Your job contains 1 sequence.
>psy11502
MEKIHRETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVD
TDLHVSRSRRMIQAIRRRVFYNKLFLIMIIVIESMTLSVMLYLKIFKKR
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11502
(109 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-1148 - symbol:vti1b "vesicle transpo... 171 5.6e-13 1
UNIPROTKB|E1BUX5 - symbol:VTI1B "Uncharacterized protein"... 163 3.9e-12 1
MGI|MGI:1855688 - symbol:Vti1b "vesicle transport through... 154 3.5e-11 1
RGD|1560475 - symbol:RGD1560475 "similar to vesicle trans... 153 4.5e-11 1
UNIPROTKB|P58200 - symbol:Vti1b "Vesicle transport throug... 153 4.5e-11 1
UNIPROTKB|Q9UEU0 - symbol:VTI1B "Vesicle transport throug... 149 1.2e-10 1
UNIPROTKB|F1N1Z0 - symbol:VTI1B "Vesicle transport throug... 148 1.5e-10 1
UNIPROTKB|F1SA25 - symbol:VTI1B "Uncharacterized protein"... 147 2.0e-10 1
UNIPROTKB|Q2KIU0 - symbol:VTI1B "Vesicle transport throug... 142 7.7e-10 1
RGD|2323682 - symbol:LOC100359512 "vesicle transport thro... 132 1.2e-08 1
UNIPROTKB|J9NYA0 - symbol:VTI1B "Uncharacterized protein"... 126 6.0e-08 1
MGI|MGI:1855699 - symbol:Vti1a "vesicle transport through... 111 2.5e-06 1
FB|FBgn0260862 - symbol:Vti1 species:7227 "Drosophila mel... 106 1.1e-05 1
DICTYBASE|DDB_G0292974 - symbol:vti1A "v-SNARE family pro... 105 1.2e-05 1
UNIPROTKB|Q96AJ9 - symbol:VTI1A "Vesicle transport throug... 105 1.2e-05 1
RGD|621490 - symbol:Vti1a "vesicle transport through inte... 105 1.3e-05 1
UNIPROTKB|J9NRK3 - symbol:VTI1A "Uncharacterized protein"... 104 1.6e-05 1
WB|WBGene00013302 - symbol:vti-1 species:6239 "Caenorhabd... 101 3.8e-05 1
TAIR|locus:2175733 - symbol:SGR4 "SHOOT GRAVITROPSIM 4" s... 99 6.1e-05 1
TAIR|locus:2094662 - symbol:VTI13 "vesicle transport V-sn... 97 7.3e-05 1
SGD|S000004810 - symbol:VTI1 "Protein involved in cis-Gol... 98 7.7e-05 1
ASPGD|ASPL0000044157 - symbol:AN1973 species:162425 "Emer... 98 8.3e-05 1
POMBASE|SPBC3B9.10 - symbol:vti1 "SNARE Vti1 (predicted)"... 97 9.5e-05 1
ZFIN|ZDB-GENE-050809-135 - symbol:vti1a "vesicle transpor... 87 0.00097 1
>ZFIN|ZDB-GENE-040426-1148 [details] [associations]
symbol:vti1b "vesicle transport through
interaction with t-SNAREs homolog 1B (yeast)" species:7955 "Danio
rerio" [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192
SMART:SM00397 ZFIN:ZDB-GENE-040426-1148 GO:GO:0006886 GO:GO:0016020
GO:GO:0016192 GO:GO:0005622 SUPFAM:SSF47661 HOGENOM:HOG000116573
KO:K08493 GeneTree:ENSGT00530000063466 CTD:10490 HOVERGEN:HBG058837
OrthoDB:EOG4M399K OMA:MMSKLRT EMBL:BX470227 EMBL:BC055131
IPI:IPI00498607 RefSeq:NP_957330.1 UniGene:Dr.82463 SMR:Q7SY45
STRING:Q7SY45 Ensembl:ENSDART00000057379 GeneID:394011
KEGG:dre:394011 InParanoid:Q7SY45 NextBio:20814976 Uniprot:Q7SY45
Length = 225
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 40/103 (38%), Positives = 58/103 (56%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + ++L +SI RS++ A E + IGT +I ELG QRE L R RDRLV+T ++
Sbjct: 123 RALLIQGTESLNNASKSIERSQRIAAETDQIGTDIIEELGEQREQLDRTRDRLVNTGENL 182
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFKK 108
+ NKL L +II++E L ++YLK F+K
Sbjct: 183 SRSRKILRAMSRRIVTNKLLLSIIIIMEVAILGGVVYLKFFRK 225
>UNIPROTKB|E1BUX5 [details] [associations]
symbol:VTI1B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192 SMART:SM00397
GO:GO:0005794 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
SUPFAM:SSF47661 KO:K08493 GeneTree:ENSGT00530000063466 CTD:10490
OMA:MMSKLRT EMBL:AADN02003184 IPI:IPI00572560 RefSeq:XP_421192.1
Ensembl:ENSGALT00000015509 GeneID:423273 KEGG:gga:423273
NextBio:20825766 Uniprot:E1BUX5
Length = 232
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 38/104 (36%), Positives = 56/104 (53%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + ++L R +SI RS + A E + IGT +I ELG QRE L R + RLV+T ++
Sbjct: 129 RVLLLQGTESLNRASQSIERSHRIAAETDQIGTDIIEELGEQREQLERTKSRLVNTSENL 188
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFKKR 109
+ NKL L +II++E L ++Y K F+ R
Sbjct: 189 SKSRKILRSMSRRIATNKLLLSIIIILELAILGGVVYYKFFRSR 232
>MGI|MGI:1855688 [details] [associations]
symbol:Vti1b "vesicle transport through interaction with
t-SNAREs 1B" species:10090 "Mus musculus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005794 "Golgi apparatus"
evidence=ISO;IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
MGI:MGI:1855688 GO:GO:0016021 GO:GO:0005794 GO:GO:0048471
GO:GO:0006886 GO:GO:0016192 SUPFAM:SSF47661 PDB:1GL2 PDBsum:1GL2
HOGENOM:HOG000116573 eggNOG:NOG291765 HOVERGEN:HBG058837
OrthoDB:EOG4M399K ChiTaRS:VTI1B EMBL:AF035208 IPI:IPI00130115
UniGene:Mm.265929 PDB:2QYW PDBsum:2QYW ProteinModelPortal:O88384
SMR:O88384 DIP:DIP-32212N IntAct:O88384 STRING:O88384
PhosphoSite:O88384 PaxDb:O88384 PRIDE:O88384 InParanoid:O88384
EvolutionaryTrace:O88384 Genevestigator:O88384
GermOnline:ENSMUSG00000021124 Uniprot:O88384
Length = 232
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 37/102 (36%), Positives = 56/102 (54%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + ++L R +SI RS + A E + IGT +I ELG QR+ L R + RLV+T+ ++
Sbjct: 129 RALLLQGTESLNRATQSIERSHRIATETDQIGTEIIEELGEQRDQLERTKSRLVNTNENL 188
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFK 107
V NKL L +II++E L ++Y K F+
Sbjct: 189 SKSRKILRSMSRKVITNKLLLSVIILLELAILVGLVYYKFFR 230
>RGD|1560475 [details] [associations]
symbol:RGD1560475 "similar to vesicle transport through
interaction with t-SNAREs 1B homolog" species:10116 "Rattus
norvegicus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031201
"SNARE complex" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 RGD:1560475
GO:GO:0016021 GO:GO:0005794 GO:GO:0006886 GO:GO:0016192
GO:GO:0012505 GO:GO:0031201 SUPFAM:SSF47661 HOGENOM:HOG000116573
HOVERGEN:HBG058837 OrthoDB:EOG4M399K EMBL:AC111403 EMBL:BF413866
IPI:IPI00197618 ProteinModelPortal:P58200 SMR:P58200 STRING:P58200
PRIDE:P58200 eggNOG:NOG114817 InParanoid:P58200 ArrayExpress:P58200
Genevestigator:P58200 Uniprot:P58200
Length = 232
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 37/102 (36%), Positives = 56/102 (54%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + ++L R +SI RS + A E + IG+ +I ELG QR+ L R + RLV+T+ ++
Sbjct: 129 RALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLVNTNENL 188
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFK 107
V NKL L +IIV+E L ++Y K F+
Sbjct: 189 SKSRKILRSMSRKVITNKLLLSVIIVLELAILVGLVYYKFFR 230
>UNIPROTKB|P58200 [details] [associations]
symbol:Vti1b "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:10116 "Rattus norvegicus" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
RGD:1560475 GO:GO:0016021 GO:GO:0005794 GO:GO:0006886 GO:GO:0016192
GO:GO:0012505 GO:GO:0031201 SUPFAM:SSF47661 HOGENOM:HOG000116573
HOVERGEN:HBG058837 OrthoDB:EOG4M399K EMBL:AC111403 EMBL:BF413866
IPI:IPI00197618 ProteinModelPortal:P58200 SMR:P58200 STRING:P58200
PRIDE:P58200 eggNOG:NOG114817 InParanoid:P58200 ArrayExpress:P58200
Genevestigator:P58200 Uniprot:P58200
Length = 232
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 37/102 (36%), Positives = 56/102 (54%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + ++L R +SI RS + A E + IG+ +I ELG QR+ L R + RLV+T+ ++
Sbjct: 129 RALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLVNTNENL 188
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFK 107
V NKL L +IIV+E L ++Y K F+
Sbjct: 189 SKSRKILRSMSRKVITNKLLLSVIIVLELAILVGLVYYKFFR 230
>UNIPROTKB|Q9UEU0 [details] [associations]
symbol:VTI1B "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:9606 "Homo sapiens" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0012505 "endomembrane
system" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=TAS] [GO:0006904
"vesicle docking involved in exocytosis" evidence=TAS] [GO:0006944
"cellular membrane fusion" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0016021
GO:GO:0005794 GO:GO:0006886 GO:GO:0008283 GO:GO:0012505
GO:GO:0006944 GO:GO:0031201 GO:GO:0006904 PDB:2V8S PDBsum:2V8S
SUPFAM:SSF47661 HOGENOM:HOG000116573 KO:K08493 CTD:10490
eggNOG:NOG291765 HOVERGEN:HBG058837 OrthoDB:EOG4M399K EMBL:AF035824
EMBL:AF060902 EMBL:CR456757 EMBL:CR542095 EMBL:BT019348
EMBL:BC003142 IPI:IPI00063784 IPI:IPI00386818 RefSeq:NP_006361.1
UniGene:Hs.741177 ProteinModelPortal:Q9UEU0 SMR:Q9UEU0
IntAct:Q9UEU0 MINT:MINT-1429590 STRING:Q9UEU0 PhosphoSite:Q9UEU0
DMDM:126302613 PaxDb:Q9UEU0 PRIDE:Q9UEU0 DNASU:10490
Ensembl:ENST00000554659 GeneID:10490 KEGG:hsa:10490 UCSC:uc001xjt.3
GeneCards:GC14M068117 HGNC:HGNC:17793 MIM:603207 neXtProt:NX_Q9UEU0
PharmGKB:PA134861090 InParanoid:Q9UEU0 OMA:MMSKLRT PhylomeDB:Q9UEU0
ChiTaRS:VTI1B EvolutionaryTrace:Q9UEU0 GenomeRNAi:10490
NextBio:39804 ArrayExpress:Q9UEU0 Bgee:Q9UEU0 Genevestigator:Q9UEU0
GermOnline:ENSG00000100568 Uniprot:Q9UEU0
Length = 232
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 36/102 (35%), Positives = 55/102 (53%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + ++L R +SI RS + A E + IG+ +I ELG QR+ L R + RLV+T ++
Sbjct: 129 RAMLLQGTESLNRATQSIERSHRIATETDQIGSEIIEELGEQRDQLERTKSRLVNTSENL 188
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFK 107
V NKL L +II++E L ++Y K F+
Sbjct: 189 SKSRKILRSMSRKVTTNKLLLSIIILLELAILGGLVYYKFFR 230
>UNIPROTKB|F1N1Z0 [details] [associations]
symbol:VTI1B "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:9913 "Bos taurus" [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
GO:GO:0005794 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
SUPFAM:SSF47661 GeneTree:ENSGT00530000063466 IPI:IPI00708043
UniGene:Bt.2175 OMA:MMSKLRT EMBL:DAAA02029474
Ensembl:ENSBTAT00000002532 Uniprot:F1N1Z0
Length = 232
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 35/103 (33%), Positives = 55/103 (53%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + +L R +SI RS + A E + IG+ +I ELG QR+ L R + RLV+T ++
Sbjct: 129 RALLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLVNTSENL 188
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFKK 108
V NKL L ++I++E L ++Y K F++
Sbjct: 189 SKSRKILRSMSRKVTTNKLLLSIVILLELAILGGLVYYKFFRR 231
>UNIPROTKB|F1SA25 [details] [associations]
symbol:VTI1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0005794
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 SUPFAM:SSF47661
GeneTree:ENSGT00530000063466 OMA:MMSKLRT EMBL:CT868701
Ensembl:ENSSSCT00000002556 Uniprot:F1SA25
Length = 232
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 35/103 (33%), Positives = 55/103 (53%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + +L R +SI RS + A E + IG+ +I ELG QR+ L R + RLV+T ++
Sbjct: 129 RVLLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLVNTSENL 188
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFKK 108
V NKL L ++I++E L ++Y K F++
Sbjct: 189 SKSRKILRSMSRKVTTNKLLLSIVILLELAILGGLVYYKFFRR 231
>UNIPROTKB|Q2KIU0 [details] [associations]
symbol:VTI1B "Vesicle transport through interaction with
t-SNAREs homolog 1B" species:9913 "Bos taurus" [GO:0012505
"endomembrane system" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0016021
GO:GO:0006886 GO:GO:0016192 GO:GO:0012505 GO:GO:0005622
SUPFAM:SSF47661 HOGENOM:HOG000116573 KO:K08493 EMBL:BC112511
IPI:IPI00708043 RefSeq:NP_001073115.1 UniGene:Bt.2175
ProteinModelPortal:Q2KIU0 SMR:Q2KIU0 STRING:Q2KIU0 PRIDE:Q2KIU0
GeneID:780809 KEGG:bta:780809 CTD:10490 eggNOG:NOG291765
HOVERGEN:HBG058837 InParanoid:Q2KIU0 OrthoDB:EOG4M399K
NextBio:20924499 Uniprot:Q2KIU0
Length = 232
Score = 142 (55.0 bits), Expect = 7.7e-10, P = 7.7e-10
Identities = 34/103 (33%), Positives = 54/103 (52%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + +L R +SI RS + A E + IG+ +I ELG QR+ L R + RLV+T ++
Sbjct: 129 RALLLQGTDSLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLVNTSENL 188
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFKK 108
V NKL L ++I++E L ++Y K ++
Sbjct: 189 SKSRKILRSMSRKVTTNKLLLSIVILLELAILGGLVYYKFLRR 231
>RGD|2323682 [details] [associations]
symbol:LOC100359512 "vesicle transport through interaction with
t-SNAREs 1B-like" species:10116 "Rattus norvegicus" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 RGD:1560475
RGD:2323682 GO:GO:0005794 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
SUPFAM:SSF47661 GeneTree:ENSGT00530000063466 IPI:IPI00948301
Ensembl:ENSRNOT00000015814 ArrayExpress:F1LNC4 Uniprot:F1LNC4
Length = 231
Score = 132 (51.5 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 34/102 (33%), Positives = 52/102 (50%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + ++L R +SI RS + A E + IG+ +I ELG QR+ L R + RLV+T+ ++
Sbjct: 128 RALLLQGTESLNRATQSIERSHRIAAETDQIGSEIIEELGEQRDQLERTKSRLVNTNENL 187
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFK 107
N L IIV+E L ++Y K F+
Sbjct: 188 SKSRKILRSMSRNNLTNTLINYXIIVLELAILVGLVYYKFFR 229
>UNIPROTKB|J9NYA0 [details] [associations]
symbol:VTI1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 GO:GO:0005622
SUPFAM:SSF47661 GeneTree:ENSGT00530000063466 OMA:MMSKLRT
EMBL:AAEX03015851 Ensembl:ENSCAFT00000012309 Uniprot:J9NYA0
Length = 232
Score = 126 (49.4 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + +L R SI RS + A E + IG+ +I ELG Q + L R + RLV+T ++
Sbjct: 129 RALLLQGTDSLNRATRSIERSHRIATETDQIGSEIIEELGEQCDQLERTKSRLVNTSDNL 188
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFKK 108
V +K L ++I++E L ++Y K F K
Sbjct: 189 SKSRKILRSMSRKVTTSKQLLSIVILLELAILGGLVYYKFFHK 231
>MGI|MGI:1855699 [details] [associations]
symbol:Vti1a "vesicle transport through interaction with
t-SNAREs 1A" species:10090 "Mus musculus" [GO:0005484 "SNAP
receptor activity" evidence=ISO] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0008021 "synaptic
vesicle" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030136 "clathrin-coated vesicle"
evidence=ISO] [GO:0031201 "SNARE complex" evidence=ISO] [GO:0042147
"retrograde transport, endosome to Golgi" evidence=ISO] [GO:0043025
"neuronal cell body" evidence=ISO] [GO:0048280 "vesicle fusion with
Golgi apparatus" evidence=ISO] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
MGI:MGI:1855699 GO:GO:0016021 GO:GO:0006886 GO:GO:0000139
GO:GO:0043025 GO:GO:0008021 GO:GO:0006888 GO:GO:0031201
GO:GO:0042147 GO:GO:0048280 SUPFAM:SSF47661 eggNOG:NOG239679
HOGENOM:HOG000116573 KO:K08493 CTD:143187 HOVERGEN:HBG104027
OMA:YEQDFGT OrthoDB:EOG4V6ZHV EMBL:AF035823 EMBL:AF035209
EMBL:AK004751 EMBL:AK028646 EMBL:BC019386 IPI:IPI00131540
RefSeq:NP_058558.1 UniGene:Mm.258637 UniGene:Mm.451214 PDB:1VCS
PDBsum:1VCS ProteinModelPortal:O89116 SMR:O89116 IntAct:O89116
STRING:O89116 PhosphoSite:O89116 PaxDb:O89116 PRIDE:O89116
Ensembl:ENSMUST00000095950 GeneID:53611 KEGG:mmu:53611
UCSC:uc008hxx.1 GeneTree:ENSGT00530000063466
EvolutionaryTrace:O89116 NextBio:310323 Bgee:O89116
Genevestigator:O89116 GermOnline:ENSMUSG00000024983 Uniprot:O89116
Length = 217
Score = 111 (44.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 27/101 (26%), Positives = 49/101 (48%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + + L R+ + Q A+E E IG ++ L RE + RARDRL D D ++
Sbjct: 115 RAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARDRLRDADANL 174
Query: 66 XXXXXXXXXXXXXVFYNKLFLIM--IIVIESMTLSVMLYLK 104
+ N++ L++ IIV+ ++ ++ ++K
Sbjct: 175 GKSSRILTGMLRRIIQNRILLVILGIIVVIAILTAIAFFVK 215
>FB|FBgn0260862 [details] [associations]
symbol:Vti1 species:7227 "Drosophila melanogaster"
[GO:0005484 "SNAP receptor activity" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISS] [GO:0016192 "vesicle-mediated
transport" evidence=IEA;ISS] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 GO:GO:0006886 EMBL:AE014296 GO:GO:0016020
GO:GO:0016192 GO:GO:0005622 GO:GO:0005484 SUPFAM:SSF47661
eggNOG:NOG239679 KO:K08493 OMA:QYCELST GeneTree:ENSGT00530000063466
EMBL:AY058584 RefSeq:NP_612053.1 UniGene:Dm.20008 SMR:Q9W0N6
IntAct:Q9W0N6 MINT:MINT-921667 STRING:Q9W0N6
EnsemblMetazoa:FBtr0072607 GeneID:38085 KEGG:dme:Dmel_CG3279
UCSC:CG3279-RA CTD:38085 FlyBase:FBgn0260862 InParanoid:Q9W0N6
OrthoDB:EOG43FFD3 GenomeRNAi:38085 NextBio:806919 Uniprot:Q9W0N6
Length = 230
Score = 106 (42.4 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 28/98 (28%), Positives = 46/98 (46%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R+ L + ++ + RTG + + ALE E +G V+++L QRE L AR RL +T+ +
Sbjct: 121 RQRLLDNSERIERTGNRLTEGYRVALETEQLGAQVLNDLHHQRETLQGARARLRETNAEL 180
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYL 103
K+ L + V + + V LYL
Sbjct: 181 GRASRTLNTMMLRALREKVVLYGVGVCFVVAVGVSLYL 218
>DICTYBASE|DDB_G0292974 [details] [associations]
symbol:vti1A "v-SNARE family protein" species:44689
"Dictyostelium discoideum" [GO:0031201 "SNARE complex"
evidence=IDA] [GO:0000331 "contractile vacuole" evidence=IDA]
[GO:0032010 "phagolysosome" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;IDA] [GO:0010008
"endosome membrane" evidence=IEA;IDA] [GO:0006906 "vesicle fusion"
evidence=IDA] [GO:0005768 "endosome" evidence=IEA;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0016020 "membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0030665 "clathrin-coated vesicle membrane" evidence=IEA]
[GO:0030658 "transport vesicle membrane" evidence=IEA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192
dictyBase:DDB_G0292974 GO:GO:0016021 GO:GO:0006886
GenomeReviews:CM000155_GR GO:GO:0005789 EMBL:AAFI02000197
GO:GO:0010008 GO:GO:0032010 GO:GO:0000331 GO:GO:0030658
GO:GO:0030665 GO:GO:0031201 GO:GO:0006906 SUPFAM:SSF47661
eggNOG:NOG239679 KO:K08493 RefSeq:XP_629410.1
ProteinModelPortal:Q54CK6 IntAct:Q54CK6 STRING:Q54CK6 PRIDE:Q54CK6
EnsemblProtists:DDB0231536 GeneID:8628929 KEGG:ddi:DDB_G0292974
OMA:FERTEQN ProtClustDB:CLSZ2429346 Uniprot:Q54CK6
Length = 217
Score = 105 (42.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 25/99 (25%), Positives = 52/99 (52%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R+ L + + L T + ++R+ Q + ++E IG ++ +LG Q E + RD+L +TD +
Sbjct: 116 RQHLLQGSNMLDSTSDRLLRTHQISAQSEQIGQNILMDLGKQGEQIRGMRDKLHETDDQI 175
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLK 104
+ NK+ L +II++ +++++ LK
Sbjct: 176 KSARKIMTGIARRLATNKVILSIIILLLMGIIALIICLK 214
>UNIPROTKB|Q96AJ9 [details] [associations]
symbol:VTI1A "Vesicle transport through interaction with
t-SNAREs homolog 1A" species:9606 "Homo sapiens" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0016023 "cytoplasmic membrane-bounded vesicle"
evidence=IEA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IMP;IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0005484 "SNAP receptor activity" evidence=IDA] [GO:0031201
"SNARE complex" evidence=TAS] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0016021
GO:GO:0005794 GO:GO:0006886 GO:GO:0000139 GO:GO:0043025
EMBL:CH471066 GO:GO:0008021 GO:GO:0006888 GO:GO:0031201
GO:GO:0042147 GO:GO:0005484 GO:GO:0048280 SUPFAM:SSF47661
EMBL:AL158212 eggNOG:NOG239679 HOGENOM:HOG000116573 KO:K08493
EMBL:AK303646 EMBL:AL139120 EMBL:AC022018 EMBL:BC017052
IPI:IPI00059472 IPI:IPI00852968 RefSeq:NP_660207.2
UniGene:Hs.194554 ProteinModelPortal:Q96AJ9 SMR:Q96AJ9
IntAct:Q96AJ9 MINT:MINT-3050814 STRING:Q96AJ9 PhosphoSite:Q96AJ9
DMDM:29337113 PaxDb:Q96AJ9 PeptideAtlas:Q96AJ9 PRIDE:Q96AJ9
DNASU:143187 Ensembl:ENST00000393077 Ensembl:ENST00000432306
GeneID:143187 KEGG:hsa:143187 UCSC:uc001kzy.3 CTD:143187
GeneCards:GC10P114197 H-InvDB:HIX0023094 HGNC:HGNC:17792 MIM:614316
neXtProt:NX_Q96AJ9 PharmGKB:PA134928049 HOVERGEN:HBG104027
OMA:YEQDFGT OrthoDB:EOG4V6ZHV GenomeRNAi:143187 NextBio:84666
ArrayExpress:Q96AJ9 Bgee:Q96AJ9 CleanEx:HS_VTI1A
Genevestigator:Q96AJ9 GermOnline:ENSG00000151532 Uniprot:Q96AJ9
Length = 217
Score = 105 (42.0 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/100 (24%), Positives = 48/100 (48%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + + L R+ + Q A+E E IG ++ L RE + RAR+RL +TD ++
Sbjct: 115 RAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANL 174
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKI 105
+ N++ L+++ +I +T+ + + +
Sbjct: 175 GKSSRILTGMLRRIIQNRILLVILGIIVVITILMAITFSV 214
>RGD|621490 [details] [associations]
symbol:Vti1a "vesicle transport through interaction with t-SNAREs
1A" species:10116 "Rattus norvegicus" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0005484 "SNAP receptor activity" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IDA] [GO:0008021
"synaptic vesicle" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=IDA] [GO:0030672 "synaptic
vesicle membrane" evidence=IEA] [GO:0031201 "SNARE complex"
evidence=IDA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=ISO;ISS] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0048280 "vesicle fusion with Golgi apparatus" evidence=IDA]
InterPro:IPR000727 InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 SMART:SM00397 RGD:621490 GO:GO:0016021 GO:GO:0006886
GO:GO:0000139 GO:GO:0030054 GO:GO:0043025 GO:GO:0008021
GO:GO:0030672 GO:GO:0006888 GO:GO:0031201 GO:GO:0042147
GO:GO:0048280 SUPFAM:SSF47661 PDB:2NPS PDBsum:2NPS eggNOG:NOG239679
HOGENOM:HOG000116573 KO:K08493 CTD:143187 HOVERGEN:HBG104027
EMBL:AF262222 EMBL:AF262221 IPI:IPI00199945 IPI:IPI00324090
RefSeq:NP_075589.1 UniGene:Rn.154408 ProteinModelPortal:Q9JI51
SMR:Q9JI51 MINT:MINT-5225883 STRING:Q9JI51 PRIDE:Q9JI51
GeneID:65277 KEGG:rno:65277 UCSC:RGD:621490
EvolutionaryTrace:Q9JI51 NextBio:614244 ArrayExpress:Q9JI51
Genevestigator:Q9JI51 Uniprot:Q9JI51
Length = 224
Score = 105 (42.0 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/101 (24%), Positives = 50/101 (49%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + + L R+ + Q A+E E IG ++ L RE + RAR+RL +TD ++
Sbjct: 122 RAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDRERIQRARERLRETDANL 181
Query: 66 XXXXXXXXXXXXXVFYNKLFLIM--IIVIESMTLSVMLYLK 104
+ N++ L++ IIV+ ++ ++ +++
Sbjct: 182 GKSSRILTGMLRRIIQNRILLVILGIIVVITILTAITFFVR 222
>UNIPROTKB|J9NRK3 [details] [associations]
symbol:VTI1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 GO:GO:0005622
SUPFAM:SSF47661 KO:K08493 CTD:143187 OMA:YEQDFGT
GeneTree:ENSGT00530000063466 EMBL:AAEX03015533
RefSeq:XP_003433671.1 Ensembl:ENSCAFT00000050009 GeneID:100685447
KEGG:cfa:100685447 Uniprot:J9NRK3
Length = 217
Score = 104 (41.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 23/100 (23%), Positives = 48/100 (48%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + + L R+ + Q A+E E IG ++ L RE + RAR+RL +TD ++
Sbjct: 115 RAHLLDNTERLERSSRRLEAGYQIAVETEQIGQEMLENLSHDREKIQRARERLRETDANL 174
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKI 105
+ N++ ++++ +I +T+ + + +
Sbjct: 175 GKSSRVLTGMLRRIIQNRILVVILAIILVVTILMAITFSV 214
>WB|WBGene00013302 [details] [associations]
symbol:vti-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397 GO:GO:0006886
GO:GO:0016020 GO:GO:0016192 EMBL:Z99281 GO:GO:0005622
SUPFAM:SSF47661 eggNOG:NOG239679 HOGENOM:HOG000116573 KO:K08493
GeneTree:ENSGT00530000063466 PIR:T27217 RefSeq:NP_502781.1
ProteinModelPortal:O18230 SMR:O18230 STRING:O18230 PaxDb:O18230
EnsemblMetazoa:Y57G11C.4 GeneID:178397 KEGG:cel:CELE_Y57G11C.4
UCSC:Y57G11C.4 CTD:178397 WormBase:Y57G11C.4 InParanoid:O18230
OMA:FMFLYIV NextBio:900962 Uniprot:O18230
Length = 224
Score = 101 (40.6 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 5 HRET--LRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTD 62
HR+ L Q L R+ + + + A+E E IG ++S L QRE + R+RDRL ++
Sbjct: 122 HRQEDQLIANTQRLERSTRKVQDAHRIAVETEQIGAEMLSNLASQRETIGRSRDRLRQSN 181
Query: 63 LHVXXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKI 105
+ N+L L+++ + S ++Y I
Sbjct: 182 ADLGRANKTLSSMIRRAIQNRLLLLIVTFLLSFMFLYIVYKAI 224
>TAIR|locus:2175733 [details] [associations]
symbol:SGR4 "SHOOT GRAVITROPSIM 4" species:3702
"Arabidopsis thaliana" [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005770 "late endosome" evidence=IDA;TAS]
[GO:0005802 "trans-Golgi network" evidence=IDA;TAS] [GO:0006896
"Golgi to vacuole transport" evidence=IGI] [GO:0004872 "receptor
activity" evidence=TAS] [GO:0009630 "gravitropism" evidence=IMP]
[GO:0030140 "trans-Golgi network transport vesicle" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0000325 "plant-type
vacuole" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0006623 "protein targeting to vacuole"
evidence=RCA;IMP] [GO:0005829 "cytosol" evidence=RCA] [GO:0000902
"cell morphogenesis" evidence=RCA] [GO:0006605 "protein targeting"
evidence=RCA] [GO:0006816 "calcium ion transport" evidence=RCA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0007030
"Golgi organization" evidence=RCA] [GO:0007033 "vacuole
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] [GO:0016049 "cell growth" evidence=RCA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0016197 "endosomal
transport" evidence=RCA] [GO:0048193 "Golgi vesicle transport"
evidence=RCA] InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008
GO:GO:0016021 GO:GO:0005794 GO:GO:0005774 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0016192 GO:GO:0031902 GO:GO:0000325
GO:GO:0009630 GO:GO:0005770 GO:GO:0005802 EMBL:AB009054
GO:GO:0006623 SUPFAM:SSF47661 EMBL:AF114750 EMBL:AY070486
EMBL:AY091707 IPI:IPI00519170 RefSeq:NP_198767.1 UniGene:At.30339
UniGene:At.71131 ProteinModelPortal:Q9SEL6 SMR:Q9SEL6 IntAct:Q9SEL6
STRING:Q9SEL6 PaxDb:Q9SEL6 PRIDE:Q9SEL6 EnsemblPlants:AT5G39510.1
GeneID:833947 KEGG:ath:AT5G39510 GeneFarm:4299 TAIR:At5g39510
eggNOG:NOG239679 HOGENOM:HOG000116573 InParanoid:Q9SEL6 KO:K08493
OMA:LIMSTER PhylomeDB:Q9SEL6 ProtClustDB:CLSN2687331
Genevestigator:Q9SEL6 GermOnline:AT5G39510 Uniprot:Q9SEL6
Length = 221
Score = 99 (39.9 bits), Expect = 6.1e-05, P = 6.1e-05
Identities = 26/102 (25%), Positives = 48/102 (47%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + + L RT + + S + +E E IG ++ +L QR++L+RA + L D ++
Sbjct: 120 RARLMMSTERLGRTTDRVKDSRRTMMETEEIGVSILQDLHGQRQSLLRAHETLHGVDDNI 179
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFK 107
+ NK + II+ + ++LY K+ K
Sbjct: 180 GKSKKILTDMTRRMNKNKWTIGAIIIALIAAIFIILYFKLTK 221
>TAIR|locus:2094662 [details] [associations]
symbol:VTI13 "vesicle transport V-snare 13" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=IPI] [GO:0000149 "SNARE binding" evidence=TAS]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=TAS]
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 EMBL:CP002686
GO:GO:0006886 GO:GO:0016020 GO:GO:0016192 GO:GO:0005622
SUPFAM:SSF47661 HOGENOM:HOG000116573 KO:K08493
ProtClustDB:CLSN2687331 EMBL:BT029498 IPI:IPI00570404
RefSeq:NP_189554.2 UniGene:At.36973 ProteinModelPortal:A1A6H8
SMR:A1A6H8 STRING:A1A6H8 EnsemblPlants:AT3G29100.1 GeneID:822557
KEGG:ath:AT3G29100 OMA:MTRRMNR Genevestigator:A1A6H8 Uniprot:A1A6H8
Length = 195
Score = 97 (39.2 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 27/100 (27%), Positives = 46/100 (46%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + L RT + I S + LE E +G ++ +L QR++L+RA + L D +V
Sbjct: 94 RSRLMMSTDHLGRTTDRIKDSRRTILETEELGVSILQDLHGQRQSLLRAHETLHGVDDNV 153
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKI 105
+ NK + II + + + +LY K+
Sbjct: 154 GKSKKILTTMTRRMNRNKWTIGAIITVLVLAIIFILYFKL 193
>SGD|S000004810 [details] [associations]
symbol:VTI1 "Protein involved in cis-Golgi membrane traffic"
species:4932 "Saccharomyces cerevisiae" [GO:0005484 "SNAP receptor
activity" evidence=IDA] [GO:0006891 "intra-Golgi vesicle-mediated
transport" evidence=IMP] [GO:0006896 "Golgi to vacuole transport"
evidence=IMP] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IMP] [GO:0031201 "SNARE
complex" evidence=IPI] [GO:0030173 "integral to Golgi membrane"
evidence=IDA] [GO:0006906 "vesicle fusion" evidence=IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0031902 "late
endosome membrane" evidence=IEA] InterPro:IPR000727
InterPro:IPR007705 InterPro:IPR010989 Pfam:PF05008 PROSITE:PS50192
SMART:SM00397 SGD:S000004810 GO:GO:0006886 GO:GO:0031902
GO:GO:0030173 EMBL:BK006946 GO:GO:0006891 GO:GO:0006896
GO:GO:0031201 GO:GO:0005484 GO:GO:0006906 GO:GO:0042144 EMBL:Z47815
PDB:3ONL PDBsum:3ONL SUPFAM:SSF47661 eggNOG:NOG239679
HOGENOM:HOG000116573 KO:K08493 GeneTree:ENSGT00530000063466
OrthoDB:EOG44F9KK EMBL:AF006074 PIR:S50926 RefSeq:NP_013924.1
PDB:3ONJ PDBsum:3ONJ ProteinModelPortal:Q04338 SMR:Q04338
DIP:DIP-2145N IntAct:Q04338 MINT:MINT-545063 STRING:Q04338
PaxDb:Q04338 PeptideAtlas:Q04338 EnsemblFungi:YMR197C GeneID:855237
KEGG:sce:YMR197C OMA:MIRMAND NextBio:978783 Genevestigator:Q04338
GermOnline:YMR197C Uniprot:Q04338
Length = 217
Score = 98 (39.6 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 27/102 (26%), Positives = 47/102 (46%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R+ L + L ++G+ + + + A E E IG+ ++ +L QRE L AR L D +V
Sbjct: 117 RQQLLSNHAILQKSGDRLKDASRIANETEGIGSQIMMDLRSQRETLENARQTLFQADSYV 176
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLKIFK 107
+ NK II + + + ++L+ K FK
Sbjct: 177 DKSIKTLKTMTRRLVANKFISYAIIAVLILLILLVLFSK-FK 217
>ASPGD|ASPL0000044157 [details] [associations]
symbol:AN1973 species:162425 "Emericella nidulans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0030173 "integral to
Golgi membrane" evidence=IEA] [GO:0000324 "fungal-type vacuole"
evidence=IEA] [GO:0031201 "SNARE complex" evidence=IEA] [GO:0030428
"cell septum" evidence=IEA] [GO:0005484 "SNAP receptor activity"
evidence=IEA] [GO:0006896 "Golgi to vacuole transport"
evidence=IEA] [GO:0006906 "vesicle fusion" evidence=IEA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=IEA]
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IEA]
InterPro:IPR000727 InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 SMART:SM00397 GO:GO:0006886 GO:GO:0016192
EMBL:BN001307 GO:GO:0031201 GO:GO:0042144 SUPFAM:SSF47661
HOGENOM:HOG000116573 OMA:QYCELST EnsemblFungi:CADANIAT00008633
Uniprot:C8VL45
Length = 224
Score = 98 (39.6 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 25/99 (25%), Positives = 45/99 (45%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R+ L + L R+ + S++ ALE E IG V+++L QRE + L ++ +V
Sbjct: 124 RQQLLSGTERLERSSARLRESQRIALETEGIGANVLADLHQQRETITHTHGMLGQSESNV 183
Query: 66 XXXXXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLK 104
+ N+L I II + + + ++Y K
Sbjct: 184 DKSIKTLKGMARRMATNRLITIAIITVLILLIFAVIYSK 222
>POMBASE|SPBC3B9.10 [details] [associations]
symbol:vti1 "SNARE Vti1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0000324 "fungal-type vacuole"
evidence=IDA] [GO:0005484 "SNAP receptor activity" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=ISO] [GO:0006896 "Golgi to vacuole transport"
evidence=ISO] [GO:0030173 "integral to Golgi membrane"
evidence=ISO] [GO:0045324 "late endosome to vacuole transport"
evidence=ISO] [GO:0048278 "vesicle docking" evidence=IC]
InterPro:IPR000727 InterPro:IPR007705 InterPro:IPR010989
Pfam:PF05008 SMART:SM00397 PomBase:SPBC3B9.10 GO:GO:0006886
EMBL:CU329671 GO:GO:0030173 GenomeReviews:CU329671_GR GO:GO:0006891
GO:GO:0000324 GO:GO:0006896 GO:GO:0045324 GO:GO:0005484
GO:GO:0048278 SUPFAM:SSF47661 eggNOG:NOG239679 HOGENOM:HOG000116573
KO:K08493 EMBL:D89116 PIR:T40349 PIR:T42225 RefSeq:NP_596668.1
ProteinModelPortal:P78768 STRING:P78768 EnsemblFungi:SPBC3B9.10.1
GeneID:2540970 KEGG:spo:SPBC3B9.10 OMA:RKILSSM OrthoDB:EOG44F9KK
NextBio:20802085 Uniprot:P78768
Length = 214
Score = 97 (39.2 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 26/96 (27%), Positives = 47/96 (48%)
Query: 9 LRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHVXXX 68
L+ TN+ L ++ + ++ S++ A E E IG ++ +L QR L + + L DT H+
Sbjct: 118 LQGTNR-LEQSSQRLLESQRIANETEGIGASILRDLHGQRNQLEHSLEMLGDTSGHLDRS 176
Query: 69 XXXXXXXXXXVFYNKLFLIMIIVIESMTLSVMLYLK 104
+ N+ F II I + + ++LY K
Sbjct: 177 LRTLKTMARRLAMNRFFTTAIIAILVILILLVLYSK 212
>ZFIN|ZDB-GENE-050809-135 [details] [associations]
symbol:vti1a "vesicle transport through interaction
with t-SNAREs homolog 1A (yeast)" species:7955 "Danio rerio"
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR000727 InterPro:IPR007705
InterPro:IPR010989 Pfam:PF05008 SMART:SM00397
ZFIN:ZDB-GENE-050809-135 GO:GO:0006886 GO:GO:0016020 GO:GO:0016192
GO:GO:0005622 SUPFAM:SSF47661 eggNOG:NOG239679 HOGENOM:HOG000116573
KO:K08493 CTD:143187 HOVERGEN:HBG104027 OrthoDB:EOG4V6ZHV
EMBL:BC099994 IPI:IPI00510396 RefSeq:NP_001030152.1
UniGene:Dr.134790 ProteinModelPortal:Q499B4 SMR:Q499B4
STRING:Q499B4 GeneID:567385 KEGG:dre:567385 InParanoid:Q499B4
NextBio:20888649 Uniprot:Q499B4
Length = 191
Score = 87 (35.7 bits), Expect = 0.00097, P = 0.00097
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 6 RETLRETNQALVRTGESIVRSEQAALEAEAIGTGVISELGVQREALVRARDRLVDTDLHV 65
R L + + L R+ + Q A+E E +G +++ L RE + R+RDRL +TD ++
Sbjct: 115 RAHLLDNTERLERSSRRLEAGYQIAVETEQVGQEILANLHSDREKIQRSRDRLRETDANL 174
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.137 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 109 96 0.00091 102 3 10 22 0.43 29
29 0.43 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 484 (52 KB)
Total size of DFA: 101 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:09
No. of threads or processors used: 24
Search cpu time: 13.04u 0.07s 13.11t Elapsed: 00:00:10
Total cpu time: 13.04u 0.07s 13.11t Elapsed: 00:00:19
Start: Thu Aug 15 11:31:52 2013 End: Thu Aug 15 11:32:11 2013