Query psy11501
Match_columns 133
No_of_seqs 154 out of 1749
Neff 9.9
Searched_HMMs 29240
Date Fri Aug 16 20:01:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11501.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11501hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gy5_A Angiopoietin-1 receptor 99.9 2.3E-23 7.8E-28 152.8 9.8 126 7-133 187-317 (423)
2 1klo_A Laminin; glycoprotein; 99.8 4.7E-19 1.6E-23 114.8 4.0 110 22-133 1-143 (162)
3 1klo_A Laminin; glycoprotein; 99.7 9.8E-18 3.4E-22 108.5 2.5 101 1-104 28-156 (162)
4 2ygq_A WIF-1, WNT inhibitory f 99.6 4.5E-16 1.5E-20 110.7 6.8 113 8-133 168-305 (324)
5 2vj2_A Jagged-1; signalling, p 99.6 5.2E-16 1.8E-20 101.1 5.4 114 8-133 20-166 (169)
6 2gy5_A Angiopoietin-1 receptor 99.6 3.6E-15 1.2E-19 109.4 8.6 69 24-93 252-320 (423)
7 2vj3_A Neurogenic locus notch 99.5 1.9E-13 6.4E-18 85.9 7.6 97 23-133 14-116 (135)
8 4d90_A EGF-like repeat and dis 99.4 7.3E-13 2.5E-17 83.7 8.6 103 23-133 7-130 (143)
9 2ygq_A WIF-1, WNT inhibitory f 99.4 7.9E-13 2.7E-17 94.0 7.8 97 23-132 154-272 (324)
10 4aqs_A Laminin subunit beta-1; 99.4 3.3E-13 1.1E-17 101.5 3.9 98 34-133 406-522 (525)
11 3fcs_B Integrin beta-3; beta p 99.3 3.2E-12 1.1E-16 98.5 8.0 110 7-132 460-596 (690)
12 3k6s_B Integrin beta-2; cell r 99.3 3.9E-12 1.4E-16 97.8 6.0 110 8-133 449-589 (687)
13 2vj3_A Neurogenic locus notch 99.2 3E-11 1E-15 75.7 5.9 79 8-93 31-119 (135)
14 4d90_A EGF-like repeat and dis 99.2 3.5E-11 1.2E-15 75.9 6.2 79 8-93 26-133 (143)
15 2bou_A EGF-like module contain 99.1 7E-11 2.4E-15 74.6 5.7 101 23-132 8-130 (143)
16 2vj2_A Jagged-1; signalling, p 99.1 3E-11 1E-15 78.5 4.0 41 8-49 53-97 (169)
17 1z1y_A Ookinete surface protei 99.1 1.6E-12 5.6E-17 85.6 -2.8 111 8-132 28-171 (186)
18 3fcs_B Integrin beta-3; beta p 99.1 2.4E-10 8.2E-15 88.2 8.7 102 8-132 507-624 (690)
19 4aqs_A Laminin subunit beta-1; 99.0 9.4E-11 3.2E-15 88.2 3.5 89 2-92 417-524 (525)
20 4fbr_A Lectin, myxobacterial h 99.0 1.6E-12 5.5E-17 89.5 -8.1 125 8-132 16-198 (267)
21 2p28_B Integrin beta-2; hybrid 98.9 1.1E-09 3.7E-14 73.7 4.1 97 23-133 97-211 (217)
22 4fbr_A Lectin, myxobacterial h 98.9 1.2E-12 4.2E-17 90.1 -10.5 108 23-132 106-265 (267)
23 3k6s_B Integrin beta-2; cell r 98.9 3.7E-09 1.3E-13 81.6 6.5 78 8-93 496-592 (687)
24 1tpg_A T-plasminogen activator 98.7 8.5E-09 2.9E-13 60.2 4.1 73 8-93 5-86 (91)
25 1yo8_A Thrombospondin-2; EGF, 98.7 2E-08 6.9E-13 76.8 6.7 99 23-131 10-139 (634)
26 1z1y_A Ookinete surface protei 98.7 3.2E-09 1.1E-13 69.8 0.6 94 23-131 12-126 (186)
27 1tpg_A T-plasminogen activator 98.6 1.8E-08 6.2E-13 58.8 3.4 78 34-133 1-83 (91)
28 2y38_A Laminin subunit alpha-5 98.6 3.9E-08 1.3E-12 71.5 4.8 82 21-105 265-384 (403)
29 3zyj_B Netrin-G1; cell adhesio 98.6 9.6E-09 3.3E-13 75.0 1.6 102 21-129 296-420 (426)
30 2wg3_C Hedgehog-interacting pr 98.6 1.8E-08 6E-13 74.9 2.5 73 8-93 380-455 (463)
31 2bou_A EGF-like module contain 98.5 2.3E-08 7.8E-13 63.0 1.6 89 8-97 22-138 (143)
32 2p28_B Integrin beta-2; hybrid 98.5 4.7E-08 1.6E-12 65.8 2.2 76 8-93 110-214 (217)
33 4aqt_A Laminin subunit gamma-1 98.4 8.9E-08 3E-12 69.2 3.0 86 21-108 254-364 (375)
34 1dx5_I Thrombomodulin; serine 98.3 1.6E-07 5.4E-12 57.3 1.6 87 29-132 15-111 (118)
35 3u7u_G Neuregulin 1; signaling 98.2 8.5E-07 2.9E-11 46.7 3.0 42 45-93 1-49 (55)
36 2y38_A Laminin subunit alpha-5 98.1 1E-06 3.5E-11 64.1 3.0 59 1-62 295-384 (403)
37 1uzk_A Fibrillin-1; glycoprote 98.1 1.3E-07 4.5E-12 60.7 -1.6 103 23-132 11-155 (162)
38 1x7a_L Coagulation factor IX, 98.1 3E-06 1E-10 53.6 3.6 61 23-92 55-125 (146)
39 1emn_A Fibrillin; extracellula 98.1 5.1E-06 1.7E-10 47.3 4.1 63 61-132 8-76 (82)
40 1yo8_A Thrombospondin-2; EGF, 98.1 3.2E-06 1.1E-10 64.8 4.1 85 4-92 26-145 (634)
41 2wg3_C Hedgehog-interacting pr 98.1 6.2E-07 2.1E-11 66.6 0.3 54 66-132 398-451 (463)
42 1aut_L Activated protein C; se 98.0 4.1E-06 1.4E-10 50.6 3.6 57 67-131 22-85 (114)
43 1aut_L Activated protein C; se 98.0 7.7E-06 2.6E-10 49.4 4.5 63 24-92 22-89 (114)
44 1emn_A Fibrillin; extracellula 98.0 5.6E-06 1.9E-10 47.1 3.2 59 23-90 13-77 (82)
45 1x7a_L Coagulation factor IX, 98.0 9.5E-06 3.2E-10 51.2 4.4 60 61-130 51-116 (146)
46 3u7u_G Neuregulin 1; signaling 98.0 4.5E-06 1.6E-10 43.9 2.4 31 23-53 15-52 (55)
47 1dx5_I Thrombomodulin; serine 97.9 1.3E-06 4.3E-11 53.3 -0.4 73 8-89 27-111 (118)
48 2c4f_L Coagulation factor VII 97.9 5.4E-06 1.8E-10 52.1 2.3 63 23-92 54-128 (142)
49 3h5c_B Vitamin K-dependent pro 97.9 4.7E-05 1.6E-09 53.6 7.0 60 23-90 12-77 (317)
50 2w2n_E LDL receptor, low-densi 97.8 6E-06 2E-10 49.4 1.5 74 8-90 17-101 (107)
51 1nfu_B Coagulation factor XA, 97.8 2E-06 6.8E-11 56.9 -0.8 63 23-93 49-121 (195)
52 4aqt_A Laminin subunit gamma-1 97.7 9.6E-06 3.3E-10 58.6 2.0 60 1-62 281-361 (375)
53 2c4f_L Coagulation factor VII 97.7 1.1E-05 3.8E-10 50.6 2.1 58 66-130 54-119 (142)
54 2vh0_B Activated factor XA lig 97.7 2.8E-06 9.5E-11 52.9 -0.8 62 23-92 49-120 (134)
55 3h5c_B Vitamin K-dependent pro 97.7 0.0001 3.5E-09 51.8 6.5 64 60-132 7-76 (317)
56 2w86_A Fibrillin-1, fibrillin1 97.6 2.1E-05 7.1E-10 49.5 1.9 38 94-132 91-140 (147)
57 1nfu_B Coagulation factor XA, 97.5 1.6E-05 5.4E-10 52.5 0.4 62 61-130 45-111 (195)
58 2vh0_B Activated factor XA lig 97.5 2.1E-05 7E-10 48.9 0.4 58 66-130 49-111 (134)
59 3zyj_B Netrin-G1; cell adhesio 97.5 3.9E-05 1.3E-09 56.2 1.9 27 66-93 372-398 (426)
60 2w2n_E LDL receptor, low-densi 97.5 4.1E-05 1.4E-09 45.7 1.6 52 72-132 42-100 (107)
61 1edm_B Factor IX; epidermal gr 97.5 8.7E-05 3E-09 35.9 2.5 31 61-92 6-38 (39)
62 1edm_B Factor IX; epidermal gr 97.4 7.8E-05 2.7E-09 36.1 2.1 27 23-49 10-38 (39)
63 1hae_A Heregulin-alpha; growth 97.4 0.00013 4.4E-09 39.3 3.0 32 23-54 13-51 (63)
64 1lmj_A Fibrillin 1; EGF, calci 97.3 7.7E-05 2.6E-09 42.6 1.5 58 66-132 12-79 (86)
65 1a3p_A Epidermal growth factor 97.3 0.00019 6.4E-09 35.9 2.5 28 23-50 10-41 (45)
66 1egf_A Epidermal growth factor 97.2 0.00052 1.8E-08 35.5 4.0 28 23-50 13-44 (53)
67 1nql_B Epidermal growth factor 97.1 0.00016 5.6E-09 37.5 1.5 30 23-52 13-46 (53)
68 1a3p_A Epidermal growth factor 97.1 0.00035 1.2E-08 34.9 2.7 28 66-93 10-41 (45)
69 1egf_A Epidermal growth factor 97.1 0.0012 3.9E-08 34.2 4.7 28 66-93 13-44 (53)
70 2w86_A Fibrillin-1, fibrillin1 97.0 0.00012 4.2E-09 45.9 0.4 22 67-89 117-140 (147)
71 2fd6_A Urokinase-type plasmino 97.0 0.00098 3.3E-08 40.6 4.4 30 22-51 1-35 (122)
72 1z6c_A Vitamin K-dependent pro 97.0 0.00017 5.7E-09 41.3 0.8 57 24-92 13-77 (87)
73 3ca7_A Protein spitz; argos, E 97.0 0.00028 9.5E-09 36.5 1.4 37 8-50 6-48 (52)
74 1nql_B Epidermal growth factor 96.9 0.00035 1.2E-08 36.3 1.6 30 65-94 12-45 (53)
75 1k36_A Epiregulin; EGF-like fo 96.9 0.00039 1.3E-08 35.0 1.7 27 23-50 13-43 (46)
76 3ltf_D Protein spitz; receptor 96.9 0.0006 2.1E-08 36.1 2.2 30 23-52 15-50 (58)
77 1z6c_A Vitamin K-dependent pro 96.9 0.00057 2E-08 39.0 2.3 53 67-130 13-75 (87)
78 1uzk_A Fibrillin-1; glycoprote 96.8 7.3E-05 2.5E-09 47.7 -1.9 83 8-91 27-157 (162)
79 1lmj_A Fibrillin 1; EGF, calci 96.8 0.00017 5.7E-09 41.2 -0.3 58 24-90 13-80 (86)
80 1hae_A Heregulin-alpha; growth 96.8 0.0008 2.7E-08 36.1 2.3 28 66-93 13-47 (63)
81 3ca7_A Protein spitz; argos, E 96.6 0.00063 2.2E-08 35.1 1.3 28 66-93 15-48 (52)
82 3ltf_D Protein spitz; receptor 96.6 0.00087 3E-08 35.4 1.7 30 66-95 15-50 (58)
83 1k36_A Epiregulin; EGF-like fo 96.5 0.0013 4.4E-08 33.0 2.0 28 65-93 12-43 (46)
84 3p5b_L Low density lipoprotein 96.5 0.0039 1.3E-07 45.2 5.2 54 28-90 12-72 (400)
85 3p5b_L Low density lipoprotein 96.5 0.0024 8.3E-08 46.2 4.0 54 70-132 11-71 (400)
86 2k2s_B Micronemal protein 6; m 96.5 0.00094 3.2E-08 35.7 1.3 27 23-49 18-49 (61)
87 2ygo_A WIF-1, WNT inhibitory f 96.2 0.0039 1.4E-07 40.6 3.3 27 23-50 154-180 (188)
88 2e26_A Reelin, reeler protein; 96.1 0.001 3.4E-08 51.6 0.2 41 8-50 521-565 (725)
89 2k2s_B Micronemal protein 6; m 96.1 0.0018 6.3E-08 34.5 1.2 28 66-93 18-50 (61)
90 1n7d_A LDL receptor, low-densi 96.0 0.058 2E-06 41.9 9.4 52 72-132 307-365 (699)
91 2ygo_A WIF-1, WNT inhibitory f 95.6 0.013 4.4E-07 38.2 3.7 27 66-93 154-180 (188)
92 3m0c_C LDL receptor, low-densi 95.2 0.026 8.9E-07 44.6 5.0 51 72-131 325-382 (791)
93 3v65_B Low-density lipoprotein 94.6 0.011 3.7E-07 42.6 1.3 55 29-92 16-82 (386)
94 2i9a_A Urokinase-type plasmino 94.1 0.045 1.6E-06 34.2 3.3 31 21-51 12-47 (145)
95 2fd6_A Urokinase-type plasmino 94.0 0.029 1E-06 34.0 2.2 28 66-93 2-34 (122)
96 3e50_C Protransforming growth 93.9 0.043 1.5E-06 27.9 2.3 27 66-93 15-45 (50)
97 2e26_A Reelin, reeler protein; 93.8 0.012 4E-07 45.8 0.2 45 38-93 521-565 (725)
98 2p26_A Integrin beta-2; hybrid 93.6 0.034 1.2E-06 38.6 2.2 58 24-87 198-263 (280)
99 3v65_B Low-density lipoprotein 93.3 0.023 7.8E-07 40.9 0.9 50 72-130 16-73 (386)
100 3e50_C Protransforming growth 93.3 0.069 2.4E-06 27.1 2.5 27 23-50 15-45 (50)
101 1g1s_A P-selectin; selectin, l 93.3 0.02 6.9E-07 36.0 0.6 28 23-50 126-155 (162)
102 3nt1_A Prostaglandin-endoperox 93.1 0.043 1.5E-06 42.0 2.2 28 23-50 8-39 (587)
103 1g1s_A P-selectin; selectin, l 92.8 0.035 1.2E-06 34.9 1.2 28 66-93 126-155 (162)
104 1q4g_A Prostaglandin G/H synth 92.7 0.044 1.5E-06 41.6 1.7 28 23-50 9-40 (553)
105 1q4g_A Prostaglandin G/H synth 92.3 0.047 1.6E-06 41.5 1.5 32 61-93 5-40 (553)
106 3nt1_A Prostaglandin-endoperox 92.2 0.08 2.7E-06 40.5 2.6 32 61-93 4-39 (587)
107 2i9a_A Urokinase-type plasmino 92.1 0.1 3.5E-06 32.6 2.6 29 65-93 13-46 (145)
108 1iox_A Betacellulin; EGF-like 92.0 0.043 1.5E-06 27.8 0.7 27 66-93 15-45 (50)
109 2p26_A Integrin beta-2; hybrid 91.9 0.059 2E-06 37.4 1.5 59 67-131 198-264 (280)
110 1xdt_R Hbegf, heparin-binding 90.7 0.16 5.5E-06 28.3 2.2 26 66-92 47-76 (79)
111 1n7d_A LDL receptor, low-densi 90.2 0.31 1.1E-05 37.9 4.2 47 34-89 314-365 (699)
112 3fl7_A Ephrin receptor; ATP-bi 89.6 0.16 5.4E-06 38.5 2.1 64 24-88 252-320 (536)
113 3cfw_A L-selectin; EGF, cell a 88.9 0.15 5.1E-06 32.0 1.3 28 23-50 126-155 (164)
114 3m0c_C LDL receptor, low-densi 87.8 0.54 1.8E-05 37.2 4.1 52 29-89 325-383 (791)
115 1g1t_A E-selectin; EGF, adhesi 87.1 0.097 3.3E-06 32.5 -0.4 28 23-50 126-155 (157)
116 3fl7_A Ephrin receptor; ATP-bi 86.1 0.34 1.2E-05 36.6 2.1 63 67-130 252-319 (536)
117 2rnl_A Amphiregulin; AR, color 85.3 0.47 1.6E-05 23.9 1.7 26 24-50 20-49 (50)
118 3cfw_A L-selectin; EGF, cell a 83.9 0.3 1E-05 30.5 0.8 28 66-93 126-155 (164)
119 1g1t_A E-selectin; EGF, adhesi 83.7 0.24 8.1E-06 30.7 0.2 28 66-93 126-155 (157)
120 3asi_A Neurexin-1-alpha; beta- 80.2 1.2 4.2E-05 32.1 2.9 32 61-93 188-222 (410)
121 1apq_A Complement protease C1R 78.6 0.81 2.8E-05 22.8 1.1 19 114-132 24-44 (53)
122 3asi_A Neurexin-1-alpha; beta- 78.4 1.1 3.9E-05 32.3 2.3 28 23-50 192-222 (410)
123 2kl7_A Fibulin-4; secreted, ca 68.2 1.7 5.7E-05 23.4 0.8 9 123-131 55-63 (71)
124 1gl4_A Nidogen-1, entactin; im 63.8 2.3 7.8E-05 29.6 1.0 27 23-49 14-44 (285)
125 3qcw_A Neurexin-1-alpha; synap 62.8 3.7 0.00013 34.2 2.2 32 61-93 1020-1054(1245)
126 3tbd_A Netrin-G2, laminet-2; l 61.7 3.4 0.00012 29.4 1.6 39 21-60 269-310 (338)
127 2ddu_A Reelin; beta-jelly-roll 61.1 1.2 4.2E-05 32.3 -0.8 22 109-132 197-218 (387)
128 3qcw_A Neurexin-1-alpha; synap 59.5 5.1 0.00017 33.4 2.5 28 23-50 626-656 (1245)
129 2jkh_L Factor X light chain; p 57.4 3.2 0.00011 20.9 0.6 16 115-130 14-31 (55)
130 2ddu_A Reelin; beta-jelly-roll 53.4 3.1 0.0001 30.2 0.2 23 23-47 197-219 (387)
131 1n1i_A Merozoite surface prote 52.3 15 0.00052 21.4 3.0 60 67-130 18-84 (105)
132 1gl4_A Nidogen-1, entactin; im 51.6 4.9 0.00017 27.9 1.0 27 66-92 14-44 (285)
133 3t3p_B Integrin beta-3; integr 50.5 8 0.00027 28.8 2.0 16 34-49 457-472 (472)
134 1kig_L Factor XA; glycoprotein 45.7 4.5 0.00015 20.0 0.1 16 115-130 11-28 (51)
135 3g5c_A ADAM 22; alpha/beta fol 44.0 7.9 0.00027 29.1 1.1 26 24-50 456-481 (510)
136 3v4v_B Integrin beta-7; cell a 33.2 9 0.00031 28.8 0.0 15 35-49 479-493 (503)
137 2wph_E Coagulation factor IXA 31.1 20 0.00067 18.3 1.1 16 115-130 12-30 (59)
138 1bx7_A Hirustasin; anti-coagul 28.5 63 0.0022 16.3 5.0 40 66-111 10-51 (55)
No 1
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.89 E-value=2.3e-23 Score=152.80 Aligned_cols=126 Identities=40% Similarity=1.064 Sum_probs=111.8
Q ss_pred cccccCCCCCCCCCCC-CCCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCC----CCCCCCCeecCCCCeee
Q psy11501 7 EVCGPGRFGQNCSQEC-QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINR----CRCQNGAICNPANGQCL 81 (133)
Q Consensus 7 ~~C~~g~~g~~c~~~C-~C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~----~~C~~~~~C~~~~~~C~ 81 (133)
..|++||+|+.|+..| +|.++++|++.+++|.|++||+|..|+..|.++|+|..|... ..|.+++.|....++|.
T Consensus 187 c~C~~g~~G~~C~~~C~~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~ 266 (423)
T 2gy5_A 187 RRCEAQKWGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCS 266 (423)
T ss_dssp CSSCTTEESTTSCEECCCCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEE
T ss_pred CcCCCCCCCCCCCCCCCCCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEE
Confidence 4799999999999888 699999999878999999999999999779999999887643 24777788877789999
Q ss_pred CCCCcccCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCCceeCCCCCccCC
Q psy11501 82 CAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKGQK 133 (133)
Q Consensus 82 C~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g~C~C~~g~~G~~ 133 (133)
|++||.|.+|+..|.+||+|..|+.+|+|.++++|++..+ |.|++||+|.+
T Consensus 267 C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~~-C~C~~G~~G~~ 317 (423)
T 2gy5_A 267 CATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQG-CLCSPGWQGLQ 317 (423)
T ss_dssp CCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTTE-EECCTTCBSTT
T ss_pred eCCCcccccccCccCCCCcCCcccccccCCCCCEecCCCc-eECCCCCcCCC
Confidence 9999999999977999999999988889999999987665 99999999963
No 2
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.75 E-value=4.7e-19 Score=114.77 Aligned_cols=110 Identities=35% Similarity=0.858 Sum_probs=89.4
Q ss_pred CCCCCCCEEecCC----Cee-ecCCCCccCCCCccCCCCCCCCCCCC--------CCCCCCC------CeecCCCCeee-
Q psy11501 22 CQCRNGAECHPAT----GEC-SCQPGFTGSLCEERCPPGTHGPSCIN--------RCRCQNG------AICNPANGQCL- 81 (133)
Q Consensus 22 C~C~~~g~C~~~~----~~C-~C~~g~~G~~C~~~C~~g~~g~~C~~--------~~~C~~~------~~C~~~~~~C~- 81 (133)
|+|.++++|+..+ ++| .|+++|+|.+|+ +|+++|+|..+.. .+.|.+. +.|+..+++|.
T Consensus 1 C~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce-~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~ 79 (162)
T 1klo_A 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE-LCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLK 79 (162)
T ss_dssp CCSCTTCCEEECSSSCCEEECSCCTTEESTTSC-EECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCC
T ss_pred CcCcCcCcccccCCCCCEEeCCCCCCCcCCCCc-CCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccC
Confidence 5788999998643 589 799999999998 7999999865542 2456554 47877789995
Q ss_pred CCCCcccCCCCCCCCCCccCCCCC-------CCCCCCCCC------eeccCCCceeCCCCCccCC
Q psy11501 82 CAPGWMGSVCNVPCTPGMWGQGCT-------VPCECFNGA------SCHHVTGECQCEPGFKGQK 133 (133)
Q Consensus 82 C~~g~~g~~c~~~c~~g~~g~~c~-------~~c~C~~~g------~C~~~~g~C~C~~g~~G~~ 133 (133)
|.++|+|.+|+ +|++||+|..+. .+|.|.+.+ +|+..+++|+|+++|+|.+
T Consensus 80 C~~g~~G~~Ce-~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~ 143 (162)
T 1klo_A 80 CIYNTAGFYCD-RCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRD 143 (162)
T ss_dssp BCTTEETTTTC-EECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTT
T ss_pred CCCCCcCCCcC-cCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCC
Confidence 99999999999 699999998876 356787654 8988889999999999864
No 3
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.68 E-value=9.8e-18 Score=108.54 Aligned_cols=101 Identities=37% Similarity=0.914 Sum_probs=81.6
Q ss_pred CCCccccccccCCCCCCCC--------CCCCCCCC------CEEecCCCeee-cCCCCccCCCCccCCCCCCCCCCC---
Q psy11501 1 MGTHCEEVCGPGRFGQNCS--------QECQCRNG------AECHPATGECS-CQPGFTGSLCEERCPPGTHGPSCI--- 62 (133)
Q Consensus 1 ~g~~c~~~C~~g~~g~~c~--------~~C~C~~~------g~C~~~~~~C~-C~~g~~G~~C~~~C~~g~~g~~C~--- 62 (133)
+|..|+ +|.+||+|..+. .+|.|.++ +.|+..+++|+ |.++|+|.+|+ +|+++|||..+.
T Consensus 28 ~G~~Ce-~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce-~C~~Gy~g~~~~~~~ 105 (162)
T 1klo_A 28 AGKRCE-LCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCD-RCKEGFFGNPLAPNP 105 (162)
T ss_dssp ESTTSC-EECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBCTTEETTTTC-EECTTEEECTTCSSG
T ss_pred cCCCCc-CCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCCCCCcCCCcC-cCchhhcCCccccCC
Confidence 367777 788888886554 24677765 57887799995 99999999998 799999998876
Q ss_pred ----CCCCCCCCC------eecCCCCeeeCCCCcccCCCCCCCCCCccCCCC
Q psy11501 63 ----NRCRCQNGA------ICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGC 104 (133)
Q Consensus 63 ----~~~~C~~~~------~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~c 104 (133)
..+.|.+.+ .|+..+++|.|+++|+|.+|+ +|.++|++...
T Consensus 106 ~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd-~C~~g~~g~~~ 156 (162)
T 1klo_A 106 ADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCG-TCDPGYYNLQS 156 (162)
T ss_dssp GGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCC-EECTTCBCGGG
T ss_pred CCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCC-CCCCCcccCCC
Confidence 335676654 788779999999999999999 69999997654
No 4
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.63 E-value=4.5e-16 Score=110.74 Aligned_cols=113 Identities=37% Similarity=1.005 Sum_probs=53.3
Q ss_pred ccccCCCCCCCCC-CC--CCCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCC
Q psy11501 8 VCGPGRFGQNCSQ-EC--QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAP 84 (133)
Q Consensus 8 ~C~~g~~g~~c~~-~C--~C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~ 84 (133)
.|++||+|..|+. .| +|.++++|.. .+.|.|++||+|..|+.. .|. .+|.++++|.. .++|.|++
T Consensus 168 ~C~~G~~G~~C~~~~C~~~C~~~G~C~~-~~~C~C~~G~~G~~C~~~--------~C~--~~C~~~G~C~~-~~~C~C~~ 235 (324)
T 2ygq_A 168 ECPDGFHGPHCEKALCTPRCMNGGLCVT-PGFCICPPGFYGVNCDKA--------NCS--TTCFNGGTCFY-PGKCICPP 235 (324)
T ss_dssp ECCTTEESSSSCEESSSSCCCTTCEECS-SCCEECCTTCBTTTTCBC--------CCS--SCCCSSCCBSC-SSCBCCCT
T ss_pred ECCCCCcCCCCCCCCCCCCCCCCCEEcC-CCEEeCCCCccCCCcccC--------cCC--CCCCCCCeeCC-CCeeeCCC
Confidence 6888899888875 45 5888888864 678999999998888631 132 25667777754 46788888
Q ss_pred CcccCCCCC-------------------CCCCCccCCCCCC-CC--CCCCCCeeccCCCceeCCCCCccCC
Q psy11501 85 GWMGSVCNV-------------------PCTPGMWGQGCTV-PC--ECFNGASCHHVTGECQCEPGFKGQK 133 (133)
Q Consensus 85 g~~g~~c~~-------------------~c~~g~~g~~c~~-~c--~C~~~g~C~~~~g~C~C~~g~~G~~ 133 (133)
||.|..|+. .|.+||+|..|+. .| .|.++|+|++ .++|.|++||+|.+
T Consensus 236 G~~G~~C~~~~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~-~~~C~C~~G~~G~~ 305 (324)
T 2ygq_A 236 GLEGEQCEISKCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHE-PNKCQCQEGWHGRH 305 (324)
T ss_dssp TCCTTTTC---------------------------------------------------------------
T ss_pred CccCCCCCcCcCCCcCCCCCEECCCCEEECCCCCcCCCCcCCCCCCCCCCCCEECC-CCEeECCCCCcCCC
Confidence 888877753 3667777777753 23 5778899976 57899999999863
No 5
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.61 E-value=5.2e-16 Score=101.10 Aligned_cols=114 Identities=28% Similarity=0.767 Sum_probs=79.8
Q ss_pred ccccCCCCCCCCCCCC----CCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCC-CCCeecCCCCeeeC
Q psy11501 8 VCGPGRFGQNCSQECQ----CRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQ-NGAICNPANGQCLC 82 (133)
Q Consensus 8 ~C~~g~~g~~c~~~C~----C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~-~~~~C~~~~~~C~C 82 (133)
.|++||+|+.|+..|. +.++++|+. +++|.|.+||+|..|+.. .|... |. ..+.|.+ .++|.|
T Consensus 20 ~C~~g~~G~~C~~~C~~~~~c~~~g~C~~-~g~C~C~~G~~G~~C~~~--------~C~~~--C~~~~g~C~~-~~~C~C 87 (169)
T 2vj2_A 20 TCDDYYYGFGCNKFCRPRDDFFGHYACDQ-NGNKTCMEGWMGPECNRA--------ICRQG--CSPKHGSCKL-PGDCRC 87 (169)
T ss_dssp -CCTTEETTTTCEECCCEEETTEEEEECS-SCCEEECTTEESTTSCEE--------CCCTT--CCTTTEECSS-TTCCEE
T ss_pred eCCCcCcCCCcccccCCCCCcCCCCEeCC-CCeeECCCCCcCCCCCCC--------CCCCC--CCCCCcccCC-CCeeEC
Confidence 7999999999987773 666788864 789999999999998731 13222 32 2345543 567777
Q ss_pred CCCcccCCCCC------------------CCCCCccCCCCC-C------CCCCCCCCeeccC---CCceeCCCCCccCC
Q psy11501 83 APGWMGSVCNV------------------PCTPGMWGQGCT-V------PCECFNGASCHHV---TGECQCEPGFKGQK 133 (133)
Q Consensus 83 ~~g~~g~~c~~------------------~c~~g~~g~~c~-~------~c~C~~~g~C~~~---~g~C~C~~g~~G~~ 133 (133)
++||.|..|+. .|.+||+|..|+ + ..+|.++++|++. .++|+|++||+|.+
T Consensus 88 ~~G~~G~~C~~C~~~~~C~~g~C~~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~ 166 (169)
T 2vj2_A 88 QYGWQGLYCDKCIPHPGCVHGICNEPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPN 166 (169)
T ss_dssp CTTEESSSSCEECCCTTCSSEECSSTTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTT
T ss_pred CCCCCCCCcccCCCCCCCCCCCcCCCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcC
Confidence 77777766542 345677777665 2 1368899999874 25999999999974
No 6
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.59 E-value=3.6e-15 Score=109.40 Aligned_cols=69 Identities=43% Similarity=1.132 Sum_probs=61.7
Q ss_pred CCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCCCcccCCCCC
Q psy11501 24 CRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 24 C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~g~~g~~c~~ 93 (133)
|.+++.|...+++|.|++||+|..|+..|.++|+|..|...++|.+++.|+... .|.|++||.|.+|+.
T Consensus 252 C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~-~C~C~~G~~G~~Ce~ 320 (423)
T 2gy5_A 252 CKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ-GCLCSPGWQGLQCER 320 (423)
T ss_dssp TTTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT-EEECCTTCBSTTSCB
T ss_pred CCCCCEECCCCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC-ceECCCCCcCCCCcc
Confidence 666788887789999999999999996799999999999888899999998654 499999999999985
No 7
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.47 E-value=1.9e-13 Score=85.85 Aligned_cols=97 Identities=33% Similarity=0.876 Sum_probs=73.2
Q ss_pred CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCC
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPG 98 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g 98 (133)
+|.++++|.+. .++|.|++||+|..|+....+ |... +|.++++|.+. .++|.|++||.|..|+...
T Consensus 14 ~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~------C~~~-~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~--- 83 (135)
T 2vj3_A 14 PCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNE------CVSN-PCQNDATCLDQIGEFQCICMPGYEGVHCEVNT--- 83 (135)
T ss_dssp SSSTTCEEEECSSSEEEECCTTEESTTSCEECCT------TTTC-CCCSSCEEEECSSCEEEECCTTEESSSSCEEC---
T ss_pred CCCCCCEeECCCCCEEEECCCCCcCCcccccCcc------CCCC-CCCCCCEEeCCCCCceeeCCCCCcCCcceecC---
Confidence 58888999865 569999999999999744333 5443 78888899765 5799999999999886311
Q ss_pred ccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccCC
Q psy11501 99 MWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQK 133 (133)
Q Consensus 99 ~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~~ 133 (133)
..|.. -+|.++++|++..+ +|.|++||+|.+
T Consensus 84 ---~~C~~-~~C~~~g~C~~~~g~~~C~C~~G~~G~~ 116 (135)
T 2vj3_A 84 ---DECAS-SPCLHNGRCLDKINEFQCECPTGFTGHL 116 (135)
T ss_dssp ---CTTTT-CCSTTTCEEEECSSCEEEECCTTEESSS
T ss_pred ---CcccC-CCcCCCCEeECCCCCeEEECCCCCcCCc
Confidence 12221 26888999988654 899999999863
No 8
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.43 E-value=7.3e-13 Score=83.73 Aligned_cols=103 Identities=29% Similarity=0.750 Sum_probs=72.1
Q ss_pred CCCCCCEEecC----CCeeecCCCCccCCCCccCCCCCC------CCCCCCCCCCCCCCeec-------CC--CCeeeCC
Q psy11501 23 QCRNGAECHPA----TGECSCQPGFTGSLCEERCPPGTH------GPSCINRCRCQNGAICN-------PA--NGQCLCA 83 (133)
Q Consensus 23 ~C~~~g~C~~~----~~~C~C~~g~~G~~C~~~C~~g~~------g~~C~~~~~C~~~~~C~-------~~--~~~C~C~ 83 (133)
+|.++++|.+. .+.|.|++||+|..|+........ -..|... +|.++++|. +. .++|.|+
T Consensus 7 pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~-~C~~~g~C~~~~~~~~~~~~~~~C~C~ 85 (143)
T 4d90_A 7 PCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPN-PCHNGGTCEISEAYRGDTFIGYVCKCP 85 (143)
T ss_dssp CCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSC-CCCTTCEEEECCCEETTEECCEEEECC
T ss_pred cCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCC-CCCCCCEecCCCccccCCCCCeEeECc
Confidence 57888999853 479999999999999742211111 1224332 688888997 32 6799999
Q ss_pred CCcccCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccCC
Q psy11501 84 PGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQK 133 (133)
Q Consensus 84 ~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~~ 133 (133)
+||.|..|+... ..|. .-+|.++++|++..+ +|.|++||+|++
T Consensus 86 ~G~~G~~C~~~i------~~C~-~~~C~~~~~C~~~~g~~~C~C~~G~~G~~ 130 (143)
T 4d90_A 86 RGFNGIHCQHNI------NECE-VEPCKNGGICTDLVANYSCECPGEFMGRN 130 (143)
T ss_dssp TTEESTTSCEEC------CTTT-TCCSCTTCEEEEETTEEEEECCTTCBSTT
T ss_pred CCCcCCCcccCC------CcCC-CCCCCCCCEeECCCCCeEeECCCCCccCC
Confidence 999999886210 1222 126888999988655 899999999974
No 9
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.40 E-value=7.9e-13 Score=94.04 Aligned_cols=97 Identities=40% Similarity=1.108 Sum_probs=57.9
Q ss_pred CCCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCCCcccCCCCC---------
Q psy11501 23 QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNV--------- 93 (133)
Q Consensus 23 ~C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~g~~g~~c~~--------- 93 (133)
+|.++|+|.+ .+.|.|++||+|..|+.. .|.. +|.++++|.. .++|.|++||.|..|+.
T Consensus 154 ~C~~~G~C~~-~~~C~C~~G~~G~~C~~~--------~C~~--~C~~~G~C~~-~~~C~C~~G~~G~~C~~~~C~~~C~~ 221 (324)
T 2ygq_A 154 GCRNGGFCNE-RRICECPDGFHGPHCEKA--------LCTP--RCMNGGLCVT-PGFCICPPGFYGVNCDKANCSTTCFN 221 (324)
T ss_dssp CCCSSCEECT-TSCEECCTTEESSSSCEE--------SSSS--CCCTTCEECS-SCCEECCTTCBTTTTCBCCCSSCCCS
T ss_pred CCCCCCEECC-CCeEECCCCCcCCCCCCC--------CCCC--CCCCCCEEcC-CCEEeCCCCccCCCcccCcCCCCCCC
Confidence 5889999975 689999999999999842 1432 5788899964 68999999999998863
Q ss_pred ----------CCCCCccCCCCCC-CC--CCCCCCeeccCCCceeCCCCCccC
Q psy11501 94 ----------PCTPGMWGQGCTV-PC--ECFNGASCHHVTGECQCEPGFKGQ 132 (133)
Q Consensus 94 ----------~c~~g~~g~~c~~-~c--~C~~~g~C~~~~g~C~C~~g~~G~ 132 (133)
.|.+||+|..|+. .| +|.++|+|+. .++|.|++||+|.
T Consensus 222 ~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~-~~~C~C~~G~~G~ 272 (324)
T 2ygq_A 222 GGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIG-KSKCKCSKGYQGD 272 (324)
T ss_dssp SCCBSCSSCBCCCTTCCTTTTC------------------------------
T ss_pred CCeeCCCCeeeCCCCccCCCCCcCcCCCcCCCCCEECC-CCEEECCCCCcCC
Confidence 3788999998864 23 5778889974 5689999999985
No 10
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.36 E-value=3.3e-13 Score=101.51 Aligned_cols=98 Identities=31% Similarity=0.831 Sum_probs=46.9
Q ss_pred CCeeecCCCCccCCCCccCCCCCCCCCCCCC-----CCCCCC------CeecCCCCeeeCCCCcccCCCCCCCCCCccCC
Q psy11501 34 TGECSCQPGFTGSLCEERCPPGTHGPSCINR-----CRCQNG------AICNPANGQCLCAPGWMGSVCNVPCTPGMWGQ 102 (133)
Q Consensus 34 ~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~-----~~C~~~------~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~ 102 (133)
.+.|.|.++|.|..|+ .|.+||+|..+... ++|.+. +.|+..+++|.|+++|.|.+|+ +|.+||++.
T Consensus 406 ~~~C~C~~g~~G~~C~-~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce-~C~~G~~g~ 483 (525)
T 4aqs_A 406 AGQCRCKLHVEGERCD-VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-QCLPQHWGL 483 (525)
T ss_dssp SSCCCBCTTEETTTTC-EECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTC-C--------
T ss_pred CCccCCCCCCCCCccc-CCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcc-cCCCCccCC
Confidence 4689999999999998 89999999876542 234443 4455557899999999999999 799999975
Q ss_pred CCC----CCCCCCCCCe----eccCCCceeCCCCCccCC
Q psy11501 103 GCT----VPCECFNGAS----CHHVTGECQCEPGFKGQK 133 (133)
Q Consensus 103 ~c~----~~c~C~~~g~----C~~~~g~C~C~~g~~G~~ 133 (133)
... .+|+|.+++. |+..+++|.|++||+|.+
T Consensus 484 ~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~ 522 (525)
T 4aqs_A 484 SNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQ 522 (525)
T ss_dssp ---------------------------------------
T ss_pred CCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCC
Confidence 322 2457777664 545577999999999964
No 11
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.33 E-value=3.2e-12 Score=98.50 Aligned_cols=110 Identities=37% Similarity=0.927 Sum_probs=73.5
Q ss_pred cccccCCCCCCCCC-----------CCC-------CCCCCEEecCCCeeecC----CCCccCCCCccCCCCCCCCCCCCC
Q psy11501 7 EVCGPGRFGQNCSQ-----------ECQ-------CRNGAECHPATGECSCQ----PGFTGSLCEERCPPGTHGPSCINR 64 (133)
Q Consensus 7 ~~C~~g~~g~~c~~-----------~C~-------C~~~g~C~~~~~~C~C~----~g~~G~~C~~~C~~g~~g~~C~~~ 64 (133)
+.|++||+|..|+. .|. |.++|+|. .++|.|. +||+|..|+..-. .|...
T Consensus 460 C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~g~C~C~~~~~~Gy~G~~Ce~~~~------~C~~~ 531 (690)
T 3fcs_B 460 CRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL--CGQCVCHSSDFGKITGKYCECDDF------SCVRY 531 (690)
T ss_dssp EEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC--SSSEEECCCSSCCCBSTTSCBCSS------CCCBS
T ss_pred eEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE--CCeeEeecCCCCCeeCCCcCcccC------cCcCC
Confidence 37999999999863 252 77889997 5899999 9999999973211 14321
Q ss_pred --CCCCCCCeecCCCCeeeCCCCcccCCCCCCCCCCccCCCCCC--CCCCCCCCeeccCCCceeC-CCCCccC
Q psy11501 65 --CRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTV--PCECFNGASCHHVTGECQC-EPGFKGQ 132 (133)
Q Consensus 65 --~~C~~~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~--~c~C~~~g~C~~~~g~C~C-~~g~~G~ 132 (133)
.+|.+++.|.. ++|.|.+||.|..|+ |+.. -..|.. ...|.++|+|.. ++|.| ++||+|.
T Consensus 532 ~~~~C~~~G~C~~--g~C~C~~Gy~G~~Ce--C~~~--~~~C~~~~g~~C~~~G~C~~--g~C~C~~~Gy~G~ 596 (690)
T 3fcs_B 532 KGEMCSGHGQCSC--GDCLCDSDWTGYYCN--CTTR--TDTCMSSNGLLCSGRGKCEC--GSCVCIQPGSYGD 596 (690)
T ss_dssp SSSBGGGSEEEET--TEEEECTTEESSSSC--EECC--CTTTBCTTSSBTSSSCEEET--TEEECCSTTCBST
T ss_pred CCCCCCCCCEecC--CeeECcCCCcCCCCc--cCCC--CCcccCCCCCCCCCCCEEeC--CEEECCCCCccCC
Confidence 25777788874 899999999999887 1100 011211 024666677743 56777 6777664
No 12
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.28 E-value=3.9e-12 Score=97.85 Aligned_cols=110 Identities=30% Similarity=0.802 Sum_probs=78.8
Q ss_pred ccccCCCCCCCCC------------CCC-------CCCCCEEecCCCeeecC------CCCccCCCCccCCCCCCCCCCC
Q psy11501 8 VCGPGRFGQNCSQ------------ECQ-------CRNGAECHPATGECSCQ------PGFTGSLCEERCPPGTHGPSCI 62 (133)
Q Consensus 8 ~C~~g~~g~~c~~------------~C~-------C~~~g~C~~~~~~C~C~------~g~~G~~C~~~C~~g~~g~~C~ 62 (133)
.|.+||+|..|+. .|. |+++|.|. .++|.|. +||.|..|+..-. .|.
T Consensus 449 ~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~G~C~C~~~~~~~~G~~G~~Ce~~~~------~C~ 520 (687)
T 3k6s_B 449 RCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDVPGKLIYGQYCECDTI------NCE 520 (687)
T ss_dssp EECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEE--TTEEEECCCCSTTCCEESTTSCEESS------CSC
T ss_pred EcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEe--CCEEEcCCCCCCCCCccccccccccc------ccc
Confidence 6999999999971 362 78889998 5799999 9999999973211 133
Q ss_pred C--CCCCCC--CCeecCCCCeeeCCCCcccCCCCCCCCCCccCCCCCC--CCCCCCCCeeccCCCceeCCCCCccCC
Q psy11501 63 N--RCRCQN--GAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTV--PCECFNGASCHHVTGECQCEPGFKGQK 133 (133)
Q Consensus 63 ~--~~~C~~--~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~--~c~C~~~g~C~~~~g~C~C~~g~~G~~ 133 (133)
. ..+|.+ +|.|. .++|.|.+||.|..|+. +... ..|.. ...|.++|+|+. ++|.|++||+|.+
T Consensus 521 ~~~~~~C~~~~~G~C~--~g~C~C~~G~~G~~Cec--~~~~--~~C~~~~g~~Cs~~G~C~~--g~C~C~~Gy~G~~ 589 (687)
T 3k6s_B 521 RYNGQVCGGPGRGLCF--CGKCRCHPGFEGSACQC--ERTT--EGCLNPRRVECSGRGRCRC--NVCECHSGYQLPL 589 (687)
T ss_dssp EETTEETSHHHHEEEE--TTEEEECTTCCSTTSCS--CCSS--CTTBCTTCSBTSSSCCBCS--SCBCCSTTCCTTT
T ss_pred CCCCcCcCCCCCCeEE--CCEEEcCCCCcCCCCcc--CCCC--CCCCCCCCCCCCCCCcCCC--CEEECCCCCcCCC
Confidence 1 124776 78887 47999999999999972 2110 12221 125788899965 7899999999863
No 13
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.20 E-value=3e-11 Score=75.70 Aligned_cols=79 Identities=34% Similarity=0.837 Sum_probs=63.1
Q ss_pred ccccCCCCCCCCC---CC---CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--C
Q psy11501 8 VCGPGRFGQNCSQ---EC---QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPA--N 77 (133)
Q Consensus 8 ~C~~g~~g~~c~~---~C---~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~ 77 (133)
.|++||+|..|+. +| +|.++++|.+. .++|.|++||+|..|+....+ |... +|.++++|.+. .
T Consensus 31 ~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~------C~~~-~C~~~g~C~~~~g~ 103 (135)
T 2vj3_A 31 QCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDE------CASS-PCLHNGRCLDKINE 103 (135)
T ss_dssp ECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECCT------TTTC-CSTTTCEEEECSSC
T ss_pred ECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCCc------ccCC-CcCCCCEeECCCCC
Confidence 6999999999963 45 58888999864 569999999999999744333 5443 78888999765 6
Q ss_pred CeeeCCCCcccCCCCC
Q psy11501 78 GQCLCAPGWMGSVCNV 93 (133)
Q Consensus 78 ~~C~C~~g~~g~~c~~ 93 (133)
++|.|++||.|..|+.
T Consensus 104 ~~C~C~~G~~G~~C~~ 119 (135)
T 2vj3_A 104 FQCECPTGFTGHLCQV 119 (135)
T ss_dssp EEEECCTTEESSSSCE
T ss_pred eEEECCCCCcCCccCc
Confidence 7999999999998863
No 14
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.19 E-value=3.5e-11 Score=75.91 Aligned_cols=79 Identities=35% Similarity=0.831 Sum_probs=62.3
Q ss_pred ccccCCCCCCCCC---------------CC---CCCCCCEEec---------CCCeeecCCCCccCCCCccCCCCCCCCC
Q psy11501 8 VCGPGRFGQNCSQ---------------EC---QCRNGAECHP---------ATGECSCQPGFTGSLCEERCPPGTHGPS 60 (133)
Q Consensus 8 ~C~~g~~g~~c~~---------------~C---~C~~~g~C~~---------~~~~C~C~~g~~G~~C~~~C~~g~~g~~ 60 (133)
.|++||+|..|+. +| +|.++++|.. ..+.|.|++||+|..|+....+
T Consensus 26 ~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~~i~~------ 99 (143)
T 4d90_A 26 ECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQHNINE------ 99 (143)
T ss_dssp ECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCEECCT------
T ss_pred ECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCcccCCCc------
Confidence 6999999998864 24 4888899972 2578999999999999744333
Q ss_pred CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501 61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~ 93 (133)
|... +|.++++|.+. .++|.|++||.|.+++.
T Consensus 100 C~~~-~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 100 CEVE-PCKNGGICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp TTTC-CSCTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred CCCC-CCCCCCEeECCCCCeEeECCCCCccCCcee
Confidence 5533 78888999755 56899999999999875
No 15
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.14 E-value=7e-11 Score=74.64 Aligned_cols=101 Identities=24% Similarity=0.655 Sum_probs=69.1
Q ss_pred CCCCCCEEecCCCeeecCCCCccC---------CCCccCCCCCCCCCCCCC--CCCCCCCeecCC--CCeeeCCCCcccC
Q psy11501 23 QCRNGAECHPATGECSCQPGFTGS---------LCEERCPPGTHGPSCINR--CRCQNGAICNPA--NGQCLCAPGWMGS 89 (133)
Q Consensus 23 ~C~~~g~C~~~~~~C~C~~g~~G~---------~C~~~C~~g~~g~~C~~~--~~C~~~~~C~~~--~~~C~C~~g~~g~ 89 (133)
+|.++++|++ +++|.|++||+|. .|+ ... .|... .+|.+++.|.+. .++|.|++||.|.
T Consensus 8 ~C~~~~~C~~-~~~C~C~~G~~g~~~~~~~~~~~C~-did------eC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~ 79 (143)
T 2bou_A 8 WCPQDSSCVN-ATACRCNPGFSSFSEIITTPMETCD-DIN------ECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPV 79 (143)
T ss_dssp TCCTTEEESS-SSCEEECTTEECSSSSBCSTTCCCE-ECC------GGGC----CCCTTEEEEECSSCEEEEECTTEEET
T ss_pred cCCCCCEEcC-CCEEeCCCCCcCccccccCCCCcCC-ccc------cccCCCCCCCCCCCEEEcCCCCeEeECCCCcccC
Confidence 4778899986 5899999999984 443 111 24432 257777888765 6799999999998
Q ss_pred CCCCCCCCCccCCCCCCC-------CCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501 90 VCNVPCTPGMWGQGCTVP-------CECFNGASCHHVTG--ECQCEPGFKGQ 132 (133)
Q Consensus 90 ~c~~~c~~g~~g~~c~~~-------c~C~~~g~C~~~~g--~C~C~~g~~G~ 132 (133)
.++..+. ...+..|++. -+|.++++|+++.+ +|.|++||+|.
T Consensus 80 ~~~~~~~-~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~ 130 (143)
T 2bou_A 80 SGAKTFK-NESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPR 130 (143)
T ss_dssp TCCSCBS-SGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBC
T ss_pred cCccccc-cCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccC
Confidence 6653221 1122233321 25778899998765 89999999986
No 16
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.14 E-value=3e-11 Score=78.48 Aligned_cols=41 Identities=34% Similarity=1.015 Sum_probs=32.9
Q ss_pred ccccCCCCCCCCC-CC--CCC-CCCEEecCCCeeecCCCCccCCCC
Q psy11501 8 VCGPGRFGQNCSQ-EC--QCR-NGAECHPATGECSCQPGFTGSLCE 49 (133)
Q Consensus 8 ~C~~g~~g~~c~~-~C--~C~-~~g~C~~~~~~C~C~~g~~G~~C~ 49 (133)
+|++||+|..|+. .| .|. .++.|.+ +++|.|++||+|..|+
T Consensus 53 ~C~~G~~G~~C~~~~C~~~C~~~~g~C~~-~~~C~C~~G~~G~~C~ 97 (169)
T 2vj2_A 53 TCMEGWMGPECNRAICRQGCSPKHGSCKL-PGDCRCQYGWQGLYCD 97 (169)
T ss_dssp EECTTEESTTSCEECCCTTCCTTTEECSS-TTCCEECTTEESSSSC
T ss_pred ECCCCCcCCCCCCCCCCCCCCCCCcccCC-CCeeECCCCCCCCCcc
Confidence 6999999999875 35 354 5577865 7899999999999887
No 17
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.12 E-value=1.6e-12 Score=85.63 Aligned_cols=111 Identities=27% Similarity=0.685 Sum_probs=77.6
Q ss_pred ccccCCCCC---CCCC--CCC-------CCCCCEEecC-------CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCC
Q psy11501 8 VCGPGRFGQ---NCSQ--ECQ-------CRNGAECHPA-------TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQ 68 (133)
Q Consensus 8 ~C~~g~~g~---~c~~--~C~-------C~~~g~C~~~-------~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~ 68 (133)
.|++||+|. .|++ +|. |.++++|.+. .++|.|++||+|..++ |.. ..|... +|.
T Consensus 28 ~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~--C~~----d~C~~~-~C~ 100 (186)
T 1z1y_A 28 MCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDT--CVL----DVCQYX-NCG 100 (186)
T ss_dssp EECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTE--EEE----GGGTTC-CCC
T ss_pred ECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCC--CCC----CcCcCC-CCC
Confidence 699999987 5643 453 6677888753 4689999999998653 211 125443 688
Q ss_pred CCCeec----CC--CCeeeCCCCccc-----CCCCCCCCCCccCCCCCCCCCC-CCCCeeccCCC--ceeCCCCCccC
Q psy11501 69 NGAICN----PA--NGQCLCAPGWMG-----SVCNVPCTPGMWGQGCTVPCEC-FNGASCHHVTG--ECQCEPGFKGQ 132 (133)
Q Consensus 69 ~~~~C~----~~--~~~C~C~~g~~g-----~~c~~~c~~g~~g~~c~~~c~C-~~~g~C~~~~g--~C~C~~g~~G~ 132 (133)
+++.|. +. .++|.|++||.| ..|+.. ....|.. +| .++++|++..+ +|.|++||+|.
T Consensus 101 ~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~-----~~~~C~~--~C~~~~~~C~n~~g~y~C~C~~G~~g~ 171 (186)
T 1z1y_A 101 ESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXT-----GETACQL--XCNTDNEVCXNVEGVYXCQCMEGFTFD 171 (186)
T ss_dssp TTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEE-----ECCCCCC--CCCTTTEEEEEETTEEEEEECTTCEEE
T ss_pred CCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEc-----CCCcccc--cccccCcceecCCCCeeeECCCCCccC
Confidence 888997 54 579999999998 445421 0012322 67 78899988665 89999999985
No 18
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.12 E-value=2.4e-10 Score=88.19 Aligned_cols=102 Identities=30% Similarity=0.840 Sum_probs=71.8
Q ss_pred ccc----cCCCCCCCC---CCCC------CCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCC--CCCCCCCCe
Q psy11501 8 VCG----PGRFGQNCS---QECQ------CRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCIN--RCRCQNGAI 72 (133)
Q Consensus 8 ~C~----~g~~g~~c~---~~C~------C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~--~~~C~~~~~ 72 (133)
.|+ +||+|..|+ ..|. |.++|.|.. ++|.|.+||+|..|+ |+... ..|.. ..+|.+++.
T Consensus 507 ~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~--g~C~C~~Gy~G~~Ce--C~~~~--~~C~~~~g~~C~~~G~ 580 (690)
T 3fcs_B 507 VCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC--GDCLCDSDWTGYYCN--CTTRT--DTCMSSNGLLCSGRGK 580 (690)
T ss_dssp EECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET--TEEEECTTEESSSSC--EECCC--TTTBCTTSSBTSSSCE
T ss_pred EeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC--CeeECcCCCcCCCCc--cCCCC--CcccCCCCCCCCCCCE
Confidence 578 999999996 2463 777899974 899999999999997 21100 12432 136888899
Q ss_pred ecCCCCeeeC-CCCcccCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCCceeCCCCCccC
Q psy11501 73 CNPANGQCLC-APGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKGQ 132 (133)
Q Consensus 73 C~~~~~~C~C-~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g~C~C~~g~~G~ 132 (133)
|. .++|.| .+||.|..|+. |+ .|. -+|.++++|.+ |..+|+|.
T Consensus 581 C~--~g~C~C~~~Gy~G~~Ce~-C~------~C~--~~C~~~g~Cv~------C~~g~tG~ 624 (690)
T 3fcs_B 581 CE--CGSCVCIQPGSYGDTCEK-CP------TCP--DACTFKKECVE------CKKFDRGA 624 (690)
T ss_dssp EE--TTEEECCSTTCBSTTSCB-CT------TSC--CTTTSCCGGGT------TTTTCCSS
T ss_pred Ee--CCEEECCCCCccCCCcCc-CC------CCC--CCCCCCCCccc------CCCCCccC
Confidence 97 479999 99999999984 32 121 15666777754 66666664
No 19
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.04 E-value=9.4e-11 Score=88.22 Aligned_cols=89 Identities=34% Similarity=0.821 Sum_probs=36.9
Q ss_pred CCccccccccCCCCCCCCC-----CCCCCCCC------EEecCCCeeecCCCCccCCCCccCCCCCCCCCCC----CCCC
Q psy11501 2 GTHCEEVCGPGRFGQNCSQ-----ECQCRNGA------ECHPATGECSCQPGFTGSLCEERCPPGTHGPSCI----NRCR 66 (133)
Q Consensus 2 g~~c~~~C~~g~~g~~c~~-----~C~C~~~g------~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~----~~~~ 66 (133)
|..|+ +|.+||+|..+.. +|+|.+.+ .|+..+++|.|++||+|..|+ .|.+||++.... ..++
T Consensus 417 G~~C~-~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce-~C~~G~~g~~~~~~~C~~C~ 494 (525)
T 4aqs_A 417 GERCD-VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-QCLPQHWGLSNDLDGCRPCD 494 (525)
T ss_dssp TTTTC-EECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTC-C-------------------
T ss_pred CCccc-CCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcc-cCCCCccCCCCCCCCCcCCC
Confidence 56777 8999999987764 24555444 455567899999999999998 899999975322 1235
Q ss_pred CCCCCee----cCCCCeeeCCCCcccCCCC
Q psy11501 67 CQNGAIC----NPANGQCLCAPGWMGSVCN 92 (133)
Q Consensus 67 C~~~~~C----~~~~~~C~C~~g~~g~~c~ 92 (133)
|.+++.+ +..+++|.|++||.|.+|+
T Consensus 495 C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ce 524 (525)
T 4aqs_A 495 CDLGGALNNSCSEDSGQCSCLPHMIGRQCN 524 (525)
T ss_dssp ------------------------------
T ss_pred CCCCCccCCccCCCCCeeECCCCCcCCCCC
Confidence 6665544 4447789999999999886
No 20
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.95 E-value=1.6e-12 Score=89.48 Aligned_cols=125 Identities=17% Similarity=0.196 Sum_probs=85.8
Q ss_pred ccccC---CCCCCCCCCC-----CCCCCCEEecC--CCeeecCCCCccCCCCcc---------CCC--------CCCCCC
Q psy11501 8 VCGPG---RFGQNCSQEC-----QCRNGAECHPA--TGECSCQPGFTGSLCEER---------CPP--------GTHGPS 60 (133)
Q Consensus 8 ~C~~g---~~g~~c~~~C-----~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~---------C~~--------g~~g~~ 60 (133)
.+.+| +.|..++..+ +|.++++|++. +|+|.|++||+|.+|+.. +.. .+.|..
T Consensus 16 ~~~pgg~~~~g~~~~~n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~ 95 (267)
T 4fbr_A 16 TWNPGGLWLIGARDKQNVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGAR 95 (267)
T ss_dssp CCEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCC
T ss_pred CcCCCCceeeccccccccccCCCCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCc
Confidence 35555 4555555432 58889999865 789999999999999853 211 123445
Q ss_pred CCCC-----CCCCCCCeecCC--CCeeeCCCCcccCCCCCC--------------CCCC---ccCCCCCCC--C---CCC
Q psy11501 61 CINR-----CRCQNGAICNPA--NGQCLCAPGWMGSVCNVP--------------CTPG---MWGQGCTVP--C---ECF 111 (133)
Q Consensus 61 C~~~-----~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~--------------c~~g---~~g~~c~~~--c---~C~ 111 (133)
|... .+|.++++|.+. +++|.|++||+|.+|+.. |.++ +.|..|... + +|.
T Consensus 96 c~~~~eC~s~pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ 175 (267)
T 4fbr_A 96 DKQNIVAVSIKSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSN 175 (267)
T ss_dssp SSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECS
T ss_pred cccccccCCCCCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCC
Confidence 5433 268888888765 789999999999998852 2222 225555431 1 688
Q ss_pred CCCeeccC--CCceeCCCCCccC
Q psy11501 112 NGASCHHV--TGECQCEPGFKGQ 132 (133)
Q Consensus 112 ~~g~C~~~--~g~C~C~~g~~G~ 132 (133)
++|+|.+. +++|+|++||+|.
T Consensus 176 ngg~C~dg~~~y~C~Cp~Gf~G~ 198 (267)
T 4fbr_A 176 DGGKTLSGTMTYNGEGPIGFRGT 198 (267)
T ss_dssp STTSEEEEEEEETTSCCEEEEEE
T ss_pred CCCEeeCCCCCeEEeCCCCcccc
Confidence 99999764 3489999999985
No 21
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.90 E-value=1.1e-09 Score=73.73 Aligned_cols=97 Identities=31% Similarity=0.754 Sum_probs=66.9
Q ss_pred CCCCCCEEecCCCeeecCCCCccCCCCccCCCCCCC-----CCCCC---CCCCCCCCeecCCCCeeeCCCC------ccc
Q psy11501 23 QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHG-----PSCIN---RCRCQNGAICNPANGQCLCAPG------WMG 88 (133)
Q Consensus 23 ~C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g-----~~C~~---~~~C~~~~~C~~~~~~C~C~~g------~~g 88 (133)
.|+++|+|. .+.|.|.+||+|.+|+ |+.+.+. ..|.. ..+|.++|+|. .++|.|.++ |.|
T Consensus 97 ~Csg~G~C~--~g~C~C~~G~~G~~Ce--c~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~--~g~C~C~~gw~~~~~~~G 170 (217)
T 2p28_B 97 LCHGKGFLE--CGICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDVPGKLIYG 170 (217)
T ss_dssp TTTTSEEEE--TTEEEECTTEESTTSC--EECCCCC-GGGGGGGBSSTTSCBGGGTEEEE--TTEEEECCCCSTTCCEES
T ss_pred ccCCCceEE--CCEEECCCCccCCccc--ccCcccccccCCCcCCCCCCCCCCCCCCEEe--CCceECCCCCCCcccEEC
Confidence 477888997 4899999999999997 4433221 23432 23588888997 578999999 578
Q ss_pred CCCCCCCCCCccCCCCCCC--CCCCCC--CeeccCCCceeCCCCCccCC
Q psy11501 89 SVCNVPCTPGMWGQGCTVP--CECFNG--ASCHHVTGECQCEPGFKGQK 133 (133)
Q Consensus 89 ~~c~~~c~~g~~g~~c~~~--c~C~~~--g~C~~~~g~C~C~~g~~G~~ 133 (133)
..|+.. . ..|... ..|.++ |+|+ .++|.|.+||+|..
T Consensus 171 ~~Ce~~--~----~~C~~~~g~~C~~~~~G~C~--~g~C~C~~G~~G~~ 211 (217)
T 2p28_B 171 QYCECD--T----INCERYNGQVCGGPGRGLCF--CGKCRCHPGFEGSA 211 (217)
T ss_dssp TTSCEE--S----SCSCEETTEETTCTTTEEEE--TTEEEECTTEESTT
T ss_pred CCcccC--C----ccCCCCCCCCCCCCCCcEEe--CCeeECCCCCccCC
Confidence 877621 0 112111 146666 9996 47999999999963
No 22
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.90 E-value=1.2e-12 Score=90.10 Aligned_cols=108 Identities=11% Similarity=0.112 Sum_probs=71.0
Q ss_pred CCCCCCEEecC--CCeeecCCCCccCCCCccC---------CC--------CCCCCCCCCC-----CCCCCCCeecCC--
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFTGSLCEERC---------PP--------GTHGPSCINR-----CRCQNGAICNPA-- 76 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C---------~~--------g~~g~~C~~~-----~~C~~~~~C~~~-- 76 (133)
+|.++++|.+. +|+|.|+.||+|..|+... .. .+.|..|... .+|.++++|.+.
T Consensus 106 pC~ngG~C~~~~~sy~C~C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~ 185 (267)
T 4fbr_A 106 KSNDGGKTLTGTTTYNGEGPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTM 185 (267)
T ss_dssp ECSSTTSEEEEEEEETTSCCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEE
T ss_pred CCCCCCEEecCCccEEeeCCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCC
Confidence 45666777643 6889999999999998521 11 1224444332 257888888755
Q ss_pred CCeeeCCCCcccCCCCCC------------------------CCCCccCCCCCCCCCCCCCCeeccC--CCceeCCCCCc
Q psy11501 77 NGQCLCAPGWMGSVCNVP------------------------CTPGMWGQGCTVPCECFNGASCHHV--TGECQCEPGFK 130 (133)
Q Consensus 77 ~~~C~C~~g~~g~~c~~~------------------------c~~g~~g~~c~~~c~C~~~g~C~~~--~g~C~C~~g~~ 130 (133)
+++|.|++||.|..|+.. |..++....+ ..+|.++|+|++. .+.|.||+||+
T Consensus 186 ~y~C~Cp~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c--~~~c~ngGtC~dg~~sy~CeCp~GF~ 263 (267)
T 4fbr_A 186 TYNGEGPIGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVAL--NVASSDGGKTLAGTMIYNGEGPIGFR 263 (267)
T ss_dssp EETTSCCEEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEE--EEECSSTTSEEEEEEEETTSCCEEEE
T ss_pred CeEEeCCCCccccccccccceeccCCCccCCcccCCCeEEEecCCCCccccC--CcCCCCCCEeeCCCcceeecCCCCcc
Confidence 788999999999987651 1111111111 1157788999774 34899999999
Q ss_pred cC
Q psy11501 131 GQ 132 (133)
Q Consensus 131 G~ 132 (133)
|+
T Consensus 264 G~ 265 (267)
T 4fbr_A 264 AR 265 (267)
T ss_dssp EE
T ss_pred cc
Confidence 85
No 23
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.86 E-value=3.7e-09 Score=81.55 Aligned_cols=78 Identities=35% Similarity=0.951 Sum_probs=59.1
Q ss_pred ccc------cCCCCCCCC---CCCC------CCC--CCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCC--CCCCC
Q psy11501 8 VCG------PGRFGQNCS---QECQ------CRN--GAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCIN--RCRCQ 68 (133)
Q Consensus 8 ~C~------~g~~g~~c~---~~C~------C~~--~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~--~~~C~ 68 (133)
.|+ +||+|..|+ ..|. |.+ +|.|. .++|.|.+||+|..|+ |+... ..|.. ..+|.
T Consensus 496 ~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~--~g~C~C~~G~~G~~Ce--c~~~~--~~C~~~~g~~Cs 569 (687)
T 3k6s_B 496 LCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCF--CGKCRCHPGFEGSACQ--CERTT--EGCLNPRRVECS 569 (687)
T ss_dssp EECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEE--TTEEEECTTCCSTTSC--SCCSS--CTTBCTTCSBTS
T ss_pred EcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEE--CCEEEcCCCCcCCCCc--cCCCC--CCCCCCCCCCCC
Confidence 577 999999997 3574 777 88998 4799999999999997 32210 12332 13578
Q ss_pred CCCeecCCCCeeeCCCCcccCCCCC
Q psy11501 69 NGAICNPANGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 69 ~~~~C~~~~~~C~C~~g~~g~~c~~ 93 (133)
++|.|.. ++|.|.+||.|..|+.
T Consensus 570 ~~G~C~~--g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 570 GRGRCRC--NVCECHSGYQLPLCQE 592 (687)
T ss_dssp SSCCBCS--SCBCCSTTCCTTTTCC
T ss_pred CCCcCCC--CEEECCCCCcCCCCCC
Confidence 8888874 7899999999999984
No 24
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.75 E-value=8.5e-09 Score=60.24 Aligned_cols=73 Identities=25% Similarity=0.609 Sum_probs=52.4
Q ss_pred ccccCCCCCCCCC-CC---CCCCCCEEecCCCeeecCCCCccCCCC-ccCCCCCCCCCCCCCCCCCCCCeecC----CCC
Q psy11501 8 VCGPGRFGQNCSQ-EC---QCRNGAECHPATGECSCQPGFTGSLCE-ERCPPGTHGPSCINRCRCQNGAICNP----ANG 78 (133)
Q Consensus 8 ~C~~g~~g~~c~~-~C---~C~~~g~C~~~~~~C~C~~g~~G~~C~-~~C~~g~~g~~C~~~~~C~~~~~C~~----~~~ 78 (133)
.|.+||.|..|+. +| +|.+. ...++|.|++||+ .|+ .... .|... +|.++++|.+ ..+
T Consensus 5 ~C~~g~~g~~c~~~~c~~~pC~n~----~~~y~C~C~~G~~--~C~~~~~~------~C~~~-pC~ngg~C~~~~~~~~~ 71 (91)
T 1tpg_A 5 ICRDEKTQMIYQQHQSWLRPVLRS----NRVEYCWCNSGRA--QCHSVPVK------SCSEP-RCFNGGTCQQALYFSDF 71 (91)
T ss_dssp CCBCSSSCCBCCSSCEEEEECSSS----SCEEEEECSSSCC--BCCEECEE------ECSSC-CSCTTCEEEEESSSSCE
T ss_pred ECCCCCcCCeECCCcccCCccccC----CCCcEeECCCCCc--ccccCcCC------cccCC-CCCCCCEeecCCCCCCe
Confidence 7999999998864 33 34332 2367899999997 675 1112 25433 7999999974 367
Q ss_pred eeeCCCCcccCCCCC
Q psy11501 79 QCLCAPGWMGSVCNV 93 (133)
Q Consensus 79 ~C~C~~g~~g~~c~~ 93 (133)
+|.|++||.|.+|+.
T Consensus 72 ~C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 72 VCQCPEGFAGKSCEI 86 (91)
T ss_dssp EEECCTTCBSSSCCB
T ss_pred EeECCCCCcCCcCCc
Confidence 899999999999874
No 25
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.73 E-value=2e-08 Score=76.78 Aligned_cols=99 Identities=29% Similarity=0.705 Sum_probs=68.9
Q ss_pred CCCCCCEEecC---CCee-ecCCCCcc--CCCCccCCCCCCCCCCCCC-CCCCCCC---eecCC--CCeee-CCCCcccC
Q psy11501 23 QCRNGAECHPA---TGEC-SCQPGFTG--SLCEERCPPGTHGPSCINR-CRCQNGA---ICNPA--NGQCL-CAPGWMGS 89 (133)
Q Consensus 23 ~C~~~g~C~~~---~~~C-~C~~g~~G--~~C~~~C~~g~~g~~C~~~-~~C~~~~---~C~~~--~~~C~-C~~g~~g~ 89 (133)
+|.++++|.+. +++| .|++||+| ..|+ ...+ |... ..|.+++ +|.+. .++|. |++||.|.
T Consensus 10 PC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDE------C~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~ 82 (634)
T 1yo8_A 10 PCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDE------CALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGN 82 (634)
T ss_dssp CSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCT------TTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEEC
T ss_pred CCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-cccc------ccCCCCcccCCccccceeeccCceecccCCCCcccC
Confidence 67888899864 3789 99999998 6776 3233 5433 1288877 88765 67998 99999998
Q ss_pred CCCC-----------CCCCCccCCCCCC-CCCCCCCCeeccCC----C--ceeCCCCCcc
Q psy11501 90 VCNV-----------PCTPGMWGQGCTV-PCECFNGASCHHVT----G--ECQCEPGFKG 131 (133)
Q Consensus 90 ~c~~-----------~c~~g~~g~~c~~-~c~C~~~g~C~~~~----g--~C~C~~g~~G 131 (133)
.++. .|.. -..|.. .-+|.++++|.+.. + +|.|++||+|
T Consensus 83 ~c~g~g~~~~~~dg~~C~d---ideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~G 139 (634)
T 1yo8_A 83 QPVGVGLEAAKTEKQVCEP---ENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAG 139 (634)
T ss_dssp CCEESSSHHHHSCCCCEEE---CCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEE
T ss_pred ccccccccccccCCCcccc---cccccCCCcccccCccccccccccccceeeeccCCccc
Confidence 7651 1110 112322 12677889998865 3 8999999998
No 26
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.67 E-value=3.2e-09 Score=69.76 Aligned_cols=94 Identities=21% Similarity=0.480 Sum_probs=64.9
Q ss_pred CCCCCCEEecC--CCeeecCCCCccC---CCCccCCCCCCCCCCCC---CCCCCCCCeecCC-------CCeeeCCCCcc
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFTGS---LCEERCPPGTHGPSCIN---RCRCQNGAICNPA-------NGQCLCAPGWM 87 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~G~---~C~~~C~~g~~g~~C~~---~~~C~~~~~C~~~-------~~~C~C~~g~~ 87 (133)
+|.+ ++|.+. .++|.|++||+|. .|+ ...+ |.. ..+|.++++|.+. .++|.|++||.
T Consensus 12 pC~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~-~id~------C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~ 83 (186)
T 1z1y_A 12 ICXN-GQLVQMSNHFXCMCNEGLVHLSENTCE-EXNE------CXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYT 83 (186)
T ss_dssp CCBT-EEEEECSSCEEEEECTTEEEEETTEEE-ECCC------CSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEE
T ss_pred CCCC-CEeECCCCCeEeECCCCCccCCCCccC-CCCc------ccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCc
Confidence 5665 589864 5799999999987 665 2222 552 2367777888654 46899999999
Q ss_pred cCCCCCCCCCCccCCCCCCCCCCCCCCeec----cCC--CceeCCCCCcc
Q psy11501 88 GSVCNVPCTPGMWGQGCTVPCECFNGASCH----HVT--GECQCEPGFKG 131 (133)
Q Consensus 88 g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~----~~~--g~C~C~~g~~G 131 (133)
|..+. |. -..|... +|.++++|+ +.. .+|.|++||+|
T Consensus 84 g~~~~--C~----~d~C~~~-~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g 126 (186)
T 1z1y_A 84 LXEDT--CV----LDVCQYX-NCGESGECIVEYLSEIQSAGCSCAIGXVP 126 (186)
T ss_dssp EETTE--EE----EGGGTTC-CCCTTEEEEEEEETTEEEEEEEECTEEEE
T ss_pred cCCCC--CC----CCcCcCC-CCCCCCEEeeCCcCCCCCceEECCCCCcc
Confidence 97653 11 0123221 588889998 554 38999999988
No 27
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.65 E-value=1.8e-08 Score=58.82 Aligned_cols=78 Identities=27% Similarity=0.601 Sum_probs=51.2
Q ss_pred CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCCCcccCCCC-CCCCCCccCCCCCCCCCCCC
Q psy11501 34 TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCN-VPCTPGMWGQGCTVPCECFN 112 (133)
Q Consensus 34 ~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~g~~g~~c~-~~c~~g~~g~~c~~~c~C~~ 112 (133)
+|.|.|.+||+|..|+. .+ |... +|.++ ...++|.|++||. .|+ .. ...|.. -+|.+
T Consensus 1 sy~C~C~~g~~g~~c~~--~~------c~~~-pC~n~----~~~y~C~C~~G~~--~C~~~~------~~~C~~-~pC~n 58 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQ--HQ------SWLR-PVLRS----NRVEYCWCNSGRA--QCHSVP------VKSCSE-PRCFN 58 (91)
T ss_dssp CCCCCCBCSSSCCBCCS--SC------EEEE-ECSSS----SCEEEEECSSSCC--BCCEEC------EEECSS-CCSCT
T ss_pred CeeeECCCCCcCCeECC--Cc------ccCC-ccccC----CCCcEeECCCCCc--ccccCc------CCcccC-CCCCC
Confidence 47899999999988752 11 2221 34432 1257899999997 564 10 012321 26899
Q ss_pred CCeeccCC----CceeCCCCCccCC
Q psy11501 113 GASCHHVT----GECQCEPGFKGQK 133 (133)
Q Consensus 113 ~g~C~~~~----g~C~C~~g~~G~~ 133 (133)
+|+|++.. .+|.|++||+|.+
T Consensus 59 gg~C~~~~~~~~~~C~C~~G~~G~~ 83 (91)
T 1tpg_A 59 GGTCQQALYFSDFVCQCPEGFAGKS 83 (91)
T ss_dssp TCEEEEESSSSCEEEECCTTCBSSS
T ss_pred CCEeecCCCCCCeEeECCCCCcCCc
Confidence 99998753 3899999999963
No 28
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=98.61 E-value=3.9e-08 Score=71.51 Aligned_cols=82 Identities=33% Similarity=0.848 Sum_probs=62.5
Q ss_pred CCCCCCCCE-EecC------CCeeecCCCCccCCCCccCCCCCCCC-----------CCCCCCCCCCCC-eec-------
Q psy11501 21 ECQCRNGAE-CHPA------TGECSCQPGFTGSLCEERCPPGTHGP-----------SCINRCRCQNGA-ICN------- 74 (133)
Q Consensus 21 ~C~C~~~g~-C~~~------~~~C~C~~g~~G~~C~~~C~~g~~g~-----------~C~~~~~C~~~~-~C~------- 74 (133)
+|.|.+++. |+.. .++|.|..+++|..|+ +|.++|+|. .|. .|.|..++ .|.
T Consensus 265 ~C~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CE-rC~pGy~g~p~~~at~~~~~~C~-pC~Cnghs~~C~~d~~~~~ 342 (403)
T 2y38_A 265 RCVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCD-RCCPGFNQQPWKPATTDSANECQ-SCNCHGHAYDCYYDPEVDR 342 (403)
T ss_dssp ECCCTTBCSCEEESCTTSTTCEEECCCTTEESSSCC-EECTTCCSSCCCCCCSSCCCCCC-CCCCTTSCSCEEECHHHHH
T ss_pred ccccCCCccccCCCCCCCccceEeECcCcCcCCCCC-CCCccccCCcccccccCCCcccc-ccccCCCCcccccCccccc
Confidence 578887765 8632 3579999999999998 899999975 352 34565543 352
Q ss_pred -----------CCCCeee-CCCCcccCCCCCCCCCCccCCCCC
Q psy11501 75 -----------PANGQCL-CAPGWMGSVCNVPCTPGMWGQGCT 105 (133)
Q Consensus 75 -----------~~~~~C~-C~~g~~g~~c~~~c~~g~~g~~c~ 105 (133)
...++|. |..++.|.+|+ .|.+||+|....
T Consensus 343 ~~~s~~~~~~~~~~G~C~~C~~nt~G~~CE-rC~~GYyg~p~~ 384 (403)
T 2y38_A 343 REASQNQDNVYQGGGVCLDCQHHTTGINCE-RCLPGFFRAPDQ 384 (403)
T ss_dssp TTCCCCTTSCSCCCEEESSCCSSEESTTSC-EECTTCEECTTS
T ss_pred ccccccccccCCCCCCCCCCcCcCcCCCCC-cCCCCccCCCCC
Confidence 2367995 99999999999 799999987643
No 29
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.60 E-value=9.6e-09 Score=75.02 Aligned_cols=102 Identities=22% Similarity=0.480 Sum_probs=32.1
Q ss_pred CCCCCCC-CEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCC---------------CCCCCC-CCeecCCCCeee
Q psy11501 21 ECQCRNG-AECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCIN---------------RCRCQN-GAICNPANGQCL 81 (133)
Q Consensus 21 ~C~C~~~-g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~---------------~~~C~~-~~~C~~~~~~C~ 81 (133)
.|.|..+ ..|... .+.|.|..+++|..|+ .|.++|++..+.. .+.|.. +..|+...+.|.
T Consensus 296 ~C~CnGHas~C~~~~g~~~C~C~~~ttG~~CE-~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~t~~C~ 374 (426)
T 3zyj_B 296 RCKCNLHATVCVYDNSKLTCECEHNTTGPDCG-KCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNELLHCQ 374 (426)
T ss_dssp EECCSSSCSCEEEETTEEEECCCTTEESSSSC-EECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC---------------
T ss_pred cCcCCCchhhcCCCCCCceeeCCCCCcCCCcc-ccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccCcccCC
Confidence 4678766 478754 4589999999999998 8999987543321 112222 223443333343
Q ss_pred ----CCCCcccCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCCceeCCCCC
Q psy11501 82 ----CAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGF 129 (133)
Q Consensus 82 ----C~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g~C~C~~g~ 129 (133)
|..+. .| .|++||+|..|+ .+.|.++|+|+..+|+|.-+.|.
T Consensus 375 ngg~C~~~~---~C--~C~~G~~G~~Ce-~c~C~~~g~C~~~~Gqc~~~~~~ 420 (426)
T 3zyj_B 375 NGGTCHNNV---RC--LCPAAYTGILCE-KLRCEEAGSCGSDSGQGAPPHGT 420 (426)
T ss_dssp ----------------------------------------------------
T ss_pred CCCCcCCCC---CC--cCCCCCcCCCCc-CCCCCCCCcccCCCCccCCCCCc
Confidence 33322 44 466777776664 45888999999989998877664
No 30
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.58 E-value=1.8e-08 Score=74.86 Aligned_cols=73 Identities=36% Similarity=0.996 Sum_probs=34.8
Q ss_pred ccccCCCCCCCCC-CC--CCCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCC
Q psy11501 8 VCGPGRFGQNCSQ-EC--QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAP 84 (133)
Q Consensus 8 ~C~~g~~g~~c~~-~C--~C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~ 84 (133)
.|..+|+|..|+. .| +|.+ ++|.. .++|.|.+||+|..|+.. .|.. +|.++++|.. .++|.|++
T Consensus 380 ~C~~~~~g~~c~~~~C~~~C~n-G~C~~-~~~C~C~~G~~G~~C~~~--------~C~~--~C~~~g~C~~-~~~C~C~~ 446 (463)
T 2wg3_C 380 ECRATVQPAQTLTSECSRLCRN-GYCTP-TGKCCCSPGWEGDFCRTA--------KCEP--ACRHGGVCVR-PNKCLCKK 446 (463)
T ss_dssp GGCCCCCCCCCCCCHHHHHCCS-EEECT-TSCEEECTTEESTTSCEE--------CC-----------------------
T ss_pred cCCCCCcCCCCccccccCCCCC-CccCC-CCeECCCCCcCCCcCCcC--------cCCC--CCCCCCEECC-CCEEECCC
Confidence 7899999998875 35 5776 89975 569999999999999731 2543 6888889974 37899999
Q ss_pred CcccCCCCC
Q psy11501 85 GWMGSVCNV 93 (133)
Q Consensus 85 g~~g~~c~~ 93 (133)
||.|..|+.
T Consensus 447 G~~G~~C~~ 455 (463)
T 2wg3_C 447 GYLGPQCEQ 455 (463)
T ss_dssp ---------
T ss_pred CcccCCCCC
Confidence 999998874
No 31
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.53 E-value=2.3e-08 Score=62.98 Aligned_cols=89 Identities=22% Similarity=0.640 Sum_probs=59.7
Q ss_pred ccccCCCC---------CCCCC--CC------CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCC------CC
Q psy11501 8 VCGPGRFG---------QNCSQ--EC------QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPS------CI 62 (133)
Q Consensus 8 ~C~~g~~g---------~~c~~--~C------~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~------C~ 62 (133)
.|++||+| ..|++ +| +|.++++|.+. .++|.|++||+|..++..+.. ..+.. |.
T Consensus 22 ~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~-~~~~~C~dideC~ 100 (143)
T 2bou_A 22 RCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKN-ESENTCQDVDECS 100 (143)
T ss_dssp EECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSS-GGGCCEEECCHHH
T ss_pred eCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCcccccc-CCCCCcCCccCcc
Confidence 69999998 35642 34 47777899864 679999999999865421110 01111 32
Q ss_pred C-CCCCCCCCeecCC--CCeeeCCCCcccCCCCCCCCC
Q psy11501 63 N-RCRCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTP 97 (133)
Q Consensus 63 ~-~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~ 97 (133)
. ..+|.++++|.+. .++|.|++||+|......|.+
T Consensus 101 ~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~ 138 (143)
T 2bou_A 101 SGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQK 138 (143)
T ss_dssp HTCCCCCTTSEEEECSSCEEEECCSSSCBCTTCCSSBT
T ss_pred CcCCCCCCCCEEECCCCCEEeeCCCCcccCCCCccCcc
Confidence 1 2367777889765 678999999999877655543
No 32
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.48 E-value=4.7e-08 Score=65.75 Aligned_cols=76 Identities=33% Similarity=0.866 Sum_probs=55.2
Q ss_pred ccccCCCCCCCCC------------CC-------CCCCCCEEecCCCeeecCCC------CccCCCCccCCCCCCCCCCC
Q psy11501 8 VCGPGRFGQNCSQ------------EC-------QCRNGAECHPATGECSCQPG------FTGSLCEERCPPGTHGPSCI 62 (133)
Q Consensus 8 ~C~~g~~g~~c~~------------~C-------~C~~~g~C~~~~~~C~C~~g------~~G~~C~~~C~~g~~g~~C~ 62 (133)
.|.+||+|..|+- .| +|+++|+|. .++|.|.++ |+|.+|+..-. .|.
T Consensus 110 ~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~--~g~C~C~~gw~~~~~~~G~~Ce~~~~------~C~ 181 (217)
T 2p28_B 110 RCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDVPGKLIYGQYCECDTI------NCE 181 (217)
T ss_dssp EECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEE--TTEEEECCCCSTTCCEESTTSCEESS------CSC
T ss_pred ECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEe--CCceECCCCCCCcccEECCCcccCCc------cCC
Confidence 6999999998862 13 367778887 579999999 58999972111 132
Q ss_pred CC--CCCCCC--CeecCCCCeeeCCCCcccCCCCC
Q psy11501 63 NR--CRCQNG--AICNPANGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 63 ~~--~~C~~~--~~C~~~~~~C~C~~g~~g~~c~~ 93 (133)
.. .+|.++ |+|. .++|.|.+||.|..|+.
T Consensus 182 ~~~g~~C~~~~~G~C~--~g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 182 RYNGQVCGGPGRGLCF--CGKCRCHPGFEGSACQH 214 (217)
T ss_dssp EETTEETTCTTTEEEE--TTEEEECTTEESTTSCE
T ss_pred CCCCCCCCCCCCcEEe--CCeeECCCCCccCCcCC
Confidence 21 147666 8897 47999999999998863
No 33
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=98.44 E-value=8.9e-08 Score=69.19 Aligned_cols=86 Identities=26% Similarity=0.612 Sum_probs=59.9
Q ss_pred CCCCCCCCEE-e---cCCCeeecCCCCccCCCCccCCCCCCCCCCCC----------CCCCCCCC-ee---------cCC
Q psy11501 21 ECQCRNGAEC-H---PATGECSCQPGFTGSLCEERCPPGTHGPSCIN----------RCRCQNGA-IC---------NPA 76 (133)
Q Consensus 21 ~C~C~~~g~C-~---~~~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~----------~~~C~~~~-~C---------~~~ 76 (133)
.|.|..++.+ . ...+.|.|.++|.|..|+ .|.++|++..+.. .|.|...+ .| ...
T Consensus 254 ~C~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce-~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~ 332 (375)
T 4aqt_A 254 RCKCNGHASECVKNEFDKLMCNCKHNTYGVDCE-KCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGH 332 (375)
T ss_dssp EECCTTSCSCEEECTTSCEEECCCTTEESTTSC-EECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSC
T ss_pred eecCCCCCcccCCCCCCCeeeeCcCCCcCCCcc-cCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCC
Confidence 3677766543 2 124578999999999998 8999998865421 12333222 22 223
Q ss_pred CCee-eCCCCcccCCCCCCCCCCccCCCCCCCC
Q psy11501 77 NGQC-LCAPGWMGSVCNVPCTPGMWGQGCTVPC 108 (133)
Q Consensus 77 ~~~C-~C~~g~~g~~c~~~c~~g~~g~~c~~~c 108 (133)
.++| .|.+++.|.+|+ .|.+||++....+.|
T Consensus 333 ~G~C~~C~~n~~G~~Ce-~C~~Gyyg~~~~~~C 364 (375)
T 4aqt_A 333 GGHCTNCRDNTDGAKCE-RCRENFFRLGNTEAC 364 (375)
T ss_dssp CEEECSCTTTEESTTSC-EECSSEECCTTCSSC
T ss_pred CCCCCCCCCCCcCCCCC-CCCcCcccCcCCCCC
Confidence 6789 599999999999 799999987654444
No 34
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.32 E-value=1.6e-07 Score=57.34 Aligned_cols=87 Identities=32% Similarity=0.803 Sum_probs=53.3
Q ss_pred EEecC---CCeeecCCCCccCCCCc-cCCCCCCCCCCCCCCCCCCCCeecCC-CCeeeCCCCcc---cCCCCCCCCCCcc
Q psy11501 29 ECHPA---TGECSCQPGFTGSLCEE-RCPPGTHGPSCINRCRCQNGAICNPA-NGQCLCAPGWM---GSVCNVPCTPGMW 100 (133)
Q Consensus 29 ~C~~~---~~~C~C~~g~~G~~C~~-~C~~g~~g~~C~~~~~C~~~~~C~~~-~~~C~C~~g~~---g~~c~~~c~~g~~ 100 (133)
+|.+. .++|.|++||+|..++. .|.. .|... +|. +.|.+. .++|.|++||. |..|+.+
T Consensus 15 ~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~-----~C~~~-~C~--~~C~~~~~y~C~C~~Gy~~~~g~~C~di------ 80 (118)
T 1dx5_I 15 QCQPLDQTSYLCVCAEGFAPIPHEPHRCQM-----FCNQT-ACP--ADCDPNTQASCECPEGYILDDGFICTDI------ 80 (118)
T ss_dssp EEEECSSSCEEEECCTTEEEETTEEEEEEE-----CCCSS-EEE--CEECTTSTTCEECCTTEEEETTTEEEEC------
T ss_pred CCCCCCCCCEEeECCCCccccCCCCCcccc-----ccCCC-CCC--CcccCCCCeEeECCCCccCCCCCccccc------
Confidence 78754 57999999999985421 1221 02111 232 456543 67899999998 5555320
Q ss_pred CCCCCCCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501 101 GQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ 132 (133)
Q Consensus 101 g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~ 132 (133)
..|...-+| +++|++..+ +|.|++||+|.
T Consensus 81 -deC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 81 -DECENGGFC--SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp -CHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred -cccCCCCCC--cCeEEeCCCCEEEECCCCCccC
Confidence 111111145 688988755 89999999874
No 35
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.23 E-value=8.5e-07 Score=46.71 Aligned_cols=42 Identities=24% Similarity=0.527 Sum_probs=30.6
Q ss_pred cCCCCccCCCCCCCCCCCCCCCCCCCCeec-----C--CCCeeeCCCCcccCCCCC
Q psy11501 45 GSLCEERCPPGTHGPSCINRCRCQNGAICN-----P--ANGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 45 G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~-----~--~~~~C~C~~g~~g~~c~~ 93 (133)
|..|+..+.+ |.+. +|.++++|. + ..++|.|++||+|.+|+.
T Consensus 1 G~~c~~~~~e------C~s~-pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~ 49 (55)
T 3u7u_G 1 GTSHLVKCAE------KEKT-FCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQN 49 (55)
T ss_dssp --CCEEECCS------TTTT-TSCTTCEEEEECCC--CCCEEEEECTTEESTTSCE
T ss_pred CCCCcccCCC------CcCC-CCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCc
Confidence 3455555555 6655 899999994 2 268999999999999985
No 36
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=98.15 E-value=1e-06 Score=64.09 Aligned_cols=59 Identities=41% Similarity=0.824 Sum_probs=46.4
Q ss_pred CCCccccccccCCCCC-----------CCCCCCCCCCCCE-Ee------------------cCCCeee-cCCCCccCCCC
Q psy11501 1 MGTHCEEVCGPGRFGQ-----------NCSQECQCRNGAE-CH------------------PATGECS-CQPGFTGSLCE 49 (133)
Q Consensus 1 ~g~~c~~~C~~g~~g~-----------~c~~~C~C~~~g~-C~------------------~~~~~C~-C~~g~~G~~C~ 49 (133)
+|..|+ +|.+||+|. .| ++|.|.+++. |. ..++.|. |..+++|.+|+
T Consensus 295 ~G~~CE-rC~pGy~g~p~~~at~~~~~~C-~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~CE 372 (403)
T 2y38_A 295 CGGSCD-RCCPGFNQQPWKPATTDSANEC-QSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINCE 372 (403)
T ss_dssp ESSSCC-EECTTCCSSCCCCCCSSCCCCC-CCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTSC
T ss_pred cCCCCC-CCCccccCCcccccccCCCccc-cccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCcCcCCCCC
Confidence 488999 899999986 34 4678876653 62 2467995 99999999998
Q ss_pred ccCCCCCCCCCCC
Q psy11501 50 ERCPPGTHGPSCI 62 (133)
Q Consensus 50 ~~C~~g~~g~~C~ 62 (133)
+|.+||+|....
T Consensus 373 -rC~~GYyg~p~~ 384 (403)
T 2y38_A 373 -RCLPGFFRAPDQ 384 (403)
T ss_dssp -EECTTCEECTTS
T ss_pred -cCCCCccCCCCC
Confidence 899999986554
No 37
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.14 E-value=1.3e-07 Score=60.67 Aligned_cols=103 Identities=23% Similarity=0.620 Sum_probs=60.5
Q ss_pred CCCCCCEEecC--CCeeecCCCCc----cCCCCccCCCCCCCCCCCCC-CCC--CCCCeecCC------CCeeeCCCCcc
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFT----GSLCEERCPPGTHGPSCINR-CRC--QNGAICNPA------NGQCLCAPGWM 87 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~----G~~C~~~C~~g~~g~~C~~~-~~C--~~~~~C~~~------~~~C~C~~g~~ 87 (133)
+|. +++|.+. +|+|.|++||+ |..|+ ...++ .|... .+| .+.+.|.+. .++|.|++||.
T Consensus 11 ~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~----~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~ 84 (162)
T 1uzk_A 11 TCI-SGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSG----NCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKA 84 (162)
T ss_dssp SSB-TSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCE----EEEEEC----------CEEEEEEEECHHHHHTTTCCE
T ss_pred CCC-CCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCC----cccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCC
Confidence 354 5789754 67999999998 77776 22210 02110 011 224455432 46889999998
Q ss_pred -cCCCCC-----------CCCC--CccCCC----CCCC--C-----CCCCCCeeccCCC--ceeCCCCCccC
Q psy11501 88 -GSVCNV-----------PCTP--GMWGQG----CTVP--C-----ECFNGASCHHVTG--ECQCEPGFKGQ 132 (133)
Q Consensus 88 -g~~c~~-----------~c~~--g~~g~~----c~~~--c-----~C~~~g~C~~~~g--~C~C~~g~~G~ 132 (133)
+..|+. .|++ ||.+.. |.+. | .|.+ ++|+++.+ +|.|++||+|.
T Consensus 85 ~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~ 155 (162)
T 1uzk_A 85 WGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLN 155 (162)
T ss_dssp ETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBC
T ss_pred cCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCC
Confidence 665551 2444 777642 3222 2 3654 69988755 89999999985
No 38
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.07 E-value=3e-06 Score=53.56 Aligned_cols=61 Identities=36% Similarity=0.848 Sum_probs=44.3
Q ss_pred CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCCC-CCCCCCCee-cCC--CCeeeCCCCcc----cCCCC
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCINR-CRCQNGAIC-NPA--NGQCLCAPGWM----GSVCN 92 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~-~~C~~~~~C-~~~--~~~C~C~~g~~----g~~c~ 92 (133)
+|.++++|.+. .+.|.|++||+|..|+.. .+ |... .+|.+ +| .+. .++|.|++||. |..|+
T Consensus 55 pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~-de------C~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~~dG~~C~ 125 (146)
T 1x7a_L 55 PCLNGGLCKDDINSYECWCQVGFEGKNCELD-AT------CNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLAPDQKSCK 125 (146)
T ss_dssp SSCTTCEEEECSSCEEEECCSSEESTTTCEE-CC------TTSGGGSCSS--BCCCCSSSCCCCBCCTTEEECTTSSSEE
T ss_pred CCCCCCEeECCCCCEEEecCCCCcCCcCCCC-cc------ccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeCCCCCcCC
Confidence 68888999864 679999999999999743 22 5432 23443 67 544 67899999998 66665
No 39
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.06 E-value=5.1e-06 Score=47.31 Aligned_cols=63 Identities=33% Similarity=0.820 Sum_probs=41.9
Q ss_pred CCCCCCCCCCCeecCC--CCeeeCCCCcc--cCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501 61 CINRCRCQNGAICNPA--NGQCLCAPGWM--GSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ 132 (133)
Q Consensus 61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~--g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~ 132 (133)
|....+|.+ +.|.+. .++|.|++||. |..|+.+ ..|...-+|.+ ++|.+..+ +|.|++||+|.
T Consensus 8 C~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~di-------deC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 8 CKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECVDT-------DECSVGNPCGN-GTCKNVIGGFECTCEEGFEPG 76 (82)
T ss_dssp SSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEEEC-------CGGGTCCTTSS-SCEEECSSSEEECCSSSSCCC
T ss_pred CCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccCCc-------ccccCCCCCCC-CEeECCCCCEEeECCCCeEeC
Confidence 443235765 688765 68999999997 7666421 12221124655 58988755 89999999985
No 40
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.05 E-value=3.2e-06 Score=64.83 Aligned_cols=85 Identities=28% Similarity=0.750 Sum_probs=59.6
Q ss_pred ccccccccCCCC--CCCCC--CC---C--CCCCC---EEecC--CCeee-cCCCCccCCCCc-----------cCCCCCC
Q psy11501 4 HCEEVCGPGRFG--QNCSQ--EC---Q--CRNGA---ECHPA--TGECS-CQPGFTGSLCEE-----------RCPPGTH 57 (133)
Q Consensus 4 ~c~~~C~~g~~g--~~c~~--~C---~--C~~~g---~C~~~--~~~C~-C~~g~~G~~C~~-----------~C~~g~~ 57 (133)
.|. .|++||+| ..|+. +| + |.+++ +|.+. .++|. |++||+|..|+. .|..
T Consensus 26 ~C~-~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d--- 101 (634)
T 1yo8_A 26 SCG-FCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP--- 101 (634)
T ss_dssp EEC-CCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHSCCCCEEE---
T ss_pred ECC-cCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCccccccccccccCCCcccc---
Confidence 443 69999998 67864 56 3 88877 89854 67998 999999988641 1211
Q ss_pred CCCCCC-CCCCCCCCeecCC------CCeeeCCCCccc--CCCC
Q psy11501 58 GPSCIN-RCRCQNGAICNPA------NGQCLCAPGWMG--SVCN 92 (133)
Q Consensus 58 g~~C~~-~~~C~~~~~C~~~------~~~C~C~~g~~g--~~c~ 92 (133)
-..|.. ..+|.+++.|.+. .++|.|++||.| ..|+
T Consensus 102 ideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce 145 (634)
T 1yo8_A 102 ENPCKDKTHNCHKHAECIYLGHFSDPMYKCECQTGYAGDGLICG 145 (634)
T ss_dssp CCTTTTTCCCCCTTEEEEECCTTCSSSEEEEECTTEEESSSSEE
T ss_pred cccccCCCcccccCccccccccccccceeeeccCCccccCcccc
Confidence 122543 2368778888653 579999999998 5664
No 41
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.05 E-value=6.2e-07 Score=66.59 Aligned_cols=54 Identities=37% Similarity=1.125 Sum_probs=21.5
Q ss_pred CCCCCCeecCCCCeeeCCCCcccCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCCceeCCCCCccC
Q psy11501 66 RCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQCEPGFKGQ 132 (133)
Q Consensus 66 ~C~~~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g~C~C~~g~~G~ 132 (133)
+|.+ +.|.. .++|.|.+||+|..|+. ..|.. +|.++|+|+.. ++|.|++||+|.
T Consensus 398 ~C~n-G~C~~-~~~C~C~~G~~G~~C~~--------~~C~~--~C~~~g~C~~~-~~C~C~~G~~G~ 451 (463)
T 2wg3_C 398 LCRN-GYCTP-TGKCCCSPGWEGDFCRT--------AKCEP--ACRHGGVCVRP-NKCLCKKGYLGP 451 (463)
T ss_dssp HCCS-EEECT-TSCEEECTTEESTTSCE--------ECC----------------------------
T ss_pred CCCC-CccCC-CCeECCCCCcCCCcCCc--------CcCCC--CCCCCCEECCC-CEEECCCCcccC
Confidence 3666 78974 46899999999999863 13433 78899999764 689999999986
No 42
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.03 E-value=4.1e-06 Score=50.63 Aligned_cols=57 Identities=32% Similarity=0.804 Sum_probs=39.4
Q ss_pred CCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCCCCCCCCCC---eeccCCC--ceeCCCCCcc
Q psy11501 67 CQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGA---SCHHVTG--ECQCEPGFKG 131 (133)
Q Consensus 67 C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g---~C~~~~g--~C~C~~g~~G 131 (133)
|.++++|.+. .++|.|++||.|..|+..-. .++|...+++ +|++..+ +|.|++||++
T Consensus 22 C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~--------~~~C~~~~~~C~~~C~n~~g~y~C~C~~G~~~ 85 (114)
T 1aut_L 22 CCGHGTCIDGIGSFSCDCRSGWEGRFCQREVS--------FLNCSLDNGGCTHYCLEEVGWRRCSCAPGYKL 85 (114)
T ss_dssp TTTSEEECCCSSCCCEEECTTEESTTSCEECC--------SSSSSSGGGGCSSEEEECSSSEEEECCTTEEE
T ss_pred CCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCc--------CCcCcCCCCCCCCEeECCCCCEEeECCCCeeE
Confidence 7788899765 67999999999998874210 0112111223 8887654 8999999986
No 43
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.01 E-value=7.7e-06 Score=49.41 Aligned_cols=63 Identities=24% Similarity=0.608 Sum_probs=42.4
Q ss_pred CCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCCC-CCCCCCCeecCC--CCeeeCCCCcccCCCC
Q psy11501 24 CRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCINR-CRCQNGAICNPA--NGQCLCAPGWMGSVCN 92 (133)
Q Consensus 24 C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~-~~C~~~~~C~~~--~~~C~C~~g~~g~~c~ 92 (133)
|.++++|.+. .++|.|++||+|..|+..... ..|... ..|.. +|.+. .++|.|++||.+....
T Consensus 22 C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~----~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~~~~g 89 (114)
T 1aut_L 22 CCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSF----LNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKLGDDL 89 (114)
T ss_dssp TTTSEEECCCSSCCCEEECTTEESTTSCEECCS----SSSSSGGGGCSS--EEEECSSSEEEECCTTEEECTTS
T ss_pred CCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcC----CcCcCCCCCCCC--EeECCCCCEEeECCCCeeECCCC
Confidence 7788999754 679999999999999843220 013221 12322 77654 6799999999965433
No 44
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=97.97 E-value=5.6e-06 Score=47.11 Aligned_cols=59 Identities=24% Similarity=0.669 Sum_probs=41.7
Q ss_pred CCCCCCEEecC--CCeeecCCCCc--cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccCC
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFT--GSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGSV 90 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~--G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~ 90 (133)
+|.+ ++|.+. .++|.|++||+ |..|+ ...+ |....+|.+ ++|.+. .++|.|++||.|..
T Consensus 13 ~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~-dide------C~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 13 VCKH-GQCINTDGSYRCECPFGYILAGNECV-DTDE------CSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp SCSS-SEECCCSSCCCEECCTTEEEETTEEE-ECCG------GGTCCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred CcCC-CEEEecCCCEEEECCCCeECCCCccC-Cccc------ccCCCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence 3544 788754 68999999997 88885 3333 543336765 488765 67999999998753
No 45
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.96 E-value=9.5e-06 Score=51.21 Aligned_cols=60 Identities=27% Similarity=0.832 Sum_probs=42.1
Q ss_pred CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCC-CCCCCCCCee-ccCCC--ceeCCCCCc
Q psy11501 61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTV-PCECFNGASC-HHVTG--ECQCEPGFK 130 (133)
Q Consensus 61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~-~c~C~~~g~C-~~~~g--~C~C~~g~~ 130 (133)
|... +|.++++|.+. .++|.|++||.|..|+.. ..|.. +..|.+ +| ++..+ +|.|++||+
T Consensus 51 C~~~-pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~-------deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~ 116 (146)
T 1x7a_L 51 CEPN-PCLNGGLCKDDINSYECWCQVGFEGKNCELD-------ATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYR 116 (146)
T ss_dssp CSSC-SSCTTCEEEECSSCEEEECCSSEESTTTCEE-------CCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEE
T ss_pred CCCC-CCCCCCEeECCCCCEEEecCCCCcCCcCCCC-------ccccCCCCCCcC--CCCCCCCCCEEeEcCCCcE
Confidence 5433 78888999765 679999999999988742 22322 123433 78 66543 899999998
No 46
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.95 E-value=4.5e-06 Score=43.89 Aligned_cols=31 Identities=35% Similarity=0.783 Sum_probs=25.1
Q ss_pred CCCCCCEEe-----c--CCCeeecCCCCccCCCCccCC
Q psy11501 23 QCRNGAECH-----P--ATGECSCQPGFTGSLCEERCP 53 (133)
Q Consensus 23 ~C~~~g~C~-----~--~~~~C~C~~g~~G~~C~~~C~ 53 (133)
+|.++|+|. + ..++|.|++||+|.+|+....
T Consensus 15 pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 15 FCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp TSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 799999994 2 267999999999999986433
No 47
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.90 E-value=1.3e-06 Score=53.26 Aligned_cols=73 Identities=27% Similarity=0.736 Sum_probs=48.2
Q ss_pred ccccCCCCCCCCC-CC--CCCCC---CEEecC-CCeeecCCCCc---cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC-
Q psy11501 8 VCGPGRFGQNCSQ-EC--QCRNG---AECHPA-TGECSCQPGFT---GSLCEERCPPGTHGPSCINRCRCQNGAICNPA- 76 (133)
Q Consensus 8 ~C~~g~~g~~c~~-~C--~C~~~---g~C~~~-~~~C~C~~g~~---G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~- 76 (133)
.|++||.|..... +| +|.++ +.|.+. .+.|.|++||+ |..|+ ...+ |....+| +++|.+.
T Consensus 27 ~C~~Gy~g~~~~~~~C~~~C~~~~C~~~C~~~~~y~C~C~~Gy~~~~g~~C~-dide------C~~~~~C--~~~C~n~~ 97 (118)
T 1dx5_I 27 VCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQASCECPEGYILDDGFICT-DIDE------CENGGFC--SGVCHNLP 97 (118)
T ss_dssp ECCTTEEEETTEEEEEEECCCSSEEECEECTTSTTCEECCTTEEEETTTEEE-ECCH------HHHCSSC--SSEEEECS
T ss_pred ECCCCccccCCCCCccccccCCCCCCCcccCCCCeEeECCCCccCCCCCccc-cccc------cCCCCCC--cCeEEeCC
Confidence 6999999875421 22 23332 566543 67999999999 77774 3232 4332356 4678755
Q ss_pred -CCeeeCCCCcccC
Q psy11501 77 -NGQCLCAPGWMGS 89 (133)
Q Consensus 77 -~~~C~C~~g~~g~ 89 (133)
.++|.|++||.+.
T Consensus 98 g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 98 GTFECICGPDSALA 111 (118)
T ss_dssp SSEEEEECSSSSCE
T ss_pred CCEEEECCCCCccC
Confidence 6899999999864
No 48
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.88 E-value=5.4e-06 Score=52.05 Aligned_cols=63 Identities=32% Similarity=0.805 Sum_probs=43.5
Q ss_pred CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCC---eecCC---CCeeeCCCCcc----cCC
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGA---ICNPA---NGQCLCAPGWM----GSV 90 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~---~C~~~---~~~C~C~~g~~----g~~ 90 (133)
+|.++++|.+. .+.|.|++||+|..|+..... +. .+++.+++ +|.+. .++|.|++||. |..
T Consensus 54 pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~------c~-~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~~dG~~ 126 (142)
T 2c4f_L 54 PCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDD------QL-ICVNENGGCEQYCSDHTGTKRSCRCHEGYSLLADGVS 126 (142)
T ss_dssp CCCTTCEEEEETTEEEEECCTTEESTTSCEEGGG------CC-STTTGGGGCSSEEECCTTSCCEEECCTTEEECTTSSC
T ss_pred CcCCCCEEeCCCCCEEeeCCCCccCCccccCccc------cc-cccCCCCCccCEeECCCCCCEEEECCCCceECCCCCC
Confidence 68888999864 579999999999999742111 11 11333333 67654 57899999999 666
Q ss_pred CC
Q psy11501 91 CN 92 (133)
Q Consensus 91 c~ 92 (133)
|+
T Consensus 127 C~ 128 (142)
T 2c4f_L 127 CT 128 (142)
T ss_dssp EE
T ss_pred CC
Confidence 65
No 49
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.86 E-value=4.7e-05 Score=53.58 Aligned_cols=60 Identities=32% Similarity=0.759 Sum_probs=45.3
Q ss_pred CCCCCCEEecC--CCeeecCCCCccCCCCccCCCCCCCCCCCC--CCCCCCCCeecCC--CCeeeCCCCcccCC
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFTGSLCEERCPPGTHGPSCIN--RCRCQNGAICNPA--NGQCLCAPGWMGSV 90 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C~~g~~g~~C~~--~~~C~~~~~C~~~--~~~C~C~~g~~g~~ 90 (133)
+|.++++|.+. .+.|.|++||+|..|+....+ |.. ..+|.+ .|.+. .++|.|++||.+..
T Consensus 12 pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~e------C~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~~ 77 (317)
T 3h5c_B 12 PCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNE------CHPERTDGCQH--FCLPGQESYTCSCAQGYRLGE 77 (317)
T ss_dssp CCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSS------CCTTCTTSCSS--EEECCSSSCEEECCTTEECCT
T ss_pred CCCCCCEeECCCCCeEEECCCCCcCCccccCccc------CCCCCCCCCcC--ccccCCCeeEEeccccccccc
Confidence 68888899754 679999999999999744333 554 136765 78765 78999999998753
No 50
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.80 E-value=6e-06 Score=49.44 Aligned_cols=74 Identities=26% Similarity=0.508 Sum_probs=27.5
Q ss_pred ccccCCCCCCCCC-CCCCCCC---CEEecC--CCeeecCCCCcc---CCCCccCCCCCCCCCCCCCCCCCCCCeecCC--
Q psy11501 8 VCGPGRFGQNCSQ-ECQCRNG---AECHPA--TGECSCQPGFTG---SLCEERCPPGTHGPSCINRCRCQNGAICNPA-- 76 (133)
Q Consensus 8 ~C~~g~~g~~c~~-~C~C~~~---g~C~~~--~~~C~C~~g~~G---~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~-- 76 (133)
....+|++..|.. +|.-.++ ..|.+. .+.|.|++||+| ..|+ ...+ |....+|. +.|.+.
T Consensus 17 ~~~~~~~~~~Cd~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dide------C~~~~~C~--~~C~n~~g 87 (107)
T 2w2n_E 17 TTENLYFQGAMGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCE-DIDE------CQDPDTCS--QLCVNLEG 87 (107)
T ss_dssp ---CCCCSCCBSCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEE-C---------------------------
T ss_pred ccCCCcCCCCCcCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccc-cccc------cCCCCCcC--CeeecCCC
Confidence 4567888888864 4521111 378754 689999999998 6665 3232 54323454 467655
Q ss_pred CCeeeCCCCcccCC
Q psy11501 77 NGQCLCAPGWMGSV 90 (133)
Q Consensus 77 ~~~C~C~~g~~g~~ 90 (133)
.++|.|++||.+..
T Consensus 88 sy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 88 GYKCQCEEGFQLDP 101 (107)
T ss_dssp --------------
T ss_pred CEEEECCCCceECC
Confidence 68899999998653
No 51
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.79 E-value=2e-06 Score=56.86 Aligned_cols=63 Identities=30% Similarity=0.757 Sum_probs=21.1
Q ss_pred CCCCCCEEecC--CCeeecCCCCccCCCCccC-CCCCCCCCCCCC-CCCCCCCeecCC--CCeeeCCCCcc----cCCCC
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFTGSLCEERC-PPGTHGPSCINR-CRCQNGAICNPA--NGQCLCAPGWM----GSVCN 92 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C-~~g~~g~~C~~~-~~C~~~~~C~~~--~~~C~C~~g~~----g~~c~ 92 (133)
+|.++++|.+. .|.|.|++||+|..|+... .+ |... .+|.+ .|.+. .+.|.|++||. |..|+
T Consensus 49 pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~de------C~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~dG~~C~ 120 (195)
T 1nfu_B 49 PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKL------CSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACI 120 (195)
T ss_dssp --------------------------------CCG------GGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred CCCCCCEeECCCCCeeEeCCCCceecccccccccc------ccCCCCCCCC--EeECCCCCeEEECCCCceeCCCCCccc
Confidence 68888999754 6799999999999997432 22 4321 24544 77654 67999999999 77776
Q ss_pred C
Q psy11501 93 V 93 (133)
Q Consensus 93 ~ 93 (133)
.
T Consensus 121 ~ 121 (195)
T 1nfu_B 121 P 121 (195)
T ss_dssp E
T ss_pred c
Confidence 4
No 52
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=97.75 E-value=9.6e-06 Score=58.64 Aligned_cols=60 Identities=28% Similarity=0.639 Sum_probs=42.5
Q ss_pred CCCccccccccCCCCCCCC----------CCCCCCCCC-EE---------ecCCCee-ecCCCCccCCCCccCCCCCCCC
Q psy11501 1 MGTHCEEVCGPGRFGQNCS----------QECQCRNGA-EC---------HPATGEC-SCQPGFTGSLCEERCPPGTHGP 59 (133)
Q Consensus 1 ~g~~c~~~C~~g~~g~~c~----------~~C~C~~~g-~C---------~~~~~~C-~C~~g~~G~~C~~~C~~g~~g~ 59 (133)
+|..|+ +|.+||++..+. ++|.|..++ .| ...+|+| .|.++|+|.+|+ .|.+||||.
T Consensus 281 ~G~~Ce-~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n~~G~~Ce-~C~~Gyyg~ 358 (375)
T 4aqt_A 281 YGVDCE-KCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCE-RCRENFFRL 358 (375)
T ss_dssp ESTTSC-EECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEEECSCTTTEESTTSC-EECSSEECC
T ss_pred cCCCcc-cCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCCCCCCCCCCcCCCCC-CCCcCcccC
Confidence 367787 888888876432 135565443 23 2346889 499999999998 899999987
Q ss_pred CCC
Q psy11501 60 SCI 62 (133)
Q Consensus 60 ~C~ 62 (133)
...
T Consensus 359 ~~~ 361 (375)
T 4aqt_A 359 GNT 361 (375)
T ss_dssp TTC
T ss_pred cCC
Confidence 543
No 53
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.75 E-value=1.1e-05 Score=50.62 Aligned_cols=58 Identities=33% Similarity=0.804 Sum_probs=41.3
Q ss_pred CCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCCCCCCCCCC---eeccCCC---ceeCCCCCc
Q psy11501 66 RCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGA---SCHHVTG---ECQCEPGFK 130 (133)
Q Consensus 66 ~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~~c~C~~~g---~C~~~~g---~C~C~~g~~ 130 (133)
+|.++++|.+. .++|.|++||.|..|+.... .+ ..+.+.+++ +|++..+ +|.|++||+
T Consensus 54 pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~------~c-~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~ 119 (142)
T 2c4f_L 54 PCQNGGSCKDQLQSYICFCLPAFEGRNCETHKD------DQ-LICVNENGGCEQYCSDHTGTKRSCRCHEGYS 119 (142)
T ss_dssp CCCTTCEEEEETTEEEEECCTTEESTTSCEEGG------GC-CSTTTGGGGCSSEEECCTTSCCEEECCTTEE
T ss_pred CcCCCCEEeCCCCCEEeeCCCCccCCccccCcc------cc-ccccCCCCCccCEeECCCCCCEEEECCCCce
Confidence 78888999765 67999999999998874100 11 113444555 8877543 899999998
No 54
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.73 E-value=2.8e-06 Score=52.88 Aligned_cols=62 Identities=31% Similarity=0.778 Sum_probs=19.7
Q ss_pred CCCCCCEEecC--CCeeecCCCCccCCCCccC-CCCCCCCCCCCC-CCCCCCCeecCC--CCeeeCCCCcc----cCCCC
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFTGSLCEERC-PPGTHGPSCINR-CRCQNGAICNPA--NGQCLCAPGWM----GSVCN 92 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~~C-~~g~~g~~C~~~-~~C~~~~~C~~~--~~~C~C~~g~~----g~~c~ 92 (133)
+|.++++|.+. .+.|.|++||+|..|+... .+ |... .+|.+ +|.+. .++|.|++||. |..|+
T Consensus 49 pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~------C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~~g~~C~ 120 (134)
T 2vh0_B 49 PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKL------CSLDNGDCDQ--FCHEEQNSVVCSCARGYTLADNGKACI 120 (134)
T ss_dssp --------------------------------CCG------GGTGGGGCSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred CCCCcCCcccCCCCEEeeCCCCccCCccccCCCCc------cccCCCCCCC--EeECCCCCEEEECCCCcEECCCCCccC
Confidence 68888899754 6799999999999997422 22 3321 23543 67644 57899999999 76665
No 55
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.68 E-value=0.0001 Score=51.82 Aligned_cols=64 Identities=27% Similarity=0.745 Sum_probs=44.1
Q ss_pred CCCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCC--CCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501 60 SCINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTV--PCECFNGASCHHVTG--ECQCEPGFKGQ 132 (133)
Q Consensus 60 ~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~--~c~C~~~g~C~~~~g--~C~C~~g~~G~ 132 (133)
.|... +|.++++|.+. .++|.|++||.|..|+..- ..|.. .-+|.+ +|.+..+ +|.|++||.+.
T Consensus 7 ~C~~~-pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~------~eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 7 PCISQ-PCLHNGSCQDSIWGYTCTCSPGYEGSNCELAK------NECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp CTTSC-CCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCS------SSCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred cCCCC-CCCCCCEeECCCCCeEEECCCCCcCCccccCc------ccCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 35443 78888889765 6799999999999887310 12321 124554 7877644 89999999874
No 56
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.62 E-value=2.1e-05 Score=49.52 Aligned_cols=38 Identities=34% Similarity=0.794 Sum_probs=25.7
Q ss_pred CCCCCcc---CCCCCCC--C-----CCCCCCeeccCCC--ceeCCCCCccC
Q psy11501 94 PCTPGMW---GQGCTVP--C-----ECFNGASCHHVTG--ECQCEPGFKGQ 132 (133)
Q Consensus 94 ~c~~g~~---g~~c~~~--c-----~C~~~g~C~~~~g--~C~C~~g~~G~ 132 (133)
.|++||. |..|++. | .|.+ ++|++..+ +|.|++||+|.
T Consensus 91 ~C~~Gy~~~~g~~C~dideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~ 140 (147)
T 2w86_A 91 ICGKGYSRIKGTQCEDIDECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLD 140 (147)
T ss_dssp TTCTTEEEEETTEEEECCHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBC
T ss_pred cCCCccccCCCCccCccccccCCCCCCCC-CEEECCCCCEEeeCCCCCccC
Confidence 4566663 5555432 2 3665 49988765 89999999985
No 57
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.52 E-value=1.6e-05 Score=52.55 Aligned_cols=62 Identities=27% Similarity=0.754 Sum_probs=16.6
Q ss_pred CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCC-CCCCCCCCeeccCCC--ceeCCCCCc
Q psy11501 61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTV-PCECFNGASCHHVTG--ECQCEPGFK 130 (133)
Q Consensus 61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~-~c~C~~~g~C~~~~g--~C~C~~g~~ 130 (133)
|... +|.++++|.+. .+.|.|++||.|..|+.... ..|.. +..|.+ +|.+..+ +|.|++||+
T Consensus 45 C~~~-pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~-----deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 45 CETS-PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTR-----KLCSLDNGDCDQ--FCHEEQNSVVCSCARGYT 111 (195)
T ss_dssp -------------------------------------C-----CGGGTGGGGCSS--EEEEETTEEEEECCTTEE
T ss_pred cCCC-CCCCCCEeECCCCCeeEeCCCCceecccccccc-----ccccCCCCCCCC--EeECCCCCeEEECCCCce
Confidence 4433 78888899765 67999999999998874110 11221 123543 8877654 899999998
No 58
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.47 E-value=2.1e-05 Score=48.91 Aligned_cols=58 Identities=28% Similarity=0.753 Sum_probs=16.3
Q ss_pred CCCCCCeecCC--CCeeeCCCCcccCCCCCCCCCCccCCCCCC-CCCCCCCCeeccCCC--ceeCCCCCc
Q psy11501 66 RCQNGAICNPA--NGQCLCAPGWMGSVCNVPCTPGMWGQGCTV-PCECFNGASCHHVTG--ECQCEPGFK 130 (133)
Q Consensus 66 ~C~~~~~C~~~--~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~-~c~C~~~g~C~~~~g--~C~C~~g~~ 130 (133)
+|.++++|.+. .++|.|++||.|..|+.... ..|.. +..|.+ +|++..+ +|.|++||+
T Consensus 49 pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~-----d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 49 PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTR-----KLCSLDNGDCDQ--FCHEEQNSVVCSCARGYT 111 (134)
T ss_dssp --------------------------------C-----CGGGTGGGGCSS--EEEEETTEEEEECCTTEE
T ss_pred CCCCcCCcccCCCCEEeeCCCCccCCccccCCC-----CccccCCCCCCC--EeECCCCCEEEECCCCcE
Confidence 68888889765 67999999999988874110 11211 113443 7877654 899999998
No 59
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=97.47 E-value=3.9e-05 Score=56.19 Aligned_cols=27 Identities=37% Similarity=1.046 Sum_probs=0.0
Q ss_pred CCCCCCeecCCCCeeeCCCCcccCCCCC
Q psy11501 66 RCQNGAICNPANGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 66 ~C~~~~~C~~~~~~C~C~~g~~g~~c~~ 93 (133)
+|.++++|.+.. +|.|++||.|..|+.
T Consensus 372 ~C~ngg~C~~~~-~C~C~~G~~G~~Ce~ 398 (426)
T 3zyj_B 372 HCQNGGTCHNNV-RCLCPAAYTGILCEK 398 (426)
T ss_dssp ----------------------------
T ss_pred cCCCCCCcCCCC-CCcCCCCCcCCCCcC
Confidence 677888887655 889999999988873
No 60
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.46 E-value=4.1e-05 Score=45.73 Aligned_cols=52 Identities=35% Similarity=0.837 Sum_probs=16.4
Q ss_pred eecCC--CCeeeCCCCccc---CCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501 72 ICNPA--NGQCLCAPGWMG---SVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ 132 (133)
Q Consensus 72 ~C~~~--~~~C~C~~g~~g---~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~ 132 (133)
.|.+. .++|.|++||.| ..|+.+ ..|..+-+|. ++|++..+ +|.|++||++.
T Consensus 42 ~C~n~~g~y~C~C~~Gy~g~~g~~C~di-------deC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 42 VCNDLKIGYECLCPDGFQLVAQRRCEDI-------DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp EEECCSBSCEEECCTTCEEETTTEEEC-----------------------------------------
T ss_pred EeEeCCCCeEEECCCCccccCCCccccc-------cccCCCCCcC--CeeecCCCCEEEECCCCceEC
Confidence 67654 689999999998 445421 1222111343 67877644 89999999874
No 61
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.45 E-value=8.7e-05 Score=35.91 Aligned_cols=31 Identities=32% Similarity=0.880 Sum_probs=24.8
Q ss_pred CCCCCCCCCCCeecCC--CCeeeCCCCcccCCCC
Q psy11501 61 CINRCRCQNGAICNPA--NGQCLCAPGWMGSVCN 92 (133)
Q Consensus 61 C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~ 92 (133)
|... +|.++++|.+. .++|.|++||.|.+|+
T Consensus 6 C~~~-pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 6 CESN-PCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp TTTC-CCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred CCCC-CCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 4433 78999999754 5789999999999886
No 62
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.41 E-value=7.8e-05 Score=36.07 Aligned_cols=27 Identities=44% Similarity=0.992 Sum_probs=23.2
Q ss_pred CCCCCCEEecC--CCeeecCCCCccCCCC
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFTGSLCE 49 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~ 49 (133)
+|.++++|.+. .+.|.|++||+|..|+
T Consensus 10 pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 10 PCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred CCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 68888999754 5789999999999986
No 63
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=97.39 E-value=0.00013 Score=39.28 Aligned_cols=32 Identities=50% Similarity=1.041 Sum_probs=26.2
Q ss_pred CCCCCCEEec-------CCCeeecCCCCccCCCCccCCC
Q psy11501 23 QCRNGAECHP-------ATGECSCQPGFTGSLCEERCPP 54 (133)
Q Consensus 23 ~C~~~g~C~~-------~~~~C~C~~g~~G~~C~~~C~~ 54 (133)
+|.++|+|.+ ..+.|.|++||+|..|+....+
T Consensus 13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~ 51 (63)
T 1hae_A 13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPM 51 (63)
T ss_dssp TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCS
T ss_pred cCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCc
Confidence 6889999974 3678999999999999865444
No 64
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.31 E-value=7.7e-05 Score=42.64 Aligned_cols=58 Identities=29% Similarity=0.767 Sum_probs=37.1
Q ss_pred CCCCCCeecCC--CCeeeCCCCccc-----CCCCCCCCCCccCCCCC-CCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501 66 RCQNGAICNPA--NGQCLCAPGWMG-----SVCNVPCTPGMWGQGCT-VPCECFNGASCHHVTG--ECQCEPGFKGQ 132 (133)
Q Consensus 66 ~C~~~~~C~~~--~~~C~C~~g~~g-----~~c~~~c~~g~~g~~c~-~~c~C~~~g~C~~~~g--~C~C~~g~~G~ 132 (133)
+|.+ ++|.+. .++|.|++||.+ ..|+.+ ..|. .+..|. +++|.+..+ +|.|++||++.
T Consensus 12 ~C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~di-------deC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 12 LCGR-GQCVNTPGDFECKCDEGYESGFMMMKNCMDI-------DECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp TTTT-SCEEEETTEEEECCCSSEEECTTTSSSEEEC-------CHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCC
T ss_pred CCCC-CEEECCCCCEEeeCCCCcCccCCCCCccCCc-------ccccCCCCcCC-CCEeEcCCCCEEEECcCCcccC
Confidence 3654 478654 679999999984 334310 1111 122354 479988765 89999999975
No 65
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.26 E-value=0.00019 Score=35.92 Aligned_cols=28 Identities=29% Similarity=0.746 Sum_probs=23.5
Q ss_pred CCCCCCEEe--c--CCCeeecCCCCccCCCCc
Q psy11501 23 QCRNGAECH--P--ATGECSCQPGFTGSLCEE 50 (133)
Q Consensus 23 ~C~~~g~C~--~--~~~~C~C~~g~~G~~C~~ 50 (133)
+|.++++|. + ..+.|.|++||+|..|+.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 688899997 3 267899999999999974
No 66
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.21 E-value=0.00052 Score=35.52 Aligned_cols=28 Identities=32% Similarity=0.902 Sum_probs=23.9
Q ss_pred CCCCCCEEe--cC--CCeeecCCCCccCCCCc
Q psy11501 23 QCRNGAECH--PA--TGECSCQPGFTGSLCEE 50 (133)
Q Consensus 23 ~C~~~g~C~--~~--~~~C~C~~g~~G~~C~~ 50 (133)
+|.++|+|. +. .+.|.|++||+|..|+.
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence 688899997 43 67899999999999984
No 67
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.13 E-value=0.00016 Score=37.54 Aligned_cols=30 Identities=30% Similarity=0.711 Sum_probs=24.5
Q ss_pred CCCCCCEEe--cC--CCeeecCCCCccCCCCccC
Q psy11501 23 QCRNGAECH--PA--TGECSCQPGFTGSLCEERC 52 (133)
Q Consensus 23 ~C~~~g~C~--~~--~~~C~C~~g~~G~~C~~~C 52 (133)
+|.++|+|. +. .+.|.|++||+|.+|+..-
T Consensus 13 pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~ 46 (53)
T 1nql_B 13 YCLHDGVCMYIEALDKYACNCVVGYIGERCQYRD 46 (53)
T ss_dssp EECTTCEEEEETTTTEEEEEECTTEESTTSCEEC
T ss_pred CCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCC
Confidence 588899997 33 5789999999999998543
No 68
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.13 E-value=0.00035 Score=34.88 Aligned_cols=28 Identities=29% Similarity=0.730 Sum_probs=23.5
Q ss_pred CCCCCCeec--CC--CCeeeCCCCcccCCCCC
Q psy11501 66 RCQNGAICN--PA--NGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 66 ~C~~~~~C~--~~--~~~C~C~~g~~g~~c~~ 93 (133)
+|.++++|. +. .++|.|++||+|.+|+.
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 41 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQT 41 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCc
Confidence 788999996 32 67999999999999874
No 69
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.11 E-value=0.0012 Score=34.18 Aligned_cols=28 Identities=32% Similarity=0.869 Sum_probs=24.1
Q ss_pred CCCCCCeec--CC--CCeeeCCCCcccCCCCC
Q psy11501 66 RCQNGAICN--PA--NGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 66 ~C~~~~~C~--~~--~~~C~C~~g~~g~~c~~ 93 (133)
+|.++++|. +. .+.|.|++||+|.+|+.
T Consensus 13 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~ 44 (53)
T 1egf_A 13 YCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44 (53)
T ss_dssp SSCSSCEEEEESSSSCEEEECCTTCCSSSSCC
T ss_pred cCCCCcEEEeeCCCCCEEEECCCCCcCCcCCc
Confidence 789999997 43 67999999999999975
No 70
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.01 E-value=0.00012 Score=45.91 Aligned_cols=22 Identities=27% Similarity=0.750 Sum_probs=12.0
Q ss_pred CCCCCeecCC--CCeeeCCCCcccC
Q psy11501 67 CQNGAICNPA--NGQCLCAPGWMGS 89 (133)
Q Consensus 67 C~~~~~C~~~--~~~C~C~~g~~g~ 89 (133)
|.+ ++|.+. .++|.|++||.+.
T Consensus 117 C~~-g~C~n~~g~y~C~C~~Gy~g~ 140 (147)
T 2w86_A 117 CKN-GLCVNTRGSFKCQCPSGMTLD 140 (147)
T ss_dssp SSS-SEEEEETTEEEEECCTTCCBC
T ss_pred CCC-CEEECCCCCEEeeCCCCCccC
Confidence 443 355443 4566666666654
No 71
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=97.00 E-value=0.00098 Score=40.64 Aligned_cols=30 Identities=37% Similarity=0.874 Sum_probs=24.7
Q ss_pred CCCCCCCEEecC----CC-eeecCCCCccCCCCcc
Q psy11501 22 CQCRNGAECHPA----TG-ECSCQPGFTGSLCEER 51 (133)
Q Consensus 22 C~C~~~g~C~~~----~~-~C~C~~g~~G~~C~~~ 51 (133)
|+|.++|+|.+. .+ .|.|+++|+|.+|++.
T Consensus 1 ~pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~ 35 (122)
T 2fd6_A 1 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID 35 (122)
T ss_dssp CCCCSSCEEEECTTTTTCEEEECCTTEESTTSCEE
T ss_pred CCCCCcCCcCCCcccCCCCCccCCCCCCCcccccc
Confidence 478999999754 34 8999999999999853
No 72
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.99 E-value=0.00017 Score=41.33 Aligned_cols=57 Identities=28% Similarity=0.663 Sum_probs=37.5
Q ss_pred CCCCCEEecC--CCeeecCCCCc----cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccCCCC
Q psy11501 24 CRNGAECHPA--TGECSCQPGFT----GSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGSVCN 92 (133)
Q Consensus 24 C~~~g~C~~~--~~~C~C~~g~~----G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~c~ 92 (133)
| ++++|.+. .++|.|++||+ |..|+ ...+ |.. .+|. ++|.+. .++|.|+ ++.|..++
T Consensus 13 C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-dide------C~~-~~C~--~~C~n~~g~y~C~C~-g~~G~~~~ 77 (87)
T 1z6c_A 13 C-GTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDE------CSE-NMCA--QLCVNYPGGYTCYCD-GKKGFKLA 77 (87)
T ss_dssp B-TTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CCCH------HHH-SCCS--SEECCCSSSCCEECC-SSSCCBCC
T ss_pred C-CCCEeECCCCCEEEECCCCceECCCCCcCC-CcCe------eCC-CCCC--CEEEccCCCEEEECC-CCcCCccc
Confidence 5 55778643 68999999998 66664 2222 432 2565 578765 6899997 66665554
No 73
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.97 E-value=0.00028 Score=36.46 Aligned_cols=37 Identities=32% Similarity=0.633 Sum_probs=29.0
Q ss_pred ccccCCCCCCCCCCCCCCCCCEEec----C--CCeeecCCCCccCCCCc
Q psy11501 8 VCGPGRFGQNCSQECQCRNGAECHP----A--TGECSCQPGFTGSLCEE 50 (133)
Q Consensus 8 ~C~~g~~g~~c~~~C~C~~~g~C~~----~--~~~C~C~~g~~G~~C~~ 50 (133)
.|+++|. .-+|.++|+|.. . .+.|.|++||+|.+|+.
T Consensus 6 ~C~~g~~------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 6 KCPETFD------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp CCCHHHH------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred ECCCCCc------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 5888876 125788899984 2 46899999999999984
No 74
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.93 E-value=0.00035 Score=36.29 Aligned_cols=30 Identities=27% Similarity=0.726 Sum_probs=24.6
Q ss_pred CCCCCCCeec--CC--CCeeeCCCCcccCCCCCC
Q psy11501 65 CRCQNGAICN--PA--NGQCLCAPGWMGSVCNVP 94 (133)
Q Consensus 65 ~~C~~~~~C~--~~--~~~C~C~~g~~g~~c~~~ 94 (133)
.+|.++++|. +. .+.|.|++||+|.+|+..
T Consensus 12 ~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 12 GYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 3789999996 33 579999999999999853
No 75
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.92 E-value=0.00039 Score=34.97 Aligned_cols=27 Identities=33% Similarity=0.886 Sum_probs=22.1
Q ss_pred CCCCCCEEec----CCCeeecCCCCccCCCCc
Q psy11501 23 QCRNGAECHP----ATGECSCQPGFTGSLCEE 50 (133)
Q Consensus 23 ~C~~~g~C~~----~~~~C~C~~g~~G~~C~~ 50 (133)
+|.+ |+|.+ ..+.|.|++||+|.+|+.
T Consensus 13 pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 13 YCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp SCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred CCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 5777 79974 257899999999999974
No 76
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.86 E-value=0.0006 Score=36.05 Aligned_cols=30 Identities=37% Similarity=0.790 Sum_probs=24.1
Q ss_pred CCCCCCEEe--c--C--CCeeecCCCCccCCCCccC
Q psy11501 23 QCRNGAECH--P--A--TGECSCQPGFTGSLCEERC 52 (133)
Q Consensus 23 ~C~~~g~C~--~--~--~~~C~C~~g~~G~~C~~~C 52 (133)
+|.++|+|. + . .+.|.|++||+|.+|+...
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~ 50 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE 50 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEEC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccC
Confidence 588999997 2 2 4689999999999998543
No 77
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.85 E-value=0.00057 Score=39.03 Aligned_cols=53 Identities=30% Similarity=0.837 Sum_probs=31.6
Q ss_pred CCCCCeecCC--CCeeeCCCCcc----cCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCC--CCCc
Q psy11501 67 CQNGAICNPA--NGQCLCAPGWM----GSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCE--PGFK 130 (133)
Q Consensus 67 C~~~~~C~~~--~~~C~C~~g~~----g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~--~g~~ 130 (133)
| ++++|.+. .++|.|++||. |..|+.+ ..|. .-+|. ++|.+..+ +|.|+ +||.
T Consensus 13 C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~di-------deC~-~~~C~--~~C~n~~g~y~C~C~g~~G~~ 75 (87)
T 1z6c_A 13 C-GTAVCKNIPGDFECECPEGYRYNLKSKSCEDI-------DECS-ENMCA--QLCVNYPGGYTCYCDGKKGFK 75 (87)
T ss_dssp B-TTSSCCCBTTBCCCSSSTTCEEETTTTEEECC-------CHHH-HSCCS--SEECCCSSSCCEECCSSSCCB
T ss_pred C-CCCEeECCCCCEEEECCCCceECCCCCcCCCc-------CeeC-CCCCC--CEEEccCCCEEEECCCCcCCc
Confidence 5 45677654 67899999998 4444320 1111 01454 68887654 89996 4443
No 78
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=96.82 E-value=7.3e-05 Score=47.72 Aligned_cols=83 Identities=25% Similarity=0.528 Sum_probs=49.9
Q ss_pred ccccCCC----CCCCCC--C--CC-----C--CCCCEEecC------CCeeecCCCCc-cCCCCc-----------cCCC
Q psy11501 8 VCGPGRF----GQNCSQ--E--CQ-----C--RNGAECHPA------TGECSCQPGFT-GSLCEE-----------RCPP 54 (133)
Q Consensus 8 ~C~~g~~----g~~c~~--~--C~-----C--~~~g~C~~~------~~~C~C~~g~~-G~~C~~-----------~C~~ 54 (133)
.|++||. |..|++ + |. | .+++.|.+. .+.|.|++||. |..|+. .|+.
T Consensus 27 ~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~ 106 (162)
T 1uzk_A 27 DCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPG 106 (162)
T ss_dssp ECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTT
T ss_pred eCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCcccCCCCCCCCceeECCC
Confidence 6999998 667753 1 41 2 235677643 46899999998 767651 1333
Q ss_pred --CCCCC----CCCCC-------CCCCCCCeecCC--CCeeeCCCCcccCCC
Q psy11501 55 --GTHGP----SCINR-------CRCQNGAICNPA--NGQCLCAPGWMGSVC 91 (133)
Q Consensus 55 --g~~g~----~C~~~-------~~C~~~~~C~~~--~~~C~C~~g~~g~~c 91 (133)
||.+. .|.+. .+|.+ ++|.+. .++|.|++||.|..-
T Consensus 107 g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~d 157 (162)
T 1uzk_A 107 GEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNED 157 (162)
T ss_dssp CTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCTT
T ss_pred CCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCCC
Confidence 66653 22222 13654 588765 789999999988643
No 79
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=96.80 E-value=0.00017 Score=41.20 Aligned_cols=58 Identities=28% Similarity=0.718 Sum_probs=38.0
Q ss_pred CCCCCEEecC--CCeeecCCCCc-----cCCCCccCCCCCCCCCCCCC-CCCCCCCeecCC--CCeeeCCCCcccCC
Q psy11501 24 CRNGAECHPA--TGECSCQPGFT-----GSLCEERCPPGTHGPSCINR-CRCQNGAICNPA--NGQCLCAPGWMGSV 90 (133)
Q Consensus 24 C~~~g~C~~~--~~~C~C~~g~~-----G~~C~~~C~~g~~g~~C~~~-~~C~~~~~C~~~--~~~C~C~~g~~g~~ 90 (133)
|.+ ++|.+. .++|.|++||+ |..|+ ...+ |... ..|. +++|.+. .++|.|++||.+..
T Consensus 13 C~~-g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dide------C~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 13 CGR-GQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDE------CQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp TTT-SCEEEETTEEEECCCSSEEECTTTSSSEE-ECCH------HHHCSSTTT-TSEEEEETTEEEEESCTTSCCCS
T ss_pred CCC-CEEECCCCCEEeeCCCCcCccCCCCCccC-Cccc------ccCCCCcCC-CCEeEcCCCCEEEECcCCcccCC
Confidence 544 588754 67999999998 55664 2222 3322 1354 3688755 67999999998753
No 80
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.77 E-value=0.0008 Score=36.06 Aligned_cols=28 Identities=36% Similarity=0.839 Sum_probs=24.0
Q ss_pred CCCCCCeecC-------CCCeeeCCCCcccCCCCC
Q psy11501 66 RCQNGAICNP-------ANGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 66 ~C~~~~~C~~-------~~~~C~C~~g~~g~~c~~ 93 (133)
+|.++++|.+ ..++|.|++||+|.+|+.
T Consensus 13 pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 47 (63)
T 1hae_A 13 FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTE 47 (63)
T ss_dssp TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCE
T ss_pred cCCCCcEEecCCccCCCCCEEEECCCCCcCCccCc
Confidence 7899999974 267999999999999975
No 81
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.65 E-value=0.00063 Score=35.07 Aligned_cols=28 Identities=39% Similarity=0.776 Sum_probs=23.3
Q ss_pred CCCCCCeecC----C--CCeeeCCCCcccCCCCC
Q psy11501 66 RCQNGAICNP----A--NGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 66 ~C~~~~~C~~----~--~~~C~C~~g~~g~~c~~ 93 (133)
+|.++++|.. . .++|.|++||+|.+|+.
T Consensus 15 pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp TSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred cCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 6888999974 2 56899999999999874
No 82
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=96.61 E-value=0.00087 Score=35.42 Aligned_cols=30 Identities=37% Similarity=0.675 Sum_probs=24.2
Q ss_pred CCCCCCeec--C--C--CCeeeCCCCcccCCCCCCC
Q psy11501 66 RCQNGAICN--P--A--NGQCLCAPGWMGSVCNVPC 95 (133)
Q Consensus 66 ~C~~~~~C~--~--~--~~~C~C~~g~~g~~c~~~c 95 (133)
+|.++|+|. . . .+.|.|++||.|.+|+...
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~ 50 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE 50 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEEC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccC
Confidence 688999996 2 2 4689999999999998643
No 83
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.53 E-value=0.0013 Score=33.01 Aligned_cols=28 Identities=25% Similarity=0.656 Sum_probs=22.7
Q ss_pred CCCCCCCeecC----CCCeeeCCCCcccCCCCC
Q psy11501 65 CRCQNGAICNP----ANGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 65 ~~C~~~~~C~~----~~~~C~C~~g~~g~~c~~ 93 (133)
.+|.+ |+|.. ..+.|.|++||+|.+|+.
T Consensus 12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred CCCCC-CEeeccCCCCCEEEECCCCCccCCCCc
Confidence 37888 79963 257899999999999974
No 84
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.51 E-value=0.0039 Score=45.17 Aligned_cols=54 Identities=26% Similarity=0.627 Sum_probs=37.9
Q ss_pred CEEecC--CCeeecCCCCc---cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccCC
Q psy11501 28 AECHPA--TGECSCQPGFT---GSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGSV 90 (133)
Q Consensus 28 g~C~~~--~~~C~C~~g~~---G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~~ 90 (133)
..|.+. .+.|.|++||. |..|+ ...+ |....+|.. .|.+. .++|.|.+||.+..
T Consensus 12 ~~C~~~~~~y~C~C~~G~~~~~~~~C~-dide------C~~~~~C~~--~C~n~~g~~~C~C~~g~~~~~ 72 (400)
T 3p5b_L 12 HVCNDLKIGYECLCPDGFQLVAQRRCE-DIDE------CQDPDTCSQ--LCVNLEGGYKCQCEEGFQLDP 72 (400)
T ss_dssp SEEEECSSSEEEECCTTEEECSSSCEE-ECCC------CSTTSSCSS--CCBCCSSSCBCCCCTTCCCCT
T ss_pred CEeECCCCCeEEECCCCCCcCCCCccc-Cchh------hhccCCCCC--ccCCCccceeeeccccccccc
Confidence 578754 67999999998 77775 3333 543335543 67655 78999999998653
No 85
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.50 E-value=0.0024 Score=46.25 Aligned_cols=54 Identities=33% Similarity=0.831 Sum_probs=34.5
Q ss_pred CCeecCC--CCeeeCCCCcc---cCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501 70 GAICNPA--NGQCLCAPGWM---GSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ 132 (133)
Q Consensus 70 ~~~C~~~--~~~C~C~~g~~---g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~ 132 (133)
...|.+. .+.|.|++||. |..|+.. ..|..+..|.+ +|.+..+ +|.|++||.+.
T Consensus 11 ~~~C~~~~~~y~C~C~~G~~~~~~~~C~di-------deC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~ 71 (400)
T 3p5b_L 11 SHVCNDLKIGYECLCPDGFQLVAQRRCEDI-------DECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLD 71 (400)
T ss_dssp SSEEEECSSSEEEECCTTEEECSSSCEEEC-------CCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCC
T ss_pred CCEeECCCCCeEEECCCCCCcCCCCcccCc-------hhhhccCCCCC--ccCCCccceeeecccccccc
Confidence 3577654 67999999998 5555421 12322223432 6777644 89999999864
No 86
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.47 E-value=0.00094 Score=35.66 Aligned_cols=27 Identities=19% Similarity=0.500 Sum_probs=23.2
Q ss_pred CCCCC--CEEecC--CCeeecCCCCc-cCCCC
Q psy11501 23 QCRNG--AECHPA--TGECSCQPGFT-GSLCE 49 (133)
Q Consensus 23 ~C~~~--g~C~~~--~~~C~C~~g~~-G~~C~ 49 (133)
+|.++ ++|.+. .|.|.|++||+ |.+|+
T Consensus 18 PC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 18 PCGPEAAGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp SSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred CCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence 68887 899864 57899999999 99986
No 87
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=96.19 E-value=0.0039 Score=40.61 Aligned_cols=27 Identities=44% Similarity=1.061 Sum_probs=24.1
Q ss_pred CCCCCCEEecCCCeeecCCCCccCCCCc
Q psy11501 23 QCRNGAECHPATGECSCQPGFTGSLCEE 50 (133)
Q Consensus 23 ~C~~~g~C~~~~~~C~C~~g~~G~~C~~ 50 (133)
.|.++|.|. ...+|.|++||+|..|+.
T Consensus 154 ~C~ngG~Cv-~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 154 GCRNGGFCN-ERRICECPDGFHGPHCEG 180 (188)
T ss_dssp CCCTTCEEC-TTSCEECCTTCBTTTTCB
T ss_pred CCCCCCEeC-CCCcccCcCCCCCCCCcC
Confidence 699999997 478999999999999983
No 88
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=96.10 E-value=0.001 Score=51.65 Aligned_cols=41 Identities=24% Similarity=0.575 Sum_probs=36.0
Q ss_pred ccccCCCCCCCC--CCC--CCCCCCEEecCCCeeecCCCCccCCCCc
Q psy11501 8 VCGPGRFGQNCS--QEC--QCRNGAECHPATGECSCQPGFTGSLCEE 50 (133)
Q Consensus 8 ~C~~g~~g~~c~--~~C--~C~~~g~C~~~~~~C~C~~g~~G~~C~~ 50 (133)
.|.++|.|++|. ..| .|+.+|.|. .++|+|.+||+|..|+.
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~~C~ghG~C~--~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLDMCSGHGRCV--QGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp CTTCCEEEEEEEEESCSSGGGGGSEEEE--TTEEEECTTEESTTSCE
T ss_pred ccCCCcccccccccCCCCcccCCCcEEC--CCCEeeCCCccCCCcCc
Confidence 689999999998 357 499999998 67999999999999974
No 89
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.10 E-value=0.0018 Score=34.51 Aligned_cols=28 Identities=18% Similarity=0.413 Sum_probs=23.5
Q ss_pred CCCCC--CeecCC--CCeeeCCCCcc-cCCCCC
Q psy11501 66 RCQNG--AICNPA--NGQCLCAPGWM-GSVCNV 93 (133)
Q Consensus 66 ~C~~~--~~C~~~--~~~C~C~~g~~-g~~c~~ 93 (133)
||.++ ++|.+. .+.|.|++||. |.+|+.
T Consensus 18 PC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 18 PCGPEAAGTCKETNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp SSCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred CCcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence 78888 899765 57999999999 988863
No 90
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.97 E-value=0.058 Score=41.93 Aligned_cols=52 Identities=35% Similarity=0.859 Sum_probs=29.9
Q ss_pred eecCC--CCeeeCCCCcc---cCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCccC
Q psy11501 72 ICNPA--NGQCLCAPGWM---GSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ 132 (133)
Q Consensus 72 ~C~~~--~~~C~C~~g~~---g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G~ 132 (133)
.|.+. .++|.|++||. |..|+.+ ..|..+-.|. .+|.++.+ +|.|++||++.
T Consensus 307 ~C~~~~~~~~C~C~~G~~~~~~~~C~di-------deC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 307 VCNDLKIGYECLCPDGFQLVAQRRCEDI-------DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp TCCCCTTCCCCCCCSSSCCCSSSCCCCC-------CCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred CcccCCCCcEEeCCCCeEcCCCCcccCc-------cccCCCCccc--cccccCCCCeeeeeecccccC
Confidence 45443 67888888887 4444320 1121111232 36666544 89999999863
No 91
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=95.59 E-value=0.013 Score=38.19 Aligned_cols=27 Identities=37% Similarity=0.979 Sum_probs=23.8
Q ss_pred CCCCCCeecCCCCeeeCCCCcccCCCCC
Q psy11501 66 RCQNGAICNPANGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 66 ~C~~~~~C~~~~~~C~C~~g~~g~~c~~ 93 (133)
.|.++|.|. ...+|.|++||.|.+|+.
T Consensus 154 ~C~ngG~Cv-~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 154 GCRNGGFCN-ERRICECPDGFHGPHCEG 180 (188)
T ss_dssp CCCTTCEEC-TTSCEECCTTCBTTTTCB
T ss_pred CCCCCCEeC-CCCcccCcCCCCCCCCcC
Confidence 689999996 478999999999999984
No 92
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.18 E-value=0.026 Score=44.62 Aligned_cols=51 Identities=35% Similarity=0.891 Sum_probs=31.2
Q ss_pred eecCC--CCeeeCCCCcc---cCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCcc
Q psy11501 72 ICNPA--NGQCLCAPGWM---GSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKG 131 (133)
Q Consensus 72 ~C~~~--~~~C~C~~g~~---g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~G 131 (133)
.|.+. .+.|.|++||. |..|+.+ ..|..+..| ..+|.+..+ +|.|++||..
T Consensus 325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~di-------deC~~~~~C--~~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 325 VCNDLKIGYECLCPDGFQLVAQRRCEDI-------DECQDPDTC--SQLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp EEEECSBSEEEECCTTCEEETTTEEECC-------CCCSSSSSC--TTTCCBCSSCBCCCCCSSEEC
T ss_pred cccCCCCCcccCCCCCCccCCCCccccC-------cccCCCCCC--CCeeecCCCCceeecCCCCEe
Confidence 56544 67899999996 5555421 122212223 246766544 8999999975
No 93
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.55 E-value=0.011 Score=42.57 Aligned_cols=55 Identities=25% Similarity=0.791 Sum_probs=16.2
Q ss_pred EEecC--CCeeecCCCCc----cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcc----cCCCC
Q psy11501 29 ECHPA--TGECSCQPGFT----GSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWM----GSVCN 92 (133)
Q Consensus 29 ~C~~~--~~~C~C~~g~~----G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~----g~~c~ 92 (133)
.|.+. .+.|.|++||. |..|+ ...+ |....+|.. .|.+. .++|.|++||. +..|.
T Consensus 16 ~C~~~~g~~~C~C~~G~~l~~~~~~C~-d~~e------C~~~~~C~~--~C~~~~g~~~C~C~~g~~l~~d~~~C~ 82 (386)
T 3v65_B 16 KCQMIRGAVQCTCHTGYRLTEDGRTCQ-DVNE------CAEEGYCSQ--GCTNSEGAFQCWCEAGYELRPDRRSCK 82 (386)
T ss_dssp -------------------------------------------CCTT--EEC-----CCEECCTTEEECTTSSCEE
T ss_pred CCcCCCCCcEeECCCCceECCCCCccC-ccce------eCCcCcccC--cCCCCCCCCeEEECCCceEcCCCCeEC
Confidence 56433 57999999998 77785 3333 543335654 37655 78999999998 55564
No 94
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=94.13 E-value=0.045 Score=34.22 Aligned_cols=31 Identities=35% Similarity=0.856 Sum_probs=25.6
Q ss_pred CCCCCCCCEEecC----CC-eeecCCCCccCCCCcc
Q psy11501 21 ECQCRNGAECHPA----TG-ECSCQPGFTGSLCEER 51 (133)
Q Consensus 21 ~C~C~~~g~C~~~----~~-~C~C~~g~~G~~C~~~ 51 (133)
.|+|.++|+|... .+ .|.|+++|.|..|++.
T Consensus 12 ~cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~ 47 (145)
T 2i9a_A 12 NCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID 47 (145)
T ss_dssp CCCCCTTCEEEECSSSTTCEEEECCTTEESTTSCEE
T ss_pred CCCCCCCCCcCCCccccCCccccCCCCCCCCceecc
Confidence 5799999999753 23 7999999999999853
No 95
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=93.99 E-value=0.029 Score=33.98 Aligned_cols=28 Identities=32% Similarity=0.772 Sum_probs=22.4
Q ss_pred CCCCCCeecCC----CC-eeeCCCCcccCCCCC
Q psy11501 66 RCQNGAICNPA----NG-QCLCAPGWMGSVCNV 93 (133)
Q Consensus 66 ~C~~~~~C~~~----~~-~C~C~~g~~g~~c~~ 93 (133)
+|.++++|.+. .+ +|.|+++|+|..|++
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~ 34 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI 34 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCE
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccc
Confidence 68888899643 34 899999999998875
No 96
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.87 E-value=0.043 Score=27.90 Aligned_cols=27 Identities=30% Similarity=0.882 Sum_probs=20.6
Q ss_pred CCCCCCeecCC----CCeeeCCCCcccCCCCC
Q psy11501 66 RCQNGAICNPA----NGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 66 ~C~~~~~C~~~----~~~C~C~~g~~g~~c~~ 93 (133)
.|.++ +|... ...|.|++||+|.+|+.
T Consensus 15 yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 15 FCFHG-TCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred cccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence 57775 77532 56899999999999874
No 97
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=93.84 E-value=0.012 Score=45.83 Aligned_cols=45 Identities=22% Similarity=0.585 Sum_probs=33.1
Q ss_pred ecCCCCccCCCCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCCCcccCCCCC
Q psy11501 38 SCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 38 ~C~~g~~G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~~~~C~C~~g~~g~~c~~ 93 (133)
.|.++|+|.+|... ..|.. .|..+|.|. .++|.|.+||.|..|..
T Consensus 521 ~C~~gw~g~dc~i~-------~~Cp~--~C~ghG~C~--~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 521 DKQQTWAIDNVYIG-------DGCLD--MCSGHGRCV--QGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp CTTCCEEEEEEEEE-------SCSSG--GGGGSEEEE--TTEEEECTTEESTTSCE
T ss_pred ccCCCccccccccc-------CCCCc--ccCCCcEEC--CCCEeeCCCccCCCcCc
Confidence 56778888777610 11322 578889998 68999999999999874
No 98
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=93.63 E-value=0.034 Score=38.63 Aligned_cols=58 Identities=31% Similarity=0.732 Sum_probs=36.3
Q ss_pred CCCCCEEecCCCeeecCCCCccCCCCccCCCCCCCC-----CCCCC---CCCCCCCeecCCCCeeeCCCCcc
Q psy11501 24 CRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGP-----SCINR---CRCQNGAICNPANGQCLCAPGWM 87 (133)
Q Consensus 24 C~~~g~C~~~~~~C~C~~g~~G~~C~~~C~~g~~g~-----~C~~~---~~C~~~~~C~~~~~~C~C~~g~~ 87 (133)
|+.+|++. -+.|.|.+||.|..|+ |+..-... .|... ..|...|.|. -++|.|...|.
T Consensus 198 C~g~G~~~--CG~C~C~~g~~G~~Ce--C~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~--CG~C~C~~~~~ 263 (280)
T 2p26_A 198 CHGKGFLE--CGICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDV 263 (280)
T ss_dssp GGGSEEEE--TTEEEECTTEESTTSC--EECTTSCHHHHHHTTCSSTTSCGGGGSEEEE--TTEEEECCCSS
T ss_pred cCCCCeEC--CCceeCCCCCcCCcce--ecCCccccccccccCCCCCCCCccCCCceEe--CCeeECcCCCC
Confidence 44445554 5789999999999996 43321100 34321 1366677776 67899977754
No 99
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.28 E-value=0.023 Score=40.86 Aligned_cols=50 Identities=30% Similarity=0.808 Sum_probs=11.6
Q ss_pred eecCC--CCeeeCCCCcc----cCCCCCCCCCCccCCCCCCCCCCCCCCeeccCCC--ceeCCCCCc
Q psy11501 72 ICNPA--NGQCLCAPGWM----GSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFK 130 (133)
Q Consensus 72 ~C~~~--~~~C~C~~g~~----g~~c~~~c~~g~~g~~c~~~c~C~~~g~C~~~~g--~C~C~~g~~ 130 (133)
.|.+. .+.|.|++||. |..|+.. ..|...-.|.+ .|.+..+ +|.|++||.
T Consensus 16 ~C~~~~g~~~C~C~~G~~l~~~~~~C~d~-------~eC~~~~~C~~--~C~~~~g~~~C~C~~g~~ 73 (386)
T 3v65_B 16 KCQMIRGAVQCTCHTGYRLTEDGRTCQDV-------NECAEEGYCSQ--GCTNSEGAFQCWCEAGYE 73 (386)
T ss_dssp -------------------------------------------CCTT--EEC-----CCEECCTTEE
T ss_pred CCcCCCCCcEeECCCCceECCCCCccCcc-------ceeCCcCcccC--cCCCCCCCCeEEECCCce
Confidence 55433 47899999998 6666421 11211113433 3766544 899999997
No 100
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.26 E-value=0.069 Score=27.10 Aligned_cols=27 Identities=33% Similarity=0.940 Sum_probs=20.3
Q ss_pred CCCCCCEEec----CCCeeecCCCCccCCCCc
Q psy11501 23 QCRNGAECHP----ATGECSCQPGFTGSLCEE 50 (133)
Q Consensus 23 ~C~~~g~C~~----~~~~C~C~~g~~G~~C~~ 50 (133)
.|.++ +|.. ....|.|++||+|..|+.
T Consensus 15 yC~nG-~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 15 FCFHG-TCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred cccCC-EEeeccCCCCeEEECCCCCcccCCCc
Confidence 35664 8863 256899999999999973
No 101
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=93.25 E-value=0.02 Score=35.99 Aligned_cols=28 Identities=43% Similarity=0.962 Sum_probs=23.1
Q ss_pred CCCCCCEEecC--CCeeecCCCCccCCCCc
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFTGSLCEE 50 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~ 50 (133)
+|.++++|.+. .++|.|++||.|..|+.
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~ 155 (162)
T 1g1s_A 126 SCSKQGECLETIGNYTCSCYPGFYGPECEY 155 (162)
T ss_dssp GGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred CCCCCCEEecCCCCceEeCCCCCcCccccc
Confidence 46777888854 67999999999999984
No 102
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.13 E-value=0.043 Score=41.97 Aligned_cols=28 Identities=36% Similarity=0.923 Sum_probs=24.8
Q ss_pred CCCCCCEEec---CCCeeecC-CCCccCCCCc
Q psy11501 23 QCRNGAECHP---ATGECSCQ-PGFTGSLCEE 50 (133)
Q Consensus 23 ~C~~~g~C~~---~~~~C~C~-~g~~G~~C~~ 50 (133)
+|.++|+|.+ ..+.|.|+ +||+|.+|+.
T Consensus 8 PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 8 PCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 7999999984 36899999 9999999985
No 103
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=92.80 E-value=0.035 Score=34.88 Aligned_cols=28 Identities=32% Similarity=0.835 Sum_probs=23.4
Q ss_pred CCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501 66 RCQNGAICNPA--NGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 66 ~C~~~~~C~~~--~~~C~C~~g~~g~~c~~ 93 (133)
+|.++++|.+. .++|.|++||.|..|+.
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~ 155 (162)
T 1g1s_A 126 SCSKQGECLETIGNYTCSCYPGFYGPECEY 155 (162)
T ss_dssp GGGGSEEEEECSSSEEEEECTTEESTTSCE
T ss_pred CCCCCCEEecCCCCceEeCCCCCcCccccc
Confidence 67778888765 67999999999998875
No 104
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=92.66 E-value=0.044 Score=41.61 Aligned_cols=28 Identities=25% Similarity=0.796 Sum_probs=25.0
Q ss_pred CCCCCCEEec-C--CCeeecC-CCCccCCCCc
Q psy11501 23 QCRNGAECHP-A--TGECSCQ-PGFTGSLCEE 50 (133)
Q Consensus 23 ~C~~~g~C~~-~--~~~C~C~-~g~~G~~C~~ 50 (133)
+|.++|+|.+ . .++|.|+ +||+|.+|+.
T Consensus 9 PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 9 PCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp CCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 7999999987 4 5799999 9999999985
No 105
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=92.29 E-value=0.047 Score=41.46 Aligned_cols=32 Identities=34% Similarity=0.854 Sum_probs=26.7
Q ss_pred CCCCCCCCCCCeecC-C--CCeeeCC-CCcccCCCCC
Q psy11501 61 CINRCRCQNGAICNP-A--NGQCLCA-PGWMGSVCNV 93 (133)
Q Consensus 61 C~~~~~C~~~~~C~~-~--~~~C~C~-~g~~g~~c~~ 93 (133)
|... +|.++|+|.+ . .+.|.|+ +||.|.+|+.
T Consensus 5 C~~~-PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 5 CCYY-PCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40 (553)
T ss_dssp GGGC-CCCTTCEEEEETTTEEEEECTTSSEETTTTCE
T ss_pred CCCC-CCCCCCCcCCCCCCceEeeCCCCCcCCCCCCC
Confidence 4443 8999999986 4 6899999 9999999985
No 106
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=92.15 E-value=0.08 Score=40.49 Aligned_cols=32 Identities=31% Similarity=0.827 Sum_probs=26.8
Q ss_pred CCCCCCCCCCCeecC---CCCeeeCC-CCcccCCCCC
Q psy11501 61 CINRCRCQNGAICNP---ANGQCLCA-PGWMGSVCNV 93 (133)
Q Consensus 61 C~~~~~C~~~~~C~~---~~~~C~C~-~g~~g~~c~~ 93 (133)
|... +|.++|+|.+ ..+.|.|+ +||.|.+|+.
T Consensus 4 C~s~-PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 4 CCSN-PCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp TTTC-CCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCC-CCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 5444 8999999984 36899999 9999999986
No 107
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=92.06 E-value=0.1 Score=32.59 Aligned_cols=29 Identities=34% Similarity=0.878 Sum_probs=23.6
Q ss_pred CCCCCCCeecCC----CC-eeeCCCCcccCCCCC
Q psy11501 65 CRCQNGAICNPA----NG-QCLCAPGWMGSVCNV 93 (133)
Q Consensus 65 ~~C~~~~~C~~~----~~-~C~C~~g~~g~~c~~ 93 (133)
++|.++++|... .+ +|.|+++|.|..|++
T Consensus 13 cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei 46 (145)
T 2i9a_A 13 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI 46 (145)
T ss_dssp CCCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred CCCCCCCCcCCCccccCCccccCCCCCCCCceec
Confidence 489999999643 33 799999999999975
No 108
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=92.01 E-value=0.043 Score=27.84 Aligned_cols=27 Identities=30% Similarity=0.882 Sum_probs=20.2
Q ss_pred CCCCCCeec--CC--CCeeeCCCCcccCCCCC
Q psy11501 66 RCQNGAICN--PA--NGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 66 ~C~~~~~C~--~~--~~~C~C~~g~~g~~c~~ 93 (133)
.|.+ |+|. .. ...|.|++||+|.+|+.
T Consensus 15 yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 15 YCIK-GRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp SCTT-CCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred cccC-CEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 5777 6774 11 45799999999999984
No 109
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=91.92 E-value=0.059 Score=37.41 Aligned_cols=59 Identities=25% Similarity=0.677 Sum_probs=37.0
Q ss_pred CCCCCeecCCCCeeeCCCCcccCCCCCCCCCCccC-----CCCCCC---CCCCCCCeeccCCCceeCCCCCcc
Q psy11501 67 CQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWG-----QGCTVP---CECFNGASCHHVTGECQCEPGFKG 131 (133)
Q Consensus 67 C~~~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g-----~~c~~~---c~C~~~g~C~~~~g~C~C~~g~~G 131 (133)
|...|.+. -++|.|.+||.|..|+ |+..-.. ..|..+ -.|.+.|+| .-|+|.|..++.+
T Consensus 198 C~g~G~~~--CG~C~C~~g~~G~~Ce--C~~~~~~~~~~~~~C~~~~~~~~CSgrG~C--~CG~C~C~~~~~~ 264 (280)
T 2p26_A 198 CHGKGFLE--CGICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDC--VCGQCLCHTSDVP 264 (280)
T ss_dssp GGGSEEEE--TTEEEECTTEESTTSC--EECTTSCHHHHHHTTCSSTTSCGGGGSEEE--ETTEEEECCCSST
T ss_pred cCCCCeEC--CCceeCCCCCcCCcce--ecCCccccccccccCCCCCCCCccCCCceE--eCCeeECcCCCCC
Confidence 44445554 5789999999999996 3321100 034211 147777888 4589999877654
No 110
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=90.66 E-value=0.16 Score=28.31 Aligned_cols=26 Identities=35% Similarity=1.007 Sum_probs=19.9
Q ss_pred CCCCCCeecCC----CCeeeCCCCcccCCCC
Q psy11501 66 RCQNGAICNPA----NGQCLCAPGWMGSVCN 92 (133)
Q Consensus 66 ~C~~~~~C~~~----~~~C~C~~g~~g~~c~ 92 (133)
.|.++ .|... ...|.|++||.|.+|+
T Consensus 47 yClnG-~C~~i~~~~~~~C~C~~GYtG~RCE 76 (79)
T 1xdt_R 47 FCIHG-ECKYVKELRAPSCICHPGYHGERCH 76 (79)
T ss_dssp CCSSE-EECCBGGGTBCCEEECTTEESTTCC
T ss_pred cCCCC-EeeeecCCCCeEEEcCCCccccccc
Confidence 57775 88422 4689999999999987
No 111
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=90.16 E-value=0.31 Score=37.88 Aligned_cols=47 Identities=28% Similarity=0.669 Sum_probs=29.3
Q ss_pred CCeeecCCCCc---cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccC
Q psy11501 34 TGECSCQPGFT---GSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGS 89 (133)
Q Consensus 34 ~~~C~C~~g~~---G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~ 89 (133)
.+.|.|++||. |..|+ ...+ |....+|. ..|.+. .++|.|++||.+.
T Consensus 314 ~~~C~C~~G~~~~~~~~C~-dide------C~~~~~C~--~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 314 GYECLCPDGFQLVAQRRCE-DIDE------CQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp CCCCCCCSSSCCCSSSCCC-CCCC------CSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred CcEEeCCCCeEcCCCCccc-Cccc------cCCCCccc--cccccCCCCeeeeeecccccC
Confidence 57888888887 55554 2222 43222343 255544 7899999999864
No 112
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=89.59 E-value=0.16 Score=38.46 Aligned_cols=64 Identities=25% Similarity=0.691 Sum_probs=40.2
Q ss_pred CCCCCEEecCCCeeecCCCCc--cCCCCccCCCCCCCCCCCCC-C-CCCCCCee-cCCCCeeeCCCCccc
Q psy11501 24 CRNGAECHPATGECSCQPGFT--GSLCEERCPPGTHGPSCINR-C-RCQNGAIC-NPANGQCLCAPGWMG 88 (133)
Q Consensus 24 C~~~g~C~~~~~~C~C~~g~~--G~~C~~~C~~g~~g~~C~~~-~-~C~~~~~C-~~~~~~C~C~~g~~g 88 (133)
|+..|......|+|.|.+||. +..|+ .|++||+....... | +|..+..- ....+.|.|..+|.-
T Consensus 252 C~~dG~w~~p~G~C~C~~G~e~~~~~C~-aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~r 320 (536)
T 3fl7_A 252 CAVDGEWLVPIGQCLCQAGYEKVEDACQ-ACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFR 320 (536)
T ss_dssp ECTTSCBCCCBCCCEECTTEEEETTEEE-ECCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCBC
T ss_pred EcCCCCEecccCcEeccCccccCCceee-ecCCCCCcccCCCCccccCCCCCCCCCCCccEEEEeccccc
Confidence 455555554578999999997 66787 89999875543221 1 23332221 122678999888763
No 113
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=88.89 E-value=0.15 Score=31.96 Aligned_cols=28 Identities=29% Similarity=0.800 Sum_probs=22.7
Q ss_pred CCCCCCEEec--CCCeeecCCCCccCCCCc
Q psy11501 23 QCRNGAECHP--ATGECSCQPGFTGSLCEE 50 (133)
Q Consensus 23 ~C~~~g~C~~--~~~~C~C~~g~~G~~C~~ 50 (133)
+|.+++.|.. ..+.|.|.+||.|..|+.
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~ 155 (164)
T 3cfw_A 126 SCSGHGECVEIINNYTCNCDVGYYGPQCQF 155 (164)
T ss_dssp SSCSSEEEEEETTEEEEEECTTCBSSSSCB
T ss_pred cCCCCCeecccCCCceeeeCCCcccccccc
Confidence 4777888874 367899999999999973
No 114
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=87.83 E-value=0.54 Score=37.23 Aligned_cols=52 Identities=27% Similarity=0.662 Sum_probs=33.5
Q ss_pred EEecC--CCeeecCCCCc---cCCCCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCcccC
Q psy11501 29 ECHPA--TGECSCQPGFT---GSLCEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGS 89 (133)
Q Consensus 29 ~C~~~--~~~C~C~~g~~---G~~C~~~C~~g~~g~~C~~~~~C~~~~~C~~~--~~~C~C~~g~~g~ 89 (133)
.|.+. .+.|.|++||. |..|+ ...+ |.....|. ..|.+. .++|.|.+||...
T Consensus 325 ~C~~~~~~y~C~C~~Gy~l~~g~~C~-dide------C~~~~~C~--~~C~n~~gsy~C~C~~Gy~l~ 383 (791)
T 3m0c_C 325 VCNDLKIGYECLCPDGFQLVAQRRCE-DIDE------CQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 383 (791)
T ss_dssp EEEECSBSEEEECCTTCEEETTTEEE-CCCC------CSSSSSCT--TTCCBCSSCBCCCCCSSEECC
T ss_pred cccCCCCCcccCCCCCCccCCCCccc-cCcc------cCCCCCCC--CeeecCCCCceeecCCCCEeC
Confidence 67643 67899999995 66675 2222 44333343 256544 7899999999753
No 115
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=87.09 E-value=0.097 Score=32.54 Aligned_cols=28 Identities=39% Similarity=1.029 Sum_probs=22.3
Q ss_pred CCCCCCEEecC--CCeeecCCCCccCCCCc
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFTGSLCEE 50 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~G~~C~~ 50 (133)
+|.+++.|.+. .+.|.|.++|+|+.|+.
T Consensus 126 pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 126 SCSGHGECVETINNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp GGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred CCCCCCEeecCCCCeeEECCCCccCccccc
Confidence 46667888754 57899999999999974
No 116
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=86.14 E-value=0.34 Score=36.64 Aligned_cols=63 Identities=32% Similarity=0.774 Sum_probs=38.6
Q ss_pred CCCCCeecCCCCeeeCCCCcc--cCCCCCCCCCCccCCCCCC-CC-CCCCCCe-eccCCCceeCCCCCc
Q psy11501 67 CQNGAICNPANGQCLCAPGWM--GSVCNVPCTPGMWGQGCTV-PC-ECFNGAS-CHHVTGECQCEPGFK 130 (133)
Q Consensus 67 C~~~~~C~~~~~~C~C~~g~~--g~~c~~~c~~g~~g~~c~~-~c-~C~~~g~-C~~~~g~C~C~~g~~ 130 (133)
|...|.+....++|.|.+||. +..|+ .|++|++...... .| +|..+.. -......|.|..+|.
T Consensus 252 C~~dG~w~~p~G~C~C~~G~e~~~~~C~-aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 252 CAVDGEWLVPIGQCLCQAGYEKVEDACQ-ACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFF 319 (536)
T ss_dssp ECTTSCBCCCBCCCEECTTEEEETTEEE-ECCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCB
T ss_pred EcCCCCEecccCcEeccCccccCCceee-ecCCCCCcccCCCCccccCCCCCCCCCCCccEEEEecccc
Confidence 555566655579999999998 55677 6999987554322 22 3332211 111233788877765
No 117
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=85.27 E-value=0.47 Score=23.95 Aligned_cols=26 Identities=35% Similarity=0.884 Sum_probs=19.8
Q ss_pred CCCCCEEe--cC--CCeeecCCCCccCCCCc
Q psy11501 24 CRNGAECH--PA--TGECSCQPGFTGSLCEE 50 (133)
Q Consensus 24 C~~~g~C~--~~--~~~C~C~~g~~G~~C~~ 50 (133)
|.+ |+|. .. ...|.|+++|+|..|+.
T Consensus 20 C~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 20 CIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp CSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 565 6896 22 35799999999999973
No 118
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=83.87 E-value=0.3 Score=30.52 Aligned_cols=28 Identities=29% Similarity=0.742 Sum_probs=22.9
Q ss_pred CCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501 66 RCQNGAICNPA--NGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 66 ~C~~~~~C~~~--~~~C~C~~g~~g~~c~~ 93 (133)
+|.+.+.|... .+.|.|.+||.|..|+.
T Consensus 126 ~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~ 155 (164)
T 3cfw_A 126 SCSGHGECVEIINNYTCNCDVGYYGPQCQF 155 (164)
T ss_dssp SSCSSEEEEEETTEEEEEECTTCBSSSSCB
T ss_pred cCCCCCeecccCCCceeeeCCCcccccccc
Confidence 57778888743 67999999999998874
No 119
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=83.73 E-value=0.24 Score=30.71 Aligned_cols=28 Identities=32% Similarity=0.812 Sum_probs=22.4
Q ss_pred CCCCCCeecCC--CCeeeCCCCcccCCCCC
Q psy11501 66 RCQNGAICNPA--NGQCLCAPGWMGSVCNV 93 (133)
Q Consensus 66 ~C~~~~~C~~~--~~~C~C~~g~~g~~c~~ 93 (133)
+|.+.+.|.+. .+.|.|.++|.|.+|+.
T Consensus 126 pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~ 155 (157)
T 1g1t_A 126 SCSGHGECVETINNYTCKCDPGFSGLKCEQ 155 (157)
T ss_dssp GGGGSEEEEEETTEEEEEECTTEESTTSCE
T ss_pred CCCCCCEeecCCCCeeEECCCCccCccccc
Confidence 56777888654 67899999999999874
No 120
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=80.22 E-value=1.2 Score=32.09 Aligned_cols=32 Identities=28% Similarity=0.761 Sum_probs=25.6
Q ss_pred CCCCCCCCCCCeecCC--CCeeeCCC-CcccCCCCC
Q psy11501 61 CINRCRCQNGAICNPA--NGQCLCAP-GWMGSVCNV 93 (133)
Q Consensus 61 C~~~~~C~~~~~C~~~--~~~C~C~~-g~~g~~c~~ 93 (133)
|... +|.+++.|.+. .+.|.|+. +|.|..|+.
T Consensus 188 C~~~-pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 188 CQED-SCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp CCTT-SSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred cccc-cCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence 4443 79999999765 67999996 999999974
No 121
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=78.58 E-value=0.81 Score=22.78 Aligned_cols=19 Identities=42% Similarity=1.048 Sum_probs=15.1
Q ss_pred CeeccCCC--ceeCCCCCccC
Q psy11501 114 ASCHHVTG--ECQCEPGFKGQ 132 (133)
Q Consensus 114 g~C~~~~g--~C~C~~g~~G~ 132 (133)
.+|+++.+ +|.|++||++.
T Consensus 24 ~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 24 HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp SEEEEETTEEEEECSTTCEEC
T ss_pred CEeECCCCCeEEECCCCCeEC
Confidence 47887655 89999999863
No 122
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=78.39 E-value=1.1 Score=32.26 Aligned_cols=28 Identities=32% Similarity=0.860 Sum_probs=24.0
Q ss_pred CCCCCCEEecC--CCeeecCC-CCccCCCCc
Q psy11501 23 QCRNGAECHPA--TGECSCQP-GFTGSLCEE 50 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~-g~~G~~C~~ 50 (133)
+|.+++.|.+. .+.|.|+. +|.|..|+.
T Consensus 192 pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~ 222 (410)
T 3asi_A 192 SCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 222 (410)
T ss_dssp SSSTTCEEEECSSSEEEECTTTSEESTTSCE
T ss_pred cCCCCCEecCCCCCceEeccCCcccCCCCCC
Confidence 68899999864 67999996 999999984
No 123
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=68.23 E-value=1.7 Score=23.44 Aligned_cols=9 Identities=33% Similarity=1.032 Sum_probs=6.6
Q ss_pred eeCCCCCcc
Q psy11501 123 CQCEPGFKG 131 (133)
Q Consensus 123 C~C~~g~~G 131 (133)
..|++||.+
T Consensus 55 ~~C~~Gy~~ 63 (71)
T 2kl7_A 55 NPCPPGYEP 63 (71)
T ss_dssp CCSCTTEEE
T ss_pred cCCCCCeee
Confidence 458888865
No 124
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=63.76 E-value=2.3 Score=29.56 Aligned_cols=27 Identities=37% Similarity=0.744 Sum_probs=20.8
Q ss_pred CCCCCCEEecC--CCeeecCCCCcc--CCCC
Q psy11501 23 QCRNGAECHPA--TGECSCQPGFTG--SLCE 49 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~~g~~G--~~C~ 49 (133)
+|..++.|.+. ++.|.|.+||.| ..|.
T Consensus 14 ~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 14 QCSVHAECRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp GSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred CCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence 47777889864 779999999984 4564
No 125
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=62.78 E-value=3.7 Score=34.16 Aligned_cols=32 Identities=28% Similarity=0.787 Sum_probs=25.6
Q ss_pred CCCCCCCCCCCeecCC--CCeeeCC-CCcccCCCCC
Q psy11501 61 CINRCRCQNGAICNPA--NGQCLCA-PGWMGSVCNV 93 (133)
Q Consensus 61 C~~~~~C~~~~~C~~~--~~~C~C~-~g~~g~~c~~ 93 (133)
|... +|.+++.|.+. .+.|.|+ ++|.|..|+.
T Consensus 1020 C~~~-pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~ 1054 (1245)
T 3qcw_A 1020 CQED-SCSNQGVCLQQWDGFSCDCSMTSFSGPLCND 1054 (1245)
T ss_dssp CCTT-SSSSSCEEEEETTEEEEECTTSSCBSTTSCB
T ss_pred eECC-cCCCCCEeCCCCCCCEEECCCCCCCCCCccC
Confidence 4443 79999999754 6799999 6999999975
No 126
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=61.72 E-value=3.4 Score=29.40 Aligned_cols=39 Identities=26% Similarity=0.628 Sum_probs=28.5
Q ss_pred CCCCCCC-CEEecCC--CeeecCCCCccCCCCccCCCCCCCCC
Q psy11501 21 ECQCRNG-AECHPAT--GECSCQPGFTGSLCEERCPPGTHGPS 60 (133)
Q Consensus 21 ~C~C~~~-g~C~~~~--~~C~C~~g~~G~~C~~~C~~g~~g~~ 60 (133)
.|.|..+ ..|.... ..|.|..+..|..|+ .|.++|.+..
T Consensus 269 ~C~CnGHA~~C~~~~g~~~C~C~HnT~G~~Ce-~C~p~y~~~p 310 (338)
T 3tbd_A 269 RCKCNLHANLCSMREGSLQCECEHNTTGPDCG-KCKKNFRTRS 310 (338)
T ss_dssp EECCTTBCSCEEEETTEEEECCCTTEESTTSC-EECTTCBSSC
T ss_pred cccccCCcCccCCCCCCceecCCCCCCCCCCc-ccCccccCCC
Confidence 3567654 4576433 469999999999998 8999886543
No 127
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=61.10 E-value=1.2 Score=32.26 Aligned_cols=22 Identities=27% Similarity=0.798 Sum_probs=18.7
Q ss_pred CCCCCCeeccCCCceeCCCCCccC
Q psy11501 109 ECFNGASCHHVTGECQCEPGFKGQ 132 (133)
Q Consensus 109 ~C~~~g~C~~~~g~C~C~~g~~G~ 132 (133)
.|..+|.|++ ++|+|.+||.|.
T Consensus 197 ~CsGhG~C~~--g~C~Cd~G~~g~ 218 (387)
T 2ddu_A 197 YCSGHGDCIS--GVCFCDLGYTAA 218 (387)
T ss_dssp GGGGSEEEET--TEEEECTTEEEE
T ss_pred ccCCCceecC--CeEEecCCcccC
Confidence 6888999954 899999999884
No 128
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=59.55 E-value=5.1 Score=33.37 Aligned_cols=28 Identities=32% Similarity=0.910 Sum_probs=24.2
Q ss_pred CCCCCCEEecC--CCeeecC-CCCccCCCCc
Q psy11501 23 QCRNGAECHPA--TGECSCQ-PGFTGSLCEE 50 (133)
Q Consensus 23 ~C~~~g~C~~~--~~~C~C~-~g~~G~~C~~ 50 (133)
+|.+++.|.+. .+.|.|+ ++|.|..|+.
T Consensus 626 pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~~ 656 (1245)
T 3qcw_A 626 PCKNNGMCRDGWNRYVCDCSGTGYLGRSCER 656 (1245)
T ss_dssp CCCTTCEEEECSSSEEEECTTTTEESTTSCE
T ss_pred CCCCCCEEeCCCCCeEEECCCCCcccccCcc
Confidence 68999999864 6799999 7999999974
No 129
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=57.36 E-value=3.2 Score=20.94 Aligned_cols=16 Identities=31% Similarity=0.953 Sum_probs=12.7
Q ss_pred eeccCCC--ceeCCCCCc
Q psy11501 115 SCHHVTG--ECQCEPGFK 130 (133)
Q Consensus 115 ~C~~~~g--~C~C~~g~~ 130 (133)
.|.++.+ +|.|++||.
T Consensus 14 ~C~nt~Gsy~C~C~~Gy~ 31 (55)
T 2jkh_L 14 FCHEEQNSVVCSCARGYT 31 (55)
T ss_dssp EEEEETTEEEEECCTTEE
T ss_pred EeEcCCCCeEEeCCCCCE
Confidence 6777655 899999996
No 130
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=53.36 E-value=3.1 Score=30.19 Aligned_cols=23 Identities=30% Similarity=0.873 Sum_probs=20.1
Q ss_pred CCCCCCEEecCCCeeecCCCCccCC
Q psy11501 23 QCRNGAECHPATGECSCQPGFTGSL 47 (133)
Q Consensus 23 ~C~~~g~C~~~~~~C~C~~g~~G~~ 47 (133)
.|+.+|.|. .++|.|.+||.|..
T Consensus 197 ~CsGhG~C~--~g~C~Cd~G~~g~d 219 (387)
T 2ddu_A 197 YCSGHGDCI--SGVCFCDLGYTAAQ 219 (387)
T ss_dssp GGGGSEEEE--TTEEEECTTEEEET
T ss_pred ccCCCceec--CCeEEecCCcccCC
Confidence 488999997 58999999999975
No 131
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=52.31 E-value=15 Score=21.43 Aligned_cols=60 Identities=22% Similarity=0.430 Sum_probs=33.9
Q ss_pred CCCCCeecCC---CCeeeCCCCcccCCCCCCCCCCccCCCCCCC-CCCCCCCeeccCC-C--ceeCCCCCc
Q psy11501 67 CQNGAICNPA---NGQCLCAPGWMGSVCNVPCTPGMWGQGCTVP-CECFNGASCHHVT-G--ECQCEPGFK 130 (133)
Q Consensus 67 C~~~~~C~~~---~~~C~C~~g~~g~~c~~~c~~g~~g~~c~~~-c~C~~~g~C~~~~-g--~C~C~~g~~ 130 (133)
|.....|... ...|.|..+|.+.-- .|.+. ...|... --|...++|.... . .|.|.++|.
T Consensus 18 Cp~NA~C~r~~~G~e~CrCl~gY~~dg~--~Cv~~--Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 18 VPENAACYRYLDGTEEWRCLLGFKEVGG--KCVPA--SITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp CCTTEEEEECTTSCEEEEECTTEEECSS--SEEEC--CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred CCCCCCeEECCCCCEeEEEECCeeccCC--EEEEC--CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 5555666542 558999999997411 22221 1112111 1366677887654 2 799988853
No 132
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=51.60 E-value=4.9 Score=27.89 Aligned_cols=27 Identities=26% Similarity=0.621 Sum_probs=20.2
Q ss_pred CCCCCCeecCC--CCeeeCCCCccc--CCCC
Q psy11501 66 RCQNGAICNPA--NGQCLCAPGWMG--SVCN 92 (133)
Q Consensus 66 ~C~~~~~C~~~--~~~C~C~~g~~g--~~c~ 92 (133)
.|.....|.+. .+.|.|.+||.| ..|.
T Consensus 14 ~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 14 QCSVHAECRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp GSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred CCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence 46666788766 789999999985 4444
No 133
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=50.46 E-value=8 Score=28.85 Aligned_cols=16 Identities=56% Similarity=1.348 Sum_probs=8.4
Q ss_pred CCeeecCCCCccCCCC
Q psy11501 34 TGECSCQPGFTGSLCE 49 (133)
Q Consensus 34 ~~~C~C~~g~~G~~C~ 49 (133)
=|.|.|.+||.|..|+
T Consensus 457 CG~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 457 CGVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTEEEECTTC------
T ss_pred CCceECcCCCCCCCCC
Confidence 3688999999999885
No 134
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=45.75 E-value=4.5 Score=20.04 Aligned_cols=16 Identities=25% Similarity=0.843 Sum_probs=10.4
Q ss_pred eeccCCC--ceeCCCCCc
Q psy11501 115 SCHHVTG--ECQCEPGFK 130 (133)
Q Consensus 115 ~C~~~~g--~C~C~~g~~ 130 (133)
.|.+..+ +|.|++||.
T Consensus 11 ~C~n~~gs~~C~C~~Gy~ 28 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYV 28 (51)
T ss_dssp CCCEETTEECCCCCTTEE
T ss_pred EeEcCCCCeEEeCCCCcE
Confidence 3444433 788888886
No 135
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=43.97 E-value=7.9 Score=29.15 Aligned_cols=26 Identities=27% Similarity=0.747 Sum_probs=22.0
Q ss_pred CCCCCEEecCCCeeecCCCCccCCCCc
Q psy11501 24 CRNGAECHPATGECSCQPGFTGSLCEE 50 (133)
Q Consensus 24 C~~~g~C~~~~~~C~C~~g~~G~~C~~ 50 (133)
|..+|.|.+ ...|+|.+||..++|+.
T Consensus 456 C~~~GVCNn-~~~CHC~~GwaPP~C~~ 481 (510)
T 3g5c_A 456 CSGNGVCSN-ELKCVCNRHWIGSDCNT 481 (510)
T ss_dssp GGGTEEEBT-TSCEEECTTEESTTSCE
T ss_pred cCCCCeeCC-CCCcCCCCCCCCCCCCC
Confidence 777888864 56899999999999984
No 136
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=33.22 E-value=9 Score=28.81 Aligned_cols=15 Identities=67% Similarity=1.440 Sum_probs=0.0
Q ss_pred CeeecCCCCccCCCC
Q psy11501 35 GECSCQPGFTGSLCE 49 (133)
Q Consensus 35 ~~C~C~~g~~G~~C~ 49 (133)
|.|.|.+||.|..|+
T Consensus 479 G~C~C~~G~~G~~Ce 493 (503)
T 3v4v_B 479 GVCSCAPGRLGRLCE 493 (503)
T ss_dssp ---------------
T ss_pred CceECcCCCcCCCCC
Confidence 467899999999997
No 137
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=31.09 E-value=20 Score=18.28 Aligned_cols=16 Identities=25% Similarity=0.872 Sum_probs=11.0
Q ss_pred eeccCC---CceeCCCCCc
Q psy11501 115 SCHHVT---GECQCEPGFK 130 (133)
Q Consensus 115 ~C~~~~---g~C~C~~g~~ 130 (133)
.|.+.. .+|.|++||.
T Consensus 12 ~C~n~~~gs~~C~C~~Gy~ 30 (59)
T 2wph_E 12 FCKNSADNKVVCSCTEGYR 30 (59)
T ss_dssp EEEECSTTCEEEECCTTEE
T ss_pred EeEeCCCCCEEeeCCCCcE
Confidence 455543 3799999986
No 138
>1bx7_A Hirustasin; anti-coagulant, peptidic inhibitors, conformational flexibility, serine protease inhibitor; 1.20A {Hirudo medicinalis} SCOP: g.3.15.1 PDB: 1bx8_A 1hia_I
Probab=28.54 E-value=63 Score=16.28 Aligned_cols=40 Identities=33% Similarity=1.054 Sum_probs=23.5
Q ss_pred CCCCCCeecCCCCeeeCCCCcccCCCCCCCCCCccCC--CCCCCCCCC
Q psy11501 66 RCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQ--GCTVPCECF 111 (133)
Q Consensus 66 ~C~~~~~C~~~~~~C~C~~g~~g~~c~~~c~~g~~g~--~c~~~c~C~ 111 (133)
.|+....|. ..+|.|.. .+|...|+.||.-+ .|+.+|.|.
T Consensus 10 tcs~aq~c~--~~kcvC~~----~~Cri~Cp~GFk~DeNGCe~~C~Ca 51 (55)
T 1bx7_A 10 TCSAAQVCL--KGKCVCNE----VHCRIRCKYGLKKDENGCEYPCSCA 51 (55)
T ss_dssp CCCTTEEEE--TTEEEECC----CCCCCCCTTCBCCCTTSCCCSCCBC
T ss_pred ccChhhEEe--cCcEEeeh----hheEEeCCCcceECCCCCcceeeeC
Confidence 354544553 56677653 45666788888632 565555554
Done!