Query psy11511
Match_columns 631
No_of_seqs 256 out of 1508
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 20:18:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11511.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11511hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a65_A Leutaa, Na(+):neurotran 100.0 9.2E-94 3.1E-98 795.4 11.5 436 33-620 2-465 (519)
2 2a65_A Leutaa, Na(+):neurotran 98.9 1.8E-10 6.3E-15 127.9 2.6 118 214-360 3-125 (519)
3 3l1l_A Arginine/agmatine antip 79.5 16 0.00053 38.5 12.8 102 273-380 135-239 (445)
4 3gia_A Uncharacterized protein 70.7 6.3 0.00022 41.6 6.8 100 273-379 135-235 (444)
5 4djk_A Probable glutamate/gamm 69.9 38 0.0013 36.2 13.1 106 273-384 140-253 (511)
6 2jln_A MHP1; hydantoin, transp 53.3 56 0.0019 35.4 10.5 43 266-308 145-187 (501)
7 4ain_A Glycine betaine transpo 41.3 42 0.0014 37.0 6.9 37 472-508 399-435 (539)
8 3dh4_A Sodium/glucose cotransp 16.9 5E+02 0.017 28.0 10.1 47 472-520 309-356 (530)
9 2xq2_A Sodium/glucose cotransp 7.4 8.6E+02 0.03 26.4 8.1 44 472-517 338-382 (593)
10 3u85_B Histone-lysine N-methyl 6.5 1.5E+02 0.005 17.5 0.6 9 240-248 3-11 (21)
No 1
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=100.00 E-value=9.2e-94 Score=795.36 Aligned_cols=436 Identities=19% Similarity=0.355 Sum_probs=391.5
Q ss_pred cccccCCccccceEEeeceeeeEecC------------ceeehHHHHHHHHHHhHHHHHHHHHhhc----ccCCChHHHH
Q psy11511 33 QTKVSDWTSSFKIEVPLQYCTSIVGN------------IRVFLVPYFIILFLCGIPILYMELAVGQ----FTRRGPIGVL 96 (631)
Q Consensus 33 ~~~~~~w~s~~~~~~~~~~~~~~~gn------------GgaFlipY~i~l~liGiPll~lElalGQ----~~r~g~i~~~ 96 (631)
+.+|++|+||++|++++.++++|+|| ||||++||+++++++|+|++++|+++|| ++|+|++++|
T Consensus 2 ~~~R~~W~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGgAFlipYli~l~~~GiPll~~E~alGq~~~~~~r~~~i~a~ 81 (519)
T 2a65_A 2 EVKREHWATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGHGTTPAIF 81 (519)
T ss_dssp ---CCCCSCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTTCCSHHHHH
T ss_pred CcccccCCcHHHHHHHHHHHHhcccHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHhcccchhccCCCHHHHH
Confidence 34689999999999999999999997 7899999999999999999999999999 8999999999
Q ss_pred hhhccc--cccccchhhHHHHHhhhHHHHHHHHHHHHHHHhcccCCC--CCcCCCCCCCCcccCCCCCCCCCcccccccc
Q psy11511 97 SKLCPF--FKGAGISSVIISFFMSTYYNVLIAYSLYYFSTSFRSQLP--WQHCGNRWNTQHCWVPPTLTGEDLGAVSLLQ 172 (631)
Q Consensus 97 ~~l~p~--~~GiG~~~~l~~~~i~~YY~vi~aW~l~Y~~~sf~~~lP--W~~C~~~wnt~~C~~~~~~~~~~~~~~~~~~ 172 (631)
+|++|+ |||+|++++++++++++||+|+++|+++|+++|+++++| |++|+ +|.
T Consensus 82 ~~l~~~~~~~giG~~~v~~~~~i~~yY~vi~gW~l~Y~~~s~~~~lp~~w~~~~------~~~----------------- 138 (519)
T 2a65_A 82 YLLWRNRFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPNAT------DPD----------------- 138 (519)
T ss_dssp HHHSCSHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC--C------CHH-----------------
T ss_pred HHhcCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccC------Ccc-----------------
Confidence 999987 999999999999999999999999999999999999999 55432 010
Q ss_pred CCCCCCCCCCchhhhhccccccccccCCCCCccCcCCCCCCCcccccchhHHHHHhhhccccccCccccccceecccccC
Q psy11511 173 NLSKPVPSKTPSEEFYNISDEMSTCSSYSDSISDVGSTFKPRKRDHWTSKVQFILACVGYSIGIGNLWRFPHKVLQISSG 252 (631)
Q Consensus 173 ~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~fila~~g~avglgniw~Fp~~vl~~~~~ 252 (631)
++.++.++||+ ++++.+++
T Consensus 139 ------~~~~~~~~~f~-------------------------------------------------------~~l~~~~~ 157 (519)
T 2a65_A 139 ------SILRPFKEFLY-------------------------------------------------------SYIGVPKG 157 (519)
T ss_dssp ------HHHHHHHHHHH-------------------------------------------------------HHHTCCSS
T ss_pred ------cccCcHHHHHH-------------------------------------------------------HHHCCCCC
Confidence 00123456665 12344556
Q ss_pred cCccCccchHHHHHHHHHHHHHHHHhhcce-ecccceeeeechhhHHHHHHHHHhhcccCC----hhhhhhheeeccccc
Q psy11511 253 IDQMGDFRWELVACSFVSWILVYFALWKSV-RSSGRVLYFTATIPFLLIFVFLCFSLTLDG----SEIGLRYFFLPNFEL 327 (631)
Q Consensus 253 i~~~g~l~w~lv~~l~~~wilv~~~l~kGi-~~~~Kv~~~~~~~p~vll~il~~r~ltl~g----a~~Gl~~~~~pd~~~ 327 (631)
+++.|.++|+++.+++++|+++++++.||+ |..+|+.++++++|+++++++++|++|||| |.+|++|+++|||++
T Consensus 158 ~~~~g~~~~~~~~~~~~~w~i~~~ii~~Gv~kgiek~~~~~mp~l~vlliiL~ir~ltLpGp~~~A~~Gl~~~~~Pd~s~ 237 (519)
T 2a65_A 158 DEPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEK 237 (519)
T ss_dssp SSCBCCCCHHHHHHHHHHHHHHHHHHTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEHHHHHHHHHSCCTTS
T ss_pred cccccCccHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHhcCCHHH
Confidence 788899999999999999999999999999 668999999999999999999999999999 999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHhhhhhHhhhhccccccCCccccceehhhhhHHHHHHHHHHhhhhccccccccccchhhhhhc
Q psy11511 328 LSDHKVWVNAGAQIFNSIGIAYGAVITFSSYNKYNNQIIVDTMVVSIINTITSVLIGVFIFITIGNITYEHETSIENVIL 407 (631)
Q Consensus 328 l~~~~vW~~A~~Q~ffslslg~G~~it~gSy~~~~~ni~~da~~v~~~~~~~sllagl~if~~~g~~~~~~~~~~~~~~~ 407 (631)
+.++++|.+|++|+|||+|+|+|++++||||+|+|||+.||+++++..|+.+|++||++||+.+
T Consensus 238 L~~~~vw~~A~gQ~FFSLslG~G~~ity~SY~~~~~n~~~~a~~v~~~n~~~sllaG~~IF~~l---------------- 301 (519)
T 2a65_A 238 LKDPGVWIAAVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSISIPA---------------- 301 (519)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTSSHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHTTHHHHHHHH----------------
T ss_pred hCCHHHHHHHHHHHHHHhHHHHhHHhhhhcccCCCcChHhhHHHHHHHHHHHHHHHHHHHHHHH----------------
Confidence 9999999999999999999999999999999999999999999999999999999999999843
Q ss_pred ccccccccccccchhhhhhhhhhhccccccccceeeeeeecccccccCcc-ccccccCC-CceEeehHHHHHhcCCCchh
Q psy11511 408 DGFISSYNKYNNQIIVDTMVVSIINTITSVLIGVFIFITIGNITYEHETS-IENVILDG-PGLIFVVYPQALAKLPFPNF 485 (631)
Q Consensus 408 ~~~~~s~n~~~~~~~~d~~~~~~~~~~~~~~~~~~~f~~~G~~~~~~~~~-~~~v~~~G-pgL~Fi~lP~~f~~mp~~~~ 485 (631)
|+++ +|.+ ++|+.++| |||+|++||++|++||+|++
T Consensus 302 ----------------------------------------gf~a--~g~~~~~~v~~~G~pgL~Fi~~P~af~~mp~g~~ 339 (519)
T 2a65_A 302 ----------------------------------------AVAF--FGVANAVAIAKAGAFNLGFITLPAIFSQTAGGTF 339 (519)
T ss_dssp ----------------------------------------HHHH--HCHHHHHHHHHHCSSHHHHTHHHHHHTTSTTHHH
T ss_pred ----------------------------------------HHHh--cCCcchHHHhcCCCCceeHHHHHHHHHhCCCccc
Confidence 3333 3455 55666789 99999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhhHHHHHHhhhccCCccccccccchhhhHHHHHHHHHHhcccccccc-cceeehhhHHHhhh
Q psy11511 486 WAVLFFFSLLCLALNSQFALVEVVVTSIQDGFPRWIKRYLVCHEIVVLVVCIVSFFFGLPYVTQG-GIYFFQLIDHYTAS 564 (631)
Q Consensus 486 w~~lFFl~l~~agltS~i~l~E~iv~~l~d~f~~~~rr~~~~~~~~~~~~c~~~fl~gl~~~t~~-G~~~~~l~D~~~~~ 564 (631)
|+++||+|++++|+||+++++|++++.++|+++ +.||+ ++.++|+++|++|+|+++++ | +|++|+++++
T Consensus 340 ~~~lFF~~l~~agltS~i~~~E~~vt~l~D~~~-~~R~~------~~~~v~~~~fllgl~~~~~~~g---~~~~D~~~~~ 409 (519)
T 2a65_A 340 LGFLWFFLLFFAGLTSSIAIMQPMIAFLEDELK-LSRKH------AVLWTAAIVFFSAHLVMFLNKS---LDEMDFWAGT 409 (519)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CCHHH------HHHHHHHHHHHHHHHHHHBTTH---HHHHHHHTTT
T ss_pred hHHHHHHHHHHHHHHHHHHHhhHhHHHHHHhhC-CcHHH------HHHHHHHHHHHHHHHHHcCCCC---cchHHHHHhH
Confidence 999999999999999999999999999999995 33332 68889999999999999998 7 9999999999
Q ss_pred HHHHHHHHHHhheeeEEeCchhHHHHHhhhcCCCCcceeeeeehhhhHHHHHHHHH
Q psy11511 565 TAVMYVAFFEVVAVAWIYGSDKLARNVHHMTGKFPSLYFRFCWSIAAPLLILIRIS 620 (631)
Q Consensus 565 ~~l~~~~l~e~i~v~wvyG~~~~~~di~~m~g~~~~~~~~~~w~~v~Pi~l~~~~~ 620 (631)
+.+++++++|+++++|+||.||+++|++.|.++++..+|++||||++|+++++++.
T Consensus 410 ~~l~~~~l~~~i~v~wv~g~~~~~~~i~~~~~~~~~~~w~~~~~~v~P~~l~~i~~ 465 (519)
T 2a65_A 410 IGVVFFGLTELIIFFWIFGADKAWEEINRGGIIKVPRIYYYVMRYITPAFLAVLLV 465 (519)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCSSCCCTHHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhheeeehhHHHHHHHcccCCchHHHHHHeEEehHHHHHHHHHH
Confidence 99999999999999999999999999999999888788999999999998887654
No 2
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=98.94 E-value=1.8e-10 Score=127.88 Aligned_cols=118 Identities=19% Similarity=0.377 Sum_probs=85.0
Q ss_pred CcccccchhHHHHHhhhccccccCccccccceecccccCcCccCccchHHHHHHHHHHHHHHHHhhcceecccceeeeec
Q psy11511 214 RKRDHWTSKVQFILACVGYSIGIGNLWRFPHKVLQISSGIDQMGDFRWELVACSFVSWILVYFALWKSVRSSGRVLYFTA 293 (631)
Q Consensus 214 ~~~~~w~s~~~fila~~g~avglgniw~Fp~~vl~~~~~i~~~g~l~w~lv~~l~~~wilv~~~l~kGi~~~~Kv~~~~~ 293 (631)
++||+|+||.+|||||+|+|||+||+|||||.+++++++ ++++.|+ ++.++.
T Consensus 3 ~~R~~W~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGg-----------------AFlipYl-----------i~l~~~ 54 (519)
T 2a65_A 3 VKREHWATRLGLILAMAGNAVGLGNFLRFPVQAAENGGG-----------------AFMIPYI-----------IAFLLV 54 (519)
T ss_dssp --CCCCSCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTH-----------------HHHHHHH-----------HHHHHT
T ss_pred cccccCCcHHHHHHHHHHHHhcccHHHHHHHHHHHcCCc-----------------HHHHHHH-----------HHHHHH
Confidence 368999999999999999999999999999999999876 3334444 222334
Q ss_pred hhhHHHHHHHHHhhc---ccCChhhhhhheeecc--ccccccHHHHHHHHHHHHHHHhhhhhHhhhhccccc
Q psy11511 294 TIPFLLIFVFLCFSL---TLDGSEIGLRYFFLPN--FELLSDHKVWVNAGAQIFNSIGIAYGAVITFSSYNK 360 (631)
Q Consensus 294 ~~p~vll~il~~r~l---tl~ga~~Gl~~~~~pd--~~~l~~~~vW~~A~~Q~ffslslg~G~~it~gSy~~ 360 (631)
.+|.+++-..+.|-. +-.|+....+. ..|+ |+-+.-..+....+..++|+.-+||-....+.|...
T Consensus 55 GiPll~~E~alGq~~~~~~r~~~i~a~~~-l~~~~~~~giG~~~v~~~~~i~~yY~vi~gW~l~Y~~~s~~~ 125 (519)
T 2a65_A 55 GIPLMWIEWAMGRYGGAQGHGTTPAIFYL-LWRNRFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVG 125 (519)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCSHHHHHHH-HSCSHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccchhccCCCHHHHHHH-hcCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 689888888888821 22344444432 3454 766655667777788899999899987776666543
No 3
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=79.48 E-value=16 Score=38.49 Aligned_cols=102 Identities=9% Similarity=0.045 Sum_probs=52.0
Q ss_pred HHHHHhhcceecccceeeeechhhHHHHHHHHHhhcccCChhhhhhheeecccccc--ccHHHHHHHHHHHHHHHhhhhh
Q psy11511 273 LVYFALWKSVRSSGRVLYFTATIPFLLIFVFLCFSLTLDGSEIGLRYFFLPNFELL--SDHKVWVNAGAQIFNSIGIAYG 350 (631)
Q Consensus 273 lv~~~l~kGi~~~~Kv~~~~~~~p~vll~il~~r~ltl~ga~~Gl~~~~~pd~~~l--~~~~vW~~A~~Q~ffslslg~G 350 (631)
++.....+|+|..+|+..+...+-.+.++++.+-++...+. + .+.++|+.- .+...+..++..++|+. .|+-
T Consensus 135 ~~~~in~~g~~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~af-~G~e 208 (445)
T 3l1l_A 135 IFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRG-E----TYMAAWNVSGLGTFGAIQSTLNVTLWSF-IGVE 208 (445)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCC-C----CCCCC-----------HHHHHHHHHHTT-TTTT
T ss_pred HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-h----hcccccCccCCccHHHHHHHHHHHHHHH-HhHH
Confidence 44556678999988875433222222222233333221111 0 112233211 12345677888888888 6888
Q ss_pred Hhhhhcccccc-CCccccceehhhhhHHHHH
Q psy11511 351 AVITFSSYNKY-NNQIIVDTMVVSIINTITS 380 (631)
Q Consensus 351 ~~it~gSy~~~-~~ni~~da~~v~~~~~~~s 380 (631)
....++...|+ ++|+.|..........+.-
T Consensus 209 ~~~~~~~e~k~p~r~ip~a~~~~~~~~~~~y 239 (445)
T 3l1l_A 209 SASVAAGVVKNPKRNVPIATIGGVLIAAVCY 239 (445)
T ss_dssp HHHHGGGGBSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCccccccHHHHHHHHHHHHHH
Confidence 88888887776 4667776555444444333
No 4
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=70.68 E-value=6.3 Score=41.64 Aligned_cols=100 Identities=14% Similarity=0.204 Sum_probs=48.3
Q ss_pred HHHHHhhcceecccceeeeechhhHHHHHHHHHhhcccCChhhhhhheeeccccccccHHHHHHHHHHHHHHHhhhhhHh
Q psy11511 273 LVYFALWKSVRSSGRVLYFTATIPFLLIFVFLCFSLTLDGSEIGLRYFFLPNFELLSDHKVWVNAGAQIFNSIGIAYGAV 352 (631)
Q Consensus 273 lv~~~l~kGi~~~~Kv~~~~~~~p~vll~il~~r~ltl~ga~~Gl~~~~~pd~~~l~~~~vW~~A~~Q~ffslslg~G~~ 352 (631)
+......+|+|..+|+......+-.+.++++.+-++..... + .+.|++..- ....+..++..++|+.. |+-..
T Consensus 135 ~~~~in~~g~~~~~~~~~~~~~~~i~~~~~~ii~~~~~~~~-~----~~~~~~~~~-g~~~~~~~~~~~~~a~~-G~e~~ 207 (444)
T 3gia_A 135 FFTALNFFGSKAVGRAEFFIVLVKLLILGLFIFAGLITIHP-S----YVIPDLAPS-AVSGMIFASAIFFLSYM-GFGVI 207 (444)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCG-G----GTSCCCSHH-HHHHHHHHHHHGGGGGT-HHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCh-h----hcCCCCCCc-chHHHHHHHHHHHHHHH-hHHHH
Confidence 45566678999988876433222222222222222111111 1 123432211 11235566666677663 77777
Q ss_pred hhhcccccc-CCccccceehhhhhHHHH
Q psy11511 353 ITFSSYNKY-NNQIIVDTMVVSIINTIT 379 (631)
Q Consensus 353 it~gSy~~~-~~ni~~da~~v~~~~~~~ 379 (631)
..++...|+ ++|++|..........+.
T Consensus 208 ~~~~~e~k~P~r~ip~ai~~~~~~~~~~ 235 (444)
T 3gia_A 208 TNASEHIENPKKNVPRAIFISILIVMFV 235 (444)
T ss_dssp HTTGGGBSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCcccchhHHHHHHHHHHHHH
Confidence 777776655 345666555444433333
No 5
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=69.93 E-value=38 Score=36.17 Aligned_cols=106 Identities=11% Similarity=0.193 Sum_probs=53.1
Q ss_pred HHHHHhhcceecccceeeee----chhhHHHHHHHHHhhcccCChhhhhh---heeeccccccccHHHHHHHHHHHHHHH
Q psy11511 273 LVYFALWKSVRSSGRVLYFT----ATIPFLLIFVFLCFSLTLDGSEIGLR---YFFLPNFELLSDHKVWVNAGAQIFNSI 345 (631)
Q Consensus 273 lv~~~l~kGi~~~~Kv~~~~----~~~p~vll~il~~r~ltl~ga~~Gl~---~~~~pd~~~l~~~~vW~~A~~Q~ffsl 345 (631)
+......+|+|..+|+..+. ...|.++++++.+..+. ++...+.+ ..+.|+++.. ..| .++..++|+.
T Consensus 140 ~~~~in~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~a~ 214 (511)
T 4djk_A 140 ALALTQFGGTKYTARIAKVGFFAGILLPAFILIALAAIYLH-SGAPVAIEMDSKTFFPDFSKV---GTL-VVFVAFILSY 214 (511)
T ss_dssp HHHHHHHTCSSSHHHHTHHHHHHTTHHHHHHHHHHHHHHTC-------------CCCCCTTST---TTT-TTHHHHHHHH
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcccccCcccccCCCcccc---hHH-HHHHHHHHHH
Confidence 45556678999888875432 12233333333222211 22111111 1123444322 223 4567788888
Q ss_pred hhhhhHhhhhcccccc-CCccccceehhhhhHHHHHHHHH
Q psy11511 346 GIAYGAVITFSSYNKY-NNQIIVDTMVVSIINTITSVLIG 384 (631)
Q Consensus 346 slg~G~~it~gSy~~~-~~ni~~da~~v~~~~~~~sllag 384 (631)
.|+-.....+...|+ ++|++|..+......+++-++..
T Consensus 215 -~G~e~~~~~a~E~k~P~k~ip~ai~~~~~~~~~~y~~~~ 253 (511)
T 4djk_A 215 -MGVEASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGG 253 (511)
T ss_dssp -TTGGGGTGGGSSSSCCTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred -hhHHHHHHHHHhccCcccchhHHHHHHHHHHHHHHHHHH
Confidence 577777788887765 56777766555444444444433
No 6
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=53.26 E-value=56 Score=35.45 Aligned_cols=43 Identities=5% Similarity=0.023 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHhhcceecccceeeeechhhHHHHHHHHHhhc
Q psy11511 266 CSFVSWILVYFALWKSVRSSGRVLYFTATIPFLLIFVFLCFSL 308 (631)
Q Consensus 266 ~l~~~wilv~~~l~kGi~~~~Kv~~~~~~~p~vll~il~~r~l 308 (631)
+.++.|++.......|.|...|.-.+.+++.++.++++.+..+
T Consensus 145 ~~~i~~~l~~~~~~~G~~~i~~~~~~~~p~~~i~~i~~~~~~l 187 (501)
T 2jln_A 145 WIVIFGAIQVVTTFYGITFIRWMNVFASPVLLAMGVYMVYLML 187 (501)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444566666666777777665544333333333444444444
No 7
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=41.31 E-value=42 Score=36.96 Aligned_cols=37 Identities=16% Similarity=0.067 Sum_probs=27.2
Q ss_pred hHHHHHhcCCCchhHHHHHHHHHHHHhhhhhhhhHHH
Q psy11511 472 VYPQALAKLPFPNFWAVLFFFSLLCLALNSQFALVEV 508 (631)
Q Consensus 472 ~lP~~f~~mp~~~~w~~lFFl~l~~agltS~i~l~E~ 508 (631)
++-+.++++|.+.+.+.++-+++++.=+||.=+..-+
T Consensus 399 alf~~l~~lP~~~i~~~l~iili~~FfvTSaDS~s~v 435 (539)
T 4ain_A 399 QLFGLLHALPGGQIMGIIAMILLGTFFITSADSASTV 435 (539)
T ss_dssp HHHHHHHTSTTHHHHHHHHHHHHHHHHHTTTHHHHHH
T ss_pred HHHHHHHHCchHHHHHHHHHHHHHHHHHHccchHHHH
Confidence 5667789999999999988887776666655444433
No 8
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=16.86 E-value=5e+02 Score=27.96 Aligned_cols=47 Identities=19% Similarity=0.224 Sum_probs=35.3
Q ss_pred hHHHHHhcCCCchhHHHHHHHHHHHHhhhhhhhhHHHHHHhhh-ccCCcc
Q psy11511 472 VYPQALAKLPFPNFWAVLFFFSLLCLALNSQFALVEVVVTSIQ-DGFPRW 520 (631)
Q Consensus 472 ~lP~~f~~mp~~~~w~~lFFl~l~~agltS~i~l~E~iv~~l~-d~f~~~ 520 (631)
++|.....+| +....++...++.+.++|.-+.+....+.+. |-+++.
T Consensus 309 ~~p~l~~~lp--~~l~Gl~~a~llAA~mST~ss~l~s~st~~~~Diy~~~ 356 (530)
T 3dh4_A 309 AYPWLTQFLP--VGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIYKEY 356 (530)
T ss_dssp HHHHHHTTCC--TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHcc--hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhHHHHHh
Confidence 5787766554 7788888888888888888888888888775 555443
No 9
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=7.40 E-value=8.6e+02 Score=26.45 Aligned_cols=44 Identities=20% Similarity=0.209 Sum_probs=33.6
Q ss_pred hHHHHHhcCCCchhHHHHHHHHHHHHhhhhhhhhHHHHHHhhh-ccC
Q psy11511 472 VYPQALAKLPFPNFWAVLFFFSLLCLALNSQFALVEVVVTSIQ-DGF 517 (631)
Q Consensus 472 ~lP~~f~~mp~~~~w~~lFFl~l~~agltS~i~l~E~iv~~l~-d~f 517 (631)
++|...+.+| +....++...++.+.++|.-+.+-...+.+. |-+
T Consensus 338 ~~p~l~~~lp--~~l~gl~~a~llaA~mST~~s~l~a~st~~~~Diy 382 (593)
T 2xq2_A 338 AYPWLTQFLP--VGVKGVVFAALAAAIVSSLASMLNSTATIFTMDIY 382 (593)
T ss_dssp HHHHHHHTSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTH
T ss_pred HHHHHHHHcC--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5787774444 7888889998988888888888888888765 443
No 10
>3u85_B Histone-lysine N-methyltransferase MLL; menin, MEN1, JUND, ledgf, TPR, transcription, epigeneti cancer; 3.00A {Homo sapiens}
Probab=6.47 E-value=1.5e+02 Score=17.54 Aligned_cols=9 Identities=44% Similarity=1.080 Sum_probs=6.6
Q ss_pred ccccceecc
Q psy11511 240 WRFPHKVLQ 248 (631)
Q Consensus 240 w~Fp~~vl~ 248 (631)
||||.+-..
T Consensus 3 wrfparpg~ 11 (21)
T 3u85_B 3 WRFPARPGT 11 (26)
T ss_pred cccccCCCc
Confidence 999987543
Done!