Query psy11503
Match_columns 172
No_of_seqs 243 out of 1780
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 20:04:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11503.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11503hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fm0_E Molybdopterin convertin 100.0 7.7E-42 2.6E-46 267.3 12.4 114 49-167 30-143 (150)
2 2wp4_A Molybdopterin-convertin 100.0 1.7E-41 5.8E-46 264.6 11.7 110 50-164 37-146 (147)
3 2omd_A Molybdopterin-convertin 100.0 1.2E-41 4.2E-46 267.2 11.0 114 49-166 33-147 (154)
4 2q5w_E Molybdopterin-convertin 100.0 3E-41 1E-45 263.7 12.7 112 49-165 28-139 (149)
5 4ap8_A Molybdopterin synthase 100.0 5.7E-40 1.9E-44 252.7 11.4 103 49-152 33-135 (135)
6 3rpf_A Molybdopterin synthase 100.0 6E-38 2E-42 244.8 11.6 110 49-168 32-141 (148)
7 1fm0_E Molybdopterin convertin 99.8 1.2E-19 4.1E-24 141.6 4.1 56 1-60 85-140 (150)
8 2wp4_A Molybdopterin-convertin 99.8 2.2E-19 7.4E-24 139.7 4.9 55 1-59 91-145 (147)
9 2q5w_E Molybdopterin-convertin 99.8 2.2E-19 7.7E-24 139.9 4.6 57 1-61 83-139 (149)
10 2omd_A Molybdopterin-convertin 99.8 2.4E-19 8.1E-24 140.5 4.0 57 1-60 89-145 (154)
11 3rpf_A Molybdopterin synthase 99.7 3.8E-19 1.3E-23 138.5 4.1 57 1-61 82-138 (148)
12 4ap8_A Molybdopterin synthase 99.7 1.7E-18 5.8E-23 133.0 4.4 48 1-48 88-135 (135)
13 2id1_A Hypothetical protein; a 85.1 5.2 0.00018 29.7 8.2 73 80-161 5-78 (130)
14 2o5a_A BH1328 protein; BHR21, 84.6 5.4 0.00019 29.4 8.1 73 80-161 5-78 (125)
15 3ups_A Iojap-like protein; PSI 73.5 25 0.00085 26.2 8.7 74 79-161 20-94 (136)
16 2lxf_A Uncharacterized protein 32.7 68 0.0023 23.2 4.8 40 54-100 63-102 (121)
17 1ulr_A Putative acylphosphatas 31.9 77 0.0026 21.2 4.7 42 54-102 31-72 (88)
18 4ffl_A PYLC; amino acid, biosy 29.3 58 0.002 26.5 4.4 32 110-141 327-358 (363)
19 3sr3_A Microcin immunity prote 27.5 43 0.0015 28.1 3.3 34 107-140 9-42 (336)
20 1urr_A CG18505 protein; acylph 27.1 1.1E+02 0.0039 20.9 5.0 43 54-102 40-82 (102)
21 2vh7_A Acylphosphatase-1; hydr 26.8 1.1E+02 0.0037 20.9 4.8 41 54-100 37-77 (99)
22 2k9u_B Filamin-binding LIM pro 26.7 24 0.00082 19.0 1.0 15 9-23 11-25 (26)
23 2od6_A Hypothetical protein; m 26.5 10 0.00034 26.5 -0.7 23 131-153 21-43 (110)
24 3tla_A MCCF; serine protease, 26.0 51 0.0017 28.2 3.5 34 107-140 39-72 (371)
25 2fhm_A Probable acylphosphatas 25.2 1.6E+02 0.0053 19.7 5.3 41 54-101 31-71 (91)
26 2ipr_A Large T antigen; DNA bi 25.0 2.1E+02 0.0073 21.2 6.8 52 67-129 32-83 (133)
27 2zqe_A MUTS2 protein; alpha/be 24.8 70 0.0024 21.3 3.4 30 76-107 15-44 (83)
28 2gv1_A Probable acylphosphatas 24.6 1.1E+02 0.0037 20.6 4.4 42 54-102 33-75 (92)
29 4h1h_A LMO1638 protein; MCCF-l 24.4 42 0.0014 27.9 2.7 34 107-140 8-41 (327)
30 1w2i_A Acylphosphatase; hydrol 23.6 81 0.0028 21.3 3.6 42 54-102 33-74 (91)
31 2bjd_A Acylphosphatase; hypert 23.6 99 0.0034 21.3 4.1 43 53-102 42-84 (101)
32 1j27_A Hypothetical protein TT 23.4 1.9E+02 0.0066 20.1 8.1 60 79-143 23-83 (102)
33 3trg_A Acylphosphatase; fatty 20.2 1E+02 0.0035 21.1 3.6 41 54-101 41-81 (98)
No 1
>1fm0_E Molybdopterin convertin factor, subunit 2; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.41.5.1 PDB: 1fma_E 1nvi_E 3bii_E 1nvj_A
Probab=100.00 E-value=7.7e-42 Score=267.32 Aligned_cols=114 Identities=29% Similarity=0.481 Sum_probs=101.7
Q ss_pred CccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHH
Q psy11503 49 GTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTAL 128 (172)
Q Consensus 49 G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af 128 (172)
+..+|.|+||+.++|++|.+|+||+|++||++.|++|+++++++|| +.++.|+||+|.|+|||+||+|+|+|+||++||
T Consensus 30 Avv~F~G~VR~~~~g~~V~~L~ye~Y~~ma~~~l~~I~~ea~~r~~-~~~v~v~HR~G~l~vGe~~v~VaVss~HR~~Af 108 (150)
T 1fm0_E 30 AVVTFTGKVRNHNLGDSVNALTLEHYPGMTEKALAEIVDEARNRWP-LGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAF 108 (150)
T ss_dssp EEEEEEEECC-------CCCEEEEECHHHHHHHHHHHHHHHHHHSC-EEEEEEEEECEEECTTCEEEEEEEEESSHHHHH
T ss_pred eEEEEEEEECCCCCCCcEeEEEEEecchHHHHHHHHHHHHHHHhCC-CceEEEEEEEcccCCCCEEEEEEEEcCcHHHHH
Confidence 3456889999999999999999999999999999999999999996 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhCcceeeeecCCCcccccccccccccc
Q psy11503 129 SAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECM 167 (172)
Q Consensus 129 ~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~~~~ 167 (172)
+||+++||+||+++||||||+|.||+ .|+++++++
T Consensus 109 ~A~~~~iD~lK~~aPiWKkE~~~dG~----~Wv~~~~~d 143 (150)
T 1fm0_E 109 EAGQFIMDYLKTRAPFWKREATPEGD----RWVEARESD 143 (150)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEETTEE----EECCCCHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEEcCCCC----EecCCCcCc
Confidence 99999999999999999999999997 899887654
No 2
>2wp4_A Molybdopterin-converting factor subunit 2 1; transferase; 2.49A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-41 Score=264.60 Aligned_cols=110 Identities=32% Similarity=0.493 Sum_probs=91.6
Q ss_pred ccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHH
Q psy11503 50 THTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALS 129 (172)
Q Consensus 50 ~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~ 129 (172)
..+|.|+||+..+|++|.+|+||+|++||++.|++|+++++++|| +.++.|+||+|.|+|||+||+|+|+|+||++||+
T Consensus 37 vv~F~G~VR~~~~g~~V~~Leye~y~~ma~~~l~~I~~ea~~r~~-~~~v~i~HR~G~l~vGe~~v~VaVss~HR~~Af~ 115 (147)
T 2wp4_A 37 IVIFVGNVRDHNAGHDVTRLFYEAYPPMVIRTLMSIIGRCEDKAE-GVRVAVAHRTGELQIGDAAVVIGASAPHRAEAFD 115 (147)
T ss_dssp EEEEEEECCC-------CEEEEECCHHHHHHHHHHHHHHHHTSST-TCEEEEEEECEEECTTCEEEEEEEEESSHHHHHH
T ss_pred EEEEEEEECCCCCCCcEEEEEEEeCchHHHHHHHHHHHHHHHhCC-CceEEEEEEEcccCCCCeEEEEEEeccCHHHHHH
Confidence 445889999999999999999999999999999999999999997 9999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhCcceeeeecCCCccccccccccc
Q psy11503 130 AVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS 164 (172)
Q Consensus 130 A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~ 164 (172)
||+++||+||+++||||||+|.||+ .|+++.
T Consensus 116 A~~~~iD~lK~~aPiWKkE~~~dG~----~Wv~~~ 146 (147)
T 2wp4_A 116 AARMCIELLKQEVPIWKKEFSSTGA----EWVGDR 146 (147)
T ss_dssp HHHHHHHHHHHHCCCEEEEECC-------------
T ss_pred HHHHHHHHHHhhCCEEEEEEeCCCC----EEeCCC
Confidence 9999999999999999999999997 899864
No 3
>2omd_A Molybdopterin-converting factor subunit 2; MOAE, coenzyme biosynthesis, structural genomics, NPPSFA; 2.00A {Aquifex aeolicus}
Probab=100.00 E-value=1.2e-41 Score=267.18 Aligned_cols=114 Identities=29% Similarity=0.434 Sum_probs=98.6
Q ss_pred Cccccccccccccccc-eeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHH
Q psy11503 49 GTHTDAQWKENSECMW-RVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTA 127 (172)
Q Consensus 49 G~~~~~~wv~nse~G~-~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~a 127 (172)
+..+|.|+||+.++|+ +|.+|+||+|++||++.|++|+++++++|| |.++.|+||+|.|+|||+||+|+|+|+||++|
T Consensus 33 Avv~F~G~VR~~~~g~~~V~~Leye~y~~mae~~l~~I~~ea~~r~~-l~~v~v~HR~G~l~vGe~iv~VaVss~HR~~A 111 (154)
T 2omd_A 33 AQVLFLGIPRNAPEDGGNIEALEYEAYPEMAIKEMEKIRQETIEKFG-VKEVFIHHRLGLVKIGEPSFLVLAVGGHREET 111 (154)
T ss_dssp EEEEEEECCCCCGGGTSCEEEEEEEECHHHHHHHHHHHHHHHHHHHC-CSEEEEEEECEEEETTSCCEEEEEEESSHHHH
T ss_pred EEEEEEEEECCCCCCcccEEEEEEEeCchHHHHHHHHHHHHHHHhCC-CceEEEEEEEcccCCCCeEEEEEEeccCHHHH
Confidence 3456889999999999 999999999999999999999999999996 99999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhCcceeeeecCCCccccccccccccc
Q psy11503 128 LSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSEC 166 (172)
Q Consensus 128 f~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~~~ 166 (172)
|+||+++||+||+++||||||++.||+ +.|+++++.
T Consensus 112 f~A~~~~iD~lK~~aPiWKkE~~~dG~---~~Wv~~~~~ 147 (154)
T 2omd_A 112 FKACRYAVDETKKRVPIWKKEIFKEGK---GEWVLGEKK 147 (154)
T ss_dssp HHHHHHHHHHHHHHSCEEEEEEEC---------------
T ss_pred HHHHHHHHHHHHhhCCEEEEEEeCCCC---ceecCCCCC
Confidence 999999999999999999999999996 589988754
No 4
>2q5w_E Molybdopterin-converting factor subunit 2; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_A*
Probab=100.00 E-value=3e-41 Score=263.68 Aligned_cols=112 Identities=36% Similarity=0.593 Sum_probs=105.7
Q ss_pred CccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHH
Q psy11503 49 GTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTAL 128 (172)
Q Consensus 49 G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af 128 (172)
+..+|.|+||+..+|++|.+|+||+|++||++.|++|+++++++|| +.++.|+||+|.|+|||+||+|+|+|+||++||
T Consensus 28 Avv~F~G~VR~~~~g~~V~~L~ye~y~~ma~~~l~~I~~ea~~r~~-~~~v~v~HR~G~l~vGe~~v~VaVss~HR~~Af 106 (149)
T 2q5w_E 28 AVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWP-GTITSIVHRIGPLQISDIAVLIAVSSPHRKDAY 106 (149)
T ss_dssp EEEEEEEECCSCSSSSCEEEEEEEECHHHHHHHHHHHHHHHHHHST-TCEEEEEEECEEECTTCEEEEEEEEESSHHHHH
T ss_pred EEEEEEEEECCCCCCCcEEEEEEEeCchHHHHHHHHHHHHHHHhCC-CcEEEEEEEEcccCCCCeEEEEEEEcccHHHHH
Confidence 3445889999999999999999999999999999999999999997 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhCcceeeeecCCCcccccccccccc
Q psy11503 129 SAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 165 (172)
Q Consensus 129 ~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~~ 165 (172)
+||+++||+||+++||||||+|.||+ .|+++..
T Consensus 107 ~A~~~~iD~lK~~aPiWKkE~~~dG~----~Wv~~~~ 139 (149)
T 2q5w_E 107 RANEYAIERIKEIVPIWKKEIWEDGS----KWQGHQK 139 (149)
T ss_dssp HHHHHHHHHHHHHCCEEEEEEETTEE----EECCC--
T ss_pred HHHHHHHHHHHhhCCEEEEEEcCCCC----EEecCCC
Confidence 99999999999999999999999997 8998754
No 5
>4ap8_A Molybdopterin synthase catalytic subunit; transferase; 2.78A {Homo sapiens}
Probab=100.00 E-value=5.7e-40 Score=252.69 Aligned_cols=103 Identities=46% Similarity=0.736 Sum_probs=98.7
Q ss_pred CccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHH
Q psy11503 49 GTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTAL 128 (172)
Q Consensus 49 G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af 128 (172)
+..+|.|+||+..+|++|.+|+||+|++||++.|++|+++++++|| +.++.|+||+|.|+|||+||+|+|+|+||++||
T Consensus 33 Avv~F~G~VR~~~~g~~V~~L~ye~y~~ma~~~l~~I~~ea~~r~~-l~~v~i~HR~G~l~~ge~~v~Vav~s~HR~~Af 111 (135)
T 4ap8_A 33 AISLFVGTTRNNFEGKKVISLEYEAYLPMAENEVRKICSDIRQKWP-VKHIAVFHRLGLVPVSEASIIIAVSSAHRAASL 111 (135)
T ss_dssp EEEEEEEECCSEETTEEEEEEEEEEEETHHHHHHHHHHHHHHHHSC-EEEEEEEEECEEEETTSEEEEEEEEESSHHHHH
T ss_pred eEEEEEEEECCCCCCCcEEEEEEEecchHHHHHHHHHHHHHHHhcC-CcceeehhhcccccCCCeEEEEEEEccCHHHHH
Confidence 3455889999999999999999999999999999999999999997 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhCcceeeeecCC
Q psy11503 129 SAVEHAINKLKEMAPIWKKEEYAP 152 (172)
Q Consensus 129 ~A~~~~id~lK~~vpiWKkE~~~d 152 (172)
+||+|+||+||+++||||||+|+|
T Consensus 112 ~A~~~~id~lK~~~PiWKkE~~~D 135 (135)
T 4ap8_A 112 EAVSYAIDTLKAKVPIWKKEIYEE 135 (135)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEEC-
T ss_pred HHHHHHHHHHhhcCCceeceeccC
Confidence 999999999999999999999986
No 6
>3rpf_A Molybdopterin synthase catalytic subunit; MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=100.00 E-value=6e-38 Score=244.76 Aligned_cols=110 Identities=17% Similarity=0.292 Sum_probs=101.3
Q ss_pred CccccccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHH
Q psy11503 49 GTHTDAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTAL 128 (172)
Q Consensus 49 G~~~~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af 128 (172)
+..+|.|+||+.+ .|++|+||+|++||++.|++|+++++++| + ++.|+||+|.|+|||++|+|+|+|+||++||
T Consensus 32 Avv~F~G~VR~~~---~V~~L~ye~y~~ma~~~l~~I~~ea~~~~--~-~v~i~HR~G~l~~Ge~~v~VaVss~HR~~Af 105 (148)
T 3rpf_A 32 AFCVFVGIVRKED---NIQGLSFDIYEALLKTWFEKWHHKAKDLG--V-VLKMAHSLGDVLIGQSSFLCVSMGKNRKNAL 105 (148)
T ss_dssp EEEEEEEECCCCT---TCCEEEEEECHHHHHHHHHHHHHHHHHTT--E-EEEEEEEEEEEETTCEEEEEEEEESSHHHHH
T ss_pred EEEEEEEEEECCC---CEeEEEEEcCHHHHHHHHHHHHHHHhhcC--C-EEEEEEEEcccCCCCEEEEEEEEcccHHHHH
Confidence 3456889999862 49999999999999999999999999975 5 8999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhCcceeeeecCCCccccccccccccccc
Q psy11503 129 SAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSECMW 168 (172)
Q Consensus 129 ~A~~~~id~lK~~vpiWKkE~~~dg~~~~~~W~~~~~~~~ 168 (172)
+||+++||+||+++||||||++.||+ .|+.+.+..-
T Consensus 106 ~A~~~~id~lK~~~PiWKkE~~~~g~----~Wv~~r~~~~ 141 (148)
T 3rpf_A 106 ELYENFIEDFKHNAPIWKYDLIHNKR----IYAKERSHPL 141 (148)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEETTEE----EECGGGCBCC
T ss_pred HHHHHHHHHHHhcCCEEEEEEeCCCc----EEecCCcccc
Confidence 99999999999999999999998886 9999987653
No 7
>1fm0_E Molybdopterin convertin factor, subunit 2; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.41.5.1 PDB: 1fma_E 1nvi_E 3bii_E 1nvj_A
Probab=99.77 E-value=1.2e-19 Score=141.56 Aligned_cols=56 Identities=30% Similarity=0.608 Sum_probs=53.4
Q ss_pred CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCccccccccccc
Q psy11503 1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS 60 (172)
Q Consensus 1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~ns 60 (172)
+|.|+|||+||+|+|+|+||++||+||+++||+||+++||||||.+.+|. .||.+.
T Consensus 85 ~G~l~vGe~~v~VaVss~HR~~Af~A~~~~iD~lK~~aPiWKkE~~~dG~----~Wv~~~ 140 (150)
T 1fm0_E 85 IGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGD----RWVEAR 140 (150)
T ss_dssp CEEECTTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEETTEE----EECCCC
T ss_pred EcccCCCCEEEEEEEEcCcHHHHHHHHHHHHHHHHhcCCEEEEEEcCCCC----EecCCC
Confidence 69999999999999999999999999999999999999999999999996 799764
No 8
>2wp4_A Molybdopterin-converting factor subunit 2 1; transferase; 2.49A {Mycobacterium tuberculosis}
Probab=99.76 E-value=2.2e-19 Score=139.71 Aligned_cols=55 Identities=40% Similarity=0.728 Sum_probs=46.4
Q ss_pred CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCcccccccccc
Q psy11503 1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKEN 59 (172)
Q Consensus 1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~n 59 (172)
+|.|++||+||+|+|+|+||++||+||+++||+||+++||||||.+.+|. .||.+
T Consensus 91 ~G~l~vGe~~v~VaVss~HR~~Af~A~~~~iD~lK~~aPiWKkE~~~dG~----~Wv~~ 145 (147)
T 2wp4_A 91 TGELQIGDAAVVIGASAPHRAEAFDAARMCIELLKQEVPIWKKEFSSTGA----EWVGD 145 (147)
T ss_dssp CEEECTTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHCCCEEEEECC------------
T ss_pred EcccCCCCeEEEEEEeccCHHHHHHHHHHHHHHHHhhCCEEEEEEeCCCC----EEeCC
Confidence 69999999999999999999999999999999999999999999999996 79875
No 9
>2q5w_E Molybdopterin-converting factor subunit 2; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_A*
Probab=99.76 E-value=2.2e-19 Score=139.91 Aligned_cols=57 Identities=44% Similarity=0.859 Sum_probs=53.1
Q ss_pred CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCcccccccccccc
Q psy11503 1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 61 (172)
Q Consensus 1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~nse 61 (172)
+|.|+|||+||+|+|+|+||++||+||+++||+||+++||||||.+.+|. .||.+..
T Consensus 83 ~G~l~vGe~~v~VaVss~HR~~Af~A~~~~iD~lK~~aPiWKkE~~~dG~----~Wv~~~~ 139 (149)
T 2q5w_E 83 IGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGS----KWQGHQK 139 (149)
T ss_dssp CEEECTTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHCCEEEEEEETTEE----EECCC--
T ss_pred EcccCCCCeEEEEEEEcccHHHHHHHHHHHHHHHHhhCCEEEEEEcCCCC----EEecCCC
Confidence 69999999999999999999999999999999999999999999999996 7998643
No 10
>2omd_A Molybdopterin-converting factor subunit 2; MOAE, coenzyme biosynthesis, structural genomics, NPPSFA; 2.00A {Aquifex aeolicus}
Probab=99.76 E-value=2.4e-19 Score=140.47 Aligned_cols=57 Identities=32% Similarity=0.594 Sum_probs=46.4
Q ss_pred CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCccccccccccc
Q psy11503 1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENS 60 (172)
Q Consensus 1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~ns 60 (172)
+|.|+|||+||+|+|+|+||++||+||+++||+||+++||||||.+.+|+. .||.+.
T Consensus 89 ~G~l~vGe~iv~VaVss~HR~~Af~A~~~~iD~lK~~aPiWKkE~~~dG~~---~Wv~~~ 145 (154)
T 2omd_A 89 LGLVKIGEPSFLVLAVGGHREETFKACRYAVDETKKRVPIWKKEIFKEGKG---EWVLGE 145 (154)
T ss_dssp CEEEETTSCCEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEEC-------------
T ss_pred EcccCCCCeEEEEEEeccCHHHHHHHHHHHHHHHHhhCCEEEEEEeCCCCc---eecCCC
Confidence 699999999999999999999999999999999999999999999999942 799764
No 11
>3rpf_A Molybdopterin synthase catalytic subunit; MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=99.75 E-value=3.8e-19 Score=138.48 Aligned_cols=57 Identities=26% Similarity=0.427 Sum_probs=53.7
Q ss_pred CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCCCcccccccccccc
Q psy11503 1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAPGTHTDAQWKENSE 61 (172)
Q Consensus 1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~G~~~~~~wv~nse 61 (172)
+|.|+|||++|+|+|+|+||++||+||+++||+||+++||||||.+.+|. .|+.+++
T Consensus 82 ~G~l~~Ge~~v~VaVss~HR~~Af~A~~~~id~lK~~~PiWKkE~~~~g~----~Wv~~r~ 138 (148)
T 3rpf_A 82 LGDVLIGQSSFLCVSMGKNRKNALELYENFIEDFKHNAPIWKYDLIHNKR----IYAKERS 138 (148)
T ss_dssp EEEEETTCEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEETTEE----EECGGGC
T ss_pred EcccCCCCEEEEEEEEcccHHHHHHHHHHHHHHHHhcCCEEEEEEeCCCc----EEecCCc
Confidence 59999999999999999999999999999999999999999999998886 7998754
No 12
>4ap8_A Molybdopterin synthase catalytic subunit; transferase; 2.78A {Homo sapiens}
Probab=99.73 E-value=1.7e-18 Score=132.98 Aligned_cols=48 Identities=60% Similarity=0.888 Sum_probs=45.8
Q ss_pred CCcccCCCcEEEEEEeCCChHHHHHHHHHHHHHhhhcCCcccccccCC
Q psy11503 1 LGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEMAPIWKKEEYAP 48 (172)
Q Consensus 1 ~G~~~~ge~~v~v~v~s~hR~~af~a~~~lId~lK~~~PIwKke~~~~ 48 (172)
+|.|+|||+||+|+|+|+||++||+||+++||.||+++||||||.|.|
T Consensus 88 ~G~l~~ge~~v~Vav~s~HR~~Af~A~~~~id~lK~~~PiWKkE~~~D 135 (135)
T 4ap8_A 88 LGLVPVSEASIIIAVSSAHRAASLEAVSYAIDTLKAKVPIWKKEIYEE 135 (135)
T ss_dssp CEEEETTSEEEEEEEEESSHHHHHHHHHHHHHHHHHHSCEEEEEEEC-
T ss_pred cccccCCCeEEEEEEEccCHHHHHHHHHHHHHHHhhcCCceeceeccC
Confidence 699999999999999999999999999999999999999999999864
No 13
>2id1_A Hypothetical protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 3.00A {Chromobacterium violaceum} SCOP: d.218.1.12
Probab=85.10 E-value=5.2 Score=29.75 Aligned_cols=73 Identities=14% Similarity=0.104 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHHHHHHHHHHHhhh-CcceeeeecCCCccccc
Q psy11503 80 KVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEM-APIWKKEEYAPGTHTDA 158 (172)
Q Consensus 80 ~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~A~~~~id~lK~~-vpiWKkE~~~dg~~~~~ 158 (172)
+.++.|++-+..+- -.+|.+.---|.....| .||.++|......-..+..+.+.+|.. .+..+.|=..+ +
T Consensus 5 ~l~~~i~~al~dkK--a~DI~vlDv~~~s~~~D--yfVIaTg~S~rqv~Aiad~v~~~lk~~g~~~~~~EG~~~-----~ 75 (130)
T 2id1_A 5 EISKLAIEALEDIK--GKDIIELDTSKLTSLFQ--RMIVATGDSNRQVKALANSVQVKLKEAGVDIVGSEGHES-----G 75 (130)
T ss_dssp HHHHHHHHHHHHTT--CEEEEEEEGGGTCSSCS--EEEEEECSSHHHHHHHHHHHHHHHHHTTCCCCBCCSTTT-----S
T ss_pred HHHHHHHHHHHHcC--CCCeEEEEcCCCCcccC--EEEEEEcCCHHHHHHHHHHHHHHHHHcCCcCccccCCCC-----C
Confidence 33444544455553 58899998889888888 677888888888999999999999864 22335553333 4
Q ss_pred ccc
Q psy11503 159 QWK 161 (172)
Q Consensus 159 ~W~ 161 (172)
.|+
T Consensus 76 ~Wv 78 (130)
T 2id1_A 76 EWV 78 (130)
T ss_dssp SEE
T ss_pred CEE
Confidence 586
No 14
>2o5a_A BH1328 protein; BHR21, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.70A {Bacillus halodurans} SCOP: d.218.1.12
Probab=84.56 E-value=5.4 Score=29.42 Aligned_cols=73 Identities=11% Similarity=0.170 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHHHHHHHHHHHhhh-CcceeeeecCCCccccc
Q psy11503 80 KVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEM-APIWKKEEYAPGTHTDA 158 (172)
Q Consensus 80 ~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~A~~~~id~lK~~-vpiWKkE~~~dg~~~~~ 158 (172)
+.++.|++-+..+- -.++.+.---|.....| .||.++|......-..+..+.+.+|.. .+..+.|-..+|
T Consensus 5 ~l~~~i~~al~dkK--a~DI~vlDv~~~s~~~D--yfVIatg~S~rqv~Aiad~v~~~lk~~g~~~~~~EG~~~~----- 75 (125)
T 2o5a_A 5 ELLQLAVNAVDDKK--AEQVVALNMKGISLIAD--FFLICHGNSEKQVQAIAHELKKVAQEQGIEIKRLEGYEQA----- 75 (125)
T ss_dssp HHHHHHHHHHHHTT--CEEEEEEECBTTBC--C--EEEEEEESSHHHHHHHHHHHHHHHHHTTCCCCEEESTTTT-----
T ss_pred HHHHHHHHHHHHcC--CCCeEEEEcCCCCcccC--EEEEEEcCCHHHHHHHHHHHHHHHHHcCCccccccCCCCC-----
Confidence 33444555555553 58898988888888887 577777888888888999999999874 233466644444
Q ss_pred ccc
Q psy11503 159 QWK 161 (172)
Q Consensus 159 ~W~ 161 (172)
.|+
T Consensus 76 ~Wv 78 (125)
T 2o5a_A 76 RWV 78 (125)
T ss_dssp SEE
T ss_pred CEE
Confidence 586
No 15
>3ups_A Iojap-like protein; PSI-biology, MCSG, midwest center for structural genomics, U function, structural genomics; HET: MSE; 1.75A {Zymomonas mobilis subsp}
Probab=73.51 E-value=25 Score=26.20 Aligned_cols=74 Identities=12% Similarity=0.239 Sum_probs=51.1
Q ss_pred HHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHHHHHHHHHHHhhh-CcceeeeecCCCcccc
Q psy11503 79 LKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALSAVEHAINKLKEM-APIWKKEEYAPGTHTD 157 (172)
Q Consensus 79 ~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~A~~~~id~lK~~-vpiWKkE~~~dg~~~~ 157 (172)
++.++.|++-+..+- ..+|.+.---|.....|- ||.++|......-..+..+.+.+|.. .+....|-+.+|
T Consensus 20 ~~l~~~i~~al~dkK--a~DI~vlDv~~~s~~~Dy--fVIatg~S~rqv~Aiad~v~~~lk~~g~~~~~~EG~~~~---- 91 (136)
T 3ups_A 20 EMLLKLVTDSLDDDQ--ALEIATIPLAGKSSIADY--MVIASGRSSRQVTAMAQKLADRIKAATGYVSKIEGLPAA---- 91 (136)
T ss_dssp HHHHHHHHHHHHHTT--CEEEEEEECTTTCSSCSE--EEEEECSSHHHHHHHHHHHHHHHHHHHCCCCEEESCSSC----
T ss_pred HHHHHHHHHHHHHcC--CCCeEEEECCCCCcccCE--EEEEEcCCHHHHHHHHHHHHHHHHHcCCccCcccCCCCC----
Confidence 444555555555553 588988888888777765 56667777777888889999999864 344477755444
Q ss_pred cccc
Q psy11503 158 AQWK 161 (172)
Q Consensus 158 ~~W~ 161 (172)
.|+
T Consensus 92 -~Wv 94 (136)
T 3ups_A 92 -DWV 94 (136)
T ss_dssp -SEE
T ss_pred -CEE
Confidence 596
No 16
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=32.70 E-value=68 Score=23.22 Aligned_cols=40 Identities=15% Similarity=-0.008 Sum_probs=24.6
Q ss_pred ccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEE
Q psy11503 54 AQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVA 100 (172)
Q Consensus 54 ~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~ 100 (172)
.|||+|..+|. |+ +..+-. .+.|++.++.+++-.| ...|.
T Consensus 63 ~G~VrN~~dG~-Ve-i~~eG~----~~~v~~f~~~l~~gPp-~A~V~ 102 (121)
T 2lxf_A 63 VGYVTNNEDGS-VS-GVVQGP----KEQVDAFVKYLHKGSP-KSVVK 102 (121)
T ss_dssp EEEEEECTTSC-EE-EEEEEE----HHHHHHHHHHHHHCCT-TCCEE
T ss_pred EEEEEECCCCC-EE-EEEEEC----HHHHHHHHHHHHhCCC-CCEEE
Confidence 59999988774 44 556665 4556666666655444 44443
No 17
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=31.87 E-value=77 Score=21.18 Aligned_cols=42 Identities=17% Similarity=0.123 Sum_probs=26.1
Q ss_pred ccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEE
Q psy11503 54 AQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIY 102 (172)
Q Consensus 54 ~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~ 102 (172)
.|||+|..+| .| .+..+-. .+.|++.++.+++-.| ..+|.-+
T Consensus 31 ~G~V~N~~dG-~V-ei~~eG~----~~~i~~f~~~l~~gP~-~a~V~~v 72 (88)
T 1ulr_A 31 SGYAENLPDG-RV-EVVAEGP----KEALELFLHHLKQGPR-LARVEAV 72 (88)
T ss_dssp EEEEEECTTS-CE-EEEEESC----HHHHHHHHHHHHHCST-TCEEEEE
T ss_pred eEEEEECCCC-cE-EEEEEeC----HHHHHHHHHHHHhCCC-CcEEEEE
Confidence 5999998877 34 4456665 4557777777774444 5555433
No 18
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=29.30 E-value=58 Score=26.51 Aligned_cols=32 Identities=13% Similarity=0.049 Sum_probs=28.0
Q ss_pred CCCeEEEEEeeCcchHHHHHHHHHHHHHHhhh
Q psy11503 110 VSEASVVIAISSPHRQTALSAVEHAINKLKEM 141 (172)
Q Consensus 110 vGe~~v~Vavas~hR~~af~A~~~~id~lK~~ 141 (172)
.+..+.-|.+.++.|+||.+=++.++++||.+
T Consensus 327 ~~~~v~~vi~~G~~~~eA~~k~~~al~~i~~~ 358 (363)
T 4ffl_A 327 GEYPVFTMVFWGKDREETGAKRCKGLSVLKER 358 (363)
T ss_dssp SSSCEEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEEEEEEECCHHHHHHHHHHHHHHHHHH
Confidence 45567778999999999999999999999976
No 19
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=27.47 E-value=43 Score=28.07 Aligned_cols=34 Identities=21% Similarity=0.163 Sum_probs=25.7
Q ss_pred ccCCCCeEEEEEeeCcchHHHHHHHHHHHHHHhh
Q psy11503 107 NVPVSEASVVIAISSPHRQTALSAVEHAINKLKE 140 (172)
Q Consensus 107 ~l~vGe~~v~Vavas~hR~~af~A~~~~id~lK~ 140 (172)
.|++||.|-+|+-||+-....-+..+..+++|+.
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~ 42 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQ 42 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHh
Confidence 5899999999999998764434556666777764
No 20
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=27.14 E-value=1.1e+02 Score=20.92 Aligned_cols=43 Identities=16% Similarity=0.057 Sum_probs=27.2
Q ss_pred ccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEE
Q psy11503 54 AQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIY 102 (172)
Q Consensus 54 ~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~ 102 (172)
.|||+|..+| .|+ +..+-. ...|++.++.++++-|-..+|.-+
T Consensus 40 ~G~V~N~~dG-~Ve-i~~eG~----~~~l~~f~~~l~~~gP~~a~V~~v 82 (102)
T 1urr_A 40 RGWCMNTRDG-TVK-GQLEAP----MMNLMEMKHWLENNRIPNAKVSKA 82 (102)
T ss_dssp EEEEEECTTS-CEE-EEEEEC----HHHHHHHHHHHHHCCSTTCEEEEE
T ss_pred cEEEEECCCC-CEE-EEEEcC----HHHHHHHHHHHHhcCCCccEEEEE
Confidence 5999998876 343 456665 556777877777543324454433
No 21
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=26.81 E-value=1.1e+02 Score=20.88 Aligned_cols=41 Identities=10% Similarity=0.130 Sum_probs=25.9
Q ss_pred ccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEE
Q psy11503 54 AQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVA 100 (172)
Q Consensus 54 ~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~ 100 (172)
.|||+|..+| .|+ +..+-. ...|++.++.+++.-|-..+|.
T Consensus 37 ~G~V~N~~dG-~Ve-i~~eG~----~~~v~~f~~~l~~~~p~~a~V~ 77 (99)
T 2vh7_A 37 VGWVQNTDRG-TVQ-GQLQGP----ISKVRHMQEWLETRGSPKSHID 77 (99)
T ss_dssp EEEEEECTTS-CEE-EEEEEE----HHHHHHHHHHHHHTCSTTCEEE
T ss_pred cEEEEECCCC-CEE-EEEEcC----HHHHHHHHHHHHhcCCCceEEE
Confidence 5999998876 343 445655 4567777777775433244443
No 22
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=26.74 E-value=24 Score=19.02 Aligned_cols=15 Identities=33% Similarity=0.643 Sum_probs=12.3
Q ss_pred cEEEEEEeCCChHHH
Q psy11503 9 ASVVIAISSPHRQTA 23 (172)
Q Consensus 9 ~~v~v~v~s~hR~~a 23 (172)
++|||-.+++||.-|
T Consensus 11 SSvFITLapp~r~~a 25 (26)
T 2k9u_B 11 SSVFITLAPPRRDVX 25 (26)
T ss_dssp EEEEEEECCSSCCC-
T ss_pred eeEEEEecCcccccc
Confidence 689999999999754
No 23
>2od6_A Hypothetical protein; metagenomics target, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE OHA; 1.85A {Uncultured marine organism} SCOP: d.58.4.22
Probab=26.46 E-value=10 Score=26.51 Aligned_cols=23 Identities=35% Similarity=0.660 Sum_probs=20.5
Q ss_pred HHHHHHHHhhhCcceeeeecCCC
Q psy11503 131 VEHAINKLKEMAPIWKKEEYAPG 153 (172)
Q Consensus 131 ~~~~id~lK~~vpiWKkE~~~dg 153 (172)
.+..||.+.+.+|+|-||....|
T Consensus 21 melfidavektapvwvkemksrg 43 (110)
T 2od6_A 21 MELFIDAVEKTAPVWVKEMKSRG 43 (110)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHhccCcHHHHHhhhcc
Confidence 56789999999999999988877
No 24
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=26.04 E-value=51 Score=28.19 Aligned_cols=34 Identities=18% Similarity=0.188 Sum_probs=26.1
Q ss_pred ccCCCCeEEEEEeeCcchHHHHHHHHHHHHHHhh
Q psy11503 107 NVPVSEASVVIAISSPHRQTALSAVEHAINKLKE 140 (172)
Q Consensus 107 ~l~vGe~~v~Vavas~hR~~af~A~~~~id~lK~ 140 (172)
.|++||.|-+|+-||+-....-+..+..+++|+.
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~ 72 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQR 72 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHH
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHh
Confidence 5899999999999998765444556666777764
No 25
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=25.17 E-value=1.6e+02 Score=19.68 Aligned_cols=41 Identities=20% Similarity=0.294 Sum_probs=26.9
Q ss_pred ccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEE
Q psy11503 54 AQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAI 101 (172)
Q Consensus 54 ~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i 101 (172)
.|||+|..+| .| .+..+-. ...|++.++.+++..| -.+|.-
T Consensus 31 ~G~V~N~~dG-~V-ei~~eG~----~~~i~~f~~~l~~~~p-~a~V~~ 71 (91)
T 2fhm_A 31 AGWVKNRDDG-RV-EILAEGP----ENALQSFVEAVKNGSP-FSKVTD 71 (91)
T ss_dssp EEEEEECTTS-CE-EEEEEEC----HHHHHHHHHHHHTTCS-SSEEEE
T ss_pred eEEEEECCCC-cE-EEEEEeC----HHHHHHHHHHHHhCCC-ccEEEE
Confidence 4999998876 34 3556665 4567777777777665 344433
No 26
>2ipr_A Large T antigen; DNA binding protein; 1.50A {Simian virus 40} SCOP: d.89.1.1 PDB: 2itj_A 2itl_A 2nl8_A 1tbd_A 2fuf_A* 2if9_A 2ntc_A 2tbd_A 3qk2_A* 1z1d_B 3qn2_A*
Probab=24.95 E-value=2.1e+02 Score=21.17 Aligned_cols=52 Identities=12% Similarity=0.119 Sum_probs=38.4
Q ss_pred eEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCCeEEEEEeeCcchHHHHH
Q psy11503 67 VSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSEASVVIAISSPHRQTALS 129 (172)
Q Consensus 67 ~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe~~v~Vavas~hR~~af~ 129 (172)
..|-|+.. ++++.+-..+.++|. ... ..-|..+ |..+|++...++||-.|..
T Consensus 32 ~fliyTT~-----eK~~~Ly~~l~~kF~-~~f-~srh~~~----~~~ll~~it~~khRVSAv~ 83 (133)
T 2ipr_A 32 CFAIYTTK-----EKAALLYKKIMEKYS-VTF-ISRHNSY----NHNILFFLTPHRHRVSAIN 83 (133)
T ss_dssp EEEEEECH-----HHHHHHHHHHHHHTT-CSE-EEEEEET----TEEEEEEEEEEEEEHHHHH
T ss_pred eEEEEEcH-----HHHHHHHHHHHHhcC-cce-EEEEeeC----CCcEEEEEcCCCccHHHHH
Confidence 56889875 556677777767895 766 4555542 5599999999999988753
No 27
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=24.80 E-value=70 Score=21.26 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHHHHHhhCCCccEEEEEEeeec
Q psy11503 76 SMALKVFKDICNNLRETWPDIVNVAIYHRLGN 107 (172)
Q Consensus 76 ~ma~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~ 107 (172)
+-|...|.+-+.++... |+..|.|+|=.|.
T Consensus 15 ~eA~~~l~~fl~~a~~~--g~~~v~IIHGkG~ 44 (83)
T 2zqe_A 15 AEALLEVDQALEEARAL--GLSTLRLLHGKGT 44 (83)
T ss_dssp HHHHHHHHHHHHHHHHT--TCSEEEEECCSTT
T ss_pred HHHHHHHHHHHHHHHHC--CCCEEEEEECCCc
Confidence 45788999999998877 5899999999997
No 28
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=24.55 E-value=1.1e+02 Score=20.61 Aligned_cols=42 Identities=10% Similarity=-0.093 Sum_probs=26.4
Q ss_pred ccccccccccceeeEEEEeeChhHHHHHHHHHHHHH-HhhCCCccEEEEE
Q psy11503 54 AQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNL-RETWPDIVNVAIY 102 (172)
Q Consensus 54 ~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~-~~~~~gi~~v~i~ 102 (172)
.|||+|..+| .| .+..+-. ...|++.++.+ .+..| ..+|.-+
T Consensus 33 ~G~V~N~~dG-~V-ei~~eG~----~~~i~~f~~~l~~~gP~-~a~V~~v 75 (92)
T 2gv1_A 33 TGYAKNLDDG-SV-EVVACGE----EGQVEKLMQWLKSGGPR-SARVERV 75 (92)
T ss_dssp CCEEEECSSS-CE-EEEECSC----HHHHHHHHHHHHHTSST-TSEEEEE
T ss_pred eEEEEECCCC-cE-EEEEEeC----HHHHHHHHHHhhccCCC-ceEEEEE
Confidence 5999998876 34 3445654 45577777777 65544 5555433
No 29
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=24.36 E-value=42 Score=27.88 Aligned_cols=34 Identities=26% Similarity=0.258 Sum_probs=23.8
Q ss_pred ccCCCCeEEEEEeeCcchHHHHHHHHHHHHHHhh
Q psy11503 107 NVPVSEASVVIAISSPHRQTALSAVEHAINKLKE 140 (172)
Q Consensus 107 ~l~vGe~~v~Vavas~hR~~af~A~~~~id~lK~ 140 (172)
.|++||.|-+|+-|++-....-+..+..+++|+.
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~ 41 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTD 41 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHh
Confidence 5899999999999987543333445556666664
No 30
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=23.62 E-value=81 Score=21.25 Aligned_cols=42 Identities=14% Similarity=0.080 Sum_probs=26.0
Q ss_pred ccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEE
Q psy11503 54 AQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIY 102 (172)
Q Consensus 54 ~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~ 102 (172)
.|||+|..+| .| .+..+-. ...|++.++.+++-.| ..+|.-+
T Consensus 33 ~G~V~N~~dG-~V-ei~~~G~----~~~v~~f~~~l~~gP~-~a~V~~v 74 (91)
T 1w2i_A 33 NGWVRNLPDG-SV-EAVLEGD----EERVEALIGWAHQGPP-LARVTRV 74 (91)
T ss_dssp EEEEEECTTS-CE-EEEEEEE----HHHHHHHHHHTTTCST-TCEEEEE
T ss_pred eEEEEECCCC-CE-EEEEEeC----HHHHHHHHHHHHhCCC-CcEEEEE
Confidence 5999998877 34 3445654 4557777777774444 5555433
No 31
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=23.61 E-value=99 Score=21.34 Aligned_cols=43 Identities=14% Similarity=0.139 Sum_probs=27.3
Q ss_pred cccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEEE
Q psy11503 53 DAQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAIY 102 (172)
Q Consensus 53 ~~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i~ 102 (172)
..|||+|..+| .|+ +..+-. ...|++.++.+++..| ..+|.-+
T Consensus 42 L~G~V~N~~dG-~Ve-i~~eG~----~~~i~~f~~~l~~gP~-~A~V~~v 84 (101)
T 2bjd_A 42 IKGYAKNLPDG-SVE-VVAEGY----EEALSKLLERIKQGPP-AAEVEKV 84 (101)
T ss_dssp CEEEEEECTTS-CEE-EEEEEE----HHHHHHHHHHHTTCST-TCEEEEE
T ss_pred CeEEEEECCCC-cEE-EEEEeC----HHHHHHHHHHHHhCCC-ccEEEEE
Confidence 35999998876 343 456655 4557777777776644 5555433
No 32
>1j27_A Hypothetical protein TT1725; structural genomics, hypothetical protein from thermus therm HB8, MAD; 1.70A {Thermus thermophilus} SCOP: d.58.50.1
Probab=23.37 E-value=1.9e+02 Score=20.11 Aligned_cols=60 Identities=15% Similarity=0.132 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhhCCCccEEEEEEeeeccCCCC-eEEEEEeeCcchHHHHHHHHHHHHHHhhhCc
Q psy11503 79 LKVFKDICNNLRETWPDIVNVAIYHRLGNVPVSE-ASVVIAISSPHRQTALSAVEHAINKLKEMAP 143 (172)
Q Consensus 79 ~~~l~~I~~e~~~~~~gi~~v~i~Hr~G~l~vGe-~~v~Vavas~hR~~af~A~~~~id~lK~~vp 143 (172)
++.++.|.++++++|+ +.-. -+|....=+ ..+-+++-|..|..+-+-++.+++.+-...+
T Consensus 23 R~vvksl~~rlr~rFn-VSvA----Ev~~qD~~q~a~igva~Vs~~~~~~~~~l~~v~~~ie~~~~ 83 (102)
T 1j27_A 23 RALIKPALERLKARFP-VSAA----RLYGLDAWGYEVVGFTLLGNDPAWVEETMRAAARFLAEAGG 83 (102)
T ss_dssp HHHHHHHHHHHHHHSS-CEEE----EEECTTCSSEEEEEEEEEESCHHHHHHHHHHHHHHHHHSCS
T ss_pred HHHHHHHHHHHhhcCC-eEEE----EecCccccceEEEEEEEEECCHHHHHHHHHHHHHHHHhCCC
Confidence 5568889999999997 6533 345543333 5667777888888887777777777666544
No 33
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=20.25 E-value=1e+02 Score=21.13 Aligned_cols=41 Identities=20% Similarity=0.051 Sum_probs=25.2
Q ss_pred ccccccccccceeeEEEEeeChhHHHHHHHHHHHHHHhhCCCccEEEE
Q psy11503 54 AQWKENSECMWRVVSLHYEAYKSMALKVFKDICNNLRETWPDIVNVAI 101 (172)
Q Consensus 54 ~~wv~nse~G~~V~~L~ye~y~~ma~~~l~~I~~e~~~~~~gi~~v~i 101 (172)
.|||+|..+| .|+ +..+-. ...|++.++.+.+..| ...|.-
T Consensus 41 ~G~VrN~~dG-~Ve-i~~eG~----~~~l~~f~~~l~~gPp-~A~V~~ 81 (98)
T 3trg_A 41 TGWVKNLSHG-DVE-LVACGE----RDSIMILTEWLWEGPP-QAAVSN 81 (98)
T ss_dssp EEEEEECTTS-CEE-EEEEEE----HHHHHHHHHHTTTCST-TCEEEE
T ss_pred eEEEEECCCC-EEE-EEEEEC----HHHHHHHHHHHHhCCC-CcEEEE
Confidence 4999998876 333 445554 4566777777766444 555443
Done!