Query psy11499
Match_columns 70
No_of_seqs 131 out of 833
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 19:56:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11499.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11499hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1dqc_A Tachycitin; disulfide-r 99.7 1.2E-17 4.1E-22 96.3 3.4 46 23-69 16-61 (74)
2 1wb0_A Chitinase 1, chitotrios 99.3 4.7E-13 1.6E-17 96.8 0.0 42 22-63 404-445 (445)
3 3ssb_I IMPI alpha, inducible m 63.8 0.93 3.2E-05 21.6 -0.7 19 46-65 8-26 (32)
4 1ccv_A AMCI, chymotrypsin inhi 63.7 1.5 5.2E-05 22.8 0.1 19 45-64 36-54 (56)
5 2p3f_N Anti-coagulant protein 51.5 3.4 0.00012 23.1 0.1 20 45-64 49-68 (78)
6 3mjh_B Early endosome antigen 44.1 5.5 0.00019 19.2 0.2 8 2-9 4-11 (34)
7 1iyc_A Scarabaecin; antifungal 39.0 13 0.00046 17.8 1.2 11 45-55 16-26 (36)
8 2h9e_C Anti-coagulant protein 31.8 7.5 0.00026 21.9 -0.5 18 45-63 50-67 (84)
9 1xu2_R Tumor necrosis factor r 29.0 22 0.00075 18.4 1.1 17 45-61 2-18 (47)
10 2oqj_C Peptide 2G12.1 (ACPPSHV 26.9 22 0.00076 15.9 0.8 20 46-65 1-20 (26)
11 1wkt_A Yeast killer toxin; wil 26.5 32 0.0011 19.4 1.6 16 54-69 12-27 (88)
12 2loe_A 6-cysteine protein, put 25.7 18 0.00063 21.7 0.5 9 1-9 47-55 (127)
13 1ata_A Ascaris trypsin inhibit 21.5 29 0.00099 18.3 0.7 20 45-65 38-59 (62)
14 1vm9_A Toluene-4-monooxygenase 21.5 89 0.003 17.4 2.9 22 43-64 59-81 (111)
15 1xak_A SARS ORF7A accessory pr 21.5 55 0.0019 18.3 1.9 20 33-52 6-27 (83)
No 1
>1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus tridentatus} SCOP: g.31.1.1
Probab=99.69 E-value=1.2e-17 Score=96.27 Aligned_cols=46 Identities=15% Similarity=0.103 Sum_probs=43.7
Q ss_pred CCCCCccCCcccEEcCCCeeeEeeCCCCCeeecCCCcCCCCCCCCCC
Q psy11499 23 PRFPVPGDRERLITCVDGHPRLISCGDGKLFDEASLTCLGPEDYTDK 69 (70)
Q Consensus 23 ~~~p~p~dC~~yy~C~~G~~~~~~Cp~Gl~Fd~~~~~C~~p~~v~~C 69 (70)
|+|+||.+|++||+|++|.++++.||.||+||++++.|+||++|. |
T Consensus 16 G~~~~p~dC~~fy~C~~G~~~~~~Cp~Gl~Fn~~~~~Cd~p~~v~-C 61 (74)
T 1dqc_A 16 GPNVNLYSCCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKAG-C 61 (74)
T ss_dssp EEECCSSCSSEEEEEETTEEEEEECTTSCEEETTTTEEECTTTTT-C
T ss_pred CEeCCcccCcceeECCCCcEEEeECcCCCEEChhhCcCcCcccCC-C
Confidence 478999999999999999999999999999999999999999985 5
No 2
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors, chitinase inhibitors, carbohyd metabolism, chitin degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A 1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Probab=99.26 E-value=4.7e-13 Score=96.79 Aligned_cols=42 Identities=24% Similarity=0.484 Sum_probs=0.0
Q ss_pred CCCCCCccCCcccEEcCCCeeeEeeCCCCCeeecCCCcCCCC
Q psy11499 22 YPRFPVPGDRERLITCVDGHPRLISCGDGKLFDEASLTCLGP 63 (70)
Q Consensus 22 ~~~~p~p~dC~~yy~C~~G~~~~~~Cp~Gl~Fd~~~~~C~~p 63 (70)
.|+||||.+|++||+|.+|.+.++.||+||+||++.+.|+||
T Consensus 404 ~G~~~~p~~C~~fy~C~~g~~~~~~Cp~Gl~f~~~~~~Cd~p 445 (445)
T 1wb0_A 404 DGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTWN 445 (445)
T ss_dssp ------------------------------------------
T ss_pred CcccCCCCCCCcccCCCCCCEEeCCCcCCCEECcccCCCCCC
Confidence 468999999999999999999999999999999999999997
No 3
>3ssb_I IMPI alpha, inducible metalloproteinase inhibitor protein; thermolysin fold - family I8 fold, metalloprotease thermoLys inhibitor; 1.80A {Galleria mellonella}
Probab=63.78 E-value=0.93 Score=21.64 Aligned_cols=19 Identities=32% Similarity=0.510 Sum_probs=14.7
Q ss_pred eCCCCCeeecCCCcCCCCCC
Q psy11499 46 SCGDGKLFDEASLTCLGPED 65 (70)
Q Consensus 46 ~Cp~Gl~Fd~~~~~C~~p~~ 65 (70)
.|++|++.|. .+.|+.+++
T Consensus 8 ~C~~G~vrn~-~G~CV~~~~ 26 (32)
T 3ssb_I 8 YCEDGYARDV-NGKCIPIKD 26 (32)
T ss_dssp EECTTEEECT-TSCEEEGGG
T ss_pred CcCCCcEECC-CCCEECHHH
Confidence 5899999986 677877653
No 4
>1ccv_A AMCI, chymotrypsin inhibitor; protein inhibitor, hemolymph, canonical inhibitor, hydrolase inhibitor; NMR {Apis mellifera} SCOP: g.22.1.1
Probab=63.68 E-value=1.5 Score=22.77 Aligned_cols=19 Identities=32% Similarity=0.599 Sum_probs=15.3
Q ss_pred eeCCCCCeeecCCCcCCCCC
Q psy11499 45 ISCGDGKLFDEASLTCLGPE 64 (70)
Q Consensus 45 ~~Cp~Gl~Fd~~~~~C~~p~ 64 (70)
=.|++|+|.|.. +.|+.++
T Consensus 36 C~C~~G~v~~~~-g~CV~~~ 54 (56)
T 1ccv_A 36 CQCQEGFLRNGE-GACVLPE 54 (56)
T ss_dssp EEECTTCEEETT-TEEECGG
T ss_pred CcCCCCeeECCC-CcccChh
Confidence 579999999985 7887654
No 5
>2p3f_N Anti-coagulant protein 5; factor XA, hydrolase; 3.10A {Ancylostoma caninum}
Probab=51.46 E-value=3.4 Score=23.08 Aligned_cols=20 Identities=30% Similarity=0.451 Sum_probs=16.8
Q ss_pred eeCCCCCeeecCCCcCCCCC
Q psy11499 45 ISCGDGKLFDEASLTCLGPE 64 (70)
Q Consensus 45 ~~Cp~Gl~Fd~~~~~C~~p~ 64 (70)
=.|++|+|-|..++.|+.++
T Consensus 49 C~C~~G~vr~~~~g~CV~~~ 68 (78)
T 2p3f_N 49 CVCKDGFYRDTVIGDCVREE 68 (78)
T ss_dssp EEECSSCEEETTTTEEECGG
T ss_pred cCcCCCEeEcCCCCceECHH
Confidence 56999999998778898765
No 6
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=44.12 E-value=5.5 Score=19.23 Aligned_cols=8 Identities=50% Similarity=1.236 Sum_probs=6.1
Q ss_pred CcccCCCC
Q psy11499 2 VGFKCPDS 9 (70)
Q Consensus 2 ~gf~CP~~ 9 (70)
.||.||-=
T Consensus 4 EGFiCP~C 11 (34)
T 3mjh_B 4 EGFICPQC 11 (34)
T ss_dssp EEEECTTT
T ss_pred cccCCcHH
Confidence 48999964
No 7
>1iyc_A Scarabaecin; antifungal peptide, antimicrobial peptide, beetle, chitin-binding, antifungal protein; NMR {Synthetic} SCOP: g.31.1.2
Probab=39.01 E-value=13 Score=17.77 Aligned_cols=11 Identities=27% Similarity=0.791 Sum_probs=9.0
Q ss_pred eeCCCCCeeec
Q psy11499 45 ISCGDGKLFDE 55 (70)
Q Consensus 45 ~~Cp~Gl~Fd~ 55 (70)
..||.|.+||-
T Consensus 16 sncpkgkvwng 26 (36)
T 1iyc_A 16 SNCPKGKVWNG 26 (36)
T ss_dssp SCCCSSCEEET
T ss_pred cCCCCcceecC
Confidence 46999999984
No 8
>2h9e_C Anti-coagulant protein C2; factor XA, NAPC2, hydrolase-hydrolase inhibitor C blood clotting; HET: DTY; 2.20A {Ancylostoma caninum} SCOP: g.22.1.1 PDB: 1cou_A
Probab=31.78 E-value=7.5 Score=21.87 Aligned_cols=18 Identities=17% Similarity=0.457 Sum_probs=14.0
Q ss_pred eeCCCCCeeecCCCcCCCC
Q psy11499 45 ISCGDGKLFDEASLTCLGP 63 (70)
Q Consensus 45 ~~Cp~Gl~Fd~~~~~C~~p 63 (70)
=.|++|+|.|.. +.|+.+
T Consensus 50 C~C~~G~vr~~~-g~CV~~ 67 (84)
T 2h9e_C 50 CVCEEGFYRNKD-DKCVSA 67 (84)
T ss_dssp CEECSSCEECTT-CCEECH
T ss_pred CCCCCCeEEcCC-CCEECH
Confidence 469999999863 778765
No 9
>1xu2_R Tumor necrosis factor receptor superfamily member; TNFSF, cytokine, CRD, jelly-roll, cysteine-rich, H growth factor receptor complex; 2.35A {Homo sapiens} SCOP: g.24.1.2 PDB: 2kn1_A* 1oqd_K
Probab=29.02 E-value=22 Score=18.38 Aligned_cols=17 Identities=24% Similarity=0.622 Sum_probs=13.2
Q ss_pred eeCCCCCeeecCCCcCC
Q psy11499 45 ISCGDGKLFDEASLTCL 61 (70)
Q Consensus 45 ~~Cp~Gl~Fd~~~~~C~ 61 (70)
.+||...+||+-...|.
T Consensus 2 ~~C~~eqYwD~LL~~C~ 18 (47)
T 1xu2_R 2 GQCSQNEYFDSLLHACI 18 (47)
T ss_dssp --CCTTEEEETTTTEEE
T ss_pred CCCcHHHHHHHHHhccc
Confidence 57999999999888774
No 10
>2oqj_C Peptide 2G12.1 (ACPPSHVLDMRSGTCLAAEGK); immunoglobulin fold, immune system; 2.80A {Homo sapiens}
Probab=26.95 E-value=22 Score=15.85 Aligned_cols=20 Identities=35% Similarity=0.625 Sum_probs=16.3
Q ss_pred eCCCCCeeecCCCcCCCCCC
Q psy11499 46 SCGDGKLFDEASLTCLGPED 65 (70)
Q Consensus 46 ~Cp~Gl~Fd~~~~~C~~p~~ 65 (70)
.||+..+.|-.++.|...+.
T Consensus 1 acppshvldmrsgtclaaeg 20 (26)
T 2oqj_C 1 ACPPSHVLDMRSGTCLAAEG 20 (26)
T ss_pred CcCchheeeccCCceEeecC
Confidence 38999999999999976653
No 11
>1wkt_A Yeast killer toxin; williopsis mrakii; NMR {Williopsis saturnus var} SCOP: b.11.1.2
Probab=26.54 E-value=32 Score=19.42 Aligned_cols=16 Identities=13% Similarity=0.233 Sum_probs=12.1
Q ss_pred ecCCCcCCCCCCCCCC
Q psy11499 54 DEASLTCLGPEDYTDK 69 (70)
Q Consensus 54 d~~~~~C~~p~~v~~C 69 (70)
|+.+..|||..|-.-|
T Consensus 12 dpn~gscdwkqnwntc 27 (88)
T 1wkt_A 12 DPNTGSCDWKQNWNTC 27 (88)
T ss_dssp CTTTSCCBCSCCTTSC
T ss_pred CCCCCccchhccccee
Confidence 6788999998775544
No 12
>2loe_A 6-cysteine protein, putative; malaria, membrane protein; NMR {Plasmodium falciparum 3D7}
Probab=25.67 E-value=18 Score=21.74 Aligned_cols=9 Identities=56% Similarity=1.597 Sum_probs=7.5
Q ss_pred CCcccCCCC
Q psy11499 1 IVGFKCPDS 9 (70)
Q Consensus 1 ~~gf~CP~~ 9 (70)
++||.||.+
T Consensus 47 viG~~CP~~ 55 (127)
T 2loe_A 47 LIGFKCPSN 55 (127)
T ss_dssp CEEEECCTT
T ss_pred EEEEECCCC
Confidence 479999985
No 13
>1ata_A Ascaris trypsin inhibitor; proteinase inhibitor(trypsin); NMR {Ascaris suum} SCOP: g.22.1.1 PDB: 1atb_A 1atd_A 1ate_A
Probab=21.51 E-value=29 Score=18.27 Aligned_cols=20 Identities=30% Similarity=0.441 Sum_probs=15.5
Q ss_pred eeCC--CCCeeecCCCcCCCCCC
Q psy11499 45 ISCG--DGKLFDEASLTCLGPED 65 (70)
Q Consensus 45 ~~Cp--~Gl~Fd~~~~~C~~p~~ 65 (70)
=.|+ +|++.|. .+.|+.+++
T Consensus 38 C~C~~~~G~vr~~-~g~CV~~~~ 59 (62)
T 1ata_A 38 CECIASAGFVRDA-QGNCIKFED 59 (62)
T ss_dssp EECCTTTTEEEET-TTEEEESTT
T ss_pred cCcCCCCCeEECC-CCCEECHHH
Confidence 5699 9999986 578887753
No 14
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=21.48 E-value=89 Score=17.37 Aligned_cols=22 Identities=18% Similarity=0.436 Sum_probs=17.9
Q ss_pred eEeeCC-CCCeeecCCCcCCCCC
Q psy11499 43 RLISCG-DGKLFDEASLTCLGPE 64 (70)
Q Consensus 43 ~~~~Cp-~Gl~Fd~~~~~C~~p~ 64 (70)
..+.|| .|..||.+++.|..|.
T Consensus 59 ~~i~Cp~Hg~~Fd~~tG~~~~p~ 81 (111)
T 1vm9_A 59 GVITCRAHLWTFNDGTGHGINPD 81 (111)
T ss_dssp TEEECTTTCCEEETTTCBBSSSS
T ss_pred CEEEcCCCCCEEeCCCccCCCCC
Confidence 468899 8999999989887653
No 15
>1xak_A SARS ORF7A accessory protein; I-SET IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Sars coronavirus} SCOP: b.1.24.1 PDB: 1yo4_A
Probab=21.46 E-value=55 Score=18.32 Aligned_cols=20 Identities=25% Similarity=0.587 Sum_probs=14.3
Q ss_pred ccEEcCCCeeeE--eeCCCCCe
Q psy11499 33 RLITCVDGHPRL--ISCGDGKL 52 (70)
Q Consensus 33 ~yy~C~~G~~~~--~~Cp~Gl~ 52 (70)
.|-.|+.|..++ ..||+|++
T Consensus 6 hyqec~rgttvllkepc~~~ty 27 (83)
T 1xak_A 6 HYQECVRGTTVILKEPCPSGTY 27 (83)
T ss_dssp EEEEEETTSEEEEECSSTTCEE
T ss_pred hhHhhhCCceEEecCCCCCCcc
Confidence 366799886555 45999875
Done!