lLv~nL~RldE~~~~e~~gV~~~L-~iiENl~e~~p~~~~~l~~~~LL~wLL~Rl~~~~~~D~Nk~YasEiL~Illq~~ 285 (607)
|++.| .+. ..-+.+.-.+| .+++++-+..+....... ..+++.+++.++..+....-+..+.+.|+.+....
T Consensus 459 --l~~~l---~~~-~~v~~~a~~al~~l~~~~~~~~~~~l~~~~-~~il~~L~~~l~~~d~~~~vr~~a~~al~~l~~~~ 531 (861)
T 2bpt_A 459 --CLIGL---QDH-PKVATNCSWTIINLVEQLAEATPSPIYNFY-PALVDGLIGAANRIDNEFNARASAFSALTTMVEYA 531 (861)
T ss_dssp --HHHHH---TSC-HHHHHHHHHHHHHHHHHHSSSSSCGGGGGH-HHHHHHHHHHHTCSCCGGGHHHHHHHHHHHHHHHC
T ss_pred --HHHHh---ccC-hHHHHHHHHHHHHHHHhcccccchhhHHHH-HHHHHHHHHHHhCcCcchHHHHHHHHHHHHHHHHc
Confidence 33333 222 22222222222 233332211111111111 24677777777653211233556778888887655
Q ss_pred hhH-HHHhhccccHHHHHHHHhhhhc------CCCCChHHHHHHHHHHHHHHhhh
Q psy11496 286 NEN-RKLLGDLDGIDILLQQLAYYKR------HDPNTPEEQEMMENLFDTLCSCL 333 (607)
Q Consensus 286 ~~~-~~~l~~~dgid~LL~~la~yrk------~Dp~~~eE~E~~eNlfd~L~slL 333 (607)
+.. ...+. ..+..+++.+..+-. .++......+....++.+|..++
T Consensus 532 ~~~~~~~~~--~l~~~l~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~l~ 584 (861)
T 2bpt_A 532 TDTVAETSA--SISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVI 584 (861)
T ss_dssp CGGGHHHHH--HHHHHHHHHHHHHTTSCGGGCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHH--HHHHHHHHHHHHHHhhhcccCChhhHHHHHHHHHHHHHHHHHHH
Confidence 432 11111 123445555554310 01111223344556677776666
No 58
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=20.24 E-value=5.3e+02 Score=24.02 Aligned_cols=31 Identities=13% Similarity=0.106 Sum_probs=24.1
Q ss_pred ChHHHHHhhccCCchhHHHHHHHhhhhcccc
Q psy11496 154 AVSSMLELVLHENTDIAVAVVDLLQELTDVD 184 (607)
Q Consensus 154 ~v~sL~~LLsHeNtDIai~vi~lL~ELtD~d 184 (607)
.++.|+.+|.|+|..+...++..|..+.+++
T Consensus 129 ~~~~L~~~l~d~~~~vR~~a~~aL~~~~~~~ 159 (280)
T 1oyz_A 129 IVEQSQITAFDKSTNVRRATAFAISVINDKA 159 (280)
T ss_dssp HHHHHHHHTTCSCHHHHHHHHHHHHTC---C
T ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHhcCCHH
Confidence 4577888899999999999999999988754
Done!