Query psy11518
Match_columns 139
No_of_seqs 231 out of 1193
Neff 11.5
Searched_HMMs 46136
Date Fri Aug 16 20:26:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11518.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11518hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0271|consensus 100.0 1.1E-27 2.3E-32 153.4 12.0 126 10-136 111-243 (480)
2 KOG0286|consensus 99.9 3.7E-26 8E-31 141.9 15.3 127 9-137 140-268 (343)
3 KOG0272|consensus 99.9 1.9E-27 4.2E-32 153.3 8.3 123 12-136 259-383 (459)
4 KOG0279|consensus 99.9 2E-25 4.3E-30 137.7 15.7 131 4-135 55-187 (315)
5 KOG0263|consensus 99.9 3.3E-26 7.2E-31 156.4 11.4 117 12-130 533-651 (707)
6 KOG0263|consensus 99.9 7.4E-26 1.6E-30 154.7 12.5 126 8-135 487-614 (707)
7 PTZ00421 coronin; Provisional 99.9 2.3E-24 5E-29 147.1 18.5 125 10-136 71-206 (493)
8 KOG0272|consensus 99.9 1.1E-25 2.4E-30 145.3 10.6 124 11-136 300-426 (459)
9 KOG0266|consensus 99.9 4.8E-24 1E-28 145.2 16.8 120 11-132 200-322 (456)
10 KOG0266|consensus 99.9 1.6E-23 3.5E-28 142.6 18.0 129 5-136 239-372 (456)
11 KOG0294|consensus 99.9 6.4E-24 1.4E-28 133.1 14.0 136 1-138 30-167 (362)
12 KOG0279|consensus 99.9 1.2E-23 2.7E-28 129.9 14.8 128 7-137 98-231 (315)
13 KOG0286|consensus 99.9 3E-23 6.6E-28 129.0 16.1 131 6-136 178-311 (343)
14 PTZ00420 coronin; Provisional 99.9 1.3E-22 2.8E-27 139.8 19.4 125 9-136 69-205 (568)
15 KOG0271|consensus 99.9 5.6E-24 1.2E-28 136.5 11.7 126 6-134 149-282 (480)
16 KOG0285|consensus 99.9 7.5E-24 1.6E-28 135.0 11.7 132 2-137 141-274 (460)
17 KOG0273|consensus 99.9 3.1E-23 6.7E-28 135.7 14.0 128 5-136 352-490 (524)
18 KOG0315|consensus 99.9 5.9E-22 1.3E-26 121.2 15.7 84 51-136 212-296 (311)
19 KOG0291|consensus 99.9 1.2E-22 2.5E-27 139.5 13.8 121 8-130 344-510 (893)
20 KOG0276|consensus 99.9 3.6E-23 7.9E-28 139.6 10.6 132 2-137 130-266 (794)
21 KOG0316|consensus 99.9 1.9E-22 4.2E-27 122.5 12.7 123 10-134 13-137 (307)
22 KOG0295|consensus 99.9 7.7E-22 1.7E-26 125.8 14.3 125 10-136 231-372 (406)
23 KOG0283|consensus 99.9 3E-22 6.6E-27 138.0 12.7 125 10-138 365-491 (712)
24 KOG0282|consensus 99.9 3.1E-23 6.8E-28 135.9 6.8 125 7-134 207-336 (503)
25 PTZ00421 coronin; Provisional 99.9 1E-20 2.2E-25 129.4 17.9 121 10-131 121-248 (493)
26 KOG0319|consensus 99.9 1.5E-21 3.2E-26 133.5 13.1 123 12-136 461-585 (775)
27 KOG0284|consensus 99.9 1.2E-22 2.5E-27 131.1 6.9 120 13-134 179-300 (464)
28 KOG0285|consensus 99.9 5.2E-21 1.1E-25 122.2 13.8 127 8-136 187-315 (460)
29 KOG0296|consensus 99.9 1.9E-20 4.1E-25 119.5 16.0 128 8-137 100-229 (399)
30 KOG0318|consensus 99.9 2.6E-20 5.7E-25 123.7 16.4 128 10-138 143-275 (603)
31 KOG0315|consensus 99.9 1.1E-20 2.4E-25 115.6 13.2 111 16-130 44-156 (311)
32 KOG0283|consensus 99.9 2E-21 4.2E-26 134.1 11.0 120 12-135 265-447 (712)
33 KOG0275|consensus 99.9 1.3E-22 2.7E-27 128.6 4.6 122 13-136 262-386 (508)
34 KOG0318|consensus 99.9 4.8E-20 1E-24 122.4 16.7 128 2-132 180-354 (603)
35 KOG0291|consensus 99.9 5.2E-20 1.1E-24 126.7 17.2 132 2-137 297-431 (893)
36 KOG0302|consensus 99.9 6.6E-21 1.4E-25 122.2 11.7 119 9-129 252-379 (440)
37 KOG0281|consensus 99.9 8.4E-22 1.8E-26 125.7 7.3 119 10-134 233-394 (499)
38 KOG0264|consensus 99.9 1.2E-20 2.5E-25 122.9 12.4 122 7-129 220-348 (422)
39 KOG0316|consensus 99.9 1.4E-20 2.9E-25 114.6 11.8 133 3-135 50-220 (307)
40 KOG0281|consensus 99.9 6E-22 1.3E-26 126.3 6.1 115 11-131 317-431 (499)
41 KOG0269|consensus 99.9 3.7E-21 8.1E-26 132.3 9.7 124 10-134 129-256 (839)
42 KOG0289|consensus 99.9 5.1E-20 1.1E-24 120.0 14.1 125 12-138 301-429 (506)
43 KOG0643|consensus 99.9 9.4E-20 2E-24 112.6 14.4 127 7-133 3-182 (327)
44 KOG0303|consensus 99.9 1.8E-20 3.8E-25 120.9 11.4 123 10-135 77-210 (472)
45 KOG0645|consensus 99.9 3.6E-19 7.9E-24 110.0 16.6 123 2-128 95-225 (312)
46 KOG0284|consensus 99.9 9.9E-22 2.2E-26 126.9 5.4 124 9-135 133-259 (464)
47 KOG0277|consensus 99.9 4.3E-20 9.3E-25 113.3 12.2 119 11-131 101-224 (311)
48 cd00200 WD40 WD40 domain, foun 99.8 4.4E-19 9.5E-24 112.9 17.0 123 12-136 7-131 (289)
49 KOG0319|consensus 99.8 6.6E-20 1.4E-24 125.6 13.2 115 10-126 501-617 (775)
50 KOG0265|consensus 99.8 7.4E-20 1.6E-24 114.4 12.2 126 9-137 85-213 (338)
51 KOG0295|consensus 99.8 1.4E-19 2.9E-24 115.7 13.5 101 25-127 305-405 (406)
52 KOG0647|consensus 99.8 1.1E-19 2.5E-24 113.7 12.7 122 14-138 27-155 (347)
53 PTZ00420 coronin; Provisional 99.8 1.2E-18 2.6E-23 120.4 19.0 125 10-136 121-257 (568)
54 KOG0296|consensus 99.8 7.2E-19 1.6E-23 112.4 16.4 124 10-135 60-185 (399)
55 KOG0265|consensus 99.8 1.3E-19 2.8E-24 113.3 12.7 125 10-136 43-171 (338)
56 KOG0292|consensus 99.8 5.6E-20 1.2E-24 128.6 11.8 118 10-129 47-166 (1202)
57 KOG0772|consensus 99.8 3.4E-20 7.4E-25 123.1 10.3 124 9-132 263-398 (641)
58 KOG0645|consensus 99.8 2E-18 4.4E-23 106.7 17.2 115 12-128 59-180 (312)
59 KOG0275|consensus 99.8 1.6E-21 3.5E-26 123.6 3.3 119 16-135 217-343 (508)
60 KOG0313|consensus 99.8 2.3E-19 4.9E-24 115.2 13.0 127 8-136 254-385 (423)
61 KOG0310|consensus 99.8 7.5E-19 1.6E-23 115.6 15.4 128 7-138 146-278 (487)
62 KOG0293|consensus 99.8 6E-20 1.3E-24 119.2 10.2 117 12-129 222-343 (519)
63 KOG0640|consensus 99.8 6.5E-20 1.4E-24 115.6 10.0 124 13-136 215-343 (430)
64 KOG0276|consensus 99.8 1.7E-19 3.7E-24 122.2 12.0 131 2-136 87-223 (794)
65 KOG0310|consensus 99.8 1.8E-19 3.9E-24 118.5 11.6 119 15-135 69-192 (487)
66 cd00200 WD40 WD40 domain, foun 99.8 6.1E-18 1.3E-22 107.6 18.6 123 12-136 49-173 (289)
67 PLN00181 protein SPA1-RELATED; 99.8 2E-18 4.2E-23 124.8 17.5 114 15-131 533-651 (793)
68 KOG0273|consensus 99.8 6.8E-19 1.5E-23 115.7 13.7 103 23-128 421-523 (524)
69 KOG0267|consensus 99.8 1.6E-20 3.4E-25 128.6 6.4 126 10-137 66-193 (825)
70 KOG0282|consensus 99.8 2.4E-20 5.3E-25 122.5 6.8 126 4-134 250-378 (503)
71 KOG0308|consensus 99.8 4E-19 8.7E-24 120.6 12.7 124 12-137 115-252 (735)
72 KOG0277|consensus 99.8 1.2E-18 2.7E-23 107.0 13.1 116 15-132 61-182 (311)
73 KOG0973|consensus 99.8 1.1E-18 2.5E-23 123.4 14.5 125 10-136 65-209 (942)
74 PLN00181 protein SPA1-RELATED; 99.8 5.6E-18 1.2E-22 122.4 18.2 122 12-136 481-614 (793)
75 KOG0292|consensus 99.8 3.2E-19 6.9E-24 124.9 10.2 122 14-137 9-132 (1202)
76 KOG0302|consensus 99.8 3.9E-19 8.4E-24 114.2 9.7 129 2-131 201-335 (440)
77 KOG1407|consensus 99.8 2.5E-18 5.5E-23 105.9 12.8 122 15-138 148-271 (313)
78 KOG0264|consensus 99.8 1.4E-18 3.1E-23 113.3 12.0 119 10-128 268-404 (422)
79 KOG2110|consensus 99.8 1E-17 2.2E-22 107.4 15.5 129 3-131 117-251 (391)
80 KOG0640|consensus 99.8 5.7E-19 1.2E-23 111.4 9.7 123 12-134 110-252 (430)
81 KOG0643|consensus 99.8 6.6E-18 1.4E-22 104.5 14.1 127 10-137 48-229 (327)
82 KOG1446|consensus 99.8 3.3E-17 7.1E-22 103.0 17.3 131 5-137 93-271 (311)
83 KOG0274|consensus 99.8 7.7E-18 1.7E-22 116.0 15.9 122 10-137 245-368 (537)
84 KOG0289|consensus 99.8 6.8E-18 1.5E-22 110.2 14.5 112 17-129 350-463 (506)
85 KOG1034|consensus 99.8 2.3E-18 5.1E-23 109.0 11.3 126 4-130 79-213 (385)
86 KOG1273|consensus 99.8 3.9E-18 8.4E-23 107.7 12.1 122 17-138 26-193 (405)
87 KOG0305|consensus 99.8 2.2E-18 4.9E-23 115.9 11.2 122 13-136 259-384 (484)
88 KOG0306|consensus 99.8 5.1E-18 1.1E-22 117.0 12.3 121 8-130 544-666 (888)
89 KOG0274|consensus 99.8 1.2E-17 2.7E-22 115.0 14.0 122 9-135 286-408 (537)
90 KOG1274|consensus 99.8 9.9E-18 2.1E-22 117.4 13.1 124 6-129 130-263 (933)
91 KOG0306|consensus 99.8 5.6E-18 1.2E-22 116.8 11.6 121 14-136 65-187 (888)
92 KOG1445|consensus 99.8 1.1E-18 2.4E-23 119.0 8.1 117 14-132 627-754 (1012)
93 KOG0646|consensus 99.8 1.8E-17 3.9E-22 108.8 13.3 123 14-138 81-216 (476)
94 KOG0278|consensus 99.8 1.9E-17 4.1E-22 101.9 12.5 122 10-132 139-301 (334)
95 KOG0639|consensus 99.8 8.5E-19 1.8E-23 116.5 7.1 115 22-138 475-591 (705)
96 KOG0772|consensus 99.8 6.2E-18 1.4E-22 112.6 10.2 130 10-139 313-456 (641)
97 KOG1446|consensus 99.8 2E-16 4.3E-21 99.6 15.9 132 2-137 4-139 (311)
98 KOG0300|consensus 99.8 1.4E-17 3E-22 105.7 10.7 121 9-131 267-389 (481)
99 KOG2111|consensus 99.8 1.3E-16 2.7E-21 100.8 14.8 128 4-131 126-259 (346)
100 KOG1407|consensus 99.8 2.6E-17 5.6E-22 101.6 11.5 116 10-128 185-311 (313)
101 KOG0270|consensus 99.8 1.3E-17 2.9E-22 108.9 10.0 127 8-137 237-370 (463)
102 KOG0313|consensus 99.8 5.7E-17 1.2E-21 104.3 12.4 117 11-131 190-333 (423)
103 KOG4283|consensus 99.7 4.4E-17 9.6E-22 102.3 11.0 110 23-133 157-281 (397)
104 KOG0305|consensus 99.7 4.3E-17 9.4E-22 109.8 11.6 120 14-136 217-339 (484)
105 KOG1332|consensus 99.7 5.7E-17 1.2E-21 99.3 10.3 119 12-130 9-136 (299)
106 KOG0647|consensus 99.7 1.4E-16 3.1E-21 100.0 12.3 116 12-133 70-189 (347)
107 KOG1539|consensus 99.7 4.9E-16 1.1E-20 108.3 15.8 125 14-138 450-616 (910)
108 KOG2048|consensus 99.7 1.7E-15 3.7E-20 103.5 17.8 125 12-136 67-192 (691)
109 KOG0646|consensus 99.7 2E-16 4.3E-21 104.0 12.9 125 11-135 120-314 (476)
110 KOG0641|consensus 99.7 6.5E-16 1.4E-20 94.2 14.0 117 11-129 180-304 (350)
111 KOG0269|consensus 99.7 2.7E-17 5.9E-22 113.6 8.8 117 13-130 175-298 (839)
112 KOG2394|consensus 99.7 7.3E-17 1.6E-21 107.9 10.5 120 14-135 219-369 (636)
113 KOG0308|consensus 99.7 3.8E-16 8.1E-21 106.5 13.8 117 12-130 169-287 (735)
114 PF08662 eIF2A: Eukaryotic tra 99.7 1.5E-15 3.2E-20 93.0 15.2 116 15-138 60-188 (194)
115 KOG0293|consensus 99.7 1.1E-16 2.4E-21 104.2 10.7 125 2-130 259-386 (519)
116 KOG0288|consensus 99.7 6.2E-16 1.3E-20 100.6 14.0 122 16-138 304-427 (459)
117 KOG0278|consensus 99.7 4.5E-17 9.8E-22 100.2 8.4 131 7-138 7-183 (334)
118 KOG1332|consensus 99.7 2.6E-16 5.7E-21 96.4 10.8 124 7-131 49-196 (299)
119 KOG1539|consensus 99.7 7.2E-16 1.6E-20 107.5 13.8 115 11-128 490-648 (910)
120 KOG1009|consensus 99.7 1.4E-15 3E-20 98.7 14.1 120 15-136 14-161 (434)
121 KOG4283|consensus 99.7 7.1E-16 1.5E-20 97.0 12.4 117 11-130 98-221 (397)
122 KOG0267|consensus 99.7 2.6E-17 5.5E-22 113.2 6.5 121 12-134 110-232 (825)
123 KOG0300|consensus 99.7 1.2E-16 2.7E-21 101.4 8.7 131 2-136 138-310 (481)
124 KOG1063|consensus 99.7 1.8E-16 3.9E-21 108.6 9.8 127 3-130 516-650 (764)
125 KOG0299|consensus 99.7 1.5E-16 3.3E-21 104.4 8.9 124 12-137 200-365 (479)
126 KOG0303|consensus 99.7 6.1E-16 1.3E-20 100.3 11.4 118 12-131 129-252 (472)
127 KOG0973|consensus 99.7 1.8E-15 4E-20 107.6 14.5 131 2-135 119-319 (942)
128 KOG0288|consensus 99.7 2.2E-15 4.9E-20 98.0 13.4 110 16-125 345-458 (459)
129 KOG1036|consensus 99.7 2.2E-15 4.8E-20 94.8 12.9 117 12-134 52-169 (323)
130 KOG2445|consensus 99.7 1.3E-14 2.7E-19 91.7 15.5 120 12-133 11-149 (361)
131 KOG0649|consensus 99.7 6.8E-15 1.5E-19 90.5 13.9 121 17-138 119-245 (325)
132 KOG2096|consensus 99.7 7.2E-16 1.6E-20 97.8 9.8 123 2-126 218-400 (420)
133 KOG0301|consensus 99.7 4E-15 8.7E-20 102.1 13.9 114 11-130 176-290 (745)
134 KOG0299|consensus 99.7 8.6E-16 1.9E-20 100.9 10.3 76 10-85 240-317 (479)
135 KOG0294|consensus 99.7 2E-15 4.3E-20 95.4 10.6 113 12-128 81-197 (362)
136 KOG2394|consensus 99.7 1.1E-15 2.4E-20 102.4 9.8 90 16-107 292-383 (636)
137 KOG0301|consensus 99.7 4.8E-15 1E-19 101.7 12.9 113 10-128 136-249 (745)
138 KOG0268|consensus 99.7 6.9E-16 1.5E-20 99.1 8.4 118 15-133 188-350 (433)
139 KOG2110|consensus 99.7 3E-14 6.4E-19 91.7 14.9 122 13-137 86-213 (391)
140 KOG1274|consensus 99.6 7.9E-15 1.7E-19 103.2 13.2 122 16-137 98-227 (933)
141 KOG1036|consensus 99.6 1E-14 2.2E-19 91.9 12.3 112 14-130 13-126 (323)
142 KOG0268|consensus 99.6 1.8E-15 3.9E-20 97.2 8.7 126 11-138 63-228 (433)
143 KOG0322|consensus 99.6 5.7E-15 1.2E-19 91.6 10.3 113 13-127 149-322 (323)
144 KOG0649|consensus 99.6 2E-14 4.3E-19 88.5 12.5 128 7-137 55-195 (325)
145 KOG0771|consensus 99.6 2.1E-14 4.5E-19 93.5 13.1 120 16-136 148-319 (398)
146 KOG1273|consensus 99.6 1.9E-15 4E-20 95.8 8.1 81 57-139 26-106 (405)
147 TIGR03866 PQQ_ABC_repeats PQQ- 99.6 1.7E-13 3.7E-18 88.7 17.4 118 18-138 162-289 (300)
148 KOG3881|consensus 99.6 9.1E-15 2E-19 94.6 11.1 120 15-135 203-327 (412)
149 KOG1310|consensus 99.6 3.8E-15 8.3E-20 100.4 9.3 120 9-130 45-180 (758)
150 KOG2096|consensus 99.6 1.6E-14 3.4E-19 91.9 11.4 115 13-128 186-308 (420)
151 KOG0290|consensus 99.6 2.9E-14 6.3E-19 89.6 12.0 119 12-130 148-320 (364)
152 KOG0639|consensus 99.6 1.6E-15 3.4E-20 101.3 6.7 122 15-136 512-671 (705)
153 KOG0642|consensus 99.6 1.1E-14 2.5E-19 97.8 10.5 119 13-132 293-430 (577)
154 TIGR03866 PQQ_ABC_repeats PQQ- 99.6 1.5E-13 3.3E-18 88.9 15.6 109 24-136 1-111 (300)
155 KOG1009|consensus 99.6 1.8E-14 3.9E-19 93.6 10.7 125 11-137 62-204 (434)
156 KOG0321|consensus 99.6 9.9E-15 2.1E-19 99.5 10.0 123 11-134 97-254 (720)
157 KOG1408|consensus 99.6 1.9E-14 4.2E-19 99.8 11.4 111 17-129 601-714 (1080)
158 KOG1445|consensus 99.6 3E-15 6.5E-20 102.6 6.7 118 12-129 675-799 (1012)
159 KOG0270|consensus 99.6 6.8E-15 1.5E-19 96.5 7.9 105 23-129 191-318 (463)
160 KOG0641|consensus 99.6 2.1E-13 4.6E-18 83.3 13.8 112 16-128 235-349 (350)
161 KOG1007|consensus 99.6 2.4E-14 5.3E-19 89.9 9.6 115 14-131 123-248 (370)
162 KOG0644|consensus 99.6 7.7E-16 1.7E-20 107.8 3.0 111 12-128 188-300 (1113)
163 KOG1188|consensus 99.6 4.7E-14 1E-18 90.1 10.3 118 12-130 68-198 (376)
164 KOG2919|consensus 99.6 5.4E-14 1.2E-18 89.5 10.5 115 14-129 207-328 (406)
165 KOG4227|consensus 99.6 1.7E-13 3.6E-18 89.6 12.2 120 12-131 54-182 (609)
166 KOG1408|consensus 99.6 5.7E-14 1.2E-18 97.5 10.0 123 15-137 462-635 (1080)
167 KOG0642|consensus 99.5 3.7E-13 8.1E-18 90.7 12.5 81 4-84 334-426 (577)
168 KOG4328|consensus 99.5 1E-13 2.2E-18 91.5 9.5 121 7-128 227-399 (498)
169 KOG1523|consensus 99.5 1.6E-13 3.5E-18 87.1 10.0 125 2-127 45-175 (361)
170 KOG2048|consensus 99.5 7.8E-13 1.7E-17 90.8 14.0 122 15-137 113-242 (691)
171 KOG2106|consensus 99.5 8.4E-13 1.8E-17 88.4 13.4 117 15-136 247-404 (626)
172 KOG2055|consensus 99.5 6.4E-13 1.4E-17 87.9 12.7 110 18-129 309-418 (514)
173 KOG0307|consensus 99.5 1E-14 2.2E-19 104.5 4.5 122 15-136 65-200 (1049)
174 KOG4378|consensus 99.5 4.3E-13 9.3E-18 89.8 11.8 125 11-136 118-247 (673)
175 KOG4378|consensus 99.5 4.6E-13 1E-17 89.6 11.8 107 23-132 176-284 (673)
176 KOG2106|consensus 99.5 4.8E-12 1E-16 84.9 15.7 106 22-130 417-523 (626)
177 KOG1007|consensus 99.5 2.8E-13 6.1E-18 85.2 9.0 106 23-131 183-292 (370)
178 KOG1523|consensus 99.5 2.2E-12 4.8E-17 82.1 12.7 116 13-129 9-131 (361)
179 KOG1034|consensus 99.5 1.1E-13 2.4E-18 88.2 6.6 113 12-127 133-278 (385)
180 KOG1188|consensus 99.5 7.6E-13 1.6E-17 84.7 9.8 108 25-132 41-155 (376)
181 KOG1063|consensus 99.5 8.5E-13 1.9E-17 91.0 10.6 119 10-128 568-699 (764)
182 KOG0974|consensus 99.5 6.9E-13 1.5E-17 94.6 9.8 118 9-130 170-290 (967)
183 KOG1272|consensus 99.5 1.1E-13 2.3E-18 91.7 5.3 119 16-136 211-331 (545)
184 KOG2445|consensus 99.5 1.5E-12 3.2E-17 82.5 10.0 113 13-128 168-318 (361)
185 KOG0321|consensus 99.5 5.6E-13 1.2E-17 91.2 8.5 108 23-131 63-178 (720)
186 KOG3914|consensus 99.4 1.5E-12 3.3E-17 84.7 9.9 104 32-138 130-233 (390)
187 KOG1272|consensus 99.4 1.8E-13 3.8E-18 90.7 5.4 109 13-126 252-360 (545)
188 KOG1963|consensus 99.4 5.2E-12 1.1E-16 88.8 12.7 112 16-130 209-324 (792)
189 PF08662 eIF2A: Eukaryotic tra 99.4 2.5E-11 5.5E-16 74.5 14.4 97 35-136 38-141 (194)
190 KOG0307|consensus 99.4 3.1E-13 6.7E-18 97.1 6.6 123 13-137 160-293 (1049)
191 COG2319 FOG: WD40 repeat [Gene 99.4 6.4E-11 1.4E-15 78.9 17.3 120 10-132 151-275 (466)
192 KOG0322|consensus 99.4 4.8E-13 1E-17 83.2 6.3 67 17-83 256-322 (323)
193 KOG2055|consensus 99.4 9.9E-12 2.1E-16 82.4 12.5 126 9-137 254-383 (514)
194 PF02239 Cytochrom_D1: Cytochr 99.4 3.2E-11 6.9E-16 80.7 15.2 108 27-137 9-117 (369)
195 KOG1240|consensus 99.4 8.8E-12 1.9E-16 90.8 12.8 127 11-137 1045-1234(1431)
196 KOG1538|consensus 99.4 1.6E-11 3.5E-16 85.2 13.0 109 18-127 18-161 (1081)
197 KOG4328|consensus 99.4 7.7E-12 1.7E-16 82.8 10.8 120 16-135 324-457 (498)
198 KOG1587|consensus 99.4 2.5E-12 5.4E-17 89.0 8.8 117 12-129 396-517 (555)
199 KOG0650|consensus 99.4 1.8E-11 3.9E-16 83.6 12.3 65 2-67 388-454 (733)
200 KOG2111|consensus 99.4 8.8E-11 1.9E-15 74.8 13.6 77 9-85 176-257 (346)
201 KOG2139|consensus 99.4 4.8E-11 1E-15 77.4 12.1 107 8-117 190-299 (445)
202 KOG2321|consensus 99.3 2.2E-11 4.8E-16 82.9 10.5 132 4-137 167-311 (703)
203 KOG1524|consensus 99.3 1.4E-11 3E-16 83.4 8.7 113 12-128 102-216 (737)
204 COG2319 FOG: WD40 repeat [Gene 99.3 7E-10 1.5E-14 73.9 16.5 112 21-134 119-235 (466)
205 KOG2919|consensus 99.3 9E-11 1.9E-15 75.2 11.3 112 17-131 163-284 (406)
206 KOG2695|consensus 99.3 1.8E-11 3.9E-16 78.9 8.2 121 16-138 254-386 (425)
207 KOG0650|consensus 99.3 8.8E-12 1.9E-16 85.1 7.0 110 15-125 610-732 (733)
208 KOG2139|consensus 99.3 1.3E-10 2.8E-15 75.4 11.4 109 16-128 142-268 (445)
209 KOG1310|consensus 99.3 2.2E-11 4.7E-16 82.7 8.2 82 47-129 43-126 (758)
210 KOG0974|consensus 99.3 1.8E-10 4E-15 82.6 12.4 103 23-128 144-246 (967)
211 KOG0771|consensus 99.3 9.1E-11 2E-15 76.9 9.7 117 11-129 183-355 (398)
212 KOG1524|consensus 99.3 1.1E-10 2.5E-15 79.2 10.2 104 6-125 178-283 (737)
213 KOG0280|consensus 99.2 5.6E-10 1.2E-14 70.7 12.2 112 23-135 132-249 (339)
214 PF00400 WD40: WD domain, G-be 99.2 3.7E-11 8E-16 54.7 5.3 38 45-82 2-39 (39)
215 KOG2321|consensus 99.2 2.6E-10 5.5E-15 77.9 11.1 112 23-135 145-265 (703)
216 PF02239 Cytochrom_D1: Cytochr 99.2 5.7E-09 1.2E-13 70.0 17.4 131 3-134 27-164 (369)
217 KOG4227|consensus 99.2 4E-10 8.6E-15 74.2 11.4 123 9-131 100-228 (609)
218 PRK11028 6-phosphogluconolacto 99.2 7E-09 1.5E-13 68.7 16.6 110 18-129 85-206 (330)
219 KOG1517|consensus 99.2 7.3E-10 1.6E-14 80.4 12.5 115 14-129 1208-1334(1387)
220 KOG4547|consensus 99.2 2.1E-09 4.5E-14 73.3 13.8 111 23-137 69-181 (541)
221 PRK11028 6-phosphogluconolacto 99.2 7.8E-09 1.7E-13 68.4 15.9 112 17-130 39-158 (330)
222 KOG0280|consensus 99.2 3.4E-10 7.4E-15 71.6 8.6 97 12-111 163-266 (339)
223 KOG4547|consensus 99.2 3.8E-09 8.2E-14 72.1 13.5 123 3-129 91-221 (541)
224 KOG0290|consensus 99.2 1.8E-09 3.8E-14 68.5 11.1 118 12-132 94-231 (364)
225 KOG1538|consensus 99.1 3.3E-09 7.2E-14 74.1 13.0 118 11-128 50-211 (1081)
226 PRK05137 tolB translocation pr 99.1 1.9E-08 4.1E-13 69.0 16.3 116 14-133 201-327 (435)
227 KOG3881|consensus 99.1 2.5E-09 5.5E-14 69.9 10.7 111 23-135 160-284 (412)
228 PF11768 DUF3312: Protein of u 99.1 5.6E-08 1.2E-12 66.8 16.8 76 52-131 257-332 (545)
229 PF00400 WD40: WD domain, G-be 99.1 1.5E-09 3.2E-14 49.2 6.5 38 87-126 2-39 (39)
230 PRK01742 tolB translocation pr 99.1 1.1E-08 2.4E-13 70.1 13.2 107 19-129 210-323 (429)
231 PRK03629 tolB translocation pr 99.1 5.9E-08 1.3E-12 66.6 16.6 111 18-132 204-323 (429)
232 COG4946 Uncharacterized protei 99.1 6.6E-08 1.4E-12 65.4 16.1 110 23-135 370-484 (668)
233 KOG1587|consensus 99.1 2.4E-09 5.2E-14 74.6 9.7 117 16-134 349-478 (555)
234 KOG2041|consensus 99.0 2.3E-09 5E-14 75.4 9.2 116 13-128 13-145 (1189)
235 KOG1409|consensus 99.0 2.6E-09 5.7E-14 69.0 8.4 77 8-84 191-270 (404)
236 KOG1517|consensus 99.0 8.6E-09 1.9E-13 75.1 11.5 107 23-130 1176-1289(1387)
237 KOG1963|consensus 99.0 1.6E-08 3.5E-13 71.8 12.5 126 12-138 249-385 (792)
238 PRK01742 tolB translocation pr 99.0 1.4E-08 3E-13 69.6 11.9 96 33-132 183-284 (429)
239 KOG4190|consensus 99.0 1.5E-09 3.2E-14 74.5 6.4 134 3-138 724-869 (1034)
240 TIGR02658 TTQ_MADH_Hv methylam 99.0 2.3E-07 5.1E-12 61.7 16.2 114 23-138 11-146 (352)
241 PRK04922 tolB translocation pr 99.0 9E-08 1.9E-12 65.7 14.7 114 16-133 205-329 (433)
242 KOG2315|consensus 99.0 2.3E-08 4.9E-13 68.2 11.4 114 14-135 270-396 (566)
243 PRK04922 tolB translocation pr 98.9 2E-07 4.3E-12 64.1 15.0 111 19-133 254-373 (433)
244 PRK02889 tolB translocation pr 98.9 1.5E-07 3.3E-12 64.5 14.4 109 19-131 202-319 (427)
245 PRK05137 tolB translocation pr 98.9 1.4E-07 3E-12 64.8 14.2 96 34-133 182-283 (435)
246 PRK03629 tolB translocation pr 98.9 2.6E-07 5.7E-12 63.4 15.4 112 18-133 248-368 (429)
247 PLN02919 haloacid dehalogenase 98.9 4.4E-07 9.6E-12 68.3 17.4 114 19-132 746-892 (1057)
248 KOG1064|consensus 98.9 1.4E-09 3E-14 82.6 4.3 114 11-136 2289-2406(2439)
249 KOG1064|consensus 98.9 3E-09 6.4E-14 80.9 5.7 128 4-136 2242-2374(2439)
250 PRK02889 tolB translocation pr 98.9 2.4E-07 5.3E-12 63.5 14.6 113 18-133 245-365 (427)
251 TIGR02800 propeller_TolB tol-p 98.9 3.7E-07 8.1E-12 62.3 15.5 110 20-133 197-315 (417)
252 KOG4497|consensus 98.9 1.4E-08 2.9E-13 65.7 7.8 115 15-133 11-127 (447)
253 KOG1240|consensus 98.9 4.3E-07 9.3E-12 67.4 16.1 125 12-137 1098-1282(1431)
254 KOG1409|consensus 98.9 2.6E-08 5.6E-13 64.6 8.9 105 26-131 167-273 (404)
255 PRK00178 tolB translocation pr 98.9 4.3E-07 9.4E-12 62.3 15.5 111 19-133 205-324 (430)
256 KOG1334|consensus 98.9 1.8E-08 3.9E-13 67.9 7.9 125 9-134 137-269 (559)
257 KOG2066|consensus 98.9 2.4E-07 5.3E-12 65.9 13.3 109 23-137 82-196 (846)
258 PF10282 Lactonase: Lactonase, 98.8 5.5E-06 1.2E-10 55.4 18.8 111 17-128 91-222 (345)
259 PRK01029 tolB translocation pr 98.8 5.3E-07 1.2E-11 61.9 13.9 115 18-135 286-410 (428)
260 COG2706 3-carboxymuconate cycl 98.8 2.1E-06 4.5E-11 56.1 15.4 122 9-130 85-223 (346)
261 KOG4714|consensus 98.8 3.7E-08 7.9E-13 61.8 7.1 105 19-126 186-316 (319)
262 PF11768 DUF3312: Protein of u 98.8 4.5E-07 9.8E-12 62.6 12.7 70 13-84 258-329 (545)
263 KOG4532|consensus 98.8 6E-07 1.3E-11 56.8 12.1 105 27-132 131-237 (344)
264 PRK04792 tolB translocation pr 98.8 1.3E-06 2.8E-11 60.4 14.7 111 19-133 224-343 (448)
265 TIGR02658 TTQ_MADH_Hv methylam 98.8 4E-06 8.6E-11 55.9 16.0 110 23-136 205-338 (352)
266 KOG4714|consensus 98.8 1.1E-08 2.5E-13 64.0 3.9 74 55-129 180-255 (319)
267 TIGR02800 propeller_TolB tol-p 98.8 2.2E-06 4.7E-11 58.5 15.3 110 19-132 240-358 (417)
268 PRK01029 tolB translocation pr 98.7 2.8E-06 6E-11 58.4 14.9 115 18-134 236-365 (428)
269 KOG4497|consensus 98.7 6.5E-07 1.4E-11 58.2 10.6 97 18-117 52-152 (447)
270 KOG0309|consensus 98.7 9.3E-08 2E-12 67.8 7.1 126 6-133 106-237 (1081)
271 KOG3914|consensus 98.7 6.3E-08 1.4E-12 63.7 5.6 81 11-92 148-231 (390)
272 KOG4532|consensus 98.7 7E-06 1.5E-10 52.1 14.3 117 21-137 167-291 (344)
273 KOG0644|consensus 98.7 1.2E-07 2.5E-12 68.0 7.1 107 26-134 367-474 (1113)
274 KOG4640|consensus 98.7 4E-07 8.6E-12 63.3 9.3 80 55-136 21-100 (665)
275 PRK00178 tolB translocation pr 98.6 2.8E-06 6.1E-11 58.4 13.5 95 35-133 180-280 (430)
276 KOG1354|consensus 98.6 1.4E-06 3E-11 57.0 10.8 113 15-129 26-194 (433)
277 KOG1275|consensus 98.6 3.1E-07 6.6E-12 66.4 8.5 121 2-126 207-340 (1118)
278 KOG4190|consensus 98.6 2.1E-07 4.5E-12 64.4 7.0 128 6-135 776-913 (1034)
279 KOG1912|consensus 98.6 7.5E-07 1.6E-11 63.6 9.5 127 8-137 9-152 (1062)
280 COG4946 Uncharacterized protei 98.6 5.6E-06 1.2E-10 56.4 13.1 96 19-117 408-507 (668)
281 KOG3621|consensus 98.6 9E-07 2E-11 62.3 9.5 116 14-129 35-155 (726)
282 PRK04792 tolB translocation pr 98.6 9.7E-06 2.1E-10 56.1 14.3 112 18-133 267-387 (448)
283 PF15492 Nbas_N: Neuroblastoma 98.6 2.6E-05 5.7E-10 49.8 14.6 84 54-137 147-268 (282)
284 KOG4640|consensus 98.5 9.7E-07 2.1E-11 61.5 8.8 91 15-107 23-114 (665)
285 PF13360 PQQ_2: PQQ-like domai 98.5 4.2E-06 9.1E-11 52.8 11.0 114 23-138 35-150 (238)
286 KOG1832|consensus 98.5 5.8E-08 1.3E-12 70.2 2.7 119 12-135 1099-1221(1516)
287 TIGR03300 assembly_YfgL outer 98.5 1.3E-05 2.8E-10 54.2 13.3 109 23-138 240-348 (377)
288 KOG1354|consensus 98.5 4.3E-06 9.2E-11 54.7 10.1 125 11-137 161-311 (433)
289 TIGR03300 assembly_YfgL outer 98.5 1.9E-05 4.2E-10 53.4 13.8 108 23-137 64-172 (377)
290 PF10282 Lactonase: Lactonase, 98.5 0.00011 2.4E-09 49.2 18.9 117 15-131 39-177 (345)
291 KOG1645|consensus 98.5 1.8E-06 4E-11 57.3 7.9 94 36-132 175-270 (463)
292 smart00320 WD40 WD40 repeats. 98.4 1.5E-06 3.2E-11 38.1 5.5 38 45-82 3-40 (40)
293 PRK04043 tolB translocation pr 98.4 0.00019 4.1E-09 49.4 17.1 112 18-133 193-314 (419)
294 KOG3617|consensus 98.4 1.5E-06 3.2E-11 62.9 6.7 112 14-129 17-132 (1416)
295 PLN02919 haloacid dehalogenase 98.4 9.6E-05 2.1E-09 56.2 16.3 114 19-133 689-838 (1057)
296 KOG2315|consensus 98.4 2.1E-05 4.6E-10 54.3 11.5 99 33-137 250-353 (566)
297 PF04762 IKI3: IKI3 family; I 98.3 3.8E-05 8.2E-10 57.5 13.1 114 16-132 211-337 (928)
298 KOG2695|consensus 98.3 2.9E-06 6.3E-11 55.5 5.8 100 28-132 228-333 (425)
299 PF13360 PQQ_2: PQQ-like domai 98.3 0.00025 5.5E-09 44.7 15.8 107 23-135 121-237 (238)
300 PRK04043 tolB translocation pr 98.3 0.0003 6.6E-09 48.5 15.6 111 17-133 237-362 (419)
301 KOG2314|consensus 98.3 3.4E-05 7.4E-10 53.6 10.7 112 15-130 213-336 (698)
302 KOG1334|consensus 98.2 9.3E-07 2E-11 59.9 2.6 78 8-85 387-467 (559)
303 KOG1275|consensus 98.2 2.6E-05 5.7E-10 56.9 9.1 106 23-134 146-260 (1118)
304 KOG2066|consensus 98.2 1.3E-05 2.7E-10 57.6 7.4 99 15-125 40-143 (846)
305 smart00320 WD40 WD40 repeats. 98.2 2E-05 4.2E-10 34.2 5.9 27 100-126 14-40 (40)
306 PRK02888 nitrous-oxide reducta 98.2 0.00049 1.1E-08 49.2 15.0 93 33-129 295-405 (635)
307 KOG2314|consensus 98.2 1.5E-05 3.3E-10 55.2 7.5 76 57-137 213-299 (698)
308 PF03178 CPSF_A: CPSF A subuni 98.2 0.00064 1.4E-08 45.2 15.1 113 12-128 86-202 (321)
309 KOG4649|consensus 98.1 0.00029 6.4E-09 45.0 12.2 111 23-137 22-132 (354)
310 KOG2079|consensus 98.1 4.9E-05 1.1E-09 56.4 9.4 111 16-128 91-203 (1206)
311 KOG1912|consensus 98.1 0.00011 2.3E-09 53.2 10.6 100 26-127 81-185 (1062)
312 PF12894 Apc4_WD40: Anaphase-p 98.1 2.6E-05 5.7E-10 36.5 5.3 34 99-133 12-45 (47)
313 KOG0882|consensus 98.0 6.5E-05 1.4E-09 51.0 8.6 108 29-136 117-239 (558)
314 COG5170 CDC55 Serine/threonine 98.0 7.2E-05 1.6E-09 48.8 8.5 115 13-129 25-202 (460)
315 PF08450 SGL: SMP-30/Gluconola 98.0 0.001 2.2E-08 42.5 18.1 122 14-138 85-222 (246)
316 PRK11138 outer membrane biogen 98.0 0.00045 9.7E-09 47.2 12.4 109 23-138 255-363 (394)
317 PF08553 VID27: VID27 cytoplas 98.0 0.00041 9E-09 51.0 12.6 120 3-127 515-646 (794)
318 PRK11138 outer membrane biogen 98.0 0.00039 8.4E-09 47.5 12.1 111 23-137 68-187 (394)
319 PF14783 BBS2_Mid: Ciliary BBS 98.0 0.00054 1.2E-08 38.1 14.2 90 25-123 16-109 (111)
320 PF07433 DUF1513: Protein of u 98.0 0.0015 3.2E-08 42.9 15.2 118 19-138 11-156 (305)
321 KOG2114|consensus 98.0 0.00021 4.5E-09 52.1 10.5 109 16-125 27-152 (933)
322 KOG2041|consensus 98.0 2.2E-05 4.8E-10 56.2 5.6 117 10-129 67-187 (1189)
323 KOG0309|consensus 97.9 8.8E-05 1.9E-09 53.4 8.1 108 23-132 80-192 (1081)
324 PF12234 Rav1p_C: RAVE protein 97.9 0.0024 5.3E-08 46.0 15.1 103 23-127 40-155 (631)
325 COG2706 3-carboxymuconate cycl 97.9 0.0021 4.5E-08 42.6 13.0 117 18-134 45-181 (346)
326 KOG1645|consensus 97.9 4.5E-05 9.6E-10 51.0 5.3 74 13-87 192-269 (463)
327 KOG2444|consensus 97.9 0.00014 3.1E-09 45.2 7.1 107 23-130 69-179 (238)
328 PF07433 DUF1513: Protein of u 97.9 0.0021 4.7E-08 42.2 12.8 99 19-117 57-181 (305)
329 COG5354 Uncharacterized protei 97.8 0.00019 4.1E-09 49.4 8.1 95 38-137 16-125 (561)
330 PF14655 RAB3GAP2_N: Rab3 GTPa 97.8 0.00097 2.1E-08 45.8 11.5 88 50-138 303-408 (415)
331 COG5354 Uncharacterized protei 97.8 0.0015 3.1E-08 45.3 12.0 111 14-131 274-398 (561)
332 PF08450 SGL: SMP-30/Gluconola 97.8 0.0027 5.9E-08 40.5 15.3 101 24-129 51-165 (246)
333 KOG1920|consensus 97.8 0.0007 1.5E-08 51.2 10.9 113 19-133 202-327 (1265)
334 PF12894 Apc4_WD40: Anaphase-p 97.8 0.00013 2.8E-09 34.2 4.8 34 54-88 11-44 (47)
335 COG5170 CDC55 Serine/threonine 97.8 0.00029 6.4E-09 46.0 7.6 124 11-136 169-318 (460)
336 cd00216 PQQ_DH Dehydrogenases 97.7 0.0029 6.3E-08 44.6 12.5 106 26-138 303-434 (488)
337 PRK02888 nitrous-oxide reducta 97.7 0.0041 8.8E-08 44.7 12.9 106 23-132 203-355 (635)
338 KOG0882|consensus 97.7 0.00089 1.9E-08 45.8 9.0 124 12-136 142-313 (558)
339 KOG1008|consensus 97.6 1.4E-05 3E-10 56.3 -0.2 113 16-129 58-185 (783)
340 cd00216 PQQ_DH Dehydrogenases 97.5 0.005 1.1E-07 43.5 11.9 113 23-138 60-193 (488)
341 KOG4649|consensus 97.5 0.0092 2E-07 38.5 11.5 83 24-108 63-145 (354)
342 PF08596 Lgl_C: Lethal giant l 97.5 0.016 3.5E-07 39.9 14.2 109 19-128 8-173 (395)
343 PF10168 Nup88: Nuclear pore c 97.4 0.015 3.2E-07 43.0 13.2 76 56-132 86-183 (717)
344 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.4 0.024 5.1E-07 40.6 14.1 60 76-138 441-500 (527)
345 KOG2079|consensus 97.4 0.00042 9E-09 51.8 5.2 72 65-137 98-169 (1206)
346 KOG2114|consensus 97.4 0.026 5.6E-07 41.9 13.8 120 16-137 129-252 (933)
347 PF15390 DUF4613: Domain of un 97.4 0.012 2.6E-07 42.0 11.6 115 15-130 57-188 (671)
348 PF15492 Nbas_N: Neuroblastoma 97.4 0.011 2.4E-07 38.2 10.6 39 54-92 229-267 (282)
349 KOG1832|consensus 97.3 0.00033 7.1E-09 51.8 4.1 83 45-129 1092-1176(1516)
350 KOG3621|consensus 97.3 0.0008 1.7E-08 48.2 5.7 69 17-85 81-155 (726)
351 COG0823 TolB Periplasmic compo 97.3 0.0086 1.9E-07 41.5 10.5 110 18-131 243-361 (425)
352 PF06433 Me-amine-dh_H: Methyl 97.3 0.017 3.8E-07 38.6 11.3 118 12-138 2-136 (342)
353 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.3 0.024 5.2E-07 40.6 12.7 114 23-137 68-198 (527)
354 KOG1008|consensus 97.2 3.4E-05 7.3E-10 54.5 -1.6 111 11-126 99-223 (783)
355 PF04762 IKI3: IKI3 family; I 97.2 0.061 1.3E-06 41.2 16.2 79 54-136 75-157 (928)
356 COG0823 TolB Periplasmic compo 97.2 0.03 6.5E-07 39.0 12.0 95 34-132 218-318 (425)
357 PF00930 DPPIV_N: Dipeptidyl p 97.2 0.0025 5.5E-08 43.0 6.7 84 33-118 22-120 (353)
358 PF04053 Coatomer_WDAD: Coatom 97.1 0.038 8.3E-07 38.6 12.0 55 66-126 117-171 (443)
359 COG3386 Gluconolactonase [Carb 97.1 0.039 8.5E-07 36.7 13.2 99 38-138 145-252 (307)
360 PF06433 Me-amine-dh_H: Methyl 97.1 0.016 3.4E-07 38.8 9.5 58 77-137 270-329 (342)
361 PRK13616 lipoprotein LpqB; Pro 96.9 0.031 6.7E-07 40.5 10.7 97 19-124 356-472 (591)
362 TIGR03074 PQQ_membr_DH membran 96.9 0.11 2.3E-06 39.0 14.2 115 23-137 193-353 (764)
363 PF02897 Peptidase_S9_N: Proly 96.9 0.075 1.6E-06 36.7 13.7 111 18-130 129-262 (414)
364 PF10313 DUF2415: Uncharacteri 96.9 0.011 2.4E-07 27.0 5.5 30 101-130 3-35 (43)
365 PF06977 SdiA-regulated: SdiA- 96.9 0.044 9.5E-07 35.3 10.0 78 50-129 17-95 (248)
366 COG3391 Uncharacterized conser 96.8 0.079 1.7E-06 36.4 16.7 118 17-135 120-246 (381)
367 PF14783 BBS2_Mid: Ciliary BBS 96.8 0.03 6.6E-07 31.3 9.9 64 57-126 2-69 (111)
368 PF05096 Glu_cyclase_2: Glutam 96.8 0.063 1.4E-06 34.8 17.8 110 23-138 55-167 (264)
369 PF08553 VID27: VID27 cytoplas 96.8 0.0072 1.6E-07 44.8 6.7 67 16-83 579-646 (794)
370 KOG2395|consensus 96.8 0.042 9E-07 38.9 9.8 96 28-127 398-499 (644)
371 KOG3617|consensus 96.7 0.0024 5.3E-08 47.2 4.1 66 19-84 66-131 (1416)
372 PF04053 Coatomer_WDAD: Coatom 96.7 0.053 1.2E-06 38.0 10.0 55 24-82 117-171 (443)
373 PF00780 CNH: CNH domain; Int 96.6 0.091 2E-06 34.1 12.5 103 23-130 6-124 (275)
374 PF12234 Rav1p_C: RAVE protein 96.6 0.13 2.9E-06 37.5 11.8 71 56-127 31-103 (631)
375 COG3490 Uncharacterized protei 96.6 0.078 1.7E-06 34.8 9.6 98 19-116 120-243 (366)
376 PF11715 Nup160: Nucleoporin N 96.6 0.053 1.2E-06 38.9 9.7 75 64-138 156-258 (547)
377 KOG1920|consensus 96.5 0.17 3.8E-06 39.2 12.3 68 55-125 69-136 (1265)
378 COG3204 Uncharacterized protei 96.5 0.073 1.6E-06 35.0 9.2 81 52-133 83-163 (316)
379 PF14870 PSII_BNR: Photosynthe 96.4 0.14 3.1E-06 34.0 14.6 104 15-119 145-253 (302)
380 PRK13616 lipoprotein LpqB; Pro 96.4 0.14 2.9E-06 37.4 10.9 70 54-126 447-523 (591)
381 PF08596 Lgl_C: Lethal giant l 96.4 0.19 4E-06 34.8 11.5 81 56-138 3-125 (395)
382 PF07569 Hira: TUP1-like enhan 96.3 0.087 1.9E-06 33.3 8.7 71 16-87 14-98 (219)
383 PF05096 Glu_cyclase_2: Glutam 96.2 0.17 3.7E-06 32.9 17.2 112 23-138 99-213 (264)
384 COG3391 Uncharacterized conser 96.2 0.23 4.9E-06 34.2 15.3 110 20-133 81-195 (381)
385 PF04841 Vps16_N: Vps16, N-ter 96.2 0.25 5.4E-06 34.4 16.1 39 99-137 217-255 (410)
386 PF14583 Pectate_lyase22: Olig 96.0 0.2 4.4E-06 34.3 9.4 98 39-138 15-120 (386)
387 KOG2444|consensus 96.0 0.028 6.1E-07 35.4 5.0 70 16-85 103-178 (238)
388 PF08728 CRT10: CRT10; InterP 95.8 0.52 1.1E-05 35.1 12.4 103 23-127 113-245 (717)
389 COG1520 FOG: WD40-like repeat 95.8 0.36 7.7E-06 33.0 12.3 112 23-137 67-180 (370)
390 PHA02713 hypothetical protein; 95.8 0.15 3.2E-06 36.9 8.7 108 22-133 397-538 (557)
391 PF10313 DUF2415: Uncharacteri 95.7 0.072 1.6E-06 24.4 5.5 31 55-85 1-34 (43)
392 PF07569 Hira: TUP1-like enhan 95.4 0.38 8.1E-06 30.5 8.9 70 63-133 19-100 (219)
393 PF02897 Peptidase_S9_N: Proly 95.4 0.56 1.2E-05 32.5 10.2 71 58-131 127-213 (414)
394 KOG2395|consensus 95.3 0.072 1.6E-06 37.8 5.6 66 17-83 433-499 (644)
395 KOG4441|consensus 95.2 0.81 1.8E-05 33.4 11.6 113 18-134 422-552 (571)
396 KOG3630|consensus 95.2 0.065 1.4E-06 41.3 5.5 88 28-116 172-261 (1405)
397 smart00564 PQQ beta-propeller 95.2 0.089 1.9E-06 22.1 4.1 25 112-136 8-32 (33)
398 COG3490 Uncharacterized protei 95.2 0.55 1.2E-05 31.1 10.0 92 25-118 81-181 (366)
399 PF00930 DPPIV_N: Dipeptidyl p 95.1 0.13 2.8E-06 34.9 6.4 56 75-134 22-77 (353)
400 PF14655 RAB3GAP2_N: Rab3 GTPa 95.0 0.79 1.7E-05 32.0 11.9 78 14-93 309-407 (415)
401 COG3386 Gluconolactonase [Carb 95.0 0.65 1.4E-05 31.1 13.4 91 36-128 87-193 (307)
402 PF03178 CPSF_A: CPSF A subuni 95.0 0.65 1.4E-05 31.1 14.3 111 15-125 130-262 (321)
403 PHA02713 hypothetical protein; 94.9 1 2.2E-05 32.8 12.0 108 22-133 350-494 (557)
404 KOG4460|consensus 94.9 0.4 8.6E-06 34.4 8.2 79 56-134 105-204 (741)
405 PF06977 SdiA-regulated: SdiA- 94.9 0.62 1.4E-05 30.2 16.0 116 11-128 18-147 (248)
406 PF05694 SBP56: 56kDa selenium 94.8 0.93 2E-05 31.8 11.7 114 3-117 233-392 (461)
407 PF04841 Vps16_N: Vps16, N-ter 94.8 0.91 2E-05 31.7 14.7 56 55-111 217-272 (410)
408 PF10647 Gmad1: Lipoprotein Lp 94.8 0.67 1.4E-05 30.0 12.6 108 17-127 28-143 (253)
409 PF00780 CNH: CNH domain; Int 94.7 0.68 1.5E-05 30.1 15.0 115 15-138 139-265 (275)
410 TIGR02276 beta_rpt_yvtn 40-res 94.7 0.16 3.5E-06 22.6 5.0 31 108-138 1-32 (42)
411 TIGR03074 PQQ_membr_DH membran 94.7 1.4 3E-05 33.4 15.2 105 33-137 335-486 (764)
412 KOG4441|consensus 94.7 0.95 2.1E-05 33.1 10.0 109 23-135 332-459 (571)
413 PF01011 PQQ: PQQ enzyme repea 94.7 0.16 3.4E-06 22.4 4.9 27 112-138 2-28 (38)
414 PF11715 Nup160: Nucleoporin N 94.6 0.47 1E-05 34.2 8.4 70 23-92 157-256 (547)
415 PF05694 SBP56: 56kDa selenium 94.3 1.3 2.8E-05 31.2 12.4 99 32-130 220-344 (461)
416 PHA03098 kelch-like protein; P 94.2 1.5 3.2E-05 31.6 11.1 108 22-133 388-516 (534)
417 KOG3630|consensus 94.1 0.28 6E-06 38.2 6.5 97 29-127 119-227 (1405)
418 PF14761 HPS3_N: Hermansky-Pud 94.1 0.89 1.9E-05 28.7 13.5 104 25-131 29-166 (215)
419 KOG1916|consensus 94.0 0.1 2.2E-06 39.5 4.1 108 23-133 194-328 (1283)
420 PHA02790 Kelch-like protein; P 93.1 2.3 5E-05 30.4 11.0 104 22-132 361-474 (480)
421 KOG4499|consensus 93.1 1.6 3.4E-05 28.3 10.2 81 58-138 161-251 (310)
422 TIGR02276 beta_rpt_yvtn 40-res 92.8 0.42 9.2E-06 21.1 6.0 31 64-94 1-32 (42)
423 PF01436 NHL: NHL repeat; Int 92.8 0.33 7.1E-06 19.8 4.2 25 101-125 4-28 (28)
424 PF14781 BBS2_N: Ciliary BBSom 92.3 1.4 2.9E-05 25.7 8.0 72 60-135 4-88 (136)
425 PHA03098 kelch-like protein; P 92.2 3.3 7.1E-05 29.9 10.7 108 22-133 293-419 (534)
426 COG5167 VID27 Protein involved 92.1 0.77 1.7E-05 33.0 5.9 61 23-84 572-632 (776)
427 PF10214 Rrn6: RNA polymerase 92.0 3.1 6.8E-05 31.6 9.3 77 55-132 146-236 (765)
428 PF14781 BBS2_N: Ciliary BBSom 91.9 1.5 3.4E-05 25.5 12.4 108 23-135 9-132 (136)
429 KOG4499|consensus 91.8 2.4 5.3E-05 27.4 10.9 82 26-109 172-264 (310)
430 KOG2377|consensus 91.7 3.3 7.1E-05 29.6 8.4 89 23-111 32-125 (657)
431 TIGR03118 PEPCTERM_chp_1 conse 91.7 2.8 6.2E-05 28.2 8.6 65 71-136 217-287 (336)
432 PF14761 HPS3_N: Hermansky-Pud 91.3 1.7 3.7E-05 27.5 6.2 48 67-117 29-78 (215)
433 KOG1898|consensus 91.2 6.1 0.00013 31.1 9.9 93 14-106 539-640 (1205)
434 PF03088 Str_synth: Strictosid 91.0 1.5 3.3E-05 23.6 6.0 43 29-72 32-74 (89)
435 TIGR02171 Fb_sc_TIGR02171 Fibr 90.9 5.1 0.00011 31.0 9.3 88 23-112 318-412 (912)
436 KOG1896|consensus 90.8 7.2 0.00016 31.2 12.7 112 12-127 1095-1212(1366)
437 PF07676 PD40: WD40-like Beta 90.8 0.78 1.7E-05 20.0 5.3 28 54-81 8-38 (39)
438 PF08728 CRT10: CRT10; InterP 90.8 5.8 0.00012 30.0 11.2 113 14-129 40-196 (717)
439 PRK10115 protease 2; Provision 90.6 5.9 0.00013 29.8 14.0 106 19-127 133-254 (686)
440 TIGR03032 conserved hypothetic 90.6 3.8 8.3E-05 27.7 9.1 69 65-138 212-300 (335)
441 COG5167 VID27 Protein involved 90.5 3.9 8.5E-05 29.6 8.0 61 65-128 572-632 (776)
442 PF10168 Nup88: Nuclear pore c 90.5 6.3 0.00014 29.9 10.0 72 16-87 86-182 (717)
443 PF07250 Glyoxal_oxid_N: Glyox 90.4 2.4 5.1E-05 27.5 6.5 88 36-126 48-146 (243)
444 PHA02790 Kelch-like protein; P 90.3 5.2 0.00011 28.7 10.9 107 23-133 271-389 (480)
445 COG3823 Glutamine cyclotransfe 90.0 3.4 7.4E-05 26.3 6.7 104 32-139 109-215 (262)
446 PRK10115 protease 2; Provision 90.0 3.1 6.8E-05 31.2 7.7 71 56-130 128-209 (686)
447 PF13570 PQQ_3: PQQ-like domai 89.7 1 2.2E-05 19.9 3.4 21 109-129 20-40 (40)
448 KOG1897|consensus 89.4 8.8 0.00019 30.1 12.7 110 14-127 829-941 (1096)
449 COG1520 FOG: WD40-like repeat 89.4 5.2 0.00011 27.4 12.6 110 25-136 112-225 (370)
450 PF01011 PQQ: PQQ enzyme repea 89.4 1.1 2.4E-05 19.6 4.7 27 26-52 2-28 (38)
451 PF14583 Pectate_lyase22: Olig 89.2 5.7 0.00012 27.6 8.9 90 23-114 46-140 (386)
452 PF05935 Arylsulfotrans: Aryls 89.0 6.7 0.00014 28.2 13.9 109 23-136 158-309 (477)
453 PF03088 Str_synth: Strictosid 88.9 2.4 5.2E-05 22.8 6.3 49 71-122 32-81 (89)
454 KOG2280|consensus 88.5 8 0.00017 29.4 8.5 50 34-85 64-113 (829)
455 KOG2109|consensus 88.4 0.85 1.8E-05 33.6 3.7 86 35-121 296-391 (788)
456 PF14727 PHTB1_N: PTHB1 N-term 88.0 7.5 0.00016 27.4 14.0 107 23-129 36-164 (418)
457 PF12341 DUF3639: Protein of u 87.9 1.2 2.6E-05 18.2 3.4 25 16-40 3-27 (27)
458 KOG1897|consensus 87.2 13 0.00028 29.3 15.0 109 21-129 496-614 (1096)
459 COG3823 Glutamine cyclotransfe 86.7 6.2 0.00014 25.2 8.4 106 23-133 55-163 (262)
460 PF12768 Rax2: Cortical protei 86.1 7.9 0.00017 25.7 9.4 96 32-127 14-122 (281)
461 PF10214 Rrn6: RNA polymerase 85.8 14 0.0003 28.4 14.0 104 23-129 157-277 (765)
462 COG4590 ABC-type uncharacteriz 85.8 11 0.00024 27.1 8.4 108 23-134 279-392 (733)
463 PF05935 Arylsulfotrans: Aryls 85.6 11 0.00024 27.1 11.4 111 23-138 114-241 (477)
464 PF14870 PSII_BNR: Photosynthe 85.5 8.8 0.00019 25.8 13.5 71 53-126 143-213 (302)
465 TIGR03118 PEPCTERM_chp_1 conse 85.5 9.1 0.0002 25.9 8.5 72 57-128 25-118 (336)
466 PF12768 Rax2: Cortical protei 84.9 6.1 0.00013 26.3 6.1 54 77-132 17-76 (281)
467 COG3204 Uncharacterized protei 84.7 9.7 0.00021 25.6 11.6 117 13-130 84-212 (316)
468 KOG3616|consensus 84.7 3.5 7.7E-05 31.4 5.3 67 54-125 14-80 (1636)
469 PF07995 GSDH: Glucose / Sorbo 84.1 11 0.00023 25.6 8.4 69 55-123 253-330 (331)
470 PF14269 Arylsulfotran_2: Aryl 83.6 11 0.00024 25.3 7.9 69 57-126 146-218 (299)
471 KOG2103|consensus 83.5 12 0.00026 28.8 7.4 75 56-137 37-112 (910)
472 KOG2247|consensus 83.4 0.064 1.4E-06 37.7 -3.5 107 23-133 45-152 (615)
473 TIGR02604 Piru_Ver_Nterm putat 83.3 12 0.00027 25.7 11.7 62 55-119 124-204 (367)
474 COG5276 Uncharacterized conser 82.8 12 0.00027 25.3 12.1 123 14-137 86-208 (370)
475 KOG2377|consensus 82.2 16 0.00035 26.3 9.2 115 13-130 65-187 (657)
476 KOG2727|consensus 81.9 2.4 5.2E-05 32.8 3.6 80 58-138 325-416 (1244)
477 PF05787 DUF839: Bacterial pro 81.7 11 0.00024 27.5 6.7 23 94-116 497-519 (524)
478 TIGR03054 photo_alph_chp1 puta 80.3 9.5 0.00021 22.4 7.2 68 68-136 43-121 (135)
479 TIGR02604 Piru_Ver_Nterm putat 79.9 17 0.00037 25.1 14.1 100 16-117 15-142 (367)
480 PF12657 TFIIIC_delta: Transcr 79.1 12 0.00026 22.8 9.5 30 100-129 87-122 (173)
481 PF15390 DUF4613: Domain of un 79.1 24 0.00052 26.3 10.0 96 15-117 20-131 (671)
482 TIGR03032 conserved hypothetic 78.7 18 0.00039 24.7 11.6 85 23-112 212-318 (335)
483 KOG1896|consensus 77.9 36 0.00079 27.7 10.8 116 15-137 627-752 (1366)
484 PRK13684 Ycf48-like protein; P 77.8 19 0.00042 24.5 11.9 68 54-123 214-283 (334)
485 PF11635 Med16: Mediator compl 77.8 29 0.00062 26.8 8.1 66 14-79 259-345 (753)
486 KOG2247|consensus 77.3 0.61 1.3E-05 33.2 -0.4 97 15-114 75-175 (615)
487 PF10647 Gmad1: Lipoprotein Lp 77.3 17 0.00037 23.6 11.4 97 23-119 76-186 (253)
488 PF01731 Arylesterase: Arylest 77.1 9.2 0.0002 20.5 6.2 51 74-129 34-85 (86)
489 PF10395 Utp8: Utp8 family; I 76.8 30 0.00066 26.2 12.6 122 14-138 129-269 (670)
490 TIGR02171 Fb_sc_TIGR02171 Fibr 75.8 19 0.0004 28.2 6.6 54 75-130 328-387 (912)
491 TIGR03548 mutarot_permut cycli 75.7 21 0.00046 23.9 12.6 108 22-132 71-198 (323)
492 KOG3611|consensus 75.6 35 0.00075 26.3 10.5 78 46-124 400-489 (737)
493 COG4257 Vgb Streptogramin lyas 75.6 22 0.00047 23.9 10.4 110 21-131 70-189 (353)
494 TIGR03606 non_repeat_PQQ dehyd 75.2 28 0.00061 25.1 13.8 48 19-66 36-90 (454)
495 KOG1900|consensus 74.8 46 0.00099 27.3 9.1 94 24-119 91-199 (1311)
496 PF07995 GSDH: Glucose / Sorbo 74.0 25 0.00054 23.9 14.6 101 17-119 6-134 (331)
497 KOG4460|consensus 74.0 33 0.00072 25.4 8.3 66 22-87 113-201 (741)
498 COG4590 ABC-type uncharacteriz 74.0 25 0.00054 25.5 6.4 63 23-87 327-389 (733)
499 KOG1898|consensus 73.5 46 0.001 26.8 11.8 110 13-127 934-1047(1205)
500 COG3211 PhoX Predicted phospha 72.8 20 0.00044 26.5 5.9 58 58-116 503-571 (616)
No 1
>KOG0271|consensus
Probab=99.95 E-value=1.1e-27 Score=153.39 Aligned_cols=126 Identities=24% Similarity=0.331 Sum_probs=114.4
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
..||..+|.|+.| ++..|++|+.|.++++||+.+..+..+.++|...|.|++|+|||+.+|+|+.||.|++||..+++
T Consensus 111 ~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~ 190 (480)
T KOG0271|consen 111 IAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQ 190 (480)
T ss_pred cCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCC
Confidence 4578899999887 89999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEEEEEeCCCCcceeEEEEcc-----CCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 88 LEKLFKKAHKGTAVNHISIHP-----SGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.+..--..|... |++++|.| ..+++++++.||.++|||+..++.+..+
T Consensus 191 ~~g~~l~gH~K~-It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l 243 (480)
T KOG0271|consen 191 QIGRALRGHKKW-ITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL 243 (480)
T ss_pred cccccccCcccc-eeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe
Confidence 776554667766 99999997 6679999999999999999988877654
No 2
>KOG0286|consensus
Probab=99.95 E-value=3.7e-26 Score=141.88 Aligned_cols=127 Identities=22% Similarity=0.352 Sum_probs=119.2
Q ss_pred EeecceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCCc
Q psy11518 9 VTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 9 ~~~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
...+|.+++.|+.| +...|++++.|.+..+||+++++.+..|.+|.+.|.+++++| +++.+++|+.|+..++||++.+
T Consensus 140 ~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~ 219 (343)
T KOG0286|consen 140 ELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSG 219 (343)
T ss_pred eecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCc
Confidence 35589999999999 889999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
...+.+ ..|... |.+++|.|+|.-+++|++|+..++||+|..+.+..++
T Consensus 220 ~c~qtF-~ghesD-INsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys 268 (343)
T KOG0286|consen 220 QCVQTF-EGHESD-INSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYS 268 (343)
T ss_pred ceeEee-cccccc-cceEEEccCCCeeeecCCCceeEEEeecCCcEEeeec
Confidence 999998 666666 9999999999999999999999999999998887764
No 3
>KOG0272|consensus
Probab=99.95 E-value=1.9e-27 Score=153.32 Aligned_cols=123 Identities=20% Similarity=0.282 Sum_probs=112.5
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
+|...|..+.| +|++|++++.|.+.++||+.++..+....+|...|.+++|.|+|..+++|+.|..-++||++++..+
T Consensus 259 gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~i 338 (459)
T KOG0272|consen 259 GHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCI 338 (459)
T ss_pred cchhhheeeeecCCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEE
Confidence 56666776666 9999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
-.+ ..|... |.+++|+|+|..+++|+.|++++|||++..+.++.+
T Consensus 339 m~L-~gH~k~-I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~i 383 (459)
T KOG0272|consen 339 MFL-AGHIKE-ILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTI 383 (459)
T ss_pred EEe-cccccc-eeeEeECCCceEEeecCCCCcEEEeeecccccceec
Confidence 887 455555 999999999999999999999999999998887665
No 4
>KOG0279|consensus
Probab=99.94 E-value=2e-25 Score=137.74 Aligned_cols=131 Identities=20% Similarity=0.333 Sum_probs=111.5
Q ss_pred eEEEEEeecceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 4 LTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
.++.+..+.|...=..+++++++.++++.|+.+++||+.+++....|.+|...|.+++|+++.+.+++|+.|.+|++|+.
T Consensus 55 ~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt 134 (315)
T KOG0279|consen 55 PVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNT 134 (315)
T ss_pred eeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeee
Confidence 45667766666555566679999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEEEEeCCCCcceeEEEEccC--CcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 84 GSWQLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
............++.. |.+++|+|+ ..+|++++.|+.+++||+++.+....
T Consensus 135 ~g~ck~t~~~~~~~~W-VscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~ 187 (315)
T KOG0279|consen 135 LGVCKYTIHEDSHREW-VSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTT 187 (315)
T ss_pred cccEEEEEecCCCcCc-EEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhc
Confidence 8655555443333555 999999998 67999999999999999998776543
No 5
>KOG0263|consensus
Probab=99.94 E-value=3.3e-26 Score=156.43 Aligned_cols=117 Identities=32% Similarity=0.526 Sum_probs=107.4
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
+|...+.|+.| +..++++|+.|.+|++||+.+|..+..|.+|.++|++++|+|+|++|++|+.|+.|++||+.++...
T Consensus 533 ghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v 612 (707)
T KOG0263|consen 533 GHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLV 612 (707)
T ss_pred ccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcch
Confidence 56666666665 9999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
..+ ..|.+. |.++.|+.+|..|++|+.|..|++||+..-
T Consensus 613 ~~l-~~Ht~t-i~SlsFS~dg~vLasgg~DnsV~lWD~~~~ 651 (707)
T KOG0263|consen 613 KQL-KGHTGT-IYSLSFSRDGNVLASGGADNSVRLWDLTKV 651 (707)
T ss_pred hhh-hcccCc-eeEEEEecCCCEEEecCCCCeEEEEEchhh
Confidence 888 666555 999999999999999999999999998754
No 6
>KOG0263|consensus
Probab=99.94 E-value=7.4e-26 Score=154.75 Aligned_cols=126 Identities=22% Similarity=0.413 Sum_probs=115.6
Q ss_pred EEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
....||..+|.++.| .|-++|+|+.|++-++|......++..+.+|-+.|.|++|+|+..|+++|+.|.++++||+.+
T Consensus 487 V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~ 566 (707)
T KOG0263|consen 487 VIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVST 566 (707)
T ss_pred EEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCC
Confidence 344578888877776 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
+...+.+ .+|++. |.+++|+|+|++|++|++|+.|.+||+.+++++..
T Consensus 567 G~~VRiF-~GH~~~-V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~ 614 (707)
T KOG0263|consen 567 GNSVRIF-TGHKGP-VTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQ 614 (707)
T ss_pred CcEEEEe-cCCCCc-eEEEEEcCCCceEeecccCCcEEEEEcCCCcchhh
Confidence 9999998 677766 99999999999999999999999999999877643
No 7
>PTZ00421 coronin; Provisional
Probab=99.94 E-value=2.3e-24 Score=147.07 Aligned_cols=125 Identities=17% Similarity=0.234 Sum_probs=108.4
Q ss_pred eecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCC-------ceeeEEEecCCCeEEEEECCCC-CEEEEecCCCcE
Q psy11518 10 THSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR-------KQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSI 78 (139)
Q Consensus 10 ~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i 78 (139)
..+|...|.++.| ++++|++|+.|+.|++||+.++ .++..+.+|...|.+++|+|++ ++|++++.|+.|
T Consensus 71 l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtV 150 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVV 150 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEE
Confidence 4578888988887 5789999999999999998764 3567788999999999999975 689999999999
Q ss_pred EEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
++||+.+++....+ ..|... |.+++|+|++.++++++.|+.|++||+++++.+..+
T Consensus 151 rIWDl~tg~~~~~l-~~h~~~-V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl 206 (493)
T PTZ00421 151 NVWDVERGKAVEVI-KCHSDQ-ITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSV 206 (493)
T ss_pred EEEECCCCeEEEEE-cCCCCc-eEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEE
Confidence 99999998877776 445554 999999999999999999999999999998876554
No 8
>KOG0272|consensus
Probab=99.93 E-value=1.1e-25 Score=145.32 Aligned_cols=124 Identities=23% Similarity=0.320 Sum_probs=114.0
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
.||...|.+++| ||.++++|+.|..-+|||+.+++++..+.+|..+|..++|+|+|..+|||+.|+++++||++....
T Consensus 300 EGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ 379 (459)
T KOG0272|consen 300 EGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSE 379 (459)
T ss_pred cccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccccc
Confidence 478888999988 999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred EEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 89 EKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
...+ ..|..- |+.++|+| .|.+|++++.|++++||..++.+++.++
T Consensus 380 ly~i-pAH~nl-VS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksL 426 (459)
T KOG0272|consen 380 LYTI-PAHSNL-VSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSL 426 (459)
T ss_pred ceec-ccccch-hhheEecccCCeEEEEcccCcceeeecCCCcccchhh
Confidence 7777 566655 99999998 8889999999999999999998876543
No 9
>KOG0266|consensus
Probab=99.93 E-value=4.8e-24 Score=145.16 Aligned_cols=120 Identities=29% Similarity=0.517 Sum_probs=110.5
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEc-cCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDM-VKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
.+|...|.++.| +++++++++.|.++++||+ ..+..+.++.+|...|++++|+|+++.+++|+.|+.|++||+++++
T Consensus 200 ~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~ 279 (456)
T KOG0266|consen 200 SGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGE 279 (456)
T ss_pred cccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCe
Confidence 467788888887 9999999999999999999 5558899999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
+...+ ..|... |++++|++++.++++++.|+.|++||+.++..
T Consensus 280 ~~~~l-~~hs~~-is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~ 322 (456)
T KOG0266|consen 280 CVRKL-KGHSDG-ISGLAFSPDGNLLVSASYDGTIRVWDLETGSK 322 (456)
T ss_pred EEEee-eccCCc-eEEEEECCCCCEEEEcCCCccEEEEECCCCce
Confidence 99998 566665 99999999999999999999999999999983
No 10
>KOG0266|consensus
Probab=99.93 E-value=1.6e-23 Score=142.62 Aligned_cols=129 Identities=31% Similarity=0.478 Sum_probs=112.6
Q ss_pred EEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 5 TQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 5 ~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
.++++ +|...++++.| +++++++|+.|++|++||++++++...+.+|...|++++|+++++++++++.|+.|++||
T Consensus 239 ~~~l~--gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd 316 (456)
T KOG0266|consen 239 LKTLK--GHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWD 316 (456)
T ss_pred EEEec--CCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEE
Confidence 34444 78888888887 789999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCceE--EEEEEeCCCCc-ceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 83 VGSWQL--EKLFKKAHKGT-AVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 83 ~~~~~~--~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+.++.. ...+. .+... +++.++|+|++.++++++.|+.+++||++.++.+..+
T Consensus 317 ~~~~~~~~~~~~~-~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~ 372 (456)
T KOG0266|consen 317 LETGSKLCLKLLS-GAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTY 372 (456)
T ss_pred CCCCceeeeeccc-CCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeee
Confidence 999983 44542 22222 5899999999999999999999999999988766554
No 11
>KOG0294|consensus
Probab=99.92 E-value=6.4e-24 Score=133.11 Aligned_cols=136 Identities=57% Similarity=0.888 Sum_probs=124.7
Q ss_pred CeeeEEEEEeecceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCC--EEEEecCCCcE
Q psy11518 1 KYTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS--HLISCSDDGSI 78 (139)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i 78 (139)
++++...|.++.|.+++++++.++.++++|+.|.+|+|||+.....+..+-.|.+.|+++.|.+... .|++|+.||.|
T Consensus 30 ~~~l~~lF~~~aH~~sitavAVs~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i 109 (362)
T KOG0294|consen 30 KPTLKPLFAFSAHAGSITALAVSGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHI 109 (362)
T ss_pred ceeeeccccccccccceeEEEecceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcE
Confidence 3567778888999999999999999999999999999999999999999999999999999998655 89999999999
Q ss_pred EEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.+|+...+.....+ .+|.+. |+.++.+|.+++-++.+.|+.++.||+-+|+.-+..++
T Consensus 110 ~iw~~~~W~~~~sl-K~H~~~-Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L 167 (362)
T KOG0294|consen 110 IIWRVGSWELLKSL-KAHKGQ-VTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNL 167 (362)
T ss_pred EEEEcCCeEEeeee-cccccc-cceeEecCCCceEEEEcCCceeeeehhhcCccceeecc
Confidence 99999999888888 777777 99999999999999999999999999999988776654
No 12
>KOG0279|consensus
Probab=99.92 E-value=1.2e-23 Score=129.92 Aligned_cols=128 Identities=27% Similarity=0.467 Sum_probs=108.8
Q ss_pred EEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEec--CCCeEEEEECCC--CCEEEEecCCCcEEE
Q psy11518 7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQH--EGTITCLKFTPE--GSHLISCSDDGSIAI 80 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~--~~~v~~~~~~~~--~~~l~~~~~d~~i~~ 80 (139)
+.++.+|...|+++++ |...+++|+.|.++++|+.... +..+...+ .+-|+|+.|+|+ ..++++++.|+++++
T Consensus 98 t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~-ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKv 176 (315)
T KOG0279|consen 98 TRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGV-CKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKV 176 (315)
T ss_pred EEEEEecCCceEEEEecCCCceeecCCCcceeeeeeeccc-EEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEE
Confidence 3445577778888776 8999999999999999997554 44444433 788999999997 678999999999999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
||+++.+....+ ..|.+. ++.++++|||.++++|+.||.+.+||++.++.++.+.
T Consensus 177 Wnl~~~~l~~~~-~gh~~~-v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~ 231 (315)
T KOG0279|consen 177 WNLRNCQLRTTF-IGHSGY-VNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE 231 (315)
T ss_pred EccCCcchhhcc-cccccc-EEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc
Confidence 999999888887 666666 9999999999999999999999999999999877653
No 13
>KOG0286|consensus
Probab=99.92 E-value=3e-23 Score=129.03 Aligned_cols=131 Identities=24% Similarity=0.370 Sum_probs=118.3
Q ss_pred EEEEeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 6 QTFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 6 ~~~~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
+.-.+++|.+.|++++. +++.+++|+.|...++||++.+.+.++|.+|++.|+++.|.|+|.-+++|+.|+..++||
T Consensus 178 ~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyD 257 (343)
T KOG0286|consen 178 QTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYD 257 (343)
T ss_pred EEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEe
Confidence 34445688888888774 899999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
++..+.+..+.......+|++++|+-.|++|++|..|..+.+||.-.++.+..+
T Consensus 258 lRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L 311 (343)
T KOG0286|consen 258 LRADQELAVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVL 311 (343)
T ss_pred ecCCcEEeeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEe
Confidence 999998888866655566999999999999999999999999999988877654
No 14
>PTZ00420 coronin; Provisional
Probab=99.92 E-value=1.3e-22 Score=139.76 Aligned_cols=125 Identities=16% Similarity=0.172 Sum_probs=105.3
Q ss_pred EeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCc--------eeeEEEecCCCeEEEEECCCCCE-EEEecCCC
Q psy11518 9 VTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRK--------QSGALMQHEGTITCLKFTPEGSH-LISCSDDG 76 (139)
Q Consensus 9 ~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~ 76 (139)
...+|...|.++.| ++.+|++|+.|+.|++||+.++. ++..+.+|...|.+++|+|++.. +++++.|+
T Consensus 69 ~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~Dg 148 (568)
T PTZ00420 69 KLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDS 148 (568)
T ss_pred EEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCC
Confidence 34578888998887 36899999999999999987542 34567889999999999998875 57899999
Q ss_pred cEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 77 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.|++||+++++....+. +.. .|.+++|+|+|.+|++++.|+.|+|||+++++.+..+
T Consensus 149 tIrIWDl~tg~~~~~i~--~~~-~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl 205 (568)
T PTZ00420 149 FVNIWDIENEKRAFQIN--MPK-KLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSF 205 (568)
T ss_pred eEEEEECCCCcEEEEEe--cCC-cEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 99999999988766652 333 4999999999999999999999999999999877654
No 15
>KOG0271|consensus
Probab=99.92 E-value=5.6e-24 Score=136.49 Aligned_cols=126 Identities=27% Similarity=0.353 Sum_probs=108.9
Q ss_pred EEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCcee-eEEEecCCCeEEEEECC-----CCCEEEEecCCCc
Q psy11518 6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS-GALMQHEGTITCLKFTP-----EGSHLISCSDDGS 77 (139)
Q Consensus 6 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~-~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~ 77 (139)
..+...+|...|.|++| ||+.|++|+.||+|++||+++++++ ..+.+|...|++++|.| ..++||+++.||.
T Consensus 149 p~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~ 228 (480)
T KOG0271|consen 149 PLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGS 228 (480)
T ss_pred cceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCC
Confidence 34566788888888876 9999999999999999999998776 56899999999999976 5779999999999
Q ss_pred EEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
+++||+..+..+..+ ..|... |+|+.|..+ .++++++.|++|++|+...|+...
T Consensus 229 vrIWd~~~~~~~~~l-sgHT~~-VTCvrwGG~-gliySgS~DrtIkvw~a~dG~~~r 282 (480)
T KOG0271|consen 229 VRIWDTKLGTCVRTL-SGHTAS-VTCVRWGGE-GLIYSGSQDRTIKVWRALDGKLCR 282 (480)
T ss_pred EEEEEccCceEEEEe-ccCccc-eEEEEEcCC-ceEEecCCCceEEEEEccchhHHH
Confidence 999999998888887 566655 999999743 489999999999999998876544
No 16
>KOG0285|consensus
Probab=99.92 E-value=7.5e-24 Score=135.02 Aligned_cols=132 Identities=21% Similarity=0.368 Sum_probs=118.3
Q ss_pred eeeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEE
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIA 79 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 79 (139)
|++.+.+. +|.+.|.|+.+ .++++++|+.|++++|||+.+++...++.+|...|..+++++...|+++++.|++|+
T Consensus 141 wKl~rVi~--gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VK 218 (460)
T KOG0285|consen 141 WKLYRVIS--GHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVK 218 (460)
T ss_pred ceehhhhh--hccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeE
Confidence 44445444 67777777775 788999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 80 IFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 80 ~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.||+...+.++.+ ..|-.+ |.+++.+|.-..|++|+.|..+++||+++...+..+.
T Consensus 219 CwDLe~nkvIR~Y-hGHlS~-V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~ 274 (460)
T KOG0285|consen 219 CWDLEYNKVIRHY-HGHLSG-VYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLS 274 (460)
T ss_pred EEechhhhhHHHh-ccccce-eEEEeccccceeEEecCCcceEEEeeecccceEEEec
Confidence 9999999999988 677776 9999999999999999999999999999988877653
No 17
>KOG0273|consensus
Probab=99.91 E-value=3.1e-23 Score=135.74 Aligned_cols=128 Identities=23% Similarity=0.354 Sum_probs=114.7
Q ss_pred EEEEEeecceeeEEEEecC--CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCC---------CEEEEec
Q psy11518 5 TQTFVTHSHTASVRSVAAT--SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEG---------SHLISCS 73 (139)
Q Consensus 5 ~~~~~~~~~~~~v~~~~~~--~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------~~l~~~~ 73 (139)
+.++. +|.+.|.++.|+ +.+|++++.|++++||..........++.|...|..+.|+|.+ ..+++++
T Consensus 352 ~~t~~--GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas 429 (524)
T KOG0273|consen 352 VKTFI--GHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASAS 429 (524)
T ss_pred ceeee--cccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEee
Confidence 34444 689999999984 9999999999999999998888999999999999999999854 3689999
Q ss_pred CCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 74 ~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.|+.|++||+..+.++..+ ..|..+ |++++|+|+|+++++|+.||.|++|+.++++..+..
T Consensus 430 ~dstV~lwdv~~gv~i~~f-~kH~~p-VysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~ 490 (524)
T KOG0273|consen 430 FDSTVKLWDVESGVPIHTL-MKHQEP-VYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSY 490 (524)
T ss_pred cCCeEEEEEccCCceeEee-ccCCCc-eEEEEecCCCcEEEecCCCCeeEeccccchheeEee
Confidence 9999999999999999998 566655 999999999999999999999999999999988764
No 18
>KOG0315|consensus
Probab=99.90 E-value=5.9e-22 Score=121.16 Aligned_cols=84 Identities=24% Similarity=0.461 Sum_probs=71.3
Q ss_pred EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc-eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 51 MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW-QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 51 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
+.|..-+..+.+||++++||+++.|.++++|+..+. +....+ ..|... +.+.+|+.|+++|++|+.|+.+++||++.
T Consensus 212 ~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~~l-~gh~rW-vWdc~FS~dg~YlvTassd~~~rlW~~~~ 289 (311)
T KOG0315|consen 212 QAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLELVL-TGHQRW-VWDCAFSADGEYLVTASSDHTARLWDLSA 289 (311)
T ss_pred ecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEEEe-ecCCce-EEeeeeccCccEEEecCCCCceeeccccc
Confidence 457778889999999999999999999999999887 233333 455555 99999999999999999999999999999
Q ss_pred CceeEEE
Q psy11518 130 GRSAYIT 136 (139)
Q Consensus 130 ~~~~~~~ 136 (139)
++.+.+.
T Consensus 290 ~k~v~qy 296 (311)
T KOG0315|consen 290 GKEVRQY 296 (311)
T ss_pred Cceeeec
Confidence 9977654
No 19
>KOG0291|consensus
Probab=99.90 E-value=1.2e-22 Score=139.46 Aligned_cols=121 Identities=26% Similarity=0.425 Sum_probs=104.8
Q ss_pred EEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
++.++|...+.++.+ ||+++++|+.||.|++||...+-+..+|..|.+.|+.+.|+..++.+++.+-||+|+.||+..
T Consensus 344 lKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkR 423 (893)
T KOG0291|consen 344 LKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKR 423 (893)
T ss_pred eeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecc
Confidence 456778888888876 999999999999999999999999999999999999999999999999999999999999843
Q ss_pred --------------------------------------------ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCe
Q psy11518 86 --------------------------------------------WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT 121 (139)
Q Consensus 86 --------------------------------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 121 (139)
|+.+..+ .+|. +||.+++|+|++..|++++.|.+
T Consensus 424 YrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiL-sGHE-gPVs~l~f~~~~~~LaS~SWDkT 501 (893)
T KOG0291|consen 424 YRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDIL-SGHE-GPVSGLSFSPDGSLLASGSWDKT 501 (893)
T ss_pred cceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehh-cCCC-CcceeeEEccccCeEEeccccce
Confidence 2222222 3344 45999999999999999999999
Q ss_pred EEEEEcCCC
Q psy11518 122 LRTWNLVKG 130 (139)
Q Consensus 122 i~i~d~~~~ 130 (139)
|++||+-..
T Consensus 502 VRiW~if~s 510 (893)
T KOG0291|consen 502 VRIWDIFSS 510 (893)
T ss_pred EEEEEeecc
Confidence 999998654
No 20
>KOG0276|consensus
Probab=99.90 E-value=3.6e-23 Score=139.64 Aligned_cols=132 Identities=25% Similarity=0.338 Sum_probs=115.2
Q ss_pred eeeEEEEEeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCC--CCEEEEecCCC
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE--GSHLISCSDDG 76 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~ 76 (139)
|...++|. ||...|+++.+ |.+.+++++-|++|++|.+....+..++++|...|+|+.|-+. ..+|++|+.|.
T Consensus 130 wa~~qtfe--GH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~ 207 (794)
T KOG0276|consen 130 WACEQTFE--GHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDL 207 (794)
T ss_pred eeeeeEEc--CcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCc
Confidence 55677777 56667777765 8899999999999999999999999999999999999999874 46999999999
Q ss_pred cEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 77 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.+++||.++..++.++ .+|... |+.+.|+|.-.++++|++||+++||+..+-+....++
T Consensus 208 tiKvWDyQtk~CV~TL-eGHt~N-vs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn 266 (794)
T KOG0276|consen 208 TIKVWDYQTKSCVQTL-EGHTNN-VSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLN 266 (794)
T ss_pred eEEEeecchHHHHHHh-hccccc-ceEEEecCCCcEEEEecCCccEEEecCcceehhhhhh
Confidence 9999999999998888 556655 9999999999999999999999999998876655443
No 21
>KOG0316|consensus
Probab=99.90 E-value=1.9e-22 Score=122.51 Aligned_cols=123 Identities=18% Similarity=0.332 Sum_probs=112.9
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
...+.++|.++.| +|++.++++.|.+|++|++..+..++++.+|...|..++.+.+...+++|+.|..+.+||+.+++
T Consensus 13 l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGk 92 (307)
T KOG0316|consen 13 LDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGK 92 (307)
T ss_pred ecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCe
Confidence 3467888999998 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
..+.+ ..|... |..+.|+.+...+++|+.|..+++||.++....+
T Consensus 93 v~Rr~-rgH~aq-VNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~eP 137 (307)
T KOG0316|consen 93 VDRRF-RGHLAQ-VNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEP 137 (307)
T ss_pred eeeec-ccccce-eeEEEecCcceEEEeccccceeEEEEcccCCCCc
Confidence 99998 566555 9999999999999999999999999998765443
No 22
>KOG0295|consensus
Probab=99.89 E-value=7.7e-22 Score=125.77 Aligned_cols=125 Identities=29% Similarity=0.426 Sum_probs=109.7
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCC----------C-----CEEEEe
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE----------G-----SHLISC 72 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~----------~-----~~l~~~ 72 (139)
+.+|...+.-+.+ ||.++++++.|.+|++|-+.++++...+.+|+.+|.|++|.|. + .++.++
T Consensus 231 ~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~ 310 (406)
T KOG0295|consen 231 FPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSG 310 (406)
T ss_pred ccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEee
Confidence 3456666666665 9999999999999999999999999999999999999999762 2 478999
Q ss_pred cCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 73 SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 73 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+.|+.|++||+.++.++..+ ..|... |..++|+|.|++|+++.+|+++++||+++++....+
T Consensus 311 SrDktIk~wdv~tg~cL~tL-~ghdnw-Vr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~ 372 (406)
T KOG0295|consen 311 SRDKTIKIWDVSTGMCLFTL-VGHDNW-VRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTL 372 (406)
T ss_pred cccceEEEEeccCCeEEEEE-ecccce-eeeeEEcCCCeEEEEEecCCcEEEEEeccceeeecc
Confidence 99999999999999999998 666666 999999999999999999999999999998876654
No 23
>KOG0283|consensus
Probab=99.89 E-value=3e-22 Score=138.00 Aligned_cols=125 Identities=19% Similarity=0.270 Sum_probs=111.3
Q ss_pred eecceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCCce
Q psy11518 10 THSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 10 ~~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
+.||.+.|++++| ..++|++++.|.+|++|++....++..|. |...|+|++|+| |.+|+++|+-||.+++|++...+
T Consensus 365 f~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~ 443 (712)
T KOG0283|consen 365 FKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKK 443 (712)
T ss_pred hhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCe
Confidence 4589999999999 88899999999999999999999999996 999999999999 88999999999999999998877
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
...-.. -+.- |++++|.|+|+..++|+.+|.+++|++...+.+....+
T Consensus 444 Vv~W~D--l~~l-ITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I 491 (712)
T KOG0283|consen 444 VVDWND--LRDL-ITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHI 491 (712)
T ss_pred eEeehh--hhhh-heeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeE
Confidence 665542 2233 99999999999999999999999999998887766543
No 24
>KOG0282|consensus
Probab=99.89 E-value=3.1e-23 Score=135.87 Aligned_cols=125 Identities=22% Similarity=0.360 Sum_probs=112.4
Q ss_pred EEEeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccC-CceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 7 TFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVK-RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
.....+|+..|.++.| .+.+|++++.|+.|+||++-. ++++.++.+|..+|..++|+++|..+++++.|+.|++||
T Consensus 207 ~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwD 286 (503)
T KOG0282|consen 207 SHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWD 286 (503)
T ss_pred eeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeec
Confidence 3455689999998887 789999999999999999976 789999999999999999999999999999999999999
Q ss_pred eCCceEEEEEEeCCCCcceeEEEEccCC-cEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 83 VGSWQLEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
+.+|+.+..+.. +..+.++.|+|++ +.+++|+.|+.|+-||+|+++.++
T Consensus 287 tETG~~~~~f~~---~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvq 336 (503)
T KOG0282|consen 287 TETGQVLSRFHL---DKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQ 336 (503)
T ss_pred cccceEEEEEec---CCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHH
Confidence 999999999843 3338999999988 789999999999999999988654
No 25
>PTZ00421 coronin; Provisional
Probab=99.88 E-value=1e-20 Score=129.41 Aligned_cols=121 Identities=23% Similarity=0.330 Sum_probs=102.6
Q ss_pred eecceeeEEEEec--C-CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 10 THSHTASVRSVAA--T-SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~-~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
..+|...|.++.| + +++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||++++
T Consensus 121 L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg 200 (493)
T PTZ00421 121 LQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDG 200 (493)
T ss_pred ecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCC
Confidence 3467778888877 3 468999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEc----CCCeEEEEEcCCCc
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVG----KDKTLRTWNLVKGR 131 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~ 131 (139)
+....+ ..|.+.....+.|.+++..+++++ .|+.|++||+++..
T Consensus 201 ~~v~tl-~~H~~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~ 248 (493)
T PTZ00421 201 TIVSSV-EAHASAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMA 248 (493)
T ss_pred cEEEEE-ecCCCCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCC
Confidence 887776 455544356788999888777654 47999999998754
No 26
>KOG0319|consensus
Probab=99.88 E-value=1.5e-21 Score=133.55 Aligned_cols=123 Identities=24% Similarity=0.484 Sum_probs=110.6
Q ss_pred cceeeEEE--EecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRS--VAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~--~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
.|...|+| ++++.++++||+.|.+.++|+++......++.+|+..|.++.|+|..+.++|++.|++|++|.+.+..+.
T Consensus 461 aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSCl 540 (775)
T KOG0319|consen 461 AHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCL 540 (775)
T ss_pred hhcccccceEecCCCceEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceee
Confidence 34444554 5569999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..+ .+|... |....|-.++++|++++.||.+.+|++.++..+..+
T Consensus 541 kT~-eGH~~a-Vlra~F~~~~~qliS~~adGliKlWnikt~eC~~tl 585 (775)
T KOG0319|consen 541 KTF-EGHTSA-VLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTL 585 (775)
T ss_pred eee-cCccce-eEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhh
Confidence 999 556655 999999999999999999999999999998776554
No 27
>KOG0284|consensus
Probab=99.88 E-value=1.2e-22 Score=131.14 Aligned_cols=120 Identities=19% Similarity=0.328 Sum_probs=107.6
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 90 (139)
|...|.+++| +...+++++.||+|+|||....+....+.+|...|.+++|+|.-..++++++|..|++||.+++.++.
T Consensus 179 h~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~ 258 (464)
T KOG0284|consen 179 HAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLA 258 (464)
T ss_pred hhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhh
Confidence 3366777766 88899999999999999999998888899999999999999999999999999999999999999998
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
.+ ..|+.. |..+.|+|++++|++++.|..+++||+++-+.++
T Consensus 259 tl-h~HKnt-Vl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~ 300 (464)
T KOG0284|consen 259 TL-HGHKNT-VLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELF 300 (464)
T ss_pred hh-hhccce-EEEEEEcCCCCeeEEccCCceEEEEehhHhHHHH
Confidence 88 566655 9999999999999999999999999999655443
No 28
>KOG0285|consensus
Probab=99.88 E-value=5.2e-21 Score=122.22 Aligned_cols=127 Identities=21% Similarity=0.381 Sum_probs=113.5
Q ss_pred EEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
+...||...|..+.+ -..++.+++.|+.|+.||++..+.+..+.+|-+.|.|++.+|.-..+++|+.|..+++||+++
T Consensus 187 ltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRt 266 (460)
T KOG0285|consen 187 LTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRT 266 (460)
T ss_pred EeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecc
Confidence 445578777777776 677999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
...+..+ ..|... |..+.+.|-...+++|+.|++|++||++.|+.....
T Consensus 267 r~~V~~l-~GH~~~-V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tl 315 (460)
T KOG0285|consen 267 RASVHVL-SGHTNP-VASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITL 315 (460)
T ss_pred cceEEEe-cCCCCc-ceeEEeecCCCceEEecCCceEEEeeeccCceeEee
Confidence 9888888 556655 999999998999999999999999999998876543
No 29
>KOG0296|consensus
Probab=99.87 E-value=1.9e-20 Score=119.53 Aligned_cols=128 Identities=23% Similarity=0.299 Sum_probs=113.9
Q ss_pred EEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
+...+|...|+++.| +|.+||+|+.+|.|+||...++.....+...-..+.-+.|+|.+..|+.|+.||.+.+|.+.+
T Consensus 100 ~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~ 179 (399)
T KOG0296|consen 100 GELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPS 179 (399)
T ss_pred eEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCC
Confidence 455689999999998 999999999999999999999988888875667788899999999999999999999999998
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
....+.+ ..|.. ++++-.|.|+|+.++++..||.|++||+.+++++..++
T Consensus 180 ~~~~kv~-~Gh~~-~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 180 QALCKVM-SGHNS-PCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred cceeeEe-cCCCC-CcccccccCCCceEEEEecCceEEEEecCCCceeEEec
Confidence 7666666 44444 49999999999999999999999999999999998765
No 30
>KOG0318|consensus
Probab=99.87 E-value=2.6e-20 Score=123.70 Aligned_cols=128 Identities=23% Similarity=0.410 Sum_probs=112.7
Q ss_pred eecceeeEEEEec--C-CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 10 THSHTASVRSVAA--T-SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~-~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
..||...++++.+ . .-.+++|+.|+.|.+|+=..-+...++..|...|.|+.|+|||+.+++.+.||++.+||-.++
T Consensus 143 i~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktg 222 (603)
T KOG0318|consen 143 ITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTG 222 (603)
T ss_pred eeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCc
Confidence 3467788888887 3 336899999999999997777777888899999999999999999999999999999999999
Q ss_pred eEEEEEE--eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 87 QLEKLFK--KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 87 ~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+....+. .+|.+. |.+++|+||+..+++++.|.+++|||+.+.+.+..+.+
T Consensus 223 e~vg~l~~~~aHkGs-IfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~ 275 (603)
T KOG0318|consen 223 EKVGELEDSDAHKGS-IFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPM 275 (603)
T ss_pred cEEEEecCCCCcccc-EEEEEECCCCceEEEecCCceEEEEEeeccceEEEeec
Confidence 9988884 356666 99999999999999999999999999999988887754
No 31
>KOG0315|consensus
Probab=99.87 E-value=1.1e-20 Score=115.65 Aligned_cols=111 Identities=23% Similarity=0.460 Sum_probs=96.1
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.-.++.++++.|++|+ ...|++||+.++. ++.++.+|...|+.+.|..+|+++++|+.||.+++||++.....+.+
T Consensus 44 NrLeiTpdk~~LAaa~-~qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~- 121 (311)
T KOG0315|consen 44 NRLEITPDKKDLAAAG-NQHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNY- 121 (311)
T ss_pred eeEEEcCCcchhhhcc-CCeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhc-
Confidence 3445556888888776 4789999998764 68999999999999999999999999999999999999997777776
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
.+. .+|.++..+|+..-|+++..+|.|++||+.+.
T Consensus 122 -~~~-spVn~vvlhpnQteLis~dqsg~irvWDl~~~ 156 (311)
T KOG0315|consen 122 -QHN-SPVNTVVLHPNQTELISGDQSGNIRVWDLGEN 156 (311)
T ss_pred -cCC-CCcceEEecCCcceEEeecCCCcEEEEEccCC
Confidence 334 45999999999999999999999999999875
No 32
>KOG0283|consensus
Probab=99.87 E-value=2e-21 Score=134.07 Aligned_cols=120 Identities=20% Similarity=0.379 Sum_probs=103.3
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccC----------------------------------------------
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVK---------------------------------------------- 43 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~---------------------------------------------- 43 (139)
.|.+.|.++.| ||++||+|++|+.|+||.+..
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~~~ 344 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKGSQ 344 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccccC
Confidence 68889999998 999999999999999998754
Q ss_pred --------------CceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEcc-
Q psy11518 44 --------------RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP- 108 (139)
Q Consensus 44 --------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~- 108 (139)
.+++..|.+|.+.|..++|+.+ .+|++++.|.++++|++....++..+ .|... |+|++|+|
T Consensus 345 s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F--~Hndf-VTcVaFnPv 420 (712)
T KOG0283|consen 345 SPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVF--SHNDF-VTCVAFNPV 420 (712)
T ss_pred CccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEE--ecCCe-eEEEEeccc
Confidence 0123345689999999999965 58899999999999999999999888 56666 99999999
Q ss_pred CCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 109 SGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 109 ~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
|.+++++|+-|+.++||++...+.+.-
T Consensus 421 DDryFiSGSLD~KvRiWsI~d~~Vv~W 447 (712)
T KOG0283|consen 421 DDRYFISGSLDGKVRLWSISDKKVVDW 447 (712)
T ss_pred CCCcEeecccccceEEeecCcCeeEee
Confidence 888999999999999999988766543
No 33
>KOG0275|consensus
Probab=99.87 E-value=1.3e-22 Score=128.59 Aligned_cols=122 Identities=21% Similarity=0.321 Sum_probs=112.3
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE-ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
+..+|.|++| |.+++++|+.||.|++|.+.+|.++..|. .|...|+|++|+.++..+++++.|..+++-.+..|+.+
T Consensus 262 md~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~L 341 (508)
T KOG0275|consen 262 MDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCL 341 (508)
T ss_pred cccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccchhH
Confidence 4667888888 89999999999999999999999999987 79999999999999999999999999999999999999
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..+ ..|... |+...|.++|..+++++.||+|++|+..+.+.+..+
T Consensus 342 KEf-rGHsSy-vn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tf 386 (508)
T KOG0275|consen 342 KEF-RGHSSY-VNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTF 386 (508)
T ss_pred HHh-cCcccc-ccceEEcCCCCeEEEecCCccEEEecCcchhhhhhc
Confidence 988 677766 999999999999999999999999999988776554
No 34
>KOG0318|consensus
Probab=99.87 E-value=4.8e-20 Score=122.44 Aligned_cols=128 Identities=24% Similarity=0.484 Sum_probs=106.5
Q ss_pred eeeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE---ecCCCeEEEEECCCCCEEEEecCCC
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM---QHEGTITCLKFTPEGSHLISCSDDG 76 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~ 76 (139)
|++...++ .|..-|.|+.| ||.++++++.||.+.+||=.+++.+..+. +|++.|.+++|+||++.+++++.|.
T Consensus 180 FKFk~s~r--~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDk 257 (603)
T KOG0318|consen 180 FKFKSSFR--EHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADK 257 (603)
T ss_pred eeeeeccc--ccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCc
Confidence 44444444 45556666665 99999999999999999999999999988 8999999999999999999999999
Q ss_pred cEEEEEeCCceEEEEEE------------------------------------------eCCCCcceeEEEEccCCcEEE
Q psy11518 77 SIAIFRVGSWQLEKLFK------------------------------------------KAHKGTAVNHISIHPSGKLAL 114 (139)
Q Consensus 77 ~i~~~d~~~~~~~~~~~------------------------------------------~~~~~~~v~~~~~~~~~~~l~ 114 (139)
.+++||+.+.++...+. ..|... |+++..+|++++|+
T Consensus 258 t~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~-ITaLtv~~d~~~i~ 336 (603)
T KOG0318|consen 258 TIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKS-ITALTVSPDGKTIY 336 (603)
T ss_pred eEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccc-eeEEEEcCCCCEEE
Confidence 99999997655443331 223333 99999999999999
Q ss_pred EEcCCCeEEEEEcCCCce
Q psy11518 115 SVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 115 ~~~~d~~i~i~d~~~~~~ 132 (139)
+|+.||.|.-|+..++..
T Consensus 337 SgsyDG~I~~W~~~~g~~ 354 (603)
T KOG0318|consen 337 SGSYDGHINSWDSGSGTS 354 (603)
T ss_pred eeccCceEEEEecCCccc
Confidence 999999999999987754
No 35
>KOG0291|consensus
Probab=99.87 E-value=5.2e-20 Score=126.67 Aligned_cols=132 Identities=19% Similarity=0.326 Sum_probs=113.8
Q ss_pred eeeEEEEEeecceeeEEEEec--CCcEEEEeCCC-CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcE
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGAD-ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSI 78 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~-~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 78 (139)
|.+++.+.... .+|..+.+ .|..++.|+.. |.+.+|+..+..-+...++|...+++++++|||+++|+|+.||.|
T Consensus 297 f~lih~LSis~--~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKV 374 (893)
T KOG0291|consen 297 FNLIHSLSISD--QKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKV 374 (893)
T ss_pred ceEEEEeeccc--ceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcE
Confidence 45566666543 35556666 59999988864 899999999998899999999999999999999999999999999
Q ss_pred EEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
++||.+.+-+..++ ..|... |+.+.|+..++.+++.+-||+|+.||+...+...++.
T Consensus 375 KvWn~~SgfC~vTF-teHts~-Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft 431 (893)
T KOG0291|consen 375 KVWNTQSGFCFVTF-TEHTSG-VTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFT 431 (893)
T ss_pred EEEeccCceEEEEe-ccCCCc-eEEEEEEecCCEEEEeecCCeEEeeeecccceeeeec
Confidence 99999999999988 677766 9999999999999999999999999998877665543
No 36
>KOG0302|consensus
Probab=99.86 E-value=6.6e-21 Score=122.21 Aligned_cols=119 Identities=22% Similarity=0.402 Sum_probs=97.1
Q ss_pred EeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 9 VTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 9 ~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
.+.+|...|-.+.| ....|++|+.||+|+|||++.+. .....+.|.+.|+.++|+.+..+||+|+.||.+++||+
T Consensus 252 Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDL 331 (440)
T KOG0302|consen 252 PFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVISWNRREPLLASGGDDGTLSIWDL 331 (440)
T ss_pred cccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEeeccCCceeeEEccCCcceeeecCCCceEEEEEh
Confidence 34468888877777 78899999999999999998872 22334789999999999998889999999999999999
Q ss_pred CCce---EEEEEEeCCCCcceeEEEEccCC-cEEEEEcCCCeEEEEEcCC
Q psy11518 84 GSWQ---LEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 84 ~~~~---~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~ 129 (139)
++.+ ++..+ ..|+.. |+++.|+|.. ..+++++.|.+|.+||+.-
T Consensus 332 R~~~~~~pVA~f-k~Hk~p-ItsieW~p~e~s~iaasg~D~QitiWDlsv 379 (440)
T KOG0302|consen 332 RQFKSGQPVATF-KYHKAP-ITSIEWHPHEDSVIAASGEDNQITIWDLSV 379 (440)
T ss_pred hhccCCCcceeE-EeccCC-eeEEEeccccCceEEeccCCCcEEEEEeec
Confidence 8644 44555 445554 9999999954 5788889999999999863
No 37
>KOG0281|consensus
Probab=99.86 E-value=8.4e-22 Score=125.66 Aligned_cols=119 Identities=21% Similarity=0.414 Sum_probs=93.9
Q ss_pred eecceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEE--------------------------------------
Q psy11518 10 THSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALM-------------------------------------- 51 (139)
Q Consensus 10 ~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-------------------------------------- 51 (139)
..||.+.|.|+.++.+.+++|+.|.+|++||.++++++.++-
T Consensus 233 L~GHtGSVLCLqyd~rviisGSSDsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~ 312 (499)
T KOG0281|consen 233 LTGHTGSVLCLQYDERVIVSGSSDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITL 312 (499)
T ss_pred hhcCCCcEEeeeccceEEEecCCCceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHH
Confidence 458999999999999999999999999999999998766543
Q ss_pred -----ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 52 -----QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 52 -----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
+|.+.|+.+.| +.+++++++.|.+|++|+..+++.+..+ .+|..+ |.|+.+ .++++++|+.|.+|++||
T Consensus 313 rrVLvGHrAaVNvVdf--d~kyIVsASgDRTikvW~~st~efvRtl-~gHkRG-IAClQY--r~rlvVSGSSDntIRlwd 386 (499)
T KOG0281|consen 313 RRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTL-NGHKRG-IACLQY--RDRLVVSGSSDNTIRLWD 386 (499)
T ss_pred HHHHhhhhhheeeecc--ccceEEEecCCceEEEEeccceeeehhh-hccccc-ceehhc--cCeEEEecCCCceEEEEe
Confidence 45556666666 3347777777777777777777777777 566666 777766 588999999999999999
Q ss_pred cCCCceeE
Q psy11518 127 LVKGRSAY 134 (139)
Q Consensus 127 ~~~~~~~~ 134 (139)
+..|..+.
T Consensus 387 i~~G~cLR 394 (499)
T KOG0281|consen 387 IECGACLR 394 (499)
T ss_pred ccccHHHH
Confidence 99887654
No 38
>KOG0264|consensus
Probab=99.86 E-value=1.2e-20 Score=122.86 Aligned_cols=122 Identities=23% Similarity=0.401 Sum_probs=103.2
Q ss_pred EEEeecceeeEEEEec---CCcEEEEeCCCCeEEEEEcc--CCceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEE
Q psy11518 7 TFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMV--KRKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAI 80 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~ 80 (139)
...+.+|...|..++| +..++++++.|+.+.|||.+ +.++.....+|.+.|.|++|+| ++..||+|+.|++|.+
T Consensus 220 ~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~L 299 (422)
T KOG0264|consen 220 KTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVAL 299 (422)
T ss_pred eEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEE
Confidence 3455688889999888 78899999999999999999 5677778889999999999999 6778899999999999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccCC-cEEEEEcCCCeEEEEEcCC
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~ 129 (139)
||+++..........|... |..+.|+|+. ..|++++.|+++.+||+..
T Consensus 300 wDlRnL~~~lh~~e~H~de-v~~V~WSPh~etvLASSg~D~rl~vWDls~ 348 (422)
T KOG0264|consen 300 WDLRNLNKPLHTFEGHEDE-VFQVEWSPHNETVLASSGTDRRLNVWDLSR 348 (422)
T ss_pred eechhcccCceeccCCCcc-eEEEEeCCCCCceeEecccCCcEEEEeccc
Confidence 9999876544443455555 9999999955 4788889999999999964
No 39
>KOG0316|consensus
Probab=99.86 E-value=1.4e-20 Score=114.56 Aligned_cols=133 Identities=22% Similarity=0.307 Sum_probs=102.2
Q ss_pred eeEEEEEeecceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 3 TLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
.+++++..++++..=.+..+|+..+++++.|..+.+||+++++....+.+|.+.|+.++|+.+...+++|+.|..+++||
T Consensus 50 ~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wD 129 (307)
T KOG0316|consen 50 ALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWD 129 (307)
T ss_pred ceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEE
Confidence 46778887777665556667999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCce--EEEEEE------------------------------------eCCCCcceeEEEEccCCcEEEEEcCCCeEEE
Q psy11518 83 VGSWQ--LEKLFK------------------------------------KAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (139)
Q Consensus 83 ~~~~~--~~~~~~------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 124 (139)
++... +++.+. ....+.||++++|+++++..+.++.|+.+++
T Consensus 130 CRS~s~ePiQildea~D~V~Si~v~~heIvaGS~DGtvRtydiR~G~l~sDy~g~pit~vs~s~d~nc~La~~l~stlrL 209 (307)
T KOG0316|consen 130 CRSRSFEPIQILDEAKDGVSSIDVAEHEIVAGSVDGTVRTYDIRKGTLSSDYFGHPITSVSFSKDGNCSLASSLDSTLRL 209 (307)
T ss_pred cccCCCCccchhhhhcCceeEEEecccEEEeeccCCcEEEEEeecceeehhhcCCcceeEEecCCCCEEEEeeccceeee
Confidence 97643 222221 1112335666666666666666666666666
Q ss_pred EEcCCCceeEE
Q psy11518 125 WNLVKGRSAYI 135 (139)
Q Consensus 125 ~d~~~~~~~~~ 135 (139)
.|-.+|+.+..
T Consensus 210 lDk~tGklL~s 220 (307)
T KOG0316|consen 210 LDKETGKLLKS 220 (307)
T ss_pred cccchhHHHHH
Confidence 66666665543
No 40
>KOG0281|consensus
Probab=99.86 E-value=6e-22 Score=126.31 Aligned_cols=115 Identities=22% Similarity=0.357 Sum_probs=105.5
Q ss_pred ecceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE
Q psy11518 11 HSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 11 ~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 90 (139)
-||...|+.+.|+.+++++++.|.+|++|+..+.+.+.++.+|+..|.|+++ .++++++|+.|.+|++||+..|.++.
T Consensus 317 vGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLR 394 (499)
T KOG0281|consen 317 VGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLR 394 (499)
T ss_pred hhhhhheeeeccccceEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHH
Confidence 3788899999999999999999999999999999999999999999999988 78899999999999999999999999
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
.+ .+|..- |.++.| |.+.+++|+.||+|++||+..+.
T Consensus 395 vL-eGHEeL-vRciRF--d~krIVSGaYDGkikvWdl~aal 431 (499)
T KOG0281|consen 395 VL-EGHEEL-VRCIRF--DNKRIVSGAYDGKIKVWDLQAAL 431 (499)
T ss_pred HH-hchHHh-hhheee--cCceeeeccccceEEEEeccccc
Confidence 88 566666 999999 57889999999999999998764
No 41
>KOG0269|consensus
Probab=99.86 E-value=3.7e-21 Score=132.26 Aligned_cols=124 Identities=22% Similarity=0.378 Sum_probs=107.7
Q ss_pred eecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCC
Q psy11518 10 THSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 10 ~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~ 85 (139)
+..|.-.+.++.| ...+|++|+.||.|++||++..+...++.+....|..+.|+| .+..++++...|.+.+||++.
T Consensus 129 f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRq 208 (839)
T KOG0269|consen 129 FNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQ 208 (839)
T ss_pred hhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccC
Confidence 4567778888887 788999999999999999999999989888888999999999 578899999999999999998
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
..........|.+. |.++.|+|++.+|++||.|+.|+|||+.+.+...
T Consensus 209 p~r~~~k~~AH~Gp-V~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~ 256 (839)
T KOG0269|consen 209 PDRCEKKLTAHNGP-VLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKP 256 (839)
T ss_pred chhHHHHhhcccCc-eEEEeecCCCceeeecCCCccEEEEeccCCCccc
Confidence 76544443677776 9999999999999999999999999998665443
No 42
>KOG0289|consensus
Probab=99.86 E-value=5.1e-20 Score=119.97 Aligned_cols=125 Identities=22% Similarity=0.326 Sum_probs=106.8
Q ss_pred cceeeEEEEe--cCCcEEEEeCCCCeEEEEEccCCceeeEEEec--CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 12 SHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQH--EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 12 ~~~~~v~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
.|..+|+.+. +.|+++++++.|+.+.+.|.+++..+...... .-.+++.+|+|||..|.+|..|+.+++||+.++.
T Consensus 301 ~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~ 380 (506)
T KOG0289|consen 301 PHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQT 380 (506)
T ss_pred cccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCcc
Confidence 4666677666 49999999999999999999999887766542 2358999999999999999999999999999998
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
....| ..|.+. |..++|+.||.+++++.+|+.|++||+|..+....+.+
T Consensus 381 ~~a~F-pght~~-vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l 429 (506)
T KOG0289|consen 381 NVAKF-PGHTGP-VKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQL 429 (506)
T ss_pred ccccC-CCCCCc-eeEEEeccCceEEEEEecCCeEEEEEehhhcccceeec
Confidence 77777 455554 99999999999999999999999999998877666543
No 43
>KOG0643|consensus
Probab=99.85 E-value=9.4e-20 Score=112.56 Aligned_cols=127 Identities=16% Similarity=0.278 Sum_probs=109.8
Q ss_pred EEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
.+..++|+.+++.+.+ +|.+|.+++.|....+|-..+++.+.++.+|.+.|.|+..+.+.+.+++|+.|..+++||+.
T Consensus 3 pi~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~ 82 (327)
T KOG0643|consen 3 PILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVE 82 (327)
T ss_pred ccccccCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcC
Confidence 3556789999999998 89999999999999999999999999999999999999999999999999999999999998
Q ss_pred CceEEEEEEeC---------------------------------------------------CCCcceeEEEEccCCcEE
Q psy11518 85 SWQLEKLFKKA---------------------------------------------------HKGTAVNHISIHPSGKLA 113 (139)
Q Consensus 85 ~~~~~~~~~~~---------------------------------------------------~~~~~v~~~~~~~~~~~l 113 (139)
+|+.+..+..+ .+...++.+-|.|-+++|
T Consensus 83 tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~i 162 (327)
T KOG0643|consen 83 TGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETI 162 (327)
T ss_pred CCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEE
Confidence 87655433211 112347778899999999
Q ss_pred EEEcCCCeEEEEEcCCCcee
Q psy11518 114 LSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 114 ~~~~~d~~i~i~d~~~~~~~ 133 (139)
++|.+||.|.+||+++++..
T Consensus 163 i~Ghe~G~is~~da~~g~~~ 182 (327)
T KOG0643|consen 163 IAGHEDGSISIYDARTGKEL 182 (327)
T ss_pred EEecCCCcEEEEEcccCcee
Confidence 99999999999999998554
No 44
>KOG0303|consensus
Probab=99.85 E-value=1.8e-20 Score=120.94 Aligned_cols=123 Identities=22% Similarity=0.337 Sum_probs=109.4
Q ss_pred eecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCC-------ceeeEEEecCCCeEEEEECCC-CCEEEEecCCCcE
Q psy11518 10 THSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR-------KQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSI 78 (139)
Q Consensus 10 ~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i 78 (139)
..||.++|.++.| +...+|+|++|.+|+||.+... +++..+.+|...|..++|+|. .+.|++++.|..|
T Consensus 77 v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v 156 (472)
T KOG0303|consen 77 VCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTV 156 (472)
T ss_pred ccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCceE
Confidence 3579999999987 8899999999999999998643 567889999999999999994 5678999999999
Q ss_pred EEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
.+|++.+++..-.+. |... |.+++|+.||.++++.+.|..|+|||.++++.+..
T Consensus 157 ~iWnv~tgeali~l~--hpd~-i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e 210 (472)
T KOG0303|consen 157 SIWNVGTGEALITLD--HPDM-VYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSE 210 (472)
T ss_pred EEEeccCCceeeecC--CCCe-EEEEEeccCCceeeeecccceeEEEcCCCCcEeee
Confidence 999999999877763 6665 99999999999999999999999999999988764
No 45
>KOG0645|consensus
Probab=99.85 E-value=3.6e-19 Score=110.01 Aligned_cols=123 Identities=22% Similarity=0.430 Sum_probs=103.9
Q ss_pred eeeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCC---ceeeEEEecCCCeEEEEECCCCCEEEEecCCC
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR---KQSGALMQHEGTITCLKFTPEGSHLISCSDDG 76 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 76 (139)
|+.+.++. ||...|.|++| +|++||+++.|.+|-||.+..+ ++...++.|...|..+.|+|...+|++++.|.
T Consensus 95 fecv~~lE--GHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDn 172 (312)
T KOG0645|consen 95 FECVATLE--GHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDN 172 (312)
T ss_pred eeEEeeee--ccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCC
Confidence 45555555 67777777777 9999999999999999998744 56788999999999999999999999999999
Q ss_pred cEEEEEeC---CceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 77 SIAIFRVG---SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 77 ~i~~~d~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
+|++|+-. ..++...+ ..|+. .|.+++|++.|..++++++|+.++||.+.
T Consensus 173 TIk~~~~~~dddW~c~~tl-~g~~~-TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~ 225 (312)
T KOG0645|consen 173 TIKVYRDEDDDDWECVQTL-DGHEN-TVWSLAFDNIGSRLVSCSDDGTVSIWRLY 225 (312)
T ss_pred eEEEEeecCCCCeeEEEEe-cCccc-eEEEEEecCCCceEEEecCCcceEeeeec
Confidence 99999876 34456666 44444 49999999999999999999999999854
No 46
>KOG0284|consensus
Probab=99.85 E-value=9.9e-22 Score=126.89 Aligned_cols=124 Identities=23% Similarity=0.400 Sum_probs=105.8
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecC-CCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
..+.|..+|.++.| ++.++++|..+|.|++|++.-. .+..++.|. ..|.+++|+|+...+++++.||.|++||...
T Consensus 133 ilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmn-nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~ 211 (464)
T KOG0284|consen 133 ILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMN-NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRM 211 (464)
T ss_pred HhhhhcccceeEEEccCCCEEEEcCCCceEEecccchh-hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccC
Confidence 34578888888888 9999999999999999997544 344445554 8999999999999999999999999999988
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
......+ ..|.-. |.+++|+|....+++++.|..|.+||.+++..+.+
T Consensus 212 ~kee~vL-~GHgwd-VksvdWHP~kgLiasgskDnlVKlWDprSg~cl~t 259 (464)
T KOG0284|consen 212 PKEERVL-RGHGWD-VKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLAT 259 (464)
T ss_pred Cchhhee-ccCCCC-cceeccCCccceeEEccCCceeEeecCCCcchhhh
Confidence 8777776 444444 99999999999999999999999999999987654
No 47
>KOG0277|consensus
Probab=99.85 E-value=4.3e-20 Score=113.33 Aligned_cols=119 Identities=22% Similarity=0.277 Sum_probs=102.9
Q ss_pred ecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCCc
Q psy11518 11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 11 ~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
++|...|.++.+ ++..+++++-|++|++|+...++.+.++.+|...|...+|+| .++.+++++.|+.+++||++..
T Consensus 101 kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~ 180 (311)
T KOG0277|consen 101 KEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSP 180 (311)
T ss_pred HhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCC
Confidence 467788888888 778899999999999999999999999999999999999999 6889999999999999999876
Q ss_pred eEEEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
...-.+ ..|... +.++.|+. +...+++|+.|+.|++||+++-+
T Consensus 181 gk~~~i-~ah~~E-il~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r 224 (311)
T KOG0277|consen 181 GKFMSI-EAHNSE-ILCCDWSKYNHNVLATGGVDNLVRGWDIRNLR 224 (311)
T ss_pred CceeEE-Eeccce-eEeecccccCCcEEEecCCCceEEEEehhhcc
Confidence 444444 455534 99999997 77789999999999999998754
No 48
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.85 E-value=4.4e-19 Score=112.91 Aligned_cols=123 Identities=24% Similarity=0.435 Sum_probs=106.8
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
+|..++.++.+ +++++++++.++.+.+|++.+++....+..|...+..+.|+|+++.+++++.++.+.+||+.+++..
T Consensus 7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~ 86 (289)
T cd00200 7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECV 86 (289)
T ss_pred ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccce
Confidence 67788888887 7799999999999999999998888888899999999999999999999999999999999987766
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..+ ..+... +.++.|+++++++++++.|+.+.+||+++++....+
T Consensus 87 ~~~-~~~~~~-i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 131 (289)
T cd00200 87 RTL-TGHTSY-VSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTL 131 (289)
T ss_pred EEE-eccCCc-EEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEe
Confidence 666 344444 999999999889998888999999999977766554
No 49
>KOG0319|consensus
Probab=99.84 E-value=6.6e-20 Score=125.60 Aligned_cols=115 Identities=23% Similarity=0.364 Sum_probs=108.0
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
..||...+.|++| ..+.+++++.|.+|+||.+.+..++.+|.+|+..|..++|-.+++.|++++.||.+++|++.++.
T Consensus 501 LsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlWnikt~e 580 (775)
T KOG0319|consen 501 LSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLWNIKTNE 580 (775)
T ss_pred eeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEEeccchh
Confidence 3488888999988 77899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
+...+ ..|+.. |++++-+|....+++|+.||.|.+|.
T Consensus 581 C~~tl-D~H~Dr-vWaL~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 581 CEMTL-DAHNDR-VWALSVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred hhhhh-hhccce-eEEEeecCccceeEecCCCeEEEEee
Confidence 99998 677766 99999999999999999999999994
No 50
>KOG0265|consensus
Probab=99.84 E-value=7.4e-20 Score=114.36 Aligned_cols=126 Identities=21% Similarity=0.343 Sum_probs=108.8
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCC-EEEEecCCCcEEEEEeCC
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~ 85 (139)
...+|.+.|+.+.+ ++..+++++.|.+|+.||.++++.+..+++|..-|+.+.-+..|. ++.+++.|+++++||+++
T Consensus 85 ~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~ 164 (338)
T KOG0265|consen 85 VLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRK 164 (338)
T ss_pred eeccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecc
Confidence 34589999999998 999999999999999999999999999999999999888554444 567899999999999998
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
...+..+. ...+++++.|..++..+.+|+-|+.|.+||++.+...+..+
T Consensus 165 k~~~~t~~---~kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~ls 213 (338)
T KOG0265|consen 165 KEAIKTFE---NKYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLS 213 (338)
T ss_pred cchhhccc---cceeEEEEEecccccceeeccccCceeeeccccCcceEEee
Confidence 87777762 22339999999999999999999999999999887776643
No 51
>KOG0295|consensus
Probab=99.84 E-value=1.4e-19 Score=115.68 Aligned_cols=101 Identities=22% Similarity=0.457 Sum_probs=95.2
Q ss_pred cEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEE
Q psy11518 25 KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHI 104 (139)
Q Consensus 25 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~ 104 (139)
+++.+++.|++|++||+.++.++.++.+|...|..++|+|.|+|++++..|+.+++||+++.++...+ ..|..- ++++
T Consensus 305 ~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~-~ah~hf-vt~l 382 (406)
T KOG0295|consen 305 QVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTL-EAHEHF-VTSL 382 (406)
T ss_pred cEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeecc-CCCcce-eEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999888 466666 9999
Q ss_pred EEccCCcEEEEEcCCCeEEEEEc
Q psy11518 105 SIHPSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 105 ~~~~~~~~l~~~~~d~~i~i~d~ 127 (139)
+|+.+-.++++|+-|-.+.+|.-
T Consensus 383 Dfh~~~p~VvTGsVdqt~KvwEc 405 (406)
T KOG0295|consen 383 DFHKTAPYVVTGSVDQTVKVWEC 405 (406)
T ss_pred ecCCCCceEEeccccceeeeeec
Confidence 99999999999999999999964
No 52
>KOG0647|consensus
Probab=99.84 E-value=1.1e-19 Score=113.67 Aligned_cols=122 Identities=21% Similarity=0.306 Sum_probs=100.4
Q ss_pred eeeEEEEec---CCcEEEEeCCCCeEEEEEccCC-cee-eEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 14 TASVRSVAA---TSKLAASSGADETVVLYDMVKR-KQS-GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 14 ~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~-~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
...|.+++| ...++++++-|++|++|+++.. ... .....|.++|.+++|+.+|..+++|+.|+.+++||+.+++.
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q~ 106 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQV 106 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCCCe
Confidence 445666666 5677889999999999999763 322 34557899999999999999999999999999999999976
Q ss_pred EEEEEeCCCCcceeEEEEccCCc--EEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGK--LALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
...- .|... |..+.|-+... .|++|+.|.+|+.||+|+..++.++++
T Consensus 107 ~~v~--~Hd~p-vkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~L 155 (347)
T KOG0647|consen 107 SQVA--AHDAP-VKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQL 155 (347)
T ss_pred eeee--ecccc-eeEEEEecCCCcceeEecccccceeecccCCCCeeeeeec
Confidence 6554 45544 88898887554 899999999999999999999888765
No 53
>PTZ00420 coronin; Provisional
Probab=99.84 E-value=1.2e-18 Score=120.44 Aligned_cols=125 Identities=17% Similarity=0.262 Sum_probs=98.5
Q ss_pred eecceeeEEEEec--CCc-EEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 10 THSHTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
..+|...|.++.| ++. .+++++.|+.|++||+.+++.+..+. |...|.+++|+|+|++|++++.|+.|++||++++
T Consensus 121 L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg 199 (568)
T PTZ00420 121 LKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQ 199 (568)
T ss_pred eecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCC
Confidence 3467778888887 555 45789999999999999998777775 5678999999999999999999999999999999
Q ss_pred eEEEEEEeCCCCcc----eeEEEEccCCcEEEEEcCC----CeEEEEEcCC-CceeEEE
Q psy11518 87 QLEKLFKKAHKGTA----VNHISIHPSGKLALSVGKD----KTLRTWNLVK-GRSAYIT 136 (139)
Q Consensus 87 ~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~-~~~~~~~ 136 (139)
+.+..+ ..|.+.. +....|++++.++++++.| +.|++||+++ ++++..+
T Consensus 200 ~~i~tl-~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~ 257 (568)
T PTZ00420 200 EIASSF-HIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTM 257 (568)
T ss_pred cEEEEE-ecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEE
Confidence 888776 4555431 2233456888999988766 4799999995 5555543
No 54
>KOG0296|consensus
Probab=99.84 E-value=7.2e-19 Score=112.39 Aligned_cols=124 Identities=22% Similarity=0.431 Sum_probs=109.2
Q ss_pred eecceeeEEEEe--cCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 10 THSHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 10 ~~~~~~~v~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
+.+|...+.+++ |+.+++++|+.|..-.+|+..++..+..+.+|+..|+++.|+.+|.+||||+.+|.|.+|+..++.
T Consensus 60 F~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~ 139 (399)
T KOG0296|consen 60 FDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGG 139 (399)
T ss_pred hhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCc
Confidence 446777777776 589999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
....+. .....+.-+.|||.+.+|+.|+.||.+.+|.+.++...+.
T Consensus 140 ~~~~~~--~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv 185 (399)
T KOG0296|consen 140 EQWKLD--QEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKV 185 (399)
T ss_pred eEEEee--cccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeE
Confidence 888873 2223388899999999999999999999999988644443
No 55
>KOG0265|consensus
Probab=99.84 E-value=1.3e-19 Score=113.33 Aligned_cols=125 Identities=23% Similarity=0.357 Sum_probs=104.5
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEcc-CCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMV-KRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
..+|.+.|..+.| +|..+++|+.|..|.+|++. ..+....+++|.+.|..+.|.++++.+++++.|..++.||.+++
T Consensus 43 l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG 122 (338)
T KOG0265|consen 43 LPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETG 122 (338)
T ss_pred cCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccc
Confidence 4578888888887 99999999999999999954 44667888899999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+....+ ..|... +..++-+.-|. ++.+++.|+++++||+|+...+..+
T Consensus 123 ~~~rk~-k~h~~~-vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~ 171 (338)
T KOG0265|consen 123 KRIRKH-KGHTSF-VNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTF 171 (338)
T ss_pred eeeehh-ccccce-eeecCccccCCeEEEecCCCceEEEEeecccchhhcc
Confidence 999888 566655 77777444444 6667889999999999966555443
No 56
>KOG0292|consensus
Probab=99.84 E-value=5.6e-20 Score=128.62 Aligned_cols=118 Identities=26% Similarity=0.382 Sum_probs=111.0
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
+.+|.++|..+.| .+.++++|+.|-.|++|+.++.+++.++.+|-..|..+.|++...++++++.|.+|++|+.+++.
T Consensus 47 FdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~ 126 (1202)
T KOG0292|consen 47 FDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRK 126 (1202)
T ss_pred hhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCc
Confidence 4578889988887 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
++..+ .+|... |.|..|+|....+++++-|.+|++||+.-
T Consensus 127 ~iavl-tGHnHY-VMcAqFhptEDlIVSaSLDQTVRVWDisG 166 (1202)
T KOG0292|consen 127 CIAVL-TGHNHY-VMCAQFHPTEDLIVSASLDQTVRVWDISG 166 (1202)
T ss_pred eEEEE-ecCceE-EEeeccCCccceEEEecccceEEEEeecc
Confidence 99998 777777 99999999999999999999999999864
No 57
>KOG0772|consensus
Probab=99.84 E-value=3.4e-20 Score=123.11 Aligned_cols=124 Identities=24% Similarity=0.314 Sum_probs=99.7
Q ss_pred EeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCce-eeEEE-----ecCCCeEEEEECCCCCEEEEecCCCcEE
Q psy11518 9 VTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQ-SGALM-----QHEGTITCLKFTPEGSHLISCSDDGSIA 79 (139)
Q Consensus 9 ~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~-~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 79 (139)
.+.||...++|-+| +.+.+++++.||++++||+...+. +..++ +..-.++.++|+|+++.+|+|+.||.|.
T Consensus 263 nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ 342 (641)
T KOG0772|consen 263 NTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQ 342 (641)
T ss_pred ccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCcee
Confidence 35688888888887 677899999999999999976543 33333 2345688999999999999999999999
Q ss_pred EEEeCCceE--EEEEEeCCCC-cceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 80 IFRVGSWQL--EKLFKKAHKG-TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 80 ~~d~~~~~~--~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
+|+...... ...+...|.. ..|+++.|+++|++|++-+.|+.+++||+++.+.
T Consensus 343 ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kk 398 (641)
T KOG0772|consen 343 IWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKK 398 (641)
T ss_pred eeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeecccccc
Confidence 999865443 2333445554 2499999999999999999999999999998654
No 58
>KOG0645|consensus
Probab=99.84 E-value=2e-18 Score=106.74 Aligned_cols=115 Identities=29% Similarity=0.460 Sum_probs=101.5
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCC--ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKR--KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
+|...|..++| .|++|++|+-|.++.||.-..+ +++.++.+|+..|.|++|+++|++||++++|..+-+|.+....
T Consensus 59 ~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~dedd 138 (312)
T KOG0645|consen 59 GHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDD 138 (312)
T ss_pred cchheeeeeeecCCCcEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCC
Confidence 67788888887 9999999999999999987654 6788899999999999999999999999999999999997543
Q ss_pred ---EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 88 ---LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 88 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
....+ .+|... |-.+.|||...+|++++.|.+|++|+-.
T Consensus 139 Efec~aVL-~~HtqD-VK~V~WHPt~dlL~S~SYDnTIk~~~~~ 180 (312)
T KOG0645|consen 139 EFECIAVL-QEHTQD-VKHVIWHPTEDLLFSCSYDNTIKVYRDE 180 (312)
T ss_pred cEEEEeee-cccccc-ccEEEEcCCcceeEEeccCCeEEEEeec
Confidence 45555 566666 9999999999999999999999999876
No 59
>KOG0275|consensus
Probab=99.83 E-value=1.6e-21 Score=123.59 Aligned_cols=119 Identities=22% Similarity=0.353 Sum_probs=106.5
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEEccCCceeeE--------EEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYDMVKRKQSGA--------LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
.+..++|||+++++|+.||.|.+|+..+|+.... |.-+...|.|+.|+.+..++|+|+.||.|++|.+.+|+
T Consensus 217 EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ 296 (508)
T KOG0275|consen 217 ECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQ 296 (508)
T ss_pred hheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEecch
Confidence 3445566999999999999999999998876543 33478899999999999999999999999999999999
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
++..+...|..+ |+++.|+.|+..+++++.|..+++--+.+|+.+..
T Consensus 297 ClRrFdrAHtkG-vt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKE 343 (508)
T KOG0275|consen 297 CLRRFDRAHTKG-VTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKE 343 (508)
T ss_pred HHHHhhhhhccC-eeEEEEccCcchhhcccccceEEEeccccchhHHH
Confidence 999998788888 99999999999999999999999999999987643
No 60
>KOG0313|consensus
Probab=99.83 E-value=2.3e-19 Score=115.19 Aligned_cols=127 Identities=20% Similarity=0.302 Sum_probs=107.2
Q ss_pred EEeecceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 8 FVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
....||..+|.++.| +...+++++.|++|+.||+.++....++... ..++++.++|..+++++|+.|..+++||.+++
T Consensus 254 vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~~-ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~ 332 (423)
T KOG0313|consen 254 VTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTTN-KSLNCISYSPLSKLLASGSSDRHIRLWDPRTG 332 (423)
T ss_pred EEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeeecC-cceeEeecccccceeeecCCCCceeecCCCCC
Confidence 345689999999999 8888999999999999999999988888754 56799999999999999999999999999876
Q ss_pred e--EEEEEEeCCCCcceeEEEEccCC-cEEEEEcCCCeEEEEEcCCCc-eeEEE
Q psy11518 87 Q--LEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGR-SAYIT 136 (139)
Q Consensus 87 ~--~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~-~~~~~ 136 (139)
. ........|..- |.++.|+|.. .++++++.|+++++||+|+.+ +++.+
T Consensus 333 ~gs~v~~s~~gH~nw-Vssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI 385 (423)
T KOG0313|consen 333 DGSVVSQSLIGHKNW-VSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDI 385 (423)
T ss_pred CCceeEEeeecchhh-hhheecCCCCceEEEEEecCCeEEEEEeccCCCcceee
Confidence 4 233222566665 9999999954 578899999999999999987 66554
No 61
>KOG0310|consensus
Probab=99.83 E-value=7.5e-19 Score=115.62 Aligned_cols=128 Identities=17% Similarity=0.205 Sum_probs=107.3
Q ss_pred EEEeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCC-ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 7 TFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR-KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
.....+|+.+|.|.++ ++.++++|+.||.|++||.... ..+.++ .|..+|..+.+-|.|..+++++.. .+++||
T Consensus 146 ~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAgGn-~vkVWD 223 (487)
T KOG0310|consen 146 QAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAGGN-SVKVWD 223 (487)
T ss_pred EEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcCCC-eEEEEE
Confidence 4456689999988887 6779999999999999999887 555555 488999999999999999998865 699999
Q ss_pred eCCce-EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 83 VGSWQ-LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 83 ~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+-+|. .+..+ ..|... |+|+++..++..|++++-|+.+++||+.+.+.++.+.+
T Consensus 224 l~~G~qll~~~-~~H~Kt-VTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~ 278 (487)
T KOG0310|consen 224 LTTGGQLLTSM-FNHNKT-VTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKY 278 (487)
T ss_pred ecCCceehhhh-hcccce-EEEEEeecCCceEeecccccceEEEEccceEEEEeeec
Confidence 98554 44444 346655 99999999999999999999999999999888887764
No 62
>KOG0293|consensus
Probab=99.83 E-value=6e-20 Score=119.21 Aligned_cols=117 Identities=23% Similarity=0.409 Sum_probs=101.7
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCC---ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKR---KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
.|...|.-+.| +|++||+++.|.+..+|++... +..+++.+|..+|..+.|+||.+++++|+.+..+.+||..++
T Consensus 222 ~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tg 301 (519)
T KOG0293|consen 222 DHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTG 301 (519)
T ss_pred hCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcc
Confidence 45555555555 9999999999999999998654 346788899999999999999999999999999999999999
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
.....++.. .+..+.+.+|.|||..+++|+.|+.+..||+..
T Consensus 302 d~~~~y~~~-~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDg 343 (519)
T KOG0293|consen 302 DLRHLYPSG-LGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDG 343 (519)
T ss_pred hhhhhcccC-cCCCcceeEEccCCceeEecCCCCcEEEecCCc
Confidence 999888555 344599999999999999999999999999863
No 63
>KOG0640|consensus
Probab=99.83 E-value=6.5e-20 Score=115.59 Aligned_cols=124 Identities=28% Similarity=0.411 Sum_probs=111.8
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEE---EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGAL---MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
...++.+++| .|+++++|..-..+++||+++.++.... ..|.+.|+++.+++.+++.++++.||.|++||--.++
T Consensus 215 d~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~r 294 (430)
T KOG0640|consen 215 DTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNR 294 (430)
T ss_pred ccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHH
Confidence 3456667766 9999999999999999999998765432 4689999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
++..+...|.+..|.+..|..+++++++.+.|..+.+|.+.+++++..+
T Consensus 295 Cv~t~~~AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~Y 343 (430)
T KOG0640|consen 295 CVRTIGNAHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEY 343 (430)
T ss_pred HHHHHHhhcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEE
Confidence 9999988999988999999999999999999999999999999998765
No 64
>KOG0276|consensus
Probab=99.83 E-value=1.7e-19 Score=122.21 Aligned_cols=131 Identities=22% Similarity=0.326 Sum_probs=112.0
Q ss_pred eeeEEEEEeecceeeEEEEe--cCCcEEEEeCCCCeEEEEEccCC-ceeeEEEecCCCeEEEEECC-CCCEEEEecCCCc
Q psy11518 2 YTLTQTFVTHSHTASVRSVA--ATSKLAASSGADETVVLYDMVKR-KQSGALMQHEGTITCLKFTP-EGSHLISCSDDGS 77 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~--~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~ 77 (139)
++.++.|. .|...+.|+. |..+++++++.|-.|++||.+.. .+.++|.+|...|.+++|+| |.+.+|+++-|++
T Consensus 87 ~ekV~~Fe--AH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrT 164 (794)
T KOG0276|consen 87 GEKVKTFE--AHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRT 164 (794)
T ss_pred ceeeEEee--ccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeecccc
Confidence 34455555 5666666665 58999999999999999999775 77889999999999999999 7889999999999
Q ss_pred EEEEEeCCceEEEEEEeCCCCcceeEEEEccCC--cEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG--KLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
|++|.+.+..+..++ ..|..+ |.++++-+.| +++++|++|..+.|||..+.+.++++
T Consensus 165 VKVWslgs~~~nfTl-~gHekG-VN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TL 223 (794)
T KOG0276|consen 165 VKVWSLGSPHPNFTL-EGHEKG-VNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTL 223 (794)
T ss_pred EEEEEcCCCCCceee-eccccC-cceEEeccCCCcceEEecCCCceEEEeecchHHHHHHh
Confidence 999999999888888 477777 9999998744 69999999999999999988766543
No 65
>KOG0310|consensus
Probab=99.83 E-value=1.8e-19 Score=118.50 Aligned_cols=119 Identities=22% Similarity=0.324 Sum_probs=99.4
Q ss_pred eeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCC-CCEEEEecCCCcEEEEEeCCceEEEE
Q psy11518 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQLEKL 91 (139)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~ 91 (139)
..+.++.| ||+++++|...|.|++||.++...+..+.+|+.++..+.|+|. +..+++|+.|+.+++||+.+......
T Consensus 69 ~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~ 148 (487)
T KOG0310|consen 69 DVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAE 148 (487)
T ss_pred cceeEEEeecCCeEEEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEE
Confidence 34555666 8999999999999999997776678889999999999999995 56678889899999999998886434
Q ss_pred EEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCC-ceeEE
Q psy11518 92 FKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKG-RSAYI 135 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~-~~~~~ 135 (139)
+ ..|... |.+.+|+| ++..+++|+.||.|++||++.. ..+..
T Consensus 149 l-~~htDY-VR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~e 192 (487)
T KOG0310|consen 149 L-SGHTDY-VRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVE 192 (487)
T ss_pred e-cCCcce-eEeeccccCCCeEEEecCCCceEEEEEeccCCceeEE
Confidence 4 677777 99999999 4558999999999999999987 44443
No 66
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.83 E-value=6.1e-18 Score=107.64 Aligned_cols=123 Identities=28% Similarity=0.485 Sum_probs=104.9
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
.|...+..+.+ +++.+++++.++.|.+|++.+++.+..+..|...+.++.|+++++++++++.++.+.+||+.+++..
T Consensus 49 ~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 128 (289)
T cd00200 49 GHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCL 128 (289)
T ss_pred cCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEE
Confidence 45556656665 6779999999999999999988888888899889999999999889999988999999999988877
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..+. .+... +.+++|+|++.++++++.|+.+++||+++++.+..+
T Consensus 129 ~~~~-~~~~~-i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~ 173 (289)
T cd00200 129 TTLR-GHTDW-VNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATL 173 (289)
T ss_pred EEec-cCCCc-EEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeE
Confidence 7773 44444 999999999999999888999999999987766554
No 67
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.82 E-value=2e-18 Score=124.78 Aligned_cols=114 Identities=18% Similarity=0.274 Sum_probs=98.8
Q ss_pred eeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCCceEEE
Q psy11518 15 ASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 15 ~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~ 90 (139)
..+.++.| ++.++++++.|+.|++||+.+++.+..+.+|...|.+++|+| ++.+|++|+.|+.|++||++++....
T Consensus 533 ~~v~~l~~~~~~~~~las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~ 612 (793)
T PLN00181 533 SKLSGICWNSYIKSQVASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIG 612 (793)
T ss_pred CceeeEEeccCCCCEEEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEE
Confidence 34555665 578999999999999999999999999999999999999997 78999999999999999999888877
Q ss_pred EEEeCCCCcceeEEEEc-cCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 91 LFKKAHKGTAVNHISIH-PSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
.+. ... .+.++.|+ +++.++++|+.|+.|++||+++.+
T Consensus 613 ~~~--~~~-~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~ 651 (793)
T PLN00181 613 TIK--TKA-NICCVQFPSESGRSLAFGSADHKVYYYDLRNPK 651 (793)
T ss_pred EEe--cCC-CeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 763 233 38899995 578999999999999999998765
No 68
>KOG0273|consensus
Probab=99.82 E-value=6.8e-19 Score=115.66 Aligned_cols=103 Identities=24% Similarity=0.347 Sum_probs=95.7
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCccee
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 102 (139)
.+..+++++.|++|++||+..+.+++.|..|+.+|.+++|+|+++++|+|+.||.|.+|+++.++....+ ...+. |.
T Consensus 421 ~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~--~~~~~-If 497 (524)
T KOG0273|consen 421 MNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSY--QGTGG-IF 497 (524)
T ss_pred CCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeEee--cCCCe-EE
Confidence 5668999999999999999999999999999999999999999999999999999999999999998887 33444 99
Q ss_pred EEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 103 HISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 103 ~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
.++|+.+|.++..+-.|+.+.+.|++
T Consensus 498 el~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 498 ELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred EEEEcCCCCEEEEEecCCCceEEEec
Confidence 99999999999999999999999986
No 69
>KOG0267|consensus
Probab=99.82 E-value=1.6e-20 Score=128.55 Aligned_cols=126 Identities=25% Similarity=0.433 Sum_probs=113.2
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
+.+|..+|-++.| +..+|++|..+|+|++||++..+.+.++.+|...+..+.|+|-+.+.+.|+.|+.+++||++...
T Consensus 66 ~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~G 145 (825)
T KOG0267|consen 66 LTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKG 145 (825)
T ss_pred eeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccC
Confidence 4578888888888 67789999999999999999999999999999999999999999999999999999999999877
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+...+ ..|... +..+.|+|+|++++.+++|..++|||+..|+....++
T Consensus 146 c~~~~-~s~~~v-v~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~ 193 (825)
T KOG0267|consen 146 CSHTY-KSHTRV-VDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFK 193 (825)
T ss_pred ceeee-cCCcce-eEEEeecCCCceeeccCCcceeeeecccccccccccc
Confidence 88887 446655 8999999999999999999999999999888775543
No 70
>KOG0282|consensus
Probab=99.82 E-value=2.4e-20 Score=122.49 Aligned_cols=126 Identities=21% Similarity=0.315 Sum_probs=109.0
Q ss_pred eEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCC-CEEEEecCCCcEEE
Q psy11518 4 LTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAI 80 (139)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~ 80 (139)
.+++|. +|..+|.+++| +|..+++++.|+.|++||+++|+++..+.. ...++|+.|+|++ +.+++|+.|+.|+.
T Consensus 250 ~lrtf~--gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~-~~~~~cvkf~pd~~n~fl~G~sd~ki~~ 326 (503)
T KOG0282|consen 250 CLRTFK--GHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHL-DKVPTCVKFHPDNQNIFLVGGSDKKIRQ 326 (503)
T ss_pred eehhhh--cchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEec-CCCceeeecCCCCCcEEEEecCCCcEEE
Confidence 344444 78888998888 899999999999999999999999998874 3467899999987 78899999999999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
||+++++....+ ..|-+. |..+.|-++++.+++.++|+.++||+.+.+-++.
T Consensus 327 wDiRs~kvvqeY-d~hLg~-i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik 378 (503)
T KOG0282|consen 327 WDIRSGKVVQEY-DRHLGA-ILDITFVDEGRRFISSSDDKSVRIWENRIPVPIK 378 (503)
T ss_pred EeccchHHHHHH-Hhhhhh-eeeeEEccCCceEeeeccCccEEEEEcCCCccch
Confidence 999999988777 444454 9999999999999999999999999998765543
No 71
>KOG0308|consensus
Probab=99.82 E-value=4e-19 Score=120.60 Aligned_cols=124 Identities=21% Similarity=0.344 Sum_probs=109.1
Q ss_pred cceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCc--eeeE--------EE-ecCCCeEEEEECCCCCEEEEecCCCc
Q psy11518 12 SHTASVRSVAA---TSKLAASSGADETVVLYDMVKRK--QSGA--------LM-QHEGTITCLKFTPEGSHLISCSDDGS 77 (139)
Q Consensus 12 ~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~--~~~~--------~~-~~~~~v~~~~~~~~~~~l~~~~~d~~ 77 (139)
.|..+|.|+++ +...+|+|+-|+.|.+||++++. .+.. +. ++...|.+++.++.+..+++|+..+.
T Consensus 115 ~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~ 194 (735)
T KOG0308|consen 115 THKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKD 194 (735)
T ss_pred cccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccc
Confidence 47888999887 88899999999999999999772 2222 22 78889999999999999999999999
Q ss_pred EEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
|++||.++.+.+-.+ .+|... |..+-.++||..+++++.||.|++||+...+.+..+.
T Consensus 195 lr~wDprt~~kimkL-rGHTdN-Vr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~ 252 (735)
T KOG0308|consen 195 LRLWDPRTCKKIMKL-RGHTDN-VRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYI 252 (735)
T ss_pred eEEeccccccceeee-eccccc-eEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEE
Confidence 999999999888888 588877 9999999999999999999999999999998887754
No 72
>KOG0277|consensus
Probab=99.82 E-value=1.2e-18 Score=107.02 Aligned_cols=116 Identities=18% Similarity=0.304 Sum_probs=97.8
Q ss_pred eeEEEEec---CCcEEEEeCCCCeEEEEEccC-CceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 15 ASVRSVAA---TSKLAASSGADETVVLYDMVK-RKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 15 ~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
..+..++| ..+.+++++.||++++||... ..++..++.|..+|.++.|++ +++.+++++.|++|++|+...+..+
T Consensus 61 D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv 140 (311)
T KOG0277|consen 61 DGLFDVAWSENHENQVIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSV 140 (311)
T ss_pred cceeEeeecCCCcceEEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcce
Confidence 44556666 567899999999999999643 467889999999999999998 5667788899999999999888888
Q ss_pred EEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 90 KLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
.++ ..|... |....|+| ....+++++.|+.+++||++....
T Consensus 141 ~Tf-~gh~~~-Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk 182 (311)
T KOG0277|consen 141 QTF-NGHNSC-IYQAAFSPHIPNLFASASGDGTLRLWDVRSPGK 182 (311)
T ss_pred Eee-cCCccE-EEEEecCCCCCCeEEEccCCceEEEEEecCCCc
Confidence 887 666666 99999999 567899999999999999986543
No 73
>KOG0973|consensus
Probab=99.82 E-value=1.1e-18 Score=123.42 Aligned_cols=125 Identities=26% Similarity=0.399 Sum_probs=109.0
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccC------------------CceeeEEEecCCCeEEEEECCCCCEE
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVK------------------RKQSGALMQHEGTITCLKFTPEGSHL 69 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~l 69 (139)
...|.+.+.|+.| ||++||+|+.|+.|.+|+... .+....+.+|...|..+.|+|++.++
T Consensus 65 m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~l 144 (942)
T KOG0973|consen 65 MDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLL 144 (942)
T ss_pred eccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEE
Confidence 3468889999987 999999999999999999762 13566788999999999999999999
Q ss_pred EEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 70 ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 70 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
++++-|+.|.+|+..+.+.+..+ ..|.+. |-.+.|.|-|+++++-++|+.|.||++.+-.....+
T Consensus 145 vS~s~DnsViiwn~~tF~~~~vl-~~H~s~-VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~I 209 (942)
T KOG0973|consen 145 VSVSLDNSVIIWNAKTFELLKVL-RGHQSL-VKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSI 209 (942)
T ss_pred EEecccceEEEEccccceeeeee-eccccc-ccceEECCccCeeeeecCCceEEEEEcccceeeEee
Confidence 99999999999999999888887 666666 999999999999999999999999998775554443
No 74
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.81 E-value=5.6e-18 Score=122.43 Aligned_cols=122 Identities=16% Similarity=0.264 Sum_probs=99.6
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCC----c----eeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKR----K----QSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAI 80 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~----~----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~ 80 (139)
.|...|.++.| +++++++|+.|+.|++|+.... . +...+. +...+.+++|++ .+.++++++.||.|++
T Consensus 481 ~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~l 559 (793)
T PLN00181 481 NSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQV 559 (793)
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEEE
Confidence 36777888887 8999999999999999997532 1 222333 346789999987 5789999999999999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
||+.+++....+ ..|... |.+++|+| ++.+|++|+.|+.|++||+++++.+..+
T Consensus 560 Wd~~~~~~~~~~-~~H~~~-V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~ 614 (793)
T PLN00181 560 WDVARSQLVTEM-KEHEKR-VWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI 614 (793)
T ss_pred EECCCCeEEEEe-cCCCCC-EEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEE
Confidence 999988887777 456555 99999997 7889999999999999999988776554
No 75
>KOG0292|consensus
Probab=99.81 E-value=3.2e-19 Score=124.92 Aligned_cols=122 Identities=18% Similarity=0.273 Sum_probs=111.8
Q ss_pred eeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEE
Q psy11518 14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 91 (139)
...+..++| ..+.++++-..|.|.+||.+.+..+..|.+|+++|..+.|+|+..++++|+.|..|++|+..+.+++..
T Consensus 9 SsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclft 88 (1202)
T KOG0292|consen 9 SSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFT 88 (1202)
T ss_pred cccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehhh
Confidence 344555554 889999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+ .+|-.. |..+.||+.-.+++++++|.+|+|||..+++.+..+.
T Consensus 89 L-~GHlDY-VRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavlt 132 (1202)
T KOG0292|consen 89 L-LGHLDY-VRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLT 132 (1202)
T ss_pred h-ccccce-eEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEe
Confidence 8 788877 9999999999999999999999999999999887653
No 76
>KOG0302|consensus
Probab=99.81 E-value=3.9e-19 Score=114.20 Aligned_cols=129 Identities=26% Similarity=0.314 Sum_probs=102.3
Q ss_pred eeeEEEEEeecceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCce---eeEEEecCCCeEEEEECC-CCCEEEEecCCC
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQ---SGALMQHEGTITCLKFTP-EGSHLISCSDDG 76 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~---~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~ 76 (139)
+..+.++..++..++..++++ ....+++|..-+.|++|.+.++.= ...+.+|...|-.++||| ....|++|+.||
T Consensus 201 ~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~Dg 280 (440)
T KOG0302|consen 201 FRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDG 280 (440)
T ss_pred cCceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccCceEEeeecCc
Confidence 345566666666677777777 555788898889999999988632 234567999999999999 466889999999
Q ss_pred cEEEEEeCCceEEE-EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 77 SIAIFRVGSWQLEK-LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 77 ~i~~~d~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
.|++||++.+.... .+...|... |.-++|+.+..+|++|++||.++|||+|+-+
T Consensus 281 sIrIWDiRs~~~~~~~~~kAh~sD-VNVISWnr~~~lLasG~DdGt~~iwDLR~~~ 335 (440)
T KOG0302|consen 281 SIRIWDIRSGPKKAAVSTKAHNSD-VNVISWNRREPLLASGGDDGTLSIWDLRQFK 335 (440)
T ss_pred eEEEEEecCCCccceeEeeccCCc-eeeEEccCCcceeeecCCCceEEEEEhhhcc
Confidence 99999999984433 333455555 9999999988899999999999999998643
No 77
>KOG1407|consensus
Probab=99.81 E-value=2.5e-18 Score=105.94 Aligned_cols=122 Identities=16% Similarity=0.254 Sum_probs=107.1
Q ss_pred eeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEE
Q psy11518 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 92 (139)
..+..+.| ++.+++.....|.|.|.....-+++..++.|.....|+.|+|+|+++|+|+.|..+.+||++...+.+.+
T Consensus 148 ~e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~i 227 (313)
T KOG1407|consen 148 FEVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCI 227 (313)
T ss_pred ceeeeeeecCCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheee
Confidence 34555665 6777777777899999999999999999999999999999999999999999999999999988887777
Q ss_pred EeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.....+|..++|+.+|++|+++++|..|-|=+.++|..+..+..
T Consensus 228 --sRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~ 271 (313)
T KOG1407|consen 228 --SRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPC 271 (313)
T ss_pred --ccccCceEEEEeccCcceeeccCccceEEeEecccCCeEEEeec
Confidence 33445599999999999999999999999999999999887764
No 78
>KOG0264|consensus
Probab=99.80 E-value=1.4e-18 Score=113.27 Aligned_cols=119 Identities=25% Similarity=0.401 Sum_probs=97.1
Q ss_pred eecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCC-ceeeEEEecCCCeEEEEECCC-CCEEEEecCCCcEEEEEeC
Q psy11518 10 THSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR-KQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 10 ~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~ 84 (139)
..+|...+.|++| ++..||+|+.|++|.+||+++. +++..+.+|...|.++.|+|. ...||+++.|+.+.+||+.
T Consensus 268 ~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh~etvLASSg~D~rl~vWDls 347 (422)
T KOG0264|consen 268 VKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPHNETVLASSGTDRRLNVWDLS 347 (422)
T ss_pred ccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCCCCceeEecccCCcEEEEecc
Confidence 3468888999887 8889999999999999999875 678899999999999999995 5678999999999999985
Q ss_pred Cce------------EEEEEEeCCCCcceeEEEEccCCcE-EEEEcCCCeEEEEEcC
Q psy11518 85 SWQ------------LEKLFKKAHKGTAVNHISIHPSGKL-ALSVGKDKTLRTWNLV 128 (139)
Q Consensus 85 ~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~~ 128 (139)
.-. +...|..+.+...|..+.|+|+..+ ++++++|+.+.||.+.
T Consensus 348 ~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 348 RIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred ccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEEEeecc
Confidence 421 1122333444445999999998885 5677899999999986
No 79
>KOG2110|consensus
Probab=99.80 E-value=1e-17 Score=107.36 Aligned_cols=129 Identities=21% Similarity=0.372 Sum_probs=108.6
Q ss_pred eeEEEEEee-cceeeEEEEec--CCcEEEEe--CCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCc
Q psy11518 3 TLTQTFVTH-SHTASVRSVAA--TSKLAASS--GADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS 77 (139)
Q Consensus 3 ~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~--~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 77 (139)
++.+++... .+...+.++++ .+.+++-- ...|.|.+||..+-++...+..|++.+.+++|+++|.+|||++..|+
T Consensus 117 klLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGT 196 (391)
T KOG2110|consen 117 KLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGT 196 (391)
T ss_pred eeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCce
Confidence 445555554 45556778887 44466633 25689999999999999999999999999999999999999999998
Q ss_pred -EEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 78 -IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 78 -i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
|+++.+.+++.+..+..+.....|.+++|+|++++|.+.+..++|++|.+++..
T Consensus 197 VIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 197 VIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred EEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEecccc
Confidence 689999999999999777666669999999999999999999999999987543
No 80
>KOG0640|consensus
Probab=99.80 E-value=5.7e-19 Score=111.40 Aligned_cols=123 Identities=27% Similarity=0.400 Sum_probs=102.5
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccC------------------CceeeEEEecCCCeEEEEECCCCCEEEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVK------------------RKQSGALMQHEGTITCLKFTPEGSHLIS 71 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 71 (139)
.|..++.+-.| ||.++++|+.|.+|+|.|++. ...+.++..|...|+++.|+|....|++
T Consensus 110 ~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS 189 (430)
T KOG0640|consen 110 SHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILIS 189 (430)
T ss_pred ecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEe
Confidence 56666666665 999999999999999999861 1235677789999999999999999999
Q ss_pred ecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 72 CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 72 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
++.|+.|++||.........++.-....+|.++.|+|.|.++++|.+...+++||+.+.+...
T Consensus 190 ~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfv 252 (430)
T KOG0640|consen 190 GSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFV 252 (430)
T ss_pred ccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEee
Confidence 999999999999876655544444444559999999999999999999999999999876543
No 81
>KOG0643|consensus
Probab=99.80 E-value=6.6e-18 Score=104.49 Aligned_cols=127 Identities=21% Similarity=0.245 Sum_probs=106.8
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEE-------------------------------------
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGAL------------------------------------- 50 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~------------------------------------- 50 (139)
..||.+.|.|+.. +.+.+++|+.|.++++||+++|+.+..+
T Consensus 48 y~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi 127 (327)
T KOG0643|consen 48 YDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDI 127 (327)
T ss_pred ecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEc
Confidence 3478888887775 8899999999999999999988766533
Q ss_pred ----------------EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEE
Q psy11518 51 ----------------MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLAL 114 (139)
Q Consensus 51 ----------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 114 (139)
..+.+.++...|.|-+.++++|..||.|..||++++.........|... |+.++++++..+++
T Consensus 128 ~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~-Ind~q~s~d~T~Fi 206 (327)
T KOG0643|consen 128 RDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSK-INDLQFSRDRTYFI 206 (327)
T ss_pred cCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccc-cccccccCCcceEE
Confidence 1234568888999999999999999999999999987665554555554 99999999999999
Q ss_pred EEcCCCeEEEEEcCCCceeEEEe
Q psy11518 115 SVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 115 ~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+++.|.+-.+||+++-+.+..+.
T Consensus 207 T~s~Dttakl~D~~tl~v~Kty~ 229 (327)
T KOG0643|consen 207 TGSKDTTAKLVDVRTLEVLKTYT 229 (327)
T ss_pred ecccCccceeeeccceeeEEEee
Confidence 99999999999999988777654
No 82
>KOG1446|consensus
Probab=99.80 E-value=3.3e-17 Score=103.04 Aligned_cols=131 Identities=24% Similarity=0.362 Sum_probs=93.4
Q ss_pred EEEEEeecceeeEEEEe--cCCcEEEEeCCCCeEEEEEccCCceeeEEEe------------------------------
Q psy11518 5 TQTFVTHSHTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQ------------------------------ 52 (139)
Q Consensus 5 ~~~~~~~~~~~~v~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~------------------------------ 52 (139)
++.|. ||...|+.++ |-++.+++++.|.+|++||++..++...+..
T Consensus 93 lRYF~--GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~R 170 (311)
T KOG1446|consen 93 LRYFP--GHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDLR 170 (311)
T ss_pred EEEcC--CCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEEEec
Confidence 44455 6666666555 6678999999999999999986544332211
Q ss_pred ---------------cCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcc-eeEEEEccCCcEEEEE
Q psy11518 53 ---------------HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA-VNHISIHPSGKLALSV 116 (139)
Q Consensus 53 ---------------~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~ 116 (139)
.....+.+.|+|+|++++.+...+.+.+.|.-.|..+..+........ ....+|.||++++++|
T Consensus 171 s~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~g 250 (311)
T KOG1446|consen 171 SFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSG 250 (311)
T ss_pred ccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEe
Confidence 123456677777777777777777777777777776666633322221 3567899999999999
Q ss_pred cCCCeEEEEEcCCCceeEEEe
Q psy11518 117 GKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 117 ~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+.||+|++|++++++.+..+.
T Consensus 251 s~dg~i~vw~~~tg~~v~~~~ 271 (311)
T KOG1446|consen 251 SDDGTIHVWNLETGKKVAVLR 271 (311)
T ss_pred cCCCcEEEEEcCCCcEeeEec
Confidence 999999999999999887653
No 83
>KOG0274|consensus
Probab=99.80 E-value=7.7e-18 Score=115.99 Aligned_cols=122 Identities=22% Similarity=0.349 Sum_probs=108.7
Q ss_pred eecceeeEEEEecC--CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 10 THSHTASVRSVAAT--SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 10 ~~~~~~~v~~~~~~--~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
..+|.+.|.++.+. +.++++|+.|.++++||..++++...+.+|.+.+.++.. ....+++|+.|.+|++|++.++.
T Consensus 245 l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~--~~~~~~sgs~D~tVkVW~v~n~~ 322 (537)
T KOG0274|consen 245 LVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTI--DPFLLVSGSRDNTVKVWDVTNGA 322 (537)
T ss_pred ccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEc--cCceEeeccCCceEEEEeccCcc
Confidence 56899999999985 999999999999999999999999999999999998876 44578889999999999999999
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.+..+ .+|... |.++..+ +.++++|+.|+.|.+||+.+++.+..++
T Consensus 323 ~l~l~-~~h~~~-V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~ 368 (537)
T KOG0274|consen 323 CLNLL-RGHTGP-VNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLS 368 (537)
T ss_pred eEEEe-cccccc-EEEEEec--CCEEEEEecCceEEEEEhhhceeeeeec
Confidence 99888 445555 9999987 8899999999999999999998887653
No 84
>KOG0289|consensus
Probab=99.80 E-value=6.8e-18 Score=110.21 Aligned_cols=112 Identities=21% Similarity=0.319 Sum_probs=99.3
Q ss_pred EEEEe--cCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEe
Q psy11518 17 VRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 17 v~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 94 (139)
+.+.. +||.++.+|..|+.|++||+.+......|.+|.++|..++|+.+|-+|++++.|+.|++||++..+....+..
T Consensus 350 ~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l 429 (506)
T KOG0289|consen 350 YTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQL 429 (506)
T ss_pred eEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeec
Confidence 44444 4999999999999999999999999999999999999999999999999999999999999999888888865
Q ss_pred CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 95 AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
..... +.+++|.+.|.+++.++.|=+|++++-.+
T Consensus 430 ~~~~~-v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~ 463 (506)
T KOG0289|consen 430 DEKKE-VNSLSFDQSGTYLGIAGSDLQVYICKKKT 463 (506)
T ss_pred ccccc-ceeEEEcCCCCeEEeecceeEEEEEeccc
Confidence 55554 99999999999999999888888777443
No 85
>KOG1034|consensus
Probab=99.79 E-value=2.3e-18 Score=109.01 Aligned_cols=126 Identities=23% Similarity=0.364 Sum_probs=106.6
Q ss_pred eEEEEEeecceeeEEEEec------CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCC-CCEEEEecCCC
Q psy11518 4 LTQTFVTHSHTASVRSVAA------TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE-GSHLISCSDDG 76 (139)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~------~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~ 76 (139)
.++.+....+......++| ...++++|+.-|.|+|.|+.+++....+.+|...|+.+.+.|+ .+++++++.|.
T Consensus 79 ~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~ 158 (385)
T KOG1034|consen 79 LLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDH 158 (385)
T ss_pred eeeeccCCCCCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCc
Confidence 3445554445566666665 2668999999999999999999999999999999999999995 57889999999
Q ss_pred cEEEEEeCCceEEEEEEe--CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 77 SIAIFRVGSWQLEKLFKK--AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 77 ~i~~~d~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
.|++|++++..++..+.- .|... |.++.|++++.+++++|.|..|.+|++...
T Consensus 159 svRlwnI~~~~Cv~VfGG~egHrde-VLSvD~~~~gd~i~ScGmDhslk~W~l~~~ 213 (385)
T KOG1034|consen 159 SVRLWNIQTDVCVAVFGGVEGHRDE-VLSVDFSLDGDRIASCGMDHSLKLWRLNVK 213 (385)
T ss_pred eEEEEeccCCeEEEEecccccccCc-EEEEEEcCCCCeeeccCCcceEEEEecChh
Confidence 999999999999888742 34555 999999999999999999999999999844
No 86
>KOG1273|consensus
Probab=99.79 E-value=3.9e-18 Score=107.75 Aligned_cols=122 Identities=19% Similarity=0.189 Sum_probs=99.0
Q ss_pred EEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEe
Q psy11518 17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 17 v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 94 (139)
..|+.| .|.+||+|+.||.|.|||+.+......+.+|..+|++++||++|+.|++++.|..+.+||+..+.+...+..
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf 105 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF 105 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence 445555 899999999999999999999998888999999999999999999999999999999999988765543321
Q ss_pred CC----------CC----------------------------------cceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 95 AH----------KG----------------------------------TAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 95 ~~----------~~----------------------------------~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
.. .. ....+..|++.|+++++|...|.+.++|..+.
T Consensus 106 ~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~ 185 (405)
T KOG1273|consen 106 DSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAETL 185 (405)
T ss_pred cCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecchh
Confidence 10 00 00122347788999999999999999999998
Q ss_pred ceeEEEec
Q psy11518 131 RSAYITNL 138 (139)
Q Consensus 131 ~~~~~~~~ 138 (139)
+.+..+.+
T Consensus 186 e~vas~ri 193 (405)
T KOG1273|consen 186 ECVASFRI 193 (405)
T ss_pred eeeeeeee
Confidence 88776653
No 87
>KOG0305|consensus
Probab=99.79 E-value=2.2e-18 Score=115.87 Aligned_cols=122 Identities=24% Similarity=0.342 Sum_probs=108.3
Q ss_pred ceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeE-EEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEE
Q psy11518 13 HTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGA-LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (139)
Q Consensus 13 ~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 91 (139)
|...|.+++|++..+.+|+.++.|..+|+...+.... +.+|...|..+.|+++++++|+|+.|+.+.+||.....+...
T Consensus 259 h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~ 338 (484)
T KOG0305|consen 259 HASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFT 338 (484)
T ss_pred cCceeEEEeccCceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEE
Confidence 8899999999999999999999999999988766655 889999999999999999999999999999999977777777
Q ss_pred EEeCCCCcceeEEEEcc-CCcEEEEEc--CCCeEEEEEcCCCceeEEE
Q psy11518 92 FKKAHKGTAVNHISIHP-SGKLALSVG--KDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~-~~~~l~~~~--~d~~i~i~d~~~~~~~~~~ 136 (139)
+ ..|... |-.++|+| ....|++|+ .|+.|++||..+++.+..+
T Consensus 339 ~-~~H~aA-VKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~v 384 (484)
T KOG0305|consen 339 F-TEHTAA-VKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSV 384 (484)
T ss_pred E-ecccee-eeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccc
Confidence 6 667766 99999999 556888876 5999999999999887654
No 88
>KOG0306|consensus
Probab=99.78 E-value=5.1e-18 Score=117.02 Aligned_cols=121 Identities=20% Similarity=0.428 Sum_probs=108.6
Q ss_pred EEeecceeeEEEE--ecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 8 FVTHSHTASVRSV--AATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 8 ~~~~~~~~~v~~~--~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
+..-||.-||.|+ +||+++++||+.|..|++|-++=|.+...+.+|+..|.++.|.|+...+.++++|+.++.||...
T Consensus 544 lsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~k 623 (888)
T KOG0306|consen 544 LSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEK 623 (888)
T ss_pred eeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhh
Confidence 4455777776665 56999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
.+.+..+ ..|... |++++..|+|.++++++.|..|++|.....
T Consensus 624 Fe~iq~L-~~H~~e-v~cLav~~~G~~vvs~shD~sIRlwE~tde 666 (888)
T KOG0306|consen 624 FEEIQKL-DGHHSE-VWCLAVSPNGSFVVSSSHDKSIRLWERTDE 666 (888)
T ss_pred hhhheee-ccchhe-eeeeEEcCCCCeEEeccCCceeEeeeccCc
Confidence 9988888 566665 999999999999999999999999987553
No 89
>KOG0274|consensus
Probab=99.78 E-value=1.2e-17 Score=114.99 Aligned_cols=122 Identities=25% Similarity=0.392 Sum_probs=108.8
Q ss_pred EeecceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 9 VTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 9 ~~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
...+|...+.++......+++|+.|.+|++|++.+++.+..+.+|...|.++..+ +.++++|+.|+.|++||..++++
T Consensus 286 ~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~c 363 (537)
T KOG0274|consen 286 SLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKC 363 (537)
T ss_pred EecCCCceEEEEEccCceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhcee
Confidence 3447888999998888899999999999999999999999999999999999996 78999999999999999999999
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC-ceeEE
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG-RSAYI 135 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~ 135 (139)
+..+ ..|... |.++.+.+. ..+++|+.|+.|++||+++. +.+..
T Consensus 364 l~sl-~gH~~~-V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~t 408 (537)
T KOG0274|consen 364 LKSL-SGHTGR-VYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHT 408 (537)
T ss_pred eeee-cCCcce-EEEEEecCc-ceEEeeeeccceEeecCCchhhhhhh
Confidence 9998 566666 999988755 89999999999999999998 55443
No 90
>KOG1274|consensus
Probab=99.78 E-value=9.9e-18 Score=117.40 Aligned_cols=124 Identities=21% Similarity=0.339 Sum_probs=105.9
Q ss_pred EEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEe--------cCCCeEEEEECCCCCEEEEecCC
Q psy11518 6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQ--------HEGTITCLKFTPEGSHLISCSDD 75 (139)
Q Consensus 6 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d 75 (139)
+.....+|.++|.++.+ ++++||+.+.||.|++|++.++....++.+ ....+..++|+|++..++..+.|
T Consensus 130 ~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d 209 (933)
T KOG1274|consen 130 QEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVD 209 (933)
T ss_pred hheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccC
Confidence 34455689999999987 899999999999999999998877665543 13446778999998888888889
Q ss_pred CcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 76 ~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
+.|++|+..++.....+...+....+..++|+|+|++|++++.+|.|.|||.++
T Consensus 210 ~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 210 NTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred CeEEEEccCCceeheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence 999999999999999886666665589999999999999999999999999984
No 91
>KOG0306|consensus
Probab=99.78 E-value=5.6e-18 Score=116.82 Aligned_cols=121 Identities=21% Similarity=0.281 Sum_probs=106.7
Q ss_pred eeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEE
Q psy11518 14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 91 (139)
...++|+.. +..++|+|..||.|++|+..+.....++.+|...|+++.|+..|..|++|+.|+.|.+||+-...-...
T Consensus 65 k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~r 144 (888)
T KOG0306|consen 65 KAEVTCLRSSDDILLLAVGYADGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFR 144 (888)
T ss_pred cceEEEeeccCCcceEEEEecCceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEE
Confidence 356777775 666789999999999999999999999999999999999999999999999999999999987766777
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+ .+|+.. |+..-|..+.+++++.+-|+.|++||+.+......+
T Consensus 145 L-~GHkd~-iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Th 187 (888)
T KOG0306|consen 145 L-RGHKDS-ITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETH 187 (888)
T ss_pred e-ecchHH-HhHHhccCCCeEEEEeccCceEEEEecccceeeeEE
Confidence 7 567766 888889888899999999999999999998776554
No 92
>KOG1445|consensus
Probab=99.78 E-value=1.1e-18 Score=118.95 Aligned_cols=117 Identities=22% Similarity=0.304 Sum_probs=102.7
Q ss_pred eeeEEEEec---CCcEEEEeCCCCeEEEEEccCC-------ceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEE
Q psy11518 14 TASVRSVAA---TSKLAASSGADETVVLYDMVKR-------KQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 14 ~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d 82 (139)
...|+++.| |.+.|++++.||.|++|.+..+ .+...+..|...|+.+.|+| ....|++++.|-+|++||
T Consensus 627 gt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWD 706 (1012)
T KOG1445|consen 627 GTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWD 706 (1012)
T ss_pred CceeeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeee
Confidence 345777776 8899999999999999998654 45567889999999999999 567899999999999999
Q ss_pred eCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
+++......+ ..|.+. |.+++|+|+|+.+++.+-||+|++|+.+++..
T Consensus 707 l~~~~~~~~l-~gHtdq-If~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~ 754 (1012)
T KOG1445|consen 707 LANAKLYSRL-VGHTDQ-IFGIAWSPDGRRIATVCKDGTLRVYEPRSREQ 754 (1012)
T ss_pred hhhhhhhhee-ccCcCc-eeEEEECCCCcceeeeecCceEEEeCCCCCCC
Confidence 9999888887 677777 99999999999999999999999999987643
No 93
>KOG0646|consensus
Probab=99.78 E-value=1.8e-17 Score=108.80 Aligned_cols=123 Identities=23% Similarity=0.442 Sum_probs=102.5
Q ss_pred eeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC-------
Q psy11518 14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG------- 84 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~------- 84 (139)
++++.|+.- +|.+++.|+..+.+.+|.+.+|..+..+..|-..|+|+.|+.|+.++++|+.||.|.+|++.
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~ 160 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADN 160 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccccc
Confidence 455666664 88888888899999999999999999999999999999999999999999999999999872
Q ss_pred --CceEEEEEEeCCCCcceeEEEEccCC--cEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 85 --SWQLEKLFKKAHKGTAVNHISIHPSG--KLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 85 --~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+..+...+ ..|. -+|+++...+.| ..+++++.|+++++||+..+..+..+.+
T Consensus 161 ~~~~~p~~~f-~~Ht-lsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~f 216 (476)
T KOG0646|consen 161 DHSVKPLHIF-SDHT-LSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITF 216 (476)
T ss_pred CCCccceeee-ccCc-ceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEec
Confidence 22334444 3444 449998887653 5899999999999999999988887654
No 94
>KOG0278|consensus
Probab=99.78 E-value=1.9e-17 Score=101.85 Aligned_cols=122 Identities=24% Similarity=0.356 Sum_probs=93.1
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEe-----------------------------------
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQ----------------------------------- 52 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~----------------------------------- 52 (139)
..+|...|..+.| ..+.+++...|+.|++||..++..+..+.-
T Consensus 139 ~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~~l 218 (334)
T KOG0278|consen 139 ISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFGLL 218 (334)
T ss_pred hcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEecCceeEEeccccccce
Confidence 3467788888877 677788889999999999998877665531
Q ss_pred ----cCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 53 ----HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 53 ----~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
-...|.+.+++|+...+++|+.|..+..||..++..+..+...|.++ |.++.|+|+|...++|++||+|++|.+.
T Consensus 219 Ks~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gp-VhcVrFSPdGE~yAsGSEDGTirlWQt~ 297 (334)
T KOG0278|consen 219 KSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGP-VHCVRFSPDGELYASGSEDGTIRLWQTT 297 (334)
T ss_pred eeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCc-eEEEEECCCCceeeccCCCceEEEEEec
Confidence 01134555666766677777777777777777777777764555555 9999999999999999999999999887
Q ss_pred CCce
Q psy11518 129 KGRS 132 (139)
Q Consensus 129 ~~~~ 132 (139)
-++.
T Consensus 298 ~~~~ 301 (334)
T KOG0278|consen 298 PGKT 301 (334)
T ss_pred CCCc
Confidence 6654
No 95
>KOG0639|consensus
Probab=99.77 E-value=8.5e-19 Score=116.55 Aligned_cols=115 Identities=23% Similarity=0.435 Sum_probs=100.0
Q ss_pred cCCcEEEEeCCCCeEEEEEccCCcee--eEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCc
Q psy11518 22 ATSKLAASSGADETVVLYDMVKRKQS--GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT 99 (139)
Q Consensus 22 ~~~~~l~~~~~~~~v~i~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 99 (139)
+||+.|++|++..++.|||+....+. .++....-...+++.+||.+..+++..||.|.+||+++......+ ..|..+
T Consensus 475 pdgrtLivGGeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~Vrqf-qGhtDG 553 (705)
T KOG0639|consen 475 PDGRTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQF-QGHTDG 553 (705)
T ss_pred CCCceEEeccccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecc-cCCCCC
Confidence 49999999999999999999765443 344443445678889999999999999999999999999999988 778877
Q ss_pred ceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 100 AVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 100 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+.||..+++|..|.+|+-|++|+.||+++++.++...|
T Consensus 554 -ascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF 591 (705)
T KOG0639|consen 554 -ASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDF 591 (705)
T ss_pred -ceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhh
Confidence 99999999999999999999999999999998877654
No 96
>KOG0772|consensus
Probab=99.77 E-value=6.2e-18 Score=112.56 Aligned_cols=130 Identities=19% Similarity=0.232 Sum_probs=100.0
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCC--cee-eEEEecCC--CeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR--KQS-GALMQHEG--TITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~--~~~-~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
..+...++..+.| +++.+|+|..||+|.+|+.... .+. ..-+.|.. .|+|++|+++|++|++-+.|+.+++||
T Consensus 313 ~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWD 392 (641)
T KOG0772|consen 313 AGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWD 392 (641)
T ss_pred CCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeee
Confidence 3345667777777 9999999999999999997433 222 23346766 899999999999999999999999999
Q ss_pred eCCceE-EEEEEeCCCCcceeEEEEccCCcEEEEEcC------CCeEEEEEcCCCceeEEEecC
Q psy11518 83 VGSWQL-EKLFKKAHKGTAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNLS 139 (139)
Q Consensus 83 ~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~ 139 (139)
+++... +..........+-+.++|+|+.++|++|.. .|.+.+||..+...++.+.++
T Consensus 393 Lrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~ 456 (641)
T KOG0772|consen 393 LRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDIS 456 (641)
T ss_pred ccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCC
Confidence 988653 222211222233578999999999999863 578999999999988887653
No 97
>KOG1446|consensus
Probab=99.76 E-value=2e-16 Score=99.57 Aligned_cols=132 Identities=24% Similarity=0.365 Sum_probs=111.5
Q ss_pred eeeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC--CCc
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD--DGS 77 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~ 77 (139)
|+..+.|.. ....+.++.| +|..++++++|.++++||..+++.+.++..++-.+..+.|....+.+..++. |..
T Consensus 4 ~~~ak~f~~--~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~t 81 (311)
T KOG1446|consen 4 FRPAKVFRE--TNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDT 81 (311)
T ss_pred ccccccccc--CCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCc
Confidence 455566654 4566777777 8999999999999999999999999999988888899999876666665555 888
Q ss_pred EEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
|+..++.+.+.++-+ .+|... |.+++.+|-+..+++++.|++|++||++..+....+.
T Consensus 82 IryLsl~dNkylRYF-~GH~~~-V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~ 139 (311)
T KOG1446|consen 82 IRYLSLHDNKYLRYF-PGHKKR-VNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLN 139 (311)
T ss_pred eEEEEeecCceEEEc-CCCCce-EEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEe
Confidence 999999999999998 666665 9999999999999999999999999999877766554
No 98
>KOG0300|consensus
Probab=99.76 E-value=1.4e-17 Score=105.70 Aligned_cols=121 Identities=18% Similarity=0.261 Sum_probs=105.5
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
.+.+|...|.+..| .++.+++++.|.+-.+||++++.++..+.+|....+.++-+|..+++++.+.|-+.++||++..
T Consensus 267 ~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFRea 346 (481)
T KOG0300|consen 267 RLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREA 346 (481)
T ss_pred eeeccccceEehhhhcCcceeeeeeccccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhh
Confidence 45578999999998 8999999999999999999999999999999999999999999999999999999999999865
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
-..-....+|... |++..|..+ ..+++|++|++|.+||+++-+
T Consensus 347 I~sV~VFQGHtdt-VTS~vF~~d-d~vVSgSDDrTvKvWdLrNMR 389 (481)
T KOG0300|consen 347 IQSVAVFQGHTDT-VTSVVFNTD-DRVVSGSDDRTVKVWDLRNMR 389 (481)
T ss_pred cceeeeecccccc-eeEEEEecC-CceeecCCCceEEEeeecccc
Confidence 4433333666666 999999865 458899999999999998754
No 99
>KOG2111|consensus
Probab=99.76 E-value=1.3e-16 Score=100.75 Aligned_cols=128 Identities=19% Similarity=0.304 Sum_probs=105.7
Q ss_pred eEEEEEeecceeeEEEEec--CCcEEE-EeCCCCeEEEEEccCCce--eeEEEecCCCeEEEEECCCCCEEEEecCCCc-
Q psy11518 4 LTQTFVTHSHTASVRSVAA--TSKLAA-SSGADETVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSDDGS- 77 (139)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~--~~~~l~-~~~~~~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~- 77 (139)
+.+.+.+...+....++.+ +..+|+ -|-.-|+|.|-|+...+. ......|.+.|.|++.+.+|..+||++..|+
T Consensus 126 ~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTL 205 (346)
T KOG2111|consen 126 LLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTL 205 (346)
T ss_pred heeeeecccCCCceEeecCCCCceEEEcCCCccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEE
Confidence 4455555555556777777 444444 344679999999876554 5778899999999999999999999999998
Q ss_pred EEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
|++||..++.++..+..+.....|.+++|+|+..+|+++++.|+++||.++...
T Consensus 206 IRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 206 IRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred EEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence 689999999999999777666669999999999999999999999999998643
No 100
>KOG1407|consensus
Probab=99.76 E-value=2.6e-17 Score=101.58 Aligned_cols=116 Identities=21% Similarity=0.259 Sum_probs=100.4
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
.+.|+..+.|+.| +|+++|+|+.|..+.+||++..-+...+..+.-+|..++|+.+|++||+++.|..|-+=++++|.
T Consensus 185 i~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~~lASaSEDh~IDIA~vetGd 264 (313)
T KOG1407|consen 185 IKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGRMLASASEDHFIDIAEVETGD 264 (313)
T ss_pred cccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcceeeccCccceEEeEecccCC
Confidence 3467788888887 99999999999999999999998899999999999999999999999999999999999999999
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCC---------CeEEEEEcC
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKD---------KTLRTWNLV 128 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~i~d~~ 128 (139)
.+..++ +.+. ...++|+|...+|+-+.+| |.+++|-+.
T Consensus 265 ~~~eI~--~~~~-t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~~ 311 (313)
T KOG1407|consen 265 RVWEIP--CEGP-TFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGLS 311 (313)
T ss_pred eEEEee--ccCC-ceeEEecCCCceeeEEecCCCCccccccceeEEecCC
Confidence 998883 3333 8899999999999877653 566666554
No 101
>KOG0270|consensus
Probab=99.75 E-value=1.3e-17 Score=108.88 Aligned_cols=127 Identities=23% Similarity=0.320 Sum_probs=103.1
Q ss_pred EEeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEe
Q psy11518 8 FVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~ 83 (139)
+...+|...|.+++| ..+.|++|+.|.+|.+||+.++++..++..|...|.++.|+| .+..|++|+.|+++.+.|+
T Consensus 237 ~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~ 316 (463)
T KOG0270|consen 237 NSASGHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDC 316 (463)
T ss_pred cccccchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeec
Confidence 345578888888888 566899999999999999999999999999999999999999 6788999999999999999
Q ss_pred CCceE-EEEEEeCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCC-ceeEEEe
Q psy11518 84 GSWQL-EKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKG-RSAYITN 137 (139)
Q Consensus 84 ~~~~~-~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~-~~~~~~~ 137 (139)
+.... ...+ ...+. |..++|+|... .++++..||.|+-+|+|+. +++.++.
T Consensus 317 R~~~~s~~~w--k~~g~-VEkv~w~~~se~~f~~~tddG~v~~~D~R~~~~~vwt~~ 370 (463)
T KOG0270|consen 317 RDPSNSGKEW--KFDGE-VEKVAWDPHSENSFFVSTDDGTVYYFDIRNPGKPVWTLK 370 (463)
T ss_pred cCccccCceE--Eeccc-eEEEEecCCCceeEEEecCCceEEeeecCCCCCceeEEE
Confidence 85222 2222 11233 88999999665 6777889999999999987 6666543
No 102
>KOG0313|consensus
Probab=99.75 E-value=5.7e-17 Score=104.33 Aligned_cols=117 Identities=22% Similarity=0.328 Sum_probs=100.7
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccC-------------------------CceeeEEEecCCCeEEEEEC
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVK-------------------------RKQSGALMQHEGTITCLKFT 63 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~-------------------------~~~~~~~~~~~~~v~~~~~~ 63 (139)
.||...|-+++. ++..+++|+.|..|.+|+.++ ..++.++.+|..+|.++.|+
T Consensus 190 ~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~ 269 (423)
T KOG0313|consen 190 RGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWS 269 (423)
T ss_pred cccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEc
Confidence 388888888885 899999999999999999321 23556788999999999999
Q ss_pred CCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 64 PEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 64 ~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
+ ...+.+++.|.+|+.||+.++.....+... .++.+++.+|..++|++|+.|+.+++||.|++.
T Consensus 270 d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~---ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~ 333 (423)
T KOG0313|consen 270 D-ATVIYSVSWDHTIKVWDLETGGLKSTLTTN---KSLNCISYSPLSKLLASGSSDRHIRLWDPRTGD 333 (423)
T ss_pred C-CCceEeecccceEEEEEeecccceeeeecC---cceeEeecccccceeeecCCCCceeecCCCCCC
Confidence 8 678899999999999999999988877322 238999999999999999999999999999863
No 103
>KOG4283|consensus
Probab=99.75 E-value=4.4e-17 Score=102.31 Aligned_cols=110 Identities=25% Similarity=0.434 Sum_probs=92.1
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCE-EEEecCCCcEEEEEeCCc-eEEEE---------
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSH-LISCSDDGSIAIFRVGSW-QLEKL--------- 91 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~-~~~~~--------- 91 (139)
.-.++++|..+-.|++-|+.+|..-+++.+|...|.++.|+|...+ |++|+.||.|++||++.. .+...
T Consensus 157 sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~ 236 (397)
T KOG4283|consen 157 SHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRP 236 (397)
T ss_pred cceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEeecccCccC
Confidence 4567889999999999999999999999999999999999998776 579999999999999753 11111
Q ss_pred --E--EeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 92 --F--KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 92 --~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
. ...|.+ .+..++|..++.++++++.|.++++|+..+|+..
T Consensus 237 p~~~~n~ah~g-kvngla~tSd~~~l~~~gtd~r~r~wn~~~G~nt 281 (397)
T KOG4283|consen 237 PILKTNTAHYG-KVNGLAWTSDARYLASCGTDDRIRVWNMESGRNT 281 (397)
T ss_pred ccccccccccc-eeeeeeecccchhhhhccCccceEEeecccCccc
Confidence 1 123333 4999999999999999999999999999988653
No 104
>KOG0305|consensus
Probab=99.74 E-value=4.3e-17 Score=109.76 Aligned_cols=120 Identities=24% Similarity=0.275 Sum_probs=103.6
Q ss_pred eeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEe-cCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE
Q psy11518 14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQ-HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 90 (139)
...++++.| +|.+|++|..+|.|.|||..+.+.+..+.+ |...|.+++|. ...+.+|+.++.|..+|++..+...
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~ 294 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVV 294 (484)
T ss_pred CCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhh
Confidence 567778877 899999999999999999999999999888 99999999996 6789999999999999998877555
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.....|... |..+.|++|+.++++|+.|+.+.|||.....++..+
T Consensus 295 ~~~~~H~qe-VCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~ 339 (484)
T KOG0305|consen 295 STLQGHRQE-VCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTF 339 (484)
T ss_pred hhhhcccce-eeeeEECCCCCeeccCCCccceEeccCCCccccEEE
Confidence 522344444 999999999999999999999999999776666544
No 105
>KOG1332|consensus
Probab=99.74 E-value=5.7e-17 Score=99.29 Aligned_cols=119 Identities=21% Similarity=0.323 Sum_probs=98.6
Q ss_pred cceeeEEEEe--cCCcEEEEeCCCCeEEEEEccCC---ceeeEEEecCCCeEEEEECC--CCCEEEEecCCCcEEEEEeC
Q psy11518 12 SHTASVRSVA--ATSKLAASSGADETVVLYDMVKR---KQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 12 ~~~~~v~~~~--~~~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~ 84 (139)
.|...|-+.. +-|+.|++++.|++|+|+..+.. ..+.++.+|.++|..++|.. -|.+||+++.||.|.+|.-.
T Consensus 9 ~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~ 88 (299)
T KOG1332|consen 9 QHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEE 88 (299)
T ss_pred hhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecC
Confidence 5666555544 47999999999999999999765 45788999999999999965 79999999999999999999
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCC--cEEEEEcCCCeEEEEEcCCC
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSG--KLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~ 130 (139)
+++.........+...|++++|.|.+ -.|++++.||.|.|.+.++.
T Consensus 89 ~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~ 136 (299)
T KOG1332|consen 89 NGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSS 136 (299)
T ss_pred CCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCC
Confidence 88765555444445559999999965 48889999999999998765
No 106
>KOG0647|consensus
Probab=99.74 E-value=1.4e-16 Score=100.02 Aligned_cols=116 Identities=17% Similarity=0.254 Sum_probs=98.4
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCC--CEEEEecCCCcEEEEEeCCce
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEG--SHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~~~d~~~~~ 87 (139)
.|.+++++++| +|..+++|+.|+.+++||+.++ .+..+..|.++|.++.|-+.. ..|+||+.|.+|+.||.+...
T Consensus 70 ~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~ 148 (347)
T KOG0647|consen 70 SHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSN 148 (347)
T ss_pred ccCCCeEEEEEccCCceEEeeccCCceEEEEccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCC
Confidence 47889999999 8999999999999999999999 456677899999999998754 489999999999999999988
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
+...+..+.+ ++++.. ...+++++..++.|.+|+|+++..+
T Consensus 149 pv~t~~LPeR---vYa~Dv--~~pm~vVata~r~i~vynL~n~~te 189 (347)
T KOG0647|consen 149 PVATLQLPER---VYAADV--LYPMAVVATAERHIAVYNLENPPTE 189 (347)
T ss_pred eeeeeeccce---eeehhc--cCceeEEEecCCcEEEEEcCCCcch
Confidence 8888755554 666554 4668889999999999999876543
No 107
>KOG1539|consensus
Probab=99.73 E-value=4.9e-16 Score=108.31 Aligned_cols=125 Identities=20% Similarity=0.307 Sum_probs=104.5
Q ss_pred eeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEE---EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE
Q psy11518 14 TASVRSVAATSKLAASSGADETVVLYDMVKRKQSGAL---MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 14 ~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 90 (139)
.....|+++-|++.+.|...|.|-+|++.+|-....+ +.|..+|+.++....++.+++++.+|.+++||..+..++.
T Consensus 450 ~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~ 529 (910)
T KOG1539|consen 450 NATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKK 529 (910)
T ss_pred ceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcceee
Confidence 3455666779999999999999999999999888777 5899999999999888999999999999999987654332
Q ss_pred EEE---------------------------------------eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 91 LFK---------------------------------------KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 91 ~~~---------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
.+. ...++.+|++++|+|||+|+++++.|++|++||+.++.
T Consensus 530 ~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~ 609 (910)
T KOG1539|consen 530 SLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGT 609 (910)
T ss_pred eeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcc
Confidence 211 11234459999999999999999999999999999999
Q ss_pred eeEEEec
Q psy11518 132 SAYITNL 138 (139)
Q Consensus 132 ~~~~~~~ 138 (139)
.+-.+.+
T Consensus 610 lID~~~v 616 (910)
T KOG1539|consen 610 LIDGLLV 616 (910)
T ss_pred eeeeEec
Confidence 8876654
No 108
>KOG2048|consensus
Probab=99.73 E-value=1.7e-15 Score=103.49 Aligned_cols=125 Identities=22% Similarity=0.303 Sum_probs=110.3
Q ss_pred cceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE
Q psy11518 12 SHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 12 ~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 90 (139)
+....+-.++| ++..|.+.+.+|+|.-||+.+.+++..++...+.|.+++.+|.+..++.|+.||.+..++...++...
T Consensus 67 ~~drsIE~L~W~e~~RLFS~g~sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~ 146 (691)
T KOG2048|consen 67 PEDRSIESLAWAEGGRLFSSGLSGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITY 146 (691)
T ss_pred CCCCceeeEEEccCCeEEeecCCceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEE
Confidence 45567788888 78999999999999999999999999999999999999999999999999999988888888887766
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
........+++.+++|+|++..++.|+.||.|++||..++..+..+
T Consensus 147 ~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~ 192 (691)
T KOG2048|consen 147 KRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHII 192 (691)
T ss_pred EeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEe
Confidence 5544555556999999999999999999999999999999888743
No 109
>KOG0646|consensus
Probab=99.73 E-value=2e-16 Score=103.95 Aligned_cols=125 Identities=18% Similarity=0.285 Sum_probs=101.4
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEcc---------CCceeeEEEecCCCeEEEEECCC--CCEEEEecCCCc
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMV---------KRKQSGALMQHEGTITCLKFTPE--GSHLISCSDDGS 77 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~---------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~ 77 (139)
.+|...|+|+.| |+.++++|+.||.|.+|.+. +-++++.+..|.-+|+.+...+. ..++++++.|.+
T Consensus 120 ~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t 199 (476)
T KOG0646|consen 120 SAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRT 199 (476)
T ss_pred HhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCce
Confidence 468889999999 99999999999999999873 23678889999999999987764 457899999999
Q ss_pred EEEEEeCCceEEEEEE--------------------------------------------------------eCCCC-cc
Q psy11518 78 IAIFRVGSWQLEKLFK--------------------------------------------------------KAHKG-TA 100 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~--------------------------------------------------------~~~~~-~~ 100 (139)
+++||+..+.++..+. ..|.. .+
T Consensus 200 ~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ 279 (476)
T KOG0646|consen 200 IKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESA 279 (476)
T ss_pred EEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcc
Confidence 9999986544331110 12232 35
Q ss_pred eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
|+|++.+-||..|++|+.||.+.|||+.+.+.+..
T Consensus 280 ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRt 314 (476)
T KOG0646|consen 280 ITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRT 314 (476)
T ss_pred eeEEEEecCccEEEeeCCCCCEEEEecchHHHHHH
Confidence 99999999999999999999999999988776544
No 110
>KOG0641|consensus
Probab=99.73 E-value=6.5e-16 Score=94.18 Aligned_cols=117 Identities=18% Similarity=0.322 Sum_probs=103.1
Q ss_pred ecceeeEEEEe-cCCcEEEEeCCCCeEEEEEccCCceeeEEEe--c-----CCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 11 HSHTASVRSVA-ATSKLAASSGADETVVLYDMVKRKQSGALMQ--H-----EGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 11 ~~~~~~v~~~~-~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~--~-----~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
.+|.+.|.++- |++-++++|+.|.+|++||+....++.++.. | .+.|.+++..|.|++|++|-.|....+||
T Consensus 180 sghtghilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lyd 259 (350)
T KOG0641|consen 180 SGHTGHILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYD 259 (350)
T ss_pred cCCcccEEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEE
Confidence 47888888875 6999999999999999999998877766542 2 35689999999999999999999999999
Q ss_pred eCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
++.++.++.+ .+|... |.++.|+|.-.++++++.|..|++=|+..
T Consensus 260 irg~r~iq~f-~phsad-ir~vrfsp~a~yllt~syd~~ikltdlqg 304 (350)
T KOG0641|consen 260 IRGGRMIQRF-HPHSAD-IRCVRFSPGAHYLLTCSYDMKIKLTDLQG 304 (350)
T ss_pred eeCCceeeee-CCCccc-eeEEEeCCCceEEEEecccceEEEeeccc
Confidence 9999999998 677766 99999999999999999999999999863
No 111
>KOG0269|consensus
Probab=99.73 E-value=2.7e-17 Score=113.61 Aligned_cols=117 Identities=17% Similarity=0.317 Sum_probs=96.7
Q ss_pred ceeeEEEEec---CCcEEEEeCCCCeEEEEEccCC-ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 13 HTASVRSVAA---TSKLAASSGADETVVLYDMVKR-KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 13 ~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
....|.++.| .+..++++...|.+.+||++.. ++...+..|.++|.|+.|+|++.+||||++|++|++||....+.
T Consensus 175 nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~ 254 (839)
T KOG0269|consen 175 NSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRA 254 (839)
T ss_pred cchhhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCc
Confidence 3445556665 7889999999999999999764 56677889999999999999999999999999999999987776
Q ss_pred EEEEEeCCCCcceeEEEEccCCc-EEEEEc--CCCeEEEEEcCCC
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGK-LALSVG--KDKTLRTWNLVKG 130 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~d~~i~i~d~~~~ 130 (139)
.... ..+...++.++.|-|..+ .|++++ .|-.|+|||++..
T Consensus 255 ~~~~-tInTiapv~rVkWRP~~~~hLAtcsmv~dtsV~VWDvrRP 298 (839)
T KOG0269|consen 255 KPKH-TINTIAPVGRVKWRPARSYHLATCSMVVDTSVHVWDVRRP 298 (839)
T ss_pred ccee-EEeecceeeeeeeccCccchhhhhhccccceEEEEeeccc
Confidence 6555 455666799999999776 455555 4888999999764
No 112
>KOG2394|consensus
Probab=99.73 E-value=7.3e-17 Score=107.94 Aligned_cols=120 Identities=24% Similarity=0.371 Sum_probs=96.6
Q ss_pred eeeEEEEec---CCcEEEEeCCCCeEEEEEccCC----------------------------ceeeEEEecCCCeEEEEE
Q psy11518 14 TASVRSVAA---TSKLAASSGADETVVLYDMVKR----------------------------KQSGALMQHEGTITCLKF 62 (139)
Q Consensus 14 ~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~----------------------------~~~~~~~~~~~~v~~~~~ 62 (139)
...++|+.| +...++++-.+|.+.+||..-. .++.....-.+.|...+|
T Consensus 219 ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~~~t~p~~~~~k~~~~f~i~t~ksk~~rNPv~~w~~~~g~in~f~F 298 (636)
T KOG2394|consen 219 KSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVCGATAPSYQALKDGDQFAILTSKSKKTRNPVARWHIGEGSINEFAF 298 (636)
T ss_pred ccceEEEEEEeCCCceEEEEEecCceEEeeccccccCCCCcccccCCCCeeEEeeeeccccCCccceeEeccccccceeE
Confidence 367888888 7778888888999999975310 111111223457888999
Q ss_pred CCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 63 TPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 63 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
+|||++||+.+.||.+++||..+.+++..+ ....++ ..|++|+|||++|++|++|..|.||.+..++.+..
T Consensus 299 S~DG~~LA~VSqDGfLRvF~fdt~eLlg~m-kSYFGG-LLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVAR 369 (636)
T KOG2394|consen 299 SPDGKYLATVSQDGFLRIFDFDTQELLGVM-KSYFGG-LLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVAR 369 (636)
T ss_pred cCCCceEEEEecCceEEEeeccHHHHHHHH-Hhhccc-eEEEEEcCCccEEEecCCcceEEEEEeccceEEEe
Confidence 999999999999999999999988887766 455566 99999999999999999999999999999887754
No 113
>KOG0308|consensus
Probab=99.72 E-value=3.8e-16 Score=106.46 Aligned_cols=117 Identities=25% Similarity=0.338 Sum_probs=107.6
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
|+..++.+++- .+..+++|+..+-+++||..+.+.+..+.+|+..|.++..+++|+.+++++.||+|++||+...+++
T Consensus 169 G~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl 248 (735)
T KOG0308|consen 169 GPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCL 248 (735)
T ss_pred CCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeecccccee
Confidence 66777787776 5668999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
..+ ..|... ++++..+|+=..+++|+.||.|..=|+++.
T Consensus 249 ~T~-~vH~e~-VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 249 ATY-IVHKEG-VWALQSSPSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred eeE-EeccCc-eEEEeeCCCcceEEecCCCCcEEecccCCc
Confidence 998 667777 999999999999999999999999999884
No 114
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.72 E-value=1.5e-15 Score=93.03 Aligned_cols=116 Identities=18% Similarity=0.353 Sum_probs=88.8
Q ss_pred eeEEEEec--CCcEEEE--eCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC---CCcEEEEEeCCce
Q psy11518 15 ASVRSVAA--TSKLAAS--SGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD---DGSIAIFRVGSWQ 87 (139)
Q Consensus 15 ~~v~~~~~--~~~~l~~--~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~ 87 (139)
++|.+++| +++.+++ |..+..|.+||++ ++.+..+. ...+..+.|+|+|+++++++. .|.|.+||.++.+
T Consensus 60 ~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~ 136 (194)
T PF08662_consen 60 GPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKK 136 (194)
T ss_pred CceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCE
Confidence 45777776 7777544 4466799999986 66666664 456789999999999998864 4669999999877
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcC------CCeEEEEEcCCCceeEEEec
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~ 138 (139)
.+... . +.. +..++|+|+|++++++.. |+.++||+. +|+.+....+
T Consensus 137 ~i~~~--~-~~~-~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~-~G~~l~~~~~ 188 (194)
T PF08662_consen 137 KISTF--E-HSD-ATDVEWSPDGRYLATATTSPRLRVDNGFKIWSF-QGRLLYKKPF 188 (194)
T ss_pred Eeecc--c-cCc-EEEEEEcCCCCEEEEEEeccceeccccEEEEEe-cCeEeEecch
Confidence 77665 2 223 789999999999998863 788999998 5777766543
No 115
>KOG0293|consensus
Probab=99.72 E-value=1.1e-16 Score=104.24 Aligned_cols=125 Identities=20% Similarity=0.308 Sum_probs=101.5
Q ss_pred eeeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE-ecCCCeEEEEECCCCCEEEEecCCCcE
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSHLISCSDDGSI 78 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i 78 (139)
+++.+++. +|..+|..+.| |.+++++++.+..+.+||+.++.....+. ++...+.+++|.|||..+++|+.|+.+
T Consensus 259 ~kl~~tlv--gh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i 336 (519)
T KOG0293|consen 259 FKLKKTLV--GHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTI 336 (519)
T ss_pred eeeeeeee--cccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcE
Confidence 45556665 56666666655 99999999999999999999998877765 346788999999999999999999999
Q ss_pred EEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
..||++... .... ...+.+.|.+++..+||+++++.+.|..|++|+.++.
T Consensus 337 ~~wdlDgn~-~~~W-~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~ 386 (519)
T KOG0293|consen 337 IMWDLDGNI-LGNW-EGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREAR 386 (519)
T ss_pred EEecCCcch-hhcc-cccccceeEEEEEcCCCcEEEEEecccceeeechhhh
Confidence 999987544 3333 2233345999999999999999999999999998754
No 116
>KOG0288|consensus
Probab=99.72 E-value=6.2e-16 Score=100.56 Aligned_cols=122 Identities=15% Similarity=0.309 Sum_probs=102.1
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeC
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA 95 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 95 (139)
.+.++......+++|..|+.|++||..+..+......+. .|+++..++++..+.+++.|..+.+.|+++......+.-.
T Consensus 304 ~cnDI~~~~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~ 382 (459)
T KOG0288|consen 304 QCNDIVCSISDVISGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAE 382 (459)
T ss_pred cccceEecceeeeecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecc
Confidence 344444456678889999999999999999999888765 8999999999999999999999999999998877666322
Q ss_pred C--CCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 96 H--KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 96 ~--~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
. .....+.+.|+|++.++++|+.||.|+||++.+++.....+.
T Consensus 383 g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~ 427 (459)
T KOG0288|consen 383 GFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSL 427 (459)
T ss_pred ccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEEecc
Confidence 1 122378899999999999999999999999999998877653
No 117
>KOG0278|consensus
Probab=99.72 E-value=4.5e-17 Score=100.20 Aligned_cols=131 Identities=19% Similarity=0.289 Sum_probs=99.2
Q ss_pred EEEeecceeeEEEEec-----CCcEEEEeCCCCeEEEEEccCCceeeEEEecCC--------------------------
Q psy11518 7 TFVTHSHTASVRSVAA-----TSKLAASSGADETVVLYDMVKRKQSGALMQHEG-------------------------- 55 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~-----~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~-------------------------- 55 (139)
.+..++|..+|..+.| +|-+|++++.|+.-++-+=+++.=+.+|.+|.+
T Consensus 7 pl~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw 86 (334)
T KOG0278|consen 7 PLTCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVW 86 (334)
T ss_pred ceEEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhh
Confidence 4567788888888876 777888888888877777666666665555544
Q ss_pred ---------------CeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCC
Q psy11518 56 ---------------TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120 (139)
Q Consensus 56 ---------------~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 120 (139)
-|..++|+.+.++|++|+.+..+++||++..+....-...|.++ |..+.|....+.++++++|+
T Consensus 87 ~a~tgdelhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg~-Ir~v~wc~eD~~iLSSadd~ 165 (334)
T KOG0278|consen 87 DAVTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTGG-IRTVLWCHEDKCILSSADDK 165 (334)
T ss_pred hhhhhhhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCCc-ceeEEEeccCceEEeeccCC
Confidence 45667777777777777777777777776655433332455655 99999999999999999999
Q ss_pred eEEEEEcCCCceeEEEec
Q psy11518 121 TLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 121 ~i~i~d~~~~~~~~~~~~ 138 (139)
.||+||.++++.++++.+
T Consensus 166 tVRLWD~rTgt~v~sL~~ 183 (334)
T KOG0278|consen 166 TVRLWDHRTGTEVQSLEF 183 (334)
T ss_pred ceEEEEeccCcEEEEEec
Confidence 999999999999998875
No 118
>KOG1332|consensus
Probab=99.71 E-value=2.6e-16 Score=96.43 Aligned_cols=124 Identities=23% Similarity=0.315 Sum_probs=101.9
Q ss_pred EEEeecceeeEEEEec----CCcEEEEeCCCCeEEEEEccCC--ceeeEEEecCCCeEEEEECCC--CCEEEEecCCCcE
Q psy11518 7 TFVTHSHTASVRSVAA----TSKLAASSGADETVVLYDMVKR--KQSGALMQHEGTITCLKFTPE--GSHLISCSDDGSI 78 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~----~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i 78 (139)
.....||.+++..+.| -|.+|++++.||.|.||.-..+ ...+....|...|++++|.|. |-.|++++.||.|
T Consensus 49 l~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~v 128 (299)
T KOG1332|consen 49 LAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKV 128 (299)
T ss_pred eeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcE
Confidence 3455689999999987 6899999999999999998777 345566789999999999995 5678999999999
Q ss_pred EEEEeCCc--eEEEEEEeCCCCcceeEEEEccC---C-----------cEEEEEcCCCeEEEEEcCCCc
Q psy11518 79 AIFRVGSW--QLEKLFKKAHKGTAVNHISIHPS---G-----------KLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 79 ~~~d~~~~--~~~~~~~~~~~~~~v~~~~~~~~---~-----------~~l~~~~~d~~i~i~d~~~~~ 131 (139)
.+++.++. -....+...|..+ +++++|.|. | +.|++|+.|..|.||+..+++
T Consensus 129 svl~~~~~g~w~t~ki~~aH~~G-vnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~ 196 (299)
T KOG1332|consen 129 SVLTYDSSGGWTTSKIVFAHEIG-VNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDS 196 (299)
T ss_pred EEEEEcCCCCccchhhhhccccc-cceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcc
Confidence 99998764 2333444677777 999999995 4 569999999999999998864
No 119
>KOG1539|consensus
Probab=99.71 E-value=7.2e-16 Score=107.49 Aligned_cols=115 Identities=26% Similarity=0.416 Sum_probs=95.5
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceee----------------------------------------
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG---------------------------------------- 48 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~---------------------------------------- 48 (139)
..|..+|..++. -++.+++++.+|.+++||+.+...+.
T Consensus 490 ~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvv 569 (910)
T KOG1539|consen 490 PAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVV 569 (910)
T ss_pred ccccCceeEEEecCCCceEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhh
Confidence 357778888887 45679999999999999987543221
Q ss_pred -EEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC-CeEEEEE
Q psy11518 49 -ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-KTLRTWN 126 (139)
Q Consensus 49 -~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~i~d 126 (139)
.|.+|...|+.++|||+|+++++++.|++|++||+.++.++..+. ...++..+.|+|+|.+|++...| .-|.+|.
T Consensus 570 R~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~---vd~~~~sls~SPngD~LAT~Hvd~~gIylWs 646 (910)
T KOG1539|consen 570 REFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLL---VDSPCTSLSFSPNGDFLATVHVDQNGIYLWS 646 (910)
T ss_pred HHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEe---cCCcceeeEECCCCCEEEEEEecCceEEEEE
Confidence 335799999999999999999999999999999999999998883 33348899999999999999987 6699996
Q ss_pred cC
Q psy11518 127 LV 128 (139)
Q Consensus 127 ~~ 128 (139)
-.
T Consensus 647 Nk 648 (910)
T KOG1539|consen 647 NK 648 (910)
T ss_pred ch
Confidence 43
No 120
>KOG1009|consensus
Probab=99.71 E-value=1.4e-15 Score=98.72 Aligned_cols=120 Identities=22% Similarity=0.512 Sum_probs=95.2
Q ss_pred eeEEEEec---CCcEEEEeCCCCeEEEEEccCCc---------eeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 15 ASVRSVAA---TSKLAASSGADETVVLYDMVKRK---------QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 15 ~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
.++..+.+ ..+.+++|+.|..|++|-+..+. .+..+..|+..|+++.|+|+|..||+|+.+|.+.+|.
T Consensus 14 ~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk 93 (434)
T KOG1009|consen 14 EPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWK 93 (434)
T ss_pred CceEEEEeccCcccceecccCccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCceEEEEE
Confidence 45566665 33489999999999999986532 2345668999999999999999999999999999998
Q ss_pred eC--------C--------ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 83 VG--------S--------WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 83 ~~--------~--------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.. + +.....+ ..|... +..++|+|++.++++++.|..+++||+..|+.+...
T Consensus 94 ~~~~~~~~~d~e~~~~ke~w~v~k~l-r~h~~d-iydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~ 161 (434)
T KOG1009|consen 94 QGDVRIFDADTEADLNKEKWVVKKVL-RGHRDD-IYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAIL 161 (434)
T ss_pred ecCcCCccccchhhhCccceEEEEEe-cccccc-hhhhhccCCCceeeeeeccceEEEEEeccceeEeec
Confidence 75 2 1112222 334444 999999999999999999999999999999887654
No 121
>KOG4283|consensus
Probab=99.71 E-value=7.1e-16 Score=96.99 Aligned_cols=117 Identities=16% Similarity=0.286 Sum_probs=99.6
Q ss_pred ecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCC---CCEEEEecCCCcEEEEEeC
Q psy11518 11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE---GSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 11 ~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~ 84 (139)
.+|...|....| |..++.+++-|.++++||..+.+....|+ .++.|.+-+|+|- ..++|+|..+-+|++-|+.
T Consensus 98 ~~Hky~iss~~WyP~DtGmFtssSFDhtlKVWDtnTlQ~a~~F~-me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~ 176 (397)
T KOG4283|consen 98 NGHKYAISSAIWYPIDTGMFTSSSFDHTLKVWDTNTLQEAVDFK-MEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIA 176 (397)
T ss_pred ccceeeeeeeEEeeecCceeecccccceEEEeecccceeeEEee-cCceeehhhcChhhhcceEEEEecCCCcEEEEecc
Confidence 356777777776 88899999999999999999998887776 4567888889883 4567889999999999999
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCCcE-EEEEcCCCeEEEEEcCCC
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSGKL-ALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~ 130 (139)
.|.....+ ..|++. |.++.|+|...+ |++|+.||.|++||++..
T Consensus 177 SGs~sH~L-sGHr~~-vlaV~Wsp~~e~vLatgsaDg~irlWDiRra 221 (397)
T KOG4283|consen 177 SGSFSHTL-SGHRDG-VLAVEWSPSSEWVLATGSADGAIRLWDIRRA 221 (397)
T ss_pred CCcceeee-ccccCc-eEEEEeccCceeEEEecCCCceEEEEEeecc
Confidence 99998888 678877 999999998875 578889999999999864
No 122
>KOG0267|consensus
Probab=99.71 E-value=2.6e-17 Score=113.17 Aligned_cols=121 Identities=26% Similarity=0.442 Sum_probs=108.1
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
+|...+..+.| -+.+.+.|+.|+.+++||.+...+.+.+.+|...+.++.|+|+|++++.++.|..+++||...++..
T Consensus 110 gh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~ 189 (825)
T KOG0267|consen 110 GHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLS 189 (825)
T ss_pred ccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccc
Confidence 66667777666 7888999999999999999988899999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
..| ..|.+. +..+.|+|..-++..|+.|+.+++||+++-+.+.
T Consensus 190 ~ef-~~~e~~-v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~ 232 (825)
T KOG0267|consen 190 KEF-KSHEGK-VQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVIS 232 (825)
T ss_pred ccc-cccccc-ccccccCchhhhhccCCCCceeeeeccceeEEee
Confidence 888 455555 8999999999999999999999999999765554
No 123
>KOG0300|consensus
Probab=99.70 E-value=1.2e-16 Score=101.40 Aligned_cols=131 Identities=21% Similarity=0.355 Sum_probs=106.9
Q ss_pred eeeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEE
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIA 79 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 79 (139)
+++++.+. ||...|..++. ..+.+.+++.|.+-+||.+++++++..+.+|.+.|+++.|++.+.++++++.|+..+
T Consensus 138 ~~lvre~~--GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taH 215 (481)
T KOG0300|consen 138 FRLVRELE--GHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAH 215 (481)
T ss_pred Eeehhhhc--ccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchH
Confidence 44555554 78888888886 556888999999999999999999999999999999999999999999999999999
Q ss_pred EEEe------CC------------------------------c----eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC
Q psy11518 80 IFRV------GS------------------------------W----QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD 119 (139)
Q Consensus 80 ~~d~------~~------------------------------~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 119 (139)
+|.. .. + .++-.+ ..|.. .|.+..|-..|+.+++++.|
T Consensus 216 IW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~l-tgH~~-vV~a~dWL~gg~Q~vTaSWD 293 (481)
T KOG0300|consen 216 IWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRL-TGHRA-VVSACDWLAGGQQMVTASWD 293 (481)
T ss_pred HHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeee-ecccc-ceEehhhhcCcceeeeeecc
Confidence 9962 10 0 011122 23333 38888899999999999999
Q ss_pred CeEEEEEcCCCceeEEE
Q psy11518 120 KTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 120 ~~i~i~d~~~~~~~~~~ 136 (139)
++..+||++++..+..+
T Consensus 294 RTAnlwDVEtge~v~~L 310 (481)
T KOG0300|consen 294 RTANLWDVETGEVVNIL 310 (481)
T ss_pred ccceeeeeccCceeccc
Confidence 99999999999988764
No 124
>KOG1063|consensus
Probab=99.70 E-value=1.8e-16 Score=108.57 Aligned_cols=127 Identities=23% Similarity=0.306 Sum_probs=103.1
Q ss_pred eeEEEEEeecceeeEEEEecCCcEEEEeCCC-----CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCc
Q psy11518 3 TLTQTFVTHSHTASVRSVAATSKLAASSGAD-----ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS 77 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 77 (139)
+.++++-.++......+++++++++|+++.. ..|++|+..+-...+.+.+|.-.|+.++|+|++++|++.++|++
T Consensus 516 PEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt 595 (764)
T KOG1063|consen 516 PEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRT 595 (764)
T ss_pred hhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCce
Confidence 3345555566666666777789999999854 36899999988888899999999999999999999999999999
Q ss_pred EEEEEeCCceEE---EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 78 IAIFRVGSWQLE---KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 78 i~~~d~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
+.+|........ ......|..- |.+.+|+|++.++++++.|..|.+|.....
T Consensus 596 ~sl~~~~~~~~~e~~fa~~k~HtRI-IWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 596 VSLYEVQEDIKDEFRFACLKAHTRI-IWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred EEeeeeecccchhhhhccccccceE-EEEcccCcccceeEEecCCceEEEEeccCc
Confidence 999998554321 1112345544 999999999999999999999999998876
No 125
>KOG0299|consensus
Probab=99.70 E-value=1.5e-16 Score=104.41 Aligned_cols=124 Identities=19% Similarity=0.358 Sum_probs=93.3
Q ss_pred cceeeEEEE--ecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSV--AATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~--~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
+|...+.++ ++|+++|++|+.|..|.||+..+.+.+..+++|.+.|.+++|-.....+.+++.|+.+++|+++....+
T Consensus 200 ~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~v 279 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYV 279 (479)
T ss_pred cccceeEEEEEcCCCcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHH
Confidence 455555554 459999999999999999999999999999999999999999988889999999999999998654333
Q ss_pred EEEEeCCCCcceeEE-----------------------------EEcc-----------CCcEEEEEcCCCeEEEEEcCC
Q psy11518 90 KLFKKAHKGTAVNHI-----------------------------SIHP-----------SGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~-----------------------------~~~~-----------~~~~l~~~~~d~~i~i~d~~~ 129 (139)
..+ ..|... |.++ -|.+ +...+++|+++|.|.+|++.+
T Consensus 280 etl-yGHqd~-v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~K 357 (479)
T KOG0299|consen 280 ETL-YGHQDG-VLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLK 357 (479)
T ss_pred HHH-hCCccc-eeeechhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeecc
Confidence 222 222221 2222 2222 445677788888888888888
Q ss_pred CceeEEEe
Q psy11518 130 GRSAYITN 137 (139)
Q Consensus 130 ~~~~~~~~ 137 (139)
.++++...
T Consensus 358 Kkplf~~~ 365 (479)
T KOG0299|consen 358 KKPLFTSR 365 (479)
T ss_pred cCceeEee
Confidence 88777654
No 126
>KOG0303|consensus
Probab=99.70 E-value=6.1e-16 Score=100.32 Aligned_cols=118 Identities=19% Similarity=0.242 Sum_probs=101.5
Q ss_pred cceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 12 SHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 12 ~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
+|...|.-+.| ..+.|++++.|..|.+|++.+++.+.++. |...|.+++|+.+|.++++.++|..|++||.++++.
T Consensus 129 gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~ 207 (472)
T KOG0303|consen 129 GHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTV 207 (472)
T ss_pred ecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcE
Confidence 55555555555 67789999999999999999999998887 999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEc---CCCeEEEEEcCCCc
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVG---KDKTLRTWNLVKGR 131 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~ 131 (139)
...- ..|.+......-|-.++.++.+|. .++++.+||..+-+
T Consensus 208 v~e~-~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~ 252 (472)
T KOG0303|consen 208 VSEG-VAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLE 252 (472)
T ss_pred eeec-ccccCCCcceeEEeccCceeeeccccccccceeccCccccc
Confidence 8887 788888788888999999555554 47899999877643
No 127
>KOG0973|consensus
Probab=99.69 E-value=1.8e-15 Score=107.56 Aligned_cols=131 Identities=22% Similarity=0.437 Sum_probs=104.4
Q ss_pred eeeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEE
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIA 79 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 79 (139)
|+....+. +|...|.++.| ++.++++++.|++|.+|+..+.+.+..+.+|.+.|-.+.|+|-|++||+-+.|+.|+
T Consensus 119 wk~~~~l~--~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtik 196 (942)
T KOG0973|consen 119 WKVVSILR--GHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLK 196 (942)
T ss_pred eeEEEEEe--cCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEE
Confidence 45555555 68888888887 799999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCceEEEEE--------------------------------------------------E-eCCCCcceeEEEEcc
Q psy11518 80 IFRVGSWQLEKLF--------------------------------------------------K-KAHKGTAVNHISIHP 108 (139)
Q Consensus 80 ~~d~~~~~~~~~~--------------------------------------------------~-~~~~~~~v~~~~~~~ 108 (139)
+|++.++.....+ . ..|.. ++.++.|+|
T Consensus 197 vwrt~dw~i~k~It~pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~-p~evvrFnP 275 (942)
T KOG0973|consen 197 VWRTSDWGIEKSITKPFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSA-PVEVVRFNP 275 (942)
T ss_pred EEEcccceeeEeeccchhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCC-ceEEEEeCh
Confidence 9996442211111 0 23343 488899987
Q ss_pred -----CCc------------EEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 109 -----SGK------------LALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 109 -----~~~------------~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
+.+ .+++|+.|+.|.||.....+++..
T Consensus 276 ~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~v 319 (942)
T KOG0973|consen 276 KLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFV 319 (942)
T ss_pred HHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhh
Confidence 111 567888999999999877777654
No 128
>KOG0288|consensus
Probab=99.69 E-value=2.2e-15 Score=98.02 Aligned_cols=110 Identities=26% Similarity=0.386 Sum_probs=95.1
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEec----CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEE
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQH----EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 91 (139)
.-..+.+++..+.+.+.|.++.+.|..+......+... ....+.+.|||++.|+++|+.||.|++|++.++++...
T Consensus 345 tSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~ 424 (459)
T KOG0288|consen 345 TSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKV 424 (459)
T ss_pred eeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEEEEEccCceEEEE
Confidence 33444569999999999999999999998887776531 23368899999999999999999999999999999999
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEE
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 125 (139)
+...+....|++++|+|.|..+++++.++.+.+|
T Consensus 425 l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 425 LSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred eccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 8766666469999999999999999999999998
No 129
>KOG1036|consensus
Probab=99.69 E-value=2.2e-15 Score=94.78 Aligned_cols=117 Identities=19% Similarity=0.286 Sum_probs=96.0
Q ss_pred cceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE
Q psy11518 12 SHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 12 ~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 90 (139)
.|..++++++| +...+++|+.||.|+.+|+.++... .+-.|...+.|+.+++....+++|+.|+.|++||.++.....
T Consensus 52 ~~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~-~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~ 130 (323)
T KOG1036|consen 52 KHGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNED-QIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVG 130 (323)
T ss_pred ecCCceeeeeccCCceEEEeccCceEEEEEecCCcce-eeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccccc
Confidence 36778999999 8889999999999999999887644 344689999999999988899999999999999998755544
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
.+.... .|.++... +..|++|+.|+.+.+||+++.....
T Consensus 131 ~~d~~k---kVy~~~v~--g~~LvVg~~~r~v~iyDLRn~~~~~ 169 (323)
T KOG1036|consen 131 TFDQGK---KVYCMDVS--GNRLVVGTSDRKVLIYDLRNLDEPF 169 (323)
T ss_pred ccccCc---eEEEEecc--CCEEEEeecCceEEEEEcccccchh
Confidence 442222 48887764 7889999999999999999865543
No 130
>KOG2445|consensus
Probab=99.68 E-value=1.3e-14 Score=91.65 Aligned_cols=120 Identities=18% Similarity=0.330 Sum_probs=94.1
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCC----ceeeEEEecCCCeEEEEECC--CCCEEEEecCCCcEEEEEe
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKR----KQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~ 83 (139)
+|..-+.|+.| .|+.+++++.|++++|||.... .+....+.|.+.|..+.|.+ -|+.+|+++.|+.+.+|.-
T Consensus 11 ~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWEE 90 (361)
T KOG2445|consen 11 GHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWEE 90 (361)
T ss_pred CCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeeee
Confidence 67777888887 7999999999999999997544 44556678999999999975 4899999999999999986
Q ss_pred CC---------ceEEEEEEeCCCCcceeEEEEcc--CCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 84 GS---------WQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 84 ~~---------~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
.. +.....+ ...+. .|+++.|.| -|-.+++++.||.+|||+..+...+
T Consensus 91 ~~~~~~~~~~~Wv~~ttl-~Dsrs-sV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nL 149 (361)
T KOG2445|consen 91 QEKSEEAHGRRWVRRTTL-VDSRS-SVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNL 149 (361)
T ss_pred cccccccccceeEEEEEe-ecCCc-ceeEEEecchhcceEEEEeccCcEEEEEecCCcccc
Confidence 21 2223333 23333 499999999 5668999999999999987654433
No 131
>KOG0649|consensus
Probab=99.68 E-value=6.8e-15 Score=90.46 Aligned_cols=121 Identities=10% Similarity=0.153 Sum_probs=94.2
Q ss_pred EEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCC
Q psy11518 17 VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH 96 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 96 (139)
.+.+.|..+.++.++.|+.+.-||+++++...++++|...+.++.-......+++|+.||.+++||+++++....++...
T Consensus 119 am~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk 198 (325)
T KOG0649|consen 119 AMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYK 198 (325)
T ss_pred eeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEecccc
Confidence 44455656666667789999999999999999999999999999886666678999999999999999999888774332
Q ss_pred CCcc------eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 97 KGTA------VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 97 ~~~~------v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+... -+-.+..-+..++++|+. ..+.+|+++..++...+.+
T Consensus 199 ~~~~lRp~~g~wigala~~edWlvCGgG-p~lslwhLrsse~t~vfpi 245 (325)
T KOG0649|consen 199 NPNLLRPDWGKWIGALAVNEDWLVCGGG-PKLSLWHLRSSESTCVFPI 245 (325)
T ss_pred ChhhcCcccCceeEEEeccCceEEecCC-CceeEEeccCCCceEEEec
Confidence 2210 111444456778888775 5699999999998887764
No 132
>KOG2096|consensus
Probab=99.68 E-value=7.2e-16 Score=97.82 Aligned_cols=123 Identities=20% Similarity=0.303 Sum_probs=93.5
Q ss_pred eeeEEEEEeecceeeEEEEecCCcEEEEeCCCCeEEEEEcc---CC-----ceeeEEEecCCCeEEEEECCCCCEEEEec
Q psy11518 2 YTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMV---KR-----KQSGALMQHEGTITCLKFTPEGSHLISCS 73 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~---~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 73 (139)
.++++.+........-.+++|+|+++++++-..-|++|++- .| ..+..+++|.+.|...+|+++.+.+++.+
T Consensus 218 Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvS 297 (420)
T KOG2096|consen 218 GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVS 297 (420)
T ss_pred CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEe
Confidence 45566666666666777889999999999999999999962 22 34567889999999999999999999999
Q ss_pred CCCcEEEEEeCC-------------c---------eE-------------------EEE-----------EEeCCCCcce
Q psy11518 74 DDGSIAIFRVGS-------------W---------QL-------------------EKL-----------FKKAHKGTAV 101 (139)
Q Consensus 74 ~d~~i~~~d~~~-------------~---------~~-------------------~~~-----------~~~~~~~~~v 101 (139)
.||.+++||.+- + .+ +.. ++..|... |
T Consensus 298 kDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~~e~~h~~~-I 376 (420)
T KOG2096|consen 298 KDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGDSLAVSFGSDLKVFASEDGKDYPELEDIHSTT-I 376 (420)
T ss_pred cCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCcEEEeecCCceEEEEcccCccchhHHHhhcCc-e
Confidence 999999999731 0 00 001 11122333 8
Q ss_pred eEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 102 NHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 102 ~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
.+++|+++|++++++++ +.++++.
T Consensus 377 s~is~~~~g~~~atcGd-r~vrv~~ 400 (420)
T KOG2096|consen 377 SSISYSSDGKYIATCGD-RYVRVIR 400 (420)
T ss_pred eeEEecCCCcEEeeecc-eeeeeec
Confidence 99999999999999884 5677764
No 133
>KOG0301|consensus
Probab=99.68 E-value=4e-15 Score=102.07 Aligned_cols=114 Identities=17% Similarity=0.282 Sum_probs=98.0
Q ss_pred ecceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 11 HSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 11 ~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
.+|...|..+.. ++..+++++.||.|+.|++ +++.+.+..+|++.+.+++...++..+++++.|+++++|+.. ++.
T Consensus 176 ~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~ 252 (745)
T KOG0301|consen 176 SGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKD--ECV 252 (745)
T ss_pred ccchhheeeeEEecCCCeEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEecCCceEEEeecC--ceE
Confidence 368999999988 8889999999999999998 899999999999999999988888999999999999999976 566
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
..+. +....++++.+-++|. +++|+.||.|+||..+..
T Consensus 253 q~I~--lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~k~ 290 (745)
T KOG0301|consen 253 QVIT--LPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVDKD 290 (745)
T ss_pred EEEe--cCccceEEEEEeeCCC-EEEeccCceEEEEEeccc
Confidence 6653 3333489999888887 678888999999987643
No 134
>KOG0299|consensus
Probab=99.68 E-value=8.6e-16 Score=100.93 Aligned_cols=76 Identities=14% Similarity=0.217 Sum_probs=68.4
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
+.+|...|.++.| ....+++++.|+.|++|+++....+.++.+|+..|..+.-....+.+.+|+.|+++++|++..
T Consensus 240 ~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~e 317 (479)
T KOG0299|consen 240 FKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPE 317 (479)
T ss_pred ccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccceEEeccccceeEEEeccc
Confidence 4589999999999 666799999999999999999999999999999999998888888888888999999999943
No 135
>KOG0294|consensus
Probab=99.66 E-value=2e-15 Score=95.42 Aligned_cols=113 Identities=18% Similarity=0.306 Sum_probs=86.3
Q ss_pred cceeeEEEEecC----CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 12 SHTASVRSVAAT----SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 12 ~~~~~v~~~~~~----~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
.|.+.++++.|. ...|++|+.||.|.+|+...-..+..+++|.+.|+.++.+|.+++.++.+.|+.++.||+-.++
T Consensus 81 ~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr 160 (362)
T KOG0294|consen 81 SHAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGR 160 (362)
T ss_pred ccccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCc
Confidence 478889999982 2379999999999999999999999999999999999999999999999999999999997776
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
.-......+. ...+.|+|.|.+++.++.+ .|-+|.+.
T Consensus 161 ~a~v~~L~~~---at~v~w~~~Gd~F~v~~~~-~i~i~q~d 197 (362)
T KOG0294|consen 161 VAFVLNLKNK---ATLVSWSPQGDHFVVSGRN-KIDIYQLD 197 (362)
T ss_pred cceeeccCCc---ceeeEEcCCCCEEEEEecc-EEEEEecc
Confidence 5555533333 2235556555544444432 34444444
No 136
>KOG2394|consensus
Probab=99.66 E-value=1.1e-15 Score=102.40 Aligned_cols=90 Identities=17% Similarity=0.342 Sum_probs=78.3
Q ss_pred eEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.+..++| ||++||+.+.||.++|||+.+.+.+..++..-+...|++|+|||+++++|+.|..|.+|.+...+.+..-
T Consensus 292 ~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARG- 370 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARG- 370 (636)
T ss_pred cccceeEcCCCceEEEEecCceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEec-
Confidence 5555555 9999999999999999999998888887777788999999999999999999999999999988877665
Q ss_pred eCCCCcceeEEEEc
Q psy11518 94 KAHKGTAVNHISIH 107 (139)
Q Consensus 94 ~~~~~~~v~~~~~~ 107 (139)
..|+.. |..++|.
T Consensus 371 qGHkSW-Vs~VaFD 383 (636)
T KOG2394|consen 371 QGHKSW-VSVVAFD 383 (636)
T ss_pred cccccc-eeeEeec
Confidence 566666 8888887
No 137
>KOG0301|consensus
Probab=99.66 E-value=4.8e-15 Score=101.72 Aligned_cols=113 Identities=30% Similarity=0.453 Sum_probs=95.4
Q ss_pred eecceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 10 THSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 10 ~~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
..+|...|.++.. ..+.+++|+.|.+|++|. .++.+.+|.+|..-|..+++-+++ .+++++.||.|+.|++ +++.
T Consensus 136 l~gH~asVWAv~~l~e~~~vTgsaDKtIklWk--~~~~l~tf~gHtD~VRgL~vl~~~-~flScsNDg~Ir~w~~-~ge~ 211 (745)
T KOG0301|consen 136 LQGHTASVWAVASLPENTYVTGSADKTIKLWK--GGTLLKTFSGHTDCVRGLAVLDDS-HFLSCSNDGSIRLWDL-DGEV 211 (745)
T ss_pred cCCcchheeeeeecCCCcEEeccCcceeeecc--CCchhhhhccchhheeeeEEecCC-CeEeecCCceEEEEec-cCce
Confidence 5678888888775 455889999999999997 477889999999999999988764 5778899999999999 5666
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
+..+ ..|... +++++...++..++++++|++++||+-.
T Consensus 212 l~~~-~ghtn~-vYsis~~~~~~~Ivs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 212 LLEM-HGHTNF-VYSISMALSDGLIVSTGEDRTLRIWKKD 249 (745)
T ss_pred eeee-eccceE-EEEEEecCCCCeEEEecCCceEEEeecC
Confidence 6666 566666 9999988889999999999999999986
No 138
>KOG0268|consensus
Probab=99.66 E-value=6.9e-16 Score=99.11 Aligned_cols=118 Identities=24% Similarity=0.363 Sum_probs=94.3
Q ss_pred eeEEEEec---CCcEEEEeCCCCeEEEEEccCCceee------------------------------------------E
Q psy11518 15 ASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSG------------------------------------------A 49 (139)
Q Consensus 15 ~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~------------------------------------------~ 49 (139)
..+.++.| ....|++++.|+.|.+||+..+.++. .
T Consensus 188 Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v 267 (433)
T KOG0268|consen 188 DSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNV 267 (433)
T ss_pred CceeEEecCCCcchheeeeccCCceEEEecccCCccceeeeeccccceecCccccceeeccccccceehhhhhhcccchh
Confidence 34555555 56678888899999999987765543 2
Q ss_pred EEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 50 LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 50 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
..+|.+.|..+.|+|.|+-+++|+.|..|++|..+.+.....+....-.. |.++.|+.|.+++++|++|+.|++|....
T Consensus 268 ~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~-V~~Vk~S~Dskyi~SGSdd~nvRlWka~A 346 (433)
T KOG0268|consen 268 HKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQH-VFCVKYSMDSKYIISGSDDGNVRLWKAKA 346 (433)
T ss_pred hcccceeEEEeccCCCcchhccccccceEEEeecCCCcchhhhhHhhhhe-eeEEEEeccccEEEecCCCcceeeeecch
Confidence 24678889999999999999999999999999998887776663333333 99999999999999999999999998765
Q ss_pred Ccee
Q psy11518 130 GRSA 133 (139)
Q Consensus 130 ~~~~ 133 (139)
.+.+
T Consensus 347 sekl 350 (433)
T KOG0268|consen 347 SEKL 350 (433)
T ss_pred hhhc
Confidence 5443
No 139
>KOG2110|consensus
Probab=99.65 E-value=3e-14 Score=91.72 Aligned_cols=122 Identities=18% Similarity=0.288 Sum_probs=99.8
Q ss_pred ceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEe---cCCCeEEEEECCCCCEEEEe--cCCCcEEEEEeCCce
Q psy11518 13 HTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQ---HEGTITCLKFTPEGSHLISC--SDDGSIAIFRVGSWQ 87 (139)
Q Consensus 13 ~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~--~~d~~i~~~d~~~~~ 87 (139)
.+.+|.++..+.+.|++.-++. |.|||+++.+.+.++.. +...+.++++++++.++|-- ...|.|.+||..+-+
T Consensus 86 fpt~IL~VrmNr~RLvV~Lee~-IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~ 164 (391)
T KOG2110|consen 86 FPTSILAVRMNRKRLVVCLEES-IYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQ 164 (391)
T ss_pred cCCceEEEEEccceEEEEEccc-EEEEecccceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccce
Confidence 3557788888888888887765 99999999999888764 44456666666677788744 336889999999998
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCe-EEEEEcCCCceeEEEe
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT-LRTWNLVKGRSAYITN 137 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~ 137 (139)
....+ ..|.+. +.+++|+++|.+|+++++.|+ ||+|.+.+|+.++.+.
T Consensus 165 ~v~~I-~aH~~~-lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFR 213 (391)
T KOG2110|consen 165 PVNTI-NAHKGP-LAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFR 213 (391)
T ss_pred eeeEE-EecCCc-eeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeee
Confidence 88888 577777 999999999999999999988 8999999999887753
No 140
>KOG1274|consensus
Probab=99.65 E-value=7.9e-15 Score=103.22 Aligned_cols=122 Identities=20% Similarity=0.327 Sum_probs=102.9
Q ss_pred eEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
++.++.+ +|++++.|+.|-.|++-+..+......+.+|+++|.++.|+|++++||+.+.||.|++||++++.....+.
T Consensus 98 p~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~ 177 (933)
T KOG1274|consen 98 PIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLT 177 (933)
T ss_pred cceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcc
Confidence 4445555 88899999999999999999999999999999999999999999999999999999999999887665542
Q ss_pred eCC-----C-CcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 94 KAH-----K-GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 94 ~~~-----~-~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
... . ...+..++|+|++..++..+.|+.|.+|+..+....+.+.
T Consensus 178 ~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr 227 (933)
T KOG1274|consen 178 GVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLR 227 (933)
T ss_pred cCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeec
Confidence 211 1 2236779999999999999999999999998887766553
No 141
>KOG1036|consensus
Probab=99.65 E-value=1e-14 Score=91.85 Aligned_cols=112 Identities=18% Similarity=0.213 Sum_probs=92.5
Q ss_pred eeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEE
Q psy11518 14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 91 (139)
...|..+.| ....|++++.||++++||+........++ |..++.+++|.+ ...+++|+-||.|+.+|+.++.....
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~-~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~~~~~~i 90 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFK-HGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNTGNEDQI 90 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhhee-cCCceeeeeccC-CceEEEeccCceEEEEEecCCcceee
Confidence 456777777 56677778899999999998876555554 888999999986 46788999999999999988766544
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
- .|... +.++...+....+++|+.|++|++||.++.
T Consensus 91 g--th~~~-i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~ 126 (323)
T KOG1036|consen 91 G--THDEG-IRCIEYSYEVGCVISGSWDKTIKFWDPRNK 126 (323)
T ss_pred c--cCCCc-eEEEEeeccCCeEEEcccCccEEEEecccc
Confidence 3 44444 999999998899999999999999999953
No 142
>KOG0268|consensus
Probab=99.64 E-value=1.8e-15 Score=97.23 Aligned_cols=126 Identities=15% Similarity=0.307 Sum_probs=95.9
Q ss_pred ecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC--
Q psy11518 11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS-- 85 (139)
Q Consensus 11 ~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-- 85 (139)
.+|...|.|++- .-..+++|+.||.|++||+....++.++..|.+.|..+++.. ..+++++.|.+|+.|.+..
T Consensus 63 ~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk~~~~p 140 (433)
T KOG0268|consen 63 DGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWKIDGPP 140 (433)
T ss_pred cccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeeeccCCc
Confidence 578888888874 235689999999999999999999999999999999999976 6678888899899887422
Q ss_pred -------------------------ceEEEEEEeC---------CCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCC
Q psy11518 86 -------------------------WQLEKLFKKA---------HKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 86 -------------------------~~~~~~~~~~---------~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 130 (139)
|+.+..+... -....|.++.|+|... .|+++++|+.|.+||++++
T Consensus 141 ~~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~ 220 (433)
T KOG0268|consen 141 LHTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQA 220 (433)
T ss_pred ceeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccC
Confidence 1111111000 0111277888888554 6777889999999999999
Q ss_pred ceeEEEec
Q psy11518 131 RSAYITNL 138 (139)
Q Consensus 131 ~~~~~~~~ 138 (139)
+++..+.+
T Consensus 221 ~Pl~KVi~ 228 (433)
T KOG0268|consen 221 SPLKKVIL 228 (433)
T ss_pred Cccceeee
Confidence 99877643
No 143
>KOG0322|consensus
Probab=99.64 E-value=5.7e-15 Score=91.56 Aligned_cols=113 Identities=19% Similarity=0.304 Sum_probs=89.8
Q ss_pred ceeeEEEEec---CC--cEEEEeCCCCeEEEEEccCCceeeEE-------------------------------------
Q psy11518 13 HTASVRSVAA---TS--KLAASSGADETVVLYDMVKRKQSGAL------------------------------------- 50 (139)
Q Consensus 13 ~~~~v~~~~~---~~--~~l~~~~~~~~v~i~~~~~~~~~~~~------------------------------------- 50 (139)
..+.++|..+ .+ -++++|.++|.+.+||+.++..+..+
T Consensus 149 Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dk 228 (323)
T KOG0322|consen 149 KLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDK 228 (323)
T ss_pred ccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCcccc
Confidence 4567777774 23 35678889999999999875221111
Q ss_pred -------------------EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCc
Q psy11518 51 -------------------MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK 111 (139)
Q Consensus 51 -------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (139)
.-..-.|..+...||++.+|+++.|+.|++|..++..++..+ .-|... |.+++|+|+..
T Consensus 229 l~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVL-kyHsag-vn~vAfspd~~ 306 (323)
T KOG0322|consen 229 LVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVL-KYHSAG-VNAVAFSPDCE 306 (323)
T ss_pred ceeeeeccccCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhh-hhhhcc-eeEEEeCCCCc
Confidence 001224677788899999999999999999999999999988 556666 99999999999
Q ss_pred EEEEEcCCCeEEEEEc
Q psy11518 112 LALSVGKDKTLRTWNL 127 (139)
Q Consensus 112 ~l~~~~~d~~i~i~d~ 127 (139)
.++.++.|++|.+|++
T Consensus 307 lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 307 LMAAASKDARISLWKL 322 (323)
T ss_pred hhhhccCCceEEeeec
Confidence 9999999999999987
No 144
>KOG0649|consensus
Probab=99.64 E-value=2e-14 Score=88.46 Aligned_cols=128 Identities=14% Similarity=0.233 Sum_probs=99.7
Q ss_pred EEEeecceeeEEEEecCCcEEEEeCCCCeEEEEEccCCc------eeeEEE--ec-----CCCeEEEEECCCCCEEEEec
Q psy11518 7 TFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRK------QSGALM--QH-----EGTITCLKFTPEGSHLISCS 73 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~------~~~~~~--~~-----~~~v~~~~~~~~~~~l~~~~ 73 (139)
.+..++|.+++..+.|...+|++|+. |.|+-|...... ++.+.. -| -..|+++...|..+-++.++
T Consensus 55 iv~eqahdgpiy~~~f~d~~Lls~gd-G~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~Ag 133 (325)
T KOG0649|consen 55 IVPEQAHDGPIYYLAFHDDFLLSGGD-GLVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAG 133 (325)
T ss_pred eeeccccCCCeeeeeeehhheeeccC-ceEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEec
Confidence 34557899999999997777777764 999988764321 111111 11 23588999999777777777
Q ss_pred CCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 74 ~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.|+.+..||+.+++....+ ..|... +.++.--.....+++|++||++++||+++++.+..+.
T Consensus 134 GD~~~y~~dlE~G~i~r~~-rGHtDY-vH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie 195 (325)
T KOG0649|consen 134 GDGVIYQVDLEDGRIQREY-RGHTDY-VHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIE 195 (325)
T ss_pred CCeEEEEEEecCCEEEEEE-cCCcce-eeeeeecccCcceeecCCCccEEEEeccccceeEEec
Confidence 9999999999999999988 788877 8888875556679999999999999999999988764
No 145
>KOG0771|consensus
Probab=99.63 E-value=2.1e-14 Score=93.51 Aligned_cols=120 Identities=16% Similarity=0.195 Sum_probs=97.7
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE-----
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK----- 90 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~----- 90 (139)
.++++.++|..+++++.||.+|+|+......+.....|...|.++.|+|+++.|++-+.| ..++|+.+++..+.
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 666777799999999999999999988887787888899999999999999999999999 89999987761110
Q ss_pred ---------------------EE--E------------eCCC------------CcceeEEEEccCCcEEEEEcCCCeEE
Q psy11518 91 ---------------------LF--K------------KAHK------------GTAVNHISIHPSGKLALSVGKDKTLR 123 (139)
Q Consensus 91 ---------------------~~--~------------~~~~------------~~~v~~~~~~~~~~~l~~~~~d~~i~ 123 (139)
.. . ..+. ...|++++.+++|++++.|+.||.|.
T Consensus 227 ~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVa 306 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVA 306 (398)
T ss_pred ccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEE
Confidence 00 0 0000 11389999999999999999999999
Q ss_pred EEEcCCCceeEEE
Q psy11518 124 TWNLVKGRSAYIT 136 (139)
Q Consensus 124 i~d~~~~~~~~~~ 136 (139)
|++..+-+.++..
T Consensus 307 i~~~~~lq~~~~v 319 (398)
T KOG0771|consen 307 IYDAKSLQRLQYV 319 (398)
T ss_pred EEEeceeeeeEee
Confidence 9999887776543
No 146
>KOG1273|consensus
Probab=99.63 E-value=1.9e-15 Score=95.80 Aligned_cols=81 Identities=19% Similarity=0.476 Sum_probs=72.9
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 57 ITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 57 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..|+.|++.|.++|.|+.||.+.+||+.+......+ ..|..+ |.+++|+++|+.|++++.|..+.+||+..|.+++.+
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~l-saH~~p-i~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri 103 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARML-SAHVRP-ITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI 103 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhh-hccccc-eeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence 589999999999999999999999999988866666 555554 999999999999999999999999999999999888
Q ss_pred ecC
Q psy11518 137 NLS 139 (139)
Q Consensus 137 ~~~ 139 (139)
.|+
T Consensus 104 rf~ 106 (405)
T KOG1273|consen 104 RFD 106 (405)
T ss_pred Ecc
Confidence 763
No 147
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.63 E-value=1.7e-13 Score=88.69 Aligned_cols=118 Identities=14% Similarity=0.156 Sum_probs=88.0
Q ss_pred EEEecCCcEEEE-eCCCCeEEEEEccCCceeeEEEecC-------CCeEEEEECCCCCEEEE-ecCCCcEEEEEeCCceE
Q psy11518 18 RSVAATSKLAAS-SGADETVVLYDMVKRKQSGALMQHE-------GTITCLKFTPEGSHLIS-CSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 18 ~~~~~~~~~l~~-~~~~~~v~i~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~-~~~d~~i~~~d~~~~~~ 88 (139)
..+.++++.+++ +..++.|.+||+++++.+..+..+. .....++|+|++++++. ...++.+.+||.++++.
T Consensus 162 ~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~~~~~ 241 (300)
T TIGR03866 162 AEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAKTYEV 241 (300)
T ss_pred EEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECCCCcE
Confidence 344558887754 4568999999999987766654321 12346889999998544 45566899999998887
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEE-cCCCeEEEEEcCCCceeEEEec
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSV-GKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
...+... . .+.+++|+|++++|+++ +.++.|.+||+++++.+..+.+
T Consensus 242 ~~~~~~~--~-~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~ 289 (300)
T TIGR03866 242 LDYLLVG--Q-RVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKV 289 (300)
T ss_pred EEEEEeC--C-CcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEc
Confidence 6655222 2 38899999999998876 4689999999999998877654
No 148
>KOG3881|consensus
Probab=99.63 E-value=9.1e-15 Score=94.60 Aligned_cols=120 Identities=19% Similarity=0.240 Sum_probs=103.9
Q ss_pred eeEEEEec-C---CcEEEEeCCCCeEEEEEccCC-ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 15 ASVRSVAA-T---SKLAASSGADETVVLYDMVKR-KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 15 ~~v~~~~~-~---~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
..++++.| . ...|++++.-+.+++||+..+ +++..+..-+.+++++...|.++.+++|...+.+..||++.+...
T Consensus 203 vW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~ 282 (412)
T KOG3881|consen 203 VWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLL 282 (412)
T ss_pred eeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceee
Confidence 34566667 2 568999999999999999876 677888888889999999999999999999999999999999988
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
........++ ++++..+|..++++++|-|+.+||+|+.+.+++..
T Consensus 283 g~~~kg~tGs-irsih~hp~~~~las~GLDRyvRIhD~ktrkll~k 327 (412)
T KOG3881|consen 283 GCGLKGITGS-IRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHK 327 (412)
T ss_pred ccccCCccCC-cceEEEcCCCceEEeeccceeEEEeecccchhhhh
Confidence 8753555555 99999999999999999999999999999776543
No 149
>KOG1310|consensus
Probab=99.62 E-value=3.8e-15 Score=100.40 Aligned_cols=120 Identities=23% Similarity=0.386 Sum_probs=98.2
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE-ecCCCeEEEEECC--CCCEEEEecCCCcEEEEEe
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTP--EGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~ 83 (139)
...||.+-|.|+.| +|.+|++|+.|..+.|||+...++++.+. +|.+.|.++.|-| +.+.+++|..|..|+++|+
T Consensus 45 eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl 124 (758)
T KOG1310|consen 45 ELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDL 124 (758)
T ss_pred hhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEec
Confidence 34589999999999 99999999999999999998888877654 8999999999999 4568899999999999999
Q ss_pred CCce----------EEEEEEeCCCCcceeEEEEccCC-cEEEEEcCCCeEEEEEcCCC
Q psy11518 84 GSWQ----------LEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 84 ~~~~----------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~ 130 (139)
...+ ....+ ..|... |-.++-.|++ ..+.++++||.++-+|++..
T Consensus 125 ~~~~~~~~d~~~~~~~~~~-~cht~r-VKria~~p~~PhtfwsasEDGtirQyDiREp 180 (758)
T KOG1310|consen 125 DSSKEGGMDHGMEETTRCW-SCHTDR-VKRIATAPNGPHTFWSASEDGTIRQYDIREP 180 (758)
T ss_pred ccccccccccCccchhhhh-hhhhhh-hhheecCCCCCceEEEecCCcceeeecccCC
Confidence 7421 11222 223333 7778888888 68899999999999999874
No 150
>KOG2096|consensus
Probab=99.62 E-value=1.6e-14 Score=91.85 Aligned_cols=115 Identities=16% Similarity=0.276 Sum_probs=92.7
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe---CCce
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV---GSWQ 87 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~---~~~~ 87 (139)
|...+..+-- ++.++++++.|..|.+|+++ |+.+..+......-+..+.+|+|+++++++.-..+++|.+ +.|.
T Consensus 186 h~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~ 264 (420)
T KOG2096|consen 186 HQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGT 264 (420)
T ss_pred cccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcc
Confidence 4444555443 78899999999999999987 8888888877777778899999999999999999999986 2222
Q ss_pred ---EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 88 ---LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 88 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
....+....+...|..++|+++...+++.+-||.+++||+.
T Consensus 265 fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 265 FQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred hhhhhhhheeccchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 23344444444559999999999999999999999999975
No 151
>KOG0290|consensus
Probab=99.62 E-value=2.9e-14 Score=89.57 Aligned_cols=119 Identities=20% Similarity=0.328 Sum_probs=92.7
Q ss_pred cceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCce---eeEEEecCCCeEEEEECCCC-CEEEEecCCCcEEEEEeC
Q psy11518 12 SHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQ---SGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 12 ~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~---~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~ 84 (139)
.+..+++++.| +.+++.+.+-|.+..|||++++.. ...+-.|..+|..++|...+ ..+|+.+.||.+++||++
T Consensus 148 ~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR 227 (364)
T KOG0290|consen 148 EFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLR 227 (364)
T ss_pred ccCCcccccccccCCcceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEec
Confidence 35567888888 788999999999999999998733 45577899999999999854 578999999999999996
Q ss_pred CceEEEEE----------------------------------------------EeCCCCcceeEEEEccC-CcEEEEEc
Q psy11518 85 SWQLEKLF----------------------------------------------KKAHKGTAVNHISIHPS-GKLALSVG 117 (139)
Q Consensus 85 ~~~~~~~~----------------------------------------------~~~~~~~~v~~~~~~~~-~~~l~~~~ 117 (139)
..+....+ ....+...|..++|.|. ...|.+++
T Consensus 228 ~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaG 307 (364)
T KOG0290|consen 228 SLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAG 307 (364)
T ss_pred ccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecC
Confidence 42211000 01123334999999995 45899999
Q ss_pred CCCeEEEEEcCCC
Q psy11518 118 KDKTLRTWNLVKG 130 (139)
Q Consensus 118 ~d~~i~i~d~~~~ 130 (139)
+|.++.+||+.+-
T Consensus 308 DD~qaliWDl~q~ 320 (364)
T KOG0290|consen 308 DDCQALIWDLQQM 320 (364)
T ss_pred CcceEEEEecccc
Confidence 9999999999764
No 152
>KOG0639|consensus
Probab=99.62 E-value=1.6e-15 Score=101.31 Aligned_cols=122 Identities=16% Similarity=0.323 Sum_probs=100.6
Q ss_pred eeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEE---
Q psy11518 15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL--- 91 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~--- 91 (139)
.+..++++|.+...++..||.|.|||+.+...+..|++|...+.|+..+++|..|-+|+-|.+++.||++++..+..
T Consensus 512 CyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF 591 (705)
T KOG0639|consen 512 CYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDF 591 (705)
T ss_pred hhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhh
Confidence 34556667999999999999999999999999999999999999999999999999999999999999976432210
Q ss_pred -----------------------------------EEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 92 -----------------------------------FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 92 -----------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+....+..-|.++.|.+-|+++++.+.|+.+..|.+..|..+++.
T Consensus 592 ~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqs 671 (705)
T KOG0639|consen 592 SSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS 671 (705)
T ss_pred hhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeec
Confidence 111112223889999999999999999999999998887766553
No 153
>KOG0642|consensus
Probab=99.61 E-value=1.1e-14 Score=97.81 Aligned_cols=119 Identities=22% Similarity=0.343 Sum_probs=96.0
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccC--------CceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVK--------RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
|...+..+.+ ....|++++.|+.+.+|++.. -+++.+|.+|.++|.|+++.+++..+.+|+-||.|+.|+
T Consensus 293 ~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~ 372 (577)
T KOG0642|consen 293 HDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWN 372 (577)
T ss_pred chhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeeec
Confidence 4444444444 777899999999999999832 267889999999999999999999999999999999996
Q ss_pred eCCce---------EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 83 VGSWQ---------LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 83 ~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
+.... .+...-.+|.+. ++.+++|+....|++++.||+++.|+.....+
T Consensus 373 ~p~n~dp~ds~dp~vl~~~l~Ghtda-vw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~ 430 (577)
T KOG0642|consen 373 LPPNQDPDDSYDPSVLSGTLLGHTDA-VWLLALSSTKDRLLSCSSDGTVRLWEPTEESP 430 (577)
T ss_pred cCCCCCcccccCcchhccceeccccc-eeeeeecccccceeeecCCceEEeeccCCcCc
Confidence 64221 222222566766 99999999999999999999999999876655
No 154
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.61 E-value=1.5e-13 Score=88.89 Aligned_cols=109 Identities=14% Similarity=0.220 Sum_probs=86.8
Q ss_pred CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEE-EEecCCCcEEEEEeCCceEEEEEEeCCCCccee
Q psy11518 24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 24 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 102 (139)
+..+++++.|+.+.+||+.+++.+..+..+.. +..++|+|+++.+ ++++.++.|.+||..+++....+. .+ .. +.
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~-~~-~~ 76 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLP-SG-PD-PE 76 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEecc-CC-CC-cc
Confidence 35788999999999999999988888876544 5789999999876 567788999999999888766652 22 22 56
Q ss_pred EEEEccCCcEEEEE-cCCCeEEEEEcCCCceeEEE
Q psy11518 103 HISIHPSGKLALSV-GKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 103 ~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~ 136 (139)
.++|+|+++.++++ +.++.+.+||+++++.+..+
T Consensus 77 ~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~ 111 (300)
T TIGR03866 77 LFALHPNGKILYIANEDDNLVTVIDIETRKVLAEI 111 (300)
T ss_pred EEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEe
Confidence 78999999977655 56899999999988766554
No 155
>KOG1009|consensus
Probab=99.61 E-value=1.8e-14 Score=93.65 Aligned_cols=125 Identities=22% Similarity=0.269 Sum_probs=105.8
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEcc--------C--------CceeeEEEecCCCeEEEEECCCCCEEEEe
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMV--------K--------RKQSGALMQHEGTITCLKFTPEGSHLISC 72 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~--------~--------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 72 (139)
..|...++++.| +|+++++|+.+|.|.+|-.. + ......+.+|...+..++|+|++++++++
T Consensus 62 s~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~ 141 (434)
T KOG1009|consen 62 SRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSG 141 (434)
T ss_pred cCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeee
Confidence 357778888887 88899999999999999876 2 11234566899999999999999999999
Q ss_pred cCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 73 SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 73 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+.|..+++||+..|.....+ ..|... +..++|.|-.+++++-+.|+..+.+++...+.+..+.
T Consensus 142 s~dns~~l~Dv~~G~l~~~~-~dh~~y-vqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~ 204 (434)
T KOG1009|consen 142 SVDNSVRLWDVHAGQLLAIL-DDHEHY-VQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHG 204 (434)
T ss_pred eccceEEEEEeccceeEeec-cccccc-cceeecchhhhhhhhhccCcccceeeeeeeeeeeeee
Confidence 99999999999999998888 566655 9999999999999999999988888887766665543
No 156
>KOG0321|consensus
Probab=99.61 E-value=9.9e-15 Score=99.51 Aligned_cols=123 Identities=22% Similarity=0.383 Sum_probs=92.8
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeE--EEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCC
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGA--LMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~--~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~ 85 (139)
..|...|+++.| ....|++++.|.++++||+++.+.... +.+|...|.+++|.| +...|++|+.||.+.+||++-
T Consensus 97 ~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~ 176 (720)
T KOG0321|consen 97 LAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRC 176 (720)
T ss_pred ccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEec
Confidence 468889999998 556789999999999999999988766 889999999999999 566789999999999999864
Q ss_pred ceEE--------------------EEEE------eCCCCcceeE---EEEccCCcEEEEEcC-CCeEEEEEcCCCceeE
Q psy11518 86 WQLE--------------------KLFK------KAHKGTAVNH---ISIHPSGKLALSVGK-DKTLRTWNLVKGRSAY 134 (139)
Q Consensus 86 ~~~~--------------------~~~~------~~~~~~~v~~---~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~ 134 (139)
.... .... ..+. ..+.+ +-+..|...|++++. |+.|++||++......
T Consensus 177 n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s-~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~ 254 (720)
T KOG0321|consen 177 NGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAAS-NTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAY 254 (720)
T ss_pred cchhhHHHHhhhhhccccCCCCCCchhhcccccccccc-CceeeeeEEEEEeccceeeeccCCCcceEEEeeccccccc
Confidence 3200 0000 0011 11333 344458888998887 9999999999765443
No 157
>KOG1408|consensus
Probab=99.61 E-value=1.9e-14 Score=99.75 Aligned_cols=111 Identities=23% Similarity=0.312 Sum_probs=99.7
Q ss_pred EEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEe---cCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 17 VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQ---HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
-+++.+..+++++++.|..|+||++++++....|++ |++....+...|.|.|+++.+.|.++.++|..++++...+
T Consensus 601 Dm~Vdp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m- 679 (1080)
T KOG1408|consen 601 DMAVDPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQM- 679 (1080)
T ss_pred EeeeCCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhh-
Confidence 344556889999999999999999999999999875 6677888999999999999999999999999999998887
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
..|... |+.+.|.+|.+.|++.+.||.|.||.+..
T Consensus 680 ~GHsE~-VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 680 TGHSEA-VTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred cCcchh-eeeeeecccchhheeecCCceEEEEECch
Confidence 666666 99999999999999999999999998754
No 158
>KOG1445|consensus
Probab=99.60 E-value=3e-15 Score=102.56 Aligned_cols=118 Identities=20% Similarity=0.357 Sum_probs=96.4
Q ss_pred cceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 12 SHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 12 ~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
.|...|..+.| ..+.|++++.|-+|++||+.+++....+.+|...|..++|+|+|+.+|+.++||.|++|..+.++.
T Consensus 675 ~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~ 754 (1012)
T KOG1445|consen 675 IHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQ 754 (1012)
T ss_pred cccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCC
Confidence 56777788877 678899999999999999999999999999999999999999999999999999999999887654
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCC----CeEEEEEcCC
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVK 129 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~ 129 (139)
.-.-...-.+.+-..+.|.-+|+++++.+.| ++|.+||..+
T Consensus 755 pv~Eg~gpvgtRgARi~wacdgr~viv~Gfdk~SeRQv~~Y~Aq~ 799 (1012)
T KOG1445|consen 755 PVYEGKGPVGTRGARILWACDGRIVIVVGFDKSSERQVQMYDAQT 799 (1012)
T ss_pred ccccCCCCccCcceeEEEEecCcEEEEecccccchhhhhhhhhhh
Confidence 3222222223334667888899998888754 6788888765
No 159
>KOG0270|consensus
Probab=99.59 E-value=6.8e-15 Score=96.45 Aligned_cols=105 Identities=18% Similarity=0.237 Sum_probs=85.1
Q ss_pred CCcEEEEeCCCCeEEEEEccCC---ceeeE------------------EEecCCCeEEEEECCC-CCEEEEecCCCcEEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKR---KQSGA------------------LMQHEGTITCLKFTPE-GSHLISCSDDGSIAI 80 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~---~~~~~------------------~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~ 80 (139)
.|+++|.|+.+..|.|||+.-. .+..+ -.+|+..|..++|+.. .+.||+|+.|.+|++
T Consensus 191 ~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~l 270 (463)
T KOG0270|consen 191 AGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKL 270 (463)
T ss_pred CcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEE
Confidence 4779999999999999998521 11111 1257777888888874 567899999999999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCC
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~ 129 (139)
||+.++++...+ .+++.+|.++.|+| ....|++|+.|+++.+.|.|.
T Consensus 271 WD~~~g~p~~s~--~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 271 WDVDTGKPKSSI--THHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred EEcCCCCcceeh--hhcCCceeEEEecCCCceEEEeccccceEEeeeccC
Confidence 999999999888 35555699999999 456899999999999999994
No 160
>KOG0641|consensus
Probab=99.59 E-value=2.1e-13 Score=83.35 Aligned_cols=112 Identities=27% Similarity=0.422 Sum_probs=95.2
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc---eEEEEE
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW---QLEKLF 92 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~---~~~~~~ 92 (139)
...++.|.|++|++|-.|.+..+||+..+++++.+..|...|.|+.|+|...++++++.|..|++-|++.. ++....
T Consensus 235 aav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~v 314 (350)
T KOG0641|consen 235 AAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMV 314 (350)
T ss_pred EEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEE
Confidence 34455579999999999999999999999999999999999999999999999999999999999998742 222333
Q ss_pred EeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
...|+.. +..+.|+|..--+++.+.|.++.+|-+.
T Consensus 315 v~ehkdk-~i~~rwh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 315 VAEHKDK-AIQCRWHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred EEeccCc-eEEEEecCccceeeeccCcceEEEeccC
Confidence 2345554 7778999999999999999999999764
No 161
>KOG1007|consensus
Probab=99.59 E-value=2.4e-14 Score=89.88 Aligned_cols=115 Identities=18% Similarity=0.411 Sum_probs=89.4
Q ss_pred eeeEEEEec--CCcEEEEeCCCCeEEEEEccCCce-eeEEE-----ecCCCeEEEEECC--CCCEEEEecCCCcEEEEEe
Q psy11518 14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ-SGALM-----QHEGTITCLKFTP--EGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~-~~~~~-----~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~ 83 (139)
-+.+.|+.| ++..+++-. +..|.+|++..+.. ...+. +++...++-+|+| +++.+++.+ |+++..||+
T Consensus 123 vg~i~cvew~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~-d~tl~~~D~ 200 (370)
T KOG1007|consen 123 VGKINCVEWEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTS-DSTLQFWDL 200 (370)
T ss_pred hCceeeEEEcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeC-CCcEEEEEc
Confidence 346667666 777777655 78899999987755 33332 3566778889999 677777664 779999999
Q ss_pred CCceEEEEEEeCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCCc
Q psy11518 84 GSWQLEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~ 131 (139)
++......+...|... +..+.|+|+.+ +|+++++||.|+|||.|.-+
T Consensus 201 RT~~~~~sI~dAHgq~-vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk 248 (370)
T KOG1007|consen 201 RTMKKNNSIEDAHGQR-VRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK 248 (370)
T ss_pred cchhhhcchhhhhcce-eeeccCCCCceEEEEEcCCCccEEEEeccCCC
Confidence 9988888886666554 99999999887 67889999999999998754
No 162
>KOG0644|consensus
Probab=99.58 E-value=7.7e-16 Score=107.76 Aligned_cols=111 Identities=23% Similarity=0.375 Sum_probs=102.9
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
+|...|.|..+ .|.++++|+.|..++||..+++.++..+.+|.+.++.++.+.+..++++++.|..|++|.++.+.++
T Consensus 188 gH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pv 267 (1113)
T KOG0644|consen 188 GHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPV 267 (1113)
T ss_pred hhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchH
Confidence 68888999888 7999999999999999999999999999999999999999988889999999999999999999999
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
..+ ..|.+. |++++|+|-. +.+.||++++||.+
T Consensus 268 svL-rghtga-vtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 268 SVL-RGHTGA-VTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred HHH-hccccc-eeeeccCccc----cCCCCCceEecccc
Confidence 888 777877 9999999965 67889999999998
No 163
>KOG1188|consensus
Probab=99.58 E-value=4.7e-14 Score=90.09 Aligned_cols=118 Identities=22% Similarity=0.340 Sum_probs=89.6
Q ss_pred cceeeEEEEec----CCcEEEEeCCCCeEEEEEccCCceeeEE--EecC-CCeEEEEECCCCCEEEEecC----CCcEEE
Q psy11518 12 SHTASVRSVAA----TSKLAASSGADETVVLYDMVKRKQSGAL--MQHE-GTITCLKFTPEGSHLISCSD----DGSIAI 80 (139)
Q Consensus 12 ~~~~~v~~~~~----~~~~l~~~~~~~~v~i~~~~~~~~~~~~--~~~~-~~v~~~~~~~~~~~l~~~~~----d~~i~~ 80 (139)
+++..+..+.| ....+.+++.||.|++||+++......+ ..+. .+..|++.+-..+.+++|.. +-.+.+
T Consensus 68 ~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~l 147 (376)
T KOG1188|consen 68 GPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVL 147 (376)
T ss_pred CCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEE
Confidence 45555666666 3567899999999999999887554443 3343 35566666657778887753 556899
Q ss_pred EEeCCceE-EEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCC
Q psy11518 81 FRVGSWQL-EKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 81 ~d~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
||++..+. +..+...|... |++++|+| +.++|++|+.||.+.+||+...
T Consensus 148 wDvR~~qq~l~~~~eSH~DD-VT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d 198 (376)
T KOG1188|consen 148 WDVRSEQQLLRQLNESHNDD-VTQLRFHPSDPNLLLSGSVDGLVNLFDTKKD 198 (376)
T ss_pred EEeccccchhhhhhhhccCc-ceeEEecCCCCCeEEeecccceEEeeecCCC
Confidence 99998776 77776777777 99999999 4569999999999999999754
No 164
>KOG2919|consensus
Probab=99.57 E-value=5.4e-14 Score=89.52 Aligned_cols=115 Identities=23% Similarity=0.330 Sum_probs=91.8
Q ss_pred eeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC-CCcEEEEEeCCce-E
Q psy11518 14 TASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQ-L 88 (139)
Q Consensus 14 ~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~-~ 88 (139)
.+-+.|+++ +...++.|+...++-||.-...+++..+-+|.+.|+.++|.++|+.|.+|.+ +..|..||++... +
T Consensus 207 ~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~p 286 (406)
T KOG2919|consen 207 KGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDP 286 (406)
T ss_pred cceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccch
Confidence 344455554 7779999999999999999899999999999999999999999999998877 6789999998754 3
Q ss_pred EEEEEeCCCCcc--eeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 89 EKLFKKAHKGTA--VNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 89 ~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
+..+ ..|.+.. -.-....|.+++|++|+.||.|++||+++
T Consensus 287 v~~L-~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~ 328 (406)
T KOG2919|consen 287 VYAL-ERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKD 328 (406)
T ss_pred hhhh-hhhccCccceEEEecCCCCceeeccCCCccEEEEecCC
Confidence 3444 2222211 22245668999999999999999999987
No 165
>KOG4227|consensus
Probab=99.56 E-value=1.7e-13 Score=89.60 Aligned_cols=120 Identities=19% Similarity=0.263 Sum_probs=103.0
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccC------CceeeEEE-ecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVK------RKQSGALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
+|.+.|.++.| ++++|++|+.|..+++|+++. .+++.... .|.+.|.|+.|....+.+.+|..+++|..-|
T Consensus 54 ~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HD 133 (609)
T KOG4227|consen 54 EHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHD 133 (609)
T ss_pred hhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEeee
Confidence 68888889888 899999999999999999853 35554433 3558999999999999999999999999999
Q ss_pred eCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
+.+.+.+..+......+.|+.+..+|..+.+++.+.++.|.+||.+..+
T Consensus 134 iEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~ 182 (609)
T KOG4227|consen 134 IETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQ 182 (609)
T ss_pred cccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCC
Confidence 9999888887555544559999999999999999999999999998765
No 166
>KOG1408|consensus
Probab=99.55 E-value=5.7e-14 Score=97.48 Aligned_cols=123 Identities=21% Similarity=0.357 Sum_probs=98.9
Q ss_pred eeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC---CCCEEEEecCCCcEEEEEeCCceE---
Q psy11518 15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP---EGSHLISCSDDGSIAIFRVGSWQL--- 88 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~~~~--- 88 (139)
....++++++++|++|...|.+++|++...+.......|++.|.|+.|+. ..++||++++|..|++||....-.
T Consensus 462 ~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~q 541 (1080)
T KOG1408|consen 462 FRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQ 541 (1080)
T ss_pred eEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhh
Confidence 35667778999999999999999999999988888999999999999985 457889999999999999742100
Q ss_pred --------------------EEEEE---------------------eCC----CCcceeEEEEccCCcEEEEEcCCCeEE
Q psy11518 89 --------------------EKLFK---------------------KAH----KGTAVNHISIHPSGKLALSVGKDKTLR 123 (139)
Q Consensus 89 --------------------~~~~~---------------------~~~----~~~~v~~~~~~~~~~~l~~~~~d~~i~ 123 (139)
...+. ..+ ....+++++..|+.+++++++.|+.|+
T Consensus 542 tld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t~cQDrnir 621 (1080)
T KOG1408|consen 542 TLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVTVCQDRNIR 621 (1080)
T ss_pred hhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEEEecccceE
Confidence 00000 000 111378999999999999999999999
Q ss_pred EEEcCCCceeEEEe
Q psy11518 124 TWNLVKGRSAYITN 137 (139)
Q Consensus 124 i~d~~~~~~~~~~~ 137 (139)
|||+.+++.+..++
T Consensus 622 if~i~sgKq~k~FK 635 (1080)
T KOG1408|consen 622 IFDIESGKQVKSFK 635 (1080)
T ss_pred EEeccccceeeeec
Confidence 99999999988764
No 167
>KOG0642|consensus
Probab=99.54 E-value=3.7e-13 Score=90.71 Aligned_cols=81 Identities=22% Similarity=0.412 Sum_probs=67.6
Q ss_pred eEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccC------C----ceeeEEEecCCCeEEEEECCCCCEEEE
Q psy11518 4 LTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVK------R----KQSGALMQHEGTITCLKFTPEGSHLIS 71 (139)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~------~----~~~~~~~~~~~~v~~~~~~~~~~~l~~ 71 (139)
+...+.+.+|.++|.|+.. +++.+++|+.||.|+.|++.. . .....+.+|...|..+++++....|++
T Consensus 334 ~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Lls 413 (577)
T KOG0642|consen 334 VEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLS 413 (577)
T ss_pred eeeeEEEecccCceEEEEecCCceEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceee
Confidence 3455666789999999886 999999999999999996532 1 223567899999999999998889999
Q ss_pred ecCCCcEEEEEeC
Q psy11518 72 CSDDGSIAIFRVG 84 (139)
Q Consensus 72 ~~~d~~i~~~d~~ 84 (139)
++.||++++|+..
T Consensus 414 cs~DgTvr~w~~~ 426 (577)
T KOG0642|consen 414 CSSDGTVRLWEPT 426 (577)
T ss_pred ecCCceEEeeccC
Confidence 9999999999763
No 168
>KOG4328|consensus
Probab=99.54 E-value=1e-13 Score=91.46 Aligned_cols=121 Identities=22% Similarity=0.281 Sum_probs=92.3
Q ss_pred EEEeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCce-------------------------------------
Q psy11518 7 TFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQ------------------------------------- 46 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~------------------------------------- 46 (139)
.+.+.+|..+|.++.| +...+++.+.||+|+.-|++....
T Consensus 227 v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~i 306 (498)
T KOG4328|consen 227 VYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVI 306 (498)
T ss_pred eEEeccCCccccceEecCCChhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEE
Confidence 3455678888888887 777889999999999988864210
Q ss_pred --------eeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCCceEEE---EEEeCCCCcceeEEEEccCCcEEE
Q psy11518 47 --------SGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEK---LFKKAHKGTAVNHISIHPSGKLAL 114 (139)
Q Consensus 47 --------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~ 114 (139)
...+..|...|..++++| ...++||++.|+++++||++...... .....|... |.+..|+|.+-.|+
T Consensus 307 D~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~Hrrs-V~sAyFSPs~gtl~ 385 (498)
T KOG4328|consen 307 DLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRS-VNSAYFSPSGGTLL 385 (498)
T ss_pred EeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccce-eeeeEEcCCCCceE
Confidence 001123667899999999 45678999999999999998754333 222455555 99999999888899
Q ss_pred EEcCCCeEEEEEcC
Q psy11518 115 SVGKDKTLRTWNLV 128 (139)
Q Consensus 115 ~~~~d~~i~i~d~~ 128 (139)
+.+.|..|+|||..
T Consensus 386 TT~~D~~IRv~dss 399 (498)
T KOG4328|consen 386 TTCQDNEIRVFDSS 399 (498)
T ss_pred eeccCCceEEeecc
Confidence 99999999999983
No 169
>KOG1523|consensus
Probab=99.54 E-value=1.6e-13 Score=87.09 Aligned_cols=125 Identities=18% Similarity=0.249 Sum_probs=96.6
Q ss_pred eeeEEEEEeecceeeEEEEecCCcEEEEeCCCCeEEEEEccCC---ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcE
Q psy11518 2 YTLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKR---KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSI 78 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 78 (139)
|+..+++..+.......++++..+.|++++.|..-.+|....+ ++...+..+....+++.|+|.++.+|+|+....|
T Consensus 45 w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~i 124 (361)
T KOG1523|consen 45 WEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLI 124 (361)
T ss_pred ceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEE
Confidence 4556666644434444444458889999999999999998433 5666777788899999999999999999999999
Q ss_pred EEEEeCCceE---EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEc
Q psy11518 79 AIFRVGSWQL---EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 79 ~~~d~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 127 (139)
.+|=...... ...+..+.+.. |.+++|+|++-+++.|+.|+..++|..
T Consensus 125 sVcy~E~ENdWWVsKhikkPirSt-v~sldWhpnnVLlaaGs~D~k~rVfSa 175 (361)
T KOG1523|consen 125 SVCYYEQENDWWVSKHIKKPIRST-VTSLDWHPNNVLLAAGSTDGKCRVFSA 175 (361)
T ss_pred EEEEEecccceehhhhhCCccccc-eeeeeccCCcceecccccCcceeEEEE
Confidence 9887654332 22343444554 999999999999999999999999964
No 170
>KOG2048|consensus
Probab=99.53 E-value=7.8e-13 Score=90.81 Aligned_cols=122 Identities=18% Similarity=0.217 Sum_probs=93.1
Q ss_pred eeEEEEecCCcEEEEeCCCCeEEEEEccCCceee--EEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEE
Q psy11518 15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 92 (139)
..-+++.+.+..++.|+.||.+..++...++... .+...++.+.+++|+|++..+++|+.||.|++||...+......
T Consensus 113 IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~ 192 (691)
T KOG2048|consen 113 IWSIAINPENTILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHII 192 (691)
T ss_pred eeEEEeCCccceEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEe
Confidence 3444555688899999999988887777765543 35556789999999999999999999999999999988765522
Q ss_pred -----EeCC-CCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 93 -----KKAH-KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 93 -----~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.... ...-|+++.|- ....|++|...|.|.+||...+..++.+.
T Consensus 193 ~~~~d~l~k~~~~iVWSv~~L-rd~tI~sgDS~G~V~FWd~~~gTLiqS~~ 242 (691)
T KOG2048|consen 193 TMQLDRLSKREPTIVWSVLFL-RDSTIASGDSAGTVTFWDSIFGTLIQSHS 242 (691)
T ss_pred eecccccccCCceEEEEEEEe-ecCcEEEecCCceEEEEcccCcchhhhhh
Confidence 1111 22226777777 45579999999999999999998876653
No 171
>KOG2106|consensus
Probab=99.53 E-value=8.4e-13 Score=88.41 Aligned_cols=117 Identities=19% Similarity=0.331 Sum_probs=93.1
Q ss_pred eeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE---
Q psy11518 15 ASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK--- 90 (139)
Q Consensus 15 ~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~--- 90 (139)
..|.|+.| .+.-+++|..+|.|.||+..+.+..+....|.+.|.++....+|.++. |++|+.|..||- +-+.+.
T Consensus 247 k~Vl~v~F~engdviTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRki~~Wd~-~y~k~r~~e 324 (626)
T KOG2106|consen 247 KFVLCVTFLENGDVITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRKIILWDD-NYRKLRETE 324 (626)
T ss_pred eEEEEEEEcCCCCEEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee-cCccceEEeccc-ccccccccc
Confidence 78999999 667889999999999999988888777779999999999999998776 999999999983 111000
Q ss_pred -------------------------------------EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 91 -------------------------------------LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 91 -------------------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
.....|.. ....++.+|+..++++++.|+.+++|+ ..+++
T Consensus 325 lPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~d-elwgla~hps~~q~~T~gqdk~v~lW~--~~k~~ 401 (626)
T KOG2106|consen 325 LPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGD-ELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLE 401 (626)
T ss_pred CchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEeccc-ceeeEEcCCChhheeeccCcceEEEcc--CCcee
Confidence 00122333 378899999999999999999999999 55555
Q ss_pred EEE
Q psy11518 134 YIT 136 (139)
Q Consensus 134 ~~~ 136 (139)
...
T Consensus 402 wt~ 404 (626)
T KOG2106|consen 402 WTK 404 (626)
T ss_pred EEE
Confidence 544
No 172
>KOG2055|consensus
Probab=99.53 E-value=6.4e-13 Score=87.91 Aligned_cols=110 Identities=12% Similarity=0.196 Sum_probs=95.3
Q ss_pred EEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCC
Q psy11518 18 RSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHK 97 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~ 97 (139)
..+++++++|+..+..|.|.+....+++.+..++. .+.|..+.|+.+++.+..++.+|.|.+||++...++..+.....
T Consensus 309 FeVShd~~fia~~G~~G~I~lLhakT~eli~s~Ki-eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~ 387 (514)
T KOG2055|consen 309 FEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKI-EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGS 387 (514)
T ss_pred eEecCCCCeEEEcccCceEEeehhhhhhhhheeee-ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCc
Confidence 34556999999999999999999999999988874 57889999999999999999999999999999988888854444
Q ss_pred CcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 98 GTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 98 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
-. -+++|.++++.++++|+..|.|.|||..+
T Consensus 388 v~-gts~~~S~ng~ylA~GS~~GiVNIYd~~s 418 (514)
T KOG2055|consen 388 VH-GTSLCISLNGSYLATGSDSGIVNIYDGNS 418 (514)
T ss_pred cc-eeeeeecCCCceEEeccCcceEEEeccch
Confidence 33 56788889999999999999999999653
No 173
>KOG0307|consensus
Probab=99.52 E-value=1e-14 Score=104.52 Aligned_cols=122 Identities=21% Similarity=0.249 Sum_probs=93.9
Q ss_pred eeEEEEec--CCc----EEEEeCCCCeEEEEEccCC------ceeeEEEecCCCeEEEEECCC-CCEEEEecCCCcEEEE
Q psy11518 15 ASVRSVAA--TSK----LAASSGADETVVLYDMVKR------KQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIF 81 (139)
Q Consensus 15 ~~v~~~~~--~~~----~l~~~~~~~~v~i~~~~~~------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~ 81 (139)
.....+.| .+. .|+.|.+||.|.+||...- ..+.++..|.+.|..+.|++. ++.||+|+.||.|.+|
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iW 144 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIW 144 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEe
Confidence 34556666 222 5888999999999998652 345667789999999999994 5699999999999999
Q ss_pred EeCCceEEEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 82 RVGSWQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
|+.+.+.............|.+++|+. ....|++++.+|++.|||++..+++..+
T Consensus 145 Dlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~l 200 (1049)
T KOG0307|consen 145 DLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKL 200 (1049)
T ss_pred ccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCccccc
Confidence 998866555543222333499999997 4457788889999999999998776544
No 174
>KOG4378|consensus
Probab=99.52 E-value=4.3e-13 Score=89.77 Aligned_cols=125 Identities=20% Similarity=0.305 Sum_probs=101.7
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEec-CCCeEEEEECCCCC-EEEEecCCCcEEEEEeCCc
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQH-EGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~ 86 (139)
.+|...|+++.+ ...+|++++..|.|.+..+.++....+|... ...|..+.|+|..+ +|.+++.+|.|.+||+...
T Consensus 118 kdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~ 197 (673)
T KOG4378|consen 118 KDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGM 197 (673)
T ss_pred cCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceeeEeeccCCeEEEEeccCC
Confidence 468889999987 7889999999999999999998877777654 34455889999655 4568899999999999988
Q ss_pred eEEEEEEeCCCCcceeEEEEccC-CcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.++..+...|.. |...+||+|. ..++++.+.|.+|.+||.+..+....+
T Consensus 198 sp~~~~~~~HsA-P~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l 247 (673)
T KOG4378|consen 198 SPIFHASEAHSA-PCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRL 247 (673)
T ss_pred CcccchhhhccC-CcCcceecCCccceEEEecccceEEEeeccccccccee
Confidence 888877445554 4899999994 558889999999999999976654443
No 175
>KOG4378|consensus
Probab=99.52 E-value=4.6e-13 Score=89.61 Aligned_cols=107 Identities=15% Similarity=0.220 Sum_probs=90.5
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEE-EecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcc
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA 100 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 100 (139)
...+|.+++.+|.|.+||+....++..+ ..|..+...++|+| +..++++.+.|..|.+||++.......+...+ |
T Consensus 176 kr~lL~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~---P 252 (673)
T KOG4378|consen 176 KRFLLSIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSH---P 252 (673)
T ss_pred cceeeEeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecC---C
Confidence 5667889999999999999887777654 46889999999999 56678899999999999999877766663333 3
Q ss_pred eeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
...++|.++|.+|+.|...|.|..||+|..+.
T Consensus 253 lstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~ 284 (673)
T KOG4378|consen 253 LSTVAFSECGTYLCAGNSKGELIAYDMRSTKA 284 (673)
T ss_pred cceeeecCCceEEEeecCCceEEEEecccCCC
Confidence 88999999999999999999999999997543
No 176
>KOG2106|consensus
Probab=99.51 E-value=4.8e-12 Score=84.88 Aligned_cols=106 Identities=16% Similarity=0.275 Sum_probs=82.1
Q ss_pred cCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce-EEEEEEeCCCCcc
Q psy11518 22 ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ-LEKLFKKAHKGTA 100 (139)
Q Consensus 22 ~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~~~~~ 100 (139)
|.| .++.|...|...+.|.++...+..-. ..+++++++|+|+|.+||.|+.|+.|.+|.+.... ..... ..+++.+
T Consensus 417 psg-~va~Gt~~G~w~V~d~e~~~lv~~~~-d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~-~k~~gs~ 493 (626)
T KOG2106|consen 417 PSG-VVAVGTATGRWFVLDTETQDLVTIHT-DNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRV-GKCSGSP 493 (626)
T ss_pred Ccc-eEEEeeccceEEEEecccceeEEEEe-cCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEe-eeecCce
Confidence 355 67777777777777776644433333 37899999999999999999999999999986644 44444 4445577
Q ss_pred eeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
|+.+.|++|++++.+-+.|-.|..|.....
T Consensus 494 ithLDwS~Ds~~~~~~S~d~eiLyW~~~~~ 523 (626)
T KOG2106|consen 494 ITHLDWSSDSQFLVSNSGDYEILYWKPSEC 523 (626)
T ss_pred eEEeeecCCCceEEeccCceEEEEEccccC
Confidence 999999999999999999999999954433
No 177
>KOG1007|consensus
Probab=99.50 E-value=2.8e-13 Score=85.21 Aligned_cols=106 Identities=22% Similarity=0.365 Sum_probs=84.1
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEE-EecCCCeEEEEECCCCC-EEEEecCCCcEEEEEeCCceE-EEEEEeCCCCc
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQL-EKLFKKAHKGT 99 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~ 99 (139)
+++.+++.+ |+++..||.++.+....+ ..|...|..+.|+|+.+ +|++|+.||.|++||.+..+. ...+ .+|...
T Consensus 183 dgnqv~tt~-d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el-~~HsHW 260 (370)
T KOG1007|consen 183 DGNQVATTS-DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQEL-PGHSHW 260 (370)
T ss_pred ccceEEEeC-CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcccccc-CCCceE
Confidence 777777665 789999999987665444 46888899999999765 578999999999999987654 3444 455555
Q ss_pred ceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 100 AVNHISIHP-SGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 100 ~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
++++.|+| ..+++++++.|..|.+|...+-.
T Consensus 261 -vW~VRfn~~hdqLiLs~~SDs~V~Lsca~svS 292 (370)
T KOG1007|consen 261 -VWAVRFNPEHDQLILSGGSDSAVNLSCASSVS 292 (370)
T ss_pred -EEEEEecCccceEEEecCCCceeEEEeccccc
Confidence 99999999 55688899999999999876543
No 178
>KOG1523|consensus
Probab=99.49 E-value=2.2e-12 Score=82.05 Aligned_cols=116 Identities=12% Similarity=0.194 Sum_probs=96.5
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCC---ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe-CCc
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKR---KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV-GSW 86 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~-~~~ 86 (139)
...+|+|.+| |+..++++..+..|.||..... ++.++++.|...|+.+.|+|..+.+++++.|....+|.. ..+
T Consensus 9 ~~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~ 88 (361)
T KOG1523|consen 9 LLEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG 88 (361)
T ss_pred ccCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence 3466777777 8889999999999999998665 467889999999999999999999999999999999998 444
Q ss_pred eEEEEEE-eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 87 QLEKLFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 87 ~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
.....+. ..++.. ..++.|+|.++.+++|+..+.|.||-++.
T Consensus 89 ~WkptlvLlRiNrA-At~V~WsP~enkFAVgSgar~isVcy~E~ 131 (361)
T KOG1523|consen 89 TWKPTLVLLRINRA-ATCVKWSPKENKFAVGSGARLISVCYYEQ 131 (361)
T ss_pred eeccceeEEEeccc-eeeEeecCcCceEEeccCccEEEEEEEec
Confidence 4443332 233444 89999999999999999999999998764
No 179
>KOG1034|consensus
Probab=99.49 E-value=1.1e-13 Score=88.19 Aligned_cols=113 Identities=19% Similarity=0.401 Sum_probs=87.8
Q ss_pred cceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEE---EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 12 SHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGAL---MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 12 ~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
+|...|+.+.+ +.+++++++.|.+|++|++++..++..+ .+|...|.++.|++++.++++++.|..|++|++..
T Consensus 133 ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~ 212 (385)
T KOG1034|consen 133 GHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNV 212 (385)
T ss_pred ccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecCh
Confidence 56667778876 6679999999999999999999998776 47999999999999999999999999999999973
Q ss_pred ceEEEEE---------------------------EeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEc
Q psy11518 86 WQLEKLF---------------------------KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 86 ~~~~~~~---------------------------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 127 (139)
.+....+ ...|+. .|.|+.|- |.++++=+.++.|..|..
T Consensus 213 ~~f~~~lE~s~~~~~~~t~~pfpt~~~~fp~fst~diHrn-yVDCvrw~--gd~ilSkscenaI~~w~p 278 (385)
T KOG1034|consen 213 KEFKNKLELSITYSPNKTTRPFPTPKTHFPDFSTTDIHRN-YVDCVRWF--GDFILSKSCENAIVCWKP 278 (385)
T ss_pred hHHhhhhhhhcccCCCCccCcCCccccccccccccccccc-hHHHHHHH--hhheeecccCceEEEEec
Confidence 2211110 011122 24455554 578888888999999987
No 180
>KOG1188|consensus
Probab=99.48 E-value=7.6e-13 Score=84.68 Aligned_cols=108 Identities=18% Similarity=0.266 Sum_probs=89.1
Q ss_pred cEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC--CCCEEEEecCCCcEEEEEeCCceEEEEEEeC-CCCcce
Q psy11518 25 KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFRVGSWQLEKLFKKA-HKGTAV 101 (139)
Q Consensus 25 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-~~~~~v 101 (139)
..++++..+|+|++||..+++.+..++++...++.+.|.. .+..+.+++.||.|++||++.......+... +.+.+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 5688999999999999999999999999999999999976 4677889999999999999987765554333 333446
Q ss_pred eEEEEccCCcEEEEEc----CCCeEEEEEcCCCce
Q psy11518 102 NHISIHPSGKLALSVG----KDKTLRTWNLVKGRS 132 (139)
Q Consensus 102 ~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~~~ 132 (139)
.+++.+-+++.+++|. .+-.|.+||.|..+.
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq 155 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQ 155 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccc
Confidence 7777776888888886 478899999998776
No 181
>KOG1063|consensus
Probab=99.47 E-value=8.5e-13 Score=90.99 Aligned_cols=119 Identities=18% Similarity=0.246 Sum_probs=93.7
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCce----eeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ----SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
..+|.-.|+.+.| |+++|++.+.|.++.+|....... ....+.|..-|..++|+|++.+++|+++|..+++|..
T Consensus 568 L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~ 647 (764)
T KOG1063|consen 568 LEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEE 647 (764)
T ss_pred ecccceEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEec
Confidence 4478888888887 999999999999999999754311 2235679889999999999999999999999999999
Q ss_pred CCc--eEEEEEEeCCCCcceeEEEEcc-----CCcEEEEEcCCCeEEEEEcC
Q psy11518 84 GSW--QLEKLFKKAHKGTAVNHISIHP-----SGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 84 ~~~--~~~~~~~~~~~~~~v~~~~~~~-----~~~~l~~~~~d~~i~i~d~~ 128 (139)
... +.+..+.....+.+|+.+++.| .+..+++|-+.|.|.+|...
T Consensus 648 ~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 648 PDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred cCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 887 4444432334444599999887 22267778899999999854
No 182
>KOG0974|consensus
Probab=99.46 E-value=6.9e-13 Score=94.60 Aligned_cols=118 Identities=22% Similarity=0.405 Sum_probs=102.2
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceee-EEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
...+|.+.+..+.+ +|.++++.+.|.++++|++++.+... ..-+|...+..+.|.|+ .+++++.|.+.++|+...
T Consensus 170 ~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~ 247 (967)
T KOG0974|consen 170 RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN--RIITVGEDCTCRVWGVNG 247 (967)
T ss_pred eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc--eeEEeccceEEEEEeccc
Confidence 45689999999998 99999999999999999999987765 66789999999999988 899999999999997654
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
.++ ..+ ..|.+.-+..++..++..++++++.|+.+++||+...
T Consensus 248 ~~l-~~y-~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~r 290 (967)
T KOG0974|consen 248 TQL-EVY-DEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNGR 290 (967)
T ss_pred cee-hhh-hhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhcc
Confidence 433 355 4555555999999999999999999999999998654
No 183
>KOG1272|consensus
Probab=99.46 E-value=1.1e-13 Score=91.65 Aligned_cols=119 Identities=15% Similarity=0.235 Sum_probs=101.4
Q ss_pred eEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.+..+.| .--+|++++..|.++.-|+.+|+.+..+..-.+.+..+.-+|-...+-+|...|+|.+|.....+++-.+
T Consensus 211 ~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKi- 289 (545)
T KOG1272|consen 211 RVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKI- 289 (545)
T ss_pred chhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHHHH-
Confidence 3444444 4446788899999999999999999888877778888888998888999999999999999888877776
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..|.+. |.++++.++|+++++.|.|+.+.|||+++-..+.++
T Consensus 290 LcH~g~-V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~ 331 (545)
T KOG1272|consen 290 LCHRGP-VSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTY 331 (545)
T ss_pred HhcCCC-cceEEECCCCcEEeecccccceeEeeecccccccee
Confidence 567766 999999999999999999999999999988766554
No 184
>KOG2445|consensus
Probab=99.46 E-value=1.5e-12 Score=82.53 Aligned_cols=113 Identities=21% Similarity=0.346 Sum_probs=85.2
Q ss_pred ceeeEEEEec-----CCcEEEEeCCC-----CeEEEEEccCC----ceeeEEEecCCCeEEEEECCC----CCEEEEecC
Q psy11518 13 HTASVRSVAA-----TSKLAASSGAD-----ETVVLYDMVKR----KQSGALMQHEGTITCLKFTPE----GSHLISCSD 74 (139)
Q Consensus 13 ~~~~v~~~~~-----~~~~l~~~~~~-----~~v~i~~~~~~----~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~ 74 (139)
+..++.|++| ..++|++|+.+ +.+.||....+ ..+.++.+|..+|..++|.|+ ...+|+++.
T Consensus 168 ~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~lAvA~k 247 (361)
T KOG2445|consen 168 NKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLLAVATK 247 (361)
T ss_pred ccCcceEEeeccccccCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeEEEeec
Confidence 4456777776 56678888765 47888987554 234567799999999999994 357899999
Q ss_pred CCcEEEEEeCCc--------------------eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 75 DGSIAIFRVGSW--------------------QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 75 d~~i~~~d~~~~--------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
|| |++|.+... +.+..+ ..|++ +|..+.|+-.|..|.+.|.||.|++|...
T Consensus 248 Dg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~-~~H~~-~VWrv~wNmtGtiLsStGdDG~VRLWkan 318 (361)
T KOG2445|consen 248 DG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSEL-DDHNG-EVWRVRWNMTGTILSSTGDDGCVRLWKAN 318 (361)
T ss_pred Cc-EEEEEEeeccchhhhhcccCCCCccccceEEeeec-cCCCC-ceEEEEEeeeeeEEeecCCCceeeehhhh
Confidence 99 999998631 011222 33444 49999999999999999999999999653
No 185
>KOG0321|consensus
Probab=99.45 E-value=5.6e-13 Score=91.19 Aligned_cols=108 Identities=22% Similarity=0.325 Sum_probs=89.6
Q ss_pred CCcEEEEeCCCCeEEEEEccCCce------eeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEE-EEeC
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQ------SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL-FKKA 95 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~-~~~~ 95 (139)
....|+.+.++|.|.++|...... +.....|...|..+.|.|....|++++.|.++++||+.+..+... +..+
T Consensus 63 ~eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~G 142 (720)
T KOG0321|consen 63 KEHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLG 142 (720)
T ss_pred ccceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeecc
Confidence 566899999999999999765322 345567999999999999777899999999999999999887665 2256
Q ss_pred CCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCCc
Q psy11518 96 HKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 96 ~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~ 131 (139)
|.+. +.++||.|..+ .+++|+.||.+.|||++...
T Consensus 143 H~~S-vkS~cf~~~n~~vF~tGgRDg~illWD~R~n~ 178 (720)
T KOG0321|consen 143 HTGS-VKSECFMPTNPAVFCTGGRDGEILLWDCRCNG 178 (720)
T ss_pred cccc-cchhhhccCCCcceeeccCCCcEEEEEEeccc
Confidence 6666 99999999555 78899999999999998654
No 186
>KOG3914|consensus
Probab=99.45 E-value=1.5e-12 Score=84.67 Aligned_cols=104 Identities=22% Similarity=0.310 Sum_probs=83.1
Q ss_pred CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCc
Q psy11518 32 ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK 111 (139)
Q Consensus 32 ~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (139)
....+.+|....+. .....+|-+.++.++++||++.++++++|..|++-.....-.+..+..+|+.- |..++.-++ +
T Consensus 130 D~~~~di~s~~~~~-~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eF-VS~isl~~~-~ 206 (390)
T KOG3914|consen 130 DVYSFDILSADSGR-CEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEF-VSTISLTDN-Y 206 (390)
T ss_pred CceeeeeecccccC-cchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhh-eeeeeeccC-c
Confidence 33444555544432 33445899999999999999999999999999999888877788886778777 999998754 4
Q ss_pred EEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 112 LALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 112 ~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.|++++.|+++++||+++|+.+..+.+
T Consensus 207 ~LlS~sGD~tlr~Wd~~sgk~L~t~dl 233 (390)
T KOG3914|consen 207 LLLSGSGDKTLRLWDITSGKLLDTCDL 233 (390)
T ss_pred eeeecCCCCcEEEEecccCCcccccch
Confidence 599999999999999999998866543
No 187
>KOG1272|consensus
Probab=99.44 E-value=1.8e-13 Score=90.69 Aligned_cols=109 Identities=13% Similarity=0.291 Sum_probs=87.1
Q ss_pred ceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEE
Q psy11518 13 HTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 13 ~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 92 (139)
....+++-.|-+..+-+|..+|+|.+|.+...+++..+..|.++|.++++.++|+|++|.+.|..+++||++....+..+
T Consensus 252 G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~ 331 (545)
T KOG1272|consen 252 GRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTY 331 (545)
T ss_pred CccchhhcCCccceEEEcCCCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecccccccee
Confidence 34456666666668889999999999999999999888899999999999999999999999999999999988766666
Q ss_pred EeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
..++. ...+++|..| +++.+....+.||.
T Consensus 332 ~tp~~---a~~ls~Sqkg--lLA~~~G~~v~iw~ 360 (545)
T KOG1272|consen 332 RTPHP---ASNLSLSQKG--LLALSYGDHVQIWK 360 (545)
T ss_pred ecCCC---cccccccccc--ceeeecCCeeeeeh
Confidence 33222 6778887555 33444445788883
No 188
>KOG1963|consensus
Probab=99.44 E-value=5.2e-12 Score=88.82 Aligned_cols=112 Identities=17% Similarity=0.331 Sum_probs=94.4
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEEccC----CceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEE
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYDMVK----RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 91 (139)
.+..++++++++++|..||.|.+|.-.. ......++-|...|.+++|+++|.+|.+|+.+|.+.+|.+.+++ +.
T Consensus 209 t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~--kq 286 (792)
T KOG1963|consen 209 TCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK--KQ 286 (792)
T ss_pred eeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCC--cc
Confidence 4566667999999999999999997432 13345677899999999999999999999999999999999887 33
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
+ .+.-+++|..+.++||+...+...+|++|++..+.+-
T Consensus 287 f-LPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl 324 (792)
T KOG1963|consen 287 F-LPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDL 324 (792)
T ss_pred c-ccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccch
Confidence 3 4566677999999999999999999999999877544
No 189
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.44 E-value=2.5e-11 Score=74.45 Aligned_cols=97 Identities=19% Similarity=0.298 Sum_probs=69.1
Q ss_pred eEEEEEccC-CceeeEEEe-cCCCeEEEEECCCCCEEEE--ecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCC
Q psy11518 35 TVVLYDMVK-RKQSGALMQ-HEGTITCLKFTPEGSHLIS--CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG 110 (139)
Q Consensus 35 ~v~i~~~~~-~~~~~~~~~-~~~~v~~~~~~~~~~~l~~--~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 110 (139)
...+|.++. ..+...+.- ..++|..++|+|+++.++. |..+..+.+||++ ++.+..+. .. ++..+.|+|+|
T Consensus 38 ~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~---~~-~~n~i~wsP~G 112 (194)
T PF08662_consen 38 EFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG---TQ-PRNTISWSPDG 112 (194)
T ss_pred eEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec---CC-CceEEEECCCC
Confidence 455555532 233444432 3457999999999998754 4456789999996 55555552 22 37889999999
Q ss_pred cEEEEEcC---CCeEEEEEcCCCceeEEE
Q psy11518 111 KLALSVGK---DKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 111 ~~l~~~~~---d~~i~i~d~~~~~~~~~~ 136 (139)
+++++++. .|.+.+||.++.+.+...
T Consensus 113 ~~l~~~g~~n~~G~l~~wd~~~~~~i~~~ 141 (194)
T PF08662_consen 113 RFLVLAGFGNLNGDLEFWDVRKKKKISTF 141 (194)
T ss_pred CEEEEEEccCCCcEEEEEECCCCEEeecc
Confidence 99999874 467999999988877654
No 190
>KOG0307|consensus
Probab=99.44 E-value=3.1e-13 Score=97.11 Aligned_cols=123 Identities=23% Similarity=0.362 Sum_probs=97.5
Q ss_pred ceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCC--CeEEEEECCCC-CEEEEecCCC---cEEEEEe
Q psy11518 13 HTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEG--TITCLKFTPEG-SHLISCSDDG---SIAIFRV 83 (139)
Q Consensus 13 ~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~--~v~~~~~~~~~-~~l~~~~~d~---~i~~~d~ 83 (139)
....|.+++| ....|++++.+|...|||++..+++..+..+.. .++.++|+|+. ..+++++.|. .|.+||+
T Consensus 160 ~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWDl 239 (1049)
T KOG0307|consen 160 PPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWDL 239 (1049)
T ss_pred CcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeecc
Confidence 3467889999 455799999999999999999988888876654 36789999964 4566665543 4899999
Q ss_pred CCceE-EEEEEeCCCCcceeEEEEccCC-cEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 84 GSWQL-EKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 84 ~~~~~-~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+.... ...+ ..|..+ |.++.|++.+ .++++++.|++|.+||.++++.+..+.
T Consensus 240 R~assP~k~~-~~H~~G-ilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p 293 (1049)
T KOG0307|consen 240 RFASSPLKIL-EGHQRG-ILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELP 293 (1049)
T ss_pred cccCCchhhh-cccccc-eeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecC
Confidence 87553 4444 566666 9999999966 799999999999999999998887653
No 191
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.43 E-value=6.4e-11 Score=78.92 Aligned_cols=120 Identities=33% Similarity=0.516 Sum_probs=95.5
Q ss_pred eecceeeEEEEec--CCcEEEEeCC-CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCC-EEEEecCCCcEEEEEeCC
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGA-DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~-~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~ 85 (139)
...|...+..+.+ ++..++.++. ++.+++|+...++.+..+.+|...+.+++|+|++. .+++++.|+.+.+||...
T Consensus 151 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~ 230 (466)
T COG2319 151 LEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLST 230 (466)
T ss_pred EecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCC
Confidence 3355565665555 7778888885 99999999999888889999999999999999887 555659999999999887
Q ss_pred ceEEE-EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 86 WQLEK-LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 86 ~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
+.... .+ ..+... . ...|+|++..+++++.|+.+++|+++....
T Consensus 231 ~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 275 (466)
T COG2319 231 GKLLRSTL-SGHSDS-V-VSSFSPDGSLLASGSSDGTIRLWDLRSSSS 275 (466)
T ss_pred CcEEeeec-CCCCcc-e-eEeECCCCCEEEEecCCCcEEEeeecCCCc
Confidence 77666 34 344433 3 238999998889999999999999987664
No 192
>KOG0322|consensus
Probab=99.43 E-value=4.8e-13 Score=83.16 Aligned_cols=67 Identities=18% Similarity=0.374 Sum_probs=63.7
Q ss_pred EEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 17 VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
-..+.+|++.+|+++.|+.|++|..++.+++..++.|.+.|++++|+|+...+|.++.|+.|.+|++
T Consensus 256 gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 256 GVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred ceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 3567789999999999999999999999999999999999999999999999999999999999986
No 193
>KOG2055|consensus
Probab=99.43 E-value=9.9e-12 Score=82.42 Aligned_cols=126 Identities=16% Similarity=0.235 Sum_probs=99.5
Q ss_pred EeecceeeEEEEecCCc-EEEEeCCCCeEEEEEccCCcee--eEEEecC-CCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 9 VTHSHTASVRSVAATSK-LAASSGADETVVLYDMVKRKQS--GALMQHE-GTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 9 ~~~~~~~~v~~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~--~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
.+...+....++.++|. .+++++....++.||+.+.+.. ....++. ..+.....+|++++++..+..|.|.+....
T Consensus 254 ~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhak 333 (514)
T KOG2055|consen 254 HLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAK 333 (514)
T ss_pred eeccCccceeeecCCCceEEEecccceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhh
Confidence 33333444445556888 8899999999999999887543 3333443 345677789999999999999999999999
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+++.+..+... +. +..++|+.+++.|++++.+|.|.+||+++.+.++.+.
T Consensus 334 T~eli~s~Kie--G~-v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~ 383 (514)
T KOG2055|consen 334 TKELITSFKIE--GV-VSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFV 383 (514)
T ss_pred hhhhhheeeec--cE-EeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEe
Confidence 99988887433 33 9999999999999999999999999999998777653
No 194
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.42 E-value=3.2e-11 Score=80.65 Aligned_cols=108 Identities=16% Similarity=0.224 Sum_probs=83.4
Q ss_pred EEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEE
Q psy11518 27 AASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISI 106 (139)
Q Consensus 27 l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~ 106 (139)
+++-..++.|.+.|..+.+.+..+.........+.++|+++++.+.+.||.|.++|+.+.+....+..... ..++++
T Consensus 9 ~V~~~~~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~~---~~~i~~ 85 (369)
T PF02239_consen 9 YVVERGSGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGGN---PRGIAV 85 (369)
T ss_dssp EEEEGGGTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SSE---EEEEEE
T ss_pred EEEecCCCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCCC---cceEEE
Confidence 35666789999999999999999886544444577999999999999999999999999999888843332 788999
Q ss_pred ccCCcEEEEEc-CCCeEEEEEcCCCceeEEEe
Q psy11518 107 HPSGKLALSVG-KDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 107 ~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~ 137 (139)
++||++++++. .++.+.++|.++.+++..+.
T Consensus 86 s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~ 117 (369)
T PF02239_consen 86 SPDGKYVYVANYEPGTVSVIDAETLEPVKTIP 117 (369)
T ss_dssp --TTTEEEEEEEETTEEEEEETTT--EEEEEE
T ss_pred cCCCCEEEEEecCCCceeEeccccccceeecc
Confidence 99999988776 68999999999999988765
No 195
>KOG1240|consensus
Probab=99.42 E-value=8.8e-12 Score=90.83 Aligned_cols=127 Identities=18% Similarity=0.265 Sum_probs=93.0
Q ss_pred ecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCC-------ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy11518 11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR-------KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 11 ~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
+.|...+..++. ++.++++|+.||+|++|+.... +...++......+.++.+.+.+..+|.++.||.|.+
T Consensus 1045 ~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~ 1124 (1431)
T KOG1240|consen 1045 HEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRV 1124 (1431)
T ss_pred hhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEE
Confidence 345555555443 6689999999999999998542 223344445678899999999999999999999999
Q ss_pred EEeCCc--e-----------------EE----------------------------------EEEEeCCCCcceeEEEEc
Q psy11518 81 FRVGSW--Q-----------------LE----------------------------------KLFKKAHKGTAVNHISIH 107 (139)
Q Consensus 81 ~d~~~~--~-----------------~~----------------------------------~~~~~~~~~~~v~~~~~~ 107 (139)
.++... . .. +.++..-..+.|++++.+
T Consensus 1125 ~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~id 1204 (1431)
T KOG1240|consen 1125 LRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVID 1204 (1431)
T ss_pred EEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEec
Confidence 887431 0 00 000011122238999999
Q ss_pred cCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 108 PSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 108 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
|.+.+++.|+..|.+.+||+|-+.++..+.
T Consensus 1205 p~~~WlviGts~G~l~lWDLRF~~~i~sw~ 1234 (1431)
T KOG1240|consen 1205 PWCNWLVIGTSRGQLVLWDLRFRVPILSWE 1234 (1431)
T ss_pred CCceEEEEecCCceEEEEEeecCceeeccc
Confidence 999999999999999999999888776654
No 196
>KOG1538|consensus
Probab=99.41 E-value=1.6e-11 Score=85.23 Aligned_cols=109 Identities=16% Similarity=0.179 Sum_probs=83.8
Q ss_pred EEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc--------eEE
Q psy11518 18 RSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW--------QLE 89 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~--------~~~ 89 (139)
.+..|||..++.+.. ..+.+||+..|..+.++++|...|.|++|+.+|+.+|+|+.|..+.+|..+-- ..+
T Consensus 18 ~afkPDGsqL~lAAg-~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~I 96 (1081)
T KOG1538|consen 18 IAFKPDGTQLILAAG-SRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAI 96 (1081)
T ss_pred eEECCCCceEEEecC-CEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCee
Confidence 344458887776654 56899999999999999999999999999999999999999999999985321 111
Q ss_pred EEEE---------------------------eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEc
Q psy11518 90 KLFK---------------------------KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 90 ~~~~---------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 127 (139)
..+. ......++.+.+|..||++++.|-.+|+|.+-+-
T Consensus 97 QCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk 161 (1081)
T KOG1538|consen 97 QCMSFNPITHQLASCSLSDFGLWSPEQKSVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK 161 (1081)
T ss_pred eEeecCchHHHhhhcchhhccccChhhhhHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecC
Confidence 1110 0011224778899999999999999999988754
No 197
>KOG4328|consensus
Probab=99.40 E-value=7.7e-12 Score=82.79 Aligned_cols=120 Identities=15% Similarity=0.230 Sum_probs=90.8
Q ss_pred eEEEEe--c-CCcEEEEeCCCCeEEEEEccCCc----eeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe----C
Q psy11518 16 SVRSVA--A-TSKLAASSGADETVVLYDMVKRK----QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV----G 84 (139)
Q Consensus 16 ~v~~~~--~-~~~~l~~~~~~~~v~i~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~----~ 84 (139)
.|..+. | ...++++++.|++.+|||++.-. ++.....|...|.+..|||.+-.|++.+.|..|++||. .
T Consensus 324 KI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa 403 (498)
T KOG4328|consen 324 KITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISA 403 (498)
T ss_pred ccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccc
Confidence 555555 4 77789999999999999987532 22333468999999999997666999999999999998 3
Q ss_pred CceEEEEEEeCCCCc---ceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 85 SWQLEKLFKKAHKGT---AVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
...+...+...+... ...-..|.|+..++++|..-+.|.|||-..++.+..
T Consensus 404 ~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~e 457 (498)
T KOG4328|consen 404 KDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCE 457 (498)
T ss_pred cCCccceeeccCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeee
Confidence 334444443322221 145568999999999999999999999998886654
No 198
>KOG1587|consensus
Probab=99.40 E-value=2.5e-12 Score=88.98 Aligned_cols=117 Identities=20% Similarity=0.219 Sum_probs=91.2
Q ss_pred cceeeEEEEec---CCcEEEEeCCCCeEEEEEcc-CCceeeEEEecCCCeEEEEECCC-CCEEEEecCCCcEEEEEeCCc
Q psy11518 12 SHTASVRSVAA---TSKLAASSGADETVVLYDMV-KRKQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 12 ~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~ 86 (139)
.|.+++.++.+ ..+.+++++ |..+++|.-. ...++..+..+...+++++|||. ...++++..+|.|.+||+...
T Consensus 396 ~h~g~v~~v~~nPF~~k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~ 474 (555)
T KOG1587|consen 396 THIGPVYAVSRNPFYPKNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD 474 (555)
T ss_pred ccCcceEeeecCCCccceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc
Confidence 45666777664 455555555 9999999987 66778888888888999999995 567889999999999999776
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
.................+.|+++|+.+++|...|.+++|++..
T Consensus 475 ~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 475 DEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred ccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 5444432222344477889999999999999999999999964
No 199
>KOG0650|consensus
Probab=99.39 E-value=1.8e-11 Score=83.63 Aligned_cols=65 Identities=20% Similarity=0.365 Sum_probs=51.4
Q ss_pred eeeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCC
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS 67 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 67 (139)
|.....+.+.+|.+.+.+++. .|.+|++|+.||+|++|.+.+++++.++. ..+.|.|++|+|.+.
T Consensus 388 FPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~-~d~~I~~vaw~P~~~ 454 (733)
T KOG0650|consen 388 FPTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQ-FDSEIRSVAWNPLSD 454 (733)
T ss_pred CcceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEe-ecceeEEEEecCCCC
Confidence 344455667789998888875 89999999999999999999999988765 344677777777543
No 200
>KOG2111|consensus
Probab=99.37 E-value=8.8e-11 Score=74.82 Aligned_cols=77 Identities=25% Similarity=0.478 Sum_probs=66.8
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCe-EEEEEccCCceeeEEEe--cCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADET-VVLYDMVKRKQSGALMQ--HEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~-v~i~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
....|...|.|++. +|..+|+++..|+ |+|||..++..+.++.. ....|.+++|+|+..+||+++..|++++|.+
T Consensus 176 ~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFSp~~s~LavsSdKgTlHiF~l 255 (346)
T KOG2111|consen 176 IINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFSPNSSWLAVSSDKGTLHIFSL 255 (346)
T ss_pred EEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeCCCccEEEEEcCCCeEEEEEe
Confidence 34567777777776 9999999998885 78999999999999874 3467999999999999999999999999998
Q ss_pred CC
Q psy11518 84 GS 85 (139)
Q Consensus 84 ~~ 85 (139)
+.
T Consensus 256 ~~ 257 (346)
T KOG2111|consen 256 RD 257 (346)
T ss_pred ec
Confidence 65
No 201
>KOG2139|consensus
Probab=99.36 E-value=4.8e-11 Score=77.38 Aligned_cols=107 Identities=15% Similarity=0.273 Sum_probs=79.5
Q ss_pred EEeecceeeEEEEec--CCcEEEEeC-CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 8 FVTHSHTASVRSVAA--TSKLAASSG-ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~--~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
++..+| .+|+.+.| ||..+++++ .+..|+|||+.++..+-......+.++-+.|+|++.++..+..|+..++|+..
T Consensus 190 l~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPdgd~lfaAt~davfrlw~e~ 268 (445)
T KOG2139|consen 190 LQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPDGDVLFAATCDAVFRLWQEN 268 (445)
T ss_pred eeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCCCCEEEEecccceeeeehhc
Confidence 444455 78888888 888888887 56799999999987654443445678899999999999999999999999765
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCCcEEEEEc
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG 117 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 117 (139)
+.-..... .-..+ .|...+|+|.|++|+.+.
T Consensus 269 q~wt~erw-~lgsg-rvqtacWspcGsfLLf~~ 299 (445)
T KOG2139|consen 269 QSWTKERW-ILGSG-RVQTACWSPCGSFLLFAC 299 (445)
T ss_pred ccceecce-eccCC-ceeeeeecCCCCEEEEEE
Confidence 43322222 11223 499999999999776543
No 202
>KOG2321|consensus
Probab=99.34 E-value=2.2e-11 Score=82.91 Aligned_cols=132 Identities=20% Similarity=0.347 Sum_probs=99.0
Q ss_pred eEEEEEeecceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEe------cCC-----CeEEEEECCCCCEEEEe
Q psy11518 4 LTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQ------HEG-----TITCLKFTPEGSHLISC 72 (139)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~------~~~-----~v~~~~~~~~~~~l~~~ 72 (139)
++..|........+..+.....+|++|+.+|.|..||+.+...+..+.. |.+ .|+++.|+.+|-.+++|
T Consensus 167 fL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVG 246 (703)
T KOG2321|consen 167 FLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVG 246 (703)
T ss_pred cccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEee
Confidence 3445555555555666666777999999999999999988766665542 323 38999999999999999
Q ss_pred cCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCC--cEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 73 SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG--KLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 73 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
..+|.+.+||+++.+++..-.. ....+|..+.|.+.+ ..+++. +...++|||-.+|++...++
T Consensus 247 ts~G~v~iyDLRa~~pl~~kdh-~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiE 311 (703)
T KOG2321|consen 247 TSTGSVLIYDLRASKPLLVKDH-GYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIE 311 (703)
T ss_pred ccCCcEEEEEcccCCceeeccc-CCccceeeecccccCCCceEEec-chHHhhhcccccCCceeecc
Confidence 9999999999999888776633 334458899998753 344443 45679999999998876653
No 203
>KOG1524|consensus
Probab=99.33 E-value=1.4e-11 Score=83.44 Aligned_cols=113 Identities=19% Similarity=0.365 Sum_probs=85.7
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
.|.+.+.+-.| +|.-|+++++||.|++|. ++|....++-....+|.|++|.|+.+.++-+..+ .+.+=-+.....+
T Consensus 102 AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~-h~~IKpL~~n~k~ 179 (737)
T KOG1524|consen 102 AHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIVFCQGG-HISIKPLAANSKI 179 (737)
T ss_pred hhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceEEecCC-eEEEeecccccce
Confidence 46666666666 999999999999999998 5776666665667889999999987765544333 3444444444444
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
-.. ..|.+- |.++.|++...++++|++|-+..+||..
T Consensus 180 i~W-kAHDGi-iL~~~W~~~s~lI~sgGED~kfKvWD~~ 216 (737)
T KOG1524|consen 180 IRW-RAHDGL-VLSLSWSTQSNIIASGGEDFRFKIWDAQ 216 (737)
T ss_pred eEE-eccCcE-EEEeecCccccceeecCCceeEEeeccc
Confidence 444 456665 9999999999999999999999999974
No 204
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.31 E-value=7e-10 Score=73.95 Aligned_cols=112 Identities=29% Similarity=0.477 Sum_probs=90.2
Q ss_pred ecCCc-EEEEeCC-CCeEEEEEccC-CceeeEEEecCCCeEEEEECCCCCEEEEecC-CCcEEEEEeCCceEEEEEEeCC
Q psy11518 21 AATSK-LAASSGA-DETVVLYDMVK-RKQSGALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQLEKLFKKAH 96 (139)
Q Consensus 21 ~~~~~-~l~~~~~-~~~v~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~~~~~~~~~ 96 (139)
.+++. .++..+. ++.+.+|+... ......+..|...|..+.|+|++..++.++. ++.+++|+...+.....+ ..|
T Consensus 119 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 197 (466)
T COG2319 119 SPDGNSILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTL-AGH 197 (466)
T ss_pred CCCcceEEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEee-ccC
Confidence 44555 4554444 89999999988 7778888899999999999999998888885 999999999987777666 334
Q ss_pred CCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCCceeE
Q psy11518 97 KGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 97 ~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
... +.+++|+|++. .+++++.|+.+++||...+..+.
T Consensus 198 ~~~-v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~ 235 (466)
T COG2319 198 TDP-VSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLR 235 (466)
T ss_pred CCc-eEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEe
Confidence 444 99999999998 55555899999999988666654
No 205
>KOG2919|consensus
Probab=99.31 E-value=9e-11 Score=75.18 Aligned_cols=112 Identities=17% Similarity=0.332 Sum_probs=87.3
Q ss_pred EEEEecCCcEEEEeCCCCeEEEEEc-cCCcee--eE-----EEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCCce
Q psy11518 17 VRSVAATSKLAASSGADETVVLYDM-VKRKQS--GA-----LMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~~~~v~i~~~-~~~~~~--~~-----~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
..++++||..|++|. ...|++||+ +.++.. .. -.+..+-+.|++|+| +...++.++....+-++.-..+.
T Consensus 163 sL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~ 241 (406)
T KOG2919|consen 163 SLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRR 241 (406)
T ss_pred eEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCC
Confidence 345555999998775 578999998 444321 11 113466789999999 45688999998899999888888
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcC-CCeEEEEEcCCCc
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKGR 131 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~ 131 (139)
++..+ ..|.++ |+.++|+++|+.+.+|.. |..|..||+|..+
T Consensus 242 pl~ll-ggh~gG-vThL~~~edGn~lfsGaRk~dkIl~WDiR~~~ 284 (406)
T KOG2919|consen 242 PLQLL-GGHGGG-VTHLQWCEDGNKLFSGARKDDKILCWDIRYSR 284 (406)
T ss_pred ceeee-cccCCC-eeeEEeccCcCeecccccCCCeEEEEeehhcc
Confidence 88888 467777 999999999999999884 7889999998653
No 206
>KOG2695|consensus
Probab=99.31 E-value=1.8e-11 Score=78.88 Aligned_cols=121 Identities=17% Similarity=0.253 Sum_probs=90.9
Q ss_pred eEEEEec--CCcEEEEeCCCCeEEEEEccCC-----ceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCCce
Q psy11518 16 SVRSVAA--TSKLAASSGADETVVLYDMVKR-----KQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~-----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
.|.+..| .++++..|..+|.|-.+|++.. .+...+ .|.+.|++++... +.++|.+.+.+|+|++||++.-+
T Consensus 254 DVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K 332 (425)
T KOG2695|consen 254 DVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATK 332 (425)
T ss_pred hHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeehhhh
Confidence 4555555 5889999999999999999765 233333 5889999998776 78899999999999999998766
Q ss_pred E---EEEEEeCCC-CcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 88 L---EKLFKKAHK-GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 88 ~---~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
. +..+ ..|. .....-+-.++....++++++|...+||.++.++.+..+.+
T Consensus 333 ~~~~V~qY-eGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghLl~tipf 386 (425)
T KOG2695|consen 333 CKKSVMQY-EGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHLLCTIPF 386 (425)
T ss_pred cccceeee-ecccccccccccccccccceEEEccCeeEEEEEecccCceeeccCC
Confidence 6 4444 2222 11122234456777899999999999999999998877654
No 207
>KOG0650|consensus
Probab=99.31 E-value=8.8e-12 Score=85.13 Aligned_cols=110 Identities=23% Similarity=0.267 Sum_probs=87.4
Q ss_pred eeEEEEecCCcEEEEeCCCCeEEEEEccCC-ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC-------Cc
Q psy11518 15 ASVRSVAATSKLAASSGADETVVLYDMVKR-KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG-------SW 86 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-------~~ 86 (139)
...+++.+.|.-|+.|+.|+.+.++|+.-+ ++..++..|...+..++|++...++++|+.||.+.++.-. +.
T Consensus 610 iS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnp 689 (733)
T KOG0650|consen 610 ISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNP 689 (733)
T ss_pred eeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCC
Confidence 345566678999999999999999999754 6677888899999999999999999999999999988531 11
Q ss_pred e--EEEEEEeCCCC---cceeEEEEccCCcEEEEEcCCCeEEEE
Q psy11518 87 Q--LEKLFKKAHKG---TAVNHISIHPSGKLALSVGKDKTLRTW 125 (139)
Q Consensus 87 ~--~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~~i~i~ 125 (139)
. ++..+ ..|.. ..|.+..|||...+|++++.||.|++|
T Consensus 690 liVPlK~L-~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 690 LIVPLKRL-RGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred ceEeeeec-cCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 1 22222 22211 127788999999999999999999998
No 208
>KOG2139|consensus
Probab=99.29 E-value=1.3e-10 Score=75.44 Aligned_cols=109 Identities=17% Similarity=0.259 Sum_probs=82.2
Q ss_pred eEEEEec---CCcEEEEeCCCCeEEEEEccCC----ce----------eeEEEecCCCeEEEEECCCCCEEEEecC-CCc
Q psy11518 16 SVRSVAA---TSKLAASSGADETVVLYDMVKR----KQ----------SGALMQHEGTITCLKFTPEGSHLISCSD-DGS 77 (139)
Q Consensus 16 ~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~----~~----------~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~ 77 (139)
.+.|++| .+.-+++|+..| |.+|..... +. +...++| ..|++++|.++|..+++++. |..
T Consensus 142 nvtclawRPlsaselavgCr~g-IciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsss 219 (445)
T KOG2139|consen 142 NVTCLAWRPLSASELAVGCRAG-ICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSS 219 (445)
T ss_pred ceeEEEeccCCcceeeeeecce-eEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcce
Confidence 4555555 666788887766 899986421 21 1122345 68999999999999998876 667
Q ss_pred EEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
|.+||..++...... ....++ ++-+.|+||+.+++++..|+..++|+..
T Consensus 220 i~iWdpdtg~~~pL~-~~glgg-~slLkwSPdgd~lfaAt~davfrlw~e~ 268 (445)
T KOG2139|consen 220 IMIWDPDTGQKIPLI-PKGLGG-FSLLKWSPDGDVLFAATCDAVFRLWQEN 268 (445)
T ss_pred EEEEcCCCCCccccc-ccCCCc-eeeEEEcCCCCEEEEecccceeeeehhc
Confidence 999999998877665 333444 8889999999999999999999999554
No 209
>KOG1310|consensus
Probab=99.29 E-value=2.2e-11 Score=82.73 Aligned_cols=82 Identities=23% Similarity=0.462 Sum_probs=74.8
Q ss_pred eeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEcc--CCcEEEEEcCCCeEEE
Q psy11518 47 SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRT 124 (139)
Q Consensus 47 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i 124 (139)
..++.+|++-|+|+.|+.+|.+|++|+.|-.+.+||.-..+++..+..+|... |.++.|-| +.+++++|..|..|++
T Consensus 43 E~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaN-IFsvKFvP~tnnriv~sgAgDk~i~l 121 (758)
T KOG1310|consen 43 EAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTAN-IFSVKFVPYTNNRIVLSGAGDKLIKL 121 (758)
T ss_pred hhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccc-eeEEeeeccCCCeEEEeccCcceEEE
Confidence 45678999999999999999999999999999999999888888887888877 99999999 6678999999999999
Q ss_pred EEcCC
Q psy11518 125 WNLVK 129 (139)
Q Consensus 125 ~d~~~ 129 (139)
||+..
T Consensus 122 fdl~~ 126 (758)
T KOG1310|consen 122 FDLDS 126 (758)
T ss_pred Eeccc
Confidence 99985
No 210
>KOG0974|consensus
Probab=99.27 E-value=1.8e-10 Score=82.65 Aligned_cols=103 Identities=23% Similarity=0.319 Sum_probs=89.0
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCccee
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 102 (139)
+.-++++|+.-+.|.+|++...+....+.+|++.+..+.|+-+|+++++.+.|..+++|++.+.+........|... +.
T Consensus 144 ~~~~i~~gsv~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaR-vw 222 (967)
T KOG0974|consen 144 EELYIASGSVFGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSAR-VW 222 (967)
T ss_pred cEEEEEeccccccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccce-eE
Confidence 56688999999999999987544445688999999999999999999999999999999999988776444566655 99
Q ss_pred EEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 103 HISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 103 ~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
.++|.|+ .++++++|.+.++|+..
T Consensus 223 ~~~~~~n--~i~t~gedctcrvW~~~ 246 (967)
T KOG0974|consen 223 ACCFLPN--RIITVGEDCTCRVWGVN 246 (967)
T ss_pred EEEeccc--eeEEeccceEEEEEecc
Confidence 9999998 89999999999999553
No 211
>KOG0771|consensus
Probab=99.27 E-value=9.1e-11 Score=76.87 Aligned_cols=117 Identities=26% Similarity=0.321 Sum_probs=95.6
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE-------------------------------------
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM------------------------------------- 51 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~------------------------------------- 51 (139)
..|...|.++.| |++.|++-+.| ..+||+.+++.++....
T Consensus 183 ~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~ 261 (398)
T KOG0771|consen 183 IAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLC 261 (398)
T ss_pred HhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEE
Confidence 356677777776 99999999999 89999998762111000
Q ss_pred ----ec-------------CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEE
Q psy11518 52 ----QH-------------EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLAL 114 (139)
Q Consensus 52 ----~~-------------~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 114 (139)
.+ ...|++++.+++|++++.|+.||.|.+++..+.+.....+..|... |+.+.|+|+.+.++
T Consensus 262 ~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~-VT~ltF~Pdsr~~~ 340 (398)
T KOG0771|consen 262 DISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHLGF-VTGLTFSPDSRYLA 340 (398)
T ss_pred EeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhheee-eeeEEEcCCcCccc
Confidence 01 2368999999999999999999999999999999988887777776 99999999999999
Q ss_pred EEcCCCeEEEEEcCC
Q psy11518 115 SVGKDKTLRTWNLVK 129 (139)
Q Consensus 115 ~~~~d~~i~i~d~~~ 129 (139)
+.+.|...++..+.-
T Consensus 341 svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 341 SVSSDNEAAVTKLAV 355 (398)
T ss_pred ccccCCceeEEEEee
Confidence 999998888887654
No 212
>KOG1524|consensus
Probab=99.26 E-value=1.1e-10 Score=79.15 Aligned_cols=104 Identities=21% Similarity=0.227 Sum_probs=83.9
Q ss_pred EEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 6 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
+.++-..|.+-|.++.| ..+++++|++|-..++||. -|+++.+...|+.+|++++|+|+ ..++.++.. .++
T Consensus 178 k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~-~G~~Lf~S~~~ey~ITSva~npd-~~~~v~S~n-t~R---- 250 (737)
T KOG1524|consen 178 KIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDA-QGANLFTSAAEEYAITSVAFNPE-KDYLLWSYN-TAR---- 250 (737)
T ss_pred ceeEEeccCcEEEEeecCccccceeecCCceeEEeecc-cCcccccCChhccceeeeeeccc-cceeeeeee-eee----
Confidence 44556678999999998 7889999999999999994 67888888889999999999999 666666543 222
Q ss_pred CCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEE
Q psy11518 84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125 (139)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 125 (139)
+..+..+. |..++|++||..+++|...|.+.+=
T Consensus 251 --------~~~p~~GS-ifnlsWS~DGTQ~a~gt~~G~v~~A 283 (737)
T KOG1524|consen 251 --------FSSPRVGS-IFNLSWSADGTQATCGTSTGQLIVA 283 (737)
T ss_pred --------ecCCCccc-eEEEEEcCCCceeeccccCceEEEe
Confidence 43455555 9999999999999999998886543
No 213
>KOG0280|consensus
Probab=99.25 E-value=5.6e-10 Score=70.68 Aligned_cols=112 Identities=16% Similarity=0.121 Sum_probs=85.9
Q ss_pred CCcEEEEeCCCCeEEEEEccCCce--eeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeC-CceEEEEEEeCCCC
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQ--SGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVG-SWQLEKLFKKAHKG 98 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~-~~~~~~~~~~~~~~ 98 (139)
.+..++++..+|.+.+-+...... .+..+.|+-+.....|+. +.+.+.+|+.|+.+..||++ .+..++.-...|..
T Consensus 132 ~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~ 211 (339)
T KOG0280|consen 132 SGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTS 211 (339)
T ss_pred cCceEEEEcCCCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeec
Confidence 677789999999998655444433 346788999989889986 56788999999999999999 33444443345666
Q ss_pred cceeEEEEcc-CCcEEEEEcCCCeEEEEEcC-CCceeEE
Q psy11518 99 TAVNHISIHP-SGKLALSVGKDKTLRTWNLV-KGRSAYI 135 (139)
Q Consensus 99 ~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~-~~~~~~~ 135 (139)
+ |.++.-+| .+.++++|+.|-.|++||.| -++++..
T Consensus 212 G-V~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~ 249 (339)
T KOG0280|consen 212 G-VVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFK 249 (339)
T ss_pred c-eEEEecCCCCCceEEEeccccceeeeehhcccCcccc
Confidence 6 88888776 56799999999999999999 4566544
No 214
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.25 E-value=3.7e-11 Score=54.65 Aligned_cols=38 Identities=29% Similarity=0.573 Sum_probs=36.0
Q ss_pred ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
+++.++.+|.+.|.+++|+|+++++++++.|+.|++||
T Consensus 2 ~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 56788999999999999999999999999999999997
No 215
>KOG2321|consensus
Probab=99.24 E-value=2.6e-10 Score=77.89 Aligned_cols=112 Identities=10% Similarity=0.161 Sum_probs=89.7
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCC-----
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHK----- 97 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~----- 97 (139)
...+++.| ....|.=++++.|+.+..+....+.++++..++...++++|+.+|.+..||.+.......+....+
T Consensus 145 scDly~~g-sg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~p 223 (703)
T KOG2321|consen 145 SCDLYLVG-SGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHP 223 (703)
T ss_pred CccEEEee-cCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCc
Confidence 33444444 455677788999999988888888999999999989999999999999999987665544422211
Q ss_pred ----CcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 98 ----GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 98 ----~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
...|+++.|+.+|-.+++|+.+|.+.|||+++.+++..
T Consensus 224 g~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~ 265 (703)
T KOG2321|consen 224 GGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLV 265 (703)
T ss_pred cccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceee
Confidence 12389999999999999999999999999999988754
No 216
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.24 E-value=5.7e-09 Score=70.01 Aligned_cols=131 Identities=10% Similarity=0.157 Sum_probs=89.1
Q ss_pred eeEEEEEeecceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec-CCCcEEEE
Q psy11518 3 TLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIF 81 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~ 81 (139)
+.+.++...+.......+++|++++++++.|+.|.++|+.+.+.+.+++... ....++++++|+++++++ ..+.+.++
T Consensus 27 ~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~-~~~~i~~s~DG~~~~v~n~~~~~v~v~ 105 (369)
T PF02239_consen 27 KVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG-NPRGIAVSPDGKYVYVANYEPGTVSVI 105 (369)
T ss_dssp SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS-EEEEEEE--TTTEEEEEEEETTEEEEE
T ss_pred eEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC-CcceEEEcCCCCEEEEEecCCCceeEe
Confidence 4556666543332223455689999999999999999999999998887544 457899999999998665 58899999
Q ss_pred EeCCceEEEEEEeCC-----CCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCCceeE
Q psy11518 82 RVGSWQLEKLFKKAH-----KGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 82 d~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
|.++.+.+..+.... ...++..+-.+|... ++++.-+.+.|.+.|..+.+.+.
T Consensus 106 D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~ 164 (369)
T PF02239_consen 106 DAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLK 164 (369)
T ss_dssp ETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEE
T ss_pred ccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccc
Confidence 999999888774332 223477787788777 55566667899999988765543
No 217
>KOG4227|consensus
Probab=99.23 E-value=4e-10 Score=74.15 Aligned_cols=123 Identities=15% Similarity=0.178 Sum_probs=99.1
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEe--cCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQ--HEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
..+.|...|.|+.| ...++++|+.+++|..-|+++.+.+..+.. ..+.|..+..+|..+.+++.+.++.|.+||.+
T Consensus 100 ~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~R 179 (609)
T KOG4227|consen 100 MEHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNR 179 (609)
T ss_pred ccCccccceEEEEEccCCeeEecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEecc
Confidence 34557789999999 677899999999999999999988877753 23589999999999999999999999999998
Q ss_pred Cce-EEEEEEeCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCCc
Q psy11518 85 SWQ-LEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 85 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~ 131 (139)
..+ ....+-....+.....+.|+|... +|++.++.+-+.+||.+..+
T Consensus 180 d~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~~~~G~~~~D~R~~~ 228 (609)
T KOG4227|consen 180 DRQNPISLVLPANSGKNFYTAEFHPETPALILVNSETGGPNVFDRRMQA 228 (609)
T ss_pred CCCCCCceeeecCCCccceeeeecCCCceeEEeccccCCCCceeecccc
Confidence 766 444443444444478899999665 77788888889999998643
No 218
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.20 E-value=7e-09 Score=68.66 Aligned_cols=110 Identities=15% Similarity=0.252 Sum_probs=75.1
Q ss_pred EEEecCCcEEEEeC-CCCeEEEEEccCCc----eeeEEEecCCCeEEEEECCCCCEEE-EecCCCcEEEEEeCCceEEE-
Q psy11518 18 RSVAATSKLAASSG-ADETVVLYDMVKRK----QSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEK- 90 (139)
Q Consensus 18 ~~~~~~~~~l~~~~-~~~~v~i~~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~- 90 (139)
..+.++++++++++ .++.|.+|++++.. .+..+. +......++++|++++++ +...++.|.+||+.+...+.
T Consensus 85 i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~ 163 (330)
T PRK11028 85 ISTDHQGRFLFSASYNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVA 163 (330)
T ss_pred EEECCCCCEEEEEEcCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccc
Confidence 33445788877765 48899999986432 222222 223457788999998885 55567899999997633221
Q ss_pred ----EEEeCCCCcceeEEEEccCCcEEEEEcC-CCeEEEEEcCC
Q psy11518 91 ----LFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVK 129 (139)
Q Consensus 91 ----~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~d~~~ 129 (139)
.... ..+..+..++|+|++++++++.+ ++.|.+|++..
T Consensus 164 ~~~~~~~~-~~g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~ 206 (330)
T PRK11028 164 QEPAEVTT-VEGAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKD 206 (330)
T ss_pred cCCCceec-CCCCCCceEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence 1111 12223678999999999988876 89999999973
No 219
>KOG1517|consensus
Probab=99.20 E-value=7.3e-10 Score=80.40 Aligned_cols=115 Identities=23% Similarity=0.339 Sum_probs=88.7
Q ss_pred eeeEEEEec---CCcEEEEeCCCCeEEEEEccCC---ceeeEEEecCCC--eEEEEECCCCCE-EEEecCCCcEEEEEeC
Q psy11518 14 TASVRSVAA---TSKLAASSGADETVVLYDMVKR---KQSGALMQHEGT--ITCLKFTPEGSH-LISCSDDGSIAIFRVG 84 (139)
Q Consensus 14 ~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~--v~~~~~~~~~~~-l~~~~~d~~i~~~d~~ 84 (139)
...+++++. .|+.+++|-.||+|++||.+.. ..+...+.|... |..+.+.++|-. +++|+.+|.|.+||++
T Consensus 1208 ~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR 1287 (1387)
T KOG1517|consen 1208 STLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLR 1287 (1387)
T ss_pred CccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecc
Confidence 344566665 6899999999999999998654 345667778777 999999886654 9999999999999998
Q ss_pred CceEEEEEE-eCCC--CcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 85 SWQLEKLFK-KAHK--GTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 85 ~~~~~~~~~-~~~~--~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
.......+. ..+. ++..+++..|++...+++|+. +.|.||++..
T Consensus 1288 ~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~ikIy~~~G 1334 (1387)
T KOG1517|consen 1288 MSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLIKIYSLSG 1334 (1387)
T ss_pred cCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceEEEEecCh
Confidence 743222111 1222 334899999999999999998 8999999864
No 220
>KOG4547|consensus
Probab=99.20 E-value=2.1e-09 Score=73.31 Aligned_cols=111 Identities=14% Similarity=0.247 Sum_probs=96.1
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEE--ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcc
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA 100 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 100 (139)
+...++-|...|.|.+|+...++....+. .|.+.|.++.++.+-..+.+++.|+++..|+......+... ......
T Consensus 69 ~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~-~~~~~~- 146 (541)
T KOG4547|consen 69 DTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIW-KEQKPL- 146 (541)
T ss_pred CceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeee-ccCCCc-
Confidence 44468889999999999999998887776 58999999999999999999999999999999999888888 444444
Q ss_pred eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+.+++.+||+..+++++ +.|.+||+++++.+..+.
T Consensus 147 ~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ft 181 (541)
T KOG4547|consen 147 VSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFT 181 (541)
T ss_pred cceEEEcCCCCEEEecc--ceEEEEEccCceEEEEec
Confidence 89999999999999887 579999999998877653
No 221
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.18 E-value=7.8e-09 Score=68.43 Aligned_cols=112 Identities=12% Similarity=0.113 Sum_probs=75.1
Q ss_pred EEEEecCCcEEEEe-CCCCeEEEEEccC-Cce--eeEEEecCCCeEEEEECCCCCEEEEecC-CCcEEEEEeCCc-eEEE
Q psy11518 17 VRSVAATSKLAASS-GADETVVLYDMVK-RKQ--SGALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSW-QLEK 90 (139)
Q Consensus 17 v~~~~~~~~~l~~~-~~~~~v~i~~~~~-~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~-~~~~ 90 (139)
.+.+++++++|+++ ..++.|.+|++.. ++. +.... .......++++|+++++++++. ++.|.+|++.+. ....
T Consensus 39 ~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~ 117 (330)
T PRK11028 39 PMVISPDKRHLYVGVRPEFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVA 117 (330)
T ss_pred cEEECCCCCEEEEEECCCCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCC
Confidence 34666788888665 4578899999863 332 12221 2334578999999998877654 888999999642 2211
Q ss_pred EEE-eCCCCcceeEEEEccCCcEEEEEc-CCCeEEEEEcCCC
Q psy11518 91 LFK-KAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKG 130 (139)
Q Consensus 91 ~~~-~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~ 130 (139)
... ..+... +..++++|+++++++++ .++.|.+||+.+.
T Consensus 118 ~~~~~~~~~~-~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~ 158 (330)
T PRK11028 118 PIQIIEGLEG-CHSANIDPDNRTLWVPCLKEDRIRLFTLSDD 158 (330)
T ss_pred ceeeccCCCc-ccEeEeCCCCCEEEEeeCCCCEEEEEEECCC
Confidence 111 122222 67789999999886555 5799999999763
No 222
>KOG0280|consensus
Probab=99.17 E-value=3.4e-10 Score=71.61 Aligned_cols=97 Identities=15% Similarity=0.125 Sum_probs=71.9
Q ss_pred cceeeEEEEec---CCcEEEEeCCCCeEEEEEcc-CCceeeE-EEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCC
Q psy11518 12 SHTASVRSVAA---TSKLAASSGADETVVLYDMV-KRKQSGA-LMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 12 ~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~-~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~ 85 (139)
+|...+.-..| +.+.+.+|+.|+.++.||++ .++.+.. .+.|...|.++.-+| .+.++++|+.|..|++||.++
T Consensus 163 ~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRn 242 (339)
T KOG0280|consen 163 VHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRN 242 (339)
T ss_pred ccceeeeeeecccCCCceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeeehhc
Confidence 34444444444 77899999999999999998 3344433 567889999998876 688999999999999999985
Q ss_pred -ceEEEEEEeCCCCcceeEEEEccCCc
Q psy11518 86 -WQLEKLFKKAHKGTAVNHISIHPSGK 111 (139)
Q Consensus 86 -~~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (139)
++++... ...++ |+.+.++|.-.
T Consensus 243 m~kPl~~~--~v~GG-VWRi~~~p~~~ 266 (339)
T KOG0280|consen 243 MGKPLFKA--KVGGG-VWRIKHHPEIF 266 (339)
T ss_pred ccCccccC--ccccc-eEEEEecchhh
Confidence 3444433 22344 99999998443
No 223
>KOG4547|consensus
Probab=99.15 E-value=3.8e-09 Score=72.07 Aligned_cols=123 Identities=21% Similarity=0.320 Sum_probs=102.1
Q ss_pred eeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy11518 3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
++...+...+|.+.+.++.+ +-..|.+++.|..+..|++...+.+...+.....+.+++.+|++..+++++ ++|++
T Consensus 91 ~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~~l~~as--~~ik~ 168 (541)
T KOG4547|consen 91 EITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGKILLTAS--RQIKV 168 (541)
T ss_pred eEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCCEEEecc--ceEEE
Confidence 45567777889999999987 666899999999999999999999999998889999999999999999887 47999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccC-----CcEEEEE-cCCCeEEEEEcCC
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPS-----GKLALSV-GKDKTLRTWNLVK 129 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~-~~d~~i~i~d~~~ 129 (139)
||+.+.+....+ .+|. .+|++++|..+ |.+++++ ..++-+.+|=.+.
T Consensus 169 ~~~~~kevv~~f-tgh~-s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 169 LDIETKEVVITF-TGHG-SPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred EEccCceEEEEe-cCCC-cceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 999999998888 4544 45999999887 6666554 4566677886554
No 224
>KOG0290|consensus
Probab=99.15 E-value=1.8e-09 Score=68.49 Aligned_cols=118 Identities=19% Similarity=0.235 Sum_probs=83.2
Q ss_pred cceeeEEEEec--CC-----cEEEEeCCCCeEEEEEccCCcee----eEE-----EecCCCeEEEEECC-CCCEEEEecC
Q psy11518 12 SHTASVRSVAA--TS-----KLAASSGADETVVLYDMVKRKQS----GAL-----MQHEGTITCLKFTP-EGSHLISCSD 74 (139)
Q Consensus 12 ~~~~~v~~~~~--~~-----~~l~~~~~~~~v~i~~~~~~~~~----~~~-----~~~~~~v~~~~~~~-~~~~l~~~~~ 74 (139)
.|..+++.+.| +. .+||+. +..+++|.+...+.. ..+ ..+.+++++..|+. +.+++.+++-
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs--~D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSi 171 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATS--SDFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSI 171 (364)
T ss_pred CCCCCccceEecCCccccCcchhhcc--cCeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecc
Confidence 35556666665 22 234443 467999998742211 111 23567899999987 7889999999
Q ss_pred CCcEEEEEeCCceE--EEEEEeCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCCce
Q psy11518 75 DGSIAIFRVGSWQL--EKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 75 d~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~ 132 (139)
|-+..+||+.++.. ..+.-..|... |..++|...+. .+++.|.||.+|+||+|....
T Consensus 172 DTTCTiWdie~~~~~~vkTQLIAHDKE-V~DIaf~~~s~~~FASvgaDGSvRmFDLR~leH 231 (364)
T KOG0290|consen 172 DTTCTIWDIETGVSGTVKTQLIAHDKE-VYDIAFLKGSRDVFASVGADGSVRMFDLRSLEH 231 (364)
T ss_pred cCeEEEEEEeeccccceeeEEEecCcc-eeEEEeccCccceEEEecCCCcEEEEEeccccc
Confidence 99999999998733 22221455554 99999998554 789999999999999997644
No 225
>KOG1538|consensus
Probab=99.14 E-value=3.3e-09 Score=74.11 Aligned_cols=118 Identities=22% Similarity=0.282 Sum_probs=86.0
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCc--------eeeEE---------------------------Eec
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--------QSGAL---------------------------MQH 53 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~--------~~~~~---------------------------~~~ 53 (139)
.+|...|.|+++ +|+.+++|+.|..|.+|+.+-.- .++.. ..|
T Consensus 50 KgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK~V~K~ 129 (1081)
T KOG1538|consen 50 KGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQKSVSKH 129 (1081)
T ss_pred ccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhhhHHhh
Confidence 478888999988 99999999999999999975321 11100 011
Q ss_pred --CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCC-----cEEEEEcCCCeEEEEE
Q psy11518 54 --EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG-----KLALSVGKDKTLRTWN 126 (139)
Q Consensus 54 --~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~-----~~l~~~~~d~~i~i~d 126 (139)
...+.+++|..||++++.|-.+|+|.+-+-..-+....-..+....+|.+++|+|+. ..+++.....++.+|.
T Consensus 130 kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qTLSFy~ 209 (1081)
T KOG1538|consen 130 KSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQTLSFYQ 209 (1081)
T ss_pred hhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccceeEEEE
Confidence 246788999999999999999999999875433333333234445569999999943 4677888888888887
Q ss_pred cC
Q psy11518 127 LV 128 (139)
Q Consensus 127 ~~ 128 (139)
+.
T Consensus 210 Ls 211 (1081)
T KOG1538|consen 210 LS 211 (1081)
T ss_pred ec
Confidence 74
No 226
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.13 E-value=1.9e-08 Score=69.04 Aligned_cols=116 Identities=16% Similarity=0.186 Sum_probs=79.0
Q ss_pred eeeEEEEe--cCCcEEEEeC---CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCc--EEEEEeCC
Q psy11518 14 TASVRSVA--ATSKLAASSG---ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGS--IAIFRVGS 85 (139)
Q Consensus 14 ~~~v~~~~--~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~~~d~~~ 85 (139)
...+.+.. +||+.|+..+ .+..|.+||+.+++.. .+..+.+.+...+|+|+|+.++ +.+.++. |.+||+.+
T Consensus 201 ~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~-~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~ 279 (435)
T PRK05137 201 SSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE-LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRS 279 (435)
T ss_pred CCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE-EeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCC
Confidence 33454444 4888877654 3468999999887653 3445566677889999998775 5555555 77778887
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcC-C--CeEEEEEcCCCcee
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-D--KTLRTWNLVKGRSA 133 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d--~~i~i~d~~~~~~~ 133 (139)
+...... .+... ....+|+|||+.++..+. + ..|.++|+..++..
T Consensus 280 ~~~~~Lt--~~~~~-~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~~ 327 (435)
T PRK05137 280 GTTTRLT--DSPAI-DTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNPR 327 (435)
T ss_pred CceEEcc--CCCCc-cCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCeE
Confidence 7654433 22222 567899999998887663 2 36888898766543
No 227
>KOG3881|consensus
Probab=99.11 E-value=2.5e-09 Score=69.93 Aligned_cols=111 Identities=14% Similarity=0.212 Sum_probs=87.1
Q ss_pred CCcEEEEeCCC--CeEEEEEccCCceeeEEEe---------cCCCeEEEEECCC--CCEEEEecCCCcEEEEEeCCceE-
Q psy11518 23 TSKLAASSGAD--ETVVLYDMVKRKQSGALMQ---------HEGTITCLKFTPE--GSHLISCSDDGSIAIFRVGSWQL- 88 (139)
Q Consensus 23 ~~~~l~~~~~~--~~v~i~~~~~~~~~~~~~~---------~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~~~~~- 88 (139)
...++++|+.. ..+.+||++..+++..-+- -.-.++.+.|.+. ...|+++..-+++++||.+.++.
T Consensus 160 ~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRP 239 (412)
T KOG3881|consen 160 DPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRP 239 (412)
T ss_pred CCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcc
Confidence 45567779988 8999999988866554331 1223577889887 78899999999999999986653
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
...+ .....+++++...|+++++++|...+.+..||++.++....
T Consensus 240 V~~f--d~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~ 284 (412)
T KOG3881|consen 240 VAQF--DFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGC 284 (412)
T ss_pred eeEe--ccccCcceeeeecCCCcEEEEecccchhheecccCceeecc
Confidence 3333 33444599999999999999999999999999999887654
No 228
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=99.09 E-value=5.6e-08 Score=66.85 Aligned_cols=76 Identities=17% Similarity=0.257 Sum_probs=63.1
Q ss_pred ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
...+.+.+++++|+...++.|+.||.|.+||...+.....- . .-.+..++|||+|..+++|++.|.+.+||+.-+.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~k--a--~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLAK--A--EFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP 332 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeeee--e--cccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence 36778999999999999999999999999998776443331 1 2227889999999999999999999999987543
No 229
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.08 E-value=1.5e-09 Score=49.25 Aligned_cols=38 Identities=29% Similarity=0.632 Sum_probs=32.3
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
++...+ ..|... |.+++|+|++.++++++.|+.|++||
T Consensus 2 ~~~~~~-~~h~~~-i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTF-RGHSSS-INSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEE-ESSSSS-EEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred eEEEEE-cCCCCc-EEEEEEecccccceeeCCCCEEEEEC
Confidence 445555 556655 99999999999999999999999997
No 230
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.07 E-value=1.1e-08 Score=70.07 Aligned_cols=107 Identities=18% Similarity=0.250 Sum_probs=70.0
Q ss_pred EEecCCcEEEEeCC---CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEe-cCCCcEEEE--EeCCceEEEEE
Q psy11518 19 SVAATSKLAASSGA---DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIF--RVGSWQLEKLF 92 (139)
Q Consensus 19 ~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~--d~~~~~~~~~~ 92 (139)
.++++|+.++..+. +..|.+||+.+++.... ....+.....+|+|+|+.++.+ +.+|.+.+| |+.++......
T Consensus 210 ~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l-~~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~~~lt 288 (429)
T PRK01742 210 AWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVV-ASFRGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTPSQLT 288 (429)
T ss_pred eEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEE-ecCCCccCceeECCCCCEEEEEEecCCcEEEEEEECCCCCeEeec
Confidence 44458988887653 34799999988754221 2122233468999999988765 467766555 66555543332
Q ss_pred EeCCCCcceeEEEEccCCcEEEEEc-CCCeEEEEEcCC
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVK 129 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~ 129 (139)
.+... +...+|+|||+.++..+ .++...||++..
T Consensus 289 --~~~~~-~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~ 323 (429)
T PRK01742 289 --SGAGN-NTEPSWSPDGQSILFTSDRSGSPQVYRMSA 323 (429)
T ss_pred --cCCCC-cCCEEECCCCCEEEEEECCCCCceEEEEEC
Confidence 23333 77899999999777554 567788887643
No 231
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.07 E-value=5.9e-08 Score=66.55 Aligned_cols=111 Identities=13% Similarity=0.159 Sum_probs=73.0
Q ss_pred EEEecCCcEEEEeC---CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEe-cCCC--cEEEEEeCCceEEEE
Q psy11518 18 RSVAATSKLAASSG---ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC-SDDG--SIAIFRVGSWQLEKL 91 (139)
Q Consensus 18 ~~~~~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~--~i~~~d~~~~~~~~~ 91 (139)
..+++||+.|+..+ .+..|.+|++.+++.... ......+....|+|+|+.|+.. +.++ .|.+||+.++.....
T Consensus 204 p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l-~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~l 282 (429)
T PRK03629 204 PAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQV 282 (429)
T ss_pred eEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEc-cCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEEc
Confidence 34455898887543 345799999988754322 2223334568999999988744 4454 488999988766544
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcCC-C--eEEEEEcCCCce
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGKD-K--TLRTWNLVKGRS 132 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~--~i~i~d~~~~~~ 132 (139)
. .... .+....|+|||+.|+..+.+ + .|..+|+.+++.
T Consensus 283 t--~~~~-~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~ 323 (429)
T PRK03629 283 T--DGRS-NNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP 323 (429)
T ss_pred c--CCCC-CcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe
Confidence 3 2222 26789999999988776653 3 455557766644
No 232
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.06 E-value=6.6e-08 Score=65.39 Aligned_cols=110 Identities=13% Similarity=0.261 Sum_probs=89.1
Q ss_pred CCcEEEEeCCCC-eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcce
Q psy11518 23 TSKLAASSGADE-TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV 101 (139)
Q Consensus 23 ~~~~l~~~~~~~-~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v 101 (139)
+++.++.|..|| .+-+||..+++. ..+...-+.|.++..+|+|++++.+.....|.+.|+.++.....- ....+- |
T Consensus 370 ~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~id-kS~~~l-I 446 (668)
T COG4946 370 DPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLID-KSEYGL-I 446 (668)
T ss_pred CCcceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEec-ccccce-e
Confidence 677889999998 999999887764 344445678999999999999999999999999999998765433 334444 9
Q ss_pred eEEEEccCCcEEEEEcCC----CeEEEEEcCCCceeEE
Q psy11518 102 NHISIHPSGKLALSVGKD----KTLRTWNLVKGRSAYI 135 (139)
Q Consensus 102 ~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~ 135 (139)
...+|||++++++-+--+ ..|+++|+..++....
T Consensus 447 tdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~v 484 (668)
T COG4946 447 TDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDV 484 (668)
T ss_pred EEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEe
Confidence 999999999999988654 4699999998877654
No 233
>KOG1587|consensus
Probab=99.06 E-value=2.4e-09 Score=74.56 Aligned_cols=117 Identities=13% Similarity=0.116 Sum_probs=83.8
Q ss_pred eEEEEec---CCcEEEEeCCCCeEEEEEccCC--------ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 16 SVRSVAA---TSKLAASSGADETVVLYDMVKR--------KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 16 ~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
.++++.| +...+++|+..|.|.--+-... +....+..|.+.|.++.++|=+..++..+.|..+++|...
T Consensus 349 ~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~k~fls~gDW~vriWs~~ 428 (555)
T KOG1587|consen 349 GATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPVYAVSRNPFYPKNFLSVGDWTVRIWSED 428 (555)
T ss_pred ceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcceEeeecCCCccceeeeeccceeEecccc
Confidence 4556665 7788999999999887332222 2233556789999999999966555544449999999987
Q ss_pred -CceEEEEEEeCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCCceeE
Q psy11518 85 -SWQLEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 85 -~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
...++..+ ..+... +.+++|+|... .++++..||.+.+||+......+
T Consensus 429 ~~~~Pl~~~-~~~~~~-v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~~~P 478 (555)
T KOG1587|consen 429 VIASPLLSL-DSSPDY-VTDVAWSPTRPAVFATVDGDGNLDIWDLLQDDEEP 478 (555)
T ss_pred CCCCcchhh-hhccce-eeeeEEcCcCceEEEEEcCCCceehhhhhccccCC
Confidence 44455444 233333 99999999765 67778889999999998765443
No 234
>KOG2041|consensus
Probab=99.05 E-value=2.3e-09 Score=75.42 Aligned_cols=116 Identities=13% Similarity=0.146 Sum_probs=94.8
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCc---------------eeeEEEecCCCeEEEEECCCCCEEEEecCC
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRK---------------QSGALMQHEGTITCLKFTPEGSHLISCSDD 75 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~---------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 75 (139)
......|++| +..++++|+.||.+++..+.+.. .-+++.+|.+.|..+.|+.+.+.|.+...+
T Consensus 13 nnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTtSDt~ 92 (1189)
T KOG2041|consen 13 NNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTTSDTS 92 (1189)
T ss_pred CCceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccccCCC
Confidence 4566778888 78899999999999999875421 124567999999999999999999999999
Q ss_pred CcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 76 ~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
|.|.+|-+.++.....+....+.+.|.+++|+.+|..+...-+||.|.+=.+.
T Consensus 93 GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd 145 (1189)
T KOG2041|consen 93 GLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD 145 (1189)
T ss_pred ceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec
Confidence 99999999988876655455555559999999999999998888888665443
No 235
>KOG1409|consensus
Probab=99.04 E-value=2.6e-09 Score=69.04 Aligned_cols=77 Identities=26% Similarity=0.490 Sum_probs=65.3
Q ss_pred EEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCce-eeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ-SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
....+|...+.+..| ....+.+|..|..+.+||+...+- ..++.+|...|..+++.+..+.+.+++.||.|.+|+.+
T Consensus 191 ~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 191 TTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred EEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 345578889999988 566889999999999999866543 46778999999999998888999999999999999874
No 236
>KOG1517|consensus
Probab=99.03 E-value=8.6e-09 Score=75.09 Aligned_cols=107 Identities=16% Similarity=0.223 Sum_probs=78.2
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEe-cCCCeEEEEEC-CCCCEEEEecCCCcEEEEEeCCceE---EEEEEeCCC
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQ-HEGTITCLKFT-PEGSHLISCSDDGSIAIFRVGSWQL---EKLFKKAHK 97 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-~~~~v~~~~~~-~~~~~l~~~~~d~~i~~~d~~~~~~---~~~~~~~~~ 97 (139)
...+|++++.-..|+|||.........+.. ....+++++-+ +.|+.++.|..||.|++||.+-... +..+ ..|.
T Consensus 1176 ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~-R~h~ 1254 (1387)
T KOG1517|consen 1176 QSGHLLVTGDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVY-REHN 1254 (1387)
T ss_pred hCCeEEecCCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceee-cccC
Confidence 444555566689999999988777666553 34456666544 3679999999999999999875433 3333 2333
Q ss_pred -CcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCC
Q psy11518 98 -GTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 98 -~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 130 (139)
..+|..+.+.++|- .+++|+.+|.|.+||+|..
T Consensus 1255 ~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~ 1289 (1387)
T KOG1517|consen 1255 DVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMS 1289 (1387)
T ss_pred CcccceeEEeecCCCcceeeeccCCeEEEEecccC
Confidence 22388899988775 4999999999999999984
No 237
>KOG1963|consensus
Probab=99.02 E-value=1.6e-08 Score=71.81 Aligned_cols=126 Identities=15% Similarity=0.253 Sum_probs=99.7
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
=|...|++++| +|.+|++|+..+.+.+|...+++ ..-++.-.++|..+.++|++.+.+....|..|.+....+....
T Consensus 249 WH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k 327 (792)
T KOG1963|consen 249 WHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIK 327 (792)
T ss_pred ecccccceeEEecCCceEeecccceEEEEEeecCCC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhh
Confidence 35667788777 99999999999999999999988 5556667789999999999999999999999999887554433
Q ss_pred EEEE---eC------CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 90 KLFK---KA------HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 90 ~~~~---~~------~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
..+. .. ....-.+.++++|..+.++-.+..+.|.+||+-+.+.+..+.+
T Consensus 328 ~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v 385 (792)
T KOG1963|consen 328 STISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQV 385 (792)
T ss_pred hhccCccCCCccccccccccceeEEEcCCCCceeecCCCceEEEEeccccceeeeEEE
Confidence 3221 11 0111156789999888888999999999999999888876653
No 238
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.01 E-value=1.4e-08 Score=69.60 Aligned_cols=96 Identities=16% Similarity=0.171 Sum_probs=67.9
Q ss_pred CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCC---CcEEEEEeCCceEEEEEEeCCCCcceeEEEEccC
Q psy11518 33 DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS 109 (139)
Q Consensus 33 ~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 109 (139)
+..|.+||..... ...+..+...+...+|+|+|+.++..+.+ ..|.+||+.+++...... ..+. ....+|+||
T Consensus 183 ~~~i~i~d~dg~~-~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~--~~g~-~~~~~wSPD 258 (429)
T PRK01742 183 PYEVRVADYDGFN-QFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVAS--FRGH-NGAPAFSPD 258 (429)
T ss_pred eEEEEEECCCCCC-ceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEec--CCCc-cCceeECCC
Confidence 4689999986544 45566777889999999999999876543 369999998876433321 1222 446899999
Q ss_pred CcEEEEEc-CCCeEEEE--EcCCCce
Q psy11518 110 GKLALSVG-KDKTLRTW--NLVKGRS 132 (139)
Q Consensus 110 ~~~l~~~~-~d~~i~i~--d~~~~~~ 132 (139)
|+.|+.+. .+|.+.|| |+.+++.
T Consensus 259 G~~La~~~~~~g~~~Iy~~d~~~~~~ 284 (429)
T PRK01742 259 GSRLAFASSKDGVLNIYVMGANGGTP 284 (429)
T ss_pred CCEEEEEEecCCcEEEEEEECCCCCe
Confidence 99888764 57765554 6666554
No 239
>KOG4190|consensus
Probab=98.99 E-value=1.5e-09 Score=74.53 Aligned_cols=134 Identities=17% Similarity=0.193 Sum_probs=95.6
Q ss_pred eeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccC-------CceeeEEEecCCCeEEEEECCCCCEEEEec
Q psy11518 3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVK-------RKQSGALMQHEGTITCLKFTPEGSHLISCS 73 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 73 (139)
+.++-..+.||...|..+.. +.+.+++++.|.+|++|.++. ..+..+++.|+.+|..+.|..+-++++++
T Consensus 724 ~~irL~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~Sc- 802 (1034)
T KOG4190|consen 724 DHIRLCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASC- 802 (1034)
T ss_pred ceeeeecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeec-
Confidence 34444455678888877775 778899999999999999864 24667788999999999999888777655
Q ss_pred CCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEcc--CCcEEEEE-cCCCeEEEEEcCCCceeEEEec
Q psy11518 74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP--SGKLALSV-GKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 74 ~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
||-|++||.--+.++..+....+.+.+..+..-+ +...++.+ +...+++++|.+.+.....+.+
T Consensus 803 -D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kV 869 (1034)
T KOG4190|consen 803 -DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKV 869 (1034)
T ss_pred -cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEe
Confidence 7889999987777665443332222234344444 34444444 5788999999999887765543
No 240
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.98 E-value=2.3e-07 Score=61.65 Aligned_cols=114 Identities=11% Similarity=0.012 Sum_probs=86.4
Q ss_pred CCcEEEEeCCC-----CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC----------CCcEEEEEeCCce
Q psy11518 23 TSKLAASSGAD-----ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD----------DGSIAIFRVGSWQ 87 (139)
Q Consensus 23 ~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----------d~~i~~~d~~~~~ 87 (139)
++..+++-... +.|.+.|..+.+.+.++..-..+- .+ ++|+++.++.+.. +..|.+||..+.+
T Consensus 11 ~~~~v~V~d~~~~~~~~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~ 88 (352)
T TIGR02658 11 DARRVYVLDPGHFAATTQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHL 88 (352)
T ss_pred CCCEEEEECCcccccCceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCc
Confidence 55555544443 899999999999888887544332 34 9999998875544 7789999999999
Q ss_pred EEEEEEeCCC-----CcceeEEEEccCCcEEEEEc-C-CCeEEEEEcCCCceeEEEec
Q psy11518 88 LEKLFKKAHK-----GTAVNHISIHPSGKLALSVG-K-DKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 88 ~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~-~-d~~i~i~d~~~~~~~~~~~~ 138 (139)
....+..+.. ......++++|||+++++.. . +..|.+.|+.+++.+..+.+
T Consensus 89 ~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v 146 (352)
T TIGR02658 89 PIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV 146 (352)
T ss_pred EEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC
Confidence 9988854322 22245789999999998776 3 78999999999999887653
No 241
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.98 E-value=9e-08 Score=65.74 Aligned_cols=114 Identities=22% Similarity=0.288 Sum_probs=75.2
Q ss_pred eEEEEe--cCCcEEEEeCC---CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCC--cEEEEEeCCce
Q psy11518 16 SVRSVA--ATSKLAASSGA---DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDG--SIAIFRVGSWQ 87 (139)
Q Consensus 16 ~v~~~~--~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~--~i~~~d~~~~~ 87 (139)
.+.... ++++.|+..+. +..|.+||+.+++... +....+.....+|+|+|+.++ +.+.++ .|.+||+.+++
T Consensus 205 ~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~-l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~ 283 (433)
T PRK04922 205 PILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL-VASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQ 283 (433)
T ss_pred ccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE-eccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCC
Confidence 344444 48888886653 3479999998776532 333344456789999998775 445555 59999998877
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcC-CC--eEEEEEcCCCcee
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGK-DK--TLRTWNLVKGRSA 133 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~i~d~~~~~~~ 133 (139)
..... .+... ....+|+|||++++..+. ++ .|.++|+.+++..
T Consensus 284 ~~~lt--~~~~~-~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~ 329 (433)
T PRK04922 284 LTRLT--NHFGI-DTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE 329 (433)
T ss_pred eEECc--cCCCC-ccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE
Confidence 54433 22222 467899999998887654 34 4777777766543
No 242
>KOG2315|consensus
Probab=98.97 E-value=2.3e-08 Score=68.23 Aligned_cols=114 Identities=19% Similarity=0.316 Sum_probs=81.7
Q ss_pred eeeEEEEec--CCcEEEE--eCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC---CCcEEEEEeCCc
Q psy11518 14 TASVRSVAA--TSKLAAS--SGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD---DGSIAIFRVGSW 86 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l~~--~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~ 86 (139)
.++|.++.| ++.-+++ |-.-..+.|||+ .+.++..+. +++-+++-|+|.|++++.++. .|.+.+||..+.
T Consensus 270 ~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnl-r~~~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~ 346 (566)
T KOG2315|consen 270 EGPVHDVTWSPSGREFAVVYGFMPAKVTIFNL-RGKPVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNR 346 (566)
T ss_pred CCCceEEEECCCCCEEEEEEecccceEEEEcC-CCCEeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccch
Confidence 567777777 5544433 334567888886 455565554 456689999999999987765 578999999997
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEcC------CCeEEEEEcCCCceeEE
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~ 135 (139)
+.+..+.... -+-..|+|||+++++++. |+.++||+. +|..++.
T Consensus 347 K~i~~~~a~~----tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~~ 396 (566)
T KOG2315|consen 347 KLIAKFKAAN----TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY-TGSLLHE 396 (566)
T ss_pred hhccccccCC----ceEEEEcCCCcEEEEEeccccEEecCCeEEEEe-cCceeeh
Confidence 7777762222 355899999999999874 778999998 4555443
No 243
>PRK04922 tolB translocation protein TolB; Provisional
Probab=98.93 E-value=2e-07 Score=64.08 Aligned_cols=111 Identities=21% Similarity=0.229 Sum_probs=73.6
Q ss_pred EEecCCcEEE-EeCCCC--eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec-CCCc--EEEEEeCCceEEEEE
Q psy11518 19 SVAATSKLAA-SSGADE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS-DDGS--IAIFRVGSWQLEKLF 92 (139)
Q Consensus 19 ~~~~~~~~l~-~~~~~~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~--i~~~d~~~~~~~~~~ 92 (139)
.++++|+.++ +.+.++ .|.+||+.+++. ..+..+.......+|+|+++.++..+ .++. |.++|+.+++.....
T Consensus 254 ~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~~lt 332 (433)
T PRK04922 254 SFSPDGRRLALTLSRDGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAERLT 332 (433)
T ss_pred eECCCCCEEEEEEeCCCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeEEee
Confidence 4555888765 444444 699999987764 34444554556789999999887554 4444 666677666544333
Q ss_pred EeCCCCcceeEEEEccCCcEEEEEcCC---CeEEEEEcCCCcee
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSVGKD---KTLRTWNLVKGRSA 133 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~ 133 (139)
.. ... ....+|+|+|++++..+.+ ..|.+||+.+++..
T Consensus 333 -~~-g~~-~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~ 373 (433)
T PRK04922 333 -FQ-GNY-NARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR 373 (433)
T ss_pred -cC-CCC-ccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE
Confidence 11 122 4568999999998876533 36999999887654
No 244
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.93 E-value=1.5e-07 Score=64.50 Aligned_cols=109 Identities=16% Similarity=0.246 Sum_probs=69.4
Q ss_pred EEecCCcEEEEeCC---CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCcEEEEEe--CCceEEEEE
Q psy11518 19 SVAATSKLAASSGA---DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRV--GSWQLEKLF 92 (139)
Q Consensus 19 ~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~--~~~~~~~~~ 92 (139)
.++++|+.++..+. ...|.+||+.+++... +....+.+...+|+|+++.++ +.+.++...+|.+ ..+.. ..+
T Consensus 202 ~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~l 279 (427)
T PRK02889 202 AWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSGL-RRL 279 (427)
T ss_pred eEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCCc-EEC
Confidence 44458888876553 3469999998886543 333344567889999999886 5677887666654 44443 333
Q ss_pred EeCCCCcceeEEEEccCCcEEEEEcC-CCeEEEEE--cCCCc
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWN--LVKGR 131 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~d--~~~~~ 131 (139)
..+... .....|+|||+.++..+. ++...+|. +.+++
T Consensus 280 -t~~~~~-~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~ 319 (427)
T PRK02889 280 -TQSSGI-DTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA 319 (427)
T ss_pred -CCCCCC-CcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc
Confidence 222222 556889999998876554 45555664 44444
No 245
>PRK05137 tolB translocation protein TolB; Provisional
Probab=98.93 E-value=1.4e-07 Score=64.83 Aligned_cols=96 Identities=15% Similarity=0.204 Sum_probs=68.9
Q ss_pred CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC---CCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCC
Q psy11518 34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD---DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG 110 (139)
Q Consensus 34 ~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 110 (139)
..|.++|.. +.....+..+...+...+|+|+|+.|+..+. +..|.+||+.+++..... ...+. +...+|+|||
T Consensus 182 ~~l~~~d~d-g~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~--~~~g~-~~~~~~SPDG 257 (435)
T PRK05137 182 KRLAIMDQD-GANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVG--NFPGM-TFAPRFSPDG 257 (435)
T ss_pred eEEEEECCC-CCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEee--cCCCc-ccCcEECCCC
Confidence 378888874 4445566677788999999999998876543 467999999887664332 22333 6788999999
Q ss_pred cEEE-EEcCCCe--EEEEEcCCCcee
Q psy11518 111 KLAL-SVGKDKT--LRTWNLVKGRSA 133 (139)
Q Consensus 111 ~~l~-~~~~d~~--i~i~d~~~~~~~ 133 (139)
+.++ +.+.++. |.+||+.+++..
T Consensus 258 ~~la~~~~~~g~~~Iy~~d~~~~~~~ 283 (435)
T PRK05137 258 RKVVMSLSQGGNTDIYTMDLRSGTTT 283 (435)
T ss_pred CEEEEEEecCCCceEEEEECCCCceE
Confidence 8775 4454544 777798877654
No 246
>PRK03629 tolB translocation protein TolB; Provisional
Probab=98.93 E-value=2.6e-07 Score=63.40 Aligned_cols=112 Identities=12% Similarity=0.183 Sum_probs=73.5
Q ss_pred EEEecCCcEEEEe-CCCC--eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC-CCc--EEEEEeCCceEEEE
Q psy11518 18 RSVAATSKLAASS-GADE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD-DGS--IAIFRVGSWQLEKL 91 (139)
Q Consensus 18 ~~~~~~~~~l~~~-~~~~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~~~d~~~~~~~~~ 91 (139)
..+++||+.|+.. ..++ .|.+||+++++... +..+...+....|+|+++.++..+. ++. |..+|+.++.....
T Consensus 248 ~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~~~l 326 (429)
T PRK03629 248 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAPQRI 326 (429)
T ss_pred eEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCeEEe
Confidence 3566689877754 4344 58889998776543 3334456778899999998875554 444 44456666654433
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcCC---CeEEEEEcCCCcee
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGKD---KTLRTWNLVKGRSA 133 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~ 133 (139)
. . .. .......|+|+|++++..+.+ ..|.+||+.+++..
T Consensus 327 t-~-~~-~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~~ 368 (429)
T PRK03629 327 T-W-EG-SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ 368 (429)
T ss_pred e-c-CC-CCccCEEECCCCCEEEEEEccCCCceEEEEECCCCCeE
Confidence 2 1 12 225678899999988776532 45888999887654
No 247
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.92 E-value=4.4e-07 Score=68.31 Aligned_cols=114 Identities=13% Similarity=0.129 Sum_probs=81.6
Q ss_pred EEecCCc-EEEEeCCCCeEEEEEccCCceeeEEEe-------------c--------CCCeEEEEECCCCCEEEEecCCC
Q psy11518 19 SVAATSK-LAASSGADETVVLYDMVKRKQSGALMQ-------------H--------EGTITCLKFTPEGSHLISCSDDG 76 (139)
Q Consensus 19 ~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~-------------~--------~~~v~~~~~~~~~~~l~~~~~d~ 76 (139)
++.++++ ++++-..++.|++||+.++.......+ . -.....++++++|+.+++-..++
T Consensus 746 avspdG~~LYVADs~n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~ 825 (1057)
T PLN02919 746 SLSPDLKELYIADSESSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNH 825 (1057)
T ss_pred EEeCCCCEEEEEECCCCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCC
Confidence 4445666 556667789999999887643211100 0 01235788999999888888899
Q ss_pred cEEEEEeCCceEEEEEEeCCC-----------CcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 77 SIAIFRVGSWQLEKLFKKAHK-----------GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 77 ~i~~~d~~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
.|++||..++........... -..+..++++++|+.+++-+.++.|++||+++++.
T Consensus 826 rIrviD~~tg~v~tiaG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 826 KIKKLDPATKRVTTLAGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred EEEEEECCCCeEEEEeccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 999999988766544422110 11367899999999999989999999999999875
No 248
>KOG1064|consensus
Probab=98.91 E-value=1.4e-09 Score=82.57 Aligned_cols=114 Identities=20% Similarity=0.354 Sum_probs=88.0
Q ss_pred ecceeeEEEEecCCcEEEEeC---CCCeEEEEEccCC-ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 11 HSHTASVRSVAATSKLAASSG---ADETVVLYDMVKR-KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 11 ~~~~~~v~~~~~~~~~l~~~~---~~~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
+.|.....++.|-+..+++++ .++.+.+||.... ..-..-..|.+.++++++.|..+.+++|+++|.+++||++..
T Consensus 2289 qchnk~~~Df~Fi~s~~~tag~s~d~~n~~lwDtl~~~~~s~v~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqr 2368 (2439)
T KOG1064|consen 2289 QCHNKALSDFRFIGSLLATAGRSSDNRNVCLWDTLLPPMNSLVHTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQR 2368 (2439)
T ss_pred ccCCccccceeeeehhhhccccCCCCCcccchhcccCcccceeeeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHH
Confidence 346666677777567777765 5679999996433 222222689999999999999999999999999999999988
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+++..++. ++ ...++++|+..|.++||++..-..+..+
T Consensus 2369 ql~h~~~~-----------~~-~~~~f~~~ss~g~ikIw~~s~~~ll~~~ 2406 (2439)
T KOG1064|consen 2369 QLRHTFQA-----------LD-TREYFVTGSSEGNIKIWRLSEFGLLHTF 2406 (2439)
T ss_pred HHHHHhhh-----------hh-hhheeeccCcccceEEEEccccchhhcC
Confidence 77666522 44 5678999999999999999877655543
No 249
>KOG1064|consensus
Probab=98.90 E-value=3e-09 Score=80.86 Aligned_cols=128 Identities=14% Similarity=0.204 Sum_probs=97.8
Q ss_pred eEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec---CCCcE
Q psy11518 4 LTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS---DDGSI 78 (139)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i 78 (139)
.+-.++..+. ..+..+.| +|+.+..+..||.+.+|... .++....+.|....+...|-. ..+++++ .++.+
T Consensus 2242 ~v~~~rt~g~-s~vtr~~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~ 2317 (2439)
T KOG1064|consen 2242 QVVCFRTAGN-SRVTRSRFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNV 2317 (2439)
T ss_pred eEEEeeccCc-chhhhhhhcccCCceeeeccCCceeecccC-CcceeccccCCccccceeeee--hhhhccccCCCCCcc
Confidence 3444555444 66666666 89999999999999999975 666666777888778888865 5666554 46789
Q ss_pred EEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.+||..-......+...|.++ ++++++-|..+.+++||.+|.|.+||++..+.++.+
T Consensus 2318 ~lwDtl~~~~~s~v~~~H~~g-aT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~ 2374 (2439)
T KOG1064|consen 2318 CLWDTLLPPMNSLVHTCHDGG-ATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTF 2374 (2439)
T ss_pred cchhcccCcccceeeeecCCC-ceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHh
Confidence 999976544444444667776 999999999999999999999999999988766543
No 250
>PRK02889 tolB translocation protein TolB; Provisional
Probab=98.90 E-value=2.4e-07 Score=63.54 Aligned_cols=113 Identities=19% Similarity=0.243 Sum_probs=71.3
Q ss_pred EEEecCCcEEE-EeCCCCeEEEEEccC-CceeeEEEecCCCeEEEEECCCCCEEEEec-CCCcEEEEEe--CCceEEEEE
Q psy11518 18 RSVAATSKLAA-SSGADETVVLYDMVK-RKQSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFRV--GSWQLEKLF 92 (139)
Q Consensus 18 ~~~~~~~~~l~-~~~~~~~v~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~--~~~~~~~~~ 92 (139)
..+++||+.++ +.+.++...+|..+. +.....+..+........|+|+|+.++..+ .++...+|.+ .++......
T Consensus 245 ~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~~~~lt 324 (427)
T PRK02889 245 PAWSPDGRTLAVALSRDGNSQIYTVNADGSGLRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGAAQRVT 324 (427)
T ss_pred eEECCCCCEEEEEEccCCCceEEEEECCCCCcEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCceEEEe
Confidence 34555888776 567777766665432 223444444555556788999999887544 4556666654 444433332
Q ss_pred EeCCCCcceeEEEEccCCcEEEEEcCCC---eEEEEEcCCCcee
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSVGKDK---TLRTWNLVKGRSA 133 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~ 133 (139)
.. ... ....+|+|+|++++..+.++ .|.+||+.+++..
T Consensus 325 -~~-g~~-~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~ 365 (427)
T PRK02889 325 -FT-GSY-NTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT 365 (427)
T ss_pred -cC-CCC-cCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE
Confidence 12 112 44578999999988766543 6999999887654
No 251
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.90 E-value=3.7e-07 Score=62.26 Aligned_cols=110 Identities=20% Similarity=0.254 Sum_probs=73.3
Q ss_pred EecCCcEEEEeCCC---CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCC--cEEEEEeCCceEEEEEE
Q psy11518 20 VAATSKLAASSGAD---ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDG--SIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 20 ~~~~~~~l~~~~~~---~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~--~i~~~d~~~~~~~~~~~ 93 (139)
++++++.++....+ ..|.+||+.+++... +..+...+.+++|+|+++.++ +.+.++ .|.+||+.++......
T Consensus 197 ~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~-~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~~l~- 274 (417)
T TIGR02800 197 WSPDGQKLAYVSFESGKPEIYVQDLATGQREK-VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLTRLT- 274 (417)
T ss_pred CCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEEECC-
Confidence 34488888766533 589999998875433 333455567789999998776 444444 5888898876654333
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCC---CeEEEEEcCCCcee
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKD---KTLRTWNLVKGRSA 133 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~ 133 (139)
.+... .....|+|+++.|+..+.. ..|.++|+.+++..
T Consensus 275 -~~~~~-~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~ 315 (417)
T TIGR02800 275 -NGPGI-DTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVR 315 (417)
T ss_pred -CCCCC-CCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence 22222 4567899999988766542 36888888876643
No 252
>KOG4497|consensus
Probab=98.90 E-value=1.4e-08 Score=65.71 Aligned_cols=115 Identities=14% Similarity=0.212 Sum_probs=86.7
Q ss_pred eeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCcEEEEEeCCceEEEEEE
Q psy11518 15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
++..+++++|+++++++.- .+.|-|.++-+..+.+.. -..|..+-|..+..+++ ....++.|.+|++...+....+
T Consensus 11 ~~~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~c-ldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckI- 87 (447)
T KOG4497|consen 11 NPFCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLC-LDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKI- 87 (447)
T ss_pred CCceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHH-HHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEe-
Confidence 4467788899999999865 788888877765444332 34577888988877665 5567889999999988877777
Q ss_pred eCCCCcceeEEEEccCCcEEE-EEcCCCeEEEEEcCCCcee
Q psy11518 94 KAHKGTAVNHISIHPSGKLAL-SVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~ 133 (139)
.....+ +.+++|+|+|+.++ +...|-+|.+|.+.+.+..
T Consensus 88 deg~ag-ls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~ 127 (447)
T KOG4497|consen 88 DEGQAG-LSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY 127 (447)
T ss_pred ccCCCc-ceeeeECCCcceEeeeecceeEEEEEEeccceeE
Confidence 333334 89999999997555 5557999999999886654
No 253
>KOG1240|consensus
Probab=98.89 E-value=4.3e-07 Score=67.41 Aligned_cols=125 Identities=14% Similarity=0.238 Sum_probs=91.1
Q ss_pred cceeeEEEEecCCcEEEEeCCCCeEEEEEccCC--cee-----------------e------------------------
Q psy11518 12 SHTASVRSVAATSKLAASSGADETVVLYDMVKR--KQS-----------------G------------------------ 48 (139)
Q Consensus 12 ~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~--~~~-----------------~------------------------ 48 (139)
+....+....+.+..+|+++.||.|++.+++.. +.. .
T Consensus 1098 ~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~ 1177 (1431)
T KOG1240|consen 1098 GSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVS 1177 (1431)
T ss_pred CCceEEEEeccCCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEE
Confidence 344444455558889999999999999887641 000 0
Q ss_pred ----------E--EEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCC---cEE
Q psy11518 49 ----------A--LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG---KLA 113 (139)
Q Consensus 49 ----------~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l 113 (139)
+ .....+.|++++.+|.+++++.|...|.+.+||++=+.++.....++... +..++.+|-. ...
T Consensus 1178 ~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~-i~~v~~~~~~~~~S~~ 1256 (1431)
T KOG1240|consen 1178 WDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAP-IRHVWLCPTYPQESVS 1256 (1431)
T ss_pred ecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCC-cceEEeeccCCCCceE
Confidence 0 00124578999999999999999999999999999888888886666644 8888888733 345
Q ss_pred EEEc--CCCeEEEEEcCCCceeEEEe
Q psy11518 114 LSVG--KDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 114 ~~~~--~d~~i~i~d~~~~~~~~~~~ 137 (139)
++++ ..+.|.+|++.+|.....+-
T Consensus 1257 vs~~~~~~nevs~wn~~~g~~~~vl~ 1282 (1431)
T KOG1240|consen 1257 VSAGSSSNNEVSTWNMETGLRQTVLW 1282 (1431)
T ss_pred EEecccCCCceeeeecccCcceEEEE
Confidence 5444 46789999999997666543
No 254
>KOG1409|consensus
Probab=98.89 E-value=2.6e-08 Score=64.61 Aligned_cols=105 Identities=21% Similarity=0.360 Sum_probs=83.2
Q ss_pred EEEEeCCCCeEEEEEc--cCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeE
Q psy11518 26 LAASSGADETVVLYDM--VKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH 103 (139)
Q Consensus 26 ~l~~~~~~~~v~i~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~ 103 (139)
+...|...|.|..-.+ ..-.++.++.+|.+.+.+++|.+....+.+|..|..+.+||+....-+......|... |..
T Consensus 167 ~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~k-V~~ 245 (404)
T KOG1409|consen 167 YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDK-VQA 245 (404)
T ss_pred EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhh-hhh
Confidence 4455666666655443 3446678889999999999999999999999999999999997666555443455555 888
Q ss_pred EEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 104 ISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 104 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
++.-+--+.+.++++||.|.+||+....
T Consensus 246 l~~~~~t~~l~S~~edg~i~~w~mn~~r 273 (404)
T KOG1409|consen 246 LSYAQHTRQLISCGEDGGIVVWNMNVKR 273 (404)
T ss_pred hhhhhhheeeeeccCCCeEEEEecccee
Confidence 8888888999999999999999997654
No 255
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.89 E-value=4.3e-07 Score=62.32 Aligned_cols=111 Identities=18% Similarity=0.240 Sum_probs=72.6
Q ss_pred EEecCCcEEEEeCC---CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCC--cEEEEEeCCceEEEEE
Q psy11518 19 SVAATSKLAASSGA---DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDG--SIAIFRVGSWQLEKLF 92 (139)
Q Consensus 19 ~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~--~i~~~d~~~~~~~~~~ 92 (139)
.++++|+.|+..+. ...|.+|++.+++... +....+.+....|+|+|+.++ +...++ .|.++|+.++......
T Consensus 205 ~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~~lt 283 (430)
T PRK00178 205 RWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLSRVT 283 (430)
T ss_pred eECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeEEcc
Confidence 44458888866542 2478899998875433 222333455789999999876 454555 5888899887654432
Q ss_pred EeCCCCcceeEEEEccCCcEEEEEcC-C--CeEEEEEcCCCcee
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSVGK-D--KTLRTWNLVKGRSA 133 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~-d--~~i~i~d~~~~~~~ 133 (139)
.+... .....|+||++.++..+. + ..|.++|+.+++..
T Consensus 284 --~~~~~-~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~ 324 (430)
T PRK00178 284 --NHPAI-DTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAE 324 (430)
T ss_pred --cCCCC-cCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence 22222 556789999998776553 3 35777888777643
No 256
>KOG1334|consensus
Probab=98.87 E-value=1.8e-08 Score=67.86 Aligned_cols=125 Identities=22% Similarity=0.321 Sum_probs=98.2
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE-ecCCCeEEEEECC--CCCEEEEecCCCcEEEEEe
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTP--EGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~ 83 (139)
++.+|.+.+..+.| .|..+++|+.|..|.+||...+++...+. +|...|..-.|-| +.+.+++++.||++++=.+
T Consensus 137 kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i 216 (559)
T KOG1334|consen 137 KLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEI 216 (559)
T ss_pred cccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeee
Confidence 34578899999998 79999999999999999999988877765 6888888878888 4567899999999998776
Q ss_pred CCceE-EEEEE-eCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCCceeE
Q psy11518 84 GSWQL-EKLFK-KAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 84 ~~~~~-~~~~~-~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
..... ..... ..|.+. +.-++.-|+.. -+.++++|+.+.-+|++++.+.-
T Consensus 217 ~~t~~~e~t~rl~~h~g~-vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~ 269 (559)
T KOG1334|consen 217 LETGYVENTKRLAPHEGP-VHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAE 269 (559)
T ss_pred ccccceecceecccccCc-cceeeecCCCCCcccccccccceeeeeeccCCccc
Confidence 44332 21222 344444 89999999665 68899999999999999876543
No 257
>KOG2066|consensus
Probab=98.85 E-value=2.4e-07 Score=65.88 Aligned_cols=109 Identities=12% Similarity=0.176 Sum_probs=81.5
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCC-----CCEEEEecCCCcEEEEEeCCce-EEEEEEeCC
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE-----GSHLISCSDDGSIAIFRVGSWQ-LEKLFKKAH 96 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~-----~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~~ 96 (139)
+|+++++++.||.|.|..+-+.+...++.- .-++.+++++|+ .+.+++|+..| +.++.-+-.. .........
T Consensus 82 ~Gey~asCS~DGkv~I~sl~~~~~~~~~df-~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~ 159 (846)
T KOG2066|consen 82 EGEYVASCSDDGKVVIGSLFTDDEITQYDF-KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEG 159 (846)
T ss_pred CCceEEEecCCCcEEEeeccCCccceeEec-CCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhcCccceeeecC
Confidence 489999999999999999988887777664 457899999997 46788999888 6665532111 111121333
Q ss_pred CCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 97 KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 97 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
. ++|.++.|. |.+++=++++| |++||+.+++.+..+.
T Consensus 160 e-G~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~l~~i~ 196 (846)
T KOG2066|consen 160 E-GPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQRLTNIP 196 (846)
T ss_pred c-cceEEEEec--CcEEEEecCCC-cEEEeccccceeeccC
Confidence 4 449999995 78888888887 8999999988876654
No 258
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.83 E-value=5.5e-06 Score=55.44 Aligned_cols=111 Identities=14% Similarity=0.250 Sum_probs=73.9
Q ss_pred EEEEecCCcEEEEeC-CCCeEEEEEccC-CceeeE---EE--e--------cCCCeEEEEECCCCCEEEEec-CCCcEEE
Q psy11518 17 VRSVAATSKLAASSG-ADETVVLYDMVK-RKQSGA---LM--Q--------HEGTITCLKFTPEGSHLISCS-DDGSIAI 80 (139)
Q Consensus 17 v~~~~~~~~~l~~~~-~~~~v~i~~~~~-~~~~~~---~~--~--------~~~~v~~~~~~~~~~~l~~~~-~d~~i~~ 80 (139)
-.++.+++++++++. .+|.|.++++.. +..... +. + ......++.++|+++++++.. ....|.+
T Consensus 91 ~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~ 170 (345)
T PF10282_consen 91 HIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYV 170 (345)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEE
T ss_pred EEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEE
Confidence 345556888887776 589999999977 333222 11 0 124467899999999877653 3557999
Q ss_pred EEeCCce--EE--EEEEeCCCCcceeEEEEccCCcEEEEEc-CCCeEEEEEcC
Q psy11518 81 FRVGSWQ--LE--KLFKKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLV 128 (139)
Q Consensus 81 ~d~~~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~ 128 (139)
|++.... +. ..+..+ .+....++.|+|+++++++.. .++.|.+|++.
T Consensus 171 ~~~~~~~~~l~~~~~~~~~-~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~ 222 (345)
T PF10282_consen 171 YDIDDDTGKLTPVDSIKVP-PGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYD 222 (345)
T ss_dssp EEE-TTS-TEEEEEEEECS-TTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEeCCCceEEEeeccccc-cCCCCcEEEEcCCcCEEEEecCCCCcEEEEeec
Confidence 9997654 32 233233 333389999999999876665 57889999998
No 259
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.81 E-value=5.3e-07 Score=61.89 Aligned_cols=115 Identities=13% Similarity=0.147 Sum_probs=74.5
Q ss_pred EEEecCCcEEEEeC-CCCeEEEEE--ccC-CceeeEEEecCCCeEEEEECCCCCEEEEecCC---CcEEEEEeCCceEEE
Q psy11518 18 RSVAATSKLAASSG-ADETVVLYD--MVK-RKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GSIAIFRVGSWQLEK 90 (139)
Q Consensus 18 ~~~~~~~~~l~~~~-~~~~v~i~~--~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~~~~~~~ 90 (139)
.++++||+.|+..+ .++...+|. +.. +.....+..+...+....|+|+|+.++....+ ..|.+||+.+++...
T Consensus 286 p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~ 365 (428)
T PRK01029 286 PSFSPDGTRLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ 365 (428)
T ss_pred eEECCCCCEEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE
Confidence 35666888766544 456555554 432 22334444444566788999999988755432 368999998887654
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcC---CCeEEEEEcCCCceeEE
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGK---DKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~~ 135 (139)
.. . ... .+....|+|||+.|+.... ...|.++|+..++....
T Consensus 366 Lt-~-~~~-~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~L 410 (428)
T PRK01029 366 LT-T-SPE-NKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKI 410 (428)
T ss_pred cc-C-CCC-CccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEe
Confidence 43 1 122 2677899999998775432 45688999988766543
No 260
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=98.80 E-value=2.1e-06 Score=56.12 Aligned_cols=122 Identities=19% Similarity=0.306 Sum_probs=83.4
Q ss_pred EeecceeeEEEEecCCcEEEEeC-CCCeEEEEEccC-Ccee--eEEEecCCC----------eEEEEECCCCCEEEEecC
Q psy11518 9 VTHSHTASVRSVAATSKLAASSG-ADETVVLYDMVK-RKQS--GALMQHEGT----------ITCLKFTPEGSHLISCSD 74 (139)
Q Consensus 9 ~~~~~~~~v~~~~~~~~~l~~~~-~~~~v~i~~~~~-~~~~--~~~~~~~~~----------v~~~~~~~~~~~l~~~~~ 74 (139)
...++.-.-.++..++++++++. ..|.|.++.+.. |... .....|.+. +....+.|+++++++.+-
T Consensus 85 ~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DL 164 (346)
T COG2706 85 TLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDL 164 (346)
T ss_pred ccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeec
Confidence 33344333345555888888776 467999999865 4322 122234444 788899999999987754
Q ss_pred -CCcEEEEEeCCceEEEEEEe-CCCCcceeEEEEccCCcEEEEEcC-CCeEEEEEcCCC
Q psy11518 75 -DGSIAIFRVGSWQLEKLFKK-AHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKG 130 (139)
Q Consensus 75 -d~~i~~~d~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~ 130 (139)
-..|.+|++..+.+...-.. ...+.-...|.|+|++++..+..+ +++|.+|.....
T Consensus 165 G~Dri~~y~~~dg~L~~~~~~~v~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~ 223 (346)
T COG2706 165 GTDRIFLYDLDDGKLTPADPAEVKPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPA 223 (346)
T ss_pred CCceEEEEEcccCccccccccccCCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCC
Confidence 34699999987765432211 122333799999999999888876 899999998773
No 261
>KOG4714|consensus
Probab=98.80 E-value=3.7e-08 Score=61.81 Aligned_cols=105 Identities=18% Similarity=0.249 Sum_probs=76.1
Q ss_pred EEec-CCcEEEEeCCCCeEEEEEccCCc-eeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCCceEEEEEE--
Q psy11518 19 SVAA-TSKLAASSGADETVVLYDMVKRK-QSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFK-- 93 (139)
Q Consensus 19 ~~~~-~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~-- 93 (139)
|..| ..+.+++|+.||.+.+||.+... +...++.|+.+++.+-|+| ++..|++++.||.+.-||..+.. +..-.
T Consensus 186 ~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~~-l~i~~~~ 264 (319)
T KOG4714|consen 186 CSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTTF-LSISNQA 264 (319)
T ss_pred hCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCCcEEEEcCCCce-EEecCcc
Confidence 3334 77789999999999999998764 4456778999999999999 68899999999999999976321 11100
Q ss_pred ---------------------eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 94 ---------------------KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 94 ---------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
.+.....|.+ |.--|..+++|++-+.|++++
T Consensus 265 s~~s~WLsgD~v~s~i~i~~ll~~~~~Sins--fDV~g~~lVcgtd~eaIyl~~ 316 (319)
T KOG4714|consen 265 SVISSWLSGDPVKSRIEITSLLPSRSLSINS--FDVLGPCLVCGTDAEAIYLTR 316 (319)
T ss_pred ccccccccCCcccceEeeeccccccceeeee--eeccCceEEeccccceEEEec
Confidence 0111111333 444688899999988888865
No 262
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.79 E-value=4.5e-07 Score=62.55 Aligned_cols=70 Identities=19% Similarity=0.298 Sum_probs=55.1
Q ss_pred ceeeEEEEe--cCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 13 HTASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 13 ~~~~v~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
....+.|++ ++.+.++.|+.||+|.+||...+.... ....-..+.++|+|+|..+++|+..|.+.+||+.
T Consensus 258 L~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~--~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~A 329 (545)
T PF11768_consen 258 LPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLL--AKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMA 329 (545)
T ss_pred cCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeee--eeecccceEEEEcCCCcEEEEEcCCceEEEEEee
Confidence 344455555 488999999999999999986663332 2334456899999999999999999999999974
No 263
>KOG4532|consensus
Probab=98.78 E-value=6e-07 Score=56.80 Aligned_cols=105 Identities=11% Similarity=0.013 Sum_probs=75.4
Q ss_pred EEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc-eEEEE-EEeCCCCcceeEE
Q psy11518 27 AASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW-QLEKL-FKKAHKGTAVNHI 104 (139)
Q Consensus 27 l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~~~~-~~~~~~~~~v~~~ 104 (139)
+..++.|.++++.+++.+.....+.-..-.+.++.++++++++++.+....|-.|.+... +.+.. ...+.... -.+.
T Consensus 131 ~~i~sndht~k~~~~~~~s~~~~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~-gF~~ 209 (344)
T KOG4532|consen 131 LNIASNDHTGKTMVVSGDSNKFAVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDH-GFYN 209 (344)
T ss_pred eeeccCCcceeEEEEecCcccceeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCC-ceee
Confidence 555677777777777655433333222223788999999999999999999999988653 33332 32233333 5778
Q ss_pred EEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 105 SIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 105 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
.|+.+...++++..||.+.|||+|....
T Consensus 210 S~s~~~~~FAv~~Qdg~~~I~DVR~~~t 237 (344)
T KOG4532|consen 210 SFSENDLQFAVVFQDGTCAIYDVRNMAT 237 (344)
T ss_pred eeccCcceEEEEecCCcEEEEEeccccc
Confidence 9999999999999999999999987543
No 264
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.77 E-value=1.3e-06 Score=60.39 Aligned_cols=111 Identities=19% Similarity=0.327 Sum_probs=71.6
Q ss_pred EEecCCcEEEEeCC-C--CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCc--EEEEEeCCceEEEEE
Q psy11518 19 SVAATSKLAASSGA-D--ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGS--IAIFRVGSWQLEKLF 92 (139)
Q Consensus 19 ~~~~~~~~l~~~~~-~--~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~~~d~~~~~~~~~~ 92 (139)
.+++||+.|+..+. + ..|.++|+.+++... +..........+|+|+++.++ +.+.++. |.++|+.+++.....
T Consensus 224 ~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~-lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~~lt 302 (448)
T PRK04792 224 AWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK-VTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALTRIT 302 (448)
T ss_pred eECCCCCEEEEEEecCCCcEEEEEECCCCCeEE-ecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeEECc
Confidence 44558888776532 2 368888988776432 222223345779999999876 4555664 777888877654433
Q ss_pred EeCCCCcceeEEEEccCCcEEEEEcC-C--CeEEEEEcCCCcee
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSVGK-D--KTLRTWNLVKGRSA 133 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~-d--~~i~i~d~~~~~~~ 133 (139)
.+... ....+|+||+++++..+. + ..|.++|+.+++..
T Consensus 303 --~~~~~-~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~ 343 (448)
T PRK04792 303 --RHRAI-DTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVS 343 (448)
T ss_pred --cCCCC-ccceEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence 22222 567899999998876553 3 45777788777654
No 265
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=98.76 E-value=4e-06 Score=55.94 Aligned_cols=110 Identities=12% Similarity=0.181 Sum_probs=81.3
Q ss_pred CCcEEEEeCCCCeEEEEEccCC-----ceeeEEEe-------cCCCeEEEEECCCCCEEEEec----------CCCcEEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKR-----KQSGALMQ-------HEGTITCLKFTPEGSHLISCS----------DDGSIAI 80 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~-----~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~ 80 (139)
++.++.+..+ |.|.+.|+... +....+.. ..+...-++++|+++.+.... ..+.|.+
T Consensus 205 dg~~~~vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~V 283 (352)
T TIGR02658 205 SGRLVWPTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFV 283 (352)
T ss_pred CCcEEEEecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEE
Confidence 7777777776 99999995432 32322211 223344589999988887642 2247999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccCCc-EEEEEc-CCCeEEEEEcCCCceeEEE
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGK-LALSVG-KDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~i~d~~~~~~~~~~ 136 (139)
+|..+++.+..+.... .+..++++||++ ++++.. .++.|.++|..+++.+..+
T Consensus 284 iD~~t~kvi~~i~vG~---~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 284 VDAKTGKRLRKIELGH---EIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred EECCCCeEEEEEeCCC---ceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 9999999998885443 388999999999 887666 5788999999999998876
No 266
>KOG4714|consensus
Probab=98.75 E-value=1.1e-08 Score=64.00 Aligned_cols=74 Identities=20% Similarity=0.388 Sum_probs=60.5
Q ss_pred CCeEEEEECCC-CCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCC
Q psy11518 55 GTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 55 ~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~ 129 (139)
..|++++-+|. ...+++|+.||.+.+||.++...+..+-..|+.. ++.+-|+| ++..|+++++||.+.-||..+
T Consensus 180 ~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~-i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 180 DAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAE-IWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhh-hhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 34888888885 4566788999999999999886665554556655 99999999 667999999999999999864
No 267
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=98.75 E-value=2.2e-06 Score=58.55 Aligned_cols=110 Identities=20% Similarity=0.269 Sum_probs=72.3
Q ss_pred EEecCCcEEE-EeCCCC--eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC-CC--cEEEEEeCCceEEEEE
Q psy11518 19 SVAATSKLAA-SSGADE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD-DG--SIAIFRVGSWQLEKLF 92 (139)
Q Consensus 19 ~~~~~~~~l~-~~~~~~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~~~~~~ 92 (139)
.++++++.|+ +...++ .|.+|++.++.. ..+..+........|+|+++.++..+. .+ .|.++|+.+++.....
T Consensus 240 ~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~~~l~ 318 (417)
T TIGR02800 240 AFSPDGSKLAVSLSKDGNPDIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEVRRLT 318 (417)
T ss_pred EECCCCCEEEEEECCCCCccEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCEEEee
Confidence 4445887665 444444 588888877643 333334444456789999998865443 33 5777887766644332
Q ss_pred EeCCCCcceeEEEEccCCcEEEEEcCCC---eEEEEEcCCCce
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSVGKDK---TLRTWNLVKGRS 132 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~ 132 (139)
.+... .....|+|++++++.++.++ .|.+||+.++..
T Consensus 319 --~~~~~-~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~ 358 (417)
T TIGR02800 319 --FRGGY-NASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE 358 (417)
T ss_pred --cCCCC-ccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe
Confidence 12222 66789999999998887665 799999987654
No 268
>PRK01029 tolB translocation protein TolB; Provisional
Probab=98.71 E-value=2.8e-06 Score=58.42 Aligned_cols=115 Identities=20% Similarity=0.258 Sum_probs=67.5
Q ss_pred EEEecCCcEEEEeC-C----CCeEEEEEccCC---ceeeEEEecCCCeEEEEECCCCCEEEEe-cCCCcEEEEE--eCC-
Q psy11518 18 RSVAATSKLAASSG-A----DETVVLYDMVKR---KQSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFR--VGS- 85 (139)
Q Consensus 18 ~~~~~~~~~l~~~~-~----~~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d--~~~- 85 (139)
..+++||+.|+..+ . +-.+..|++..+ +...............+|+|+|+.++.. ..+|...+|. +..
T Consensus 236 p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~~ 315 (428)
T PRK01029 236 PTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDPE 315 (428)
T ss_pred eEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECccc
Confidence 35566898777543 2 223445676542 3222222222334677999999987754 4566555554 432
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcC---CCeEEEEEcCCCceeE
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK---DKTLRTWNLVKGRSAY 134 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~i~d~~~~~~~~ 134 (139)
+.....+ ..... .+....|+|||+.|+..+. ...|.+||+.+++...
T Consensus 316 g~~~~~l-t~~~~-~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~~ 365 (428)
T PRK01029 316 GQSPRLL-TKKYR-NSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDYQ 365 (428)
T ss_pred ccceEEe-ccCCC-CccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeEE
Confidence 2222223 12222 2677899999998886654 2469999998887643
No 269
>KOG4497|consensus
Probab=98.70 E-value=6.5e-07 Score=58.17 Aligned_cols=97 Identities=18% Similarity=0.295 Sum_probs=72.4
Q ss_pred EEEec--CCcE-EEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCE-EEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 18 RSVAA--TSKL-AASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSH-LISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 18 ~~~~~--~~~~-l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.-+.| +..+ +.....++.|.+|++...+-...++....++..++|+|+|+. |.+...+-.|.+|.+.+......
T Consensus 52 ~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~-- 129 (447)
T KOG4497|consen 52 VYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLL-- 129 (447)
T ss_pred hheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEe--
Confidence 33444 4444 445567889999999888777777777889999999999965 55777899999999987654332
Q ss_pred eCCCCcceeEEEEccCCcEEEEEc
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVG 117 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~ 117 (139)
.+....+-.++|+|+|++.+..+
T Consensus 130 -~~pK~~~kg~~f~~dg~f~ai~s 152 (447)
T KOG4497|consen 130 -PHPKTNVKGYAFHPDGQFCAILS 152 (447)
T ss_pred -cccccCceeEEECCCCceeeeee
Confidence 23322368899999999987665
No 270
>KOG0309|consensus
Probab=98.69 E-value=9.3e-08 Score=67.77 Aligned_cols=126 Identities=18% Similarity=0.252 Sum_probs=94.1
Q ss_pred EEEEeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCC-ceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEE
Q psy11518 6 QTFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR-KQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAI 80 (139)
Q Consensus 6 ~~~~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~ 80 (139)
-.|..++|...++.+.| ....+++++.|..+..||+.+. .++.........-+.+.|+. ++..+| .+....|.+
T Consensus 106 Ief~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vla-sshg~~i~v 184 (1081)
T KOG0309|consen 106 IEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLA-SSHGNDIFV 184 (1081)
T ss_pred eEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhh-hccCCceEE
Confidence 35677899999999998 5567999999999999999875 56666666566668999987 444444 445557999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
||.+.+......-..+... +..++|+. -...+.+.+.|+.|..||.......
T Consensus 185 wd~r~gs~pl~s~K~~vs~-vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e 237 (1081)
T KOG0309|consen 185 WDLRKGSTPLCSLKGHVSS-VNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTE 237 (1081)
T ss_pred EeccCCCcceEEeccccee-eehHHHhhhhhhhhcccCCCCceeeecccccccc
Confidence 9998876554442444443 88888876 3346788899999999998765443
No 271
>KOG3914|consensus
Probab=98.67 E-value=6.3e-08 Score=63.67 Aligned_cols=81 Identities=16% Similarity=0.219 Sum_probs=65.0
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEE-EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
-||...++++.+ |+++++++..|..|++-.......+..+ -||+..|..++.-++. .|++++.|++|++||+.+++
T Consensus 148 lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~-~LlS~sGD~tlr~Wd~~sgk 226 (390)
T KOG3914|consen 148 LGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY-LLLSGSGDKTLRLWDITSGK 226 (390)
T ss_pred hhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc-eeeecCCCCcEEEEecccCC
Confidence 367777777776 9999999999999998877655444443 4799999999987654 48999999999999999988
Q ss_pred EEEEE
Q psy11518 88 LEKLF 92 (139)
Q Consensus 88 ~~~~~ 92 (139)
.+..+
T Consensus 227 ~L~t~ 231 (390)
T KOG3914|consen 227 LLDTC 231 (390)
T ss_pred ccccc
Confidence 76544
No 272
>KOG4532|consensus
Probab=98.67 E-value=7e-06 Score=52.14 Aligned_cols=117 Identities=12% Similarity=0.072 Sum_probs=83.1
Q ss_pred ecCCcEEEEeCCCCeEEEEEccCC-ceeeE--EEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE---EEEe
Q psy11518 21 AATSKLAASSGADETVVLYDMVKR-KQSGA--LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK---LFKK 94 (139)
Q Consensus 21 ~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~---~~~~ 94 (139)
+.+++++++.+....|-.|.+... +.+.. .......-.+.+|+.....+|++..||.+.+||++.....- ....
T Consensus 167 snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstr 246 (344)
T KOG4532|consen 167 SNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTR 246 (344)
T ss_pred cCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhhcccC
Confidence 348889999998899999988654 22222 22222333688999999999999999999999998754321 1123
Q ss_pred CCCCcceeEEEEccCCc--EEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 95 AHKGTAVNHISIHPSGK--LALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+++.+.+..+.|++-|. +|+..-.-+.+++-|+|+++..+.+-
T Consensus 247 p~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~ 291 (344)
T KOG4532|consen 247 PHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIV 291 (344)
T ss_pred CCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEe
Confidence 44444499999998664 44444455789999999998877654
No 273
>KOG0644|consensus
Probab=98.66 E-value=1.2e-07 Score=67.96 Aligned_cols=107 Identities=15% Similarity=0.173 Sum_probs=90.2
Q ss_pred EEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEE
Q psy11518 26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHI 104 (139)
Q Consensus 26 ~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~ 104 (139)
+.+++-.+..+++|++.++...+.+.+|...+..+.++| +.+...+++.||...+||+-.+.++..+..+ +.. +..-
T Consensus 367 ~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~pik~y~~g-h~k-l~d~ 444 (1113)
T KOG0644|consen 367 IVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIPIKHYFIG-HGK-LVDG 444 (1113)
T ss_pred cceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCcceeeecc-cce-eecc
Confidence 445555677899999999999999999999999999999 4555568899999999999999999888644 433 7889
Q ss_pred EEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 105 SIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 105 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
.|+++|..++....-|.+.|.....++...
T Consensus 445 kFSqdgts~~lsd~hgql~i~g~gqs~s~k 474 (1113)
T KOG0644|consen 445 KFSQDGTSIALSDDHGQLYILGTGQSKSQK 474 (1113)
T ss_pred ccCCCCceEecCCCCCceEEeccCCCcccc
Confidence 999999999999999999999887776554
No 274
>KOG4640|consensus
Probab=98.66 E-value=4e-07 Score=63.34 Aligned_cols=80 Identities=21% Similarity=0.299 Sum_probs=68.5
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
..+..+.|+|.-..+|++..+|.+.+..+. ++.++.+..+.... ..+++|.|||+.+++|-.||+|++-|..++..+.
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v-~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~ 98 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENV-TASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLV 98 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCcc-ceeeeecCCCCEEEEEecCCeEEEEEccCCCcee
Confidence 457788999999999999999999999988 78888884343332 3499999999999999999999999999998887
Q ss_pred EE
Q psy11518 135 IT 136 (139)
Q Consensus 135 ~~ 136 (139)
..
T Consensus 99 ~~ 100 (665)
T KOG4640|consen 99 SF 100 (665)
T ss_pred cc
Confidence 63
No 275
>PRK00178 tolB translocation protein TolB; Provisional
Probab=98.65 E-value=2.8e-06 Score=58.36 Aligned_cols=95 Identities=17% Similarity=0.221 Sum_probs=65.2
Q ss_pred eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCC---CcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCc
Q psy11518 35 TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK 111 (139)
Q Consensus 35 ~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (139)
.|.++|.+.+. ...+..+...+...+|+|+|+.++..+.+ ..|.+||+.++...... ...+. ....+|+|||+
T Consensus 180 ~l~~~d~~g~~-~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~--~~~g~-~~~~~~SpDG~ 255 (430)
T PRK00178 180 TLQRSDYDGAR-AVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQIT--NFEGL-NGAPAWSPDGS 255 (430)
T ss_pred EEEEECCCCCC-ceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEcc--CCCCC-cCCeEECCCCC
Confidence 47777876544 44455566778899999999988765433 35889999887654433 12222 55689999999
Q ss_pred EEEE-EcCCC--eEEEEEcCCCcee
Q psy11518 112 LALS-VGKDK--TLRTWNLVKGRSA 133 (139)
Q Consensus 112 ~l~~-~~~d~--~i~i~d~~~~~~~ 133 (139)
.++. ...++ .|.+||+.+++..
T Consensus 256 ~la~~~~~~g~~~Iy~~d~~~~~~~ 280 (430)
T PRK00178 256 KLAFVLSKDGNPEIYVMDLASRQLS 280 (430)
T ss_pred EEEEEEccCCCceEEEEECCCCCeE
Confidence 8764 44444 6888899887654
No 276
>KOG1354|consensus
Probab=98.64 E-value=1.4e-06 Score=56.96 Aligned_cols=113 Identities=20% Similarity=0.361 Sum_probs=79.9
Q ss_pred eeEEEEec--CCcEEEEeCCCCeEEEEEccCCc-----eeeEEEec------------CCCeEEEEECCCC--CEEEEec
Q psy11518 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRK-----QSGALMQH------------EGTITCLKFTPEG--SHLISCS 73 (139)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~-----~~~~~~~~------------~~~v~~~~~~~~~--~~l~~~~ 73 (139)
.-+.++.| .|++|++|..+|.|.+|.-.... ....++.| ...|..+.|.+++ ..++...
T Consensus 26 diis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLlst 105 (433)
T KOG1354|consen 26 DIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLST 105 (433)
T ss_pred cceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEec
Confidence 45667777 89999999999999999754322 23334444 3368889998854 4567778
Q ss_pred CCCcEEEEEeCCce-----------------------------------EEEEEEeCCCCcceeEEEEccCCcEEEEEcC
Q psy11518 74 DDGSIAIFRVGSWQ-----------------------------------LEKLFKKAHKGTAVNHISIHPSGKLALSVGK 118 (139)
Q Consensus 74 ~d~~i~~~d~~~~~-----------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 118 (139)
.|.+|++|.++... +.+.+...|.-. |.+++++.|++.++++.
T Consensus 106 NdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyh-iNSIS~NsD~Et~lSAD- 183 (433)
T KOG1354|consen 106 NDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYH-INSISVNSDKETFLSAD- 183 (433)
T ss_pred CCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeE-eeeeeecCccceEeecc-
Confidence 89999999875321 122333444444 89999999999888775
Q ss_pred CCeEEEEEcCC
Q psy11518 119 DKTLRTWNLVK 129 (139)
Q Consensus 119 d~~i~i~d~~~ 129 (139)
|-+|.+|+++-
T Consensus 184 dLRINLWnlei 194 (433)
T KOG1354|consen 184 DLRINLWNLEI 194 (433)
T ss_pred ceeeeeccccc
Confidence 67899999863
No 277
>KOG1275|consensus
Probab=98.63 E-value=3.1e-07 Score=66.41 Aligned_cols=121 Identities=17% Similarity=0.324 Sum_probs=90.3
Q ss_pred eeeEEEEEeecceeeEEEEecCCcEEEEeC---------CCCeEEEEEccCCceeeEEEecCCCeEEEEECCC-CCEEEE
Q psy11518 2 YTLTQTFVTHSHTASVRSVAATSKLAASSG---------ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE-GSHLIS 71 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~---------~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~ 71 (139)
++.++++. .|.+.+.++...|+.|++++ .|..|+|||++..+.+.-+.-+.++ .-+.|.|. ...++.
T Consensus 207 ~~~iht~~--aHs~siSDfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V 283 (1118)
T KOG1275|consen 207 FETIHTFD--AHSGSISDFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAV 283 (1118)
T ss_pred Cceeeeee--ccccceeeeeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEE
Confidence 34455555 68889999988999999887 4667999999988777665555444 56788885 457888
Q ss_pred ecCCCcEEEEE---eCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 72 CSDDGSIAIFR---VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 72 ~~~d~~i~~~d---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
++..|...+-| +.+......+..+. +..+..++++++++.++.+..+|.|.+|.
T Consensus 284 ~S~sGq~q~vd~~~lsNP~~~~~~v~p~-~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 284 TSQSGQFQFVDTATLSNPPAGVKMVNPN-GSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred EecccceeeccccccCCCccceeEEccC-CCcceeEEecCCCceEEEecccCcEeeec
Confidence 88899999988 43332222221222 23389999999999999999999999997
No 278
>KOG4190|consensus
Probab=98.61 E-value=2.1e-07 Score=64.36 Aligned_cols=128 Identities=14% Similarity=0.211 Sum_probs=91.8
Q ss_pred EEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEe--cCCCeEEEEECC--CCCEE-EEecCCCcE
Q psy11518 6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQ--HEGTITCLKFTP--EGSHL-ISCSDDGSI 78 (139)
Q Consensus 6 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~--~~~~v~~~~~~~--~~~~l-~~~~~d~~i 78 (139)
..|..+.|..+|.++.+ +.++++ +.|+-|++||+--++++..... ..+.+..+..-+ +...+ +.++...++
T Consensus 776 CQfTY~aHkk~i~~igfL~~lr~i~--ScD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTV 853 (1034)
T KOG4190|consen 776 CQFTYQAHKKPIHDIGFLADLRSIA--SCDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTV 853 (1034)
T ss_pred eeeEhhhccCcccceeeeeccceee--eccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhh
Confidence 45666788888999888 444554 5688999999988877764321 122333333333 34444 444778899
Q ss_pred EEEEeCCceEEEEEEeCCCC---cceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 79 AIFRVGSWQLEKLFKKAHKG---TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
+++|.+..+....+...... .-+.+++..+.|++++.+=..|.|.+.|.++|+.+..
T Consensus 854 Kl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINs 913 (1034)
T KOG4190|consen 854 KLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINS 913 (1034)
T ss_pred eeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceecc
Confidence 99999988876666443222 2378999999999999999999999999999997764
No 279
>KOG1912|consensus
Probab=98.60 E-value=7.5e-07 Score=63.63 Aligned_cols=127 Identities=16% Similarity=0.217 Sum_probs=94.4
Q ss_pred EEeecceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCC------------CEEEEecC
Q psy11518 8 FVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEG------------SHLISCSD 74 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------~~l~~~~~ 74 (139)
+....+...-.++.| .+.+++-|+ ...|.+-|..+.+.+..+..|...|+.+.|.|.. -.+|+++.
T Consensus 9 lpG~l~~sN~~A~Dw~~~GLiAygs-hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~ 87 (1062)
T KOG1912|consen 9 LPGPLSRSNRNAADWSPSGLIAYGS-HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADI 87 (1062)
T ss_pred CCCCCCcccccccccCccceEEEec-CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccc
Confidence 333334444555666 344555555 4678899999999999999999999999998731 14678888
Q ss_pred CCcEEEEEeCCceEEEEEEeCCCCcceeEEEEcc---CC-cEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 75 DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP---SG-KLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 75 d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~---~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.|.|.+||...+..+..+ .+...++..++|-+ +. ..+++......+.+||..+|+....+.
T Consensus 88 ~GrIil~d~~~~s~~~~l--~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ 152 (1062)
T KOG1912|consen 88 SGRIILVDFVLASVINWL--SHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYD 152 (1062)
T ss_pred cCcEEEEEehhhhhhhhh--cCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccc
Confidence 999999999988777776 33333488888876 33 467777888899999999999887654
No 280
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.59 E-value=5.6e-06 Score=56.43 Aligned_cols=96 Identities=13% Similarity=0.152 Sum_probs=75.7
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCC----cEEEEEeCCceEEEEEEe
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG----SIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~~~d~~~~~~~~~~~~ 94 (139)
.++++|++++++.....+.+.|++++.....-+...+-|+...|+|+++++|-+-.+| .|+++|..+++......
T Consensus 408 ~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT- 486 (668)
T COG4946 408 KVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTT- 486 (668)
T ss_pred EEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecC-
Confidence 3445999999999999999999999988777667778899999999999999887776 48999999877665541
Q ss_pred CCCCcceeEEEEccCCcEEEEEc
Q psy11518 95 AHKGTAVNHISIHPSGKLALSVG 117 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l~~~~ 117 (139)
+. .. -.+-+|.|++++|.--+
T Consensus 487 ~t-a~-DfsPaFD~d~ryLYfLs 507 (668)
T COG4946 487 PT-AY-DFSPAFDPDGRYLYFLS 507 (668)
T ss_pred Cc-cc-ccCcccCCCCcEEEEEe
Confidence 21 11 35578999999776443
No 281
>KOG3621|consensus
Probab=98.58 E-value=9e-07 Score=62.31 Aligned_cols=116 Identities=13% Similarity=0.100 Sum_probs=86.4
Q ss_pred eeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEE-ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEE
Q psy11518 14 TASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 14 ~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 92 (139)
....+|+.-.+++++.|+..|.+.+|+-..+.....-. +-.+.+..+..+++..++|.|+..|.|.++.++...+....
T Consensus 35 ~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~ 114 (726)
T KOG3621|consen 35 RVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLD 114 (726)
T ss_pred eEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCcce
Confidence 34566777789999999999999999976665443322 23344556678888888999999999999988764322111
Q ss_pred --E--eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 93 --K--KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 93 --~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
. ...+...|++++|++++..+++|...|+|..-.+.+
T Consensus 115 ~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 115 YVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred eeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 1 111244599999999999999999999999887766
No 282
>PRK04792 tolB translocation protein TolB; Provisional
Probab=98.57 E-value=9.7e-06 Score=56.12 Aligned_cols=112 Identities=20% Similarity=0.237 Sum_probs=70.6
Q ss_pred EEEecCCcEEEE-eCCCC--eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec-CCC--cEEEEEeCCceEEEE
Q psy11518 18 RSVAATSKLAAS-SGADE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS-DDG--SIAIFRVGSWQLEKL 91 (139)
Q Consensus 18 ~~~~~~~~~l~~-~~~~~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~--~i~~~d~~~~~~~~~ 91 (139)
..++++|+.|+. ...++ .|.++|+.+++. ..+..+.......+|+|+++.++..+ .++ .|.++|+.+++....
T Consensus 267 ~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~~~L 345 (448)
T PRK04792 267 PRFSPDGKKLALVLSKDGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKVSRL 345 (448)
T ss_pred eeECCCCCEEEEEEeCCCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEE
Confidence 345568887764 45555 477778876654 33444545567789999999876543 344 466677777665443
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcC-CC--eEEEEEcCCCcee
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGK-DK--TLRTWNLVKGRSA 133 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~i~d~~~~~~~ 133 (139)
. .. ... ....+|+|||++++..+. ++ .|.++|+.+++..
T Consensus 346 t-~~-g~~-~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~~ 387 (448)
T PRK04792 346 T-FE-GEQ-NLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAMQ 387 (448)
T ss_pred e-cC-CCC-CcCeeECCCCCEEEEEEecCCceEEEEEECCCCCeE
Confidence 3 11 111 345789999998877654 33 4666788877653
No 283
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.55 E-value=2.6e-05 Score=49.76 Aligned_cols=84 Identities=14% Similarity=0.230 Sum_probs=56.6
Q ss_pred CCCeEEEEECCCCCEEEEecCC-C----------cEEEEEeCCceEE---------------------EEE------EeC
Q psy11518 54 EGTITCLKFTPEGSHLISCSDD-G----------SIAIFRVGSWQLE---------------------KLF------KKA 95 (139)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d-~----------~i~~~d~~~~~~~---------------------~~~------~~~ 95 (139)
...|.++.|+|..++|+.|+.. . -+..|.+-++.+- ... ...
T Consensus 147 p~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~ 226 (282)
T PF15492_consen 147 PHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDSPYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQG 226 (282)
T ss_pred CCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCCCcEEEccccCccccccccccceeeccceeeeeccc
Confidence 4478899999988888766531 1 2556665322110 000 011
Q ss_pred CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 96 HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.....|..|..+|||+.|++...+|.|.+|++.+-+.+....
T Consensus 227 ~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W~ 268 (282)
T PF15492_consen 227 QEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSWK 268 (282)
T ss_pred cCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhcccc
Confidence 123338999999999999999999999999998877665543
No 284
>KOG4640|consensus
Probab=98.55 E-value=9.7e-07 Score=61.51 Aligned_cols=91 Identities=14% Similarity=0.089 Sum_probs=72.7
Q ss_pred eeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeE-EEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTIT-CLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.....+.|.-.++|.+..+|.|.+..+. .+.+.+++.+...++ +++|.|+|+.+|.|-.||+|++.|+.++..+....
T Consensus 23 i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~ 101 (665)
T KOG4640|consen 23 IKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFL 101 (665)
T ss_pred eEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceeccc
Confidence 3445555677789999999999999987 778888887777777 99999999999999999999999999887766642
Q ss_pred eCCCCcceeEEEEc
Q psy11518 94 KAHKGTAVNHISIH 107 (139)
Q Consensus 94 ~~~~~~~v~~~~~~ 107 (139)
.....+|..+-|.
T Consensus 102 -~s~e~~is~~~w~ 114 (665)
T KOG4640|consen 102 -FSVETDISKGIWD 114 (665)
T ss_pred -cccccchheeecc
Confidence 2222336777775
No 285
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.53 E-value=4.2e-06 Score=52.83 Aligned_cols=114 Identities=11% Similarity=0.038 Sum_probs=78.4
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCC-CCcc-
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH-KGTA- 100 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~- 100 (139)
++..+++++.++.|..||..+++.+..+.. ...+.... ...+..++.+..++.+..+|..+++.++...... ....
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~ 112 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGV 112 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCST
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eecccccccccceeeeEecccCCcceeeeecccccccccc
Confidence 677777778999999999999999888775 22211111 1244556666677899999999999998842222 1110
Q ss_pred eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
........++..++.+..++.|..+|+++|+.+....+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~ 150 (238)
T PF13360_consen 113 RSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPV 150 (238)
T ss_dssp B--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEES
T ss_pred ccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeec
Confidence 12222333477888888899999999999999877654
No 286
>KOG1832|consensus
Probab=98.53 E-value=5.8e-08 Score=70.16 Aligned_cols=119 Identities=12% Similarity=0.101 Sum_probs=91.5
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCc--EEEEEeCCce
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS--IAIFRVGSWQ 87 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~~~d~~~~~ 87 (139)
.+....+|+.| +.+.|+.|+..|.|++|++.+|........|.+.|+.+.-+.+|..+++.+.... ..+|+....
T Consensus 1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s~- 1177 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASST- 1177 (1516)
T ss_pred ccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccccc-
Confidence 45677788887 7889999999999999999999999999999999999999989988776655433 568987541
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
+...|.-..-.++.|+...+.-+.|.......+||+.++.++..
T Consensus 1178 ----~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~t 1221 (1516)
T KOG1832|consen 1178 ----GGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQT 1221 (1516)
T ss_pred ----cCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHH
Confidence 11222222246688887767677777777899999999877654
No 287
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.50 E-value=1.3e-05 Score=54.22 Aligned_cols=109 Identities=8% Similarity=-0.060 Sum_probs=76.7
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCccee
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 102 (139)
.+..+++++.++.+..+|.++++.+...... ...... ..+..++.++.+|.+..+|..+++.++......... ..
T Consensus 240 ~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~--~~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~-~s 314 (377)
T TIGR03300 240 DGGQVYAVSYQGRVAALDLRSGRVLWKRDAS--SYQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKNDELKYRQ-LT 314 (377)
T ss_pred ECCEEEEEEcCCEEEEEECCCCcEEEeeccC--CccCce--EeCCEEEEECCCCeEEEEECCCCcEEEccccccCCc-cc
Confidence 4557777888999999999999887765421 111222 245677788889999999999998877652111111 22
Q ss_pred EEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 103 HISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 103 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.... .+..+++++.+|.++++|..+++.+..+++
T Consensus 315 sp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~ 348 (377)
T TIGR03300 315 APAV--VGGYLVVGDFEGYLHWLSREDGSFVARLKT 348 (377)
T ss_pred cCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEc
Confidence 2222 356888899999999999999999887653
No 288
>KOG1354|consensus
Probab=98.49 E-value=4.3e-06 Score=54.74 Aligned_cols=125 Identities=20% Similarity=0.319 Sum_probs=85.3
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCcee---eEEEe-----cCCCeEEEEECC-CCCEEEEecCCCcEE
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS---GALMQ-----HEGTITCLKFTP-EGSHLISCSDDGSIA 79 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~---~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~d~~i~ 79 (139)
+.|...+.+++. |.+.++++. |-.|.+|+++-...- ...+. -..-|++..|+| ..+.++-.+..|.|+
T Consensus 161 NaHtyhiNSIS~NsD~Et~lSAD-dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIr 239 (433)
T KOG1354|consen 161 NAHTYHINSISVNSDKETFLSAD-DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIR 239 (433)
T ss_pred ccceeEeeeeeecCccceEeecc-ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEE
Confidence 468888999998 666666654 678999998643221 11121 234578888999 467788888899999
Q ss_pred EEEeCCceEEE----EEEeCC----------CCcceeEEEEccCCcEEEEEcCCCeEEEEEc-CCCceeEEEe
Q psy11518 80 IFRVGSWQLEK----LFKKAH----------KGTAVNHISIHPSGKLALSVGKDKTLRTWNL-VKGRSAYITN 137 (139)
Q Consensus 80 ~~d~~~~~~~~----~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~ 137 (139)
+-|++...+-. .+..+. --..|..+.|+++|+++++-.. -+|.+||+ ...+++..+.
T Consensus 240 LcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~ 311 (433)
T KOG1354|consen 240 LCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYP 311 (433)
T ss_pred EeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEe
Confidence 99998543211 111111 1123889999999999987664 47999999 6667766554
No 289
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=98.48 E-value=1.9e-05 Score=53.37 Aligned_cols=108 Identities=15% Similarity=0.099 Sum_probs=77.6
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCccee
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 102 (139)
.+..+++++.++.|..+|..+++.+............... ++..++.++.++.+..+|..+++.++....... +.
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~---~~ 138 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVGA--DGGLVFVGTEKGEVIALDAEDGKELWRAKLSSE---VL 138 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceEE--cCCEEEEEcCCCEEEEEECCCCcEeeeeccCce---ee
Confidence 5778888889999999999999988776543322122222 466778888899999999999998887633221 21
Q ss_pred E-EEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 103 H-ISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 103 ~-~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+ ... .+..++.++.++.+..||.++|+.+....
T Consensus 139 ~~p~v--~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 172 (377)
T TIGR03300 139 SPPLV--ANGLVVVRTNDGRLTALDAATGERLWTYS 172 (377)
T ss_pred cCCEE--ECCEEEEECCCCeEEEEEcCCCceeeEEc
Confidence 1 112 34567777889999999999998876653
No 290
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=98.47 E-value=0.00011 Score=49.24 Aligned_cols=117 Identities=12% Similarity=0.232 Sum_probs=78.3
Q ss_pred eeEEEEecCCcEEEEeCC----CCeEEEEEccCC----ceeeEEEecCCCeEEEEECCCCCEEEEec-CCCcEEEEEeCC
Q psy11518 15 ASVRSVAATSKLAASSGA----DETVVLYDMVKR----KQSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFRVGS 85 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~----~~~v~i~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~ 85 (139)
..-.++.+++++|++..+ ++.|..|.+... +.+............++++|++++++++. .+|.+.++++..
T Consensus 39 Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~ 118 (345)
T PF10282_consen 39 PSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDD 118 (345)
T ss_dssp ECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECT
T ss_pred CceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccC
Confidence 344556668888888766 579999998764 23333443445567899999999998776 488999999987
Q ss_pred -ceEEEEEE-eC----------CCCcceeEEEEccCCcEEEEEc-CCCeEEEEEcCCCc
Q psy11518 86 -WQLEKLFK-KA----------HKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGR 131 (139)
Q Consensus 86 -~~~~~~~~-~~----------~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~ 131 (139)
+....... .. ....-+.++.++|+++++++.. ....|.+|++....
T Consensus 119 ~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~ 177 (345)
T PF10282_consen 119 DGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDT 177 (345)
T ss_dssp TSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS
T ss_pred CcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCC
Confidence 44333211 10 1222277899999999887764 35579999998765
No 291
>KOG1645|consensus
Probab=98.45 E-value=1.8e-06 Score=57.34 Aligned_cols=94 Identities=14% Similarity=0.067 Sum_probs=71.6
Q ss_pred EEEEEccCCceeeEEEecCCCeEEEEECCCCC-EEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCc-EE
Q psy11518 36 VVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK-LA 113 (139)
Q Consensus 36 v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 113 (139)
+++.+..+.+...-+..+...|..++|+|..+ ++..++.+..|++.|+++......+ ..+ .++++++|.-|.. ++
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy-~a~--~~~wSC~wDlde~h~I 251 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSY-IAY--NQIWSCCWDLDERHVI 251 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceeeehe-ecc--CCceeeeeccCCccee
Confidence 44444444444445566778899999999766 6778899999999999998887777 344 3389999998766 66
Q ss_pred EEEcCCCeEEEEEcCCCce
Q psy11518 114 LSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 114 ~~~~~d~~i~i~d~~~~~~ 132 (139)
..|-..|.|.|||+++.+.
T Consensus 252 YaGl~nG~VlvyD~R~~~~ 270 (463)
T KOG1645|consen 252 YAGLQNGMVLVYDMRQPEG 270 (463)
T ss_pred EEeccCceEEEEEccCCCc
Confidence 6677899999999997643
No 292
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.44 E-value=1.5e-06 Score=38.10 Aligned_cols=38 Identities=37% Similarity=0.675 Sum_probs=33.2
Q ss_pred ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
++...+..|...+.++.|++++..+++++.|+.+++|+
T Consensus 3 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 3 ELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 44566777888999999999989999999999999986
No 293
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.40 E-value=0.00019 Score=49.43 Aligned_cols=112 Identities=14% Similarity=0.133 Sum_probs=70.8
Q ss_pred EEEecCCcE-EEE-eCC--CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCC--CcEEEEEeCCceEEE
Q psy11518 18 RSVAATSKL-AAS-SGA--DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDD--GSIAIFRVGSWQLEK 90 (139)
Q Consensus 18 ~~~~~~~~~-l~~-~~~--~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d--~~i~~~d~~~~~~~~ 90 (139)
..++++|+. ++. ... +..|.++|+.+++...... ..+......|+|+|+.++ +.+.+ ..|.++|+..+....
T Consensus 193 p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~~ 271 (419)
T PRK04043 193 PKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLTQ 271 (419)
T ss_pred EEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEEE
Confidence 445558874 443 332 4679999998876544333 445556778999998775 34333 468888887776544
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcC-C--CeEEEEEcCCCcee
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGK-D--KTLRTWNLVKGRSA 133 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d--~~i~i~d~~~~~~~ 133 (139)
.. ..... .....|+|||+.|+..+. . ..|.+.|+.+++..
T Consensus 272 LT--~~~~~-d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~ 314 (419)
T PRK04043 272 IT--NYPGI-DVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVE 314 (419)
T ss_pred cc--cCCCc-cCccEECCCCCEEEEEECCCCCceEEEEECCCCCeE
Confidence 33 22221 334679999987766553 2 26888888877653
No 294
>KOG3617|consensus
Probab=98.38 E-value=1.5e-06 Score=62.94 Aligned_cols=112 Identities=12% Similarity=0.185 Sum_probs=84.6
Q ss_pred eeeEEEEecCCcEEEEeC----CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 14 TASVRSVAATSKLAASSG----ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 14 ~~~v~~~~~~~~~l~~~~----~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
...+.++.|..+++++++ ..|+|.||- ++|++...... .-.+++++|+|..-.|+.|-.-|.+.+|.....+.-
T Consensus 17 vsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~-P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~h 94 (1416)
T KOG3617|consen 17 VSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTY-PVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETH 94 (1416)
T ss_pred cccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccccc-ceehhhhccChHHHHHhhccccceeEEEecCCceee
Confidence 345666777888888775 578899885 67765443321 123467999999888999999999999997665443
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
.....|... +..+.|+++|..++++..-|.+.+|....
T Consensus 95 -tv~~th~a~-i~~l~wS~~G~~l~t~d~~g~v~lwr~d~ 132 (1416)
T KOG3617|consen 95 -TVVETHPAP-IQGLDWSHDGTVLMTLDNPGSVHLWRYDV 132 (1416)
T ss_pred -eeccCCCCC-ceeEEecCCCCeEEEcCCCceeEEEEeee
Confidence 332445544 99999999999999999999999998864
No 295
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=98.38 E-value=9.6e-05 Score=56.23 Aligned_cols=114 Identities=10% Similarity=0.103 Sum_probs=76.8
Q ss_pred EEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEec---------------CCCeEEEEECCCCCEE-EEecCCCcEEEE
Q psy11518 19 SVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQH---------------EGTITCLKFTPEGSHL-ISCSDDGSIAIF 81 (139)
Q Consensus 19 ~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l-~~~~~d~~i~~~ 81 (139)
++.+ ++.++++...++.|++||..++... .+.+. -.....++++|++..+ ++-..++.|++|
T Consensus 689 a~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~ 767 (1057)
T PLN02919 689 CFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSSIRAL 767 (1057)
T ss_pred EEecCCCeEEEEECCCCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCeEEEE
Confidence 4445 5666777788899999998776432 22110 1234678999998854 555667899999
Q ss_pred EeCCceEEEEEE-----------eCCC--------CcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 82 RVGSWQLEKLFK-----------KAHK--------GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 82 d~~~~~~~~~~~-----------~~~~--------~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
|+.++....... .... ......++++++|..+++-..+++|++||..++...
T Consensus 768 D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~ 838 (1057)
T PLN02919 768 DLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVT 838 (1057)
T ss_pred ECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEE
Confidence 988765322110 0000 012568999999999999999999999999876554
No 296
>KOG2315|consensus
Probab=98.36 E-value=2.1e-05 Score=54.27 Aligned_cols=99 Identities=17% Similarity=0.271 Sum_probs=70.8
Q ss_pred CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEe--cCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCC
Q psy11518 33 DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC--SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG 110 (139)
Q Consensus 33 ~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 110 (139)
..++++.+++.......+. ..++|.++.|+|+++-++.+ -.=..+.+||++ +.++..+ ..++-.++-|+|.|
T Consensus 250 Eq~Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df----~egpRN~~~fnp~g 323 (566)
T KOG2315|consen 250 EQTLYLLATQGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDF----PEGPRNTAFFNPHG 323 (566)
T ss_pred cceEEEEEecCceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeC----CCCCccceEECCCC
Confidence 3467777766333333332 46899999999999877543 445679999986 5566555 22235779999999
Q ss_pred cEEEEEcC---CCeEEEEEcCCCceeEEEe
Q psy11518 111 KLALSVGK---DKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 111 ~~l~~~~~---d~~i~i~d~~~~~~~~~~~ 137 (139)
++++.+|. .|.+.|||..+.+.+..+.
T Consensus 324 ~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~ 353 (566)
T KOG2315|consen 324 NIILLAGFGNLPGDMEVWDVPNRKLIAKFK 353 (566)
T ss_pred CEEEEeecCCCCCceEEEeccchhhccccc
Confidence 99998875 5889999999987776554
No 297
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=98.32 E-value=3.8e-05 Score=57.50 Aligned_cols=114 Identities=11% Similarity=0.154 Sum_probs=78.1
Q ss_pred eEEEEec--CCcEEEEeCC------CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC---CCcEEEEEeC
Q psy11518 16 SVRSVAA--TSKLAASSGA------DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD---DGSIAIFRVG 84 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~------~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~ 84 (139)
.-..++| ||.++|+.+- -..++||+- .|....+...-.+--.+++|.|.|+++|+.-. ...|.+|. +
T Consensus 211 ~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~R-eG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfE-r 288 (928)
T PF04762_consen 211 GRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSR-EGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFE-R 288 (928)
T ss_pred CceEEEECCCCcEEEEEEEEcCCCceeEEEEECC-CceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEe-c
Confidence 3445666 9999998763 258999984 46544444333333457899999999987755 23355555 5
Q ss_pred CceEEEEEEeC--CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 85 SWQLEKLFKKA--HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 85 ~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
+|.....+... .....+..+.|++++..|+..-.|. |.+|-..+...
T Consensus 289 NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHW 337 (928)
T PF04762_consen 289 NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHW 337 (928)
T ss_pred CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEE
Confidence 55554555333 3344589999999999999877665 99998887654
No 298
>KOG2695|consensus
Probab=98.28 E-value=2.9e-06 Score=55.51 Aligned_cols=100 Identities=14% Similarity=0.259 Sum_probs=74.6
Q ss_pred EEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce-----EEEEEEeCCCCccee
Q psy11518 28 ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ-----LEKLFKKAHKGTAVN 102 (139)
Q Consensus 28 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-----~~~~~~~~~~~~~v~ 102 (139)
++.+.+..+-+-+++++-... |. ..+.|.+++|...++++..|..+|.|..+|++... +...+ -|.. .|+
T Consensus 228 fs~G~sqqv~L~nvetg~~qs-f~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl--yh~S-svt 302 (425)
T KOG2695|consen 228 FSVGLSQQVLLTNVETGHQQS-FQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL--YHDS-SVT 302 (425)
T ss_pred ecccccceeEEEEeecccccc-cc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE--EcCc-chh
Confidence 445556778888888774322 22 45678899999889999999999999999997641 22222 2333 388
Q ss_pred EEEEcc-CCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 103 HISIHP-SGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 103 ~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
++..-. ++++|++.+.+|+|.+||+|--+.
T Consensus 303 slq~Lq~s~q~LmaS~M~gkikLyD~R~~K~ 333 (425)
T KOG2695|consen 303 SLQILQFSQQKLMASDMTGKIKLYDLRATKC 333 (425)
T ss_pred hhhhhccccceEeeccCcCceeEeeehhhhc
Confidence 887666 788999999999999999986655
No 299
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.27 E-value=0.00025 Score=44.72 Aligned_cols=107 Identities=13% Similarity=0.076 Sum_probs=73.6
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCC----------eEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT----------ITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~----------v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 92 (139)
.++.++++..++.|..+|+++++.+......... +..-....++ .+..+..++.+..+|+.+++.....
T Consensus 121 ~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~d~~tg~~~w~~ 199 (238)
T PF13360_consen 121 DGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSPISSFSDINGSPVISDG-RVYVSSGDGRVVAVDLATGEKLWSK 199 (238)
T ss_dssp ETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--EEEETTEEEEEECCTT-EEEEECCTSSEEEEETTTTEEEEEE
T ss_pred ecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcceeeecccccceEEECC-EEEEEcCCCeEEEEECCCCCEEEEe
Confidence 5778888888999999999999998887764322 1122222344 6666777776444499999977533
Q ss_pred EeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
. ... +... ...++..++.++.++.+..||+++++.+.+
T Consensus 200 --~-~~~-~~~~-~~~~~~~l~~~~~~~~l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 200 --P-ISG-IYSL-PSVDGGTLYVTSSDGRLYALDLKTGKVVWQ 237 (238)
T ss_dssp --C-SS--ECEC-EECCCTEEEEEETTTEEEEEETTTTEEEEE
T ss_pred --c-CCC-ccCC-ceeeCCEEEEEeCCCEEEEEECCCCCEEeE
Confidence 2 222 3321 345677777777999999999999998865
No 300
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.26 E-value=0.0003 Score=48.46 Aligned_cols=111 Identities=14% Similarity=0.157 Sum_probs=69.4
Q ss_pred EEEEecCCcEEE-EeCC--CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec-CCC--cEEEEEeCCceEEE
Q psy11518 17 VRSVAATSKLAA-SSGA--DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS-DDG--SIAIFRVGSWQLEK 90 (139)
Q Consensus 17 v~~~~~~~~~l~-~~~~--~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~--~i~~~d~~~~~~~~ 90 (139)
...+++||+.++ +.+. +..|.++|+.+++. ..+..+........|+|+|+.++-.+ ..+ .|.+.|+.+++...
T Consensus 237 ~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~r 315 (419)
T PRK04043 237 VSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQ 315 (419)
T ss_pred eeEECCCCCEEEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEe
Confidence 345667887665 3333 35677778777653 33443333334568999998776443 333 57788888777654
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCC---------CeEEEEEcCCCcee
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKD---------KTLRTWNLVKGRSA 133 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~ 133 (139)
... . +. ....|+|+|+.++..... ..|.+.|+.++...
T Consensus 316 lt~-~--g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~~ 362 (419)
T PRK04043 316 VVF-H--GK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYIR 362 (419)
T ss_pred Ccc-C--CC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCeE
Confidence 442 1 11 124899999988766532 36888898887653
No 301
>KOG2314|consensus
Probab=98.26 E-value=3.4e-05 Score=53.57 Aligned_cols=112 Identities=9% Similarity=0.126 Sum_probs=82.6
Q ss_pred eeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCC-----------CcEEEEEe
Q psy11518 15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD-----------GSIAIFRV 83 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~~~d~ 83 (139)
.....++|.|.+|++-..-| |.+|-=++-..++.|. |. .|.-+.|||+.+||+|-+.. ..+.+||+
T Consensus 213 etyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF~-Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI 289 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRFY-HP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDI 289 (698)
T ss_pred eeeEEecCCceEEEEEeccc-eeeecCccHHHHHhcc-CC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEc
Confidence 35566777899999887766 7778766656666664 54 57889999999999987542 46899999
Q ss_pred CCceEEEEEEeCCCCcce-eEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 84 GSWQLEKLFKKAHKGTAV-NHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
.+|.....+........+ .-..||.|+++++....+ .|.||+..+-
T Consensus 290 ~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~-sisIyEtpsf 336 (698)
T KOG2314|consen 290 ATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGN-SISIYETPSF 336 (698)
T ss_pred cccchhcceeccCCCccccceEEeccCCceeEEeccc-eEEEEecCce
Confidence 999988888553332222 346899999999988874 5888877653
No 302
>KOG1334|consensus
Probab=98.21 E-value=9.3e-07 Score=59.92 Aligned_cols=78 Identities=17% Similarity=0.235 Sum_probs=67.0
Q ss_pred EEeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 8 FVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
|+.+.....|..+.| ..+++++|+..|.|-||+-.+++.+..+.+...-|+|+.-+|--..||+++-|..|+||-..
T Consensus 387 YKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~ 466 (559)
T KOG1334|consen 387 YKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPL 466 (559)
T ss_pred hcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCC
Confidence 565555567888877 57899999999999999999999888888777789999999998999999999999999864
Q ss_pred C
Q psy11518 85 S 85 (139)
Q Consensus 85 ~ 85 (139)
+
T Consensus 467 ~ 467 (559)
T KOG1334|consen 467 T 467 (559)
T ss_pred c
Confidence 3
No 303
>KOG1275|consensus
Probab=98.17 E-value=2.6e-05 Score=56.93 Aligned_cols=106 Identities=17% Similarity=0.327 Sum_probs=81.8
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCccee
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 102 (139)
++..++.|+.-..+..+|+.+.+......-..+.|.-+.. +++.+.+|...|+|.+-|.++.+.+..+ ..|.+. +.
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~--Nnr~lf~G~t~G~V~LrD~~s~~~iht~-~aHs~s-iS 221 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMRY--NNRNLFCGDTRGTVFLRDPNSFETIHTF-DAHSGS-IS 221 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEEe--cCcEEEeecccceEEeecCCcCceeeee-eccccc-ee
Confidence 5666777777777888898888776665544445555554 7789999999999999999999999998 677766 76
Q ss_pred EEEEccCCcEEEEEcC---------CCeEEEEEcCCCceeE
Q psy11518 103 HISIHPSGKLALSVGK---------DKTLRTWNLVKGRSAY 134 (139)
Q Consensus 103 ~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~~ 134 (139)
++. -.|+.|+++|. |..|.+||+|.-+.+.
T Consensus 222 DfD--v~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~ 260 (1118)
T KOG1275|consen 222 DFD--VQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALS 260 (1118)
T ss_pred eee--ccCCeEEEeecccccccccccchhhhhhhhhhhccC
Confidence 554 56888988873 7779999999876554
No 304
>KOG2066|consensus
Probab=98.17 E-value=1.3e-05 Score=57.58 Aligned_cols=99 Identities=22% Similarity=0.242 Sum_probs=73.6
Q ss_pred eeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEe
Q psy11518 15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 94 (139)
..+.|+.+.+++++-|+.+|.|++++.... + .+...|... ..+|.++++|+.||.+.+..+.+.+....+..
T Consensus 40 D~is~~av~~~~~~~GtH~g~v~~~~~~~~-~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df 111 (846)
T KOG2066|consen 40 DAISCCAVHDKFFALGTHRGAVYLTTCQGN-P-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYDF 111 (846)
T ss_pred hHHHHHHhhcceeeeccccceEEEEecCCc-c-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEec
Confidence 445666678999999999999999986433 2 222234332 55899999999999999999888776665522
Q ss_pred CCCCcceeEEEEccC-----CcEEEEEcCCCeEEEE
Q psy11518 95 AHKGTAVNHISIHPS-----GKLALSVGKDKTLRTW 125 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~-----~~~l~~~~~d~~i~i~ 125 (139)
..++-+++++|+ .+.+++||..| +.++
T Consensus 112 ---~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~ 143 (846)
T KOG2066|consen 112 ---KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLS 143 (846)
T ss_pred ---CCcceeEEeccchhhhhhhheeecCcce-EEEe
Confidence 223888999997 46788998887 6555
No 305
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.17 E-value=2e-05 Score=34.24 Aligned_cols=27 Identities=30% Similarity=0.672 Sum_probs=25.1
Q ss_pred ceeEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 100 AVNHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 100 ~v~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
.+.+++|++++.++++++.|+.+++|+
T Consensus 14 ~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 14 PVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred ceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 399999999999999999999999996
No 306
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.17 E-value=0.00049 Score=49.16 Aligned_cols=93 Identities=14% Similarity=0.151 Sum_probs=67.6
Q ss_pred CCeEEEEEccC-----CceeeEEEecCCCeEEEEECCCCCEEEEecC-CCcEEEEEeCCceE------------EEEEEe
Q psy11518 33 DETVVLYDMVK-----RKQSGALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQL------------EKLFKK 94 (139)
Q Consensus 33 ~~~v~i~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~~------------~~~~~~ 94 (139)
++.|.+.|..+ .+.+..+. -......+.++|+|+++++++. +..+.+.|+.+.+. ....
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaev-- 371 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEP-- 371 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEee--
Confidence 46788888877 33444444 3345588999999999875554 88999999977542 2222
Q ss_pred CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 95 AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
..+......+|.++|..+.+-.-|.+|..||+.+
T Consensus 372 -evGlGPLHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 372 -ELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred -ccCCCcceEEECCCCCEEEeEeecceeEEEehHH
Confidence 1222267889999999888888999999999876
No 307
>KOG2314|consensus
Probab=98.16 E-value=1.5e-05 Score=55.22 Aligned_cols=76 Identities=24% Similarity=0.453 Sum_probs=60.9
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcC-----------CCeEEEE
Q psy11518 57 ITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-----------DKTLRTW 125 (139)
Q Consensus 57 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------d~~i~i~ 125 (139)
=+-+.|||.|.||++--..| |.+|--.+...+..+ .|.+ |.-+.|||+.++|++=+. ...+.||
T Consensus 213 etyv~wSP~GTYL~t~Hk~G-I~lWGG~~f~r~~RF--~Hp~--Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IW 287 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQG-IALWGGESFDRIQRF--YHPG--VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIW 287 (698)
T ss_pred eeeEEecCCceEEEEEeccc-eeeecCccHHHHHhc--cCCC--ceeeecCCccceEEEecCCccccCcccCCCceEEEE
Confidence 36789999999999998877 889987776666665 3443 788999999999998652 2579999
Q ss_pred EcCCCceeEEEe
Q psy11518 126 NLVKGRSAYITN 137 (139)
Q Consensus 126 d~~~~~~~~~~~ 137 (139)
|+++|.....+.
T Consensus 288 DI~tG~lkrsF~ 299 (698)
T KOG2314|consen 288 DIATGLLKRSFP 299 (698)
T ss_pred Eccccchhccee
Confidence 999998877654
No 308
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=98.16 E-value=0.00064 Score=45.17 Aligned_cols=113 Identities=13% Similarity=0.099 Sum_probs=71.8
Q ss_pred cceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCc-eeeEE-EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC-ce
Q psy11518 12 SHTASVRSVAA-TSKLAASSGADETVVLYDMVKRK-QSGAL-MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS-WQ 87 (139)
Q Consensus 12 ~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~-~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~ 87 (139)
...++|.++.. ++.++++. ++.|.+|++...+ ....- ......+.++.. .+++++.|+....+.++..+. ..
T Consensus 86 ~~~g~V~ai~~~~~~lv~~~--g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~--~~~~I~vgD~~~sv~~~~~~~~~~ 161 (321)
T PF03178_consen 86 EVKGPVTAICSFNGRLVVAV--GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSV--FKNYILVGDAMKSVSLLRYDEENN 161 (321)
T ss_dssp EESS-EEEEEEETTEEEEEE--TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEE--ETTEEEEEESSSSEEEEEEETTTE
T ss_pred eecCcceEhhhhCCEEEEee--cCEEEEEEccCcccchhhheecceEEEEEEec--cccEEEEEEcccCEEEEEEEccCC
Confidence 34677888887 66644444 3889999998877 33222 122235555554 456899998877888775543 33
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
....+........+.++.+-++++.++.+..+|.+.++...
T Consensus 162 ~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 162 KLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp -EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred EEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 23333333333348888888777789999999999999876
No 309
>KOG4649|consensus
Probab=98.14 E-value=0.00029 Score=44.98 Aligned_cols=111 Identities=13% Similarity=0.068 Sum_probs=83.1
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCccee
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 102 (139)
...+++.|+..+.+.--|+.+++...+-. -..++.+-+.- -|.+++.|+..|.+.+.+..++...+.+.....-. +
T Consensus 22 skT~v~igSHs~~~~avd~~sG~~~We~i-lg~RiE~sa~v-vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk-~- 97 (354)
T KOG4649|consen 22 SKTLVVIGSHSGIVIAVDPQSGNLIWEAI-LGVRIECSAIV-VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVK-V- 97 (354)
T ss_pred CceEEEEecCCceEEEecCCCCcEEeehh-hCceeeeeeEE-ECCEEEEEEccCcEEEEEecchhheeeeeehhhhc-c-
Confidence 35678899999999999999998765532 12233332222 46679999999999999999998888874444322 2
Q ss_pred EEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 103 HISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 103 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.....+++..+..++.|+..+..|.++...++..+
T Consensus 98 ~a~~d~~~glIycgshd~~~yalD~~~~~cVyksk 132 (354)
T KOG4649|consen 98 RAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSK 132 (354)
T ss_pred ceEEcCCCceEEEecCCCcEEEecccccceEEecc
Confidence 24457789999999999999999999988887644
No 310
>KOG2079|consensus
Probab=98.10 E-value=4.9e-05 Score=56.44 Aligned_cols=111 Identities=20% Similarity=0.260 Sum_probs=76.7
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEEccCC-ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEe
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYDMVKR-KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 94 (139)
.+...+..+..++.|+..|.+...|.... .+...=..-.++|++++|+.+|+.++.|-.+|.|.+||...++....+..
T Consensus 91 ~v~s~a~~~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e 170 (1206)
T KOG2079|consen 91 GVISSAIVVVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITE 170 (1206)
T ss_pred ceeeeeeeeeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeee
Confidence 34444446667888998999998887553 22222223467899999999999999999999999999999887776632
Q ss_pred C-CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 95 A-HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 95 ~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
. ++...+..+.+..++..++++...|. +|.+.
T Consensus 171 ~~ap~t~vi~v~~t~~nS~llt~D~~Gs--f~~lv 203 (1206)
T KOG2079|consen 171 HGAPVTGVIFVGRTSQNSKLLTSDTGGS--FWKLV 203 (1206)
T ss_pred cCCccceEEEEEEeCCCcEEEEccCCCc--eEEEE
Confidence 2 22222444455556667777777775 56543
No 311
>KOG1912|consensus
Probab=98.08 E-value=0.00011 Score=53.19 Aligned_cols=100 Identities=13% Similarity=0.227 Sum_probs=78.1
Q ss_pred EEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC---CC-CEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcce
Q psy11518 26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP---EG-SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV 101 (139)
Q Consensus 26 ~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~---~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v 101 (139)
+++++...|.|.+||+..+..+..+..|..++..+.|-+ +. ..|+.-.....+.+|+..+|+..+.+...+. ..
T Consensus 81 liAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~--iL 158 (1062)
T KOG1912|consen 81 LIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHE--IL 158 (1062)
T ss_pred eEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCc--ce
Confidence 578888999999999999988888888888899888865 33 3566666677899999999999998844443 26
Q ss_pred eEEEEcc-CCcEEEEEcCCCeEEEEEc
Q psy11518 102 NHISIHP-SGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 102 ~~~~~~~-~~~~l~~~~~d~~i~i~d~ 127 (139)
.++.+.| |.+.+..-+..|.+.+-+.
T Consensus 159 s~f~~DPfd~rh~~~l~s~g~vl~~~~ 185 (1062)
T KOG1912|consen 159 SCFRVDPFDSRHFCVLGSKGFVLSCKD 185 (1062)
T ss_pred eeeeeCCCCcceEEEEccCceEEEEec
Confidence 7788988 6676766666777666654
No 312
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=98.07 E-value=2.6e-05 Score=36.55 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=30.3
Q ss_pred cceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 99 TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 99 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
.+|..++|+|...+++.++.+|.|.+|.+ +++.+
T Consensus 12 ~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qri 45 (47)
T PF12894_consen 12 SRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQRI 45 (47)
T ss_pred CcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcCc
Confidence 34899999999999999999999999999 66654
No 313
>KOG0882|consensus
Probab=98.05 E-value=6.5e-05 Score=51.01 Aligned_cols=108 Identities=13% Similarity=0.138 Sum_probs=80.6
Q ss_pred EeCCCCeEEEEEccCCc-e-eeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC------ceEEEEE-------E
Q psy11518 29 SSGADETVVLYDMVKRK-Q-SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS------WQLEKLF-------K 93 (139)
Q Consensus 29 ~~~~~~~v~i~~~~~~~-~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~------~~~~~~~-------~ 93 (139)
..-.++.+.++|..... + ...-.-|.++|.++.++|.+..+.+....|.|..|.... ......+ .
T Consensus 117 s~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~ 196 (558)
T KOG0882|consen 117 SLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYG 196 (558)
T ss_pred ecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhc
Confidence 33467899999976543 2 333345899999999999999999999999999999763 1111111 1
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.........++.|+|++..+.+-+.|+.|+++++++++.++.+
T Consensus 197 f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqei 239 (558)
T KOG0882|consen 197 FPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEI 239 (558)
T ss_pred ccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhh
Confidence 1112223788999999999999999999999999999887654
No 314
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.05 E-value=7.2e-05 Score=48.75 Aligned_cols=115 Identities=22% Similarity=0.360 Sum_probs=76.9
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCc-----eeeEEEecC------------CCeEEEEECCC--CCEEEE
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRK-----QSGALMQHE------------GTITCLKFTPE--GSHLIS 71 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~-----~~~~~~~~~------------~~v~~~~~~~~--~~~l~~ 71 (139)
....|+++.| .|.++++|...|.|.+|.-+... ....|++|. ..|..+.|..+ ...++.
T Consensus 25 ead~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLl 104 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLL 104 (460)
T ss_pred ccceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEE
Confidence 3456788888 68899999999999999865432 223355553 35778887653 345666
Q ss_pred ecCCCcEEEEEeCCceE------------------------------------------EEEEEeCCCCcceeEEEEccC
Q psy11518 72 CSDDGSIAIFRVGSWQL------------------------------------------EKLFKKAHKGTAVNHISIHPS 109 (139)
Q Consensus 72 ~~~d~~i~~~d~~~~~~------------------------------------------~~~~~~~~~~~~v~~~~~~~~ 109 (139)
.+.|.+|++|.+..... .+.+...|.-. +.+++|+.|
T Consensus 105 stNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yh-iNSiS~NsD 183 (460)
T COG5170 105 STNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYH-INSISFNSD 183 (460)
T ss_pred ecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeE-eeeeeecCc
Confidence 77889999998754200 01111233333 788999988
Q ss_pred CcEEEEEcCCCeEEEEEcCC
Q psy11518 110 GKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 110 ~~~l~~~~~d~~i~i~d~~~ 129 (139)
.+.++++. |-+|.+|++.-
T Consensus 184 ~et~lSaD-dLrINLWnl~i 202 (460)
T COG5170 184 KETLLSAD-DLRINLWNLEI 202 (460)
T ss_pred hheeeecc-ceeeeeccccc
Confidence 88877664 66799998864
No 315
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.03 E-value=0.001 Score=42.48 Aligned_cols=122 Identities=17% Similarity=0.159 Sum_probs=79.0
Q ss_pred eeeEEEEec--CCcEEEEeCCC--------CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCcEEEEE
Q psy11518 14 TASVRSVAA--TSKLAASSGAD--------ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFR 82 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~~--------~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d 82 (139)
....+++.+ +|++.++.... +.|..++.. ++...... .-...+.++|+|+++.|. +-+..+.|..++
T Consensus 85 ~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~-~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~ 162 (246)
T PF08450_consen 85 FNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVAD-GLGFPNGIAFSPDGKTLYVADSFNGRIWRFD 162 (246)
T ss_dssp TEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEE-EESSEEEEEEETTSSEEEEEETTTTEEEEEE
T ss_pred cCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEec-CcccccceEECCcchheeecccccceeEEEe
Confidence 345555555 78877765533 456667765 44333333 344568999999998765 667788899999
Q ss_pred eCCce--E--EEEE-EeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 83 VGSWQ--L--EKLF-KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 83 ~~~~~--~--~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+.... . ...+ ........+-.+++..+|++.++....+.|.++|.+ |+.+..+.+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~ 222 (246)
T PF08450_consen 163 LDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIEL 222 (246)
T ss_dssp EETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-
T ss_pred ccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcC
Confidence 85321 1 1222 122222237889999999988888888999999998 888776654
No 316
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.01 E-value=0.00045 Score=47.21 Aligned_cols=109 Identities=6% Similarity=-0.035 Sum_probs=73.7
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCccee
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 102 (139)
.+..++.++.++.+..+|+.+++.+...... ....+. ..+..+..++.+|.+..+|..+++.++......... ..
T Consensus 255 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~--~~~~~~--~~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~-~~ 329 (394)
T PRK11138 255 VGGVVYALAYNGNLVALDLRSGQIVWKREYG--SVNDFA--VDGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRL-LT 329 (394)
T ss_pred ECCEEEEEEcCCeEEEEECCCCCEEEeecCC--CccCcE--EECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCc-cc
Confidence 3556667778899999999999877654321 111122 245677778889999999999998877552211111 22
Q ss_pred EEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 103 HISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 103 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+... .+..++.++.+|.++++|..+|+.+...++
T Consensus 330 sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~~~~~ 363 (394)
T PRK11138 330 APVL--YNGYLVVGDSEGYLHWINREDGRFVAQQKV 363 (394)
T ss_pred CCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEEEc
Confidence 2222 255678889999999999999998877653
No 317
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=98.01 E-value=0.00041 Score=50.98 Aligned_cols=120 Identities=16% Similarity=0.182 Sum_probs=79.7
Q ss_pred eeEEEEEeecceeeEEEEecC-------CcEEEEeCCCCeEEEEEccCCc-eeeEEE----ecCCCeEEEEECCCCCEEE
Q psy11518 3 TLTQTFVTHSHTASVRSVAAT-------SKLAASSGADETVVLYDMVKRK-QSGALM----QHEGTITCLKFTPEGSHLI 70 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~-------~~~l~~~~~~~~v~i~~~~~~~-~~~~~~----~~~~~v~~~~~~~~~~~l~ 70 (139)
+++..+..+. ..++..+.++ ...-+.|-.+..+..||++-.. .+..-. ......+|++-+.+| ++|
T Consensus 515 KVV~eW~~~~-~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G-~ia 592 (794)
T PF08553_consen 515 KVVEEWKVHD-DIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG-YIA 592 (794)
T ss_pred cEEEEeecCC-CcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCceEEEecCCc-eEE
Confidence 5666777643 3447777762 3455677778889999987542 221111 133456777766555 689
Q ss_pred EecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEc
Q psy11518 71 SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 71 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 127 (139)
.|+.+|.|++||-- +..-... .+.-+.||.+++.+.||+|+++.+. ..|.+++.
T Consensus 593 vgs~~G~IRLyd~~-g~~AKT~-lp~lG~pI~~iDvt~DGkwilaTc~-tyLlLi~t 646 (794)
T PF08553_consen 593 VGSNKGDIRLYDRL-GKRAKTA-LPGLGDPIIGIDVTADGKWILATCK-TYLLLIDT 646 (794)
T ss_pred EEeCCCcEEeeccc-chhhhhc-CCCCCCCeeEEEecCCCcEEEEeec-ceEEEEEE
Confidence 99999999999943 3322222 3455677999999999999987765 45666665
No 318
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.01 E-value=0.00039 Score=47.51 Aligned_cols=111 Identities=15% Similarity=0.094 Sum_probs=75.3
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCC--CeE-----EEEECC--CCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEG--TIT-----CLKFTP--EGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~--~v~-----~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.+..+++++.++.+.-+|.++++.+........ ... .+.-.| .+..++.++.++.+..+|..+++..+...
T Consensus 68 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~ 147 (394)
T PRK11138 68 AYNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQTK 147 (394)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCccccc
Confidence 567888888899999999999998877543220 000 001111 34566777889999999999999988774
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
..... ...... .+..++.+..++.+..+|.++|+.+...+
T Consensus 148 ~~~~~--~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~ 187 (394)
T PRK11138 148 VAGEA--LSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVN 187 (394)
T ss_pred CCCce--ecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeec
Confidence 33211 111112 24456677889999999999999987764
No 319
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.99 E-value=0.00054 Score=38.08 Aligned_cols=90 Identities=9% Similarity=0.108 Sum_probs=61.4
Q ss_pred cEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEE
Q psy11518 25 KLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHI 104 (139)
Q Consensus 25 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~ 104 (139)
+.|++|+.|..|++|+ ....+.++... +.|+++.-... ..++.+..+|+|-+|+-. ..++..+..+. +.++
T Consensus 16 ~eLlvGs~D~~IRvf~--~~e~~~Ei~e~-~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~--~RlWRiKSK~~---~~~~ 86 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFK--GDEIVAEITET-DKVTSLCSLGG-GRFAYALANGTVGVYDRS--QRLWRIKSKNQ---VTSM 86 (111)
T ss_pred ceEEEecCCcEEEEEe--CCcEEEEEecc-cceEEEEEcCC-CEEEEEecCCEEEEEeCc--ceeeeeccCCC---eEEE
Confidence 5799999999999997 44667777654 46777776654 678999999999999853 33444432333 4444
Q ss_pred EE-cc--CCc-EEEEEcCCCeEE
Q psy11518 105 SI-HP--SGK-LALSVGKDKTLR 123 (139)
Q Consensus 105 ~~-~~--~~~-~l~~~~~d~~i~ 123 (139)
++ .. +|. -|++|-.+|.|-
T Consensus 87 ~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 87 AFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred EEEcCCCCCceEEEEEecCCeEE
Confidence 43 33 332 677887888764
No 320
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.99 E-value=0.0015 Score=42.92 Aligned_cols=118 Identities=14% Similarity=0.198 Sum_probs=80.1
Q ss_pred EEec-CCcEEEEeCCCC-eEEEEEccCCceeeEEEecCCCe--EEEEECCCCCEEEEe-----cCCCcEEEEEeC-CceE
Q psy11518 19 SVAA-TSKLAASSGADE-TVVLYDMVKRKQSGALMQHEGTI--TCLKFTPEGSHLISC-----SDDGSIAIFRVG-SWQL 88 (139)
Q Consensus 19 ~~~~-~~~~l~~~~~~~-~v~i~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~-----~~d~~i~~~d~~-~~~~ 88 (139)
+..+ ....++.+-.-| ...+||..+++....+....+.- -.-.|+++|++|.+. ...|.|-+||.. ..+.
T Consensus 11 a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~r 90 (305)
T PF07433_consen 11 AAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRR 90 (305)
T ss_pred eeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEE
Confidence 4445 556666666554 57789999998887765433321 245799999999876 346789999998 5556
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEc------------------CCCeEEEEEcCCCceeEEEec
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVG------------------KDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------------------~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+..+. .+--. ...+.+.||++.|+++. .+..+...|.++|+.+.+..+
T Consensus 91 i~E~~-s~GIG-PHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~L 156 (305)
T PF07433_consen 91 IGEFP-SHGIG-PHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVEL 156 (305)
T ss_pred EeEec-CCCcC-hhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeec
Confidence 66662 22222 67788999998777763 245566777788887766543
No 321
>KOG2114|consensus
Probab=97.98 E-value=0.00021 Score=52.08 Aligned_cols=109 Identities=13% Similarity=0.188 Sum_probs=77.3
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCC-eEEEEECCCCCEEEEecCCCc-----EEEEEeCCc---
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGT-ITCLKFTPEGSHLISCSDDGS-----IAIFRVGSW--- 86 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~-----i~~~d~~~~--- 86 (139)
.+.|++..+..++.|+.+|.|.+.+ ..-+.+..++.+... |..+-...+..+|++.+.|+. +++|++..-
T Consensus 27 ~isc~~s~~~~vvigt~~G~V~~Ln-~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n 105 (933)
T KOG2114|consen 27 AISCCSSSTGSVVIGTADGRVVILN-SSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN 105 (933)
T ss_pred ceeEEcCCCceEEEeeccccEEEec-ccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCC
Confidence 7888888999999999999998877 334445677777666 444433334467777666554 899998542
Q ss_pred ---eEE---EEE--EeCCCCcceeEEEEccCCcEEEEEcCCCeEEEE
Q psy11518 87 ---QLE---KLF--KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125 (139)
Q Consensus 87 ---~~~---~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 125 (139)
.+. ..+ ..+....|++.++.+.+-+.+++|-.+|.|..+
T Consensus 106 ~sP~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~ 152 (933)
T KOG2114|consen 106 NSPQCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICY 152 (933)
T ss_pred CCcceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEE
Confidence 222 222 123345568899999999999999999999887
No 322
>KOG2041|consensus
Probab=97.97 E-value=2.2e-05 Score=56.23 Aligned_cols=117 Identities=15% Similarity=0.209 Sum_probs=89.1
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEE--EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGAL--MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
..||...|+-+.| +.+.+-+...+|.|.+|-+-.+.=.... ....+.|.+++|+.+|..++..-.||.|.+=.++.
T Consensus 67 LeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdG 146 (1189)
T KOG2041|consen 67 LEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDG 146 (1189)
T ss_pred hccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeecc
Confidence 4578999999998 6677899999999999998666322211 23456788999999999999999999999887765
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
.+.-. ..-.+....++.|++|.+.++.+-..|.+++||...
T Consensus 147 NRIwg---KeLkg~~l~hv~ws~D~~~~Lf~~ange~hlydnqg 187 (1189)
T KOG2041|consen 147 NRIWG---KELKGQLLAHVLWSEDLEQALFKKANGETHLYDNQG 187 (1189)
T ss_pred ceecc---hhcchheccceeecccHHHHHhhhcCCcEEEecccc
Confidence 44321 122233367899999999988888889999998753
No 323
>KOG0309|consensus
Probab=97.94 E-value=8.8e-05 Score=53.41 Aligned_cols=108 Identities=17% Similarity=0.248 Sum_probs=77.7
Q ss_pred CCcEEEEeCCCCeEEEEEccCC---ceeeEEEecCCCeEEEEECCC-CCEEEEecCCCcEEEEEeCCceE-EEEEEeCCC
Q psy11518 23 TSKLAASSGADETVVLYDMVKR---KQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQL-EKLFKKAHK 97 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~-~~~~~~~~~ 97 (139)
...+-++......-.+|++... ..-..+.+|...++.+.|+|. ...+++++.|-.+..||++.... ...+..-+.
T Consensus 80 a~~~wiVsts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s 159 (1081)
T KOG0309|consen 80 AKPYWIVSTSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRS 159 (1081)
T ss_pred CCceeEEecCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccc
Confidence 3445555555666667887543 334567789999999999985 56789999999999999987653 333322222
Q ss_pred CcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 98 GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 98 ~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
. ...+.|+-....+++.+..+.|++||++.|..
T Consensus 160 ~--asqVkwnyk~p~vlasshg~~i~vwd~r~gs~ 192 (1081)
T KOG0309|consen 160 A--ASQVKWNYKDPNVLASSHGNDIFVWDLRKGST 192 (1081)
T ss_pred c--CceeeecccCcchhhhccCCceEEEeccCCCc
Confidence 2 57789998666677777778899999998754
No 324
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=97.93 E-value=0.0024 Score=45.98 Aligned_cols=103 Identities=15% Similarity=0.268 Sum_probs=69.6
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEE-ecCCCeEEEEEC--CCCCEEEEecCCCcEEEEEeC---------CceEEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFT--PEGSHLISCSDDGSIAIFRVG---------SWQLEK 90 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~~~~~d~~i~~~d~~---------~~~~~~ 90 (139)
-++..++-.....+.|||...+.....-. ...+.|..+.|. |+++.+++.+....|.++--. ....+.
T Consensus 40 ~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~ 119 (631)
T PF12234_consen 40 IKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIR 119 (631)
T ss_pred cCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeE
Confidence 45555555566789999998876433322 346788999886 588888888888889888531 223333
Q ss_pred EEE-eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEc
Q psy11518 91 LFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 91 ~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 127 (139)
.+. ..+...+|.+..|.++|.+++.+| +.+.|+|-
T Consensus 120 ~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 120 KIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred EEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 332 344556699999999998777664 45777753
No 325
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=97.88 E-value=0.0021 Score=42.58 Aligned_cols=117 Identities=12% Similarity=0.222 Sum_probs=74.1
Q ss_pred EEEecCCcEEEEeCCC---CeEEEEEccC--Ccee--eEEEecCCCeEEEEECCCCCEEEEecC-CCcEEEEEeCC-ceE
Q psy11518 18 RSVAATSKLAASSGAD---ETVVLYDMVK--RKQS--GALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGS-WQL 88 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~---~~v~i~~~~~--~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~-~~~ 88 (139)
+.+.++++.|.++..+ |.|-.|.++. |+.. -.......+-+.+++++++++++++.. .|.|.++-+++ |.+
T Consensus 45 l~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yvsvd~~g~~vf~AnY~~g~v~v~p~~~dG~l 124 (346)
T COG2706 45 LAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYVSVDEDGRFVFVANYHSGSVSVYPLQADGSL 124 (346)
T ss_pred EEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEEEECCCCCEEEEEEccCceEEEEEcccCCcc
Confidence 3444577777777644 6677777664 4322 112222334478999999999987765 57899998865 333
Q ss_pred EEEEEe-CCCCc--------c-eeEEEEccCCcEEEEEcC-CCeEEEEEcCCCceeE
Q psy11518 89 EKLFKK-AHKGT--------A-VNHISIHPSGKLALSVGK-DKTLRTWNLVKGRSAY 134 (139)
Q Consensus 89 ~~~~~~-~~~~~--------~-v~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~ 134 (139)
...... .|.+. + +....+.|+++++++..- --+|.+|++..++...
T Consensus 125 ~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~ 181 (346)
T COG2706 125 QPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTP 181 (346)
T ss_pred ccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcccc
Confidence 222111 11111 1 667889999999988862 3469999999876654
No 326
>KOG1645|consensus
Probab=97.86 E-value=4.5e-05 Score=51.02 Aligned_cols=74 Identities=8% Similarity=0.128 Sum_probs=60.3
Q ss_pred ceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCC-CCEEEEecCCCcEEEEEeCCce
Q psy11518 13 HTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 13 ~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
+...|.++++ +..++..++.+..|+|.|+++......+..+ ..+.+++|.-+ .+++..|...|.|.+||.+..+
T Consensus 192 ~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 192 EGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred cchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence 3444555555 4557889999999999999999888888877 67899999874 5678899999999999998765
No 327
>KOG2444|consensus
Probab=97.86 E-value=0.00014 Score=45.25 Aligned_cols=107 Identities=15% Similarity=0.135 Sum_probs=68.9
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceee-EEEecCCCeEEEE-ECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcc
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLK-FTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA 100 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~v~~~~-~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 100 (139)
-+..+++|+.+|.|.+|.....-... .+..-...+.++. -..++.+..++..++.|+.|++...+..... ..|...+
T Consensus 69 ~~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~-g~h~~~~ 147 (238)
T KOG2444|consen 69 ASAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYV-GQHNFES 147 (238)
T ss_pred cCceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeee-ccccCCC
Confidence 45678899999999999876221111 1111122333322 2234567889999999999999887776665 3344233
Q ss_pred eeEEEEccCCcEEEEE--cCCCeEEEEEcCCC
Q psy11518 101 VNHISIHPSGKLALSV--GKDKTLRTWNLVKG 130 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~--~~d~~i~i~d~~~~ 130 (139)
.........++++..+ +.|..+..|++..-
T Consensus 148 ~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 148 GEELIVVGSDEFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred cceeEEecCCceEEeeccccchhhhhcchhhh
Confidence 5556666667777777 77888888887643
No 328
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=97.86 E-value=0.0021 Score=42.17 Aligned_cols=99 Identities=15% Similarity=0.260 Sum_probs=73.5
Q ss_pred EEecCCcEEEEeC-----CCCeEEEEEcc-CCceeeEEEecCCCeEEEEECCCCCEEEEecC------------------
Q psy11518 19 SVAATSKLAASSG-----ADETVVLYDMV-KRKQSGALMQHEGTITCLKFTPEGSHLISCSD------------------ 74 (139)
Q Consensus 19 ~~~~~~~~l~~~~-----~~~~v~i~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------ 74 (139)
++++||++|++.- ..|.|-|||.. +.+.+.++..|.-.-..+.+.|+++.|+.+..
T Consensus 57 ~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM 136 (305)
T PF07433_consen 57 VFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTM 136 (305)
T ss_pred EEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhc
Confidence 4556888888763 45799999998 66888888888766788899999987776632
Q ss_pred CCcEEEEEeCCceEEEEEEe--CCCCcceeEEEEccCCcEEEEEc
Q psy11518 75 DGSIAIFRVGSWQLEKLFKK--AHKGTAVNHISIHPSGKLALSVG 117 (139)
Q Consensus 75 d~~i~~~d~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~ 117 (139)
+..+...|..+++++..... ..+..++.+++++++|..++..-
T Consensus 137 ~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q 181 (305)
T PF07433_consen 137 QPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQ 181 (305)
T ss_pred CCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEe
Confidence 22466677888888777544 44444599999999988666553
No 329
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.84 E-value=0.00019 Score=49.41 Aligned_cols=95 Identities=15% Similarity=0.255 Sum_probs=68.7
Q ss_pred EEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEc
Q psy11518 38 LYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG 117 (139)
Q Consensus 38 i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 117 (139)
+|...+...-..+....-++...+|||.|.+|++....+ |.+|+-.....+..+ .|. . |..+.|+|++++|++-.
T Consensus 16 f~~~~s~~~~~~~~~~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~~l~~~--~~~-~-V~~~~fSP~~kYL~tw~ 90 (561)
T COG5354 16 FWNSQSEVIHTRFESENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKAKLVRF--RHP-D-VKYLDFSPNEKYLVTWS 90 (561)
T ss_pred eecCccccccccccccCcchhheeecCcchheehhhccc-eEEccccchhheeee--ecC-C-ceecccCcccceeeeec
Confidence 344444433334444556788899999999999887665 999997776644444 222 2 88899999999999865
Q ss_pred CC---------------CeEEEEEcCCCceeEEEe
Q psy11518 118 KD---------------KTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 118 ~d---------------~~i~i~d~~~~~~~~~~~ 137 (139)
.. ..+.+||..++..+..+.
T Consensus 91 ~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~ 125 (561)
T COG5354 91 REPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFN 125 (561)
T ss_pred cCCccChhhccCCccccCceeEEeccCceeEeecc
Confidence 33 359999999999887754
No 330
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.84 E-value=0.00097 Score=45.76 Aligned_cols=88 Identities=14% Similarity=0.253 Sum_probs=60.7
Q ss_pred EEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccC-----------------Cc-
Q psy11518 50 LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS-----------------GK- 111 (139)
Q Consensus 50 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~-----------------~~- 111 (139)
+....-.+.++..+|.+++.|+.+.=|.|.++|+.++..+..+ .+.++..+.-+..... ..
T Consensus 303 l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmW-KGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~ 381 (415)
T PF14655_consen 303 LPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMW-KGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALF 381 (415)
T ss_pred eccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhh-ccCccceEEEEEeecccccccccccccCCCCcceEE
Confidence 3344456789999999999999888899999999888776665 3333222211111111 11
Q ss_pred EEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 112 LALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 112 ~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+++-+...|.|.||++++|..+..+.+
T Consensus 382 LvIyaprRg~lEvW~~~~g~Rv~a~~v 408 (415)
T PF14655_consen 382 LVIYAPRRGILEVWSMRQGPRVAAFNV 408 (415)
T ss_pred EEEEeccCCeEEEEecCCCCEEEEEEe
Confidence 234566789999999999999988765
No 331
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=97.82 E-value=0.0015 Score=45.31 Aligned_cols=111 Identities=16% Similarity=0.214 Sum_probs=76.3
Q ss_pred eeeEEEEec--CCcEE--EEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCC---CcEEEEEeCCc
Q psy11518 14 TASVRSVAA--TSKLA--ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---GSIAIFRVGSW 86 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l--~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~~~d~~~~ 86 (139)
.++|.++.| .++.+ +.|-....+.++|+... ....+. ...=..+.|+|.+++++.++.+ |.+.+||....
T Consensus 274 ~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~P--e~~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~r 350 (561)
T COG5354 274 KDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYFP--EQKRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGR 350 (561)
T ss_pred cccceeeeecccCCceeEEecccccceeecccccc-eEEecC--CcccccccccCcccEEEEecCCccccceEEeccCCc
Confidence 566777776 44444 34457888999998665 333333 3344678899999999887664 67999998765
Q ss_pred eEEE-EEEeCCCCcceeEEEEccCCcEEEEEc------CCCeEEEEEcCCCc
Q psy11518 87 QLEK-LFKKAHKGTAVNHISIHPSGKLALSVG------KDKTLRTWNLVKGR 131 (139)
Q Consensus 87 ~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~i~i~d~~~~~ 131 (139)
.... .+ .... .+-..|+|+++++.+.. .|..+.|||+...+
T Consensus 351 f~~~~~~-~~~n---~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v~g~~ 398 (561)
T COG5354 351 FKVAGAF-NGLN---TSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDVYGAK 398 (561)
T ss_pred eEEEEEe-ecCC---ceEeeccCCceEEEecCCCcccccCcceEEEEecCch
Confidence 5443 33 2222 45578999999988775 47889999986543
No 332
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=97.81 E-value=0.0027 Score=40.50 Aligned_cols=101 Identities=14% Similarity=0.106 Sum_probs=63.4
Q ss_pred CcEEEEeCCCCeEEEEEccCCceeeEEEe-----cCCCeEEEEECCCCCEEEEecCC--------CcEEEEEeCCceEEE
Q psy11518 24 SKLAASSGADETVVLYDMVKRKQSGALMQ-----HEGTITCLKFTPEGSHLISCSDD--------GSIAIFRVGSWQLEK 90 (139)
Q Consensus 24 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d--------~~i~~~d~~~~~~~~ 90 (139)
+..++.+...+ +.++|+.+++....... .....+.+++.|+|++.++.... |.+..++.. ++...
T Consensus 51 ~g~l~v~~~~~-~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~ 128 (246)
T PF08450_consen 51 DGRLYVADSGG-IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTV 128 (246)
T ss_dssp TSEEEEEETTC-EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEE
T ss_pred CCEEEEEEcCc-eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEE
Confidence 34444444444 45569888855443332 23457889999999988776544 346666655 45444
Q ss_pred EEEeCCCCcceeEEEEccCCcEEE-EEcCCCeEEEEEcCC
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLAL-SVGKDKTLRTWNLVK 129 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~d~~~ 129 (139)
.... -.. ...++|+|+++.|+ +-+..+.|..|++..
T Consensus 129 ~~~~--~~~-pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~ 165 (246)
T PF08450_consen 129 VADG--LGF-PNGIAFSPDGKTLYVADSFNGRIWRFDLDA 165 (246)
T ss_dssp EEEE--ESS-EEEEEEETTSSEEEEEETTTTEEEEEEEET
T ss_pred EecC--ccc-ccceEECCcchheeecccccceeEEEeccc
Confidence 4322 222 78999999998665 667788899999864
No 333
>KOG1920|consensus
Probab=97.80 E-value=0.0007 Score=51.20 Aligned_cols=113 Identities=14% Similarity=0.155 Sum_probs=72.1
Q ss_pred EEecCCcEEEE-----eCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec---CCCcEEEEEeCCceEEE
Q psy11518 19 SVAATSKLAAS-----SGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS---DDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 19 ~~~~~~~~l~~-----~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~~~~~~~ 90 (139)
++..||+++++ ......+++||-+ +..-..-......-.+++|-|.|..+++-. .|+.|.+|.- +|-...
T Consensus 202 sWRgDg~~fAVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffEr-NGL~hg 279 (1265)
T KOG1920|consen 202 SWRGDGEYFAVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFER-NGLRHG 279 (1265)
T ss_pred EEccCCcEEEEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEec-CCcccc
Confidence 34449999988 3334799999976 433222222233346899999999887653 3456888774 333322
Q ss_pred EEE--eCCCCcceeEEEEccCCcEEEE---EcCCCeEEEEEcCCCcee
Q psy11518 91 LFK--KAHKGTAVNHISIHPSGKLALS---VGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 91 ~~~--~~~~~~~v~~~~~~~~~~~l~~---~~~d~~i~i~d~~~~~~~ 133 (139)
.+. .+....++..++|+.++..|++ ......|.+|-+.+...-
T Consensus 280 ~f~l~~p~de~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWY 327 (1265)
T KOG1920|consen 280 EFVLPFPLDEKEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHWY 327 (1265)
T ss_pred ccccCCcccccchheeeecCCCCceeeeecccccceEEEEEecCeEEE
Confidence 221 1222223889999999999887 455666999988776543
No 334
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.78 E-value=0.00013 Score=34.22 Aligned_cols=34 Identities=21% Similarity=0.688 Sum_probs=29.5
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
...|.+++|+|...++|.+..+|.|.++.+ +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 356899999999999999999999999998 4443
No 335
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=97.76 E-value=0.00029 Score=46.02 Aligned_cols=124 Identities=16% Similarity=0.229 Sum_probs=80.2
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCce---eeEEEec-----CCCeEEEEECCC-CCEEEEecCCCcEE
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ---SGALMQH-----EGTITCLKFTPE-GSHLISCSDDGSIA 79 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~---~~~~~~~-----~~~v~~~~~~~~-~~~l~~~~~d~~i~ 79 (139)
..|+..+.++++ +.+.+++ ..|-.|.+|+++-... +...+.| ..-|++..|+|. .+.+.-.+..|.|+
T Consensus 169 NaH~yhiNSiS~NsD~et~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ik 247 (460)
T COG5170 169 NAHPYHINSISFNSDKETLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIK 247 (460)
T ss_pred ccceeEeeeeeecCchheeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEE
Confidence 567888899998 4445554 4577899999865322 2222222 235778889995 45566677789999
Q ss_pred EEEeCCceEE------EEEE--------eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc-eeEEE
Q psy11518 80 IFRVGSWQLE------KLFK--------KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR-SAYIT 136 (139)
Q Consensus 80 ~~d~~~~~~~------~~~~--------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~ 136 (139)
+-|++...+. .... ...-...|..+.|+++|+++++-+. -++.|||.+..+ ++.++
T Consensus 248 l~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi 318 (460)
T COG5170 248 LNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTI 318 (460)
T ss_pred ehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceee
Confidence 9999853221 0000 0011123889999999999987665 479999998653 34443
No 336
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.70 E-value=0.0029 Score=44.61 Aligned_cols=106 Identities=11% Similarity=0.137 Sum_probs=72.5
Q ss_pred EEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEe------------------cCCCcEEEEEeCCce
Q psy11518 26 LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC------------------SDDGSIAIFRVGSWQ 87 (139)
Q Consensus 26 ~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~------------------~~d~~i~~~d~~~~~ 87 (139)
.+++++.+|.+...|.++++.+....... ..++.+| ..+..+ ..+|.+.-.|..+++
T Consensus 303 ~V~~g~~~G~l~ald~~tG~~~W~~~~~~---~~~~~~~--~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG~ 377 (488)
T cd00216 303 AIVHAPKNGFFYVLDRTTGKLISARPEVE---QPMAYDP--GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTGK 377 (488)
T ss_pred EEEEECCCceEEEEECCCCcEeeEeEeec---cccccCC--ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCCc
Confidence 57888899999999999999887654221 1223344 222221 246789999999999
Q ss_pred EEEEEEeCCCC------cce--eEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 88 LEKLFKKAHKG------TAV--NHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 88 ~~~~~~~~~~~------~~v--~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.++........ .+. ..+. ..+..++.++.||.++.+|.++|+.+.+.++
T Consensus 378 ~~W~~~~~~~~~~~~~g~~~~~~~~~--~~g~~v~~g~~dG~l~ald~~tG~~lW~~~~ 434 (488)
T cd00216 378 VVWEKREGTIRDSWNIGFPHWGGSLA--TAGNLVFAGAADGYFRAFDATTGKELWKFRT 434 (488)
T ss_pred EeeEeeCCccccccccCCcccCcceE--ecCCeEEEECCCCeEEEEECCCCceeeEEEC
Confidence 88887443110 101 1122 2467888889999999999999999988765
No 337
>PRK02888 nitrous-oxide reductase; Validated
Probab=97.69 E-value=0.0041 Score=44.73 Aligned_cols=106 Identities=11% Similarity=0.099 Sum_probs=67.0
Q ss_pred CCcEEE-EeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec----------------------------
Q psy11518 23 TSKLAA-SSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS---------------------------- 73 (139)
Q Consensus 23 ~~~~l~-~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---------------------------- 73 (139)
+|+.+. +.-..+.+.+.|.++.+...++.--. ....++++|+++++.+.+
T Consensus 203 DGk~l~~~~ey~~~vSvID~etmeV~~qV~Vdg-npd~v~~spdGk~afvTsyNsE~G~tl~em~a~e~d~~vvfni~~i 281 (635)
T PRK02888 203 DGKDLDDPKKYRSLFTAVDAETMEVAWQVMVDG-NLDNVDTDYDGKYAFSTCYNSEEGVTLAEMMAAERDWVVVFNIARI 281 (635)
T ss_pred CCCEeecccceeEEEEEEECccceEEEEEEeCC-CcccceECCCCCEEEEeccCcccCcceeeeccccCceEEEEchHHH
Confidence 555443 23345667777777766665554322 334556777777765554
Q ss_pred ------------CCCcEEEEEeCC-----ceEEEEEEeCCCCcceeEEEEccCCcEEEEEc-CCCeEEEEEcCCCce
Q psy11518 74 ------------DDGSIAIFRVGS-----WQLEKLFKKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRS 132 (139)
Q Consensus 74 ------------~d~~i~~~d~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~ 132 (139)
.++.|.+.|..+ ......+..+. .+..++++|||+++++++ .+..+.|+|+.+.+.
T Consensus 282 ea~vkdGK~~~V~gn~V~VID~~t~~~~~~~v~~yIPVGK---sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~ 355 (635)
T PRK02888 282 EEAVKAGKFKTIGGSKVPVVDGRKAANAGSALTRYVPVPK---NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD 355 (635)
T ss_pred HHhhhCCCEEEECCCEEEEEECCccccCCcceEEEEECCC---CccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence 124477777766 34444442222 278899999999887776 589999999988653
No 338
>KOG0882|consensus
Probab=97.66 E-value=0.00089 Score=45.78 Aligned_cols=124 Identities=16% Similarity=0.176 Sum_probs=89.6
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccC------Ccee---------eEEEecCCCeEEEEECCCCCEEEEecC
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVK------RKQS---------GALMQHEGTITCLKFTPEGSHLISCSD 74 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~------~~~~---------~~~~~~~~~v~~~~~~~~~~~l~~~~~ 74 (139)
-|..+|.++.+ .+..+++....|.|.-|..+. .+.. ..+........++.|+|++..+++-+.
T Consensus 142 lH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~ 221 (558)
T KOG0882|consen 142 LHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNP 221 (558)
T ss_pred cccCceEEEEeeccccceeeccccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCc
Confidence 36677777776 677888888899999999763 1111 112234556789999999999999999
Q ss_pred CCcEEEEEeCCceEEEEEEe-------------------------------CCCCcceeEEEEccCCcEEEEEcCCCeEE
Q psy11518 75 DGSIAIFRVGSWQLEKLFKK-------------------------------AHKGTAVNHISIHPSGKLALSVGKDKTLR 123 (139)
Q Consensus 75 d~~i~~~d~~~~~~~~~~~~-------------------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 123 (139)
|..|++++..++++...+.. .+...+-..+.|...+++|+.++.=| |.
T Consensus 222 DrkVR~F~~KtGklvqeiDE~~t~~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ik 300 (558)
T KOG0882|consen 222 DRKVRGFVFKTGKLVQEIDEVLTDAQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IK 300 (558)
T ss_pred ccEEEEEEeccchhhhhhhccchhhhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EE
Confidence 99999999988765433210 01112245678999999999988765 88
Q ss_pred EEEcCCCceeEEE
Q psy11518 124 TWNLVKGRSAYIT 136 (139)
Q Consensus 124 i~d~~~~~~~~~~ 136 (139)
+.++.+++....+
T Consensus 301 vin~~tn~v~ri~ 313 (558)
T KOG0882|consen 301 VINLDTNTVVRIL 313 (558)
T ss_pred EEEeecCeEEEEe
Confidence 9999988776654
No 339
>KOG1008|consensus
Probab=97.58 E-value=1.4e-05 Score=56.30 Aligned_cols=113 Identities=19% Similarity=0.249 Sum_probs=79.5
Q ss_pred eEEEEec----CCcEEEEeCCCCeEEEEEccCCce--eeEEEecCCCeEEEEECC-CCCEEEEecC----CCcEEEEEeC
Q psy11518 16 SVRSVAA----TSKLAASSGADETVVLYDMVKRKQ--SGALMQHEGTITCLKFTP-EGSHLISCSD----DGSIAIFRVG 84 (139)
Q Consensus 16 ~v~~~~~----~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~----d~~i~~~d~~ 84 (139)
.+.|++. +..++++|..+|.|.+-.+....- .....++....++++|++ |.+.||.|-. |..+.+||+.
T Consensus 58 y~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~ 137 (783)
T KOG1008|consen 58 YVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDIN 137 (783)
T ss_pred CceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecc
Confidence 4445553 556889999999999887754321 233456777889999998 6677777743 5569999997
Q ss_pred Cc--eEE--EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 85 SW--QLE--KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 85 ~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
+. .+. ..+.. .......+++|..+.+++++|...+.++++|+|.
T Consensus 138 s~ltvPke~~~fs~-~~l~gqns~cwlrd~klvlaGm~sr~~~ifdlRq 185 (783)
T KOG1008|consen 138 SLLTVPKESPLFSS-STLDGQNSVCWLRDTKLVLAGMTSRSVHIFDLRQ 185 (783)
T ss_pred cccCCCcccccccc-ccccCccccccccCcchhhcccccchhhhhhhhh
Confidence 76 222 22211 1222266899998999999999999999999984
No 340
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=97.55 E-value=0.005 Score=43.47 Aligned_cols=113 Identities=10% Similarity=0.054 Sum_probs=73.0
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCC------eE--EEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEe
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT------IT--CLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~------v~--~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 94 (139)
.+..++.++.++.|.-.|..+++.+..+...... +. .+... ++..++.++.++.|..+|.++++.++.+..
T Consensus 60 ~~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~ 138 (488)
T cd00216 60 VDGDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGN 138 (488)
T ss_pred ECCEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecC
Confidence 4556777888899999999999888776533220 00 01111 225677788899999999999999988854
Q ss_pred CCCC--c-ce-eEEEEccCCcEEEEEc---------CCCeEEEEEcCCCceeEEEec
Q psy11518 95 AHKG--T-AV-NHISIHPSGKLALSVG---------KDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 95 ~~~~--~-~v-~~~~~~~~~~~l~~~~---------~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.... . .+ ....+. + ..++.++ .++.+..+|..+|+.+....+
T Consensus 139 ~~~~~~~~~i~ssP~v~-~-~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~ 193 (488)
T cd00216 139 NDQVPPGYTMTGAPTIV-K-KLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYT 193 (488)
T ss_pred CCCcCcceEecCCCEEE-C-CEEEEeccccccccCCCCcEEEEEECCCCceeeEeec
Confidence 3321 0 01 111122 2 3444443 368899999999999887653
No 341
>KOG4649|consensus
Probab=97.51 E-value=0.0092 Score=38.46 Aligned_cols=83 Identities=11% Similarity=0.005 Sum_probs=61.0
Q ss_pred CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeE
Q psy11518 24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH 103 (139)
Q Consensus 24 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~ 103 (139)
|++++.|...|.+.+.+++++.....+..-+.-=..-...+++..+..++.|+.....|.++...+...+.+... -.+
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~--f~s 140 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGT--FVS 140 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeehhhhccceEEcCCCceEEEecCCCcEEEecccccceEEecccCCce--ecc
Confidence 556889999999999999999888777654322223356778999999999999999999988877776433332 233
Q ss_pred EEEcc
Q psy11518 104 ISIHP 108 (139)
Q Consensus 104 ~~~~~ 108 (139)
-+..|
T Consensus 141 P~i~~ 145 (354)
T KOG4649|consen 141 PVIAP 145 (354)
T ss_pred ceecC
Confidence 44555
No 342
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.46 E-value=0.016 Score=39.87 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=71.3
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCce-------------------------------------------eeEEEecCC
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRKQ-------------------------------------------SGALMQHEG 55 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~-------------------------------------------~~~~~~~~~ 55 (139)
+++++..-|++|...|.|.+|.....+. ...++...+
T Consensus 8 s~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~~~~~g 87 (395)
T PF08596_consen 8 SFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLLDAKQG 87 (395)
T ss_dssp EEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE---S-
T ss_pred EecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhheeccCC
Confidence 3344667788888889988887642211 111223467
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCC------CCcceeEEEEcc-----CC---cEEEEEcCCCe
Q psy11518 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH------KGTAVNHISIHP-----SG---KLALSVGKDKT 121 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~------~~~~v~~~~~~~-----~~---~~l~~~~~d~~ 121 (139)
+|++++.+ +=-++|.|..+|.+.+.|++....+..-.... ....++++.|.. |+ -.+++|...|.
T Consensus 88 ~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vGTn~G~ 166 (395)
T PF08596_consen 88 PVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVGTNSGN 166 (395)
T ss_dssp SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEEETTSE
T ss_pred cEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEEeCCCC
Confidence 89999987 44488999999999999999888877643332 222377788773 33 47889999999
Q ss_pred EEEEEcC
Q psy11518 122 LRTWNLV 128 (139)
Q Consensus 122 i~i~d~~ 128 (139)
+.+|.+.
T Consensus 167 v~~fkIl 173 (395)
T PF08596_consen 167 VLTFKIL 173 (395)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999874
No 343
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=97.42 E-value=0.015 Score=42.97 Aligned_cols=76 Identities=14% Similarity=0.295 Sum_probs=51.7
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEEeCC----------ceE---EEEE------EeCCCCcceeEEEEccC---CcEE
Q psy11518 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGS----------WQL---EKLF------KKAHKGTAVNHISIHPS---GKLA 113 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~----------~~~---~~~~------~~~~~~~~v~~~~~~~~---~~~l 113 (139)
.|..+..+|+|++++..+..| |.+..+.. ++. ...+ ........|..+.|+|. +..|
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~-v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l 164 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRG-VVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHL 164 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCc-EEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeE
Confidence 578899999999999888766 44444321 111 1111 11223335889999995 5789
Q ss_pred EEEcCCCeEEEEEcCCCce
Q psy11518 114 LSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 114 ~~~~~d~~i~i~d~~~~~~ 132 (139)
++-..|+.+++||+...+.
T Consensus 165 ~vLtsdn~lR~y~~~~~~~ 183 (717)
T PF10168_consen 165 VVLTSDNTLRLYDISDPQH 183 (717)
T ss_pred EEEecCCEEEEEecCCCCC
Confidence 9999999999999976543
No 344
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.41 E-value=0.024 Score=40.57 Aligned_cols=60 Identities=10% Similarity=0.115 Sum_probs=41.7
Q ss_pred CcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 76 ~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
|.|.-+|+.+++..+........ ..+. ..-.+..++.++.+|.++.+|.++|+.+....+
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p~--~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFPL--WGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCCC--CCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 45777888888888877433221 1111 112455777788899999999999999988764
No 345
>KOG2079|consensus
Probab=97.39 E-value=0.00042 Score=51.84 Aligned_cols=72 Identities=13% Similarity=0.236 Sum_probs=57.5
Q ss_pred CCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 65 EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 65 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.+..++.|+..|.+...|.... ..+.....+...+|++++|+.+|+.++.|-.+|.|.+||+..++.+..+.
T Consensus 98 ~~~~ivi~Ts~ghvl~~d~~~n-L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~ 169 (1206)
T KOG2079|consen 98 VVVPIVIGTSHGHVLLSDMTGN-LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVIT 169 (1206)
T ss_pred eeeeEEEEcCchhhhhhhhhcc-cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeee
Confidence 4556888888999999887654 22233355666679999999999999999999999999999988877654
No 346
>KOG2114|consensus
Probab=97.39 E-value=0.026 Score=41.88 Aligned_cols=120 Identities=12% Similarity=0.134 Sum_probs=77.1
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEEcc--C--CceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEE
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYDMV--K--RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~~~--~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 91 (139)
++..++-+-+.+|+|-.+|.|..+.=+ . +....-......+|+.+.+..++...+-...-..|.+|.+.+..+...
T Consensus 129 s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~ 208 (933)
T KOG2114|consen 129 SSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLK 208 (933)
T ss_pred eEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCccee
Confidence 344444478889999999999888522 1 111112223457899999988777632222334699999985552333
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
. ..+++.++.|-++++....+++++. ..+.+|+....++...+.
T Consensus 209 ~-ld~~G~~lnCss~~~~t~qfIca~~-e~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 209 V-LDNNGISLNCSSFSDGTYQFICAGS-EFLYFYDSDGRGPCFAFE 252 (933)
T ss_pred e-eccCCccceeeecCCCCccEEEecC-ceEEEEcCCCcceeeeec
Confidence 2 5666777899999987665555554 358888887666655543
No 347
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=97.37 E-value=0.012 Score=41.98 Aligned_cols=115 Identities=9% Similarity=0.054 Sum_probs=68.6
Q ss_pred eeEEEEec------CCcEEEEeCCCCeEEEEEccC-----CceeeEEEec-CC----CeEEEEECCCCCEEEEecCCCcE
Q psy11518 15 ASVRSVAA------TSKLAASSGADETVVLYDMVK-----RKQSGALMQH-EG----TITCLKFTPEGSHLISCSDDGSI 78 (139)
Q Consensus 15 ~~v~~~~~------~~~~l~~~~~~~~v~i~~~~~-----~~~~~~~~~~-~~----~v~~~~~~~~~~~l~~~~~d~~i 78 (139)
..|..++| +-..+++.-....|.+|.+.. ++.+.....+ .. --..+.|+|....|+.-.....-
T Consensus 57 EhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvS 136 (671)
T PF15390_consen 57 EHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVS 136 (671)
T ss_pred ceeeeeeecCcccCCCCceEEEeccceEEEEEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCcee
Confidence 44555555 444666777788999999752 2322222111 11 12467899998888766655544
Q ss_pred EEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEE-cCCCeEEEEEcCCC
Q psy11518 79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSV-GKDKTLRTWNLVKG 130 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~ 130 (139)
.+++++.....-.......+. |.|.+|.+||+.|+++ +..=.-+|||-.+.
T Consensus 137 V~~sV~~d~srVkaDi~~~G~-IhCACWT~DG~RLVVAvGSsLHSyiWd~~qK 188 (671)
T PF15390_consen 137 VLPSVHCDSSRVKADIKTSGL-IHCACWTKDGQRLVVAVGSSLHSYIWDSAQK 188 (671)
T ss_pred EeeeeeeCCceEEEeccCCce-EEEEEecCcCCEEEEEeCCeEEEEEecCchh
Confidence 555554433333332233444 9999999999977655 44555778876543
No 348
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=97.35 E-value=0.011 Score=38.22 Aligned_cols=39 Identities=23% Similarity=0.473 Sum_probs=34.6
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEE
Q psy11518 54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 92 (139)
...|..|+.+|+|+.||+...+|.|.+|++.+-......
T Consensus 229 ~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~~~~~W 267 (282)
T PF15492_consen 229 QDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLRLQRSW 267 (282)
T ss_pred CCceEEEEECCCCCEEEEEEcCCeEEEEecCcchhhccc
Confidence 567899999999999999999999999999887766665
No 349
>KOG1832|consensus
Probab=97.34 E-value=0.00033 Score=51.78 Aligned_cols=83 Identities=22% Similarity=0.370 Sum_probs=66.9
Q ss_pred ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcC--CCeE
Q psy11518 45 KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK--DKTL 122 (139)
Q Consensus 45 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i 122 (139)
+....+..|....+|++|+.+.+.|+.|+..|.|+++++.+|...... ..|... ++.+.=+.+|...++.+. ....
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~-ncH~Sa-vT~vePs~dgs~~Ltsss~S~Pls 1169 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESV-NCHQSA-VTLVEPSVDGSTQLTSSSSSSPLS 1169 (1516)
T ss_pred ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccc-cccccc-cccccccCCcceeeeeccccCchH
Confidence 455667788899999999999999999999999999999999888777 455554 888888888887766553 3357
Q ss_pred EEEEcCC
Q psy11518 123 RTWNLVK 129 (139)
Q Consensus 123 ~i~d~~~ 129 (139)
.+|++.+
T Consensus 1170 aLW~~~s 1176 (1516)
T KOG1832|consen 1170 ALWDASS 1176 (1516)
T ss_pred HHhcccc
Confidence 7888854
No 350
>KOG3621|consensus
Probab=97.32 E-value=0.0008 Score=48.18 Aligned_cols=69 Identities=25% Similarity=0.389 Sum_probs=53.5
Q ss_pred EEEEecCCcEEEEeCCCCeEEEEEccCCceee-----EE-EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 17 VRSVAATSKLAASSGADETVVLYDMVKRKQSG-----AL-MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~-----~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
+.+++.+..++|+|+..|.|.++-+....+.. .+ +.|...|+++.|++++..+.+|...|+|.+-.+..
T Consensus 81 ~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 81 VRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred EEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 44455578889999999999999876643221 11 23678899999999999999999999998877655
No 351
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.30 E-value=0.0086 Score=41.53 Aligned_cols=110 Identities=19% Similarity=0.284 Sum_probs=65.2
Q ss_pred EEEecCCcEEE-EeCCCCe--EEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCc--EEEEEeCCceEEEE
Q psy11518 18 RSVAATSKLAA-SSGADET--VVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGS--IAIFRVGSWQLEKL 91 (139)
Q Consensus 18 ~~~~~~~~~l~-~~~~~~~--v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~~~d~~~~~~~~~ 91 (139)
..+++||+.|+ +...|+. |.++|+..+. +..+..-.+.-..-.|+|+|++++ +.+..|. |.+.+.........
T Consensus 243 P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~~ri 321 (425)
T COG0823 243 PAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQVTRL 321 (425)
T ss_pred ccCCCCCCEEEEEECCCCCccEEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCceeEe
Confidence 34556777765 4455665 4555665554 333433333334567999999886 5555665 56666666555333
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcC-CCe--EEEEEcCCCc
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGK-DKT--LRTWNLVKGR 131 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~--i~i~d~~~~~ 131 (139)
. ..... -..-.|+|||++++..+. +|. |.+.|+.++.
T Consensus 322 T-~~~~~--~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~ 361 (425)
T COG0823 322 T-FSGGG--NSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGG 361 (425)
T ss_pred e-ccCCC--CcCccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence 3 22222 226779999998887664 344 6777776655
No 352
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.29 E-value=0.017 Score=38.62 Aligned_cols=118 Identities=12% Similarity=0.128 Sum_probs=79.8
Q ss_pred cceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec----------CCCcEEEE
Q psy11518 12 SHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIF 81 (139)
Q Consensus 12 ~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~ 81 (139)
.|...|.+..+.. . .+.+.++|.++++.+..+..-- ...+..+|+++.++++. ....|.+|
T Consensus 2 ~~rvyV~D~~~~~------~-~~rv~viD~d~~k~lGmi~~g~--~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~ 72 (342)
T PF06433_consen 2 AHRVYVQDPVFFH------M-TSRVYVIDADSGKLLGMIDTGF--LGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIW 72 (342)
T ss_dssp TTEEEEEE-GGGG------S-SEEEEEEETTTTEEEEEEEEES--SEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CcEEEEECCcccc------c-cceEEEEECCCCcEEEEeeccc--CCceeECCCCCEEEEEEEEEeccccccceeEEEEE
Confidence 3556666665421 1 2479999999999888877432 34567899999877542 23469999
Q ss_pred EeCCceEEEEEEeCCC-C----cceeEEEEccCCcEEEEEc--CCCeEEEEEcCCCceeEEEec
Q psy11518 82 RVGSWQLEKLFKKAHK-G----TAVNHISIHPSGKLALSVG--KDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 82 d~~~~~~~~~~~~~~~-~----~~v~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~ 138 (139)
|..+..+...+..+.. . .....++++.|++++++.. -.-.|.|.|+..++.+..+.+
T Consensus 73 D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~ 136 (342)
T PF06433_consen 73 DTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDT 136 (342)
T ss_dssp ETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEG
T ss_pred ecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecC
Confidence 9999988887765543 1 1134568889999887764 456799999999888776653
No 353
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.28 E-value=0.024 Score=40.56 Aligned_cols=114 Identities=8% Similarity=0.059 Sum_probs=71.1
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecC-CCeE---EEEECC-----CCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHE-GTIT---CLKFTP-----EGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~-~~v~---~~~~~~-----~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.+..++.++.++.|.-.|..+++.+..+.... ..+. +..... .+..++.++.++.+.-+|..+++.++...
T Consensus 68 ~~g~vyv~s~~g~v~AlDa~TGk~lW~~~~~~~~~~~~~~~~~~~~rg~av~~~~v~v~t~dg~l~ALDa~TGk~~W~~~ 147 (527)
T TIGR03075 68 VDGVMYVTTSYSRVYALDAKTGKELWKYDPKLPDDVIPVMCCDVVNRGVALYDGKVFFGTLDARLVALDAKTGKVVWSKK 147 (527)
T ss_pred ECCEEEEECCCCcEEEEECCCCceeeEecCCCCcccccccccccccccceEECCEEEEEcCCCEEEEEECCCCCEEeecc
Confidence 35677777778899999999999887765321 1111 110110 23456677889999999999999988874
Q ss_pred eCCCCc--ceeE-EEEccCCcEEEEEc-----CCCeEEEEEcCCCceeEEEe
Q psy11518 94 KAHKGT--AVNH-ISIHPSGKLALSVG-----KDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 94 ~~~~~~--~v~~-~~~~~~~~~l~~~~-----~d~~i~i~d~~~~~~~~~~~ 137 (139)
...... .+.+ .... ++..++..+ .+|.|..+|.++|+.+..+.
T Consensus 148 ~~~~~~~~~~tssP~v~-~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~ 198 (527)
T TIGR03075 148 NGDYKAGYTITAAPLVV-KGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRY 198 (527)
T ss_pred cccccccccccCCcEEE-CCEEEEeecccccCCCcEEEEEECCCCceeEecc
Confidence 322110 0111 1111 444443322 27899999999999987653
No 354
>KOG1008|consensus
Probab=97.24 E-value=3.4e-05 Score=54.47 Aligned_cols=111 Identities=14% Similarity=0.153 Sum_probs=75.6
Q ss_pred ecceeeEEEEec---CCcEEEEeC----CCCeEEEEEccCC--cee--eEEEe-cCCCeEEEEECCCCCEEEEecCCCcE
Q psy11518 11 HSHTASVRSVAA---TSKLAASSG----ADETVVLYDMVKR--KQS--GALMQ-HEGTITCLKFTPEGSHLISCSDDGSI 78 (139)
Q Consensus 11 ~~~~~~v~~~~~---~~~~l~~~~----~~~~v~i~~~~~~--~~~--~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i 78 (139)
.++..+|++++| |.+.||+|- .|..+.|||+.++ .+. ..+.+ ......+++|..+.+.+.+|.....+
T Consensus 99 p~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~ 178 (783)
T KOG1008|consen 99 PGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSV 178 (783)
T ss_pred ccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchh
Confidence 456678888888 667788774 4567999999776 222 12222 33445688888888889999999999
Q ss_pred EEEEeCCceEE-EEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEE
Q psy11518 79 AIFRVGSWQLE-KLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 79 ~~~d~~~~~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d 126 (139)
+++|++..... ..+ .... +..+...| .+.++++-. |+.|.+||
T Consensus 179 ~ifdlRqs~~~~~sv---nTk~-vqG~tVdp~~~nY~cs~~-dg~iAiwD 223 (783)
T KOG1008|consen 179 HIFDLRQSLDSVSSV---NTKY-VQGITVDPFSPNYFCSNS-DGDIAIWD 223 (783)
T ss_pred hhhhhhhhhhhhhhh---hhhh-cccceecCCCCCceeccc-cCceeecc
Confidence 99999843222 222 1111 56677777 666666555 99999999
No 355
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=97.21 E-value=0.061 Score=41.16 Aligned_cols=79 Identities=13% Similarity=0.123 Sum_probs=57.9
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEE----EeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 54 EGTITCLKFTPEGSHLISCSDDGSIAIF----RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~----d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
...|.++.|.++...++.+..+|.|.+. +....... .. ..-..+ |.+++|+||+..++..+.++++.+.+ ++
T Consensus 75 ~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E-~V-G~vd~G-I~a~~WSPD~Ella~vT~~~~l~~mt-~~ 150 (928)
T PF04762_consen 75 NDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIE-IV-GSVDSG-ILAASWSPDEELLALVTGEGNLLLMT-RD 150 (928)
T ss_pred CCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeE-EE-EEEcCc-EEEEEECCCcCEEEEEeCCCEEEEEe-cc
Confidence 4678999999999999999999999988 44433322 22 122333 99999999999999999999888774 45
Q ss_pred CceeEEE
Q psy11518 130 GRSAYIT 136 (139)
Q Consensus 130 ~~~~~~~ 136 (139)
..++...
T Consensus 151 fd~i~E~ 157 (928)
T PF04762_consen 151 FDPISEV 157 (928)
T ss_pred ceEEEEe
Confidence 5555443
No 356
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=97.18 E-value=0.03 Score=38.95 Aligned_cols=95 Identities=22% Similarity=0.311 Sum_probs=59.6
Q ss_pred CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCc--EEEEEeCCceEEEEEEeCCCCcceeEEEEccCC
Q psy11518 34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGS--IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG 110 (139)
Q Consensus 34 ~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 110 (139)
..+.++++++++....+. ..+.-..-+|+|+|+.++ +...||. |.+.|+....... + ....+. -..-.|+|||
T Consensus 218 ~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~~-L-t~~~gi-~~~Ps~spdG 293 (425)
T COG0823 218 PRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLPR-L-TNGFGI-NTSPSWSPDG 293 (425)
T ss_pred ceEEEEeccCCccceeec-cCCccCCccCCCCCCEEEEEECCCCCccEEEEcCCCCccee-c-ccCCcc-ccCccCCCCC
Confidence 568888988876544443 122234568999998876 5556665 6677887776444 3 122222 2367899999
Q ss_pred cEEEEEcC-CCe--EEEEEcCCCce
Q psy11518 111 KLALSVGK-DKT--LRTWNLVKGRS 132 (139)
Q Consensus 111 ~~l~~~~~-d~~--i~i~d~~~~~~ 132 (139)
++++-.++ .|+ |.++|++.+..
T Consensus 294 ~~ivf~Sdr~G~p~I~~~~~~g~~~ 318 (425)
T COG0823 294 SKIVFTSDRGGRPQIYLYDLEGSQV 318 (425)
T ss_pred CEEEEEeCCCCCcceEEECCCCCce
Confidence 98886654 444 66666665544
No 357
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.15 E-value=0.0025 Score=42.99 Aligned_cols=84 Identities=12% Similarity=0.117 Sum_probs=54.2
Q ss_pred CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCC---------------
Q psy11518 33 DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHK--------------- 97 (139)
Q Consensus 33 ~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~--------------- 97 (139)
.+.+.+||+++++....... ...+....|+|+|+.++-.. ++.|.+.+..++........+..
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~-~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv 99 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP-PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEV 99 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E-ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHT
T ss_pred ceeEEEEecCCCceEECcCC-ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEEcCccceeccccc
Confidence 45788999988754433332 45678889999999988764 56899998877755443321200
Q ss_pred CcceeEEEEccCCcEEEEEcC
Q psy11518 98 GTAVNHISIHPSGKLALSVGK 118 (139)
Q Consensus 98 ~~~v~~~~~~~~~~~l~~~~~ 118 (139)
-..-..+.|+||+++|+....
T Consensus 100 ~~~~~~~~WSpd~~~la~~~~ 120 (353)
T PF00930_consen 100 FDRRSAVWWSPDSKYLAFLRF 120 (353)
T ss_dssp SSSSBSEEE-TTSSEEEEEEE
T ss_pred cccccceEECCCCCEEEEEEE
Confidence 011356889999999887653
No 358
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.10 E-value=0.038 Score=38.63 Aligned_cols=55 Identities=24% Similarity=0.233 Sum_probs=25.6
Q ss_pred CCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 66 GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 66 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
|..|...+.+ .|.+||..+++.+..+. .. +|..+.|++++.+++..+.+ .+.|++
T Consensus 117 G~LL~~~~~~-~i~~yDw~~~~~i~~i~---v~-~vk~V~Ws~~g~~val~t~~-~i~il~ 171 (443)
T PF04053_consen 117 GNLLGVKSSD-FICFYDWETGKLIRRID---VS-AVKYVIWSDDGELVALVTKD-SIYILK 171 (443)
T ss_dssp SSSEEEEETT-EEEEE-TTT--EEEEES---S--E-EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred CcEEEEECCC-CEEEEEhhHcceeeEEe---cC-CCcEEEEECCCCEEEEEeCC-eEEEEE
Confidence 4444444333 56666666666666651 11 15666677666666666544 455544
No 359
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.08 E-value=0.039 Score=36.70 Aligned_cols=99 Identities=14% Similarity=0.120 Sum_probs=62.8
Q ss_pred EEEcc-CCceeeEEEecCCCeEEEEECCCCCEEEEecC-CCcEEEEEeCC--c----eEEEEEEeCCCCcceeEEEEccC
Q psy11518 38 LYDMV-KRKQSGALMQHEGTITCLKFTPEGSHLISCSD-DGSIAIFRVGS--W----QLEKLFKKAHKGTAVNHISIHPS 109 (139)
Q Consensus 38 i~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~--~----~~~~~~~~~~~~~~v~~~~~~~~ 109 (139)
+|-+. .+.....+..+-..-+.++|||+++.|..... .+.|.-+++.. + +..... ........-.++...+
T Consensus 145 lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d~~~g~~~~~~~~~~-~~~~~G~PDG~~vDad 223 (307)
T COG3386 145 LYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIHRYDLDPATGPIGGRRGFVD-FDEEPGLPDGMAVDAD 223 (307)
T ss_pred EEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEEEEecCcccCccCCcceEEE-ccCCCCCCCceEEeCC
Confidence 44443 44444444444445578999999987766544 57788887652 1 111222 2222233677888888
Q ss_pred CcEEEEEcCCC-eEEEEEcCCCceeEEEec
Q psy11518 110 GKLALSVGKDK-TLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 110 ~~~l~~~~~d~-~i~i~d~~~~~~~~~~~~ 138 (139)
|.+-+++..+| .|..|+.. ++.+..+.+
T Consensus 224 G~lw~~a~~~g~~v~~~~pd-G~l~~~i~l 252 (307)
T COG3386 224 GNLWVAAVWGGGRVVRFNPD-GKLLGEIKL 252 (307)
T ss_pred CCEEEecccCCceEEEECCC-CcEEEEEEC
Confidence 98776555554 89999998 888877764
No 360
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.08 E-value=0.016 Score=38.84 Aligned_cols=58 Identities=14% Similarity=0.264 Sum_probs=43.2
Q ss_pred cEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCc-EEEE-EcCCCeEEEEEcCCCceeEEEe
Q psy11518 77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK-LALS-VGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 77 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~-~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.|.++|+.+++.+..+...+. +.+++.+.+.+ +|++ ...++.+.+||..+|+.+..+.
T Consensus 270 eVWv~D~~t~krv~Ri~l~~~---~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPLEHP---IDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp EEEEEETTTTEEEEEEEEEEE---ESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE-
T ss_pred EEEEEECCCCeEEEEEeCCCc---cceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehh
Confidence 477889999998888855433 77899998776 5554 4568999999999999988753
No 361
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.93 E-value=0.031 Score=40.54 Aligned_cols=97 Identities=7% Similarity=0.105 Sum_probs=53.5
Q ss_pred EEecCCcEEEEeC------CCC--eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCC-CcEEEE--------
Q psy11518 19 SVAATSKLAASSG------ADE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD-GSIAIF-------- 81 (139)
Q Consensus 19 ~~~~~~~~l~~~~------~~~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~~~-------- 81 (139)
.++++|+.++... .|. .|.+++. .+.. ..+.. ....+.-+|+|+|..+.+.... ..+.+.
T Consensus 356 aiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~-gg~~-~~lt~-g~~~t~PsWspDG~~lw~v~dg~~~~~v~~~~~~gql 432 (591)
T PRK13616 356 ALSRSGRQVAAVVTLGRGAPDPASSLWVGPL-GGVA-VQVLE-GHSLTRPSWSLDADAVWVVVDGNTVVRVIRDPATGQL 432 (591)
T ss_pred eECCCCCEEEEEEeecCCCCCcceEEEEEeC-CCcc-eeeec-CCCCCCceECCCCCceEEEecCcceEEEeccCCCceE
Confidence 4556777765444 233 5555554 2222 22221 1236788999998877665432 222222
Q ss_pred ---EeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEE
Q psy11518 82 ---RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (139)
Q Consensus 82 ---d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 124 (139)
+++.+.... .....|..+.|+|||..++... +++|.+
T Consensus 433 ~~~~vd~ge~~~-----~~~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 433 ARTPVDASAVAS-----RVPGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred EEEeccCchhhh-----ccCCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 332222211 1122399999999999887655 467766
No 362
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=96.91 E-value=0.11 Score=38.98 Aligned_cols=115 Identities=12% Similarity=0.132 Sum_probs=73.2
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCC--------eEEEEEC----------------CCCCEEEEecCCCcE
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT--------ITCLKFT----------------PEGSHLISCSDDGSI 78 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~--------v~~~~~~----------------~~~~~l~~~~~d~~i 78 (139)
.+..++.++.++.|.-.|..+++.+..+...... ...+++- ..+..++.++.|+.+
T Consensus 193 vgg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~L 272 (764)
T TIGR03074 193 VGDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARL 272 (764)
T ss_pred ECCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeE
Confidence 4667777888899999999999988877632211 1112221 123477788889999
Q ss_pred EEEEeCCceEEEEEEeCCCC-------c-c--eeEEEEcc--CCcEEEEEcC----------CCeEEEEEcCCCceeEEE
Q psy11518 79 AIFRVGSWQLEKLFKKAHKG-------T-A--VNHISIHP--SGKLALSVGK----------DKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~~~~~~-------~-~--v~~~~~~~--~~~~l~~~~~----------d~~i~i~d~~~~~~~~~~ 136 (139)
.-.|.++++....+...... . + -..+.-.| .+..+++|+. +|.|+-+|.++|+.+..+
T Consensus 273 iALDA~TGk~~W~fg~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~ 352 (764)
T TIGR03074 273 IALDADTGKLCEDFGNNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW 352 (764)
T ss_pred EEEECCCCCEEEEecCCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence 99999999998876322110 0 0 00111112 2334555532 688999999999998876
Q ss_pred e
Q psy11518 137 N 137 (139)
Q Consensus 137 ~ 137 (139)
.
T Consensus 353 ~ 353 (764)
T TIGR03074 353 D 353 (764)
T ss_pred e
Confidence 4
No 363
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=96.88 E-value=0.075 Score=36.70 Aligned_cols=111 Identities=16% Similarity=0.154 Sum_probs=66.2
Q ss_pred EEEecCCcEEEEe-----CCCCeEEEEEccCCceeeEE-EecCCCeEEEEECCCCCEEEEecCCC-----------cEEE
Q psy11518 18 RSVAATSKLAASS-----GADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPEGSHLISCSDDG-----------SIAI 80 (139)
Q Consensus 18 ~~~~~~~~~l~~~-----~~~~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~-----------~i~~ 80 (139)
..+++++++++.+ +....++++|+++++.+... ..- ....+.|.++++.++....+. .|..
T Consensus 129 ~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~--~~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~~ 206 (414)
T PF02897_consen 129 FSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENP--KFSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVYR 206 (414)
T ss_dssp EEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEE--ESEEEEECTTSSEEEEEECSTTTSS-CCGCCEEEEE
T ss_pred eeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccc--ccceEEEeCCCCEEEEEEeCcccccccCCCCcEEEE
Confidence 4556689988744 22346999999999776532 222 123499999988775443222 3677
Q ss_pred EEeCCceE--EEEEEeCCCCcceeEEEEccCCcEEEEEc---CC-CeEEEEEcCCC
Q psy11518 81 FRVGSWQL--EKLFKKAHKGTAVNHISIHPSGKLALSVG---KD-KTLRTWNLVKG 130 (139)
Q Consensus 81 ~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d-~~i~i~d~~~~ 130 (139)
|.+.+... ...+...........+..++++++++... .+ ..+.+.|+..+
T Consensus 207 ~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~ 262 (414)
T PF02897_consen 207 HKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDG 262 (414)
T ss_dssp EETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCT
T ss_pred EECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEecccc
Confidence 77765542 23332222211145788899999877543 23 45888888775
No 364
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=96.88 E-value=0.011 Score=27.02 Aligned_cols=30 Identities=10% Similarity=0.061 Sum_probs=24.9
Q ss_pred eeEEEEccCC---cEEEEEcCCCeEEEEEcCCC
Q psy11518 101 VNHISIHPSG---KLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 101 v~~~~~~~~~---~~l~~~~~d~~i~i~d~~~~ 130 (139)
+.++.|+|+. .+|+-+-..+.+.++|+++.
T Consensus 3 vR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 3 VRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRSN 35 (43)
T ss_pred eEEEEeCCCCCcccEEEEEccCCeEEEEEcccC
Confidence 8899999844 47888878899999999953
No 365
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=96.87 E-value=0.044 Score=35.32 Aligned_cols=78 Identities=15% Similarity=0.224 Sum_probs=53.4
Q ss_pred EEecCCCeEEEEECCCC-CEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 50 LMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 50 ~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
+.+-...++.++|+|+. .++++....+.|..++. +++.+..+.....+. ...+++..++.++++.-.++.+.++++.
T Consensus 17 l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D-~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 17 LPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGD-YEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp -TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SS-EEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred CCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCC-ceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 33444569999999974 46678888888888886 578888886665555 8899999888888777678999999884
Q ss_pred C
Q psy11518 129 K 129 (139)
Q Consensus 129 ~ 129 (139)
.
T Consensus 95 ~ 95 (248)
T PF06977_consen 95 D 95 (248)
T ss_dssp -
T ss_pred c
Confidence 3
No 366
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.84 E-value=0.079 Score=36.36 Aligned_cols=118 Identities=16% Similarity=0.240 Sum_probs=80.2
Q ss_pred EEEEecCCcEEEEeCC---CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEe-cCCCcEEEEEeCCceEEE-E
Q psy11518 17 VRSVAATSKLAASSGA---DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQLEK-L 91 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~-~ 91 (139)
-..+.++++.+.++.. ++.+.+.|..+.+.+.....-..+ ..++++|++..+... ..++.|.++|........ .
T Consensus 120 ~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~ 198 (381)
T COG3391 120 GLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGS 198 (381)
T ss_pred eEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccc
Confidence 3445557766666655 689999999888887775443344 789999999966555 478889999977655543 1
Q ss_pred EE-eCCCCcceeEEEEccCCcEEEEEcCC---CeEEEEEcCCCceeEE
Q psy11518 92 FK-KAHKGTAVNHISIHPSGKLALSVGKD---KTLRTWNLVKGRSAYI 135 (139)
Q Consensus 92 ~~-~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~~~ 135 (139)
-. ..........+.++|++..+.+.... +.+...|..++.....
T Consensus 199 ~~~~~~~~~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~ 246 (381)
T COG3391 199 VGSLVGVGTGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTAT 246 (381)
T ss_pred cccccccCCCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEe
Confidence 00 01112226779999999966655433 6899999988766543
No 367
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=96.82 E-value=0.03 Score=31.26 Aligned_cols=64 Identities=16% Similarity=0.172 Sum_probs=40.2
Q ss_pred eEEEEECC---C-CCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 57 ITCLKFTP---E-GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 57 v~~~~~~~---~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
|+++++.. + .+.|+.|+.|..|++|+-. +.+..+. ... .|..++-... ..++.+-.+|+|-+|+
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~--e~~~Ei~--e~~-~v~~L~~~~~-~~F~Y~l~NGTVGvY~ 69 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGD--EIVAEIT--ETD-KVTSLCSLGG-GRFAYALANGTVGVYD 69 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCC--cEEEEEe--ccc-ceEEEEEcCC-CEEEEEecCCEEEEEe
Confidence 45555543 3 2578999999999999843 4555552 222 2777776655 4566666666555544
No 368
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=96.81 E-value=0.063 Score=34.80 Aligned_cols=110 Identities=9% Similarity=-0.015 Sum_probs=69.8
Q ss_pred CCcEEEEeCCCC--eEEEEEccCCceeeEEEecC-CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCc
Q psy11518 23 TSKLAASSGADE--TVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT 99 (139)
Q Consensus 23 ~~~~l~~~~~~~--~v~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 99 (139)
++.++-+.+.-| .|+.+|+.+++......-.. -.-..++.. +.+...-.-.++...+||..+.+.+..+.....
T Consensus 55 ~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~-~d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~~E-- 131 (264)
T PF05096_consen 55 DGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITIL-GDKLYQLTWKEGTGFVYDPNTLKKIGTFPYPGE-- 131 (264)
T ss_dssp TTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEE-SSS--
T ss_pred CCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEE-CCEEEEEEecCCeEEEEccccceEEEEEecCCc--
Confidence 566666666544 89999999998765544211 111223332 334444556788999999999999888865544
Q ss_pred ceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 100 AVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 100 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
=+.++ .+++.|+.......++++|..+.+.+..+.+
T Consensus 132 -GWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V 167 (264)
T PF05096_consen 132 -GWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQV 167 (264)
T ss_dssp ---EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-
T ss_pred -ceEEE--cCCCEEEEECCccceEEECCcccceEEEEEE
Confidence 35666 4677777777778999999998888777654
No 369
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=96.78 E-value=0.0072 Score=44.82 Aligned_cols=67 Identities=15% Similarity=0.258 Sum_probs=50.6
Q ss_pred eEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 16 SVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 16 ~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
.+.|++- ...+||+|+.+|.|++||-...+....+.+-..+|..+..+.+|++++..+.. .|.+++.
T Consensus 579 ~Fs~~aTt~~G~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~t-yLlLi~t 646 (794)
T PF08553_consen 579 NFSCFATTEDGYIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATCKT-YLLLIDT 646 (794)
T ss_pred CceEEEecCCceEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEeecc-eEEEEEE
Confidence 4555555 66689999999999999954334344566778999999999999998765544 5777775
No 370
>KOG2395|consensus
Probab=96.76 E-value=0.042 Score=38.90 Aligned_cols=96 Identities=19% Similarity=0.237 Sum_probs=62.4
Q ss_pred EEeCCCCeEEEEEccCCc--eeeEEEecC----CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcce
Q psy11518 28 ASSGADETVVLYDMVKRK--QSGALMQHE----GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV 101 (139)
Q Consensus 28 ~~~~~~~~v~i~~~~~~~--~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v 101 (139)
+.|-.+..|.-||++-.. .+...++|+ ....|.+-. ..-+++.|+.+|.|++||- .+..-... .+.-+.+|
T Consensus 398 lvGLs~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT-~sG~IvvgS~~GdIRLYdr-i~~~AKTA-lPgLG~~I 474 (644)
T KOG2395|consen 398 LVGLSDNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATT-ESGYIVVGSLKGDIRLYDR-IGRRAKTA-LPGLGDAI 474 (644)
T ss_pred EEeecCCceEEecccccCcceeeeeeccccccccccceeeec-CCceEEEeecCCcEEeehh-hhhhhhhc-ccccCCce
Confidence 456678889999986432 222223332 233444433 3447899999999999996 44433333 45666779
Q ss_pred eEEEEccCCcEEEEEcCCCeEEEEEc
Q psy11518 102 NHISIHPSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 102 ~~~~~~~~~~~l~~~~~d~~i~i~d~ 127 (139)
..+..+.+|++|+..+. ..+.+.++
T Consensus 475 ~hVdvtadGKwil~Tc~-tyLlLi~t 499 (644)
T KOG2395|consen 475 KHVDVTADGKWILATCK-TYLLLIDT 499 (644)
T ss_pred eeEEeeccCcEEEEecc-cEEEEEEE
Confidence 99999999999887664 45555554
No 371
>KOG3617|consensus
Probab=96.74 E-value=0.0024 Score=47.23 Aligned_cols=66 Identities=14% Similarity=0.195 Sum_probs=54.9
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
|+.|..-.|+.|-+-|.+.+|...+.+.......|..+|..+.||++|..+.++..-|.+.+|...
T Consensus 66 CWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 66 CWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred ccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 333355567788889999999987776666666799999999999999999999999999999875
No 372
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=96.68 E-value=0.053 Score=37.96 Aligned_cols=55 Identities=16% Similarity=0.299 Sum_probs=22.4
Q ss_pred CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 24 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
|.+|...+. +.|.+||.++++.+..+... +|..+.|++++++++..+.+ .+.+++
T Consensus 117 G~LL~~~~~-~~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~~val~t~~-~i~il~ 171 (443)
T PF04053_consen 117 GNLLGVKSS-DFICFYDWETGKLIRRIDVS--AVKYVIWSDDGELVALVTKD-SIYILK 171 (443)
T ss_dssp SSSEEEEET-TEEEEE-TTT--EEEEESS---E-EEEEE-TTSSEEEEE-S--SEEEEE
T ss_pred CcEEEEECC-CCEEEEEhhHcceeeEEecC--CCcEEEEECCCCEEEEEeCC-eEEEEE
Confidence 444443332 24555555555555554421 24555555555555555433 344444
No 373
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=96.62 E-value=0.091 Score=34.09 Aligned_cols=103 Identities=20% Similarity=0.216 Sum_probs=62.3
Q ss_pred CCcEEEEeCCCCeEEEEEccCC-ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEE---------
Q psy11518 23 TSKLAASSGADETVVLYDMVKR-KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF--------- 92 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~--------- 92 (139)
.++.|+.|+.+| +.+++.... ......+ ...|..+...|+-+.++.-+ |+.+.++++.........
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~ 81 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSR 81 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccc
Confidence 678899999998 888988333 3333322 23489999988877766554 489999998765433311
Q ss_pred ----EeCCCCcceeEEE--EccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 93 ----KKAHKGTAVNHIS--IHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 93 ----~~~~~~~~v~~~~--~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
......+ +...+ -...+...++....++|.+|.....
T Consensus 82 ~~~~~~~~~~~-v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~ 124 (275)
T PF00780_consen 82 SLPTKLPETKG-VSFFAVNGGHEGSRRLCVAVKKKILIYEWNDP 124 (275)
T ss_pred cccccccccCC-eeEEeeccccccceEEEEEECCEEEEEEEECC
Confidence 1111112 33333 1234444445555568999887653
No 374
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=96.62 E-value=0.13 Score=37.55 Aligned_cols=71 Identities=14% Similarity=0.131 Sum_probs=49.3
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEc--cCCcEEEEEcCCCeEEEEEc
Q psy11518 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIH--PSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~i~d~ 127 (139)
..+.+.-+.-++..+.-+....+.+||.+.+...........+. |.+++|. |+++.+++.|..+.|.+|.-
T Consensus 31 ~~~li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~-I~dLDWtst~d~qsiLaVGf~~~v~l~~Q 103 (631)
T PF12234_consen 31 NPSLISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDP-IRDLDWTSTPDGQSILAVGFPHHVLLYTQ 103 (631)
T ss_pred CcceEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCc-eeeceeeecCCCCEEEEEEcCcEEEEEEc
Confidence 34445445544544454445579999999888665553333444 9999987 58899999999999999853
No 375
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.61 E-value=0.078 Score=34.85 Aligned_cols=98 Identities=12% Similarity=0.236 Sum_probs=65.8
Q ss_pred EEecCCcEEEEeCC-----CCeEEEEEccCC-ceeeEEEecCCCeEEEEECCCCCEEEEecC------------------
Q psy11518 19 SVAATSKLAASSGA-----DETVVLYDMVKR-KQSGALMQHEGTITCLKFTPEGSHLISCSD------------------ 74 (139)
Q Consensus 19 ~~~~~~~~l~~~~~-----~~~v~i~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------ 74 (139)
++++||.+|++.-. -|.|-+||...+ +.+.++..|.-....+.|.+||+.++.+..
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsM 199 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSM 199 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhc
Confidence 45558888876543 468999998754 556778888777788999999999887653
Q ss_pred CCcEEEEEeCCceEEEEEEeC--CCCcceeEEEEccCCcEEEEE
Q psy11518 75 DGSIAIFRVGSWQLEKLFKKA--HKGTAVNHISIHPSGKLALSV 116 (139)
Q Consensus 75 d~~i~~~d~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~ 116 (139)
.-.+.+.|..++.++.+...+ .+.-++..++..+||...+-+
T Consensus 200 ePSlvlld~atG~liekh~Lp~~l~~lSiRHld~g~dgtvwfgc 243 (366)
T COG3490 200 EPSLVLLDAATGNLIEKHTLPASLRQLSIRHLDIGRDGTVWFGC 243 (366)
T ss_pred CccEEEEeccccchhhhccCchhhhhcceeeeeeCCCCcEEEEE
Confidence 113444555556555544333 233348889998888766544
No 376
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=96.56 E-value=0.053 Score=38.93 Aligned_cols=75 Identities=16% Similarity=0.330 Sum_probs=46.0
Q ss_pred CCCCEEEEecCCCcEEEEEeCC----ceEEEE-EEeCC-------------------CCcceeEEEEcc----CCcEEEE
Q psy11518 64 PEGSHLISCSDDGSIAIFRVGS----WQLEKL-FKKAH-------------------KGTAVNHISIHP----SGKLALS 115 (139)
Q Consensus 64 ~~~~~l~~~~~d~~i~~~d~~~----~~~~~~-~~~~~-------------------~~~~v~~~~~~~----~~~~l~~ 115 (139)
++...++.+..||.+....... +..... ..... .......++.++ +..++++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 3666788888899888777654 211111 11110 112245566666 7789999
Q ss_pred EcCCCeEEEEEcCCCceeEEEec
Q psy11518 116 VGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 116 ~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.+.|+.+++||+.+++.+....+
T Consensus 236 l~~D~~LRiW~l~t~~~~~~~~~ 258 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLATIDL 258 (547)
T ss_dssp EETTSEEEEEETTTTCEEEEEET
T ss_pred EeCCCeEEEEECCCCeEEEEecc
Confidence 99999999999999999776643
No 377
>KOG1920|consensus
Probab=96.54 E-value=0.17 Score=39.23 Aligned_cols=68 Identities=16% Similarity=0.207 Sum_probs=52.9
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEE
Q psy11518 55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125 (139)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 125 (139)
..|.++.|..+.+.++.+...|.|.+-|..+....-.- .. ..+ |.+++|+||+++++..+.++++.+-
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg-~v-d~G-I~aaswS~Dee~l~liT~~~tll~m 136 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEIVG-NV-DNG-ISAASWSPDEELLALITGRQTLLFM 136 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceeeee-ec-cCc-eEEEeecCCCcEEEEEeCCcEEEEE
Confidence 57999999999999999999999999887665443322 22 233 9999999999999998887776553
No 378
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.54 E-value=0.073 Score=34.97 Aligned_cols=81 Identities=9% Similarity=0.161 Sum_probs=63.1
Q ss_pred ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 52 QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 52 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
+-...++++.|+|+.+.|.+......-.++=..+|+.+..+....-.. ...+.+..++++.++--.++.+.++.+....
T Consensus 83 g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~D-pE~Ieyig~n~fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 83 GETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSD-PETIEYIGGNQFVIVDERDRALYLFTVDADT 161 (316)
T ss_pred cccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCC-hhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence 444568999999999988888777777777777899998886555444 6778888888888887778889888877664
Q ss_pred ee
Q psy11518 132 SA 133 (139)
Q Consensus 132 ~~ 133 (139)
.+
T Consensus 162 ~~ 163 (316)
T COG3204 162 TV 163 (316)
T ss_pred cE
Confidence 33
No 379
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.42 E-value=0.14 Score=33.99 Aligned_cols=104 Identities=13% Similarity=0.144 Sum_probs=55.0
Q ss_pred eeEEEEe--cCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE-E
Q psy11518 15 ASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK-L 91 (139)
Q Consensus 15 ~~v~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~-~ 91 (139)
..+..+. .+|.+++++.....+.-||.-...=...-..-...|..+.|.|++.....+ ..|.|..=+........ .
T Consensus 145 gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~~~~~~~~w~~ 223 (302)
T PF14870_consen 145 GSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQFSDDPDDGETWSE 223 (302)
T ss_dssp --EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE-TTEEEEE--
T ss_pred ceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEEccCCCCcccccc
Confidence 4444544 388999999888888888753221111112235689999999998876655 77888877622221111 1
Q ss_pred --EEeCCCCcceeEEEEccCCcEEEEEcCC
Q psy11518 92 --FKKAHKGTAVNHISIHPSGKLALSVGKD 119 (139)
Q Consensus 92 --~~~~~~~~~v~~~~~~~~~~~l~~~~~d 119 (139)
.........+..++|.++....++|+..
T Consensus 224 ~~~~~~~~~~~~ld~a~~~~~~~wa~gg~G 253 (302)
T PF14870_consen 224 PIIPIKTNGYGILDLAYRPPNEIWAVGGSG 253 (302)
T ss_dssp -B-TTSS--S-EEEEEESSSS-EEEEESTT
T ss_pred ccCCcccCceeeEEEEecCCCCEEEEeCCc
Confidence 1111222237889999887777766543
No 380
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.40 E-value=0.14 Score=37.38 Aligned_cols=70 Identities=14% Similarity=0.180 Sum_probs=41.3
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEE---EEeCCceEEE----EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 54 EGTITCLKFTPEGSHLISCSDDGSIAI---FRVGSWQLEK----LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d~~i~~---~d~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
...|..+.|+|||..++... ++.|.+ -....+...- .+ .......+.++.|..++.++ ++..++...+|.
T Consensus 447 ~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~~~l-~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~ 523 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNPREV-GPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWY 523 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeecccEEe-ecccCCccccceEecCCEEE-EEecCCCCceEE
Confidence 45799999999999887654 466766 4434443111 12 11222225789999998855 444433333443
No 381
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=96.38 E-value=0.19 Score=34.82 Aligned_cols=81 Identities=20% Similarity=0.212 Sum_probs=52.4
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE------------------------------------------EEEE
Q psy11518 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE------------------------------------------KLFK 93 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~------------------------------------------~~~~ 93 (139)
.|+.++|.++..-|+.+...|.+.+|.....+.. ..+-
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 4677788877777788888888777754221110 1110
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.. ..++|++++.+ |=-+++.|.++|.+.|.|+|....++...+
T Consensus 83 ~~-~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i 125 (395)
T PF08596_consen 83 DA-KQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENI 125 (395)
T ss_dssp ----S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEG
T ss_pred ec-cCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccc
Confidence 11 23448888876 666999999999999999998888877543
No 382
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=96.32 E-value=0.087 Score=33.32 Aligned_cols=71 Identities=13% Similarity=0.123 Sum_probs=50.6
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEE-------E-------ecCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYDMVKRKQSGAL-------M-------QHEGTITCLKFTPEGSHLISCSDDGSIAIF 81 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~-------~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 81 (139)
++..+..+++++++-+.+|.+++||+.+.+.+..- . .....|..+..+.+|.-+++-+ +|....|
T Consensus 14 ~~~~l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y 92 (219)
T PF07569_consen 14 PVSFLECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSY 92 (219)
T ss_pred ceEEEEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEe
Confidence 44556668999999999999999999887654321 1 2446678888888887766554 5678888
Q ss_pred EeCCce
Q psy11518 82 RVGSWQ 87 (139)
Q Consensus 82 d~~~~~ 87 (139)
+..-+.
T Consensus 93 ~~~L~~ 98 (219)
T PF07569_consen 93 SPDLGC 98 (219)
T ss_pred ccccce
Confidence 765433
No 383
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=96.23 E-value=0.17 Score=32.90 Aligned_cols=112 Identities=16% Similarity=0.190 Sum_probs=75.8
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcc--
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA-- 100 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~-- 100 (139)
++++..-.-.++...+||..+-+.+.++.... .=..++ .++..|+..+....|.++|..+.+....+.....+.+
T Consensus 99 ~d~l~qLTWk~~~~f~yd~~tl~~~~~~~y~~-EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~ 175 (264)
T PF05096_consen 99 GDKLYQLTWKEGTGFVYDPNTLKKIGTFPYPG-EGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVS 175 (264)
T ss_dssp TTEEEEEESSSSEEEEEETTTTEEEEEEE-SS-S--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE--
T ss_pred CCEEEEEEecCCeEEEEccccceEEEEEecCC-cceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECC
Confidence 44455555678899999999998888886543 225555 4677888888888999999988877776644433333
Q ss_pred -eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 101 -VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 101 -v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+..+.|- +|...+-.=....|...|..+|+.+..+.+
T Consensus 176 ~LNELE~i-~G~IyANVW~td~I~~Idp~tG~V~~~iDl 213 (264)
T PF05096_consen 176 NLNELEYI-NGKIYANVWQTDRIVRIDPETGKVVGWIDL 213 (264)
T ss_dssp -EEEEEEE-TTEEEEEETTSSEEEEEETTT-BEEEEEE-
T ss_pred CcEeEEEE-cCEEEEEeCCCCeEEEEeCCCCeEEEEEEh
Confidence 4556665 677777666777888999999999887765
No 384
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=96.21 E-value=0.23 Score=34.17 Aligned_cols=110 Identities=13% Similarity=0.238 Sum_probs=77.7
Q ss_pred EecCCc-EEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC---CCcEEEEEeCCceEEEEEEeC
Q psy11518 20 VAATSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD---DGSIAIFRVGSWQLEKLFKKA 95 (139)
Q Consensus 20 ~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~~~~~~~~~~ 95 (139)
+.+.+. ..+....++.|.+.|..+.+......--. ....++++|++..+..+.. ++.+.+.|..+....... ..
T Consensus 81 v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~-~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~-~v 158 (381)
T COG3391 81 VNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGL-GPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATI-PV 158 (381)
T ss_pred eCCCCCeEEEecCCCCeEEEEcCcccceeeEeeecc-CCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEE-ec
Confidence 334455 44455556889999977777666554333 4478899999877765544 688999999888887775 33
Q ss_pred CCCcceeEEEEccCCcEEEEEc-CCCeEEEEEcCCCcee
Q psy11518 96 HKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRSA 133 (139)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~ 133 (139)
.. . ...+++.|+|+.++... .++.|.++|.......
T Consensus 159 G~-~-P~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~ 195 (381)
T COG3391 159 GN-T-PTGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVV 195 (381)
T ss_pred CC-C-cceEEECCCCCeEEEEecCCCeEEEEeCCCccee
Confidence 22 2 38899999999666555 7899999997765544
No 385
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=96.18 E-value=0.25 Score=34.36 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=31.0
Q ss_pred cceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 99 TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 99 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+++..++.||++++++.-..+|.+.+.+..-.+....+.
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~ 255 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFD 255 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEee
Confidence 348999999999999999999999888766555554443
No 386
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=95.96 E-value=0.2 Score=34.33 Aligned_cols=98 Identities=16% Similarity=0.218 Sum_probs=49.6
Q ss_pred EEccCCceeeEEEecCCCeEEE-----EECCCCCEEE-EecCCC--cEEEEEeCCceEEEEEEeCCCCcceeEEEEccCC
Q psy11518 39 YDMVKRKQSGALMQHEGTITCL-----KFTPEGSHLI-SCSDDG--SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSG 110 (139)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~v~~~-----~~~~~~~~l~-~~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 110 (139)
-|..+|..+..+.........+ +|.++|+.|+ .+..+| .+...|+.+++..+....+.. ......++|++
T Consensus 15 ~D~~TG~~VtrLT~~~~~~h~~YF~~~~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~--~~~g~~~s~~~ 92 (386)
T PF14583_consen 15 IDPDTGHRVTRLTPPDGHSHRLYFYQNCFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGD--NTFGGFLSPDD 92 (386)
T ss_dssp E-TTT--EEEE-S-TTS-EE---TTS--B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B---TTT-EE-TTS
T ss_pred eCCCCCceEEEecCCCCcccceeecCCCcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCC--CccceEEecCC
Confidence 4667777776665443322222 4567887654 555555 477778888887776632222 13356678888
Q ss_pred cEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 111 KLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 111 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+.++-.-....|.-.|+++.+....+.+
T Consensus 93 ~~~~Yv~~~~~l~~vdL~T~e~~~vy~~ 120 (386)
T PF14583_consen 93 RALYYVKNGRSLRRVDLDTLEERVVYEV 120 (386)
T ss_dssp SEEEEEETTTEEEEEETTT--EEEEEE-
T ss_pred CeEEEEECCCeEEEEECCcCcEEEEEEC
Confidence 8876665567888999999887655543
No 387
>KOG2444|consensus
Probab=95.96 E-value=0.028 Score=35.41 Aligned_cols=70 Identities=19% Similarity=0.147 Sum_probs=47.4
Q ss_pred eEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecC-CCeEEEEECCCCCEEEEe--cCCCcEEEEEeCC
Q psy11518 16 SVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHLISC--SDDGSIAIFRVGS 85 (139)
Q Consensus 16 ~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~--~~d~~i~~~d~~~ 85 (139)
.+.+.-+ ++.+..++..++.++.|+...++.+...-.|. .++.....+..++.++.. +.|..++.|++..
T Consensus 103 ~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 103 SIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred cceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 4445555 55688899999999999998888776666665 444444445555556555 6666677777643
No 388
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=95.83 E-value=0.52 Score=35.10 Aligned_cols=103 Identities=11% Similarity=0.099 Sum_probs=68.8
Q ss_pred CCcEEEEeCCCCeEEEEEccCC--------------------ceeeEEEecCCCeEEEEEC--CCCCEEEEecCCCcEEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKR--------------------KQSGALMQHEGTITCLKFT--PEGSHLISCSDDGSIAI 80 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~--------------------~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~~ 80 (139)
+.+.|+.+..||.|.+|..++- ++...+. ....++.++++ ...+++|+++....|.+
T Consensus 113 ~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTV 191 (717)
T PF08728_consen 113 GEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTV 191 (717)
T ss_pred CeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEE
Confidence 7778999999999999976321 0112222 34567888888 77888998888888888
Q ss_pred EEeCCceEEEEE--EeCCCCcceeEEEEccCC---c---EEEEEcCCCeEEEEEc
Q psy11518 81 FRVGSWQLEKLF--KKAHKGTAVNHISIHPSG---K---LALSVGKDKTLRTWNL 127 (139)
Q Consensus 81 ~d~~~~~~~~~~--~~~~~~~~v~~~~~~~~~---~---~l~~~~~d~~i~i~d~ 127 (139)
|-.......... ...+. ..|.+++|-++. . ++++++-.|.+.+|++
T Consensus 192 Faf~l~~~r~~~~~s~~~~-hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 192 FAFALVDERFYHVPSHQHS-HNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EEEeccccccccccccccc-cCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 765432111111 11122 238889988744 2 7778888999999888
No 389
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=95.80 E-value=0.36 Score=32.98 Aligned_cols=112 Identities=9% Similarity=-0.032 Sum_probs=69.4
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecC--CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcc
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHE--GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA 100 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 100 (139)
.+..+.++..+|.|.-.|..+++.+.....-. ..+..-.+..+|+ +..++.++.+..+|.++++..+...... ...
T Consensus 67 ~dg~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~-i~~g~~~g~~y~ld~~~G~~~W~~~~~~-~~~ 144 (370)
T COG1520 67 GDGTVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGK-IYVGSWDGKLYALDASTGTLVWSRNVGG-SPY 144 (370)
T ss_pred eCCeEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCe-EEEecccceEEEEECCCCcEEEEEecCC-CeE
Confidence 34455666788888888988888664332211 1122222222555 6777888889999998899988885444 111
Q ss_pred eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+..-..-.+ ..+...+.++.+...|..+++.+....
T Consensus 145 ~~~~~v~~~-~~v~~~s~~g~~~al~~~tG~~~W~~~ 180 (370)
T COG1520 145 YASPPVVGD-GTVYVGTDDGHLYALNADTGTLKWTYE 180 (370)
T ss_pred EecCcEEcC-cEEEEecCCCeEEEEEccCCcEEEEEe
Confidence 122222223 344444478999999999998877654
No 390
>PHA02713 hypothetical protein; Provisional
Probab=95.77 E-value=0.15 Score=36.90 Aligned_cols=108 Identities=12% Similarity=0.101 Sum_probs=58.5
Q ss_pred cCCcEEEEeCCCC-----------------------eEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecCCC
Q psy11518 22 ATSKLAASSGADE-----------------------TVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDG 76 (139)
Q Consensus 22 ~~~~~l~~~~~~~-----------------------~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 76 (139)
.++.+.+.|+.++ .+..||+.+.+ .+..+.........+.+ +++..+.|+.++
T Consensus 397 ~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~~--~~~IYv~GG~~~ 474 (557)
T PHA02713 397 LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVSH--KDDIYVVCDIKD 474 (557)
T ss_pred ECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCcccccCcEEEE--CCEEEEEeCCCC
Confidence 3788888887652 46678876652 12222111111112222 566667776542
Q ss_pred ------cEEEEEeCC-ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCC--eEEEEEcCCCcee
Q psy11518 77 ------SIAIFRVGS-WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRSA 133 (139)
Q Consensus 77 ------~i~~~d~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~ 133 (139)
.+..||..+ .+....-..+..........+ ++++.++||.++ .+..||..+.+..
T Consensus 475 ~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~e~yd~~~~~W~ 538 (557)
T PHA02713 475 EKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQDTFNVYTYEWN 538 (557)
T ss_pred CCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeehhhcCccccccc
Confidence 356788876 343322211222111222222 788899999888 7888998887654
No 391
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.72 E-value=0.072 Score=24.37 Aligned_cols=31 Identities=32% Similarity=0.598 Sum_probs=25.4
Q ss_pred CCeEEEEECCCC---CEEEEecCCCcEEEEEeCC
Q psy11518 55 GTITCLKFTPEG---SHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 55 ~~v~~~~~~~~~---~~l~~~~~d~~i~~~d~~~ 85 (139)
+.+.++.|+|++ .+|+-.-..+.+.++|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 357899999854 4888888889999999985
No 392
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=95.40 E-value=0.38 Score=30.51 Aligned_cols=70 Identities=10% Similarity=0.151 Sum_probs=48.0
Q ss_pred CCCCCEEEEecCCCcEEEEEeCCceEEEE-------EEe-----CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 63 TPEGSHLISCSDDGSIAIFRVGSWQLEKL-------FKK-----AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 63 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~-------~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
..++.++.+-..+|.+++||+.+.+.... +.. ......|..+.++.+|.-+++-+ +|..+.||..-+
T Consensus 19 ~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L~ 97 (219)
T PF07569_consen 19 ECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDLG 97 (219)
T ss_pred EeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEeccccc
Confidence 34678899999999999999988765321 110 02333488888888888766655 467888887655
Q ss_pred cee
Q psy11518 131 RSA 133 (139)
Q Consensus 131 ~~~ 133 (139)
..+
T Consensus 98 ~W~ 100 (219)
T PF07569_consen 98 CWI 100 (219)
T ss_pred eeE
Confidence 443
No 393
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=95.35 E-value=0.56 Score=32.49 Aligned_cols=71 Identities=15% Similarity=0.183 Sum_probs=45.9
Q ss_pred EEEEECCCCCEEEEe-cCCC----cEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcC-----------CCe
Q psy11518 58 TCLKFTPEGSHLISC-SDDG----SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-----------DKT 121 (139)
Q Consensus 58 ~~~~~~~~~~~l~~~-~~d~----~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------d~~ 121 (139)
...+++|+++++|-+ +..| .++++|+.+++.+...... .. ...+.|.++++.++.... ...
T Consensus 127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~-~~--~~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIEN-PK--FSSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEE-EE--SEEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCcccc-cc--cceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 467889999988744 3334 4999999999776543111 11 233999999887655542 233
Q ss_pred EEEEEcCCCc
Q psy11518 122 LRTWNLVKGR 131 (139)
Q Consensus 122 i~i~d~~~~~ 131 (139)
|..|.+.+..
T Consensus 204 v~~~~~gt~~ 213 (414)
T PF02897_consen 204 VYRHKLGTPQ 213 (414)
T ss_dssp EEEEETTS-G
T ss_pred EEEEECCCCh
Confidence 7777777654
No 394
>KOG2395|consensus
Probab=95.31 E-value=0.072 Score=37.78 Aligned_cols=66 Identities=17% Similarity=0.266 Sum_probs=49.7
Q ss_pred EEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 17 VRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 17 v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
..|+.- ...++++|+.+|.|++||--..+....+++-..+|..+..+.+|++++..+ +..+.+.++
T Consensus 433 Fsc~aTT~sG~IvvgS~~GdIRLYdri~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~tyLlLi~t 499 (644)
T KOG2395|consen 433 FSCFATTESGYIVVGSLKGDIRLYDRIGRRAKTALPGLGDAIKHVDVTADGKWILATC-KTYLLLIDT 499 (644)
T ss_pred cceeeecCCceEEEeecCCcEEeehhhhhhhhhcccccCCceeeEEeeccCcEEEEec-ccEEEEEEE
Confidence 445444 566899999999999999733344455788889999999999999876554 446777665
No 395
>KOG4441|consensus
Probab=95.24 E-value=0.81 Score=33.41 Aligned_cols=113 Identities=17% Similarity=0.147 Sum_probs=63.4
Q ss_pred EEEecCCcEEEEeCCCC------eEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecCCCc-----EEEEEeC
Q psy11518 18 RSVAATSKLAASSGADE------TVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGS-----IAIFRVG 84 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~~------~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-----i~~~d~~ 84 (139)
.....+|.+.++|+.++ ++..||+.+.+ .+..+..-........+ ++...+.|+.|+. +..||..
T Consensus 422 gv~~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~~--~~~iYvvGG~~~~~~~~~VE~ydp~ 499 (571)
T KOG4441|consen 422 GVAVLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAVL--NGKIYVVGGFDGTSALSSVERYDPE 499 (571)
T ss_pred EEEEECCEEEEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEEE--CCEEEEECCccCCCccceEEEEcCC
Confidence 33445888889888554 56788887652 22222211222222223 6677788887763 6778877
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCC-----eEEEEEcCCCceeE
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK-----TLRTWNLVKGRSAY 134 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~ 134 (139)
+.+....-........+.... -+++..++|+.|+ .|..||..+.+...
T Consensus 500 ~~~W~~v~~m~~~rs~~g~~~--~~~~ly~vGG~~~~~~l~~ve~ydp~~d~W~~ 552 (571)
T KOG4441|consen 500 TNQWTMVAPMTSPRSAVGVVV--LGGKLYAVGGFDGNNNLNTVECYDPETDTWTE 552 (571)
T ss_pred CCceeEcccCccccccccEEE--ECCEEEEEecccCccccceeEEcCCCCCceee
Confidence 665544321122221122222 2678888888765 47788877766543
No 396
>KOG3630|consensus
Probab=95.22 E-value=0.065 Score=41.29 Aligned_cols=88 Identities=10% Similarity=0.148 Sum_probs=54.2
Q ss_pred EEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEe-CC-CCcceeEEE
Q psy11518 28 ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK-AH-KGTAVNHIS 105 (139)
Q Consensus 28 ~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-~~-~~~~v~~~~ 105 (139)
++...|+.|++..+........--......++++|+|.|+.++.|-..|++..|-.. .+....+.. +. ....|.+++
T Consensus 172 av~l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~ 250 (1405)
T KOG3630|consen 172 AVDLSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVT 250 (1405)
T ss_pred hhhccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEE
Confidence 344455556555443222211111234567999999999999999999999988754 332222211 11 124589999
Q ss_pred EccCCcEEEEE
Q psy11518 106 IHPSGKLALSV 116 (139)
Q Consensus 106 ~~~~~~~l~~~ 116 (139)
|-....++++-
T Consensus 251 Wl~t~eflvvy 261 (1405)
T KOG3630|consen 251 WLSTQEFLVVY 261 (1405)
T ss_pred EecceeEEEEe
Confidence 99888877653
No 397
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=95.19 E-value=0.089 Score=22.12 Aligned_cols=25 Identities=16% Similarity=0.112 Sum_probs=21.6
Q ss_pred EEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 112 LALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 112 ~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.++.++.++.+..+|.++|+.+...
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 5777888999999999999988764
No 398
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=95.18 E-value=0.55 Score=31.11 Aligned_cols=92 Identities=15% Similarity=0.267 Sum_probs=55.4
Q ss_pred cEEEEeCCCC-eEEEEEccCCceeeEEEecCCC--eEEEEECCCCCEEEEecC-----CCcEEEEEeCCce-EEEEEEeC
Q psy11518 25 KLAASSGADE-TVVLYDMVKRKQSGALMQHEGT--ITCLKFTPEGSHLISCSD-----DGSIAIFRVGSWQ-LEKLFKKA 95 (139)
Q Consensus 25 ~~l~~~~~~~-~v~i~~~~~~~~~~~~~~~~~~--v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~~~-~~~~~~~~ 95 (139)
..++.+-.-| .-.++|....+...++...++. .-.-.|||+|.+|...-. -|.|-+||.+.+- .+..+ .
T Consensus 81 ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~--~ 158 (366)
T COG3490 81 RAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEF--S 158 (366)
T ss_pred ceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCcEEEeecCCCCCCCceEEEEecccccceeccc--c
Confidence 3344444333 4567787777665555432222 223478999999875422 3678999987432 23333 2
Q ss_pred CCCcceeEEEEccCCcEEEEEcC
Q psy11518 96 HKGTAVNHISIHPSGKLALSVGK 118 (139)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~~~ 118 (139)
..+--...+.|.+||+.++.+..
T Consensus 159 t~GiGpHev~lm~DGrtlvvanG 181 (366)
T COG3490 159 THGIGPHEVTLMADGRTLVVANG 181 (366)
T ss_pred cCCcCcceeEEecCCcEEEEeCC
Confidence 22222677899999999887753
No 399
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=95.13 E-value=0.13 Score=34.89 Aligned_cols=56 Identities=20% Similarity=0.302 Sum_probs=40.6
Q ss_pred CCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 75 DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 75 d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
.+.+.++|+.+++....... ...+....|+|+|+.++... ++.|.++++.+++..+
T Consensus 22 ~~~y~i~d~~~~~~~~l~~~---~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~ 77 (353)
T PF00930_consen 22 KGDYYIYDIETGEITPLTPP---PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQ 77 (353)
T ss_dssp EEEEEEEETTTTEEEESS-E---ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEE
T ss_pred ceeEEEEecCCCceEECcCC---ccccccceeecCCCeeEEEe-cCceEEEECCCCCeEE
Confidence 45688999998776655422 23378899999999988886 4689999988875443
No 400
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=95.01 E-value=0.79 Score=32.05 Aligned_cols=78 Identities=13% Similarity=0.132 Sum_probs=53.7
Q ss_pred eeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEEC----CCC----------------CEE-EEe
Q psy11518 14 TASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFT----PEG----------------SHL-ISC 72 (139)
Q Consensus 14 ~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~----~~~----------------~~l-~~~ 72 (139)
.....+++|++.+.++...-|.|.++|+.++..+...++.++. .+.|. +.. .+| +-.
T Consensus 309 ~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdA--qc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIya 386 (415)
T PF14655_consen 309 EGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDA--QCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYA 386 (415)
T ss_pred eEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccc--eEEEEEeecccccccccccccCCCCcceEEEEEEe
Confidence 3455677789999999888899999999998887777765543 22221 111 122 345
Q ss_pred cCCCcEEEEEeCCceEEEEEE
Q psy11518 73 SDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 73 ~~d~~i~~~d~~~~~~~~~~~ 93 (139)
-.-|.|.+|+++.+..+..+.
T Consensus 387 prRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 387 PRRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred ccCCeEEEEecCCCCEEEEEE
Confidence 667888889888887776663
No 401
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=95.01 E-value=0.65 Score=31.08 Aligned_cols=91 Identities=15% Similarity=0.154 Sum_probs=53.2
Q ss_pred EEEEEccCCceeeEEE----e-cCCCeEEEEECCCCCEEEEecC---------CCcEEEEEeC-CceEEEEEEeCCCCcc
Q psy11518 36 VVLYDMVKRKQSGALM----Q-HEGTITCLKFTPEGSHLISCSD---------DGSIAIFRVG-SWQLEKLFKKAHKGTA 100 (139)
Q Consensus 36 v~i~~~~~~~~~~~~~----~-~~~~v~~~~~~~~~~~l~~~~~---------d~~i~~~d~~-~~~~~~~~~~~~~~~~ 100 (139)
+.+++++++..+..+. + .....+.+...|+|.+.++... ...-.+|.+. .+...... ..+-..
T Consensus 87 ~~~~~~~~~~~~t~~~~~~~~~~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~-~~~~~~- 164 (307)
T COG3386 87 VRLLDPDTGGKITLLAEPEDGLPLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLL-DDDLTI- 164 (307)
T ss_pred cEEEeccCCceeEEeccccCCCCcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEee-cCcEEe-
Confidence 5556665554422221 1 1134467778889988775544 1123466555 44444444 222222
Q ss_pred eeEEEEccCCcEEEEEc-CCCeEEEEEcC
Q psy11518 101 VNHISIHPSGKLALSVG-KDKTLRTWNLV 128 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~-~d~~i~i~d~~ 128 (139)
.+.++|+||++.++.+. ..+.|+-|++.
T Consensus 165 ~NGla~SpDg~tly~aDT~~~~i~r~~~d 193 (307)
T COG3386 165 PNGLAFSPDGKTLYVADTPANRIHRYDLD 193 (307)
T ss_pred cCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence 57899999998776664 45888888775
No 402
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=95.01 E-value=0.65 Score=31.06 Aligned_cols=111 Identities=16% Similarity=0.172 Sum_probs=66.1
Q ss_pred eeEEEEecCCcEEEEeCCCCeEEEEEccC-CceeeEEEe--cCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC------
Q psy11518 15 ASVRSVAATSKLAASSGADETVVLYDMVK-RKQSGALMQ--HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS------ 85 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~------ 85 (139)
..+.++...++++++|..-..+.++.... ...+..+.. ....++++.+-++++.++.++.+|.+.++....
T Consensus 130 ~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~ 209 (321)
T PF03178_consen 130 FYITSLSVFKNYILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSR 209 (321)
T ss_dssp SSEEEEEEETTEEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTT
T ss_pred EEEEEEeccccEEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccc
Confidence 36777777677999998888888776544 232333322 334578888876667999999999999998753
Q ss_pred -ce-EEEEEEeCCCCcceeEE---EEccC--C------cEEEEEcCCCeEEEE
Q psy11518 86 -WQ-LEKLFKKAHKGTAVNHI---SIHPS--G------KLALSVGKDKTLRTW 125 (139)
Q Consensus 86 -~~-~~~~~~~~~~~~~v~~~---~~~~~--~------~~l~~~~~d~~i~i~ 125 (139)
+. .......-|.+..|+++ ++.|. + ..++.++.+|.|...
T Consensus 210 ~~~~~L~~~~~f~lg~~v~~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 210 DGDPKLERISSFHLGDIVNSFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp TTTTBEEEEEEEE-SS-EEEEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred cccccceeEEEEECCCccceEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 21 22222233444447776 55552 2 247788888888743
No 403
>PHA02713 hypothetical protein; Provisional
Probab=94.89 E-value=1 Score=32.76 Aligned_cols=108 Identities=9% Similarity=-0.009 Sum_probs=56.6
Q ss_pred cCCcEEEEeCCCC-----eEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecCCC------------------
Q psy11518 22 ATSKLAASSGADE-----TVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDG------------------ 76 (139)
Q Consensus 22 ~~~~~l~~~~~~~-----~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------------ 76 (139)
.++.+.+.|+.++ .+..||+.+.+ .+..+.........+.+ +++..+.|+.++
T Consensus 350 ~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g~IYviGG~~~~~~~~~~~~~~~~~~~~~ 427 (557)
T PHA02713 350 IDDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQYIYIIGGRTEHIDYTSVHHMNSIDMEED 427 (557)
T ss_pred ECCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CCEEEEEeCCCccccccccccccccccccc
Confidence 3788888888654 47789987642 11111111111122233 566677776542
Q ss_pred -----cEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC------CeEEEEEcCC-Ccee
Q psy11518 77 -----SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD------KTLRTWNLVK-GRSA 133 (139)
Q Consensus 77 -----~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~-~~~~ 133 (139)
.+..||..+.+....-....... -.+++ .-++++.+.||.+ ..+..||.++ .+..
T Consensus 428 ~~~~~~ve~YDP~td~W~~v~~m~~~r~-~~~~~-~~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~ 494 (557)
T PHA02713 428 THSSNKVIRYDTVNNIWETLPNFWTGTI-RPGVV-SHKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWE 494 (557)
T ss_pred ccccceEEEECCCCCeEeecCCCCcccc-cCcEE-EECCEEEEEeCCCCCCccceeEEEecCCCCCCee
Confidence 36678877655432221111111 11122 2357777888754 2467899887 5544
No 404
>KOG4460|consensus
Probab=94.88 E-value=0.4 Score=34.39 Aligned_cols=79 Identities=16% Similarity=0.266 Sum_probs=51.5
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEEe---------CCceEE---E------EEEeCCCCcceeEEEEccCC---cEEE
Q psy11518 56 TITCLKFTPEGSHLISCSDDGSIAIFRV---------GSWQLE---K------LFKKAHKGTAVNHISIHPSG---KLAL 114 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~---------~~~~~~---~------~~~~~~~~~~v~~~~~~~~~---~~l~ 114 (139)
.|..+..++.|..++-.+.+|.+.++=. ..++.. + .+......-.+...+|+|+. ..++
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~ 184 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLV 184 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEE
Confidence 4677888999999988888886554321 122111 1 11112222236678999966 5788
Q ss_pred EEcCCCeEEEEEcCCCceeE
Q psy11518 115 SVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 115 ~~~~d~~i~i~d~~~~~~~~ 134 (139)
.-..|..+++||+...+.++
T Consensus 185 iL~sdnviRiy~lS~~tely 204 (741)
T KOG4460|consen 185 LLTSDNVIRIYSLSEPTELY 204 (741)
T ss_pred EEecCcEEEEEecCCcchhh
Confidence 88889999999998766554
No 405
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=94.86 E-value=0.62 Score=30.16 Aligned_cols=116 Identities=11% Similarity=0.103 Sum_probs=71.8
Q ss_pred ecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEec-CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQH-EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 11 ~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
.+-...+..+.+ ++.++++....+.|..++. .++.+....-. .+..-.+++..++.++++.-.++.+.++++...
T Consensus 18 ~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~~~ 96 (248)
T PF06977_consen 18 PGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTIDDD 96 (248)
T ss_dssp TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE---
T ss_pred CCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEecc
Confidence 344444667776 4668888889999988886 57777665532 245688999888888777777899999988332
Q ss_pred e------EEEEEE--eC--CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 87 Q------LEKLFK--KA--HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 87 ~------~~~~~~--~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
. ....+. .. ++.+ +..++|+|.++.++.+-+..-..+|.+.
T Consensus 97 ~~~~~~~~~~~~~l~~~~~~N~G-~EGla~D~~~~~L~v~kE~~P~~l~~~~ 147 (248)
T PF06977_consen 97 TTSLDRADVQKISLGFPNKGNKG-FEGLAYDPKTNRLFVAKERKPKRLYEVN 147 (248)
T ss_dssp -TT--EEEEEEEE---S---SS---EEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred ccccchhhceEEecccccCCCcc-eEEEEEcCCCCEEEEEeCCCChhhEEEc
Confidence 1 112221 22 2333 8999999988877777776666666654
No 406
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=94.80 E-value=0.93 Score=31.84 Aligned_cols=114 Identities=11% Similarity=-0.009 Sum_probs=51.8
Q ss_pred eeEEEEEeecceeeEEEEec----CC-cEEEEeCCCCeEEEE-EccCC----ceeeEEEe-----------------cCC
Q psy11518 3 TLTQTFVTHSHTASVRSVAA----TS-KLAASSGADETVVLY-DMVKR----KQSGALMQ-----------------HEG 55 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~----~~-~~l~~~~~~~~v~i~-~~~~~----~~~~~~~~-----------------~~~ 55 (139)
+.+|++...........+.| +. .-++.+....+|..| ..+.+ +.+..+.. -..
T Consensus 233 ~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~ 312 (461)
T PF05694_consen 233 KLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPP 312 (461)
T ss_dssp EEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE--
T ss_pred cEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCC
Confidence 45666666555556777877 22 223333334444444 33433 12222211 034
Q ss_pred CeEEEEECCCCCEEE-EecCCCcEEEEEeCCceE---EEEEEeCC---------------CCcceeEEEEccCCcEEEEE
Q psy11518 56 TITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQL---EKLFKKAH---------------KGTAVNHISIHPSGKLALSV 116 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~---~~~~~~~~---------------~~~~v~~~~~~~~~~~l~~~ 116 (139)
-|+.+..|.|.++|. ++-..|.++.||+..... ........ .++ ..-+..|.||+.|...
T Consensus 313 LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~Gg-PqMvqlS~DGkRlYvT 391 (461)
T PF05694_consen 313 LITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGG-PQMVQLSLDGKRLYVT 391 (461)
T ss_dssp ----EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S-----EEE-TTSSEEEEE
T ss_pred ceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCC-CCeEEEccCCeEEEEE
Confidence 578999999999886 555699999999976432 22221111 111 4567788889877655
Q ss_pred c
Q psy11518 117 G 117 (139)
Q Consensus 117 ~ 117 (139)
+
T Consensus 392 n 392 (461)
T PF05694_consen 392 N 392 (461)
T ss_dssp -
T ss_pred e
Confidence 3
No 407
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=94.78 E-value=0.91 Score=31.68 Aligned_cols=56 Identities=14% Similarity=0.220 Sum_probs=41.2
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCc
Q psy11518 55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK 111 (139)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (139)
+++..++.||+++++|.-..+|.+.+....-.+....+....... +..+.|..+..
T Consensus 217 ~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~-p~~~~WCG~da 272 (410)
T PF04841_consen 217 GPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSP-PKQMAWCGNDA 272 (410)
T ss_pred CCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCC-CcEEEEECCCc
Confidence 579999999999999998899999888765555555554442333 66777776544
No 408
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=94.77 E-value=0.67 Score=30.04 Aligned_cols=108 Identities=12% Similarity=0.130 Sum_probs=62.1
Q ss_pred EEEEecCCcEEEEeC---CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE-eCCceEEE-E
Q psy11518 17 VRSVAATSKLAASSG---ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR-VGSWQLEK-L 91 (139)
Q Consensus 17 v~~~~~~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d-~~~~~~~~-~ 91 (139)
-..+++++..++... ....+.++.. +....... ....+..-+|++++..++....+....++. ..++.... .
T Consensus 28 s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~ 104 (253)
T PF10647_consen 28 SPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVE 104 (253)
T ss_pred ceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEE
Confidence 345556777665544 3345555543 32222221 223677889999988887777676667664 23333222 2
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEc---CCCeEEEEEc
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVG---KDKTLRTWNL 127 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~i~d~ 127 (139)
.........|..+.++|||..++... .++.|.+=-+
T Consensus 105 v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V 143 (253)
T PF10647_consen 105 VDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGV 143 (253)
T ss_pred ecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEE
Confidence 21222221599999999999776554 3566766544
No 409
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=94.75 E-value=0.68 Score=30.05 Aligned_cols=115 Identities=10% Similarity=0.110 Sum_probs=63.5
Q ss_pred eeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecC------------CCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHE------------GTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~------------~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
..+..+.|-++.++.|..++ ..+.|+.++.....+.... .++..+... ++.+|++. +....+.|
T Consensus 139 ~~~~~i~~~~~~i~v~~~~~-f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~~--~~~g~fv~ 214 (275)
T PF00780_consen 139 DPPSSIAFLGNKICVGTSKG-FYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLCY--DNIGVFVN 214 (275)
T ss_pred CCcEEEEEeCCEEEEEeCCc-eEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC-CceEEEEe--cceEEEEc
Confidence 55666777677888887555 6778888665543332111 123333332 34555543 33333334
Q ss_pred eCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
. .|+........-... +..+++ ...+++..+. +.|.||++.+++.++.+..
T Consensus 215 ~-~G~~~r~~~i~W~~~-p~~~~~--~~pyli~~~~-~~iEV~~~~~~~lvQ~i~~ 265 (275)
T PF00780_consen 215 K-NGEPSRKSTIQWSSA-PQSVAY--SSPYLIAFSS-NSIEVRSLETGELVQTIPL 265 (275)
T ss_pred C-CCCcCcccEEEcCCc-hhEEEE--ECCEEEEECC-CEEEEEECcCCcEEEEEEC
Confidence 3 333322111111222 555666 3567777666 4599999999999988765
No 410
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=94.70 E-value=0.16 Score=22.58 Aligned_cols=31 Identities=10% Similarity=0.145 Sum_probs=23.0
Q ss_pred cCCcEEEEEc-CCCeEEEEEcCCCceeEEEec
Q psy11518 108 PSGKLALSVG-KDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 108 ~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~ 138 (139)
|++++++++. .++.|.++|..+++.+..+.+
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 5667665544 688999999999888777653
No 411
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=94.69 E-value=1.4 Score=33.41 Aligned_cols=105 Identities=9% Similarity=0.070 Sum_probs=66.8
Q ss_pred CCeEEEEEccCCceeeEEEec---------CC--------Ce-EEEEECCCCCEEEEec------------------CCC
Q psy11518 33 DETVVLYDMVKRKQSGALMQH---------EG--------TI-TCLKFTPEGSHLISCS------------------DDG 76 (139)
Q Consensus 33 ~~~v~i~~~~~~~~~~~~~~~---------~~--------~v-~~~~~~~~~~~l~~~~------------------~d~ 76 (139)
+|.|+-+|.++++.+..+..- .+ .+ ...+++++...+..+. ..+
T Consensus 335 ~G~I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~ 414 (764)
T TIGR03074 335 SGVIRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSS 414 (764)
T ss_pred CcEEEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccc
Confidence 688999999999988776521 00 11 2234555444333221 124
Q ss_pred cEEEEEeCCceEEEEEEeCCCCc-------ceeEEEEcc-CCc---EEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 77 SIAIFRVGSWQLEKLFKKAHKGT-------AVNHISIHP-SGK---LALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 77 ~i~~~d~~~~~~~~~~~~~~~~~-------~v~~~~~~~-~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.|.-.|.++++..+.++..+++. +..-+.+.. +|+ .++.++.+|.+.++|-++|+.+...+
T Consensus 415 slvALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~~ 486 (764)
T TIGR03074 415 SLVALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPVE 486 (764)
T ss_pred eEEEEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeece
Confidence 56677889999999886644321 111122322 553 78889999999999999999987654
No 412
>KOG4441|consensus
Probab=94.68 E-value=0.95 Score=33.06 Aligned_cols=109 Identities=15% Similarity=0.172 Sum_probs=61.7
Q ss_pred CCcEEEEeCCC------CeEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecCCCc-----EEEEEeCCceEE
Q psy11518 23 TSKLAASSGAD------ETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGS-----IAIFRVGSWQLE 89 (139)
Q Consensus 23 ~~~~l~~~~~~------~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-----i~~~d~~~~~~~ 89 (139)
++...++|+.+ ..+..||+.+.+ .+..+...........+ +|...+.|+.||. +..||..+.+..
T Consensus 332 ~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~a~M~~~R~~~~v~~l--~g~iYavGG~dg~~~l~svE~YDp~~~~W~ 409 (571)
T KOG4441|consen 332 NGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPVAPMNTKRSDFGVAVL--DGKLYAVGGFDGEKSLNSVECYDPVTNKWT 409 (571)
T ss_pred CCEEEEEccccCCCcccceEEEecCCCCceeccCCccCccccceeEEE--CCEEEEEeccccccccccEEEecCCCCccc
Confidence 77888999988 356778876653 11112212222222222 6778889988875 677887665433
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCC------CeEEEEEcCCCceeEE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKD------KTLRTWNLVKGRSAYI 135 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~ 135 (139)
..-............ .-+|++.++||.+ ..+..||..+++....
T Consensus 410 ~va~m~~~r~~~gv~--~~~g~iYi~GG~~~~~~~l~sve~YDP~t~~W~~~ 459 (571)
T KOG4441|consen 410 PVAPMLTRRSGHGVA--VLGGKLYIIGGGDGSSNCLNSVECYDPETNTWTLI 459 (571)
T ss_pred ccCCCCcceeeeEEE--EECCEEEEEcCcCCCccccceEEEEcCCCCceeec
Confidence 222111111101112 2368888888844 4578889888766543
No 413
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=94.66 E-value=0.16 Score=22.39 Aligned_cols=27 Identities=11% Similarity=0.020 Sum_probs=22.7
Q ss_pred EEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 112 LALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 112 ~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.++.++.+|.+.-.|.++|+.+..++.
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 355668999999999999999988764
No 414
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=94.56 E-value=0.47 Score=34.21 Aligned_cols=70 Identities=11% Similarity=0.093 Sum_probs=42.1
Q ss_pred CCcEEEEeCCCCeEEEEEccC----CceeeEEE--e--------------------cCCCeEEEEECC----CCCEEEEe
Q psy11518 23 TSKLAASSGADETVVLYDMVK----RKQSGALM--Q--------------------HEGTITCLKFTP----EGSHLISC 72 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~----~~~~~~~~--~--------------------~~~~v~~~~~~~----~~~~l~~~ 72 (139)
+...++.+..||.+....... +....... . .......++.+. +..++++.
T Consensus 157 ~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~tl 236 (547)
T PF11715_consen 157 SEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFTL 236 (547)
T ss_dssp SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEEE
T ss_pred CCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEEE
Confidence 566677777778777766553 21111110 0 012345556665 67889999
Q ss_pred cCCCcEEEEEeCCceEEEEE
Q psy11518 73 SDDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 73 ~~d~~i~~~d~~~~~~~~~~ 92 (139)
+.|+.+++||+.+++.+...
T Consensus 237 ~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 237 SRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp ETTSEEEEEETTTTCEEEEE
T ss_pred eCCCeEEEEECCCCeEEEEe
Confidence 99999999999999986554
No 415
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=94.26 E-value=1.3 Score=31.18 Aligned_cols=99 Identities=15% Similarity=0.215 Sum_probs=51.3
Q ss_pred CCCeEEEEEccCCceeeEEEecC--CCeEEEEECC--CCCE-EEEecCCCcEEEE-EeCCceE--EEEEEeCCC------
Q psy11518 32 ADETVVLYDMVKRKQSGALMQHE--GTITCLKFTP--EGSH-LISCSDDGSIAIF-RVGSWQL--EKLFKKAHK------ 97 (139)
Q Consensus 32 ~~~~v~i~~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~-l~~~~~d~~i~~~-d~~~~~~--~~~~~~~~~------ 97 (139)
...++.+||..+.+.++++.--. .....+.|.. +..+ ++.+.-...|..| ....+.. ...+..+..
T Consensus 220 yG~~l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~ 299 (461)
T PF05694_consen 220 YGHSLHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWI 299 (461)
T ss_dssp S--EEEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS-
T ss_pred ccCeEEEEECCCCcEeeEEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCccc
Confidence 56799999999999999887432 2345677754 4444 3333334444443 3233332 222211110
Q ss_pred -----------CcceeEEEEccCCcEEEEEc-CCCeEEEEEcCCC
Q psy11518 98 -----------GTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKG 130 (139)
Q Consensus 98 -----------~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~ 130 (139)
..-|+.+..|.|.++|.... .+|.++-||+...
T Consensus 300 lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP 344 (461)
T PF05694_consen 300 LPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDP 344 (461)
T ss_dssp --GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SST
T ss_pred ccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCC
Confidence 12278999999999887776 5899999999764
No 416
>PHA03098 kelch-like protein; Provisional
Probab=94.22 E-value=1.5 Score=31.64 Aligned_cols=108 Identities=8% Similarity=0.040 Sum_probs=55.5
Q ss_pred cCCcEEEEeCCC------CeEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecCCC--------cEEEEEeCC
Q psy11518 22 ATSKLAASSGAD------ETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDG--------SIAIFRVGS 85 (139)
Q Consensus 22 ~~~~~l~~~~~~------~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~i~~~d~~~ 85 (139)
.++.+.+.|+.+ ..+..||+.+.+ .+..+.........+.. ++...+.|+.+. .+..||..+
T Consensus 388 ~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~v~~yd~~~ 465 (534)
T PHA03098 388 VNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGGCAIYH--DGKIYVIGGISYIDNIKVYNIVESYNPVT 465 (534)
T ss_pred ECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCceEEEE--CCEEEEECCccCCCCCcccceEEEecCCC
Confidence 367777777732 457888887642 11111111111122222 455666665432 277888876
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC-----CeEEEEEcCCCcee
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSA 133 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~ 133 (139)
.+....-...........+. .+++.++.||.+ ..+.+||..+.+..
T Consensus 466 ~~W~~~~~~~~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 516 (534)
T PHA03098 466 NKWTELSSLNFPRINASLCI--FNNKIYVVGGDKYEYYINEIEVYDDKTNTWT 516 (534)
T ss_pred CceeeCCCCCcccccceEEE--ECCEEEEEcCCcCCcccceeEEEeCCCCEEE
Confidence 65433221111111011222 267777888754 57899998877554
No 417
>KOG3630|consensus
Probab=94.13 E-value=0.28 Score=38.19 Aligned_cols=97 Identities=11% Similarity=-0.006 Sum_probs=60.8
Q ss_pred EeCCCCeEEEEEccCC--------ceee---EEEecCCCeEEEEECCCCC-EEEEecCCCcEEEEEeCCceEEEEEEeCC
Q psy11518 29 SSGADETVVLYDMVKR--------KQSG---ALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAH 96 (139)
Q Consensus 29 ~~~~~~~v~i~~~~~~--------~~~~---~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 96 (139)
....+..|..||+++- +++. +.........++.|+|.-. ..+....|+.|++..+......... .+.
T Consensus 119 ~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp~n~av~l~dlsl~V~~~~~~~~~v~s-~p~ 197 (1405)
T KOG3630|consen 119 STSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVPLNSAVDLSDLSLRVKSTKQLAQNVTS-FPV 197 (1405)
T ss_pred EecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCccchhhhhccccchhhhhhhhhhhhhcc-cCc
Confidence 3334558889998653 1111 1112233456788988533 4567778888888776543322111 122
Q ss_pred CCcceeEEEEccCCcEEEEEcCCCeEEEEEc
Q psy11518 97 KGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 97 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 127 (139)
....++++|+|.|+.++.|...|++.=|-.
T Consensus 198 -t~~~Tav~WSprGKQl~iG~nnGt~vQy~P 227 (1405)
T KOG3630|consen 198 -TNSQTAVLWSPRGKQLFIGRNNGTEVQYEP 227 (1405)
T ss_pred -ccceeeEEeccccceeeEecCCCeEEEeec
Confidence 223799999999999999999998876643
No 418
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=94.09 E-value=0.89 Score=28.70 Aligned_cols=104 Identities=13% Similarity=0.110 Sum_probs=62.1
Q ss_pred cEEEEeCCCCeEEEEEcc--CCceeeEEEecCCCeEEEEECCCCCEEEEecCCC------cEEEE---EeC--Cce----
Q psy11518 25 KLAASSGADETVVLYDMV--KRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG------SIAIF---RVG--SWQ---- 87 (139)
Q Consensus 25 ~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~~~---d~~--~~~---- 87 (139)
+.|..+...+.|.+|++. ..+.+.+|..- +.|..+.++..|++++|-=.+. .+++| +.. ...
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv-~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr~~~~~~~~v~v 107 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTV-GRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWRSQKEENSPVRV 107 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcch-hheeEEEeccccceEEEEEeecCCccceEEEEEEEhhhhcccCCcEEE
Confidence 455444666889999987 33556666644 7889999999999998764322 34543 221 001
Q ss_pred -----------------EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 88 -----------------LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 88 -----------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
....++.+-... +.+++..|..--|+.|+ ++.+.+|.+....
T Consensus 108 RiaG~~v~~~~~~~~~~qleiiElPl~~~-p~ciaCC~~tG~LlVg~-~~~l~lf~l~~~~ 166 (215)
T PF14761_consen 108 RIAGHRVTPSFNESSKDQLEIIELPLSEP-PLCIACCPVTGNLLVGC-GNKLVLFTLKYQT 166 (215)
T ss_pred EEcccccccCCCCccccceEEEEecCCCC-CCEEEecCCCCCEEEEc-CCEEEEEEEEEEE
Confidence 122222233323 67788888444444454 3578888776543
No 419
>KOG1916|consensus
Probab=94.00 E-value=0.1 Score=39.50 Aligned_cols=108 Identities=13% Similarity=0.237 Sum_probs=60.6
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEE-----------EECCCCCEEEEecCCCcEEEEEeCC-----c
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCL-----------KFTPEGSHLISCSDDGSIAIFRVGS-----W 86 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~-----------~~~~~~~~l~~~~~d~~i~~~d~~~-----~ 86 (139)
+.-++..+-.++++++........ ..+.+|...+..+ ..+|||+.++.++.||.++.|.+.- .
T Consensus 194 ~~~~ic~~~~~~~i~lL~~~ra~~-~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~ 272 (1283)
T KOG1916|consen 194 NKVYICYGLKGGEIRLLNINRALR-SLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQIYITGKIVH 272 (1283)
T ss_pred ccceeeeccCCCceeEeeechHHH-HHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeeeeeeccccH
Confidence 556777777888888776654321 2223344333322 3689999999999999999887632 2
Q ss_pred eEEEEEEeCCCCcc-eeEEEEccCC---------cEEEEEc-CCCeEEEEEcCCCcee
Q psy11518 87 QLEKLFKKAHKGTA-VNHISIHPSG---------KLALSVG-KDKTLRTWNLVKGRSA 133 (139)
Q Consensus 87 ~~~~~~~~~~~~~~-v~~~~~~~~~---------~~l~~~~-~d~~i~i~d~~~~~~~ 133 (139)
.++... .+|.+.+ +..+ ++.+. .++++++ ..+-+.+|.-..-+.+
T Consensus 273 rclhew-kphd~~p~vC~l-c~~~~~~~v~i~~w~~~Itttd~nre~k~w~~a~w~Cl 328 (1283)
T KOG1916|consen 273 RCLHEW-KPHDKHPRVCWL-CHKQEILVVSIGKWVLRITTTDVNREEKFWAEAPWQCL 328 (1283)
T ss_pred hhhhcc-CCCCCCCceeee-eccccccCCccceeEEEEecccCCcceeEeeccchhhh
Confidence 223333 3344332 3333 33221 2334444 3455888876554443
No 420
>PHA02790 Kelch-like protein; Provisional
Probab=93.11 E-value=2.3 Score=30.37 Aligned_cols=104 Identities=12% Similarity=-0.028 Sum_probs=54.9
Q ss_pred cCCcEEEEeCCCC---eEEEEEccCCce--eeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCC
Q psy11518 22 ATSKLAASSGADE---TVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH 96 (139)
Q Consensus 22 ~~~~~l~~~~~~~---~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 96 (139)
.++++.+.|+.++ .+..||+.+.+= ...+.........+.+ +++..+.|+ ....||..+.+....-....
T Consensus 361 ~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~~~~~~--~~~IYv~GG---~~e~ydp~~~~W~~~~~m~~ 435 (480)
T PHA02790 361 INNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKSCALVF--GRRLFLVGR---NAEFYCESSNTWTLIDDPIY 435 (480)
T ss_pred ECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccceEEEE--CCEEEEECC---ceEEecCCCCcEeEcCCCCC
Confidence 3788888887553 466788765421 1111111111122222 556666663 46788887665443221122
Q ss_pred CCcceeEEEEccCCcEEEEEcCC-----CeEEEEEcCCCce
Q psy11518 97 KGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRS 132 (139)
Q Consensus 97 ~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~ 132 (139)
... -.+++ --++++.+.||.+ ..+..||..+++.
T Consensus 436 ~r~-~~~~~-v~~~~IYviGG~~~~~~~~~ve~Yd~~~~~W 474 (480)
T PHA02790 436 PRD-NPELI-IVDNKLLLIGGFYRGSYIDTIEVYNNRTYSW 474 (480)
T ss_pred Ccc-ccEEE-EECCEEEEECCcCCCcccceEEEEECCCCeE
Confidence 111 11222 2367888888754 4688999887765
No 421
>KOG4499|consensus
Probab=93.06 E-value=1.6 Score=28.27 Aligned_cols=81 Identities=12% Similarity=0.147 Sum_probs=55.4
Q ss_pred EEEEECCCCCEE-EEecCCCcEEEEE--eCCceE-----EEEEEeC--CCCcceeEEEEccCCcEEEEEcCCCeEEEEEc
Q psy11518 58 TCLKFTPEGSHL-ISCSDDGSIAIFR--VGSWQL-----EKLFKKA--HKGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 58 ~~~~~~~~~~~l-~~~~~d~~i~~~d--~~~~~~-----~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 127 (139)
+.++|+.+.+.+ .+-+.+-.|.-|| +.++.. +..+... ......-.++...+|.+.++.-..++|..+|.
T Consensus 161 Ngl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp 240 (310)
T KOG4499|consen 161 NGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDP 240 (310)
T ss_pred ccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECC
Confidence 567888766655 4556677787787 555542 2233221 11112455777778998888888999999999
Q ss_pred CCCceeEEEec
Q psy11518 128 VKGRSAYITNL 138 (139)
Q Consensus 128 ~~~~~~~~~~~ 138 (139)
.+|+.+..+.+
T Consensus 241 ~tGK~L~eikl 251 (310)
T KOG4499|consen 241 TTGKILLEIKL 251 (310)
T ss_pred CCCcEEEEEEc
Confidence 99999988765
No 422
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=92.82 E-value=0.42 Score=21.12 Aligned_cols=31 Identities=13% Similarity=0.305 Sum_probs=22.7
Q ss_pred CCCCEEEE-ecCCCcEEEEEeCCceEEEEEEe
Q psy11518 64 PEGSHLIS-CSDDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 64 ~~~~~l~~-~~~d~~i~~~d~~~~~~~~~~~~ 94 (139)
|+++.+.+ .-.++.|.++|..++.....+..
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 45665554 44578899999988888877744
No 423
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=92.79 E-value=0.33 Score=19.79 Aligned_cols=25 Identities=4% Similarity=0.314 Sum_probs=19.2
Q ss_pred eeEEEEccCCcEEEEEcCCCeEEEE
Q psy11518 101 VNHISIHPSGKLALSVGKDKTLRTW 125 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d~~i~i~ 125 (139)
+..++.+++|+.+++-....+|.+|
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 5678888888888887777777664
No 424
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=92.32 E-value=1.4 Score=25.75 Aligned_cols=72 Identities=11% Similarity=0.187 Sum_probs=43.1
Q ss_pred EEECCCCCEEEEecCCCcEEEEEeCCc--------eEEEEEEeCCCCcceeEEE---Ecc--CCcEEEEEcCCCeEEEEE
Q psy11518 60 LKFTPEGSHLISCSDDGSIAIFRVGSW--------QLEKLFKKAHKGTAVNHIS---IHP--SGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 60 ~~~~~~~~~l~~~~~d~~i~~~d~~~~--------~~~~~~~~~~~~~~v~~~~---~~~--~~~~l~~~~~d~~i~i~d 126 (139)
-.|......|+.+..-|+|.+.+.... ..+..+..... |++++ |.| +...|+.|+. ..+..||
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LNin~~---italaaG~l~~~~~~D~LliGt~-t~llaYD 79 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLNINQE---ITALAAGRLKPDDGRDCLLIGTQ-TSLLAYD 79 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEECCCc---eEEEEEEecCCCCCcCEEEEecc-ceEEEEE
Confidence 356555567777778888888876533 23344422222 55554 433 2345666654 5788999
Q ss_pred cCCCceeEE
Q psy11518 127 LVKGRSAYI 135 (139)
Q Consensus 127 ~~~~~~~~~ 135 (139)
..+..-++.
T Consensus 80 V~~N~d~Fy 88 (136)
T PF14781_consen 80 VENNSDLFY 88 (136)
T ss_pred cccCchhhh
Confidence 987765543
No 425
>PHA03098 kelch-like protein; Provisional
Probab=92.20 E-value=3.3 Score=29.90 Aligned_cols=108 Identities=11% Similarity=0.095 Sum_probs=54.8
Q ss_pred cCCcEEEEeCCCC------eEEEEEccCCceee--EEEecCCCeEEEEECCCCCEEEEecCCC-----cEEEEEeCCceE
Q psy11518 22 ATSKLAASSGADE------TVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSDDG-----SIAIFRVGSWQL 88 (139)
Q Consensus 22 ~~~~~l~~~~~~~------~v~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~ 88 (139)
.++..++.|+.++ .+..||+.+.+-.. .+.........+.+ +++.++.|+.++ .+..||..+.+.
T Consensus 293 ~~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 370 (534)
T PHA03098 293 LNNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGESKW 370 (534)
T ss_pred ECCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCCce
Confidence 3677777777543 46678876653211 11111112222233 566777777652 366788766544
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCC------CeEEEEEcCCCcee
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKD------KTLRTWNLVKGRSA 133 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~ 133 (139)
...-..+.... -.+++ .-++++++.||.+ ..+..||+.+.+..
T Consensus 371 ~~~~~lp~~r~-~~~~~-~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~ 419 (534)
T PHA03098 371 REEPPLIFPRY-NPCVV-NVNNLIYVIGGISKNDELLKTVECFSLNTNKWS 419 (534)
T ss_pred eeCCCcCcCCc-cceEE-EECCEEEEECCcCCCCcccceEEEEeCCCCeee
Confidence 32211111111 11122 2367777777732 45888998876543
No 426
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=92.14 E-value=0.77 Score=32.96 Aligned_cols=61 Identities=20% Similarity=0.334 Sum_probs=47.2
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
...++++|+..|-|++||--..+....+++-...|-.+..+.+|.++++.+.. .+.+-|++
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~~ 632 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDVP 632 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEecc
Confidence 56789999999999999965555555667777889999999999987665543 67777763
No 427
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=92.00 E-value=3.1 Score=31.65 Aligned_cols=77 Identities=9% Similarity=0.147 Sum_probs=51.1
Q ss_pred CCeEEEEECC-CCCEEEEecCCCcEEEEEeCCce----EEEEEEeCCCC---------cceeEEEEccCCcEEEEEcCCC
Q psy11518 55 GTITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQ----LEKLFKKAHKG---------TAVNHISIHPSGKLALSVGKDK 120 (139)
Q Consensus 55 ~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~----~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~d~ 120 (139)
.+...++|+| +...+|..+..|...+|++.... ..........+ ..-..+.|.++...|++++. .
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r-~ 224 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNR-S 224 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcC-C
Confidence 3567899999 55689999999999999992111 11111011111 11347889888888887765 4
Q ss_pred eEEEEEcCCCce
Q psy11518 121 TLRTWNLVKGRS 132 (139)
Q Consensus 121 ~i~i~d~~~~~~ 132 (139)
.+.++|+++...
T Consensus 225 ~l~~~d~~~~~~ 236 (765)
T PF10214_consen 225 KLMLIDFESNWQ 236 (765)
T ss_pred ceEEEECCCCCc
Confidence 688899987755
No 428
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=91.91 E-value=1.5 Score=25.52 Aligned_cols=108 Identities=16% Similarity=0.116 Sum_probs=63.9
Q ss_pred CCcEEEEeCCCCeEEEEEccCCc--------eeeEEEecCCCeEEEE---ECC--CCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKRK--------QSGALMQHEGTITCLK---FTP--EGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~--------~~~~~~~~~~~v~~~~---~~~--~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
..+.|++++..+.|.|+++.... .+..+. -...|++++ |.| +...|+.|+.. .+..||+.+..-+
T Consensus 9 ~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN-in~~italaaG~l~~~~~~D~LliGt~t-~llaYDV~~N~d~ 86 (136)
T PF14781_consen 9 VHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN-INQEITALAAGRLKPDDGRDCLLIGTQT-SLLAYDVENNSDL 86 (136)
T ss_pred CceeEEEEecCCEEEEECCCccccccccccCceeEEE-CCCceEEEEEEecCCCCCcCEEEEeccc-eEEEEEcccCchh
Confidence 34468888889999999876432 233333 344567764 332 34566777654 6999999877654
Q ss_pred EEEEeCCCCcceeEEEEcc---CCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 90 KLFKKAHKGTAVNHISIHP---SGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
..- .-..+ +.++.+.. ...-++..+....|.-||..-.+....
T Consensus 87 Fyk--e~~DG-vn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWt 132 (136)
T PF14781_consen 87 FYK--EVPDG-VNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWT 132 (136)
T ss_pred hhh--hCccc-eeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEE
Confidence 332 22233 56665532 233445555567788888765555443
No 429
>KOG4499|consensus
Probab=91.75 E-value=2.4 Score=27.45 Aligned_cols=82 Identities=11% Similarity=0.052 Sum_probs=53.7
Q ss_pred EEEEeCCCCeEEEEE--ccCCc-----eeeEEEe---cC-CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEe
Q psy11518 26 LAASSGADETVVLYD--MVKRK-----QSGALMQ---HE-GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 26 ~l~~~~~~~~v~i~~--~~~~~-----~~~~~~~---~~-~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 94 (139)
+.++-+.+-+|.-|| ..++. .+..++. .+ ...-.++...+|++.++.-..++|...|..+++.+..+..
T Consensus 172 fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eikl 251 (310)
T KOG4499|consen 172 FYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKL 251 (310)
T ss_pred EEEEccCceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEc
Confidence 445666777887787 55542 2222321 01 1112344566788888887788899999999999998866
Q ss_pred CCCCcceeEEEEccC
Q psy11518 95 AHKGTAVNHISIHPS 109 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~ 109 (139)
+ . .++++.||...
T Consensus 252 P-t-~qitsccFgGk 264 (310)
T KOG4499|consen 252 P-T-PQITSCCFGGK 264 (310)
T ss_pred C-C-CceEEEEecCC
Confidence 6 3 33999999753
No 430
>KOG2377|consensus
Probab=91.74 E-value=3.3 Score=29.57 Aligned_cols=89 Identities=9% Similarity=0.002 Sum_probs=53.5
Q ss_pred CCcEEEEeCCCCeEEEEEccC---CceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEE--EeCCC
Q psy11518 23 TSKLAASSGADETVVLYDMVK---RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF--KKAHK 97 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~--~~~~~ 97 (139)
|.+..+.+...|.+.-|.++. .-++..-...+++|.++.|++|.+.+|.--.++.|.+++....+..... .....
T Consensus 32 DaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k 111 (657)
T KOG2377|consen 32 DANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTK 111 (657)
T ss_pred cCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccC
Confidence 333333333334444454432 2334444456779999999999999999999999999987443332222 11222
Q ss_pred CcceeEEEEccCCc
Q psy11518 98 GTAVNHISIHPSGK 111 (139)
Q Consensus 98 ~~~v~~~~~~~~~~ 111 (139)
...|...+|..+..
T Consensus 112 ~~~IlGF~W~~s~e 125 (657)
T KOG2377|consen 112 NANILGFCWTSSTE 125 (657)
T ss_pred cceeEEEEEecCee
Confidence 22377788876543
No 431
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=91.71 E-value=2.8 Score=28.15 Aligned_cols=65 Identities=20% Similarity=0.207 Sum_probs=44.5
Q ss_pred EecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEcc------CCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 71 SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP------SGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 71 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~------~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.+..-|.|-+||.. +..++.+.....-...+.|+..| .+.+|+---.||+|..||..+++.+..+
T Consensus 217 ~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG~~sg~lLVGNFGDG~InaFD~~sG~~~g~L 287 (336)
T TIGR03118 217 AGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFGSLSGALLVGNFGDGTINAYDPQSGAQLGQL 287 (336)
T ss_pred cCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhCCCCCCeEEeecCCceeEEecCCCCceeeee
Confidence 33445678899875 56666663444433467777765 5666766667999999999988866544
No 432
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=91.29 E-value=1.7 Score=27.50 Aligned_cols=48 Identities=13% Similarity=0.252 Sum_probs=32.8
Q ss_pred CEEEEecCCCcEEEEEeCCce--EEEEEEeCCCCcceeEEEEccCCcEEEEEc
Q psy11518 67 SHLISCSDDGSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVG 117 (139)
Q Consensus 67 ~~l~~~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 117 (139)
..|..+...+.|.+|++.+.. +...+ ..-+ +|..+.++..|.++++-=
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F--~Tv~-~V~~l~y~~~GDYlvTlE 78 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTF--STVG-RVLQLVYSEAGDYLVTLE 78 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEE--cchh-heeEEEeccccceEEEEE
Confidence 344444556679999998433 44444 3333 389999999999999864
No 433
>KOG1898|consensus
Probab=91.23 E-value=6.1 Score=31.13 Aligned_cols=93 Identities=11% Similarity=0.131 Sum_probs=60.4
Q ss_pred eeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEE---ecCCCeEEEEECCCC------CEEEEecCCCcEEEEEeC
Q psy11518 14 TASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALM---QHEGTITCLKFTPEG------SHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 14 ~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~---~~~~~v~~~~~~~~~------~~l~~~~~d~~i~~~d~~ 84 (139)
...+.+...+...++.+..++.+..+.......+..+. .-...+.|+++.++. ++++.++.|++++++.+.
T Consensus 539 ~~~Iv~~avnr~qiVvalSngelvyfe~d~sgql~E~~er~tl~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~ 618 (1205)
T KOG1898|consen 539 RVRIVKCAVNRRQIVVALSNGELVYFEGDVSGQLNEFTERVTLSTDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLD 618 (1205)
T ss_pred ceEEEEEeecceEEEEEccCCeEEEEEeccCccceeeeeeeeeceeehhhccCCCCcchhhcceeeeeccccceeEEEec
Confidence 34555555577777777788888777765444444443 234567888887643 578999999999999988
Q ss_pred CceEEEEEEeCCCCcceeEEEE
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISI 106 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~ 106 (139)
....+..+....-+.++.++++
T Consensus 619 p~d~l~~ls~q~l~~~~~s~~i 640 (1205)
T KOG1898|consen 619 PSDCLQPLSVQGLSSPPESLCI 640 (1205)
T ss_pred CcceEEEccccccCCCccceEE
Confidence 6666655544433333444443
No 434
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=90.97 E-value=1.5 Score=23.60 Aligned_cols=43 Identities=12% Similarity=0.148 Sum_probs=28.1
Q ss_pred EeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEe
Q psy11518 29 SSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC 72 (139)
Q Consensus 29 ~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 72 (139)
.+..+|.+.-||+.+++....+.+- ...+.+++++++..++.+
T Consensus 32 e~~~~GRll~ydp~t~~~~vl~~~L-~fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 32 EGRPTGRLLRYDPSTKETTVLLDGL-YFPNGVALSPDESFVLVA 74 (89)
T ss_dssp HT---EEEEEEETTTTEEEEEEEEE-SSEEEEEE-TTSSEEEEE
T ss_pred cCCCCcCEEEEECCCCeEEEehhCC-CccCeEEEcCCCCEEEEE
Confidence 3456788999999888765444443 345899999999976554
No 435
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=90.90 E-value=5.1 Score=31.01 Aligned_cols=88 Identities=13% Similarity=0.161 Sum_probs=52.4
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEE-ecCCC-----cEEEEEeCCce-EEEEEEeC
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLIS-CSDDG-----SIAIFRVGSWQ-LEKLFKKA 95 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~-----~i~~~d~~~~~-~~~~~~~~ 95 (139)
+.++.......+.|.+-|.....+...-..+...+.+-+|||+|+.++- .+.++ .|.+-|+.+.. .+-++ .
T Consensus 318 ~tkiAfv~~~~~~L~~~D~dG~n~~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~~~~vkl--~ 395 (912)
T TIGR02171 318 KAKLAFRNDVTGNLAYIDYTKGASRAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASGSGLVKL--P 395 (912)
T ss_pred eeeEEEEEcCCCeEEEEecCCCCceEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccCCCceEe--e
Confidence 4444444444458888887665554431346778888999999999986 44444 47777876533 22333 2
Q ss_pred CCCcceeEEEEccCCcE
Q psy11518 96 HKGTAVNHISIHPSGKL 112 (139)
Q Consensus 96 ~~~~~v~~~~~~~~~~~ 112 (139)
.+...|..-...++|..
T Consensus 396 ve~aaiprwrv~e~gdt 412 (912)
T TIGR02171 396 VENAAIPRWRVLENGDT 412 (912)
T ss_pred cccccccceEecCCCCe
Confidence 22233555555666653
No 436
>KOG1896|consensus
Probab=90.85 E-value=7.2 Score=31.23 Aligned_cols=112 Identities=11% Similarity=0.157 Sum_probs=62.6
Q ss_pred cceeeEEEEec-CCcEEEEeCCCCeEEEEEccCC-ceeeE-EEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce-
Q psy11518 12 SHTASVRSVAA-TSKLAASSGADETVVLYDMVKR-KQSGA-LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ- 87 (139)
Q Consensus 12 ~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~-~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~- 87 (139)
+..++|..++- +|.++.+ ....|.+|+++.. ..+.. |. .-++.-.+..-=.++++.|+--..|.+...+...
T Consensus 1095 E~KGtVsavceV~G~l~~~--~GqKI~v~~l~r~~~ligVaFi--D~~~yv~s~~~vknlIl~gDV~ksisfl~fqeep~ 1170 (1366)
T KOG1896|consen 1095 EQKGTVSAVCEVRGHLLSS--QGQKIIVRKLDRDSELIGVAFI--DLPLYVHSMKVVKNLILAGDVMKSISFLGFQEEPY 1170 (1366)
T ss_pred hcccceEEEEEeccEEEEc--cCcEEEEEEeccCCcceeeEEe--ccceeEEehhhhhhheehhhhhhceEEEEEccCce
Confidence 45567777665 6766553 3478999998433 32211 21 1122222222234566666665666666554322
Q ss_pred EEEEEEeCCCCcceeEEEEccCCc--EEEEEcCCCeEEEEEc
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGK--LALSVGKDKTLRTWNL 127 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~--~l~~~~~d~~i~i~d~ 127 (139)
....+......-.+.++.|--+|. .++++..++.|++|-.
T Consensus 1171 rlsL~srd~~~l~v~s~EFLVdg~~L~flvsDa~rNi~vy~Y 1212 (1366)
T KOG1896|consen 1171 RLSLLSRDFEPLNVYSTEFLVDGSNLSFLVSDADRNIHVYMY 1212 (1366)
T ss_pred EEEEeecCCchhhceeeeeEEcCCeeEEEEEcCCCcEEEEEe
Confidence 222332333333477888887776 5678888999988844
No 437
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=90.80 E-value=0.78 Score=20.03 Aligned_cols=28 Identities=21% Similarity=0.520 Sum_probs=17.6
Q ss_pred CCCeEEEEECCCCCEEE-EecCC--CcEEEE
Q psy11518 54 EGTITCLKFTPEGSHLI-SCSDD--GSIAIF 81 (139)
Q Consensus 54 ~~~v~~~~~~~~~~~l~-~~~~d--~~i~~~ 81 (139)
...-....|+|+|+.++ ++..+ |.-.||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 34557889999999886 44444 554444
No 438
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=90.79 E-value=5.8 Score=29.99 Aligned_cols=113 Identities=15% Similarity=0.281 Sum_probs=67.2
Q ss_pred eeeEEEEecCCcEEEEeCCCCeEEEEEccCCce------eeEEE----------------ecCCCeEEEEECC--CCCEE
Q psy11518 14 TASVRSVAATSKLAASSGADETVVLYDMVKRKQ------SGALM----------------QHEGTITCLKFTP--EGSHL 69 (139)
Q Consensus 14 ~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~------~~~~~----------------~~~~~v~~~~~~~--~~~~l 69 (139)
....+++.- .+++++|. .+.|.||++..... ...+. .....|+.+.... +...|
T Consensus 40 KNNLtalsq-~n~LFiA~-~s~I~Vy~~d~l~~~p~~~p~~~~~t~p~~~~~~D~~~s~~p~PHtIN~i~v~~lg~~EVL 117 (717)
T PF08728_consen 40 KNNLTALSQ-RNLLFIAY-QSEIYVYDPDGLTQLPSRKPCLRFDTKPEFTSTPDRLISTWPFPHTINFIKVGDLGGEEVL 117 (717)
T ss_pred ccceeEEec-CCEEEEEE-CCEEEEEecCCcccccccccccccccCccccccccccccCCCCCceeeEEEecccCCeeEE
Confidence 344444442 55666655 68899999854322 11110 0112355554433 45678
Q ss_pred EEecCCCcEEEEEeCC-------c----e-------EEEEEEeCCCCcceeEEEEc--cCCcEEEEEcCCCeEEEEEcCC
Q psy11518 70 ISCSDDGSIAIFRVGS-------W----Q-------LEKLFKKAHKGTAVNHISIH--PSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 70 ~~~~~d~~i~~~d~~~-------~----~-------~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
+.+..||.|.+|.+.. . . ....+ ....+.+.++++++ ...++|++++....|.||-...
T Consensus 118 l~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f-~~~v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFaf~l 196 (717)
T PF08728_consen 118 LLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFF-HLRVGASAWGLDIHDYKKSRLIAVSSNSQEVTVFAFAL 196 (717)
T ss_pred EEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCe-EeecCCceeEEEEEecCcceEEEEecCCceEEEEEEec
Confidence 8999999999997521 1 0 00112 12233348999999 7888899988888888886543
No 439
>PRK10115 protease 2; Provisional
Probab=90.62 E-value=5.9 Score=29.85 Aligned_cols=106 Identities=6% Similarity=0.032 Sum_probs=59.1
Q ss_pred EEecCCcEEEEeC-----CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC-C-----CcEEEEEeCCc-
Q psy11518 19 SVAATSKLAASSG-----ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD-D-----GSIAIFRVGSW- 86 (139)
Q Consensus 19 ~~~~~~~~l~~~~-----~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~~i~~~d~~~~- 86 (139)
.+++++++|+.+. +...|.+.|+.+++.+...-... . ..++|.++++.++.... + ..|..+++.++
T Consensus 133 ~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~~-~-~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h~lgt~~ 210 (686)
T PRK10115 133 AITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDNV-E-PSFVWANDSWTFYYVRKHPVTLLPYQVWRHTIGTPA 210 (686)
T ss_pred EECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccCc-c-eEEEEeeCCCEEEEEEecCCCCCCCEEEEEECCCCh
Confidence 3445888777543 33468888988876432221111 1 45899998886654432 2 35777788776
Q ss_pred -eEEEEEEeCCCCcceeEEEEccCCcEEEEEc---CCCeEEEEEc
Q psy11518 87 -QLEKLFKKAHKGTAVNHISIHPSGKLALSVG---KDKTLRTWNL 127 (139)
Q Consensus 87 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~i~d~ 127 (139)
+....+....... ......+.++++++..+ .++.+.+++.
T Consensus 211 ~~d~lv~~e~~~~~-~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~ 254 (686)
T PRK10115 211 SQDELVYEEKDDTF-YVSLHKTTSKHYVVIHLASATTSEVLLLDA 254 (686)
T ss_pred hHCeEEEeeCCCCE-EEEEEEcCCCCEEEEEEECCccccEEEEEC
Confidence 3333442222211 11333344777665443 3567888884
No 440
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=90.62 E-value=3.8 Score=27.68 Aligned_cols=69 Identities=10% Similarity=0.072 Sum_probs=49.9
Q ss_pred CCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcC--------------------CCeEEE
Q psy11518 65 EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK--------------------DKTLRT 124 (139)
Q Consensus 65 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------------d~~i~i 124 (139)
++++.+.-+..|.+.-+|.++++.......++. +..++|. |.+++++-+ ..-|.+
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~vpG~---~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~v 286 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAFLPGF---TRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAV 286 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEECCCC---Cccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEE
Confidence 577778888888899999887776665534432 6788887 777766521 133788
Q ss_pred EEcCCCceeEEEec
Q psy11518 125 WNLVKGRSAYITNL 138 (139)
Q Consensus 125 ~d~~~~~~~~~~~~ 138 (139)
.|+++|..+..+.+
T Consensus 287 idl~tG~vv~~l~f 300 (335)
T TIGR03032 287 IDLNSGDVVHWLRF 300 (335)
T ss_pred EECCCCCEEEEEEe
Confidence 89999998887765
No 441
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=90.51 E-value=3.9 Score=29.65 Aligned_cols=61 Identities=21% Similarity=0.279 Sum_probs=41.8
Q ss_pred CCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 65 EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 65 ~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
..-++|.++..|.|++||--.-..... .+.-+..|-.+..+.+|+++++.+. ..+.+-|++
T Consensus 572 esGyIa~as~kGDirLyDRig~rAKta--lP~lG~aIk~idvta~Gk~ilaTCk-~yllL~d~~ 632 (776)
T COG5167 572 ESGYIAAASRKGDIRLYDRIGKRAKTA--LPGLGDAIKHIDVTANGKHILATCK-NYLLLTDVP 632 (776)
T ss_pred cCceEEEecCCCceeeehhhcchhhhc--CcccccceeeeEeecCCcEEEEeec-ceEEEEecc
Confidence 456899999999999999533222222 2344455888999999998877664 355566654
No 442
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=90.49 E-value=6.3 Score=29.92 Aligned_cols=72 Identities=22% Similarity=0.317 Sum_probs=45.9
Q ss_pred eEEEEe--cCCcEEEEeCCCCeEEEEEccC---------Ccee---eEE--------EecCCCeEEEEECCC---CCEEE
Q psy11518 16 SVRSVA--ATSKLAASSGADETVVLYDMVK---------RKQS---GAL--------MQHEGTITCLKFTPE---GSHLI 70 (139)
Q Consensus 16 ~v~~~~--~~~~~l~~~~~~~~v~i~~~~~---------~~~~---~~~--------~~~~~~v~~~~~~~~---~~~l~ 70 (139)
.|..+. ++|.+++..|..|...+.=+.. ++.. .++ ......|..+.|+|. +..|+
T Consensus 86 ~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~ 165 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLV 165 (717)
T ss_pred eEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEE
Confidence 344444 4899998888766444433321 1111 111 123457889999995 57888
Q ss_pred EecCCCcEEEEEeCCce
Q psy11518 71 SCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 71 ~~~~d~~i~~~d~~~~~ 87 (139)
.-..|+.+++||+....
T Consensus 166 vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 166 VLTSDNTLRLYDISDPQ 182 (717)
T ss_pred EEecCCEEEEEecCCCC
Confidence 88899999999996543
No 443
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=90.37 E-value=2.4 Score=27.48 Aligned_cols=88 Identities=19% Similarity=0.257 Sum_probs=48.0
Q ss_pred EEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC-C--CcEEEEEeCC----ceEEE---EEEeCCCCcceeEEE
Q psy11518 36 VVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD-D--GSIAIFRVGS----WQLEK---LFKKAHKGTAVNHIS 105 (139)
Q Consensus 36 v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d--~~i~~~d~~~----~~~~~---~~~~~~~~~~v~~~~ 105 (139)
-.+||+.+++..-.--.....+..-++.++|+++.+|+. + ..+++++... ..... .+ ..... -....
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m--~~~RW-YpT~~ 124 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDM--QSGRW-YPTAT 124 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccc--cCCCc-cccce
Confidence 447888877543221122333344467889999988865 3 2477777543 11111 11 11111 23445
Q ss_pred EccCCcEEEEEcCCCe-EEEEE
Q psy11518 106 IHPSGKLALSVGKDKT-LRTWN 126 (139)
Q Consensus 106 ~~~~~~~l~~~~~d~~-i~i~d 126 (139)
--|||+.++.|+.... ..+|.
T Consensus 125 ~L~DG~vlIvGG~~~~t~E~~P 146 (243)
T PF07250_consen 125 TLPDGRVLIVGGSNNPTYEFWP 146 (243)
T ss_pred ECCCCCEEEEeCcCCCcccccC
Confidence 5679999999887632 34444
No 444
>PHA02790 Kelch-like protein; Provisional
Probab=90.28 E-value=5.2 Score=28.65 Aligned_cols=107 Identities=5% Similarity=-0.096 Sum_probs=55.0
Q ss_pred CCcEEEEeCCCC-----eEEEEEccCCce--eeEEEecCCCeEEEEECCCCCEEEEecCCC--cEEEEEeCCceEEEEEE
Q psy11518 23 TSKLAASSGADE-----TVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSDDG--SIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 23 ~~~~l~~~~~~~-----~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~ 93 (139)
++.++++|+.++ .+..||+.+.+- +..+.........+.. ++...+.|+.++ .+..||..++.....-.
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~~--~~~iYviGG~~~~~sve~ydp~~n~W~~~~~ 348 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPA--NNKLYVVGGLPNPTSVERWFHGDAAWVNMPS 348 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEEE--CCEEEEECCcCCCCceEEEECCCCeEEECCC
Confidence 566667777543 566788766531 1111111111222222 666777777543 47788876554332211
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCC---CeEEEEEcCCCcee
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKD---KTLRTWNLVKGRSA 133 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d---~~i~i~d~~~~~~~ 133 (139)
........... .-+++..+.||.+ ..+..||.++.+..
T Consensus 349 l~~~r~~~~~~--~~~g~IYviGG~~~~~~~ve~ydp~~~~W~ 389 (480)
T PHA02790 349 LLKPRCNPAVA--SINNVIYVIGGHSETDTTTEYLLPNHDQWQ 389 (480)
T ss_pred CCCCCcccEEE--EECCEEEEecCcCCCCccEEEEeCCCCEEE
Confidence 11111101112 2367888888754 34778888776544
No 445
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=90.05 E-value=3.4 Score=26.31 Aligned_cols=104 Identities=15% Similarity=0.183 Sum_probs=58.0
Q ss_pred CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcc---eeEEEEcc
Q psy11518 32 ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA---VNHISIHP 108 (139)
Q Consensus 32 ~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~---v~~~~~~~ 108 (139)
.++.-..+|..+-+.+..+...... ..+ ..++..|..++....+..-|..+............+.| +..+.|-
T Consensus 109 ~egvaf~~d~~t~~~lg~~~y~GeG-WgL--t~d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V- 184 (262)
T COG3823 109 KEGVAFKYDADTLEELGRFSYEGEG-WGL--TSDDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV- 184 (262)
T ss_pred ccceeEEEChHHhhhhcccccCCcc-eee--ecCCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-
Confidence 4555556666666655554432211 333 33556677777777777777665444443333333333 3344443
Q ss_pred CCcEEEEEcCCCeEEEEEcCCCceeEEEecC
Q psy11518 109 SGKLALSVGKDKTLRTWNLVKGRSAYITNLS 139 (139)
Q Consensus 109 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 139 (139)
+|..++-.=.+..|...+..+|+.+..+.+|
T Consensus 185 dG~lyANVw~t~~I~rI~p~sGrV~~widlS 215 (262)
T COG3823 185 DGELYANVWQTTRIARIDPDSGRVVAWIDLS 215 (262)
T ss_pred ccEEEEeeeeecceEEEcCCCCcEEEEEEcc
Confidence 5666665555666777777788777766653
No 446
>PRK10115 protease 2; Provisional
Probab=90.01 E-value=3.1 Score=31.24 Aligned_cols=71 Identities=8% Similarity=-0.029 Sum_probs=45.2
Q ss_pred CeEEEEECCCCCEEEEe-cCCC----cEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC------CeEEE
Q psy11518 56 TITCLKFTPEGSHLISC-SDDG----SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD------KTLRT 124 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~~~-~~d~----~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i 124 (139)
.+..+.++|++++++.+ +.+| .|.+.|+.++..+... .... -..++|.+|++.++....+ ..|..
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~---i~~~-~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~ 203 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPEL---LDNV-EPSFVWANDSWTFYYVRKHPVTLLPYQVWR 203 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCcc---ccCc-ceEEEEeeCCCEEEEEEecCCCCCCCEEEE
Confidence 35677899999988744 3333 4888888877533222 1111 1458999998866555332 36777
Q ss_pred EEcCCC
Q psy11518 125 WNLVKG 130 (139)
Q Consensus 125 ~d~~~~ 130 (139)
+++.++
T Consensus 204 h~lgt~ 209 (686)
T PRK10115 204 HTIGTP 209 (686)
T ss_pred EECCCC
Confidence 888877
No 447
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=89.71 E-value=1 Score=19.86 Aligned_cols=21 Identities=14% Similarity=0.088 Sum_probs=16.1
Q ss_pred CCcEEEEEcCCCeEEEEEcCC
Q psy11518 109 SGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 109 ~~~~l~~~~~d~~i~i~d~~~ 129 (139)
.+..++.++.||.++.+|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 356788899999999999864
No 448
>KOG1897|consensus
Probab=89.43 E-value=8.8 Score=30.08 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=69.7
Q ss_pred eeeEEEEe-cCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC--CceEEE
Q psy11518 14 TASVRSVA-ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG--SWQLEK 90 (139)
Q Consensus 14 ~~~v~~~~-~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~--~~~~~~ 90 (139)
.+.+.++. |+|+++|.- +.+|++|+..+.+.+..-..+...+..+...-.+..++.|+--+.+.+...+ .+....
T Consensus 829 ~Gav~aL~~fngkllA~I--n~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~e 906 (1096)
T KOG1897|consen 829 KGAVYALVEFNGKLLAGI--NQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKGDEGNFEE 906 (1096)
T ss_pred ccceeehhhhCCeEEEec--CcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEeccCCceEE
Confidence 34555555 488888744 5789999998887776666677788888888889999999887777665443 333444
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEc
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 127 (139)
....-+... .+.+.+- ++..++-+..+|.+.+-..
T Consensus 907 vArD~~p~W-mtaveil-~~d~ylgae~~gNlf~v~~ 941 (1096)
T KOG1897|consen 907 VARDYNPNW-MTAVEIL-DDDTYLGAENSGNLFTVRK 941 (1096)
T ss_pred eehhhCccc-eeeEEEe-cCceEEeecccccEEEEEe
Confidence 332222222 4555544 3444444555566555433
No 449
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=89.41 E-value=5.2 Score=27.42 Aligned_cols=110 Identities=10% Similarity=0.029 Sum_probs=65.6
Q ss_pred cEEEEeCCCCeEEEEEccCCceeeEEEecCC-CeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCC-CCccee
Q psy11518 25 KLAASSGADETVVLYDMVKRKQSGALMQHEG-TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH-KGTAVN 102 (139)
Q Consensus 25 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~v~ 102 (139)
..++.++.++.+..+|..+++.+........ .+..-....++ .+..++.++.+...|..++...+...... ....+.
T Consensus 112 G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~~~~-~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~ 190 (370)
T COG1520 112 GKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPPVVGDG-TVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIY 190 (370)
T ss_pred CeEEEecccceEEEEECCCCcEEEEEecCCCeEEecCcEEcCc-EEEEecCCCeEEEEEccCCcEEEEEecCCccccccc
Confidence 3477788888899999888988887775541 11111111133 33334478899999999999888864432 111111
Q ss_pred EEEEccCCcEEEEEcC--CCeEEEEEcCCCceeEEE
Q psy11518 103 HISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 103 ~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~ 136 (139)
.--. .....++.+.. ++.+.-.|.++|+.+...
T Consensus 191 ~~~~-~~~~~vy~~~~~~~~~~~a~~~~~G~~~w~~ 225 (370)
T COG1520 191 GSPA-IASGTVYVGSDGYDGILYALNAEDGTLKWSQ 225 (370)
T ss_pred cCce-eecceEEEecCCCcceEEEEEccCCcEeeee
Confidence 1111 22334444444 667888888888877664
No 450
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=89.39 E-value=1.1 Score=19.61 Aligned_cols=27 Identities=11% Similarity=-0.079 Sum_probs=22.5
Q ss_pred EEEEeCCCCeEEEEEccCCceeeEEEe
Q psy11518 26 LAASSGADETVVLYDMVKRKQSGALMQ 52 (139)
Q Consensus 26 ~l~~~~~~~~v~i~~~~~~~~~~~~~~ 52 (139)
.++.++.+|.|.-.|.++|+.+..++.
T Consensus 2 ~v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 2 RVYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 456669999999999999999887763
No 451
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=89.22 E-value=5.7 Score=27.63 Aligned_cols=90 Identities=8% Similarity=0.018 Sum_probs=42.7
Q ss_pred CCcEEE-EeCCCC--eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCc
Q psy11518 23 TSKLAA-SSGADE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGT 99 (139)
Q Consensus 23 ~~~~l~-~~~~~~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 99 (139)
+|+.|+ .+..++ .+.+.|+.+++..+.-.+-........++|+.+.++-......|.-.|+.+.+....+..+.. .
T Consensus 46 dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p~~-~ 124 (386)
T PF14583_consen 46 DGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVPDD-W 124 (386)
T ss_dssp TS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--TT-E
T ss_pred CCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECCcc-c
Confidence 675554 444455 555667777765443332212222445678777775544455788889998876666633322 2
Q ss_pred ceeEEEEc--cCCcEEE
Q psy11518 100 AVNHISIH--PSGKLAL 114 (139)
Q Consensus 100 ~v~~~~~~--~~~~~l~ 114 (139)
+-...|. .++..++
T Consensus 125 -~g~gt~v~n~d~t~~~ 140 (386)
T PF14583_consen 125 -KGYGTWVANSDCTKLV 140 (386)
T ss_dssp -EEEEEEEE-TTSSEEE
T ss_pred -ccccceeeCCCccEEE
Confidence 3334443 3555544
No 452
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=89.04 E-value=6.7 Score=28.15 Aligned_cols=109 Identities=17% Similarity=0.164 Sum_probs=58.5
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCC---CeEEEEECCCCCEEEEecC-------------CCcEEEEEeCCc
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEG---TITCLKFTPEGSHLISCSD-------------DGSIAIFRVGSW 86 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~-------------d~~i~~~d~~~~ 86 (139)
+|.+++... ..+..+|. .|+.+.....-.. .-..+...|+|++|+.+.. ...|..+| .++
T Consensus 158 nG~ll~~~~--~~~~e~D~-~G~v~~~~~l~~~~~~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG 233 (477)
T PF05935_consen 158 NGNLLIGSG--NRLYEIDL-LGKVIWEYDLPGGYYDFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTG 233 (477)
T ss_dssp TS-EEEEEB--TEEEEE-T-T--EEEEEE--TTEE-B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS
T ss_pred CCCEEEecC--CceEEEcC-CCCEEEeeecCCcccccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCC
Confidence 565555444 66777775 3554444332111 1245677889998887661 12366666 777
Q ss_pred eEEEEEEeCCC--------------------------CcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 87 QLEKLFKKAHK--------------------------GTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 87 ~~~~~~~~~~~--------------------------~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+..+.+..... -+ +.++.+.+ ++.+++++-.-..|...|.++++....+
T Consensus 234 ~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H-~Nsi~yd~~dd~iivSsR~~s~V~~Id~~t~~i~Wil 309 (477)
T PF05935_consen 234 EVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLH-INSIDYDPSDDSIIVSSRHQSAVIKIDYRTGKIKWIL 309 (477)
T ss_dssp -EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS---EEEEEEETTTTEEEEEETTT-EEEEEE-TTS-EEEEE
T ss_pred CEEEEEehHHhCCcccccccccccccccccCCCCCCccc-cCccEEeCCCCeEEEEcCcceEEEEEECCCCcEEEEe
Confidence 76665421110 11 78889988 7777788877778999998888887664
No 453
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=88.87 E-value=2.4 Score=22.83 Aligned_cols=49 Identities=10% Similarity=0.135 Sum_probs=30.5
Q ss_pred EecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEE-cCCCeE
Q psy11518 71 SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSV-GKDKTL 122 (139)
Q Consensus 71 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i 122 (139)
.+..+|.+.-||..+++..-.+..-.. .+.++.++|+.+++.+ ....+|
T Consensus 32 e~~~~GRll~ydp~t~~~~vl~~~L~f---pNGVals~d~~~vlv~Et~~~Ri 81 (89)
T PF03088_consen 32 EGRPTGRLLRYDPSTKETTVLLDGLYF---PNGVALSPDESFVLVAETGRYRI 81 (89)
T ss_dssp HT---EEEEEEETTTTEEEEEEEEESS---EEEEEE-TTSSEEEEEEGGGTEE
T ss_pred cCCCCcCEEEEECCCCeEEEehhCCCc---cCeEEEcCCCCEEEEEeccCceE
Confidence 345567888999988876555533332 6889999999976655 333443
No 454
>KOG2280|consensus
Probab=88.46 E-value=8 Score=29.36 Aligned_cols=50 Identities=12% Similarity=0.415 Sum_probs=35.5
Q ss_pred CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 34 ~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
..|+||+. +|+.+....-....+..+.|+.+. .|+....+|.+.+|++..
T Consensus 64 ~~I~If~~-sG~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 64 PYIRIFNI-SGQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLG 113 (829)
T ss_pred eeEEEEec-cccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecch
Confidence 34777775 566665544444577899999765 456677899999999863
No 455
>KOG2109|consensus
Probab=88.36 E-value=0.85 Score=33.59 Aligned_cols=86 Identities=16% Similarity=0.235 Sum_probs=57.4
Q ss_pred eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCc-EEEEEeCCceEE-----EEEEeCC----CCcceeEE
Q psy11518 35 TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS-IAIFRVGSWQLE-----KLFKKAH----KGTAVNHI 104 (139)
Q Consensus 35 ~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~~d~~~~~~~-----~~~~~~~----~~~~v~~~ 104 (139)
.+.+-|+.+...+..|+.|..++..++|.+.+..+++++-.|. |.++.+-..... ..+ ..+ ....+..+
T Consensus 296 ~vivkdf~S~a~i~QfkAhkspiSaLcfdqsgsllViasi~g~nVnvfRimet~~t~~~~~qs~-~~s~ra~t~aviqdi 374 (788)
T KOG2109|consen 296 LVIVKDFDSFADIRQFKAHKSPISALCFDQSGSLLVIASITGRNVNVFRIMETVCTVNVSDQSL-VVSPRANTAAVIQDI 374 (788)
T ss_pred eEEeecccchhhhhheeeecCcccccccccCceEEEEEeeccceeeeEEecccccccccccccc-ccchhcchHHHHHHH
Confidence 3556677777778889999999999999999999998877663 555554221111 111 111 11125667
Q ss_pred EEccCCcEEEEEcCCCe
Q psy11518 105 SIHPSGKLALSVGKDKT 121 (139)
Q Consensus 105 ~~~~~~~~l~~~~~d~~ 121 (139)
+|+....++..++.+|.
T Consensus 375 cfs~~s~~r~~gsc~Ge 391 (788)
T KOG2109|consen 375 CFSEVSTIRTAGSCEGE 391 (788)
T ss_pred hhhhhcceEeecccCCC
Confidence 88888888888876654
No 456
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=87.96 E-value=7.5 Score=27.45 Aligned_cols=107 Identities=8% Similarity=-0.007 Sum_probs=0.0
Q ss_pred CCcEEEEeCCCCeEEEEEccCCc----eeeEEEecCCCeEEEEECC----CCCEEEEecCCCcEEEEEe-----------
Q psy11518 23 TSKLAASSGADETVVLYDMVKRK----QSGALMQHEGTITCLKFTP----EGSHLISCSDDGSIAIFRV----------- 83 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~----~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~d~~i~~~d~----------- 83 (139)
+...+++|+..|.++||++.... .+..-..-..+|..+..-+ .....++.-.-..+.+|.+
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Q ss_pred -CCceEEEEEEeCCCCcceeEEEEccCC--cEEEEEcCCCeEEEEEcCC
Q psy11518 84 -GSWQLEKLFKKAHKGTAVNHISIHPSG--KLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 84 -~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~~~ 129 (139)
-.-.........+.........|.... .++.+-+.||.+.+|+-+.
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~ 164 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQES 164 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCc
No 457
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=87.95 E-value=1.2 Score=18.18 Aligned_cols=25 Identities=12% Similarity=0.259 Sum_probs=19.9
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEE
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYD 40 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~ 40 (139)
.+.+++....+++++...+.+++|.
T Consensus 3 ~i~aia~g~~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 3 EIEAIAAGDSWVAVATSAGYLRIFS 27 (27)
T ss_pred eEEEEEccCCEEEEEeCCCeEEecC
Confidence 4567777778999999999999873
No 458
>KOG1897|consensus
Probab=87.17 E-value=13 Score=29.27 Aligned_cols=109 Identities=12% Similarity=0.037 Sum_probs=65.0
Q ss_pred ecCCcEEEEeCCCCeEEEEEccCCceeeEE-EecCCCeEEEEECCC--C----CEEEEecCCCcEEEE-EeCCceEEEEE
Q psy11518 21 AATSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPE--G----SHLISCSDDGSIAIF-RVGSWQLEKLF 92 (139)
Q Consensus 21 ~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~--~----~~l~~~~~d~~i~~~-d~~~~~~~~~~ 92 (139)
..+...++.++.++.+-..++......... ......|.|+.++|- + +.++.|.++..+.+. -+.....+...
T Consensus 496 ~~n~sqVvvA~~~~~l~y~~i~~~~l~e~~~~~~e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~~~~ 575 (1096)
T KOG1897|consen 496 SANASQVVVAGGGLALFYLEIEDGGLREVSHKEFEYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILITHE 575 (1096)
T ss_pred eecceEEEEecCccEEEEEEeeccceeeeeeheecceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCcceeeee
Confidence 335666777777777766666655422211 123567899999973 2 267888877665433 33444433333
Q ss_pred EeCCCCc--ceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 93 KKAHKGT--AVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 93 ~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
......- .|.-.++-.|..+|.++..||.+.-|.+..
T Consensus 576 ~l~~~~iPRSIl~~~~e~d~~yLlvalgdG~l~~fv~d~ 614 (1096)
T KOG1897|consen 576 QLSGEIIPRSILLTTFEGDIHYLLVALGDGALLYFVLDI 614 (1096)
T ss_pred ccCCCccchheeeEEeeccceEEEEEcCCceEEEEEEEc
Confidence 2222221 244455666788999999999987775543
No 459
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=86.72 E-value=6.2 Score=25.19 Aligned_cols=106 Identities=11% Similarity=0.028 Sum_probs=58.2
Q ss_pred CCcEEEEeCC--CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCE-EEEecCCCcEEEEEeCCceEEEEEEeCCCCc
Q psy11518 23 TSKLAASSGA--DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSH-LISCSDDGSIAIFRVGSWQLEKLFKKAHKGT 99 (139)
Q Consensus 23 ~~~~l~~~~~--~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 99 (139)
++.++.+.+. ...|++||+.+++.+...+-....+..-....-+.+ .+-.-.+|....+|.++.+.+..+.....+
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~y~GeG- 133 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFSYEGEG- 133 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccccCCcc-
Confidence 5666666553 457999999988776554322111111111111222 233445777888888887777766444443
Q ss_pred ceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 100 AVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 100 ~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
+.++ .|++-++.+.....++.-|.++-...
T Consensus 134 --WgLt--~d~~~LimsdGsatL~frdP~tfa~~ 163 (262)
T COG3823 134 --WGLT--SDDKNLIMSDGSATLQFRDPKTFAEL 163 (262)
T ss_pred --eeee--cCCcceEeeCCceEEEecCHHHhhhc
Confidence 3343 24555665555556666666554443
No 460
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=86.07 E-value=7.9 Score=25.75 Aligned_cols=96 Identities=15% Similarity=0.158 Sum_probs=53.4
Q ss_pred CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec------CCCcEEEEEeCCceEEEEEEe--CCCCcceeE
Q psy11518 32 ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS------DDGSIAIFRVGSWQLEKLFKK--AHKGTAVNH 103 (139)
Q Consensus 32 ~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~i~~~d~~~~~~~~~~~~--~~~~~~v~~ 103 (139)
....|++||..+.+=...-.+-.+.|+.+.|..+.+.++.|. ....+..||..+......-.. ..-..++..
T Consensus 14 ~C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a 93 (281)
T PF12768_consen 14 PCPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTA 93 (281)
T ss_pred CCCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEE
Confidence 356799999766532221122346799999986667777664 344688899877654332210 112234776
Q ss_pred EEEcc-CCc-EEEEEc---CCCeEEEEEc
Q psy11518 104 ISIHP-SGK-LALSVG---KDKTLRTWNL 127 (139)
Q Consensus 104 ~~~~~-~~~-~l~~~~---~d~~i~i~d~ 127 (139)
+.+.. ++. +.+.|. .+..|..||=
T Consensus 94 ~~~~~~d~~~~~~aG~~~~g~~~l~~~dG 122 (281)
T PF12768_consen 94 LTFISNDGSNFWVAGRSANGSTFLMKYDG 122 (281)
T ss_pred EEeeccCCceEEEeceecCCCceEEEEcC
Confidence 66643 333 333333 2344666653
No 461
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=85.83 E-value=14 Score=28.37 Aligned_cols=104 Identities=10% Similarity=0.139 Sum_probs=63.9
Q ss_pred CCcEEEEeCCCCeEEEEEccCC----ceeeEEE-ecC----------CCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 23 TSKLAASSGADETVVLYDMVKR----KQSGALM-QHE----------GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~-~~~----------~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
+...||+....|...||++... .....+. .+. +.-..+.|.++.+.|+.++.. .+.++|+.+..
T Consensus 157 ~~~q~AiVD~~G~Wsvw~i~~~~~~~~~~~~~~~~~~gsi~~d~~e~s~w~rI~W~~~~~~lLv~~r~-~l~~~d~~~~~ 235 (765)
T PF10214_consen 157 DQRQFAIVDEKGNWSVWDIKGRPKRKSSNLRLSRNISGSIIFDPEELSNWKRILWVSDSNRLLVCNRS-KLMLIDFESNW 235 (765)
T ss_pred ccceEEEEeccCcEEEEEeccccccCCcceeeccCCCccccCCCcccCcceeeEecCCCCEEEEEcCC-ceEEEECCCCC
Confidence 6779999999999999999221 1111111 111 122367888888888888765 58899998776
Q ss_pred EEEEEEeCCCCcceeEEEEccC--CcEEEEEcCCCeEEEEEcCC
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~ 129 (139)
....+........|.++.-+|. ...++..+ ..|...++..
T Consensus 236 ~~~~l~~~~~~~~IlDv~~~~~~~~~~FiLTs--~eiiw~~~~~ 277 (765)
T PF10214_consen 236 QTEYLVTAKTWSWILDVKRSPDNPSHVFILTS--KEIIWLDVKS 277 (765)
T ss_pred ccchhccCCChhheeeEEecCCccceEEEEec--CeEEEEEccC
Confidence 5442323444444888888776 23333322 4566666665
No 462
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=85.76 E-value=11 Score=27.13 Aligned_cols=108 Identities=14% Similarity=0.101 Sum_probs=65.3
Q ss_pred CCcEEEEeCCCCeEEEE-EccCC-ce----eeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCC
Q psy11518 23 TSKLAASSGADETVVLY-DMVKR-KQ----SGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH 96 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~-~~~~~-~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 96 (139)
.|..+.++..||.|.-| |+..+ .+ +..++-...++..+.-..+.+.++.-..+|++..+.....+..-.- ...
T Consensus 279 Gg~SLLv~~~dG~vsQWFdvr~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~-~~~ 357 (733)
T COG4590 279 GGFSLLVVHEDGLVSQWFDVRRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFE-RAY 357 (733)
T ss_pred CceeEEEEcCCCceeeeeeeecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehh-hhh
Confidence 45568888899988866 44332 22 1222222334444333334566788888888888775544332221 111
Q ss_pred CCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 97 KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 97 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
. . +..++++|++.++++-. .|.++++.+++..+..
T Consensus 358 ~-~-~~~~~~Sp~~~~Ll~e~-~gki~~~~l~Nr~Pei 392 (733)
T COG4590 358 Q-A-PQLVAMSPNQAYLLSED-QGKIRLAQLENRNPEI 392 (733)
T ss_pred c-C-cceeeeCcccchheeec-CCceEEEEecCCCCCc
Confidence 2 2 66789999999887654 4679999988776543
No 463
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=85.60 E-value=11 Score=27.06 Aligned_cols=111 Identities=13% Similarity=0.112 Sum_probs=53.6
Q ss_pred CCcEEEEe---CCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCC-
Q psy11518 23 TSKLAASS---GADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG- 98 (139)
Q Consensus 23 ~~~~l~~~---~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~- 98 (139)
++-+++.. .......++|. .|..+..+.........+...++|.+++... ..+..+|.. |+....+..+...
T Consensus 114 ~gl~~~~~~~~~~~~~~~~iD~-~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~ 189 (477)
T PF05935_consen 114 DGLYFVNGNDWDSSSYTYLIDN-NGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYY 189 (477)
T ss_dssp T-EEEEEETT--BEEEEEEEET-TS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE
T ss_pred CcEEEEeCCCCCCCceEEEECC-CccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCccc
Confidence 33345555 23455556663 4555554443222211156678888887555 678888875 5555555333321
Q ss_pred cceeEEEEccCCcEEEEEcC-------------CCeEEEEEcCCCceeEEEec
Q psy11518 99 TAVNHISIHPSGKLALSVGK-------------DKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 99 ~~v~~~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~~~~~~~~ 138 (139)
.--..+..-|+|++|+.+.. .-.|..+| .+|+.+..+.+
T Consensus 190 ~~HHD~~~l~nGn~L~l~~~~~~~~~~~~~~~~~D~Ivevd-~tG~vv~~wd~ 241 (477)
T PF05935_consen 190 DFHHDIDELPNGNLLILASETKYVDEDKDVDTVEDVIVEVD-PTGEVVWEWDF 241 (477)
T ss_dssp -B-S-EEE-TTS-EEEEEEETTEE-TS-EE---S-EEEEE--TTS-EEEEEEG
T ss_pred ccccccEECCCCCEEEEEeecccccCCCCccEecCEEEEEC-CCCCEEEEEeh
Confidence 00234677899998887771 23477778 88888877654
No 464
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=85.54 E-value=8.8 Score=25.82 Aligned_cols=71 Identities=11% Similarity=0.214 Sum_probs=39.5
Q ss_pred cCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 53 HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 53 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
-.+.+..+.-++++++++++..-....-||-........- .. ...+|..|.|.|++.+.+.+ ..|.|+.=+
T Consensus 143 ~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G~~~w~~~~-r~-~~~riq~~gf~~~~~lw~~~-~Gg~~~~s~ 213 (302)
T PF14870_consen 143 TSGSINDITRSSDGRYVAVSSRGNFYSSWDPGQTTWQPHN-RN-SSRRIQSMGFSPDGNLWMLA-RGGQIQFSD 213 (302)
T ss_dssp ----EEEEEE-TTS-EEEEETTSSEEEEE-TT-SS-EEEE----SSS-EEEEEE-TTS-EEEEE-TTTEEEEEE
T ss_pred CcceeEeEEECCCCcEEEEECcccEEEEecCCCccceEEc-cC-ccceehhceecCCCCEEEEe-CCcEEEEcc
Confidence 3466788888999999998877666678875432222222 22 23349999999998866554 566666655
No 465
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=85.50 E-value=9.1 Score=25.91 Aligned_cols=72 Identities=17% Similarity=0.229 Sum_probs=48.4
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEeC------Cc-eEEEEEEeC---CCCcceeEEEEccCCcE------------EE
Q psy11518 57 ITCLKFTPEGSHLISCSDDGSIAIFRVG------SW-QLEKLFKKA---HKGTAVNHISIHPSGKL------------AL 114 (139)
Q Consensus 57 v~~~~~~~~~~~l~~~~~d~~i~~~d~~------~~-~~~~~~~~~---~~~~~v~~~~~~~~~~~------------l~ 114 (139)
-+.++++|.+.+.++....+...+||.. .. .+.-.+... .....++.+.|+....+ ++
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~Fi 104 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSRFL 104 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCcccceeEE
Confidence 3688999999999999889999999986 12 222222110 11223777888754433 56
Q ss_pred EEcCCCeEEEEEcC
Q psy11518 115 SVGKDKTLRTWNLV 128 (139)
Q Consensus 115 ~~~~d~~i~i~d~~ 128 (139)
.+++||+|.-|+..
T Consensus 105 f~tEdGTisaW~p~ 118 (336)
T TIGR03118 105 FVTEDGTLSGWAPA 118 (336)
T ss_pred EEeCCceEEeecCc
Confidence 67889999999853
No 466
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=84.87 E-value=6.1 Score=26.27 Aligned_cols=54 Identities=9% Similarity=0.148 Sum_probs=37.1
Q ss_pred cEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEc------CCCeEEEEEcCCCce
Q psy11518 77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG------KDKTLRTWNLVKGRS 132 (139)
Q Consensus 77 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~------~d~~i~i~d~~~~~~ 132 (139)
-|++||..+.+....- .. -.+.|..+.|..+.+.++.|. ....+..||+.+...
T Consensus 17 ~lC~yd~~~~qW~~~g-~~-i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w 76 (281)
T PF12768_consen 17 GLCLYDTDNSQWSSPG-NG-ISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTW 76 (281)
T ss_pred EEEEEECCCCEeecCC-CC-ceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCee
Confidence 4899998877665444 23 333499999986666776664 356788898876643
No 467
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=84.67 E-value=9.7 Score=25.57 Aligned_cols=117 Identities=8% Similarity=0.079 Sum_probs=74.2
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEec-CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQH-EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
....+.++.| +.+.|.+......-.++=...|+.+.+..-. -+....+.|..++++.++--+++.+.++.+......
T Consensus 84 ~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t~~ 163 (316)
T COG3204 84 ETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADTTV 163 (316)
T ss_pred ccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCccE
Confidence 3444666766 5556655555555555555677777665421 122357778878888888888888888887654211
Q ss_pred E-----EEE---eCC-CCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 90 K-----LFK---KAH-KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 90 ~-----~~~---~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
. .+. ..+ +.+ ...++|.|..+.+..+=+..-+.||....+
T Consensus 164 ~~~~~~~i~L~~~~k~N~G-fEGlA~d~~~~~l~~aKEr~P~~I~~~~~~ 212 (316)
T COG3204 164 ISAKVQKIPLGTTNKKNKG-FEGLAWDPVDHRLFVAKERNPIGIFEVTQS 212 (316)
T ss_pred EeccceEEeccccCCCCcC-ceeeecCCCCceEEEEEccCCcEEEEEecC
Confidence 1 111 111 233 788999999998888888777888766533
No 468
>KOG3616|consensus
Probab=84.66 E-value=3.5 Score=31.43 Aligned_cols=67 Identities=18% Similarity=0.394 Sum_probs=41.5
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEE
Q psy11518 54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125 (139)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 125 (139)
...+++++-+|.++.++.+..||.|.+|+.-......... ...|...+.|...| ++++..|+++.-|
T Consensus 14 ~e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~---~~~p~~nlv~tnhg--l~~~tsdrr~la~ 80 (1636)
T KOG3616|consen 14 DEFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICE---EAKPKENLVFTNHG--LVTATSDRRALAW 80 (1636)
T ss_pred cceeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhh---hcCCccceeeeccc--eEEEeccchhhee
Confidence 3456788888999999999999999999975443322221 11113345554333 4555555555555
No 469
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=84.12 E-value=11 Score=25.64 Aligned_cols=69 Identities=16% Similarity=0.117 Sum_probs=41.9
Q ss_pred CCeEEEEECC-------CCCEEEEecCCCcEEEEEeCCceEEE-EEE-eCCCCcceeEEEEccCCcEEEEEcCCCeEE
Q psy11518 55 GTITCLKFTP-------EGSHLISCSDDGSIAIFRVGSWQLEK-LFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLR 123 (139)
Q Consensus 55 ~~v~~~~~~~-------~~~~l~~~~~d~~i~~~d~~~~~~~~-~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 123 (139)
..+..+.|-. .+.++++.-..+.|....+....... ... ......++..+++.|||.++++...+|.|.
T Consensus 253 ~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 253 SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp --EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 4456666642 34566666667778888876443322 211 223343589999999999988888888763
No 470
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=83.63 E-value=11 Score=25.31 Aligned_cols=69 Identities=13% Similarity=0.163 Sum_probs=0.0
Q ss_pred eEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeE----EEEccCCcEEEEEcCCCeEEEEE
Q psy11518 57 ITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH----ISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 57 v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~----~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
++++...++|.+|++.-.-..|.+.|.++++.++.+.-+.... ..- .+|-.+-+++-.+..++.|.+||
T Consensus 146 iNsV~~~~~G~yLiS~R~~~~i~~I~~~tG~I~W~lgG~~~~d-f~~~~~~f~~QHdar~~~~~~~~~~IslFD 218 (299)
T PF14269_consen 146 INSVDKDDDGDYLISSRNTSTIYKIDPSTGKIIWRLGGKRNSD-FTLPATNFSWQHDARFLNESNDDGTISLFD 218 (299)
T ss_pred eeeeeecCCccEEEEecccCEEEEEECCCCcEEEEeCCCCCCc-ccccCCcEeeccCCEEeccCCCCCEEEEEc
No 471
>KOG2103|consensus
Probab=83.46 E-value=12 Score=28.76 Aligned_cols=75 Identities=15% Similarity=0.255 Sum_probs=50.0
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEc-CCCeEEEEEcCCCceeE
Q psy11518 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~ 134 (139)
.+..+.+.+...+++.....|.+.-.++++|+..+......+.. ...+-+. -+.+ +...++.||..+|....
T Consensus 37 k~~~~~~~t~~~rlivsT~~~vlAsL~~~tGei~WRqvl~~~~~-~~~~~~~------~~iS~dg~~lr~wn~~~g~l~~ 109 (910)
T KOG2103|consen 37 KVNFLVYDTKSKRLIVSTEKGVLASLNLRTGEIIWRQVLEPKTS-GLGVPLT------NTISVDGRYLRSWNTNNGILDW 109 (910)
T ss_pred eEEEEeecCCCceEEEEeccchhheecccCCcEEEEEeccCCCc-ccCccee------EEEccCCcEEEeecCCCceeee
Confidence 46777788888889999999999999999999887764433332 1122111 1233 33458899998886665
Q ss_pred EEe
Q psy11518 135 ITN 137 (139)
Q Consensus 135 ~~~ 137 (139)
.+.
T Consensus 110 ~i~ 112 (910)
T KOG2103|consen 110 EIE 112 (910)
T ss_pred ecc
Confidence 544
No 472
>KOG2247|consensus
Probab=83.44 E-value=0.064 Score=37.75 Aligned_cols=107 Identities=15% Similarity=0.142 Sum_probs=68.1
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCcEEEEEeCCceEEEEEEeCCCCcce
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV 101 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v 101 (139)
.+.-++.++.+..+..||- .++...... -......++|+.++..++ .+-..+.+.+||+.+.... .+....... -
T Consensus 45 e~~nlavaca~tiv~~YD~-agq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytq-qLE~gg~~s-~ 120 (615)
T KOG2247|consen 45 EGHNLAVACANTIVIYYDK-AGQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQ-QLESGGTSS-K 120 (615)
T ss_pred CCCceehhhhhhHHHhhhh-hcceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHH-HHhccCcch-H
Confidence 5555888888888888884 333333322 223445677877776654 5566788999998653322 221122211 2
Q ss_pred eEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 102 NHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 102 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
.-+.|++.+..++.+...+.+.|++..+.+.+
T Consensus 121 sll~wsKg~~el~ig~~~gn~viynhgtsR~i 152 (615)
T KOG2247|consen 121 SLLAWSKGTPELVIGNNAGNIVIYNHGTSRRI 152 (615)
T ss_pred HHHhhccCCccccccccccceEEEeccchhhh
Confidence 22778888888888888899999987765443
No 473
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=83.34 E-value=12 Score=25.71 Aligned_cols=62 Identities=13% Similarity=0.239 Sum_probs=36.4
Q ss_pred CCeEEEEECCCCCEEEEecCC-------------------CcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEE
Q psy11518 55 GTITCLKFTPEGSHLISCSDD-------------------GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALS 115 (139)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d-------------------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 115 (139)
.....+.|.|+|.+.++-+.. +.+.-++...+.. ..+... ... ...++|+++|+++++
T Consensus 124 ~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~-e~~a~G-~rn-p~Gl~~d~~G~l~~t 200 (367)
T TIGR02604 124 HSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKL-RVVAHG-FQN-PYGHSVDSWGDVFFC 200 (367)
T ss_pred ccccCceECCCCCEEEecccCCCceeccCCCccCcccccCceEEEEecCCCeE-EEEecC-cCC-CccceECCCCCEEEE
Confidence 346789999999876544411 2344444443332 333222 222 678999999998876
Q ss_pred EcCC
Q psy11518 116 VGKD 119 (139)
Q Consensus 116 ~~~d 119 (139)
-..+
T Consensus 201 dn~~ 204 (367)
T TIGR02604 201 DNDD 204 (367)
T ss_pred ccCC
Confidence 5543
No 474
>COG5276 Uncharacterized conserved protein [Function unknown]
Probab=82.78 E-value=12 Score=25.27 Aligned_cols=123 Identities=11% Similarity=0.018 Sum_probs=0.0
Q ss_pred eeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 14 TASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 14 ~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
+..+.++.+.++++..+..+.-+++.|+.+.........-.-.=..-.|.-.|+++..+..+.-+.+.|+.+........
T Consensus 86 ~~l~~Dv~vse~yvyvad~ssGL~IvDIS~P~sP~~~~~lnt~gyaygv~vsGn~aYVadlddgfLivdvsdpssP~lag 165 (370)
T COG5276 86 RDLFADVRVSEEYVYVADWSSGLRIVDISTPDSPTLIGFLNTDGYAYGVYVSGNYAYVADLDDGFLIVDVSDPSSPQLAG 165 (370)
T ss_pred hhhhheeEecccEEEEEcCCCceEEEeccCCCCcceeccccCCceEEEEEecCCEEEEeeccCcEEEEECCCCCCceeee
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
...... -..-...-.|++-..+..|+-+.+-|+.+.....-+.
T Consensus 166 rya~~~-~d~~~v~ISGn~AYvA~~d~GL~ivDVSnp~sPvli~ 208 (370)
T COG5276 166 RYALPG-GDTHDVAISGNYAYVAWRDGGLTIVDVSNPHSPVLIG 208 (370)
T ss_pred eeccCC-CCceeEEEecCeEEEEEeCCCeEEEEccCCCCCeEEE
No 475
>KOG2377|consensus
Probab=82.25 E-value=16 Score=26.33 Aligned_cols=115 Identities=17% Similarity=0.246 Sum_probs=68.0
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCcee----eEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS----GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
..++|.++.| |.+.+|+--.+.+|.+++....+.. .+.+.....|....|+.. +-+|.-...| +.+|-+...
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s-~e~A~i~~~G-~e~y~v~pe 142 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSS-TEIAFITDQG-IEFYQVLPE 142 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecC-eeEEEEecCC-eEEEEEchh
Confidence 3457888887 8999999999999999998544332 222334455788888766 3344444344 666665433
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEc--CCCeEEEEEcCCC
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVG--KDKTLRTWNLVKG 130 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~ 130 (139)
...-.+...+..+ |.-..|.++.+.++.++ ..+.+.-+-++++
T Consensus 143 krslRlVks~~~n-vnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~ 187 (657)
T KOG2377|consen 143 KRSLRLVKSHNLN-VNWYMYCPETAVILLSTTVLENVLNPFHFRAG 187 (657)
T ss_pred hhhhhhhhhcccC-ccEEEEccccceEeeeccccccccccEEEeec
Confidence 2222221233444 77788888887655444 3344444444443
No 476
>KOG2727|consensus
Probab=81.88 E-value=2.4 Score=32.78 Aligned_cols=80 Identities=15% Similarity=0.342 Sum_probs=51.8
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEE------Ec-cC-Cc----EEEEEcCCCeEEEE
Q psy11518 58 TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHIS------IH-PS-GK----LALSVGKDKTLRTW 125 (139)
Q Consensus 58 ~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~------~~-~~-~~----~l~~~~~d~~i~i~ 125 (139)
..++.+|+|++.|..+.=|.|.+.|+.....+..+ .+.+..++.-+. ++ +. .+ +.+-+...|.+.||
T Consensus 325 e~lslSP~gtlAAVTD~lgRVlLlDta~~ivvr~w-KGYRDAsc~fv~vkek~~~s~~~~sRvAlFLvIyAPRrgiLEVW 403 (1244)
T KOG2727|consen 325 EKLSLSPSGTLAAVTDSLGRVLLLDTAALIVVRLW-KGYRDASCVFVEVKEKKGKSEPVKSRVALFLVIYAPRRGILEVW 403 (1244)
T ss_pred ceeeeCCCccEEEEecccCcEEEEehhhhhHHHHh-cccccceeEEEEcccccCCCccCcCceeEEEEEecccccHHHHH
Confidence 46788999999998888889999998776555444 222322121111 01 11 11 12345567889999
Q ss_pred EcCCCceeEEEec
Q psy11518 126 NLVKGRSAYITNL 138 (139)
Q Consensus 126 d~~~~~~~~~~~~ 138 (139)
.+++|-.+..+++
T Consensus 404 ~~q~gpRV~AfnV 416 (1244)
T KOG2727|consen 404 QMQTGPRVLAFNV 416 (1244)
T ss_pred HhccCCeEEEEec
Confidence 9999988887765
No 477
>PF05787 DUF839: Bacterial protein of unknown function (DUF839); InterPro: IPR008557 This family consists of bacterial proteins of unknown function.
Probab=81.75 E-value=11 Score=27.54 Aligned_cols=23 Identities=13% Similarity=0.290 Sum_probs=17.2
Q ss_pred eCCCCcceeEEEEccCCcEEEEE
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSV 116 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~ 116 (139)
....+..++.++|+||++.|++.
T Consensus 497 ~~P~gaE~tG~~fspDg~tlFvn 519 (524)
T PF05787_consen 497 VGPNGAEITGPCFSPDGRTLFVN 519 (524)
T ss_pred cCCCCcccccceECCCCCEEEEE
Confidence 34455569999999999987654
No 478
>TIGR03054 photo_alph_chp1 putative photosynthetic complex assembly protein. In twenty or so anoxygenic photosynthetic alpha-Proteobacteria known so far, a gene for a member of this protein family is present and is found in the vicinity of puhA, which encodes a component of the photosynthetic reaction center, and other genes associated with photosynthesis. This protein family is suggested, consequently, as a probable assembly factor for the photosynthetic reaction center, but its seems its actual function has not yet been demonstrated.
Probab=80.27 E-value=9.5 Score=22.36 Aligned_cols=68 Identities=15% Similarity=0.194 Sum_probs=50.0
Q ss_pred EEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeE-----------EEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 68 HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH-----------ISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 68 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~-----------~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..+....||.+.+++..+++.+..+.....+- +.. .....+..+-++--+||.+.+-|..++..+...
T Consensus 43 l~f~d~~~G~v~V~~~~~G~~va~~~~g~~GF-vrgvlR~l~R~R~~~gv~~~~Pf~L~r~~dGrltL~Dp~Tg~~i~L~ 121 (135)
T TIGR03054 43 LVFEDRPDGAVAVVETPDGRLVAILEPGQNGF-VRVMLRGLARARARAGVAAEPPFRLTRYDNGRLTLTDPATGWSIELN 121 (135)
T ss_pred EEEecCCCCeEEEEECCCCCEEEEecCCCCch-hhHhHHHHHHHHHHcCCCCCCCEEEEEEeCCcEEEEcCCCCcEEEEe
Confidence 34566789999999999999998884443332 211 123457778889999999999999999887654
No 479
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=79.93 E-value=17 Score=25.05 Aligned_cols=100 Identities=14% Similarity=0.162 Sum_probs=51.2
Q ss_pred eEEEEec--CCcEEEEeC-----------CCC-eEEEEEccC--Cc--eeeEEEecCCCeEEEEECCCCCEEEEecCCCc
Q psy11518 16 SVRSVAA--TSKLAASSG-----------ADE-TVVLYDMVK--RK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGS 77 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~-----------~~~-~v~i~~~~~--~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 77 (139)
....+.+ +|+++++-. ..+ .|.+++-.+ ++ ....+...-.....+++.+++ .+++ .....
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G-lyV~-~~~~i 92 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG-VYVA-TPPDI 92 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC-EEEe-CCCeE
Confidence 3344555 677776643 223 777776543 22 223443333445788888888 4443 44432
Q ss_pred EEEEEeCCc-----eE--E-EEEEeCC--CCcceeEEEEccCCcEEEEEc
Q psy11518 78 IAIFRVGSW-----QL--E-KLFKKAH--KGTAVNHISIHPSGKLALSVG 117 (139)
Q Consensus 78 i~~~d~~~~-----~~--~-~~~~~~~--~~~~v~~~~~~~~~~~l~~~~ 117 (139)
.++.|.... +. + ..+.... .......++|.|||.+.++-+
T Consensus 93 ~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G 142 (367)
T TIGR02604 93 LFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHG 142 (367)
T ss_pred EEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecc
Confidence 333344221 11 1 1121110 122267899999998777655
No 480
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=79.09 E-value=12 Score=22.76 Aligned_cols=30 Identities=20% Similarity=0.189 Sum_probs=24.5
Q ss_pred ceeEEEEccCC------cEEEEEcCCCeEEEEEcCC
Q psy11518 100 AVNHISIHPSG------KLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 100 ~v~~~~~~~~~------~~l~~~~~d~~i~i~d~~~ 129 (139)
.+..++|+|.| -.|++.+.++.|.+|....
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 38999999944 3678889999999998763
No 481
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=79.07 E-value=24 Score=26.30 Aligned_cols=96 Identities=13% Similarity=0.118 Sum_probs=50.7
Q ss_pred eeEEEEec-CCcEEEEeC---CCCeEEEEEccCCceeeEEEecCCCeEEEEECCC----CCEEEEecCCCcEEEEEeCC-
Q psy11518 15 ASVRSVAA-TSKLAASSG---ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE----GSHLISCSDDGSIAIFRVGS- 85 (139)
Q Consensus 15 ~~v~~~~~-~~~~l~~~~---~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~~l~~~~~d~~i~~~d~~~- 85 (139)
.++..++| ||+.++-.. .+|.+++-|. +.+. .-..|..+.|.|- ...+++.-....|.+|.+..
T Consensus 20 HPvhGlaWTDGkqVvLT~L~l~~gE~kfGds---~viG----qFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s 92 (671)
T PF15390_consen 20 HPVHGLAWTDGKQVVLTDLQLHNGEPKFGDS---KVIG----QFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPS 92 (671)
T ss_pred ccccceEecCCCEEEEEeeeeeCCccccCCc---cEee----ccceeeeeeecCcccCCCCceEEEeccceEEEEEeccC
Confidence 35667888 887765332 3444443222 2222 3345789999984 32444555566899999852
Q ss_pred ----ceEEEEEEeCC-CCcc--eeEEEEccCCcEEEEEc
Q psy11518 86 ----WQLEKLFKKAH-KGTA--VNHISIHPSGKLALSVG 117 (139)
Q Consensus 86 ----~~~~~~~~~~~-~~~~--v~~~~~~~~~~~l~~~~ 117 (139)
++..-...... ..-+ ....-|||....|++-.
T Consensus 93 ~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT 131 (671)
T PF15390_consen 93 TTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLT 131 (671)
T ss_pred ccccccceeeeeeeccCCcccCCCcccccCCCceEEEEe
Confidence 22211110111 1111 34567888877665544
No 482
>TIGR03032 conserved hypothetical protein TIGR03032. This protein family is uncharacterized. A number of motifs are conserved perfectly among all member sequences. The function of this protein is unknown.
Probab=78.67 E-value=18 Score=24.66 Aligned_cols=85 Identities=14% Similarity=0.111 Sum_probs=55.6
Q ss_pred CCcEEEEeCCCCeEEEEEccCCce--eeEEEecCCCeEEEEECCCCCEEEEecC--------------------CCcEEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSD--------------------DGSIAI 80 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------------------d~~i~~ 80 (139)
++++.++-+..|.+.-+|.++++. +..+. +....++|. |++++++.. .+-|.+
T Consensus 212 dgrLwvldsgtGev~~vD~~~G~~e~Va~vp---G~~rGL~f~--G~llvVgmSk~R~~~~f~glpl~~~l~~~~CGv~v 286 (335)
T TIGR03032 212 QGKLWLLNSGRGELGYVDPQAGKFQPVAFLP---GFTRGLAFA--GDFAFVGLSKLRESRVFGGLPIEERLDALGCGVAV 286 (335)
T ss_pred CCeEEEEECCCCEEEEEcCCCCcEEEEEECC---CCCccccee--CCEEEEEeccccCCCCcCCCchhhhhhhhcccEEE
Confidence 677777777888888888776643 33333 334566665 556554421 123777
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccCCcE
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKL 112 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 112 (139)
.|++++.....+.....-..+.+++.-|+-+.
T Consensus 287 idl~tG~vv~~l~feg~v~EifdV~vLPg~r~ 318 (335)
T TIGR03032 287 IDLNSGDVVHWLRFEGVIEEIYDVAVLPGVRR 318 (335)
T ss_pred EECCCCCEEEEEEeCCceeEEEEEEEecCCCC
Confidence 88999988877766666556888888886543
No 483
>KOG1896|consensus
Probab=77.89 E-value=36 Score=27.73 Aligned_cols=116 Identities=16% Similarity=0.127 Sum_probs=60.7
Q ss_pred eeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEec-CCCeEEEEECCCCCEE-EEecCCCcEEEEEe--CC--ceE
Q psy11518 15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQH-EGTITCLKFTPEGSHL-ISCSDDGSIAIFRV--GS--WQL 88 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~--~~--~~~ 88 (139)
..+...+-.+.++++-...|.|.+|+++.......+..+ ...+.++...++-+-+ .+-+ +-..+--++ +. ...
T Consensus 627 ~~vv~~sv~dpyv~v~~~~g~i~~~~l~~~s~rl~~~~~~s~~~~sv~~~~dlsg~f~~~s-~l~~k~~~~~gr~~~~~~ 705 (1366)
T KOG1896|consen 627 AIVVQTSVADPYVAVRSSEGRITLYDLEEKSHRLALHDPMSFKVVSVSLPADLSGMFTTLS-DLSLKGNEANGRSSEAEG 705 (1366)
T ss_pred CcEEEEeccCceEEEEEcCCceEEEEeccccchhhccCcccceeEEEechhhhccceEEEe-eecccCcccccccccccc
Confidence 345555557788888888899999998766333333332 4556666655543322 2222 100110000 00 000
Q ss_pred EEEEE--eCCCCcceeEEEEccCC--cEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 89 EKLFK--KAHKGTAVNHISIHPSG--KLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 89 ~~~~~--~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
..... .....+ + .|+. .+++.+.++|.+.+|++.....+..++
T Consensus 706 ~~~~~~kv~~~eg---g---~~~~~~~~~~~~~e~g~leiy~~pd~~lVf~v~ 752 (1366)
T KOG1896|consen 706 LQSLPCKVDDEEG---G---SPEQEPYWCVFVTESGTLEIYALPDFDLVFEVD 752 (1366)
T ss_pred cccCCccccCCCC---C---CcccCceEEEEEcCCCceEEEccCCcceEEEee
Confidence 01110 000000 0 2222 678888899999999999888877654
No 484
>PRK13684 Ycf48-like protein; Provisional
Probab=77.82 E-value=19 Score=24.50 Aligned_cols=68 Identities=15% Similarity=0.205 Sum_probs=37.4
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeC--CCCcceeEEEEccCCcEEEEEcCCCeEE
Q psy11518 54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA--HKGTAVNHISIHPSGKLALSVGKDKTLR 123 (139)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 123 (139)
...+..+.+.++++.++.+. .|.+.+=..+.+..-.....+ .....+..+.+.+++..+++ +.+|.+.
T Consensus 214 ~~~l~~i~~~~~g~~~~vg~-~G~~~~~s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~-G~~G~v~ 283 (334)
T PRK13684 214 SRRLQSMGFQPDGNLWMLAR-GGQIRFNDPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAG-GGNGTLL 283 (334)
T ss_pred cccceeeeEcCCCCEEEEec-CCEEEEccCCCCCccccccCCccccccceeeEEEcCCCCEEEE-cCCCeEE
Confidence 35678889999888776654 565543223333321111111 11223778899987775554 4556443
No 485
>PF11635 Med16: Mediator complex subunit 16; InterPro: IPR021665 Mediator is a large complex of up to 33 proteins that is conserved from plants through fungi to humans - the number and representation of individual subunits varying with species [],[]. It is arranged into four different sections, a core, a head, a tail and a kinase-activity part, and the number of subunits within each of these is what varies with species. Overall, Mediator regulates the transcriptional activity of RNA polymerase II but it would appear that each of the four different sections has a slightly different function. Med16 is one of the subunits of the Tail portion of the Mediator complex and is required for lipopolysaccharide gene-expression []. Several members including the human protein, Q9Y2X0 from SWISSPROT, have one or more WD40 domains on them, PF00400 from PFAM.
Probab=77.76 E-value=29 Score=26.76 Aligned_cols=66 Identities=17% Similarity=0.165 Sum_probs=45.8
Q ss_pred eeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEE----E-----------e----cCCCeEEEEECCCCCEEEEe
Q psy11518 14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGAL----M-----------Q----HEGTITCLKFTPEGSHLISC 72 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~----~-----------~----~~~~v~~~~~~~~~~~l~~~ 72 (139)
...|.++.. -+..++.+-.||+|.++|..+.+.+... . + ....+..++|||.+..++.-
T Consensus 259 ~~~V~si~~~~~~~~v~~~~~DGsI~~~dr~t~~~~~~~~~~~~~~~~v~s~~~~Gf~fp~~~~~~~vafSPt~c~~v~~ 338 (753)
T PF11635_consen 259 NKRVVSITSPELDIVVAFAFSDGSIEFRDRNTMKELNETRTNGEPPNTVTSLFQAGFHFPCIQPPLHVAFSPTMCSLVQI 338 (753)
T ss_pred CCeEEEEEecccCcEEEEEEcCCeEEEEecCcchhhcccccccCCccccccccccccccccCCCCceEEECcccceEEEE
Confidence 345666665 5668899999999999998776444332 0 0 11123457799998888888
Q ss_pred cCCCcEE
Q psy11518 73 SDDGSIA 79 (139)
Q Consensus 73 ~~d~~i~ 79 (139)
..+|.+.
T Consensus 339 ~~~~~~~ 345 (753)
T PF11635_consen 339 DEDGKTK 345 (753)
T ss_pred ecCCCce
Confidence 8888765
No 486
>KOG2247|consensus
Probab=77.35 E-value=0.61 Score=33.17 Aligned_cols=97 Identities=14% Similarity=0.180 Sum_probs=61.5
Q ss_pred eeEEEEec--CCc-EEEEeCCCCeEEEEEccCCcee-eEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE
Q psy11518 15 ASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQS-GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 15 ~~v~~~~~--~~~-~l~~~~~~~~v~i~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 90 (139)
....+++| +++ .++.+-..+.+.+||+.+.... ..+.+ +..-.-+.|++.+..++.+...|.+.+++....+.+.
T Consensus 75 g~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~gg-~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~ii 153 (615)
T KOG2247|consen 75 GKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESGG-TSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRII 153 (615)
T ss_pred hhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhccC-cchHHHHhhccCCccccccccccceEEEeccchhhhh
Confidence 34455556 333 3445566788999998654221 11111 1222336789988889999899999999987766655
Q ss_pred EEEeCCCCcceeEEEEccCCcEEE
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLAL 114 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~ 114 (139)
... .|.. ++..++|.+.+..+.
T Consensus 154 v~G-kh~R-Rgtq~av~lEd~vil 175 (615)
T KOG2247|consen 154 VMG-KHQR-RGTQIAVTLEDYVIL 175 (615)
T ss_pred hhc-cccc-ceeEEEecccceeee
Confidence 552 1333 378899988765443
No 487
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=77.30 E-value=17 Score=23.64 Aligned_cols=97 Identities=13% Similarity=0.106 Sum_probs=53.0
Q ss_pred CCcEEEEeCCCCeEEEEE-ccCCcee-eEEEe--cCCCeEEEEECCCCCEEEEec---CCCcEEEEEeC---Cc---eEE
Q psy11518 23 TSKLAASSGADETVVLYD-MVKRKQS-GALMQ--HEGTITCLKFTPEGSHLISCS---DDGSIAIFRVG---SW---QLE 89 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~-~~~~~~~-~~~~~--~~~~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~---~~---~~~ 89 (139)
++...+....+...+++. ...+... ..... -...|..+.++|+|..++.-. .++.|.+=-+. .+ ...
T Consensus 76 ~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~ 155 (253)
T PF10647_consen 76 DGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLT 155 (253)
T ss_pred CCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceec
Confidence 555566555555555553 2232211 11221 112799999999999887554 34666665432 22 111
Q ss_pred EEEEeC-CCCcceeEEEEccCCcEEEEEcCC
Q psy11518 90 KLFKKA-HKGTAVNHISIHPSGKLALSVGKD 119 (139)
Q Consensus 90 ~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d 119 (139)
...... .....+..++|.+++.+++.+...
T Consensus 156 ~~~~~~~~~~~~v~~v~W~~~~~L~V~~~~~ 186 (253)
T PF10647_consen 156 GPRRVAPPLLSDVTDVAWSDDSTLVVLGRSA 186 (253)
T ss_pred cceEecccccCcceeeeecCCCEEEEEeCCC
Confidence 111111 112348899999999887777643
No 488
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=77.13 E-value=9.2 Score=20.46 Aligned_cols=51 Identities=16% Similarity=0.187 Sum_probs=32.0
Q ss_pred CCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEc-CCCeEEEEEcCC
Q psy11518 74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVK 129 (139)
Q Consensus 74 ~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~ 129 (139)
.-+.+..||..+. ... ...-.. ...+.++|++++|.+++ ..+.|++|..+.
T Consensus 34 ~~~~Vvyyd~~~~---~~v-a~g~~~-aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 34 PWGNVVYYDGKEV---KVV-ASGFSF-ANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred CCceEEEEeCCEe---EEe-eccCCC-CceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 3455666775432 111 111222 67899999999877665 578899998653
No 489
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=76.75 E-value=30 Score=26.20 Aligned_cols=122 Identities=14% Similarity=0.122 Sum_probs=62.3
Q ss_pred eeeEEEEec--CCcEEEEeCCCCeEEEEEccCCce--eeEEEe-cCCCeEEEEECC------CCCEEEEecC-C---CcE
Q psy11518 14 TASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ--SGALMQ-HEGTITCLKFTP------EGSHLISCSD-D---GSI 78 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~~-~~~~v~~~~~~~------~~~~l~~~~~-d---~~i 78 (139)
...+..+.+ +++.+++...+|.|.+||...+.. ...+.. +...+.--.|-+ ...++++-+. + -..
T Consensus 129 ~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~~~~l~~~~~l~~~~~~~v~ys~fv~~~~~~~~~~~ll~v~~~~~~k~~y 208 (670)
T PF10395_consen 129 DDKVVGIKFSSDGKIIYVVLENGSIQIYDFSENSLEKVPQLKLKSSINVSYSKFVNDFELENGKDLLLTVSQLSNSKLSY 208 (670)
T ss_pred ccceEEEEEecCCCEEEEEEcCCcEEEEeccccccccccccccccccceehhhhhcccccccCCceEEEEEEcCCCcEEE
Confidence 456777776 788999999999999999933211 111211 111111112222 2334443333 2 235
Q ss_pred EEEEe-CCceEEEEEE---eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 79 AIFRV-GSWQLEKLFK---KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 79 ~~~d~-~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+++.+ ........+. .......=..+++. +|.+.-- .+..|.+|++.+.+...++++
T Consensus 209 kL~~l~~~~~~~~El~s~~~e~~~~~~s~f~Y~-~G~LY~l--~~~~i~~ysip~f~~~~tI~l 269 (670)
T PF10395_consen 209 KLISLSNESSSIFELSSTILENFGLEDSKFCYQ-FGKLYQL--SKKTISSYSIPNFQIQKTISL 269 (670)
T ss_pred EEEEeccCCcceEEeehheeccCCcccceEEEe-CCEEEEE--eCCEEEEEEcCCceEEEEEEe
Confidence 66776 1112222221 11111112234443 4554333 677999999998888777764
No 490
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=75.80 E-value=19 Score=28.23 Aligned_cols=54 Identities=20% Similarity=0.221 Sum_probs=35.3
Q ss_pred CCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEE-EcCCC-----eEEEEEcCCC
Q psy11518 75 DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALS-VGKDK-----TLRTWNLVKG 130 (139)
Q Consensus 75 d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~-----~i~i~d~~~~ 130 (139)
.+.|.+-|......... +..... ++.+-+|+|||+.|+- .+.++ .|.+-|+++.
T Consensus 328 ~~~L~~~D~dG~n~~~v-e~~~~~-~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~ 387 (912)
T TIGR02171 328 TGNLAYIDYTKGASRAV-EIEDTI-SVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNAS 387 (912)
T ss_pred CCeEEEEecCCCCceEE-EecCCC-ceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhcc
Confidence 34777777766555443 123333 3888999999999887 44333 4777788754
No 491
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=75.68 E-value=21 Score=23.94 Aligned_cols=108 Identities=9% Similarity=0.080 Sum_probs=53.2
Q ss_pred cCCcEEEEeCCC-----CeEEEEEccCCce---eeEEEe---cCCCeEEEEECCCCCEEEEecC-----CCcEEEEEeCC
Q psy11518 22 ATSKLAASSGAD-----ETVVLYDMVKRKQ---SGALMQ---HEGTITCLKFTPEGSHLISCSD-----DGSIAIFRVGS 85 (139)
Q Consensus 22 ~~~~~l~~~~~~-----~~v~i~~~~~~~~---~~~~~~---~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~ 85 (139)
.++.+++.|+.+ ..+..||+.+.+- ...+.. .........+ +++..+.|+. ...+..||+.+
T Consensus 71 ~~~~lyviGG~~~~~~~~~v~~~d~~~~~w~~~~~~~~~lp~~~~~~~~~~~--~~~iYv~GG~~~~~~~~~v~~yd~~~ 148 (323)
T TIGR03548 71 VENGIYYIGGSNSSERFSSVYRITLDESKEELICETIGNLPFTFENGSACYK--DGTLYVGGGNRNGKPSNKSYLFNLET 148 (323)
T ss_pred ECCEEEEEcCCCCCCCceeEEEEEEcCCceeeeeeEcCCCCcCccCceEEEE--CCEEEEEeCcCCCccCceEEEEcCCC
Confidence 366777777754 3566677655442 111111 1111122222 4556666654 23477788776
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCC----eEEEEEcCCCce
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK----TLRTWNLVKGRS 132 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~ 132 (139)
.+....-..... .+....+...++++++.|+.++ .+.+||+++.+.
T Consensus 149 ~~W~~~~~~p~~-~r~~~~~~~~~~~iYv~GG~~~~~~~~~~~yd~~~~~W 198 (323)
T TIGR03548 149 QEWFELPDFPGE-PRVQPVCVKLQNELYVFGGGSNIAYTDGYKYSPKKNQW 198 (323)
T ss_pred CCeeECCCCCCC-CCCcceEEEECCEEEEEcCCCCccccceEEEecCCCee
Confidence 554322111111 1112222334677888887653 356888887654
No 492
>KOG3611|consensus
Probab=75.61 E-value=35 Score=26.31 Aligned_cols=78 Identities=9% Similarity=0.104 Sum_probs=48.6
Q ss_pred eeeEEEecCCCeEEEEEC----CCCC--EEEEecCCCcE-EEEEeCCce-----EEEEEEeCCCCcceeEEEEccCCcEE
Q psy11518 46 QSGALMQHEGTITCLKFT----PEGS--HLISCSDDGSI-AIFRVGSWQ-----LEKLFKKAHKGTAVNHISIHPSGKLA 113 (139)
Q Consensus 46 ~~~~~~~~~~~v~~~~~~----~~~~--~l~~~~~d~~i-~~~d~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l 113 (139)
++....+ ....+.++.+ .+++ .+..|..+|.| ++..+.... .+..+..-....+|..|..++....|
T Consensus 400 P~l~~~~-~~~~t~I~Vd~~~~~~~~ydVlflGTd~G~vlKvV~~~~~~~~~~~llEElqvf~~~~pI~~m~Ls~~~~~L 478 (737)
T KOG3611|consen 400 PLLVKTG-DYRLTQIVVDRVAGLDGNYDVLFLGTDAGTVLKVVSPGKESGKSNVLLEELQVFPDAEPIRSMQLSSKRGSL 478 (737)
T ss_pred ceEEecc-cceEEEEEEEEecCCCCcEEEEEEecCCCeEEEEEecCCccCccceeEEEEeecCCCCceeEEEecccCCeE
Confidence 4433333 4556666655 3444 46788888885 344443311 34444433344569999999988899
Q ss_pred EEEcCCCeEEE
Q psy11518 114 LSVGKDKTLRT 124 (139)
Q Consensus 114 ~~~~~d~~i~i 124 (139)
++|+.++.+++
T Consensus 479 yVgs~~gV~qv 489 (737)
T KOG3611|consen 479 YVGSRSGVVQV 489 (737)
T ss_pred EEEccCcEEEe
Confidence 99998886655
No 493
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=75.61 E-value=22 Score=23.95 Aligned_cols=110 Identities=11% Similarity=0.120 Sum_probs=68.6
Q ss_pred ecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE-EEEEEeCCCCc
Q psy11518 21 AATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL-EKLFKKAHKGT 99 (139)
Q Consensus 21 ~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~-~~~~~~~~~~~ 99 (139)
++||....++...+.|--.|..+++....--+....-..+..-|++...++-+.. -|.=+|-++.+. ...+...+...
T Consensus 70 apdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~-aI~R~dpkt~evt~f~lp~~~a~~ 148 (353)
T COG4257 70 APDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGSAWITDTGL-AIGRLDPKTLEVTRFPLPLEHADA 148 (353)
T ss_pred CCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCCeeEecCcc-eeEEecCcccceEEeecccccCCC
Confidence 3467677777777777777777776554433444555677888888877665544 344445544433 22333334444
Q ss_pred ceeEEEEccCCcEEEEEc---------CCCeEEEEEcCCCc
Q psy11518 100 AVNHISIHPSGKLALSVG---------KDKTLRTWNLVKGR 131 (139)
Q Consensus 100 ~v~~~~~~~~~~~l~~~~---------~d~~i~i~d~~~~~ 131 (139)
......|.+.|.+-+++. ..+.|.+|+.-.|.
T Consensus 149 nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaPqG~ 189 (353)
T COG4257 149 NLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAPQGG 189 (353)
T ss_pred cccceeeCCCccEEEeeccccceecCcccCceeeeccCCCC
Confidence 477788999998777764 24668888776553
No 494
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=75.22 E-value=28 Score=25.06 Aligned_cols=48 Identities=10% Similarity=0.046 Sum_probs=30.2
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCce--eeEEE-----ecCCCeEEEEECCCC
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRKQ--SGALM-----QHEGTITCLKFTPEG 66 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~-----~~~~~v~~~~~~~~~ 66 (139)
.+.+++.++++--..|.|++++..++.. +..+. ........++++|+.
T Consensus 36 aflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF 90 (454)
T TIGR03606 36 LWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDF 90 (454)
T ss_pred EEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCc
Confidence 3344887777666569999988655432 21111 124667899999875
No 495
>KOG1900|consensus
Probab=74.84 E-value=46 Score=27.35 Aligned_cols=94 Identities=18% Similarity=0.268 Sum_probs=53.4
Q ss_pred CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEE-CCC-------CCEEEEecCCCcEEEEEeC----Cce---E
Q psy11518 24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKF-TPE-------GSHLISCSDDGSIAIFRVG----SWQ---L 88 (139)
Q Consensus 24 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~-~~~-------~~~l~~~~~d~~i~~~d~~----~~~---~ 88 (139)
+...++ -|..+.+|+.+++.....+.+-...|..+.. -|. =++++.-..--.|.++-+. ++. .
T Consensus 91 ~RaWiT--iDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f 168 (1311)
T KOG1900|consen 91 GRAWIT--IDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIF 168 (1311)
T ss_pred cceEEE--eCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCccccc
Confidence 444443 4688999999998777777766666666653 232 2233333333345554431 111 1
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCC
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKD 119 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 119 (139)
...+.....+..|.++....+|+.+++|-.+
T Consensus 169 ~~~~~i~~dg~~V~~I~~t~nGRIF~~G~dg 199 (1311)
T KOG1900|consen 169 NTSFKISVDGVSVNCITYTENGRIFFAGRDG 199 (1311)
T ss_pred ccceeeecCCceEEEEEeccCCcEEEeecCC
Confidence 1122233334458899988888888776655
No 496
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=74.01 E-value=25 Score=23.93 Aligned_cols=101 Identities=15% Similarity=0.243 Sum_probs=50.6
Q ss_pred EEEEecCCcEEEEeCCCCeEEEEEccCCce---eeEE----EecCCCeEEEEECCC----CCEEEEecCC--------Cc
Q psy11518 17 VRSVAATSKLAASSGADETVVLYDMVKRKQ---SGAL----MQHEGTITCLKFTPE----GSHLISCSDD--------GS 77 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~---~~~~----~~~~~~v~~~~~~~~----~~~l~~~~~d--------~~ 77 (139)
-+.+.+++.++++- ..|.|.+++ ..+.. +..+ .........++++|+ +...+..+.. ..
T Consensus 6 ~~a~~pdG~l~v~e-~~G~i~~~~-~~g~~~~~v~~~~~v~~~~~~gllgia~~p~f~~n~~lYv~~t~~~~~~~~~~~~ 83 (331)
T PF07995_consen 6 SMAFLPDGRLLVAE-RSGRIWVVD-KDGSLKTPVADLPEVFADGERGLLGIAFHPDFASNGYLYVYYTNADEDGGDNDNR 83 (331)
T ss_dssp EEEEETTSCEEEEE-TTTEEEEEE-TTTEECEEEEE-TTTBTSTTBSEEEEEE-TTCCCC-EEEEEEEEE-TSSSSEEEE
T ss_pred EEEEeCCCcEEEEe-CCceEEEEe-CCCcCcceecccccccccccCCcccceeccccCCCCEEEEEEEcccCCCCCccee
Confidence 34555688777654 489999999 44433 2222 123456789999994 3333333211 12
Q ss_pred EEEEEeCCc-------eEE-EEEEe-CCCCcceeEEEEccCCcEEEEEcCC
Q psy11518 78 IAIFRVGSW-------QLE-KLFKK-AHKGTAVNHISIHPSGKLALSVGKD 119 (139)
Q Consensus 78 i~~~d~~~~-------~~~-~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d 119 (139)
|.-|..... +.+ ..... ....+.-..+.|.|+|.++++.++.
T Consensus 84 v~r~~~~~~~~~~~~~~~l~~~~p~~~~~~H~g~~l~fgpDG~LYvs~G~~ 134 (331)
T PF07995_consen 84 VVRFTLSDGDGDLSSEEVLVTGLPDTSSGNHNGGGLAFGPDGKLYVSVGDG 134 (331)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEEES-CSSSS-EEEEEE-TTSEEEEEEB-T
T ss_pred eEEEeccCCccccccceEEEEEeCCCCCCCCCCccccCCCCCcEEEEeCCC
Confidence 333443332 111 12211 1122225679999999877776643
No 497
>KOG4460|consensus
Probab=73.99 E-value=33 Score=25.36 Aligned_cols=66 Identities=18% Similarity=0.168 Sum_probs=41.4
Q ss_pred cCCcEEEEeCCCCeEEEEEc---------cCCceeeEEE----------e-cCCCeEEEEECCCC---CEEEEecCCCcE
Q psy11518 22 ATSKLAASSGADETVVLYDM---------VKRKQSGALM----------Q-HEGTITCLKFTPEG---SHLISCSDDGSI 78 (139)
Q Consensus 22 ~~~~~l~~~~~~~~v~i~~~---------~~~~~~~~~~----------~-~~~~v~~~~~~~~~---~~l~~~~~d~~i 78 (139)
..|..++-++.+|.+.++-+ +.+++..+.. . ..-.+...+|+|+. ..|..-..|..+
T Consensus 113 ~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss~~ltl~Qa~WHP~S~~D~hL~iL~sdnvi 192 (741)
T KOG4460|consen 113 PTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSSTSLTLKQAAWHPSSILDPHLVLLTSDNVI 192 (741)
T ss_pred CCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccCCceeeeeccccCCccCCceEEEEecCcEE
Confidence 47888888888886655442 2333322211 1 11134567899964 567777789999
Q ss_pred EEEEeCCce
Q psy11518 79 AIFRVGSWQ 87 (139)
Q Consensus 79 ~~~d~~~~~ 87 (139)
++||+....
T Consensus 193 Riy~lS~~t 201 (741)
T KOG4460|consen 193 RIYSLSEPT 201 (741)
T ss_pred EEEecCCcc
Confidence 999986544
No 498
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=73.99 E-value=25 Score=25.48 Aligned_cols=63 Identities=14% Similarity=0.036 Sum_probs=42.3
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
+.+-+++-..+|++.++.....+.+...... ..+..+++||++.++++-. .|.++++.+++..
T Consensus 327 ~rkgF~~l~~~G~L~~f~st~~~~lL~~~~~-~~~~~~~~Sp~~~~Ll~e~-~gki~~~~l~Nr~ 389 (733)
T COG4590 327 NRKGFYSLYRNGTLQSFYSTSEKLLLFERAY-QAPQLVAMSPNQAYLLSED-QGKIRLAQLENRN 389 (733)
T ss_pred ccceEEEEcCCCceeeeecccCcceehhhhh-cCcceeeeCcccchheeec-CCceEEEEecCCC
Confidence 4556777788888888875444444332222 2557789999998887764 4568888876643
No 499
>KOG1898|consensus
Probab=73.54 E-value=46 Score=26.79 Aligned_cols=110 Identities=12% Similarity=0.100 Sum_probs=60.0
Q ss_pred ceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEE--EecCCCeEEEEECCCCCEEEEecCCCcEEE--EEeCCceE
Q psy11518 13 HTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGAL--MQHEGTITCLKFTPEGSHLISCSDDGSIAI--FRVGSWQL 88 (139)
Q Consensus 13 ~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~--~d~~~~~~ 88 (139)
-.+++.++++-..++++|- ...+++||+...+.+... +--...|+.+++ .+..++.|.....+.+ |+-...+.
T Consensus 934 ~~~~v~Ai~~f~~~~Lagv-G~~l~~YdlG~K~lLRk~e~k~~p~~Is~iqt--~~~RI~VgD~qeSV~~~~y~~~~n~l 1010 (1205)
T KOG1898|consen 934 IPGPVGAICPFQGRVLAGV-GRFLRLYDLGKKKLLRKCELKFIPNRISSIQT--YGARIVVGDIQESVHFVRYRREDNQL 1010 (1205)
T ss_pred CCccceEEeccCCEEEEec-ccEEEEeeCChHHHHhhhhhccCceEEEEEee--cceEEEEeeccceEEEEEEecCCCeE
Confidence 3567888887444555444 478999999777655432 223455667666 4567777766555554 44444444
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEc
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 127 (139)
........... ++++.+- |...++.+..=|.+.+..+
T Consensus 1011 ~~fadD~~pR~-Vt~~~~l-D~~tvagaDrfGNi~~vR~ 1047 (1205)
T KOG1898|consen 1011 IVFADDPVPRH-VTALELL-DYDTVAGADRFGNIAVVRI 1047 (1205)
T ss_pred EEEeCCCccce-eeEEEEe-cCCceeeccccCcEEEEEC
Confidence 44432222222 4444332 4455555554455555433
No 500
>COG3211 PhoX Predicted phosphatase [General function prediction only]
Probab=72.77 E-value=20 Score=26.49 Aligned_cols=58 Identities=17% Similarity=0.253 Sum_probs=34.5
Q ss_pred EEEEECCCCCEEEEecCCC------cEEEE-----EeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEE
Q psy11518 58 TCLKFTPEGSHLISCSDDG------SIAIF-----RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSV 116 (139)
Q Consensus 58 ~~~~~~~~~~~l~~~~~d~------~i~~~-----d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 116 (139)
-.|.|.|.|++.+.-...+ ..-+| |...++....+ ..-.+..++..+|+||++.++++
T Consensus 503 Dnl~fD~~GrLWi~TDg~~s~~~~~~~G~~~m~~~~p~~g~~~rf~-t~P~g~E~tG~~FspD~~TlFV~ 571 (616)
T COG3211 503 DNLAFDPWGRLWIQTDGSGSTLRNRFRGVTQMLTPDPKTGTIKRFL-TGPIGCEFTGPCFSPDGKTLFVN 571 (616)
T ss_pred CceEECCCCCEEEEecCCCCccCcccccccccccCCCccceeeeec-cCCCcceeecceeCCCCceEEEE
Confidence 4577888888776543322 12233 22233344444 33344459999999999987765
Done!