Query psy11497
Match_columns 69
No_of_seqs 102 out of 123
Neff 4.7
Searched_HMMs 13730
Date Fri Aug 16 19:54:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11497.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11497hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1upka_ a.118.1.15 (A:) Mo25 p 76.0 1.3 9.5E-05 31.1 3.8 42 19-60 55-96 (330)
2 d1eyha_ a.118.9.1 (A:) Epsin 1 22.6 61 0.0045 18.6 4.1 47 20-67 24-71 (144)
3 d1yloa2 c.56.5.4 (A:1-66,A:148 13.3 51 0.0037 20.0 2.1 30 1-30 1-30 (264)
4 d1q1sc_ a.118.1.1 (C:) Importi 11.3 1.5E+02 0.011 17.9 3.9 37 26-67 49-85 (434)
5 d1jr3a1 a.80.1.1 (A:243-368) g 9.6 1.4E+02 0.01 15.8 4.3 28 21-49 6-33 (126)
6 d1wa5b_ a.118.1.1 (B:) Karyoph 9.3 1.3E+02 0.0095 19.0 3.2 19 26-44 112-130 (503)
7 d2elca1 a.46.2.1 (A:1-52) Anth 9.1 1.1E+02 0.0083 14.6 2.3 34 4-39 2-35 (52)
8 d1jlva1 a.45.1.1 (A:85-207) Cl 8.8 1.5E+02 0.011 15.3 4.6 22 47-68 37-58 (123)
9 d1kl9a1 a.60.14.1 (A:89-182) E 8.0 53 0.0038 18.7 0.6 10 35-44 84-93 (94)
10 d1jlwa1 a.45.1.1 (A:91-217) Cl 7.7 1.3E+02 0.0095 15.9 2.4 20 49-68 41-60 (127)
No 1
>d1upka_ a.118.1.15 (A:) Mo25 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.99 E-value=1.3 Score=31.12 Aligned_cols=42 Identities=21% Similarity=0.323 Sum_probs=35.5
Q ss_pred HHhHHHHHHHHHhcchHHHHHHhhhhhcCCchHHHHHHHHHH
Q psy11497 19 EEGTESLLTALLDQQVCALLVQNLERLDETVKEESDGVHNTL 60 (69)
Q Consensus 19 ~e~~~~Lv~aL~e~~llelLv~nL~RLdE~~e~e~~gV~~~L 60 (69)
.|+...|+..+...+++.+|+.||.+|+=...-|..-|++++
T Consensus 55 ~e~~~qL~~e~~~~d~l~~Li~~L~~L~fE~RKD~~~if~~l 96 (330)
T d1upka_ 55 TEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNI 96 (330)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHHTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhChHHHHHHhCCCCCCchhhhHHHHHHHH
Confidence 567999999999999999999999999876666676666654
No 2
>d1eyha_ a.118.9.1 (A:) Epsin 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.60 E-value=61 Score=18.55 Aligned_cols=47 Identities=6% Similarity=0.050 Sum_probs=29.9
Q ss_pred HhHHHHHHHHHhcchHHHHHHhh-hhhcCCchHHHHHHHHHHHHhhccc
Q psy11497 20 EGTESLLTALLDQQVCALLVQNL-ERLDETVKEESDGVHNTLGKLVTPL 67 (69)
Q Consensus 20 e~~~~Lv~aL~e~~llelLv~nL-~RLdE~~e~e~~gV~~~L~iiENLl 67 (69)
.....++.+--+..-..-.+.-| .||.... ..-.-||.||-+++.|+
T Consensus 24 k~~~~I~~~t~~~~~~~~i~~~L~kRl~~~~-k~Wrvv~K~L~ll~~Ll 71 (144)
T d1eyha_ 24 SLMSEIADLTYNVVAFSEIMSMIWKRLNDHG-KNWRHVYKAMTLMEYLI 71 (144)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHHHHHHHSCCG-GGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChhhHHHHHHHHHHHHhcCC-CchhHHHHHHHHHHHHH
Confidence 44555555544444344455555 8887643 35678899999999876
No 3
>d1yloa2 c.56.5.4 (A:1-66,A:148-345) Aminopeptidase YpdE {Shigella flexneri [TaxId: 623]}
Probab=13.32 E-value=51 Score=19.98 Aligned_cols=30 Identities=20% Similarity=0.296 Sum_probs=20.9
Q ss_pred CcchhhhhccccccccccHHhHHHHHHHHH
Q psy11497 1 MKCFSFQELTDVDVLNESEEGTESLLTALL 30 (69)
Q Consensus 1 ~~~~lL~ELTD~Dv~~e~~e~~~~Lv~aL~ 30 (69)
|=+++|.+|.+.......|.....++...+
T Consensus 1 m~~~ll~~l~~~~s~sg~E~~~~~~~~~~l 30 (264)
T d1yloa2 1 MDLSLLKALSEADAIASSEQEVRQILLEEA 30 (264)
T ss_dssp CCHHHHHHHHHSCCBTTBCHHHHHHHHHHH
T ss_pred CCHHHHHHHHcCCCCCcCHHHHHHHHHHHH
Confidence 557899999999998865555555544433
No 4
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]}
Probab=11.27 E-value=1.5e+02 Score=17.85 Aligned_cols=37 Identities=14% Similarity=0.067 Sum_probs=22.6
Q ss_pred HHHHHhcchHHHHHHhhhhhcCCchHHHHHHHHHHHHhhccc
Q psy11497 26 LTALLDQQVCALLVQNLERLDETVKEESDGVHNTLGKLVTPL 67 (69)
Q Consensus 26 v~aL~e~~llelLv~nL~RLdE~~e~e~~gV~~~L~iiENLl 67 (69)
++.+++.++++.|++-|.+-+. ..=.+.+.+++-|+.
T Consensus 49 ~~~i~~~g~i~~Lv~lL~~~~~-----~~v~~~a~~~L~~la 85 (434)
T d1q1sc_ 49 IDNIIRAGLIPKFVSFLGKTDC-----SPIQFESAWALTNIA 85 (434)
T ss_dssp HHHHHHTTCHHHHHHHTTCGGG-----HHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHccCCC-----HHHHHHHHHHHHHHh
Confidence 3677888999999998864321 122244555555553
No 5
>d1jr3a1 a.80.1.1 (A:243-368) gamma subunit {Escherichia coli [TaxId: 562]}
Probab=9.58 E-value=1.4e+02 Score=15.78 Aligned_cols=28 Identities=11% Similarity=0.103 Sum_probs=15.0
Q ss_pred hHHHHHHHHHhcchHHHHHHhhhhhcCCc
Q psy11497 21 GTESLLTALLDQQVCALLVQNLERLDETV 49 (69)
Q Consensus 21 ~~~~Lv~aL~e~~llelLv~nL~RLdE~~ 49 (69)
..-.|++++++++.-+.| ..+.++.+..
T Consensus 6 ~~~~L~~~I~~~d~~~~L-~~l~~i~~~G 33 (126)
T d1jr3a1 6 QALSLVEAMVEANGERVM-ALINEAAARG 33 (126)
T ss_dssp HHHHHHHHHHHTCHHHHH-HHHHHHHHTT
T ss_pred HHHHHHHHHHcCCHHHHH-HHHHHHHHhC
Confidence 345566666666655544 5555554433
No 6
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=9.29 E-value=1.3e+02 Score=18.95 Aligned_cols=19 Identities=16% Similarity=0.323 Sum_probs=15.6
Q ss_pred HHHHHhcchHHHHHHhhhh
Q psy11497 26 LTALLDQQVCALLVQNLER 44 (69)
Q Consensus 26 v~aL~e~~llelLv~nL~R 44 (69)
++.+++++++..|++.|.+
T Consensus 112 i~~ii~~g~i~~Lv~~l~~ 130 (503)
T d1wa5b_ 112 IDVVIQAGVVPRLVEFMRE 130 (503)
T ss_dssp HHHHHHTTCHHHHHHTTST
T ss_pred HHHHHHCCChHHHHHHHcC
Confidence 4678889999999998864
No 7
>d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]}
Probab=9.14 E-value=1.1e+02 Score=14.62 Aligned_cols=34 Identities=21% Similarity=0.230 Sum_probs=21.7
Q ss_pred hhhhhccccccccccHHhHHHHHHHHHhcchHHHHH
Q psy11497 4 FSFQELTDVDVLNESEEGTESLLTALLDQQVCALLV 39 (69)
Q Consensus 4 ~lL~ELTD~Dv~~e~~e~~~~Lv~aL~e~~llelLv 39 (69)
++|+.|..-..+.. +.+..+++.++++.+-+.-+
T Consensus 2 d~l~kl~~g~~Lt~--~ea~~~~~~im~G~~~~~qi 35 (52)
T d2elca1 2 DAVKKAILGEVLEE--EEAYEVMRALMAGEVSPVRA 35 (52)
T ss_dssp CHHHHHHTTCCCCH--HHHHHHHHHHHTTCSCHHHH
T ss_pred HHHHHHHcCCCCCH--HHHHHHHHHHHcCCCCHHHH
Confidence 34555555555544 56888888888877665444
No 8
>d1jlva1 a.45.1.1 (A:85-207) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-3 [TaxId: 123217]}
Probab=8.75 E-value=1.5e+02 Score=15.33 Aligned_cols=22 Identities=18% Similarity=0.151 Sum_probs=17.5
Q ss_pred CCchHHHHHHHHHHHHhhcccC
Q psy11497 47 ETVKEESDGVHNTLGKLVTPLG 68 (69)
Q Consensus 47 E~~e~e~~gV~~~L~iiENLl~ 68 (69)
+..++..+.++.+|+++|..++
T Consensus 37 ~~~~~~~~~~~~~l~~le~~L~ 58 (123)
T d1jlva1 37 PANAENEKKMKDAVDFLNTFLD 58 (123)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTS
T ss_pred CcHHHHHHHHHHHHHHHHHHHc
Confidence 3456677889999999998776
No 9
>d1kl9a1 a.60.14.1 (A:89-182) Eukaryotic initiation factor 2alpha, eIF2alpha, domain 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.96 E-value=53 Score=18.66 Aligned_cols=10 Identities=30% Similarity=0.654 Sum_probs=4.6
Q ss_pred HHHHHHhhhh
Q psy11497 35 CALLVQNLER 44 (69)
Q Consensus 35 lelLv~nL~R 44 (69)
.+.|.+|+.|
T Consensus 84 k~~L~~~I~r 93 (94)
T d1kl9a1 84 REVLINNINR 93 (94)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 3444455443
No 10
>d1jlwa1 a.45.1.1 (A:91-217) Class delta GST {Mosquito (Anopheles dirus b), isozyme 1-4 [TaxId: 123217]}
Probab=7.74 E-value=1.3e+02 Score=15.87 Aligned_cols=20 Identities=20% Similarity=0.019 Sum_probs=15.8
Q ss_pred chHHHHHHHHHHHHhhcccC
Q psy11497 49 VKEESDGVHNTLGKLVTPLG 68 (69)
Q Consensus 49 ~e~e~~gV~~~L~iiENLl~ 68 (69)
.+.-.+.+..+|+++|+-++
T Consensus 41 ~~~~~~~~~~~l~~le~~L~ 60 (127)
T d1jlwa1 41 DPGRLRSMEQALEFLNTFLE 60 (127)
T ss_dssp CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 34456789999999999876
Done!