Query psy11518
Match_columns 139
No_of_seqs 231 out of 1193
Neff 11.5
Searched_HMMs 29240
Date Fri Aug 16 20:27:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11518.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11518hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 6.5E-27 2.2E-31 151.0 19.0 129 1-133 2-132 (304)
2 3ow8_A WD repeat-containing pr 100.0 3.4E-26 1.2E-30 148.8 19.1 123 12-136 162-286 (321)
3 4gqb_B Methylosome protein 50; 100.0 3.7E-26 1.3E-30 150.0 18.4 131 7-137 120-254 (344)
4 1vyh_C Platelet-activating fac 100.0 1.6E-26 5.4E-31 154.7 16.5 125 10-136 104-230 (410)
5 4ery_A WD repeat-containing pr 99.9 1.8E-25 6.1E-30 144.4 20.1 128 7-136 16-145 (312)
6 1got_B GT-beta; complex (GTP-b 99.9 1.9E-25 6.6E-30 146.1 20.2 127 10-136 180-308 (340)
7 2ynn_A Coatomer subunit beta'; 99.9 2.5E-25 8.5E-30 143.6 19.7 123 12-135 53-178 (304)
8 1got_B GT-beta; complex (GTP-b 99.9 3.2E-25 1.1E-29 145.0 19.2 125 10-136 139-264 (340)
9 4gqb_B Methylosome protein 50; 99.9 3.2E-25 1.1E-29 145.5 18.5 121 14-136 82-208 (344)
10 3ow8_A WD repeat-containing pr 99.9 4.6E-25 1.6E-29 143.5 18.8 116 11-128 203-320 (321)
11 2xzm_R RACK1; ribosome, transl 99.9 5.4E-25 1.8E-29 144.1 18.9 120 8-129 15-149 (343)
12 2pbi_B Guanine nucleotide-bind 99.9 2E-24 6.9E-29 142.1 20.5 130 5-136 189-322 (354)
13 2pbi_B Guanine nucleotide-bind 99.9 1.7E-24 5.9E-29 142.4 19.5 123 12-136 152-278 (354)
14 4ery_A WD repeat-containing pr 99.9 4E-24 1.4E-28 138.0 20.6 124 11-136 62-187 (312)
15 3frx_A Guanine nucleotide-bind 99.9 2.1E-24 7.1E-29 140.2 19.3 120 9-130 12-139 (319)
16 3fm0_A Protein CIAO1; WDR39,SG 99.9 2E-24 6.8E-29 141.6 19.3 127 2-132 5-139 (345)
17 1vyh_C Platelet-activating fac 99.9 5.8E-25 2E-29 147.1 16.8 124 11-136 147-272 (410)
18 3frx_A Guanine nucleotide-bind 99.9 9.4E-24 3.2E-28 137.1 21.1 126 10-137 61-235 (319)
19 2hes_X YDR267CP; beta-propelle 99.9 3E-24 1E-28 140.0 18.7 117 12-130 56-185 (330)
20 4h5i_A Guanine nucleotide-exch 99.9 2.2E-24 7.7E-29 142.4 18.0 120 10-130 215-344 (365)
21 1nr0_A Actin interacting prote 99.9 1.5E-24 5.2E-29 151.3 17.9 126 11-137 144-278 (611)
22 2aq5_A Coronin-1A; WD40 repeat 99.9 5.5E-24 1.9E-28 141.7 18.0 125 11-136 78-214 (402)
23 4g56_B MGC81050 protein; prote 99.9 1E-24 3.4E-29 143.7 14.0 119 11-132 223-346 (357)
24 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.4E-23 4.6E-28 137.6 18.9 121 11-133 58-185 (345)
25 1nr0_A Actin interacting prote 99.9 1.3E-23 4.5E-28 146.6 19.2 124 10-134 186-360 (611)
26 2pm7_B Protein transport prote 99.9 4.1E-24 1.4E-28 137.5 15.4 120 10-131 5-134 (297)
27 3f3f_A Nucleoporin SEH1; struc 99.9 8E-24 2.7E-28 137.2 16.8 122 11-134 8-148 (351)
28 2ymu_A WD-40 repeat protein; u 99.9 1.4E-23 4.9E-28 144.8 18.9 119 9-131 11-131 (577)
29 3iz6_a 40S ribosomal protein R 99.9 9.8E-24 3.3E-28 139.9 17.3 126 11-136 202-336 (380)
30 2w18_A PALB2, fancn, partner a 99.9 1E-23 3.6E-28 137.0 16.8 123 5-128 171-356 (356)
31 3iz6_a 40S ribosomal protein R 99.9 5.7E-24 1.9E-28 141.0 15.4 121 11-132 246-378 (380)
32 3bg1_A Protein SEC13 homolog; 99.9 4.6E-24 1.6E-28 138.4 14.1 120 10-131 9-138 (316)
33 3mmy_A MRNA export factor; mRN 99.9 2.7E-23 9.4E-28 135.9 17.7 125 10-137 35-168 (368)
34 1erj_A Transcriptional repress 99.9 4.3E-23 1.5E-27 137.3 18.8 118 16-136 125-245 (393)
35 2hes_X YDR267CP; beta-propelle 99.9 3.8E-23 1.3E-27 134.8 17.7 119 10-130 103-231 (330)
36 1erj_A Transcriptional repress 99.9 6.5E-23 2.2E-27 136.5 19.2 123 12-137 62-204 (393)
37 4g56_B MGC81050 protein; prote 99.9 3.9E-24 1.3E-28 140.9 12.9 130 8-137 133-266 (357)
38 2xzm_R RACK1; ribosome, transl 99.9 1.2E-22 4E-27 133.0 19.3 120 9-128 71-202 (343)
39 3zwl_B Eukaryotic translation 99.9 4.6E-23 1.6E-27 134.9 17.3 125 4-131 22-153 (369)
40 3k26_A Polycomb protein EED; W 99.9 6.6E-23 2.2E-27 134.1 18.0 120 13-133 68-196 (366)
41 3mkq_A Coatomer beta'-subunit; 99.9 7.4E-23 2.5E-27 146.0 19.1 127 1-131 2-130 (814)
42 3jrp_A Fusion protein of prote 99.9 4.9E-23 1.7E-27 135.3 16.8 122 11-132 8-137 (379)
43 2ymu_A WD-40 repeat protein; u 99.9 5.6E-23 1.9E-27 141.9 17.6 112 11-126 464-577 (577)
44 3vl1_A 26S proteasome regulato 99.9 3E-23 1E-27 138.4 15.7 117 19-137 104-220 (420)
45 3dm0_A Maltose-binding peripla 99.9 1.4E-22 4.8E-27 143.1 19.5 120 9-130 377-504 (694)
46 3vl1_A 26S proteasome regulato 99.9 3.4E-23 1.2E-27 138.1 15.4 126 11-136 136-285 (420)
47 1gxr_A ESG1, transducin-like e 99.9 4.3E-22 1.5E-26 129.0 20.1 128 8-137 91-222 (337)
48 4aow_A Guanine nucleotide-bind 99.9 1.8E-22 6.3E-27 131.0 17.6 124 9-132 166-340 (340)
49 1sq9_A Antiviral protein SKI8; 99.9 2.4E-22 8.3E-27 133.0 18.3 125 11-137 183-330 (397)
50 3gre_A Serine/threonine-protei 99.9 1.4E-22 4.8E-27 136.0 17.0 124 13-137 167-300 (437)
51 3vu4_A KMHSV2; beta-propeller 99.9 2.2E-22 7.4E-27 132.4 17.6 106 25-131 148-273 (355)
52 1k8k_C P40, ARP2/3 complex 41 99.9 2.3E-22 7.8E-27 132.0 17.3 120 13-132 7-130 (372)
53 1sq9_A Antiviral protein SKI8; 99.9 3E-22 1E-26 132.6 17.6 118 14-131 233-397 (397)
54 4e54_B DNA damage-binding prot 99.9 9.8E-23 3.4E-27 137.1 15.1 119 12-130 117-241 (435)
55 2pm7_B Protein transport prote 99.9 2.1E-22 7.1E-27 129.6 15.9 120 10-131 49-191 (297)
56 2aq5_A Coronin-1A; WD40 repeat 99.9 3.1E-22 1.1E-26 133.3 17.1 122 11-132 128-257 (402)
57 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3.1E-22 1.1E-26 135.1 17.3 132 4-137 139-279 (450)
58 3lrv_A PRE-mRNA-splicing facto 99.9 6E-23 2.1E-27 134.3 13.4 120 12-133 123-248 (343)
59 3f3f_A Nucleoporin SEH1; struc 99.9 5.9E-22 2E-26 128.4 17.9 125 10-136 106-344 (351)
60 3dm0_A Maltose-binding peripla 99.9 6.5E-22 2.2E-26 139.7 19.0 127 9-136 425-557 (694)
61 1r5m_A SIR4-interacting protei 99.9 7.1E-22 2.4E-26 131.3 17.7 129 6-137 37-188 (425)
62 3ei3_B DNA damage-binding prot 99.9 1.1E-21 3.7E-26 129.7 18.1 119 13-135 162-288 (383)
63 3v7d_B Cell division control p 99.9 9.2E-22 3.2E-26 132.9 17.9 122 9-133 116-240 (464)
64 1gxr_A ESG1, transducin-like e 99.9 1.3E-21 4.5E-26 126.7 17.7 130 7-137 44-180 (337)
65 3sfz_A APAF-1, apoptotic pepti 99.9 1E-21 3.4E-26 145.5 19.2 127 8-136 609-739 (1249)
66 2j04_B YDR362CP, TAU91; beta p 99.9 1E-22 3.5E-27 140.0 13.0 126 10-135 262-392 (524)
67 3odt_A Protein DOA1; ubiquitin 99.9 1.1E-21 3.6E-26 126.1 17.0 119 13-136 183-303 (313)
68 3ei3_B DNA damage-binding prot 99.9 1.1E-21 3.7E-26 129.7 17.3 125 11-136 70-200 (383)
69 3dwl_C Actin-related protein 2 99.9 6.9E-23 2.4E-27 135.0 11.2 122 8-132 94-239 (377)
70 3k26_A Polycomb protein EED; W 99.9 1.2E-21 4.3E-26 128.0 17.1 131 3-136 8-154 (366)
71 4aez_A CDC20, WD repeat-contai 99.9 2.9E-21 9.8E-26 128.7 18.9 125 11-137 173-301 (401)
72 4aow_A Guanine nucleotide-bind 99.9 4.1E-21 1.4E-25 124.7 19.1 122 10-133 34-163 (340)
73 3dwl_C Actin-related protein 2 99.9 4.8E-23 1.6E-27 135.8 9.6 116 14-131 11-133 (377)
74 3v7d_B Cell division control p 99.9 2.8E-21 9.5E-26 130.6 18.2 123 10-136 266-388 (464)
75 3jrp_A Fusion protein of prote 99.9 2.1E-21 7.2E-26 127.5 16.9 123 9-132 50-194 (379)
76 1k8k_C P40, ARP2/3 complex 41 99.9 3.5E-21 1.2E-25 126.4 17.9 129 7-137 89-241 (372)
77 3jro_A Fusion protein of prote 99.9 7.9E-22 2.7E-26 140.5 15.8 122 10-131 5-134 (753)
78 2oaj_A Protein SNI1; WD40 repe 99.9 1.1E-21 3.7E-26 142.1 16.6 122 12-135 486-670 (902)
79 1pgu_A Actin interacting prote 99.9 6E-22 2E-26 137.3 14.5 118 9-129 483-614 (615)
80 3sfz_A APAF-1, apoptotic pepti 99.9 4.7E-21 1.6E-25 141.9 19.9 126 10-137 653-782 (1249)
81 4aez_A CDC20, WD repeat-contai 99.9 8E-21 2.7E-25 126.6 19.2 120 13-136 133-255 (401)
82 3gre_A Serine/threonine-protei 99.9 5E-22 1.7E-26 133.3 13.4 132 4-136 204-366 (437)
83 3mkq_A Coatomer beta'-subunit; 99.9 5.7E-21 2E-25 136.3 18.5 123 12-136 53-179 (814)
84 2oit_A Nucleoporin 214KDA; NH2 99.9 2.1E-21 7.1E-26 131.0 14.9 117 14-133 92-226 (434)
85 2j04_B YDR362CP, TAU91; beta p 99.9 2.2E-22 7.6E-27 138.4 10.1 118 10-129 304-428 (524)
86 3vu4_A KMHSV2; beta-propeller 99.9 2.9E-21 1E-25 127.1 14.9 122 10-131 191-338 (355)
87 4gq1_A NUP37; propeller, trans 99.9 2.7E-22 9.1E-27 133.6 10.0 110 23-134 100-223 (393)
88 3dw8_B Serine/threonine-protei 99.9 4.1E-21 1.4E-25 128.8 15.8 116 13-130 27-208 (447)
89 3i2n_A WD repeat-containing pr 99.9 3.6E-21 1.2E-25 125.6 14.6 119 12-132 207-356 (357)
90 1pgu_A Actin interacting prote 99.9 2.2E-20 7.6E-25 129.4 19.1 125 11-137 157-291 (615)
91 1r5m_A SIR4-interacting protei 99.9 5.6E-21 1.9E-25 127.0 15.4 117 12-131 245-363 (425)
92 2oaj_A Protein SNI1; WD40 repe 99.9 7.3E-21 2.5E-25 137.8 17.0 119 9-132 12-132 (902)
93 1p22_A F-BOX/WD-repeat protein 99.9 1.3E-20 4.5E-25 126.7 16.8 116 12-133 131-246 (435)
94 3bg1_A Protein SEC13 homolog; 99.9 2.5E-21 8.4E-26 125.6 12.7 121 9-130 52-199 (316)
95 4gga_A P55CDC, cell division c 99.9 2.2E-20 7.7E-25 125.1 17.5 119 12-133 274-399 (420)
96 4gq1_A NUP37; propeller, trans 99.9 3E-21 1E-25 128.5 13.0 124 10-134 132-291 (393)
97 3odt_A Protein DOA1; ubiquitin 99.9 3.1E-20 1.1E-24 119.2 17.3 125 3-135 9-137 (313)
98 4e54_B DNA damage-binding prot 99.9 8.2E-22 2.8E-26 132.6 10.2 119 15-135 210-333 (435)
99 3mmy_A MRNA export factor; mRN 99.9 2.4E-20 8.1E-25 121.9 16.7 126 10-136 82-311 (368)
100 4a11_B DNA excision repair pro 99.9 2.2E-20 7.5E-25 123.7 16.7 122 12-135 184-371 (408)
101 3zwl_B Eukaryotic translation 99.9 2.2E-20 7.5E-25 122.1 16.5 118 12-132 216-349 (369)
102 1p22_A F-BOX/WD-repeat protein 99.9 3.7E-20 1.3E-24 124.5 17.4 123 10-137 169-293 (435)
103 3i2n_A WD repeat-containing pr 99.9 1.3E-20 4.6E-25 122.9 14.8 124 10-135 14-155 (357)
104 3dw8_B Serine/threonine-protei 99.9 7.1E-21 2.4E-25 127.7 13.7 123 11-136 174-323 (447)
105 2pm9_A Protein WEB1, protein t 99.9 5.7E-21 1.9E-25 127.1 13.1 118 14-133 214-341 (416)
106 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.1E-19 3.7E-24 122.4 19.1 120 11-136 196-315 (445)
107 2j04_A TAU60, YPL007P, hypothe 99.9 9.3E-21 3.2E-25 130.1 13.9 114 13-132 84-214 (588)
108 2xyi_A Probable histone-bindin 99.9 5.2E-20 1.8E-24 123.8 17.3 123 11-135 178-316 (430)
109 2ovr_B FBW7, F-BOX/WD repeat p 99.9 5.4E-20 1.9E-24 123.9 17.3 120 11-136 115-235 (445)
110 2vdu_B TRNA (guanine-N(7)-)-me 99.9 5.4E-20 1.8E-24 124.2 17.1 119 11-130 192-342 (450)
111 4ggc_A P55CDC, cell division c 99.9 1.3E-19 4.5E-24 116.6 17.6 119 12-132 148-318 (318)
112 1yfq_A Cell cycle arrest prote 99.9 7.3E-21 2.5E-25 123.7 11.7 115 11-129 8-131 (342)
113 3lrv_A PRE-mRNA-splicing facto 99.9 5.4E-20 1.8E-24 120.3 15.8 106 27-133 88-205 (343)
114 4gga_A P55CDC, cell division c 99.9 1.1E-19 3.7E-24 121.8 17.5 126 3-131 136-263 (420)
115 3jro_A Fusion protein of prote 99.9 2.9E-20 9.8E-25 132.6 15.2 122 9-131 48-191 (753)
116 2pm9_A Protein WEB1, protein t 99.9 1.5E-20 5E-25 125.1 12.9 126 11-137 162-302 (416)
117 2xyi_A Probable histone-bindin 99.9 7.3E-20 2.5E-24 123.0 16.2 117 11-129 228-353 (430)
118 4ggc_A P55CDC, cell division c 99.9 2.3E-19 7.7E-24 115.5 17.8 127 3-132 56-184 (318)
119 1yfq_A Cell cycle arrest prote 99.8 1.3E-19 4.4E-24 117.8 15.5 123 13-136 149-289 (342)
120 4a11_B DNA excision repair pro 99.8 4.6E-19 1.6E-23 117.3 17.1 123 11-136 40-182 (408)
121 4h5i_A Guanine nucleotide-exch 99.8 9.7E-19 3.3E-23 115.5 16.6 122 13-136 175-307 (365)
122 2w18_A PALB2, fancn, partner a 99.8 5E-18 1.7E-22 110.6 16.9 124 12-136 134-276 (356)
123 2j04_A TAU60, YPL007P, hypothe 99.8 1E-18 3.5E-23 120.1 13.7 110 17-132 132-257 (588)
124 1l0q_A Surface layer protein; 99.8 6.8E-17 2.3E-21 106.9 20.7 117 17-137 34-155 (391)
125 3bws_A Protein LP49; two-domai 99.8 2.2E-17 7.5E-22 110.5 17.2 122 12-136 167-299 (433)
126 3bws_A Protein LP49; two-domai 99.8 8.4E-18 2.9E-22 112.5 14.6 117 18-136 128-250 (433)
127 1l0q_A Surface layer protein; 99.8 4.6E-16 1.6E-20 102.9 21.2 117 17-137 162-283 (391)
128 2oit_A Nucleoporin 214KDA; NH2 99.8 3.8E-17 1.3E-21 110.3 16.0 119 11-130 146-279 (434)
129 2hqs_A Protein TOLB; TOLB, PAL 99.7 4.4E-15 1.5E-19 99.6 19.1 116 13-132 177-303 (415)
130 1nir_A Nitrite reductase; hemo 99.7 1.4E-15 4.7E-20 105.2 16.1 117 17-137 142-265 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 99.7 5.7E-15 1.9E-19 99.1 14.0 106 24-133 143-260 (415)
132 3vgz_A Uncharacterized protein 99.6 1.7E-13 5.9E-18 89.2 18.7 120 18-137 146-270 (353)
133 1pby_B Quinohemoprotein amine 99.6 1.5E-13 5.2E-18 88.8 18.2 78 56-138 242-319 (337)
134 3vgz_A Uncharacterized protein 99.6 2.1E-13 7.2E-18 88.8 18.8 118 16-137 188-311 (353)
135 1nir_A Nitrite reductase; hemo 99.6 3.1E-13 1.1E-17 93.6 19.2 130 3-134 170-316 (543)
136 1ri6_A Putative isomerase YBHE 99.6 1.2E-13 3.9E-18 89.6 15.1 112 17-132 42-164 (343)
137 3u4y_A Uncharacterized protein 99.6 7.1E-13 2.4E-17 85.8 18.8 113 17-132 44-163 (331)
138 1pby_B Quinohemoprotein amine 99.6 1.6E-13 5.3E-18 88.8 13.8 113 25-137 2-132 (337)
139 2ecf_A Dipeptidyl peptidase IV 99.6 6.2E-14 2.1E-18 99.6 12.9 112 18-134 42-186 (741)
140 3u4y_A Uncharacterized protein 99.6 3.3E-13 1.1E-17 87.4 14.9 112 23-137 9-125 (331)
141 1ri6_A Putative isomerase YBHE 99.6 8.7E-13 3E-17 85.5 16.7 110 18-129 89-209 (343)
142 2ojh_A Uncharacterized protein 99.5 4.5E-13 1.5E-17 84.9 13.9 115 19-135 135-264 (297)
143 1jmx_B Amine dehydrogenase; ox 99.5 1.5E-13 5E-18 89.4 11.9 111 21-131 8-136 (349)
144 3o4h_A Acylamino-acid-releasin 99.5 8.9E-14 3.1E-18 96.6 11.4 112 16-133 153-278 (582)
145 1xfd_A DIP, dipeptidyl aminope 99.5 1.1E-14 3.7E-19 103.1 6.6 113 21-135 25-149 (723)
146 1k32_A Tricorn protease; prote 99.5 4.4E-13 1.5E-17 98.7 15.3 114 16-132 339-464 (1045)
147 1jmx_B Amine dehydrogenase; ox 99.5 1.8E-12 6E-17 84.3 16.5 78 56-138 256-334 (349)
148 2z3z_A Dipeptidyl aminopeptida 99.5 2.5E-13 8.6E-18 96.1 12.7 113 18-131 126-295 (706)
149 3hfq_A Uncharacterized protein 99.5 1.2E-11 4.1E-16 80.7 19.8 113 17-129 90-218 (347)
150 3scy_A Hypothetical bacterial 99.5 3.3E-12 1.1E-16 83.8 17.2 114 18-134 216-344 (361)
151 3hfq_A Uncharacterized protein 99.5 3.7E-12 1.3E-16 83.1 17.0 114 18-132 45-175 (347)
152 2ecf_A Dipeptidyl peptidase IV 99.5 4E-13 1.4E-17 95.5 12.8 100 18-120 114-230 (741)
153 1k32_A Tricorn protease; prote 99.5 6.5E-13 2.2E-17 97.8 14.1 116 12-130 376-503 (1045)
154 2ojh_A Uncharacterized protein 99.5 1.6E-12 5.6E-17 82.3 13.9 111 13-128 40-159 (297)
155 1z68_A Fibroblast activation p 99.5 1.2E-13 4E-18 98.0 8.2 111 19-134 22-144 (719)
156 1xfd_A DIP, dipeptidyl aminope 99.5 2.7E-13 9.4E-18 96.0 9.0 100 17-119 65-193 (723)
157 3o4h_A Acylamino-acid-releasin 99.5 2E-12 6.7E-17 89.9 13.0 111 16-133 113-231 (582)
158 1xip_A Nucleoporin NUP159; bet 99.5 5.6E-12 1.9E-16 83.8 14.3 105 17-132 90-194 (388)
159 3scy_A Hypothetical bacterial 99.4 1.1E-10 3.7E-15 76.6 18.5 114 18-131 160-295 (361)
160 1q7f_A NHL, brain tumor CG1071 99.4 7.1E-11 2.4E-15 75.2 17.1 114 16-132 165-283 (286)
161 3no2_A Uncharacterized protein 99.4 3E-11 1E-15 77.1 15.1 110 23-137 4-115 (276)
162 2z3z_A Dipeptidyl aminopeptida 99.4 6.2E-12 2.1E-16 89.0 12.5 117 17-133 185-347 (706)
163 1z68_A Fibroblast activation p 99.4 9.1E-13 3.1E-17 93.5 8.0 99 17-119 64-189 (719)
164 1jof_A Carboxy-CIS,CIS-muconat 99.4 8.4E-11 2.9E-15 77.5 16.3 101 32-132 117-229 (365)
165 4a5s_A Dipeptidyl peptidase 4 99.4 2.9E-12 1E-16 91.4 9.0 110 19-134 23-146 (740)
166 1qks_A Cytochrome CD1 nitrite 99.4 1.3E-10 4.4E-15 81.0 16.7 113 22-138 165-284 (567)
167 3azo_A Aminopeptidase; POP fam 99.4 3.4E-11 1.2E-15 84.7 13.8 113 18-133 135-278 (662)
168 2oiz_A Aromatic amine dehydrog 99.4 1.3E-11 4.5E-16 81.5 11.1 111 23-135 14-146 (361)
169 1jof_A Carboxy-CIS,CIS-muconat 99.3 4.8E-11 1.6E-15 78.7 13.3 116 17-133 44-181 (365)
170 2dg1_A DRP35, lactonase; beta 99.3 2.4E-09 8.1E-14 69.4 19.0 116 17-132 47-174 (333)
171 3sjl_D Methylamine dehydrogena 99.3 2.3E-10 7.8E-15 76.0 13.8 115 22-138 42-178 (386)
172 3fvz_A Peptidyl-glycine alpha- 99.3 1.7E-09 5.8E-14 70.4 16.9 117 19-136 97-234 (329)
173 1q7f_A NHL, brain tumor CG1071 99.3 2.2E-09 7.4E-14 68.3 17.0 117 17-136 123-244 (286)
174 3pe7_A Oligogalacturonate lyas 99.3 1.9E-10 6.5E-15 75.9 12.5 115 19-135 42-183 (388)
175 1qks_A Cytochrome CD1 nitrite 99.3 3E-09 1E-13 74.2 18.7 134 3-138 188-382 (567)
176 4a5s_A Dipeptidyl peptidase 4 99.2 8.6E-11 2.9E-15 84.0 10.8 98 18-117 67-189 (740)
177 3fvz_A Peptidyl-glycine alpha- 99.2 9.8E-10 3.4E-14 71.5 14.7 111 19-130 202-323 (329)
178 2bkl_A Prolyl endopeptidase; m 99.2 2.3E-10 7.8E-15 81.3 12.3 113 19-132 127-264 (695)
179 3no2_A Uncharacterized protein 99.2 4.5E-09 1.5E-13 67.0 16.1 112 21-137 85-203 (276)
180 2xdw_A Prolyl endopeptidase; a 99.2 1.3E-09 4.6E-14 77.5 14.4 110 19-129 131-268 (710)
181 2gop_A Trilobed protease; beta 99.2 3.1E-09 1.1E-13 69.1 14.4 101 23-132 23-164 (347)
182 3azo_A Aminopeptidase; POP fam 99.1 1.8E-09 6.3E-14 76.0 13.3 110 19-131 194-327 (662)
183 3dsm_A Uncharacterized protein 99.1 1.7E-08 5.9E-13 65.7 16.4 106 23-132 140-256 (328)
184 2mad_H Methylamine dehydrogena 99.1 1.1E-08 3.9E-13 67.8 15.6 111 22-135 30-162 (373)
185 3c75_H MADH, methylamine dehyd 99.1 3.8E-09 1.3E-13 71.2 13.0 114 23-138 83-218 (426)
186 3dsm_A Uncharacterized protein 99.1 2.2E-08 7.4E-13 65.2 16.1 118 18-137 47-169 (328)
187 3pe7_A Oligogalacturonate lyas 99.1 1E-08 3.5E-13 67.6 14.5 112 18-132 86-228 (388)
188 1xip_A Nucleoporin NUP159; bet 99.1 6.3E-09 2.2E-13 69.3 13.2 97 12-115 124-230 (388)
189 2oiz_A Aromatic amine dehydrog 99.1 4.7E-09 1.6E-13 69.3 12.5 89 18-111 259-360 (361)
190 2gop_A Trilobed protease; beta 99.1 1.1E-08 3.9E-13 66.5 13.9 95 18-119 64-190 (347)
191 1rwi_B Serine/threonine-protei 99.1 6.6E-09 2.3E-13 65.4 12.0 113 19-133 156-268 (270)
192 3e5z_A Putative gluconolactona 99.0 5.5E-08 1.9E-12 62.1 15.6 97 18-116 33-132 (296)
193 2dg1_A DRP35, lactonase; beta 99.0 3.5E-09 1.2E-13 68.6 10.1 112 17-133 8-125 (333)
194 1yr2_A Prolyl oligopeptidase; 99.0 1.1E-08 3.6E-13 73.3 11.8 110 19-130 169-304 (741)
195 3e5z_A Putative gluconolactona 99.0 1.5E-07 5E-12 60.2 16.0 112 19-137 121-253 (296)
196 2z2n_A Virginiamycin B lyase; 98.9 6.5E-07 2.2E-11 56.8 17.5 122 6-132 6-131 (299)
197 3c5m_A Oligogalacturonate lyas 98.9 2.2E-09 7.6E-14 70.8 6.2 115 19-135 42-183 (396)
198 3c5m_A Oligogalacturonate lyas 98.9 5.5E-08 1.9E-12 64.1 12.6 110 19-133 194-333 (396)
199 2hz6_A Endoplasmic reticulum t 98.9 1.8E-10 6.2E-15 76.3 0.1 110 23-136 8-118 (369)
200 2z2n_A Virginiamycin B lyase; 98.9 1E-06 3.5E-11 55.8 17.3 114 15-133 57-174 (299)
201 1kb0_A Quinohemoprotein alcoho 98.9 1.7E-07 5.7E-12 66.8 14.7 113 23-138 323-516 (677)
202 1rwi_B Serine/threonine-protei 98.9 8.7E-08 3E-12 60.2 12.0 113 17-131 110-224 (270)
203 3nok_A Glutaminyl cyclase; bet 98.9 9E-07 3.1E-11 55.9 16.1 127 4-138 45-173 (268)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 6.5E-07 2.2E-11 57.3 16.0 107 22-130 185-300 (314)
205 2iwa_A Glutamine cyclotransfer 98.8 2.2E-06 7.4E-11 54.4 17.4 132 2-138 9-144 (266)
206 2iwa_A Glutamine cyclotransfer 98.8 1.3E-06 4.5E-11 55.4 16.1 112 23-138 75-190 (266)
207 3sjl_D Methylamine dehydrogena 98.8 2.9E-07 9.8E-12 61.3 13.6 121 2-129 69-208 (386)
208 3mbr_X Glutamine cyclotransfer 98.8 3.3E-06 1.1E-10 52.8 18.3 130 2-138 9-142 (243)
209 1mda_H Methylamine dehydrogena 98.8 7.6E-08 2.6E-12 63.8 10.7 102 26-129 34-158 (368)
210 2qc5_A Streptogramin B lactona 98.8 3.1E-06 1.1E-10 53.7 17.6 123 7-133 12-137 (300)
211 3nol_A Glutamine cyclotransfer 98.8 2.4E-06 8E-11 54.0 16.5 130 2-138 31-164 (262)
212 1yiq_A Quinohemoprotein alcoho 98.8 5.8E-07 2E-11 64.2 15.4 115 21-138 313-514 (689)
213 3g4e_A Regucalcin; six bladed 98.8 2.4E-06 8.1E-11 54.8 17.0 123 16-138 99-238 (297)
214 3nol_A Glutamine cyclotransfer 98.8 1.2E-06 4.2E-11 55.2 14.5 115 20-138 92-210 (262)
215 2mad_H Methylamine dehydrogena 98.8 2.4E-06 8.2E-11 56.7 16.5 102 31-135 231-356 (373)
216 2hz6_A Endoplasmic reticulum t 98.7 2.4E-09 8.2E-14 70.9 1.8 107 23-137 91-200 (369)
217 3mbr_X Glutamine cyclotransfer 98.7 6.4E-06 2.2E-10 51.5 17.0 112 23-138 74-188 (243)
218 3hrp_A Uncharacterized protein 98.7 1.4E-06 4.7E-11 58.6 14.8 114 17-132 133-252 (409)
219 2qc5_A Streptogramin B lactona 98.7 7.4E-06 2.5E-10 51.9 17.6 114 15-133 62-179 (300)
220 3nok_A Glutaminyl cyclase; bet 98.7 1.7E-06 5.7E-11 54.7 13.4 115 20-138 101-219 (268)
221 2xdw_A Prolyl endopeptidase; a 98.7 2.1E-06 7.2E-11 61.3 14.9 118 19-137 239-376 (710)
222 3iuj_A Prolyl endopeptidase; h 98.7 3.9E-07 1.3E-11 64.9 11.2 109 19-130 135-269 (693)
223 2bkl_A Prolyl endopeptidase; m 98.7 5.7E-07 2E-11 64.0 12.0 110 18-131 173-306 (695)
224 2qe8_A Uncharacterized protein 98.6 4.8E-06 1.7E-10 54.5 14.9 114 20-134 24-159 (343)
225 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 5.1E-06 1.7E-10 53.1 14.8 118 17-136 119-263 (314)
226 3hrp_A Uncharacterized protein 98.6 3.1E-05 1.1E-09 52.0 17.4 109 18-128 272-409 (409)
227 3dr2_A Exported gluconolactona 98.6 1.3E-05 4.5E-10 51.4 15.0 108 19-131 92-226 (305)
228 3q7m_A Lipoprotein YFGL, BAMB; 98.5 2.3E-05 8E-10 51.6 16.4 110 23-137 52-170 (376)
229 3c75_H MADH, methylamine dehyd 98.5 5.9E-06 2E-10 55.8 13.2 91 2-94 109-218 (426)
230 3dr2_A Exported gluconolactona 98.5 2.8E-05 9.7E-10 49.9 16.0 112 19-133 51-182 (305)
231 1fwx_A Nitrous oxide reductase 98.5 9.8E-06 3.3E-10 56.7 14.4 91 35-129 255-361 (595)
232 2ece_A 462AA long hypothetical 98.5 4E-06 1.4E-10 56.8 12.0 115 23-138 94-246 (462)
233 2ece_A 462AA long hypothetical 98.5 5.8E-06 2E-10 56.1 12.3 110 20-130 145-290 (462)
234 2ad6_A Methanol dehydrogenase 98.5 6.8E-06 2.3E-10 57.5 12.8 113 23-138 312-503 (571)
235 1kv9_A Type II quinohemoprotei 98.5 1.4E-05 4.9E-10 56.9 14.4 116 20-138 307-497 (668)
236 1kb0_A Quinohemoprotein alcoho 98.4 1.1E-05 3.9E-10 57.5 13.7 115 24-138 174-355 (677)
237 1flg_A Protein (quinoprotein e 98.4 1.7E-05 6E-10 55.6 13.4 111 25-138 337-525 (582)
238 3q7m_A Lipoprotein YFGL, BAMB; 98.4 5.6E-05 1.9E-09 49.8 14.8 109 23-138 238-346 (376)
239 1yr2_A Prolyl oligopeptidase; 98.4 6.4E-05 2.2E-09 54.0 15.8 112 19-134 274-399 (741)
240 1yiq_A Quinohemoprotein alcoho 98.3 4.1E-05 1.4E-09 54.8 14.5 105 33-137 182-346 (689)
241 1mda_H Methylamine dehydrogena 98.3 9.2E-06 3.1E-10 53.9 10.4 75 60-137 269-354 (368)
242 3g4e_A Regucalcin; six bladed 98.3 0.00014 4.9E-09 46.5 19.5 94 19-116 19-115 (297)
243 2ghs_A AGR_C_1268P; regucalcin 98.3 0.00017 5.7E-09 46.8 17.6 118 16-137 135-267 (326)
244 2ghs_A AGR_C_1268P; regucalcin 98.3 0.00023 8E-09 46.2 15.9 96 19-117 185-290 (326)
245 2qe8_A Uncharacterized protein 98.2 9.7E-05 3.3E-09 48.3 13.7 111 15-126 67-223 (343)
246 1w6s_A Methanol dehydrogenase 98.2 5.2E-05 1.8E-09 53.5 12.7 62 74-138 451-512 (599)
247 1kv9_A Type II quinohemoprotei 98.2 0.00011 3.7E-09 52.5 14.2 105 33-137 177-341 (668)
248 2xe4_A Oligopeptidase B; hydro 98.2 3.2E-05 1.1E-09 55.8 10.7 111 16-130 177-305 (751)
249 1fwx_A Nitrous oxide reductase 98.1 0.00015 5.2E-09 50.9 12.5 105 22-130 145-309 (595)
250 3hxj_A Pyrrolo-quinoline quino 98.0 0.00022 7.4E-09 45.9 12.0 104 24-136 107-210 (330)
251 3hxj_A Pyrrolo-quinoline quino 98.0 0.00033 1.1E-08 45.0 12.4 104 24-136 147-250 (330)
252 1k3i_A Galactose oxidase precu 98.0 0.00054 1.8E-08 48.7 14.0 115 19-134 192-328 (656)
253 1w6s_A Methanol dehydrogenase 98.0 0.00079 2.7E-08 47.6 14.3 106 32-137 180-350 (599)
254 3iuj_A Prolyl endopeptidase; h 97.9 0.00033 1.1E-08 50.1 11.6 110 20-133 287-409 (693)
255 2ad6_A Methanol dehydrogenase 97.8 0.0024 8.3E-08 44.8 14.8 115 24-138 160-344 (571)
256 1flg_A Protein (quinoprotein e 97.8 0.0021 7.3E-08 45.2 14.4 63 76-138 291-364 (582)
257 3tc9_A Hypothetical hydrolase; 97.8 0.003 1E-07 42.8 17.0 72 56-128 227-300 (430)
258 1npe_A Nidogen, entactin; glyc 97.7 0.0025 8.5E-08 40.0 16.6 114 19-137 128-246 (267)
259 2p4o_A Hypothetical protein; p 97.7 0.0036 1.2E-07 40.2 17.4 109 19-130 38-148 (306)
260 2be1_A Serine/threonine-protei 97.6 0.00044 1.5E-08 45.4 8.1 114 24-138 10-139 (339)
261 3amr_A 3-phytase; beta-propell 97.6 0.0063 2.1E-07 40.2 15.9 111 26-137 145-272 (355)
262 3tc9_A Hypothetical hydrolase; 97.5 0.0061 2.1E-07 41.3 13.1 109 19-132 143-260 (430)
263 2fp8_A Strictosidine synthase; 97.5 0.008 2.7E-07 38.7 14.9 102 24-129 91-216 (322)
264 3qqz_A Putative uncharacterize 97.4 0.0083 2.8E-07 37.8 11.7 78 52-131 24-102 (255)
265 1npe_A Nidogen, entactin; glyc 97.3 0.012 4.1E-07 36.8 18.4 104 24-129 48-155 (267)
266 2p4o_A Hypothetical protein; p 97.3 0.015 5.1E-07 37.3 12.8 76 55-134 32-109 (306)
267 2fp8_A Strictosidine synthase; 97.2 0.016 5.5E-07 37.3 16.1 99 33-136 164-275 (322)
268 3pbp_A Nucleoporin NUP82; beta 97.2 0.023 8E-07 38.6 14.5 106 23-130 31-159 (452)
269 2p9w_A MAL S 1 allergenic prot 97.2 0.019 6.6E-07 37.6 13.6 98 33-130 99-216 (334)
270 3qqz_A Putative uncharacterize 97.2 0.017 5.9E-07 36.4 17.6 115 12-128 24-150 (255)
271 4hw6_A Hypothetical protein, I 97.2 0.025 8.7E-07 38.4 14.8 73 56-128 229-303 (433)
272 3pbp_A Nucleoporin NUP82; beta 97.2 0.026 8.9E-07 38.4 13.0 107 18-126 71-209 (452)
273 3amr_A 3-phytase; beta-propell 97.1 0.015 5.1E-07 38.5 10.9 100 24-127 40-160 (355)
274 3v64_C Agrin; beta propeller, 97.1 0.024 8.2E-07 37.2 15.3 111 18-130 121-235 (349)
275 2xe4_A Oligopeptidase B; hydro 96.9 0.038 1.3E-06 40.1 12.4 109 20-129 228-354 (751)
276 3v65_B Low-density lipoprotein 96.8 0.053 1.8E-06 36.1 15.0 110 19-130 165-278 (386)
277 2p9w_A MAL S 1 allergenic prot 96.8 0.051 1.8E-06 35.6 12.9 111 18-128 16-167 (334)
278 1k3i_A Galactose oxidase precu 96.7 0.014 4.8E-07 41.6 8.9 96 23-118 410-530 (656)
279 3sov_A LRP-6, low-density lipo 96.7 0.06 2.1E-06 34.9 16.2 110 18-129 84-197 (318)
280 1ijq_A LDL receptor, low-densi 96.7 0.06 2.1E-06 34.8 18.3 111 18-130 82-196 (316)
281 1n7d_A LDL receptor, low-densi 96.6 0.01 3.5E-07 42.8 7.7 106 23-130 464-572 (699)
282 3v65_B Low-density lipoprotein 96.6 0.081 2.8E-06 35.2 15.1 115 19-136 208-325 (386)
283 3m0c_C LDL receptor, low-densi 96.5 0.15 5.2E-06 37.4 18.3 113 18-132 476-592 (791)
284 1ijq_A LDL receptor, low-densi 96.3 0.1 3.5E-06 33.7 16.5 116 19-136 126-245 (316)
285 3v64_C Agrin; beta propeller, 96.3 0.12 4E-06 34.0 17.0 106 23-130 84-192 (349)
286 3kya_A Putative phosphatase; s 96.3 0.16 5.6E-06 35.2 13.9 71 57-128 249-340 (496)
287 4hw6_A Hypothetical protein, I 96.2 0.15 5.2E-06 34.6 13.7 111 19-130 234-374 (433)
288 1n7d_A LDL receptor, low-densi 96.2 0.025 8.5E-07 40.8 7.4 101 34-136 519-621 (699)
289 4a2l_A BT_4663, two-component 96.1 0.26 9E-06 35.9 15.1 114 15-132 406-529 (795)
290 3p5b_L Low density lipoprotein 96.0 0.18 6.3E-06 33.8 18.8 112 18-131 164-279 (400)
291 2vpj_A Kelch-like protein 12; 95.8 0.19 6.5E-06 31.9 12.7 109 22-134 158-283 (301)
292 3p5b_L Low density lipoprotein 95.6 0.29 9.8E-06 32.8 16.3 117 19-136 208-327 (400)
293 3sbq_A Nitrous-oxide reductase 95.6 0.16 5.6E-06 35.9 9.2 73 56-129 324-408 (638)
294 3kya_A Putative phosphatase; s 95.6 0.34 1.2E-05 33.6 12.1 108 18-128 144-277 (496)
295 3ei3_A DNA damage-binding prot 95.5 0.61 2.1E-05 35.9 17.5 98 36-137 494-599 (1158)
296 3ei3_A DNA damage-binding prot 95.4 0.67 2.3E-05 35.7 16.0 112 13-129 884-999 (1158)
297 4a2l_A BT_4663, two-component 95.4 0.53 1.8E-05 34.3 14.8 113 16-132 358-483 (795)
298 3v9f_A Two-component system se 95.0 0.68 2.3E-05 33.7 14.8 112 15-131 450-570 (781)
299 3v9f_A Two-component system se 94.9 0.73 2.5E-05 33.5 12.7 114 15-132 363-481 (781)
300 2xn4_A Kelch-like protein 2; s 94.8 0.43 1.5E-05 30.3 13.2 108 22-133 154-280 (302)
301 3sov_A LRP-6, low-density lipo 94.8 0.48 1.6E-05 30.7 16.3 101 33-136 144-245 (318)
302 3ii7_A Kelch-like protein 7; p 94.7 0.48 1.6E-05 30.1 11.9 109 22-134 148-277 (306)
303 4asc_A Kelch repeat and BTB do 94.6 0.49 1.7E-05 30.2 11.3 109 22-134 147-282 (315)
304 2xn4_A Kelch-like protein 2; s 94.6 0.48 1.6E-05 30.0 11.5 109 22-134 107-234 (302)
305 3ii7_A Kelch-like protein 7; p 94.6 0.5 1.7E-05 30.0 13.0 108 22-133 54-182 (306)
306 3s94_A LRP-6, low-density lipo 94.6 0.85 2.9E-05 32.6 14.2 111 18-130 89-203 (619)
307 1zgk_A Kelch-like ECH-associat 94.4 0.55 1.9E-05 29.9 12.1 108 22-133 120-244 (308)
308 4gq2_M Nucleoporin NUP120; bet 94.4 0.13 4.4E-06 38.6 6.4 38 101-138 238-275 (950)
309 4fhn_B Nucleoporin NUP120; pro 94.4 0.68 2.3E-05 35.5 10.3 38 101-138 240-277 (1139)
310 3m0c_C LDL receptor, low-densi 94.3 1.1 3.9E-05 33.0 16.5 117 19-136 520-639 (791)
311 2vpj_A Kelch-like protein 12; 93.8 0.74 2.5E-05 29.1 14.0 109 22-134 111-236 (301)
312 2be1_A Serine/threonine-protei 93.8 0.41 1.4E-05 31.5 7.3 69 67-136 11-83 (339)
313 4asc_A Kelch repeat and BTB do 93.8 0.79 2.7E-05 29.3 11.0 108 23-134 98-226 (315)
314 2zwa_A Leucine carboxyl methyl 93.6 1.5 5E-05 31.8 11.1 108 23-131 451-579 (695)
315 3sre_A PON1, serum paraoxonase 93.6 1 3.5E-05 29.9 14.9 94 33-129 138-252 (355)
316 3zwu_A Alkaline phosphatase PH 93.5 0.74 2.5E-05 32.8 8.6 59 57-116 478-548 (592)
317 2xzh_A Clathrin heavy chain 1; 93.4 1.1 3.7E-05 29.8 14.4 107 21-131 75-191 (365)
318 1zgk_A Kelch-like ECH-associat 93.4 0.92 3.1E-05 28.9 13.7 109 22-134 167-292 (308)
319 4a0p_A LRP6, LRP-6, low-densit 93.3 1.6 5.4E-05 31.3 15.7 111 18-131 85-199 (628)
320 1cru_A Protein (soluble quinop 93.3 1.3 4.5E-05 30.3 16.2 101 18-118 32-163 (454)
321 3a9g_A Putative uncharacterize 93.2 1.2 4E-05 29.4 15.2 96 19-117 35-153 (354)
322 2zwa_A Leucine carboxyl methyl 93.2 1.8 6E-05 31.4 10.7 111 23-133 500-639 (695)
323 4a0p_A LRP6, LRP-6, low-densit 93.0 1.8 6E-05 31.0 15.8 106 23-130 48-156 (628)
324 1tl2_A L10, protein (tachylect 93.0 0.57 2E-05 29.1 6.5 68 55-127 41-114 (236)
325 1bpo_A Protein (clathrin); cla 92.6 1.8 6.1E-05 30.0 18.1 132 7-139 98-299 (494)
326 1tl2_A L10, protein (tachylect 92.5 1.1 3.6E-05 28.0 7.3 98 18-123 46-157 (236)
327 3sre_A PON1, serum paraoxonase 92.3 1.6 5.6E-05 28.9 14.1 78 34-117 203-285 (355)
328 1cru_A Protein (soluble quinop 92.2 1.9 6.6E-05 29.5 11.3 55 55-109 27-87 (454)
329 2woz_A Kelch repeat and BTB do 92.1 1.5 5.1E-05 28.0 10.7 107 23-133 109-235 (318)
330 2xzh_A Clathrin heavy chain 1; 92.0 1.8 6.3E-05 28.7 18.9 132 7-139 99-300 (365)
331 3a9g_A Putative uncharacterize 91.8 1.9 6.4E-05 28.4 10.0 74 55-130 29-115 (354)
332 3das_A Putative oxidoreductase 91.6 2 6.8E-05 28.4 16.0 99 18-117 37-158 (347)
333 3f7f_A Nucleoporin NUP120; nuc 91.5 0.62 2.1E-05 34.0 6.2 36 101-138 224-259 (729)
334 4a9v_A PHOX; hydrolase, beta-p 91.2 3 0.0001 29.8 9.5 60 56-116 477-548 (592)
335 2uvk_A YJHT; unknown function, 90.9 2.2 7.5E-05 27.7 10.9 99 34-134 168-299 (357)
336 2ism_A Putative oxidoreductase 90.9 2.3 7.8E-05 27.9 16.4 96 19-117 37-153 (352)
337 3f7f_A Nucleoporin NUP120; nuc 90.8 0.6 2.1E-05 34.0 5.6 38 15-52 222-259 (729)
338 3sbq_A Nitrous-oxide reductase 90.3 2.6 9E-05 30.1 8.2 91 27-118 73-196 (638)
339 2g8s_A Glucose/sorbosone dehyd 90.3 2.2 7.4E-05 28.0 7.7 71 56-129 19-107 (353)
340 1xi4_A Clathrin heavy chain; a 90.0 6.5 0.00022 31.6 11.8 126 12-138 103-298 (1630)
341 2ism_A Putative oxidoreductase 89.8 2.9 0.0001 27.4 13.7 73 55-130 31-115 (352)
342 2xbg_A YCF48-like protein; pho 88.0 3.9 0.00013 26.4 16.0 104 16-122 164-272 (327)
343 4gq2_M Nucleoporin NUP120; bet 87.8 1.4 4.9E-05 33.2 5.9 37 56-92 237-273 (950)
344 1bpo_A Protein (clathrin); cla 87.5 5.5 0.00019 27.7 10.8 67 19-85 265-331 (494)
345 3s94_A LRP-6, low-density lipo 87.3 6.4 0.00022 28.2 16.7 110 18-130 397-511 (619)
346 2woz_A Kelch repeat and BTB do 86.5 4.6 0.00016 25.7 12.2 110 21-134 54-189 (318)
347 2uvk_A YJHT; unknown function, 86.4 5 0.00017 26.0 11.9 95 22-119 18-128 (357)
348 1xi4_A Clathrin heavy chain; a 86.1 7 0.00024 31.5 8.7 104 23-130 76-189 (1630)
349 2g8s_A Glucose/sorbosone dehyd 85.9 5.6 0.00019 26.1 14.0 99 18-118 23-149 (353)
350 3das_A Putative oxidoreductase 85.5 6 0.00021 26.2 12.2 76 54-129 31-116 (347)
351 2wg3_C Hedgehog-interacting pr 83.9 8.5 0.00029 26.5 14.8 101 19-119 20-159 (463)
352 4fhn_B Nucleoporin NUP120; pro 82.6 1.5 5.1E-05 33.7 4.1 36 58-93 241-276 (1139)
353 3al9_A Plexin-A2; beta-propell 80.3 13 0.00044 26.3 7.8 69 56-124 401-476 (539)
354 2xbg_A YCF48-like protein; pho 76.4 13 0.00044 24.0 15.1 102 17-125 124-230 (327)
355 3s25_A Hypothetical 7-bladed b 76.1 13 0.00044 23.9 10.5 104 17-132 57-179 (302)
356 4gz8_A Semaphorin-3A; multi-do 75.1 22 0.00074 26.0 8.6 57 68-124 431-495 (667)
357 1q47_A Semaphorin 3A; beta pro 73.4 21 0.00071 25.0 7.9 69 56-124 405-487 (495)
358 3nvq_A Semaphorin-7A; beta-pro 55.2 56 0.0019 23.6 7.9 57 68-124 382-444 (590)
359 2wg3_C Hedgehog-interacting pr 51.9 56 0.0019 22.6 8.0 53 56-109 15-79 (463)
360 3zwu_A Alkaline phosphatase PH 50.6 68 0.0023 23.1 8.6 53 20-72 483-548 (592)
361 3s25_A Hypothetical 7-bladed b 49.5 49 0.0017 21.2 10.6 101 19-130 110-217 (302)
362 3ol2_B Plexin-B1; beta-propell 48.3 70 0.0024 22.7 7.2 68 56-124 388-461 (528)
363 3q6k_A 43.2 kDa salivary prote 47.7 62 0.0021 21.8 10.8 81 55-135 87-196 (381)
364 3oky_A Plexin-A2; transmembran 44.0 94 0.0032 22.9 7.3 58 67-124 413-475 (681)
365 1suu_A DNA gyrase subunit A; t 41.7 69 0.0024 20.7 11.7 104 23-128 113-230 (312)
366 4h3o_A Lectin; cadmium, plant 41.4 39 0.0013 17.8 7.5 13 71-83 56-68 (105)
367 4a9v_A PHOX; hydrolase, beta-p 41.1 1E+02 0.0034 22.4 8.6 38 35-72 510-548 (592)
368 3mez_B Mannose-specific lectin 40.1 43 0.0015 17.9 8.2 9 74-82 65-73 (113)
369 3al9_A Plexin-A2; beta-propell 37.4 1.1E+02 0.0036 21.8 5.8 58 23-80 412-476 (539)
370 3oky_B Putative uncharacterize 36.7 1.2E+02 0.004 21.9 8.2 69 56-124 404-495 (565)
371 1q47_A Semaphorin 3A; beta pro 33.4 1.2E+02 0.0042 21.2 6.5 55 26-80 423-487 (495)
372 1b2p_A Protein (lectin); manno 31.9 64 0.0022 17.4 6.7 44 69-114 64-107 (119)
373 3ott_A Two-component system se 31.0 1.5E+02 0.0053 21.5 13.3 108 16-131 147-262 (758)
374 3a0c_A Mannose/sialic acid-bin 30.4 65 0.0022 17.0 7.4 44 69-114 54-97 (110)
375 2dk7_A Transcription elongatio 30.0 57 0.0019 16.2 3.1 25 109-133 19-43 (73)
376 1olz_A Semaphorin 4D; developm 29.8 1.7E+02 0.0057 21.5 9.0 69 56-124 398-477 (663)
377 1zso_A Hypothetical protein; s 29.5 88 0.003 18.3 4.3 30 101-130 112-141 (164)
378 3qhy_B Beta-lactamase inhibito 28.1 1.2E+02 0.004 19.2 7.7 66 56-129 181-246 (282)
379 1uhe_A Aspartate 1-decarboxyla 28.1 71 0.0024 16.9 2.9 18 120-137 17-34 (97)
380 1vc3_B L-aspartate-alpha-decar 27.5 74 0.0025 16.8 2.9 18 120-137 18-35 (96)
381 3ott_A Two-component system se 27.4 1.8E+02 0.0062 21.2 14.9 103 23-132 112-223 (758)
382 3plx_B Aspartate 1-decarboxyla 26.4 79 0.0027 16.9 2.9 18 120-137 18-35 (102)
383 2z5e_A Proteasome assembling c 24.2 99 0.0034 17.1 4.2 31 7-37 13-43 (122)
384 3oug_A Aspartate 1-decarboxyla 24.0 97 0.0033 16.9 3.0 19 119-137 44-62 (114)
385 3mwp_A Nucleoprotein; structur 23.5 19 0.00066 24.8 0.3 16 29-44 162-177 (577)
386 3nvq_A Semaphorin-7A; beta-pro 23.0 2.2E+02 0.0075 20.6 6.5 55 26-80 382-444 (590)
387 1nr3_A MTH0916, DNA-binding pr 22.4 1E+02 0.0035 16.6 3.3 19 109-128 103-121 (122)
388 4gz8_A Semaphorin-3A; multi-do 22.4 2.4E+02 0.0081 20.8 6.0 55 26-80 431-495 (667)
389 1ukf_A Avirulence protein AVRP 22.3 89 0.003 18.8 2.8 32 14-45 118-152 (188)
390 3no0_A DNA gyrase subunit A; D 22.2 1.6E+02 0.0053 18.6 12.1 104 23-128 79-195 (276)
391 1ofz_A Fucose-specific lectin; 21.8 1.7E+02 0.006 19.0 8.5 71 55-125 166-239 (312)
392 2hrv_A 2A cysteine proteinase; 20.9 73 0.0025 18.2 2.2 19 113-131 119-137 (142)
393 1pqh_A Aspartate 1-decarboxyla 20.8 1.2E+02 0.0041 17.3 3.0 19 119-137 58-76 (143)
394 1z8r_A Coxsackievirus B4 polyp 20.5 1.1E+02 0.0037 18.0 2.9 19 113-131 139-157 (166)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=6.5e-27 Score=151.00 Aligned_cols=129 Identities=22% Similarity=0.316 Sum_probs=114.5
Q ss_pred CeeeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcE
Q psy11518 1 KYTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSI 78 (139)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 78 (139)
|+++.+++. +|...|.++.| +++++++++.|+.|++||+.+++.+..+..|...|.+++|+|+++++++++.|+.|
T Consensus 2 ~l~~~~~~~--~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 79 (304)
T 2ynn_A 2 KLDIKKTFS--NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (304)
T ss_dssp CCCCEEEEE--EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred cceeEEeec--CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEE
Confidence 456677776 56666666665 99999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
++||+.+++....+ ..|... |.+++|+|+++++++++.|+.|++||++++..+
T Consensus 80 ~vwd~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~ 132 (304)
T 2ynn_A 80 RVFNYNTGEKVVDF-EAHPDY-IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL 132 (304)
T ss_dssp EEEETTTCCEEEEE-ECCSSC-EEEEEECSSSSEEEEEETTSCEEEEEGGGTTEE
T ss_pred EEEECCCCcEEEEE-eCCCCc-EEEEEEcCCCCEEEEECCCCeEEEEECCCCcch
Confidence 99999999988887 566665 999999999999999999999999999887443
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.95 E-value=3.4e-26 Score=148.78 Aligned_cols=123 Identities=24% Similarity=0.374 Sum_probs=110.3
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
.+...+.++.| ++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++||++++...
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~ 241 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA 241 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEE
T ss_pred CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCccee
Confidence 44455666655 9999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..+ ..|... |.+++|+|++++|++++.|+.|++||+++++.+..+
T Consensus 242 ~~~-~~h~~~-v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 242 GTL-SGHASW-VLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp EEE-CCCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEE-cCCCCc-eEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEE
Confidence 777 455555 999999999999999999999999999999887664
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=3.7e-26 Score=149.98 Aligned_cols=131 Identities=17% Similarity=0.280 Sum_probs=110.2
Q ss_pred EEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCC-CEEEEecCCCcEEEEEe
Q psy11518 7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRV 83 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~ 83 (139)
.+...+|...|.++.| ++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++ .++++++.|+.|++||+
T Consensus 120 ~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~ 199 (344)
T 4gqb_B 120 KFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDT 199 (344)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred eccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccc
Confidence 3445578888888887 89999999999999999999999999999999999999999987 47899999999999999
Q ss_pred CCceEEEEEEeCCCCcceeEEEEccC-CcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 84 GSWQLEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
++++....+........+.+++|+|+ ++++++|+.|+.|++||+++++.+..+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~ 254 (344)
T 4gqb_B 200 RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA 254 (344)
T ss_dssp TSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE
T ss_pred cccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc
Confidence 99988877754445555899999994 5688999999999999999998877653
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=1.6e-26 Score=154.68 Aligned_cols=125 Identities=23% Similarity=0.409 Sum_probs=113.9
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
..+|..+|.++.| ++.++++|+.|+.|++||+.+++....+.+|...|.+++|+|+++++++|+.|+.|++||+.+++
T Consensus 104 l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~ 183 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE 183 (410)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC
T ss_pred ecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 4478888888887 78999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.+..+ ..|... |.+++|+|+++++++++.|+.|++||+++++.+..+
T Consensus 184 ~~~~~-~~h~~~-V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 184 CIRTM-HGHDHN-VSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp EEECC-CCCSSC-EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred eeEEE-cCCCCC-EEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 87777 455555 999999999999999999999999999999877654
No 5
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=1.8e-25 Score=144.38 Aligned_cols=128 Identities=26% Similarity=0.373 Sum_probs=115.5
Q ss_pred EEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
.+...+|...|.++.| ++++|++++.|+.|++|+..+++....+.+|...|.+++|+|+++++++++.|+.|++||++
T Consensus 16 ~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~ 95 (312)
T 4ery_A 16 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVS 95 (312)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECC
Confidence 4455578888888887 89999999999999999999999999999999999999999999999999999999999999
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+++....+ ..|... |.+++|+|+++++++++.|+.|++||+++++.+..+
T Consensus 96 ~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 145 (312)
T 4ery_A 96 SGKCLKTL-KGHSNY-VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTL 145 (312)
T ss_dssp TCCEEEEE-ECCSSC-EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCcEEEEE-cCCCCC-EEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEe
Confidence 99888877 455555 999999999999999999999999999998877654
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=1.9e-25 Score=146.08 Aligned_cols=127 Identities=23% Similarity=0.334 Sum_probs=111.8
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
..+|...|.++.+ +++++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||+++++
T Consensus 180 ~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQ 259 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCc
Confidence 3467777777776 88999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
....+........+.+++|+|+++++++|+.|+.|++||+.+++.+..+
T Consensus 260 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~ 308 (340)
T 1got_B 260 ELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL 308 (340)
T ss_dssp EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEe
Confidence 7777643333334999999999999999999999999999998876654
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.95 E-value=2.5e-25 Score=143.62 Aligned_cols=123 Identities=15% Similarity=0.190 Sum_probs=105.9
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
.|..++.++.| +++++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||++++...
T Consensus 53 ~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~ 132 (304)
T 2ynn_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL 132 (304)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEE
T ss_pred ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcch
Confidence 45666666665 8999999999999999999999999999999999999999999999999999999999999887444
Q ss_pred EEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 90 KLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
......|... |.+++|+| ++..+++++.|+.|++||+++++....
T Consensus 133 ~~~~~~h~~~-v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 178 (304)
T 2ynn_A 133 EQTFEGHEHF-VMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFT 178 (304)
T ss_dssp EEEECCCCSC-EEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEE
T ss_pred hhhhcccCCc-EEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccce
Confidence 3332555555 99999999 678999999999999999987765443
No 8
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.94 E-value=3.2e-25 Score=145.02 Aligned_cols=125 Identities=21% Similarity=0.334 Sum_probs=111.8
Q ss_pred eecceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 10 THSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 10 ~~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
..+|...+.++.| ++..+++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||++++..
T Consensus 139 ~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~ 218 (340)
T 1got_B 139 LAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMC 218 (340)
T ss_dssp EECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSE
T ss_pred ecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCee
Confidence 4467888888887 555689999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
...+ ..|... |.+++|+|+++++++++.|+.|++||+++++.+..+
T Consensus 219 ~~~~-~~h~~~-v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 264 (340)
T 1got_B 219 RQTF-TGHESD-INAICFFPNGNAFATGSDDATCRLFDLRADQELMTY 264 (340)
T ss_dssp EEEE-CCCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEE-cCCcCC-EEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 8777 455555 999999999999999999999999999998776554
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.94 E-value=3.2e-25 Score=145.55 Aligned_cols=121 Identities=16% Similarity=0.256 Sum_probs=105.3
Q ss_pred eeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeE----EEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 14 TASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGA----LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 14 ~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
...|.++.| ....+++|+.||.|++||+.+++.+.. +.+|...|.+++|+|++++|++|+.|+.|++||+.+++.
T Consensus 82 ~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~ 161 (344)
T 4gqb_B 82 EAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV 161 (344)
T ss_dssp SSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred CCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 456888888 456888999999999999998876544 347999999999999999999999999999999999999
Q ss_pred EEEEEeCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+..+ ..|... |.+++|+|++. ++++++.|+.|++||+++++....+
T Consensus 162 ~~~~-~~h~~~-V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 208 (344)
T 4gqb_B 162 LSSY-RAHAAQ-VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI 208 (344)
T ss_dssp EEEE-CCCSSC-EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC
T ss_pred EEEE-cCcCCc-eEEEEecCCCCCceeeeccccccccccccccceeeee
Confidence 8887 566655 99999999885 7889999999999999999877654
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.94 E-value=4.6e-25 Score=143.49 Aligned_cols=116 Identities=24% Similarity=0.451 Sum_probs=105.1
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
.+|..+|.++.| ++++|++|+.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.|+.|++||+.+++.
T Consensus 203 ~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 203 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTC 282 (321)
T ss_dssp CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE
T ss_pred cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEE
Confidence 356666666665 899999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
+..+ ..|... |.+++|+|++++|++++.|+.|++||..
T Consensus 283 ~~~~-~~h~~~-v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 283 VHTF-FDHQDQ-VWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEE-CCCSSC-EEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEE-cCCCCc-EEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 8887 456555 9999999999999999999999999963
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.94 E-value=5.4e-25 Score=144.07 Aligned_cols=120 Identities=23% Similarity=0.391 Sum_probs=106.0
Q ss_pred EEeecceeeEEEEec--------CCcEEEEeCCCCeEEEEEccCC-------ceeeEEEecCCCeEEEEECCCCCEEEEe
Q psy11518 8 FVTHSHTASVRSVAA--------TSKLAASSGADETVVLYDMVKR-------KQSGALMQHEGTITCLKFTPEGSHLISC 72 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~--------~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 72 (139)
....+|...|.++.+ ++++|++|+.|+.|++||+.+. .+...+.+|...|.+++|+|++.+++++
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~ 94 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISS 94 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEE
Confidence 345588889998865 7889999999999999998753 3456788999999999999999999999
Q ss_pred cCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 73 SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 73 ~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
+.|+.|++||+++++....+ ..|... |.+++|+|+++++++++.|+.|++||+..
T Consensus 95 s~D~~v~lwd~~~~~~~~~~-~~h~~~-v~~v~~sp~~~~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 95 SWDKTLRLWDLRTGTTYKRF-VGHQSE-VYSVAFSPDNRQILSAGAEREIKLWNILG 149 (343)
T ss_dssp ETTSEEEEEETTSSCEEEEE-ECCCSC-EEEEEECSSTTEEEEEETTSCEEEEESSS
T ss_pred cCCCcEEEEECCCCcEEEEE-cCCCCc-EEEEEECCCCCEEEEEcCCCEEEEEeccC
Confidence 99999999999999888877 556655 99999999999999999999999999974
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=2e-24 Score=142.08 Aligned_cols=130 Identities=23% Similarity=0.389 Sum_probs=110.2
Q ss_pred EEEEEeecceeeEEEEec----CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy11518 5 TQTFVTHSHTASVRSVAA----TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 5 ~~~~~~~~~~~~v~~~~~----~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
++.+. +|...+.++.+ +++.+++|+.|+.|++||+.+++++..+..|...|.+++|+|++.++++++.|+.|++
T Consensus 189 ~~~~~--~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~l 266 (354)
T 2pbi_B 189 LQSFH--GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRL 266 (354)
T ss_dssp EEEEE--CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEEEc--CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEE
Confidence 34444 56666666554 4689999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
||++.......+........+.+++|+|+++++++++.|+.|++||+.+++.+..+
T Consensus 267 wd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l 322 (354)
T 2pbi_B 267 YDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSIL 322 (354)
T ss_dssp EETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred EECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEE
Confidence 99998887766633333334889999999999999999999999999998876554
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=1.7e-24 Score=142.39 Aligned_cols=123 Identities=24% Similarity=0.353 Sum_probs=109.4
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC--CCCEEEEecCCCcEEEEEeCCce
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
+|...+.++.| ++..+++++.|++|++||+++++.+..+.+|...|.+++|+| +++++++++.|+.|++||+++++
T Consensus 152 ~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~ 231 (354)
T 2pbi_B 152 MHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQ 231 (354)
T ss_dssp ECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCC
T ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 56777777776 788999999999999999999999999999999999999987 56899999999999999999999
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
....+ ..|... |.+++|+|++.++++++.|+.|++||+++++.+..+
T Consensus 232 ~~~~~-~~h~~~-v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~ 278 (354)
T 2pbi_B 232 CVQAF-ETHESD-VNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIY 278 (354)
T ss_dssp EEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEe-cCCCCC-eEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 88777 455555 999999999999999999999999999988765543
No 14
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.94 E-value=4e-24 Score=138.02 Aligned_cols=124 Identities=26% Similarity=0.388 Sum_probs=111.7
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
.+|...+.++.| ++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||+++++.
T Consensus 62 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 141 (312)
T 4ery_A 62 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 141 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE
Confidence 467777777776 899999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
...+ ..|... +.+++|+|+++++++++.|+.|++||+++++.+..+
T Consensus 142 ~~~~-~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 187 (312)
T 4ery_A 142 LKTL-PAHSDP-VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTL 187 (312)
T ss_dssp EEEE-CCCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEe-cCCCCc-EEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEE
Confidence 8777 445444 999999999999999999999999999998876554
No 15
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=2.1e-24 Score=140.17 Aligned_cols=120 Identities=21% Similarity=0.341 Sum_probs=106.0
Q ss_pred EeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccC-----CceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy11518 9 VTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVK-----RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 9 ~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
...+|...|.++.+ ++++|++|+.|+.|++|++.. +.++..+.+|...|.+++|+|+++++++++.|+.|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 34588999998887 347999999999999999864 3456788899999999999999999999999999999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
||+.+++....+ ..|... |.+++|+|++.++++++.|+.|++||++..
T Consensus 92 wd~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~ 139 (319)
T 3frx_A 92 WDVATGETYQRF-VGHKSD-VMSVDIDKKASMIISGSRDKTIKVWTIKGQ 139 (319)
T ss_dssp EETTTTEEEEEE-ECCSSC-EEEEEECTTSCEEEEEETTSCEEEEETTSC
T ss_pred EECCCCCeeEEE-ccCCCc-EEEEEEcCCCCEEEEEeCCCeEEEEECCCC
Confidence 999999988887 566665 999999999999999999999999999753
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.94 E-value=2e-24 Score=141.57 Aligned_cols=127 Identities=20% Similarity=0.315 Sum_probs=101.8
Q ss_pred eeeEEEEEeeccee-eEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeE---EEecCCCeEEEEECCCCCEEEEecCC
Q psy11518 2 YTLTQTFVTHSHTA-SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGA---LMQHEGTITCLKFTPEGSHLISCSDD 75 (139)
Q Consensus 2 ~~~~~~~~~~~~~~-~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d 75 (139)
++.++++. +|.. .+.+++| ++++|++|+.|+.|++||+.++..... ..+|...|.+++|+|++++|++++.|
T Consensus 5 ~~~~~~~~--~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D 82 (345)
T 3fm0_A 5 LVLLGRVP--AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD 82 (345)
T ss_dssp EEEEEEEC--CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEeeeec--CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC
Confidence 34455555 5554 5555554 999999999999999999988764322 25799999999999999999999999
Q ss_pred CcEEEEEeCCceE--EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 76 GSIAIFRVGSWQL--EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 76 ~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
+.+++||...+.. ...+ ..|... |.+++|+|++++|++++.|+.|++||++++..
T Consensus 83 ~~v~iw~~~~~~~~~~~~~-~~h~~~-v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 83 ATTCIWKKNQDDFECVTTL-EGHENE-VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp SCEEEEEECCC-EEEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSCEEEEEECTTSC
T ss_pred CcEEEEEccCCCeEEEEEc-cCCCCC-ceEEEEeCCCCEEEEEECCCeEEEEECCCCCC
Confidence 9999999987653 3344 345544 99999999999999999999999999987643
No 17
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.94 E-value=5.8e-25 Score=147.11 Aligned_cols=124 Identities=27% Similarity=0.419 Sum_probs=112.7
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
.+|...|.++.| ++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||++++..
T Consensus 147 ~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~ 226 (410)
T 1vyh_C 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYC 226 (410)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCE
T ss_pred eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 467778888877 889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
...+ ..|... +.+++|+|++.++++++.|+.|++||+++++....+
T Consensus 227 ~~~~-~~h~~~-v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~ 272 (410)
T 1vyh_C 227 VKTF-TGHREW-VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAEL 272 (410)
T ss_dssp EEEE-ECCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred EEEE-eCCCcc-EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEe
Confidence 8887 556655 999999999999999999999999999998776554
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.93 E-value=9.4e-24 Score=137.08 Aligned_cols=126 Identities=24% Similarity=0.407 Sum_probs=106.0
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
..+|...|.++.+ ++.++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||++...
T Consensus 61 ~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~ 140 (319)
T 3frx_A 61 FKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQC 140 (319)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCE
T ss_pred EeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCe
Confidence 4467777777776 89999999999999999999999999999999999999999999999999999999999975321
Q ss_pred EE-----------------------------------------------EEEEeCCCCcceeEEEEccCCcEEEEEcCCC
Q psy11518 88 LE-----------------------------------------------KLFKKAHKGTAVNHISIHPSGKLALSVGKDK 120 (139)
Q Consensus 88 ~~-----------------------------------------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 120 (139)
.. ..+ ..|.. +|.+++|+|++++|++++.|+
T Consensus 141 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~h~~-~v~~~~~sp~g~~l~s~~~dg 218 (319)
T 3frx_A 141 LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF-IGHNS-NINTLTASPDGTLIASAGKDG 218 (319)
T ss_dssp EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE-CCCCS-CEEEEEECTTSSEEEEEETTC
T ss_pred EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee-cCCCC-cEEEEEEcCCCCEEEEEeCCC
Confidence 11 011 12333 489999999999999999999
Q ss_pred eEEEEEcCCCceeEEEe
Q psy11518 121 TLRTWNLVKGRSAYITN 137 (139)
Q Consensus 121 ~i~i~d~~~~~~~~~~~ 137 (139)
.|++||+++++.+..+.
T Consensus 219 ~i~iwd~~~~~~~~~~~ 235 (319)
T 3frx_A 219 EIMLWNLAAKKAMYTLS 235 (319)
T ss_dssp EEEEEETTTTEEEEEEE
T ss_pred eEEEEECCCCcEEEEec
Confidence 99999999988776653
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3e-24 Score=140.00 Aligned_cols=117 Identities=26% Similarity=0.408 Sum_probs=95.2
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccC-------CceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVK-------RKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
+|...|.++.| ++++|++|+.|+.|++||+.. .+.+..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWE 135 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 37788888876 899999999999999999853 345677889999999999999999999999999999999
Q ss_pred eCCc----eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 83 VGSW----QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 83 ~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
++.. +....+ ..|... |.+++|+|++.+|++++.|+.|++||++++
T Consensus 136 ~~~~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 136 TDESGEEYECISVL-QEHSQD-VKHVIWHPSEALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp CCTTCCCCEEEEEE-CCCSSC-EEEEEECSSSSEEEEEETTSCEEEEEEETT
T ss_pred ccCCCCCeEEEEEe-ccCCCc-eEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 9432 344444 455554 999999999999999999999999999776
No 20
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=2.2e-24 Score=142.43 Aligned_cols=120 Identities=18% Similarity=0.271 Sum_probs=102.3
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCC----eEEEEEccCCce----eeEEEecCCCeEEEEECCCCCEEEEecCCCcEE
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADE----TVVLYDMVKRKQ----SGALMQHEGTITCLKFTPEGSHLISCSDDGSIA 79 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~----~v~i~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 79 (139)
..+|...+.++.| ++..+++++.++ .++.|+...... ...+.+|...|++++|+|++++||+|+.|+.|+
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~ 294 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIA 294 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEE
Confidence 3456677777766 999999998776 688899876643 345678999999999999999999999999999
Q ss_pred EEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 80 IFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 80 ~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
+||+++++.+..+...|... |++++|+||+++|++++.|++|+|||+...
T Consensus 295 iwd~~~~~~~~~~~~gH~~~-V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 295 LVKLKDLSMSKIFKQAHSFA-ITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEETTTTEEEEEETTSSSSC-EEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EEECCCCcEEEEecCcccCC-EEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 99999999888774556655 999999999999999999999999999643
No 21
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=1.5e-24 Score=151.32 Aligned_cols=126 Identities=22% Similarity=0.370 Sum_probs=111.5
Q ss_pred ecceeeEEEEec--CCc-EEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 11 HSHTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
.+|...|.++.| ++. .|++|+.|+.|++||..+++....+.+|...|.+++|+|++++|++++.|+.|++||+.+++
T Consensus 144 ~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~ 223 (611)
T 1nr0_A 144 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT 223 (611)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc
Confidence 467778888887 555 69999999999999999988889999999999999999999999999999999999999998
Q ss_pred EEEEEEe------CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 88 LEKLFKK------AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 88 ~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
....+.. .|... |.+++|+|++++|++++.|+.|++||+++++.+..+.
T Consensus 224 ~~~~~~~~~~~~~~h~~~-V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 224 KTGVFEDDSLKNVAHSGS-VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp EEEECBCTTSSSCSSSSC-EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EeeeeccccccccccCCC-EEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 8777632 45554 9999999999999999999999999999988776553
No 22
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=5.5e-24 Score=141.72 Aligned_cols=125 Identities=22% Similarity=0.288 Sum_probs=110.7
Q ss_pred ecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCC-------ceeeEEEecCCCeEEEEECCCC-CEEEEecCCCcEE
Q psy11518 11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR-------KQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIA 79 (139)
Q Consensus 11 ~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~ 79 (139)
.+|...|.++.| ++++|++|+.|+.|++||+.++ +++..+.+|...|.+++|+|++ +++++++.|+.|+
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 157 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVIL 157 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEE
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEE
Confidence 467788888876 7889999999999999999887 6678899999999999999997 6999999999999
Q ss_pred EEEeCCceEEEEEE-eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 80 IFRVGSWQLEKLFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 80 ~~d~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+||+++++....+. ..|.. .|.+++|+|+++++++++.|+.|++||+++++.+..+
T Consensus 158 iwd~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPD-TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp EEETTTTEEEEEECTTTCCS-CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEECCCCCccEEEecCCCCC-ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeee
Confidence 99999998887774 33444 4999999999999999999999999999999887765
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.93 E-value=1e-24 Score=143.70 Aligned_cols=119 Identities=18% Similarity=0.192 Sum_probs=101.0
Q ss_pred ecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCC-CEEEEecCCCcEEEEEeCCc
Q psy11518 11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 11 ~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~ 86 (139)
..+...+.++.| ++.++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++ ++|++++.|+.|++||++++
T Consensus 223 ~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 223 CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC
T ss_pred ccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC
Confidence 345566777776 46789999999999999999999999999999999999999986 67899999999999999998
Q ss_pred eEEEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
+....+ .|... |.+++|+| ++.+|++++.|+.|++||+.+...
T Consensus 303 ~~~~~~--~H~~~-V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 303 EVFRDL--SHRDF-VTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EEEEEC--CCSSC-EEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred cEeEEC--CCCCC-EEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 877654 55555 99999998 789999999999999999976543
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.93 E-value=1.4e-23 Score=137.62 Aligned_cols=121 Identities=25% Similarity=0.382 Sum_probs=104.2
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCC--ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR--KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
.+|...|.++.| ++++|++|+.|+.+++|+...+ +.+..+.+|...|.+++|+|++++|++++.|+.|++||++.+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~ 137 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEE 137 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTT
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCC
Confidence 468888888887 8999999999999999998776 456788899999999999999999999999999999999876
Q ss_pred eE---EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 87 QL---EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 87 ~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
.. ...+ ..|... |.+++|+|++++|++++.|+.|++||+++++..
T Consensus 138 ~~~~~~~~~-~~h~~~-v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~ 185 (345)
T 3fm0_A 138 DEYECVSVL-NSHTQD-VKHVVWHPSQELLASASYDDTVKLYREEEDDWV 185 (345)
T ss_dssp SCEEEEEEE-CCCCSC-EEEEEECSSSSCEEEEETTSCEEEEEEETTEEE
T ss_pred CCeEEEEEe-cCcCCC-eEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE
Confidence 42 3333 345544 999999999999999999999999999887644
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=1.3e-23 Score=146.60 Aligned_cols=124 Identities=31% Similarity=0.515 Sum_probs=106.9
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE-------ecCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM-------QHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
..+|...|.++.| ++++|++|+.|+.|++||..+++.+..+. +|...|.+++|+|++++|++++.|+.|++
T Consensus 186 l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~l 265 (611)
T 1nr0_A 186 FGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKI 265 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred eccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 3467788888876 89999999999999999999998888774 79999999999999999999999999999
Q ss_pred EEeCCceEEEEEE------------------------------------------eCCCCcceeEEEEccCCcEEEEEcC
Q psy11518 81 FRVGSWQLEKLFK------------------------------------------KAHKGTAVNHISIHPSGKLALSVGK 118 (139)
Q Consensus 81 ~d~~~~~~~~~~~------------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~ 118 (139)
||+.+++....+. ..|.. .|.+++|+|++++|++++.
T Consensus 266 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~-~v~~l~~spdg~~l~s~s~ 344 (611)
T 1nr0_A 266 WNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNK-AITALSSSADGKTLFSADA 344 (611)
T ss_dssp EETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEET
T ss_pred EeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCC-CEEEEEEeCCCCEEEEEeC
Confidence 9998877654432 12333 4999999999999999999
Q ss_pred CCeEEEEEcCCCceeE
Q psy11518 119 DKTLRTWNLVKGRSAY 134 (139)
Q Consensus 119 d~~i~i~d~~~~~~~~ 134 (139)
|+.|++||+.+++...
T Consensus 345 D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 345 EGHINSWDISTGISNR 360 (611)
T ss_dssp TSCEEEEETTTCCEEE
T ss_pred CCcEEEEECCCCceee
Confidence 9999999999876543
No 26
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=4.1e-24 Score=137.53 Aligned_cols=120 Identities=21% Similarity=0.366 Sum_probs=101.7
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccC--CceeeEEEecCCCeEEEEECC--CCCEEEEecCCCcEEEEEe
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVK--RKQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~--~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~ 83 (139)
..+|...|.++.| ++++|++|+.|+.|++||+.. .+.+.++.+|...|.+++|+| ++++|++++.|+.|++||+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 4578888888776 899999999999999999975 367788999999999999986 3899999999999999999
Q ss_pred CCce--EEEEEEeCCCCcceeEEEEccC--CcEEEEEcCCCeEEEEEcCCCc
Q psy11518 84 GSWQ--LEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 84 ~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
.++. ....+ ..|... |.+++|+|+ +.++++++.|+.|++||++++.
T Consensus 85 ~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 85 ENGRWSQIAVH-AVHSAS-VNSVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp SSSCBCCCEEE-CCCSSC-EEEEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred CCCceEEEEEe-ecCCCc-eeEEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 8764 23333 334444 999999997 8899999999999999998763
No 27
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.92 E-value=8e-24 Score=137.17 Aligned_cols=122 Identities=17% Similarity=0.303 Sum_probs=105.0
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCC----ceeeEEEecCCCeEEEEECC--CCCEEEEecCCCcEEEEE
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR----KQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d 82 (139)
.+|...|.++.| ++++|++|+.|+.|++||+.++ +....+.+|...|.+++|+| +++++++++.|+.|++||
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 478888888887 8999999999999999999876 45677789999999999999 599999999999999999
Q ss_pred eCCc---------eEEEEEEeCCCCcceeEEEEccC--CcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 83 VGSW---------QLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 83 ~~~~---------~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
++.+ +....+ ..+... |.+++|+|+ ++++++++.|+.|++||+++++.+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 148 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTL-NDSKGS-LYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLR 148 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEE-CCCSSC-EEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTT
T ss_pred cCCCcccccccCcceeeee-cccCCc-eeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhc
Confidence 9876 444444 344544 999999999 9999999999999999999877543
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=1.4e-23 Score=144.82 Aligned_cols=119 Identities=28% Similarity=0.447 Sum_probs=105.3
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
++.+|...|.+++| +|++|++|+.|+.|++||. +++.+.++.+|...|++++|+|++++|++++.|+.|++||. ++
T Consensus 11 ~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~-~~ 88 (577)
T 2ymu_A 11 RLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NG 88 (577)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET-TS
T ss_pred EECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC-CC
Confidence 45688888888876 9999999999999999994 78889999999999999999999999999999999999996 56
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
+.+..+ ..|... |.+++|+|+++++++++.|+.+++|+.....
T Consensus 89 ~~~~~~-~~~~~~-v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~ 131 (577)
T 2ymu_A 89 QLLQTL-TGHSSS-VRGVAFSPDGQTIASASDDKTVKLWNRNGQL 131 (577)
T ss_dssp CEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTCCE
T ss_pred CEEEEE-ECCCCC-EEEEEECCCCCEEEEEcCCCceeecccccce
Confidence 666666 455554 9999999999999999999999999986543
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.92 E-value=9.8e-24 Score=139.88 Aligned_cols=126 Identities=23% Similarity=0.376 Sum_probs=108.5
Q ss_pred ecceeeEEEEec---CCcEEEEeCCCCeEEEEEcc-CCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMV-KRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 11 ~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
.+|...+.++.+ ++.++++|+.|+.|++||+. ..+.+..+.+|...|.+++|+|+++++++++.|+.|++||++++
T Consensus 202 ~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 202 SGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp SSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT
T ss_pred CCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC
Confidence 357777888776 78899999999999999997 45778889999999999999999999999999999999999999
Q ss_pred eEEEEEEeCCC-----CcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 87 QLEKLFKKAHK-----GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 87 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.....+..... ...+.+++|+|+++++++|+.||.|++||+.+++.+..+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 282 HQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp EEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEE
T ss_pred cEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEE
Confidence 88877733211 123789999999999999999999999999988876554
No 30
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=1e-23 Score=137.02 Aligned_cols=123 Identities=10% Similarity=0.118 Sum_probs=94.2
Q ss_pred EEEEEeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEEecCC---CeEEEEECCCCC-----------
Q psy11518 5 TQTFVTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALMQHEG---TITCLKFTPEGS----------- 67 (139)
Q Consensus 5 ~~~~~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~----------- 67 (139)
+..+..++....+.++++ ++.+|++++.|++|++||+++++.+.++.+|.. .+.+++|+|++.
T Consensus 171 ~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~ 250 (356)
T 2w18_A 171 KENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAK 250 (356)
T ss_dssp EEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-----
T ss_pred eeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCc
Confidence 344555556667777777 679999999999999999999999999986532 344445544333
Q ss_pred ----------------------------------------------EEEEecCCCcEEEEEeCCceEEEEEEeCCCCcce
Q psy11518 68 ----------------------------------------------HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV 101 (139)
Q Consensus 68 ----------------------------------------------~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v 101 (139)
.+++++.|++|++||+.+++....+ ..|....+
T Consensus 251 w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL-~gH~~~vv 329 (356)
T 2w18_A 251 ESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALL-PPVSDQHW 329 (356)
T ss_dssp -------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEE-CCC--CCC
T ss_pred ceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEe-cCCCCCeE
Confidence 3466778999999999999988887 45555435
Q ss_pred eEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 102 NHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 102 ~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
..++|+|||++|++|+.|++|+|||+.
T Consensus 330 s~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 330 SFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp CEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred EEEEECCCCCEEEEEECCCcEEEecCC
Confidence 568999999999999999999999963
No 31
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.92 E-value=5.7e-24 Score=141.02 Aligned_cols=121 Identities=19% Similarity=0.309 Sum_probs=103.1
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecC-------CCeEEEEECCCCCEEEEecCCCcEEEE
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHE-------GTITCLKFTPEGSHLISCSDDGSIAIF 81 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~~~~~d~~i~~~ 81 (139)
.+|...|.++.| ++++|++|+.|+.|++||+.+++.+..+..+. ..|++++|+|+++++++|+.||.|++|
T Consensus 246 ~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vw 325 (380)
T 3iz6_a 246 HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVW 325 (380)
T ss_dssp CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEE
T ss_pred CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEE
Confidence 467777777776 89999999999999999999998887776543 248899999999999999999999999
Q ss_pred EeCCceEEEEEE---eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 82 RVGSWQLEKLFK---KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 82 d~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
|+..++....+. ..|.. .|.+++|+|++++|++|+.|+.|++|++...+.
T Consensus 326 d~~~~~~~~~~~~~~~~h~~-~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 326 DTLLAEMVLNLGTLQNSHEG-RISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp ETTTCCEEEEECCSCSSCCC-CCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred ECCCCceEEEEecccCCCCC-ceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 999888776653 23444 499999999999999999999999999987654
No 32
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.92 E-value=4.6e-24 Score=138.38 Aligned_cols=120 Identities=20% Similarity=0.282 Sum_probs=98.8
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCc--eeeEEEecCCCeEEEEECC--CCCEEEEecCCCcEEEEEe
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~ 83 (139)
..+|...|.++.| ++++|++|+.|+.|++||+.+++ .+..+.+|...|.+++|+| ++++|++++.|+.|++||+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~ 88 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWRE 88 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECC
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEEC
Confidence 3478888888887 89999999999999999998874 4677899999999999986 4899999999999999999
Q ss_pred CCce--EEEEEEeCCCCcceeEEEEccC--CcEEEEEcCCCeEEEEEcCCCc
Q psy11518 84 GSWQ--LEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 84 ~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
+++. ....+ ..|... |.+++|+|+ +.++++++.|+.|++||++++.
T Consensus 89 ~~~~~~~~~~~-~~h~~~-V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~ 138 (316)
T 3bg1_A 89 ENGTWEKSHEH-AGHDSS-VNSVCWAPHDYGLILACGSSDGAISLLTYTGEG 138 (316)
T ss_dssp SSSCCCEEEEE-CCCSSC-CCEEEECCTTTCSCEEEECSSSCEEEEEECSSS
T ss_pred CCCcceEEEEc-cCCCCc-eEEEEECCCCCCcEEEEEcCCCCEEEEecCCCC
Confidence 8864 33333 345544 999999997 7899999999999999998763
No 33
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.92 E-value=2.7e-23 Score=135.88 Aligned_cols=125 Identities=18% Similarity=0.262 Sum_probs=109.0
Q ss_pred eecceeeEEEEec--C---CcEEEEeCCCCeEEEEEccC-Ccee-eEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 10 THSHTASVRSVAA--T---SKLAASSGADETVVLYDMVK-RKQS-GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~---~~~l~~~~~~~~v~i~~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
..+|...|.++.| + +++|++|+.|+.|++||+.+ +..+ ..+.+|...|.+++|+|+++++++++.|+.|++||
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEE
Confidence 3468888888887 4 58999999999999999987 5444 77889999999999999999999999999999999
Q ss_pred eCCceEEEEEEeCCCCcceeEEEE--ccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 83 VGSWQLEKLFKKAHKGTAVNHISI--HPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+.+++..... .|... |.+++| +|+++++++++.|+.|++||+++++.+..+.
T Consensus 115 ~~~~~~~~~~--~~~~~-v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 168 (368)
T 3mmy_A 115 LSSNQAIQIA--QHDAP-VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ 168 (368)
T ss_dssp TTTTEEEEEE--ECSSC-EEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE
T ss_pred cCCCCceeec--cccCc-eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe
Confidence 9999877654 34544 999999 8999999999999999999999998776654
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.92 E-value=4.3e-23 Score=137.31 Aligned_cols=118 Identities=25% Similarity=0.394 Sum_probs=105.5
Q ss_pred eEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.|.++.| ++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||+++++....+.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 3666665 89999999999999999999999999999999999999999999999999999999999999998877763
Q ss_pred eCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 94 KAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+... +.+++|+| +++++++++.|+.|++||+++++.+..+
T Consensus 205 --~~~~-v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~ 245 (393)
T 1erj_A 205 --IEDG-VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERL 245 (393)
T ss_dssp --CSSC-EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred --cCCC-cEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEee
Confidence 3333 89999999 8999999999999999999998776544
No 35
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.8e-23 Score=134.80 Aligned_cols=119 Identities=20% Similarity=0.280 Sum_probs=97.7
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCC----ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR----KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
..+|...|.++.| ++++|++|+.|+.|++||+... +.+..+.+|...|.+++|+|++++|++++.|+.|++||.
T Consensus 103 ~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 103 IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKD 182 (330)
T ss_dssp EC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEE
T ss_pred EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 3467888888876 8999999999999999999432 456778899999999999999999999999999999999
Q ss_pred CCc--eEEEEEEeCCCCcceeEEEEccC--CcEEEEEcCCCeEEEEEcCCC
Q psy11518 84 GSW--QLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 84 ~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~ 130 (139)
..+ +....+ ..|... |.+++|+|+ +..+++++.|+.|++||++++
T Consensus 183 ~~~~~~~~~~~-~~h~~~-v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 183 YDDDWECVAVL-NGHEGT-VWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp ETTEEEEEEEE-CCCSSC-EEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred CCCCeeEEEEc-cCCCCc-EEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 776 344444 455554 999999998 678999999999999998654
No 36
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.92 E-value=6.5e-23 Score=136.47 Aligned_cols=123 Identities=22% Similarity=0.409 Sum_probs=104.7
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCC------------------CeEEEEECCCCCEEEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEG------------------TITCLKFTPEGSHLIS 71 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~~ 71 (139)
+|...|.++.| ++++|++|+ ++.+++|++.+++.+..+..|.. .|.+++|+|+++++++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 57777777776 899999987 68999999999988877765432 3899999999999999
Q ss_pred ecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 72 CSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 72 ~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
++.|+.|++||+.+++....+ ..|... |.+++|+|+++++++++.|+.|++||+++++....+.
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~-~~h~~~-v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMIL-QGHEQD-IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EcCCCeEEEEECCCCcEEEEE-ccCCCC-EEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 999999999999999888777 556555 9999999999999999999999999999988766543
No 37
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.92 E-value=3.9e-24 Score=140.90 Aligned_cols=130 Identities=18% Similarity=0.292 Sum_probs=111.1
Q ss_pred EEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCC-EEEEecCCCcEEEEEeC
Q psy11518 8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVG 84 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~ 84 (139)
+...+|...|.++.| ++++|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++. ++++++.|+.|++||++
T Consensus 133 ~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~ 212 (357)
T 4g56_B 133 FAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTR 212 (357)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTT
T ss_pred eccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECC
Confidence 344567888888877 899999999999999999999999999999999999999999864 78999999999999999
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCC-cEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+++....+........+.+++|+|++ .++++|+.|+.|++||+++++.+..+.
T Consensus 213 ~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~ 266 (357)
T 4g56_B 213 KPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA 266 (357)
T ss_dssp SSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC
T ss_pred CCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEe
Confidence 88876665444444458999999974 688899999999999999988776553
No 38
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.92 E-value=1.2e-22 Score=133.00 Aligned_cols=120 Identities=21% Similarity=0.292 Sum_probs=100.7
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
...+|...|.++.+ ++.++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||+...
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE 150 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC
T ss_pred hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC
Confidence 34577788888876 8899999999999999999999999999999999999999999999999999999999999844
Q ss_pred eEEEEEEeCCCCcceeEEEEccCC----------cEEEEEcCCCeEEEEEcC
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSG----------KLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~----------~~l~~~~~d~~i~i~d~~ 128 (139)
..........+...+.+++|+|++ .++++++.|+.|++||..
T Consensus 151 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 202 (343)
T 2xzm_R 151 CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN 202 (343)
T ss_dssp EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT
T ss_pred ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC
Confidence 332222111233349999999987 789999999999999953
No 39
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4.6e-23 Score=134.86 Aligned_cols=125 Identities=18% Similarity=0.246 Sum_probs=113.5
Q ss_pred eEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy11518 4 LTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF 81 (139)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 81 (139)
..+.+...+|...|.++.| ++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++|
T Consensus 22 ~~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 22 HMKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLW 101 (369)
T ss_dssp SEEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEE
T ss_pred ccccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 4566777789999999887 89999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC-----CeEEEEEcCCCc
Q psy11518 82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGR 131 (139)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~ 131 (139)
|+.+++....+. +.. ++.+++|+|+++++++++.+ +.|.+||+++++
T Consensus 102 d~~~~~~~~~~~--~~~-~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 102 DVSNGQCVATWK--SPV-PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp ETTTCCEEEEEE--CSS-CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred ECCCCcEEEEee--cCC-CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 999999888874 333 39999999999999999998 999999998764
No 40
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=6.6e-23 Score=134.10 Aligned_cols=120 Identities=21% Similarity=0.342 Sum_probs=105.7
Q ss_pred ceeeEEEEec--C----CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCC
Q psy11518 13 HTASVRSVAA--T----SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 13 ~~~~v~~~~~--~----~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~ 85 (139)
+...+.++.| + +.++++|+.|+.|++||+.+++.+..+.+|...|.+++|+| +++++++++.|+.|++||+++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~ 147 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT 147 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec
Confidence 5566777776 5 67999999999999999999999999999999999999999 899999999999999999999
Q ss_pred ceEEEEEE--eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 86 WQLEKLFK--KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 86 ~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
++....+. ..+.. .|.+++|+|+++++++++.|+.|++||+++++.+
T Consensus 148 ~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 148 DTLVAIFGGVEGHRD-EVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp TEEEEEECSTTSCSS-CEEEEEECTTSSEEEEEETTSCEEEEESCSHHHH
T ss_pred CeEEEEecccccccC-ceeEEEECCCCCEEEEecCCCCEEEEECCCCccc
Confidence 98877763 23444 4999999999999999999999999999976543
No 41
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.91 E-value=7.4e-23 Score=145.95 Aligned_cols=127 Identities=21% Similarity=0.318 Sum_probs=112.3
Q ss_pred CeeeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcE
Q psy11518 1 KYTLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSI 78 (139)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 78 (139)
+++..+.+. +|...|.+++| +++++++++.+|.|++||+.+++.+..+.+|...|.+++|+|+++++++++.||.|
T Consensus 2 ~l~~~~~~~--~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 2 KLDIKKTFS--NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI 79 (814)
T ss_dssp CCCCEEEEE--EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE
T ss_pred Ccccceeee--cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeE
Confidence 355667776 45556666655 99999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
++||+.+++....+ ..|... |.+++|+|+++++++++.|+.|++||++++.
T Consensus 80 ~vw~~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~ 130 (814)
T 3mkq_A 80 RVFNYNTGEKVVDF-EAHPDY-IRSIAVHPTKPYVLSGSDDLTVKLWNWENNW 130 (814)
T ss_dssp EEEETTTCCEEEEE-ECCSSC-EEEEEECSSSSEEEEEETTSEEEEEEGGGTS
T ss_pred EEEECCCCcEEEEE-ecCCCC-EEEEEEeCCCCEEEEEcCCCEEEEEECCCCc
Confidence 99999999988887 455555 9999999999999999999999999998873
No 42
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.9e-23 Score=135.25 Aligned_cols=122 Identities=21% Similarity=0.369 Sum_probs=103.9
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEcc--CCceeeEEEecCCCeEEEEECCC--CCEEEEecCCCcEEEEEeC
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMV--KRKQSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~~ 84 (139)
.+|...|.++.| ++++|++|+.|+.|++||+. +.+.+..+.+|...|.+++|+++ ++++++++.|+.|++||+.
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 87 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 87 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEE
T ss_pred cCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcC
Confidence 467888888876 89999999999999999998 55677788899999999999976 8999999999999999999
Q ss_pred CceEEEEEEeCCCCcceeEEEEccC--CcEEEEEcCCCeEEEEEcCCCce
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
+++.........+...|.+++|+|+ +.++++++.|+.|++||++++..
T Consensus 88 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~ 137 (379)
T 3jrp_A 88 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT 137 (379)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC
T ss_pred CCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc
Confidence 9874333323333344999999999 99999999999999999998743
No 43
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.91 E-value=5.6e-23 Score=141.87 Aligned_cols=112 Identities=29% Similarity=0.504 Sum_probs=99.5
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
.+|...+.++.| ++++|++++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++.|+.|++||. +++.
T Consensus 464 ~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~ 541 (577)
T 2ymu_A 464 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL 541 (577)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCE
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCE
Confidence 356667776665 9999999999999999994 78888999999999999999999999999999999999995 5677
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEE
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWN 126 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 126 (139)
+..+ ..|... |.+++|+||+++|++++.|+.|++||
T Consensus 542 ~~~~-~~h~~~-v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 542 LQTL-TGHSSS-VWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEE-ECCSSC-EEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEE-cCCCCC-EEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 7776 566655 99999999999999999999999997
No 44
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.91 E-value=3e-23 Score=138.40 Aligned_cols=117 Identities=26% Similarity=0.309 Sum_probs=105.7
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCC
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG 98 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 98 (139)
.+.+++++|++|+.|+.|++||+.+++....+.+|...|.+++|+|+++++++++.|+.|++||+.+++....+ ..|..
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~-~~h~~ 182 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTL-IGHRA 182 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEE-ECCSS
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEE-cCCCC
Confidence 33458999999999999999999999888888899999999999999999999999999999999998887777 45555
Q ss_pred cceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 99 TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 99 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
. |.+++|+|+++++++++.|+.|++||+++++.+..+.
T Consensus 183 ~-v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 220 (420)
T 3vl1_A 183 T-VTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFN 220 (420)
T ss_dssp C-EEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred c-EEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEee
Confidence 5 9999999999999999999999999999998887664
No 45
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=1.4e-22 Score=143.05 Aligned_cols=120 Identities=19% Similarity=0.379 Sum_probs=105.9
Q ss_pred EeecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCC-----ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy11518 9 VTHSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR-----KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 9 ~~~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
...+|...|.++++ ++++|++|+.|+.|++|++.+. .....+.+|...|.+++|+|+++++++|+.|+.|++
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRL 456 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred hcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEE
Confidence 34589999999987 4579999999999999998753 345678899999999999999999999999999999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
||+.++.....+ ..|... |.+++|+|+++++++++.|+.|++||+...
T Consensus 457 wd~~~~~~~~~~-~~h~~~-v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~ 504 (694)
T 3dm0_A 457 WDLAAGVSTRRF-VGHTKD-VLSVAFSLDNRQIVSASRDRTIKLWNTLGE 504 (694)
T ss_dssp EETTTTEEEEEE-ECCSSC-EEEEEECTTSSCEEEEETTSCEEEECTTSC
T ss_pred EECCCCcceeEE-eCCCCC-EEEEEEeCCCCEEEEEeCCCEEEEEECCCC
Confidence 999999888877 566665 999999999999999999999999998654
No 46
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.91 E-value=3.4e-23 Score=138.11 Aligned_cols=126 Identities=16% Similarity=0.283 Sum_probs=109.1
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
.+|...|.++.| ++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||+++++.
T Consensus 136 ~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 136 QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 467888888887 889999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEEEEeC--CC--------------------CcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 89 EKLFKKA--HK--------------------GTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 89 ~~~~~~~--~~--------------------~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
...+... +. ..++.+++|+|+++++++++.||.|++||+++++.+..+
T Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 285 (420)
T 3vl1_A 216 IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQL 285 (420)
T ss_dssp EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEc
Confidence 8877421 11 122455667899999999999999999999998876654
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=4.3e-22 Score=128.96 Aligned_cols=128 Identities=22% Similarity=0.383 Sum_probs=110.6
Q ss_pred EEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
+...+|...+.++.| +++++++++.|+.|++||+.+++ ....+..|...+.+++|+|+++++++++.|+.|++||+
T Consensus 91 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 91 LDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp EECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred ccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeC
Confidence 333367777877776 88999999999999999998886 56677889999999999999999999999999999999
Q ss_pred CCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
++++....+ ..+... +.+++|+|+++++++++.|+.|++||+++++.+..+.
T Consensus 171 ~~~~~~~~~-~~~~~~-i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 222 (337)
T 1gxr_A 171 HNQTLVRQF-QGHTDG-ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD 222 (337)
T ss_dssp TTTEEEEEE-CCCSSC-EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCceeeee-ecccCc-eEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec
Confidence 999888877 445554 9999999999999999999999999999998876654
No 48
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.91 E-value=1.8e-22 Score=131.02 Aligned_cols=124 Identities=18% Similarity=0.299 Sum_probs=98.8
Q ss_pred EeecceeeEEEEec----CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 9 VTHSHTASVRSVAA----TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 9 ~~~~~~~~v~~~~~----~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
...+|...+.++.+ ...++++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||++
T Consensus 166 ~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~ 245 (340)
T 4aow_A 166 QDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLN 245 (340)
T ss_dssp CSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred EeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEec
Confidence 34456666666665 45678999999999999999999999999999999999999999999999999999999987
Q ss_pred CceEEEEEEe-----------------------------------------------CCCCcceeEEEEccCCcEEEEEc
Q psy11518 85 SWQLEKLFKK-----------------------------------------------AHKGTAVNHISIHPSGKLALSVG 117 (139)
Q Consensus 85 ~~~~~~~~~~-----------------------------------------------~~~~~~v~~~~~~~~~~~l~~~~ 117 (139)
+.+.+..+.. ..+...|.+++|+|++++|++|+
T Consensus 246 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 325 (340)
T 4aow_A 246 EGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY 325 (340)
T ss_dssp TTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE
T ss_pred cCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe
Confidence 7554332210 01122388899999999999999
Q ss_pred CCCeEEEEEcCCCce
Q psy11518 118 KDKTLRTWNLVKGRS 132 (139)
Q Consensus 118 ~d~~i~i~d~~~~~~ 132 (139)
.||.|++||+++|++
T Consensus 326 ~Dg~v~iW~~~tGtr 340 (340)
T 4aow_A 326 TDNLVRVWQVTIGTR 340 (340)
T ss_dssp TTSCEEEEEEEC---
T ss_pred CCCEEEEEeCCCcCC
Confidence 999999999998863
No 49
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.91 E-value=2.4e-22 Score=133.05 Aligned_cols=125 Identities=22% Similarity=0.279 Sum_probs=109.6
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEe---c---CCCeEEEEECCCCCEEEEecCC---CcEE
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQ---H---EGTITCLKFTPEGSHLISCSDD---GSIA 79 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l~~~~~d---~~i~ 79 (139)
..|...+.++.+ ++ .+++++.|+.|++||+.+++.+..+.. | ...|.+++|+|+++++++++.| +.|+
T Consensus 183 ~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 183 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT 261 (397)
T ss_dssp SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred cCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEE
Confidence 346666777766 77 999999999999999999999999998 8 9999999999999999999999 9999
Q ss_pred EEEeCCceEEEEEEeC------------CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 80 IFRVGSWQLEKLFKKA------------HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 80 ~~d~~~~~~~~~~~~~------------~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+||+++++....+... +... |.+++|+|++++|++++.|+.|++||+++++.+..+.
T Consensus 262 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 262 LYETEFGERIGSLSVPTHSSQASLGEFAHSSW-VMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEETTTCCEEEEECBC--------CCBSBSSC-EEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEECCCCcccceeccCcccccccccccccCCc-EEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 9999999888877321 4444 9999999999999999999999999999998887765
No 50
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.4e-22 Score=136.00 Aligned_cols=124 Identities=15% Similarity=0.266 Sum_probs=107.4
Q ss_pred ceeeEEEEe----cCCcEEEEeCCCCeEEEEEccCCceeeEEEe--cCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 13 HTASVRSVA----ATSKLAASSGADETVVLYDMVKRKQSGALMQ--HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 13 ~~~~v~~~~----~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
+...+.++. +++.++++++.|+.|++||+.+++.+..+.. |...|.+++|+|+++++++++.||.|++||++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence 445556655 2689999999999999999999999999988 8899999999999999999999999999999999
Q ss_pred eEEEEEEeCCCCcceeEEEEc----cCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 87 QLEKLFKKAHKGTAVNHISIH----PSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+....+...+... |.+++|+ |++.++++++.|+.|++||+++++.+..+.
T Consensus 247 ~~~~~~~~~~~~~-v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 247 VLIRSWSFGDHAP-ITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp EEEEEEBCTTCEE-EEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEE
T ss_pred cEEEEEecCCCCc-eEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEE
Confidence 9888875455554 9999665 468899999999999999999998776654
No 51
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.91 E-value=2.2e-22 Score=132.45 Aligned_cols=106 Identities=15% Similarity=0.272 Sum_probs=91.7
Q ss_pred cEEEE--eCCCCeEEEEEccCCc---------------e-eeEEEecCCCeEEEEECCCCCEEEEecCCCc-EEEEEeCC
Q psy11518 25 KLAAS--SGADETVVLYDMVKRK---------------Q-SGALMQHEGTITCLKFTPEGSHLISCSDDGS-IAIFRVGS 85 (139)
Q Consensus 25 ~~l~~--~~~~~~v~i~~~~~~~---------------~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~~~d~~~ 85 (139)
..++. |+.+|.|++||+.+++ + +..+.+|...|.+++|+|++++|++++.|+. |++||+++
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 44554 6899999999998765 2 6788899999999999999999999999998 99999999
Q ss_pred ceEEEEEEeC-CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 86 WQLEKLFKKA-HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 86 ~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
++.+..+... |... |.+++|+|++++|++++.|+.|++||++++.
T Consensus 228 ~~~~~~~~~g~h~~~-v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 228 GVLVREFRRGLDRAD-VVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp CCEEEEEECTTCCSC-EEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CcEEEEEEcCCCCCc-EEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9999888534 5544 9999999999999999999999999998764
No 52
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=2.3e-22 Score=131.98 Aligned_cols=120 Identities=13% Similarity=0.224 Sum_probs=105.2
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
|..+|.++.| +++++++++.|+.|++||+.+++ .+..+.+|...|.+++|+|+++++++++.|+.|++||+.+++.
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 86 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee
Confidence 5566666665 89999999999999999999887 8888999999999999999999999999999999999998886
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
........+...+.+++|+|+++++++++.|+.|++||++.++.
T Consensus 87 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~ 130 (372)
T 1k8k_C 87 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQEND 130 (372)
T ss_dssp EEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTT
T ss_pred eeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCc
Confidence 66554343444599999999999999999999999999988763
No 53
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.90 E-value=3e-22 Score=132.62 Aligned_cols=118 Identities=21% Similarity=0.286 Sum_probs=104.1
Q ss_pred eeeEEEEec--CCcEEEEeCCC---CeEEEEEccCCceeeEEEe-------------cCCCeEEEEECCCCCEEEEecCC
Q psy11518 14 TASVRSVAA--TSKLAASSGAD---ETVVLYDMVKRKQSGALMQ-------------HEGTITCLKFTPEGSHLISCSDD 75 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l~~~~~~---~~v~i~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~d 75 (139)
...+.++.| ++.+|++++.| +.|++||+.+++.+..+.. |...|.+++|+|+++++++++.|
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 312 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 312 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC
Confidence 667777776 89999999999 9999999999999999988 99999999999999999999999
Q ss_pred CcEEEEEeCCceEEEEEEe-----CC--------------CCcceeEEEEccCC----------cEEEEEcCCCeEEEEE
Q psy11518 76 GSIAIFRVGSWQLEKLFKK-----AH--------------KGTAVNHISIHPSG----------KLALSVGKDKTLRTWN 126 (139)
Q Consensus 76 ~~i~~~d~~~~~~~~~~~~-----~~--------------~~~~v~~~~~~~~~----------~~l~~~~~d~~i~i~d 126 (139)
+.|++||+++++....+.. .+ +..+|.+++|+|++ ++|++++.|+.|++||
T Consensus 313 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 313 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred CeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 9999999999998888841 33 03449999999998 7999999999999999
Q ss_pred cCCCc
Q psy11518 127 LVKGR 131 (139)
Q Consensus 127 ~~~~~ 131 (139)
+++++
T Consensus 393 ~~~g~ 397 (397)
T 1sq9_A 393 EAGGK 397 (397)
T ss_dssp EEC--
T ss_pred cCCCC
Confidence 98874
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.90 E-value=9.8e-23 Score=137.11 Aligned_cols=119 Identities=13% Similarity=0.160 Sum_probs=97.1
Q ss_pred cceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCcee--eEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCC
Q psy11518 12 SHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQS--GALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 12 ~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~ 85 (139)
+|...|+|++| ++.+|++|+.||.|++||+.+++.. ..+.+|.+.|++++|+| ++++|++++.|+.|++||+++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~ 196 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG 196 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC
Confidence 45667788877 5679999999999999999877544 34568999999999998 689999999999999999987
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
...............+.+++|+|+++++++|+.||.|++||++..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~ 241 (435)
T 4e54_B 197 NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK 241 (435)
T ss_dssp CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC
T ss_pred CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc
Confidence 655444422222333788999999999999999999999999753
No 55
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.90 E-value=2.1e-22 Score=129.57 Aligned_cols=120 Identities=20% Similarity=0.336 Sum_probs=100.7
Q ss_pred eecceeeEEEEec----CCcEEEEeCCCCeEEEEEccCCc--eeeEEEecCCCeEEEEECCC--CCEEEEecCCCcEEEE
Q psy11518 10 THSHTASVRSVAA----TSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAIF 81 (139)
Q Consensus 10 ~~~~~~~v~~~~~----~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~ 81 (139)
..+|...|.++.| ++++|++|+.|++|++||+.+++ .+..+..|...|.+++|+|+ +.++++++.|+.|++|
T Consensus 49 l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~w 128 (297)
T 2pm7_B 49 LTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVV 128 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEE
T ss_pred EccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEE
Confidence 3478888998887 27899999999999999998874 56677889999999999997 8899999999999999
Q ss_pred EeCCceE--EEEEEeCCCCcceeEEEEccC-------------CcEEEEEcCCCeEEEEEcCCCc
Q psy11518 82 RVGSWQL--EKLFKKAHKGTAVNHISIHPS-------------GKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 82 d~~~~~~--~~~~~~~~~~~~v~~~~~~~~-------------~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
|+++... ...+ ..|... |.+++|+|+ +++|++++.|+.|++||+++++
T Consensus 129 d~~~~~~~~~~~~-~~h~~~-v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 129 EFKENGTTSPIII-DAHAIG-VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp EBCSSSCBCCEEE-ECCSSC-EEEEEECCCC------------CCEEEEEETTSCEEEEEEETTT
T ss_pred EecCCCceeeeee-ecccCc-cceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCC
Confidence 9987532 2222 455555 999999997 5799999999999999998765
No 56
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.90 E-value=3.1e-22 Score=133.26 Aligned_cols=122 Identities=19% Similarity=0.284 Sum_probs=108.4
Q ss_pred ecceeeEEEEec--CC-cEEEEeCCCCeEEEEEccCCceeeEE--EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 11 HSHTASVRSVAA--TS-KLAASSGADETVVLYDMVKRKQSGAL--MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~-~~l~~~~~~~~v~i~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
.+|...|.++.| ++ .++++++.|+.|++||+.+++.+..+ ..|...|.+++|+|+++++++++.|+.|++||+++
T Consensus 128 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 128 EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 367777888877 65 69999999999999999999999998 78999999999999999999999999999999999
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEE---cCCCeEEEEEcCCCce
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSV---GKDKTLRTWNLVKGRS 132 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~---~~d~~i~i~d~~~~~~ 132 (139)
++....+...+....+.+++|+|++++++++ +.|+.|++||+++++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 208 GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 9988877455665558999999999999999 7999999999998654
No 57
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.90 E-value=3.1e-22 Score=135.12 Aligned_cols=132 Identities=14% Similarity=0.177 Sum_probs=112.5
Q ss_pred eEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceee----EEEecCCCeEEEEECCC---CCEEEEecC
Q psy11518 4 LTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG----ALMQHEGTITCLKFTPE---GSHLISCSD 74 (139)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~l~~~~~ 74 (139)
..+.+..+.+...+.++.| ++++|++|+.++.+.+|++.+++... .+.+|...|.+++|+|+ ++++++++.
T Consensus 139 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 218 (450)
T 2vdu_B 139 VLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR 218 (450)
T ss_dssp CEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET
T ss_pred eeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcC
Confidence 3445554456677777776 89999999999999999998876544 77889999999999999 999999999
Q ss_pred CCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 75 DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 75 d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
|+.|++||++++.....+...|... |.+++|+ ++++|++++.|+.|++||+++++.+..+.
T Consensus 219 d~~i~vwd~~~~~~~~~~~~~h~~~-v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 279 (450)
T 2vdu_B 219 DEHIKISHYPQCFIVDKWLFGHKHF-VSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFD 279 (450)
T ss_dssp TSCEEEEEESCTTCEEEECCCCSSC-EEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEE
T ss_pred CCcEEEEECCCCceeeeeecCCCCc-eEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeec
Confidence 9999999999988777753456555 9999999 99999999999999999999999887764
No 58
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=6e-23 Score=134.31 Aligned_cols=120 Identities=10% Similarity=0.094 Sum_probs=100.1
Q ss_pred cceeeEEEEec----CCcEEEEeCCCCeEEEEEccCCceeeEEE-ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 12 SHTASVRSVAA----TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 12 ~~~~~v~~~~~----~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
+|...|.++.+ +++++++++.|+.|++||+.+++...... .|...+.+++|+|++.++++|+.|+.|++||++++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 34456777765 67899999999999999999998876664 34557999999999999999999999999999998
Q ss_pred eEE-EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 87 QLE-KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 87 ~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
+.. ..+...|... |.+++|+|++.+|++++++ .|++||+++++.+
T Consensus 203 ~~~~~~~~~~h~~~-v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~ 248 (343)
T 3lrv_A 203 DQASSRFPVDEEAK-IKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGT 248 (343)
T ss_dssp TSCCEECCCCTTSC-EEEEEECTTSSEEEEEESS-BEEEEETTSSTTC
T ss_pred CCCccEEeccCCCC-EEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcc
Confidence 876 5563325554 9999999999999999955 9999999988764
No 59
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.90 E-value=5.9e-22 Score=128.36 Aligned_cols=125 Identities=23% Similarity=0.343 Sum_probs=101.0
Q ss_pred eecceeeEEEEec--C--CcEEEEeCCCCeEEEEEccCCce---------------------------------------
Q psy11518 10 THSHTASVRSVAA--T--SKLAASSGADETVVLYDMVKRKQ--------------------------------------- 46 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~--~~~l~~~~~~~~v~i~~~~~~~~--------------------------------------- 46 (139)
..+|...+.++.| + +.++++++.|+.|++||+.+++.
T Consensus 106 ~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 185 (351)
T 3f3f_A 106 LNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKL 185 (351)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEE
T ss_pred ecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEE
Confidence 3467777888877 5 88999999999999999865431
Q ss_pred ---------------------eeEEEecCCCeEEEEECCCC----CEEEEecCCCcEEEEEeCCc---------------
Q psy11518 47 ---------------------SGALMQHEGTITCLKFTPEG----SHLISCSDDGSIAIFRVGSW--------------- 86 (139)
Q Consensus 47 ---------------------~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~~~d~~~~--------------- 86 (139)
+..+.+|...|.+++|+|++ +++++++.||.|++||++.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 265 (351)
T 3f3f_A 186 AVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNM 265 (351)
T ss_dssp EEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------
T ss_pred EEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceec
Confidence 23344688999999999998 79999999999999999764
Q ss_pred -------------------------------eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 87 -------------------------------QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 87 -------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
+....+ ..|... |.+++|+|++++|++++.||.|++||+.+++....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~-v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 266 FDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEH-DDHNGE-VWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp -------------------------CCSEEEEEEEEE-CTTSSC-EEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEE
T ss_pred cCCCcccccccccccccccceeeeecccccccEEEEE-eccccc-EEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhh
Confidence 233333 344444 99999999999999999999999999999876654
Q ss_pred E
Q psy11518 136 T 136 (139)
Q Consensus 136 ~ 136 (139)
+
T Consensus 344 ~ 344 (351)
T 3f3f_A 344 M 344 (351)
T ss_dssp E
T ss_pred e
Confidence 4
No 60
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.90 E-value=6.5e-22 Score=139.70 Aligned_cols=127 Identities=19% Similarity=0.293 Sum_probs=107.0
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
...+|...|.++.+ ++++|++|+.|+.|++||+.+++....+.+|...|.+++|+|+++++++++.|+.|++||....
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~ 504 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGE 504 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCC
Confidence 34467777777776 8999999999999999999999999999999999999999999999999999999999998655
Q ss_pred eEEEEEE--eCCCCcceeEEEEccCC--cEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 87 QLEKLFK--KAHKGTAVNHISIHPSG--KLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 87 ~~~~~~~--~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
....... ..|.. .|.+++|+|++ ..+++++.|+.|++||+++++....+
T Consensus 505 ~~~~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~ 557 (694)
T 3dm0_A 505 CKYTISEGGEGHRD-WVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTL 557 (694)
T ss_dssp EEEEECSSTTSCSS-CEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred cceeeccCCCCCCC-cEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEE
Confidence 4433321 12333 39999999987 58999999999999999988776554
No 61
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.90 E-value=7.1e-22 Score=131.34 Aligned_cols=129 Identities=13% Similarity=0.281 Sum_probs=103.8
Q ss_pred EEEEeecceeeEEEEec--CCc-EEEEeCCCCeEEEEEc----cCCc------eeeEEEe----------cCCCeEEEEE
Q psy11518 6 QTFVTHSHTASVRSVAA--TSK-LAASSGADETVVLYDM----VKRK------QSGALMQ----------HEGTITCLKF 62 (139)
Q Consensus 6 ~~~~~~~~~~~v~~~~~--~~~-~l~~~~~~~~v~i~~~----~~~~------~~~~~~~----------~~~~v~~~~~ 62 (139)
+.+..+.|...|.++.| +++ +|++|+.|+.|++|++ .+++ ....+.. |...|.+++|
T Consensus 37 ~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 116 (425)
T 1r5m_A 37 KILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAW 116 (425)
T ss_dssp EECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEE
T ss_pred hheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEE
Confidence 44555566677777776 788 9999999999999999 8887 4555544 6779999999
Q ss_pred CCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 63 TPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 63 ~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+|++++|++++.|+.|++|| .++.....+ ..|... |.+++|+|+++++++++.|+.|++||+++++.+..+.
T Consensus 117 s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 117 SHDGNSIVTGVENGELRLWN-KTGALLNVL-NFHRAP-IVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp CTTSSEEEEEETTSCEEEEE-TTSCEEEEE-CCCCSC-EEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred cCCCCEEEEEeCCCeEEEEe-CCCCeeeec-cCCCcc-EEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee
Confidence 99999999999999999999 566666666 445544 9999999999999999999999999999998877654
No 62
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.90 E-value=1.1e-21 Score=129.72 Aligned_cols=119 Identities=13% Similarity=0.183 Sum_probs=103.0
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCC-EEEEecCCCcEEEEEeCC----
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGS---- 85 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~---- 85 (139)
+...+.++.+ +++++++++.|+.|++||+ +++++..+..|...|.+++|+|+++ ++++++.|+.|++||+++
T Consensus 162 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 240 (383)
T 3ei3_B 162 WDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK 240 (383)
T ss_dssp SSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST
T ss_pred CCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc
Confidence 3455666665 8999999999999999998 6778889999999999999999998 899999999999999987
Q ss_pred ceEEEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
+.....+ .+... +.+++|+| +++++++++.|+.|++||+++++.+..
T Consensus 241 ~~~~~~~--~~~~~-v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 241 NSYIAEM--PHEKP-VNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp TCEEEEE--ECSSC-EEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSE
T ss_pred cceEEEe--cCCCc-eEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccc
Confidence 5566655 34444 99999999 999999999999999999998776544
No 63
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.90 E-value=9.2e-22 Score=132.89 Aligned_cols=122 Identities=24% Similarity=0.399 Sum_probs=107.6
Q ss_pred Eeecceee-EEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 9 VTHSHTAS-VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 9 ~~~~~~~~-v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
...+|... +.++.++++++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++ .+++++.||.|++||+++++
T Consensus 116 ~l~~h~~~v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~ 194 (464)
T 3v7d_B 116 TLRGHMTSVITCLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC 194 (464)
T ss_dssp EEECCSSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTE
T ss_pred EEcCCCCCcEEEEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc
Confidence 34467665 56788899999999999999999999999999999999999999999987 89999999999999999999
Q ss_pred EEEEEEeCCCCcceeEEEEc--cCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 88 LEKLFKKAHKGTAVNHISIH--PSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
....+ ..|... |.+++|+ ++++++++++.|+.|++||+++++..
T Consensus 195 ~~~~~-~~h~~~-v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 240 (464)
T 3v7d_B 195 CTHVF-EGHNST-VRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSV 240 (464)
T ss_dssp EEEEE-CCCSSC-EEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC
T ss_pred EEEEE-CCCCCc-cEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCccc
Confidence 88877 455555 9999998 57899999999999999999987654
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.90 E-value=1.3e-21 Score=126.67 Aligned_cols=130 Identities=18% Similarity=0.281 Sum_probs=104.0
Q ss_pred EEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCce---eeEEE--ecCCCeEEEEECCCCCEEEEecCCCcEE
Q psy11518 7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ---SGALM--QHEGTITCLKFTPEGSHLISCSDDGSIA 79 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~---~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 79 (139)
.+...+|...+.++.+ +++++++++ |+.|++||+.+++. ...+. .|...|.+++|+|+++++++++.|+.|+
T Consensus 44 ~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 122 (337)
T 1gxr_A 44 QINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS 122 (337)
T ss_dssp EEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEE
T ss_pred cceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence 3344467777877776 899999999 99999999987653 33444 6889999999999999999999999999
Q ss_pred EEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 80 IFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 80 ~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+||+.+++.........+...+.+++|+|+++++++++.|+.|++||+++++.+..+.
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~ 180 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQ 180 (337)
T ss_dssp EEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeee
Confidence 9999987743332223333349999999999999999999999999999988776553
No 65
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.90 E-value=1e-21 Score=145.49 Aligned_cols=127 Identities=22% Similarity=0.356 Sum_probs=113.7
Q ss_pred EEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
+...+|...|.++.| +++++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||+.+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 345578888888776 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEEeCCCCcceeEEEEcc--CCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHP--SGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
++....+ ..|... |.+++|+| ++.++++++.|+.|++||+++++.+..+
T Consensus 689 ~~~~~~~-~~~~~~-v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~ 739 (1249)
T 3sfz_A 689 GKLVHTY-DEHSEQ-VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTM 739 (1249)
T ss_dssp CCEEEEE-ECCSSC-EEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEE
T ss_pred CceEEEE-cCCCCc-EEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhee
Confidence 9988887 455555 99999999 5568999999999999999999877654
No 66
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1e-22 Score=140.00 Aligned_cols=126 Identities=11% Similarity=0.042 Sum_probs=103.0
Q ss_pred eecceeeEEEEec-CCcEEEEeCCCCeEEEEEccCC-ceeeEEEecCCCeEEE--EECCCC-CEEEEecCCCcEEEEEeC
Q psy11518 10 THSHTASVRSVAA-TSKLAASSGADETVVLYDMVKR-KQSGALMQHEGTITCL--KFTPEG-SHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 10 ~~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~-~~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~~~d~~ 84 (139)
..+|...|.++.| .+..|++|+.||+|++||+.++ .+...+.+|...|.++ .|+|++ .+|++++.|+.|++||++
T Consensus 262 l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~ 341 (524)
T 2j04_B 262 LSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPK 341 (524)
T ss_dssp ECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGG
T ss_pred EEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECC
Confidence 3467788999998 5568999999999999999876 4456688999999999 568887 899999999999999998
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
+++....+........+.+++|+|+++.+++++.|+.|++||++++..+..
T Consensus 342 ~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~ 392 (524)
T 2j04_B 342 DIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHP 392 (524)
T ss_dssp GHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEE
T ss_pred CCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECccccccee
Confidence 876554442112222378899999999999999999999999999876443
No 67
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.1e-21 Score=126.09 Aligned_cols=119 Identities=22% Similarity=0.349 Sum_probs=102.7
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 90 (139)
+...+.++.+ ++. +++++.|+.|++||+.+++.+..+..|...|.+++|+|++ .+++++.|+.|++||+.+++...
T Consensus 183 ~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQ 260 (313)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEE
T ss_pred CcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeE
Confidence 5666777776 666 9999999999999999999999999999999999999998 68899999999999999999888
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.+ ..+... +.+++|+|+++ +++++.|+.|++||+++++.+...
T Consensus 261 ~~-~~~~~~-i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 261 VI-TLPAIS-IWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp EE-ECSSSC-EEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC--
T ss_pred EE-eccCce-EEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeehh
Confidence 87 444444 99999999998 667899999999999988766543
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.90 E-value=1.1e-21 Score=129.72 Aligned_cols=125 Identities=14% Similarity=0.150 Sum_probs=102.4
Q ss_pred ecceeeEEEEec--CC-cEEEEeCCCCeEEEEEccCCceeeEEE--ecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeC
Q psy11518 11 HSHTASVRSVAA--TS-KLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~-~~l~~~~~~~~v~i~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~ 84 (139)
.+|...|.++.| ++ +++++|+.|+.|++||+.+++....+. +|...|.+++|+| +++++++++.|+.|++||++
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 149 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFS 149 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETT
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECC
Confidence 467788888887 66 899999999999999999888777765 6999999999999 78999999999999999998
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
................+.+++|+|+++++++++.|+.|++||++ ++.+..+
T Consensus 150 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~ 200 (383)
T 3ei3_B 150 GSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKE 200 (383)
T ss_dssp SCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEE
T ss_pred CCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEe
Confidence 64433333222223449999999999999999999999999994 5555443
No 69
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.89 E-value=6.9e-23 Score=135.03 Aligned_cols=122 Identities=15% Similarity=0.132 Sum_probs=99.7
Q ss_pred EEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCc---eeeEEEe-cCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy11518 8 FVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK---QSGALMQ-HEGTITCLKFTPEGSHLISCSDDGSIAIF 81 (139)
Q Consensus 8 ~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 81 (139)
....+|...+.++.| ++++|++++.|+.|++||+.+++ ....+.. |...|.+++|+|+++++++++.|+.|++|
T Consensus 94 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iw 173 (377)
T 3dwl_C 94 LVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVL 173 (377)
T ss_dssp EECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEE
T ss_pred eEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEE
Confidence 344567788888887 88999999999999999998886 3677777 99999999999999999999999999999
Q ss_pred EeCC------------------ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 82 RVGS------------------WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 82 d~~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
|+.. ++....+ .|... |.+++|+|+++++++++.|+.|++||+++++.
T Consensus 174 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 174 SAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGW-VHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSS-EEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred EEEecccCCCccccccccccchhhhhhcc--cCCce-EEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 9852 3333333 44444 99999999999999999999999999998876
No 70
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.89 E-value=1.2e-21 Score=128.04 Aligned_cols=131 Identities=22% Similarity=0.308 Sum_probs=108.3
Q ss_pred eeEEEEEeecceeeEEEEecC------CcEEEEeCCCCeEEEEEccCCceeeEEEe-----cCCCeEEEEECCC----CC
Q psy11518 3 TLTQTFVTHSHTASVRSVAAT------SKLAASSGADETVVLYDMVKRKQSGALMQ-----HEGTITCLKFTPE----GS 67 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~------~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~ 67 (139)
+..+.+. .+|...|.++.|. ...+++++.++.|++||+.+++.+..+.. |...|.+++|+|+ ++
T Consensus 8 ~~~~~~~-~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 86 (366)
T 3k26_A 8 KCVNSLK-EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHP 86 (366)
T ss_dssp EEEEEEE-CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCE
T ss_pred EEEEEee-cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCC
Confidence 3333433 3788999998884 45677777778999999998877776664 4577999999998 67
Q ss_pred EEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 68 HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 68 ~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
++++++.||.|++||+.+++....+ ..|... |.+++|+| +++++++++.|+.|++||+++++.+..+
T Consensus 87 ~l~~~~~dg~i~v~d~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 87 LLAVAGSRGIIRIINPITMQCIKHY-VGHGNA-INELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp EEEEEETTCEEEEECTTTCCEEEEE-ESCCSC-EEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEecCCCEEEEEEchhceEeeee-cCCCCc-EEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 9999999999999999999988887 455555 99999999 9999999999999999999998887665
No 71
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.89 E-value=2.9e-21 Score=128.70 Aligned_cols=125 Identities=21% Similarity=0.295 Sum_probs=109.0
Q ss_pred ecceeeEEEEecCCcEEEEeCCCCeEEEEEcc-CCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 11 HSHTASVRSVAATSKLAASSGADETVVLYDMV-KRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 11 ~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
.+|...+.++.|+++.+++++.|+.|++||+. ....+..+.+|...|.+++|+|+++++++++.|+.|++||++++...
T Consensus 173 ~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 252 (401)
T 4aez_A 173 AGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPK 252 (401)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEE
T ss_pred cCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCcc
Confidence 37888999999999999999999999999998 46677888999999999999999999999999999999999998888
Q ss_pred EEEEeCCCCcceeEEEEccCCc-EEEEEc--CCCeEEEEEcCCCceeEEEe
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGK-LALSVG--KDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~ 137 (139)
..+ ..+... |.+++|+|++. ++++++ .|+.|++||+++++.+..+.
T Consensus 253 ~~~-~~~~~~-v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~ 301 (401)
T 4aez_A 253 FTK-TNHNAA-VKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD 301 (401)
T ss_dssp EEE-CCCSSC-CCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE
T ss_pred EEe-cCCcce-EEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe
Confidence 777 445544 99999999765 556654 79999999999998877654
No 72
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.89 E-value=4.1e-21 Score=124.70 Aligned_cols=122 Identities=19% Similarity=0.352 Sum_probs=104.6
Q ss_pred eecceeeEEEEec--C-CcEEEEeCCCCeEEEEEccCCc-----eeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy11518 10 THSHTASVRSVAA--T-SKLAASSGADETVVLYDMVKRK-----QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF 81 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~-~~~l~~~~~~~~v~i~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 81 (139)
+.+|...|.+++| + +++|++|+.|++|++||+.+.+ +...+.+|...|.+++|+|+++++++++.|+.|++|
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 4589999999987 3 6799999999999999987653 456778899999999999999999999999999999
Q ss_pred EeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
+.......... ..+... +....++++++++++++.|+.+++||+......
T Consensus 114 ~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~ 163 (340)
T 4aow_A 114 DLTTGTTTRRF-VGHTKD-VLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKY 163 (340)
T ss_dssp ETTTTEEEEEE-ECCSSC-EEEEEECTTSSCEEEEETTSCEEEECTTSCEEE
T ss_pred eecccceeeee-cCCCCc-eeEEEEeecCccceeecCCCeEEEEEeCCCceE
Confidence 99988877766 334443 788999999999999999999999999765443
No 73
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.89 E-value=4.8e-23 Score=135.80 Aligned_cols=116 Identities=12% Similarity=0.233 Sum_probs=92.1
Q ss_pred eeeEEEEe--cCCcEEEEeCCCCeEEEEEccCC--ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce--
Q psy11518 14 TASVRSVA--ATSKLAASSGADETVVLYDMVKR--KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ-- 87 (139)
Q Consensus 14 ~~~v~~~~--~~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-- 87 (139)
..+|.++. +++++|++|+.|+.|++||+.++ +.+..+.+|...|.+++|+|++++|++++.|+.|++||+.++.
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW 90 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CC
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce
Confidence 34455555 48999999999999999999988 7788889999999999999999999999999999999998876
Q ss_pred -EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 88 -LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 88 -~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
....+ ..|... |.+++|+|+++++++++.|+.|++||+++++
T Consensus 91 ~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~ 133 (377)
T 3dwl_C 91 KQTLVL-LRLNRA-ATFVRWSPNEDKFAVGSGARVISVCYFEQEN 133 (377)
T ss_dssp CCEEEC-CCCSSC-EEEEECCTTSSCCEEEESSSCEEECCC----
T ss_pred eeeeEe-cccCCc-eEEEEECCCCCEEEEEecCCeEEEEEECCcc
Confidence 33333 344444 9999999999999999999999999999876
No 74
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.89 E-value=2.8e-21 Score=130.56 Aligned_cols=123 Identities=24% Similarity=0.343 Sum_probs=111.2
Q ss_pred eecceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 10 THSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 10 ~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
..+|...+.++.++++++++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.|+.|++||+++++..
T Consensus 266 ~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 266 LRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELM 345 (464)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred ccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEE
Confidence 44678889999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..+ ..|... |.+++|+ +.++++++.||.|++||+++++.....
T Consensus 346 ~~~-~~h~~~-v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~ 388 (464)
T 3v7d_B 346 YTL-QGHTAL-VGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY 388 (464)
T ss_dssp EEE-CCCSSC-EEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEE-eCCCCc-EEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee
Confidence 887 455555 9999997 589999999999999999998766554
No 75
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.1e-21 Score=127.47 Aligned_cols=123 Identities=20% Similarity=0.319 Sum_probs=103.9
Q ss_pred EeecceeeEEEEec--C--CcEEEEeCCCCeEEEEEccCCc--eeeEEEecCCCeEEEEECCC--CCEEEEecCCCcEEE
Q psy11518 9 VTHSHTASVRSVAA--T--SKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAI 80 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~--~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~ 80 (139)
...+|...|.++.| + +.+|++++.|+.|++||+.+++ .+..+..|...|.+++|+|+ +.++++++.|+.|++
T Consensus 50 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v 129 (379)
T 3jrp_A 50 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 129 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred EecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEE
Confidence 34468888888887 3 8999999999999999999987 67778889999999999998 999999999999999
Q ss_pred EEeCCceEEEEEE-eCCCCcceeEEEEcc-------------CCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 81 FRVGSWQLEKLFK-KAHKGTAVNHISIHP-------------SGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 81 ~d~~~~~~~~~~~-~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
||++......... ..+... |.+++|+| ++.++++++.|+.|++||+++++.
T Consensus 130 ~d~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 194 (379)
T 3jrp_A 130 VEFKENGTTSPIIIDAHAIG-VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQ 194 (379)
T ss_dssp EECCTTSCCCEEEEECCTTC-EEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTT
T ss_pred EecCCCCceeeEEecCCCCc-eEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCc
Confidence 9998874322222 344444 99999999 699999999999999999987754
No 76
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.89 E-value=3.5e-21 Score=126.35 Aligned_cols=129 Identities=17% Similarity=0.100 Sum_probs=106.8
Q ss_pred EEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCce---eeEE-EecCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy11518 7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQ---SGAL-MQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~---~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
.+...+|...+.++.| +++++++++.|+.|++||+..+.. ...+ ..|...|.+++|+|+++++++++.|+.|++
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 168 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 168 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence 4444567777887776 899999999999999999988763 2233 467889999999999999999999999999
Q ss_pred EEeC------------------CceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 81 FRVG------------------SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 81 ~d~~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
||++ .+.....+ ..+... +.+++|+|+++++++++.|+.|++||+++++.+..+.
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 169 FSAYIKEVEERPAPTPWGSKMPFGELMFES-SSSCGW-VHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp EECCCTTTSCCCCCBTTBSCCCTTCEEEEC-CCCSSC-EEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred EEcccccccccccccccccccchhhheEec-CCCCCe-EEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 9953 56666666 344444 9999999999999999999999999999998876654
No 77
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=7.9e-22 Score=140.54 Aligned_cols=122 Identities=21% Similarity=0.366 Sum_probs=103.4
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEcc--CCceeeEEEecCCCeEEEEECCC--CCEEEEecCCCcEEEEEe
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMV--KRKQSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~~d~ 83 (139)
..+|...|.++.| +++++++|+.||.|++||+. +++.+..+.+|...|.+++|+|+ ++++++++.||.|++||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 3578899999987 89999999999999999998 45677888899999999999987 999999999999999999
Q ss_pred CCceEEEEEEeCCCCcceeEEEEccC--CcEEEEEcCCCeEEEEEcCCCc
Q psy11518 84 GSWQLEKLFKKAHKGTAVNHISIHPS--GKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
.++..........+..+|.+++|+|+ ++.+++++.||.|++||++++.
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 134 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC
Confidence 98874333323333344999999999 9999999999999999998874
No 78
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.1e-21 Score=142.10 Aligned_cols=122 Identities=16% Similarity=0.144 Sum_probs=101.5
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCc--------------------------------------------
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK-------------------------------------------- 45 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~-------------------------------------------- 45 (139)
+|...|.+++| ++++||+|+.|++|++|++.+++
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 56667777776 99999999999999999997662
Q ss_pred -eeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEe-----CCCCcceeEEEEc-----cCC---c
Q psy11518 46 -QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK-----AHKGTAVNHISIH-----PSG---K 111 (139)
Q Consensus 46 -~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~-----~~~~~~v~~~~~~-----~~~---~ 111 (139)
++..+.+|.+.|++++|+|+| +||+|+.|+.|++||+++...+..... .|.. .|++++|+ ||| +
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~-~V~sv~Fs~~~~~~Dg~~~~ 643 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSA-CVTCIEFVIMEYGDDGYSSI 643 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCC-CEEEEEEEEEECTTSSSEEE
T ss_pred ceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhcccccc-ceEEEEEEEEecCCCCCcce
Confidence 356778899999999999999 999999999999999988776543221 3333 49999999 885 8
Q ss_pred EEEEEcCCCeEEEEEc---CCCceeEE
Q psy11518 112 LALSVGKDKTLRTWNL---VKGRSAYI 135 (139)
Q Consensus 112 ~l~~~~~d~~i~i~d~---~~~~~~~~ 135 (139)
+|++|+.|+.|++||+ .+|+....
T Consensus 644 ~l~sgs~D~tv~~wd~~p~~~g~~~~~ 670 (902)
T 2oaj_A 644 LMVCGTDMGEVITYKILPASGGKFDVQ 670 (902)
T ss_dssp EEEEEETTSEEEEEEEEECGGGCEEEE
T ss_pred EEEEEecCCcEEEEEEecCCCCcEEEE
Confidence 9999999999999999 67665543
No 79
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.89 E-value=6e-22 Score=137.25 Aligned_cols=118 Identities=22% Similarity=0.351 Sum_probs=103.9
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEe-cCCCeEEEEECC----------CCCEEEEecCC
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQ-HEGTITCLKFTP----------EGSHLISCSDD 75 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-~~~~v~~~~~~~----------~~~~l~~~~~d 75 (139)
...+|...+.++.+ ++++|++++.|+.|++||+.+++.+..+.+ |...|++++|+| ++++|++++.|
T Consensus 483 ~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d 562 (615)
T 1pgu_A 483 LKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD 562 (615)
T ss_dssp CSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT
T ss_pred ccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCC
Confidence 34456777877776 999999999999999999999999888887 999999999999 99999999999
Q ss_pred CcEEEEEeCCc-eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 76 GSIAIFRVGSW-QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 76 ~~i~~~d~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
+.|++||+.++ +....+ ..|... |.+++|+|+++ |++++.|+.|++||+..
T Consensus 563 g~i~iw~~~~~~~~~~~~-~~h~~~-v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 563 TNIFIYSVKRPMKIIKAL-NAHKDG-VNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp SCEEEEESSCTTCCEEET-TSSTTC-EEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred CcEEEEECCCCceechhh-hcCccc-eEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 99999999987 566555 455554 99999999999 99999999999999975
No 80
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.89 E-value=4.7e-21 Score=141.93 Aligned_cols=126 Identities=23% Similarity=0.339 Sum_probs=112.3
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECC--CCCEEEEecCCCcEEEEEeCC
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTP--EGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~ 85 (139)
..+|...|.++.| +++++++++.|+.|++||+.+++.+..+.+|...|.+++|+| ++.++++++.|+.|++||+.+
T Consensus 653 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~ 732 (1249)
T 3sfz_A 653 IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ 732 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS
T ss_pred eccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC
Confidence 3467778888777 899999999999999999999999999999999999999999 566899999999999999999
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
+.....+ ..|... |.+++|+|+++++++++.||.|++||+++++....+.
T Consensus 733 ~~~~~~~-~~h~~~-v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~ 782 (1249)
T 3sfz_A 733 KECRNTM-FGHTNS-VNHCRFSPDDELLASCSADGTLRLWDVRSANERKSIN 782 (1249)
T ss_dssp SSEEEEE-CCCSSC-EEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEE
T ss_pred cchhhee-cCCCCC-EEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceec
Confidence 9988877 455555 9999999999999999999999999999987766543
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.89 E-value=8e-21 Score=126.55 Aligned_cols=120 Identities=18% Similarity=0.271 Sum_probs=105.6
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC-ceEE
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS-WQLE 89 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~-~~~~ 89 (139)
|...|.++.| ++++|++|+.||.|++||+.+++.+..+.+|...|.+++| +++++++++.|+.|++||++. ....
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~ 210 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQI 210 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCccee
Confidence 6677888777 8999999999999999999999999999999999999999 567999999999999999984 4445
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..+ ..|... |.+++|+|+++++++++.|+.|++||+++++.+..+
T Consensus 211 ~~~-~~~~~~-v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~ 255 (401)
T 4aez_A 211 GTL-QGHSSE-VCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTK 255 (401)
T ss_dssp EEE-ECCSSC-EEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEE
T ss_pred eEE-cCCCCC-eeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEe
Confidence 555 556655 999999999999999999999999999998877654
No 82
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.89 E-value=5e-22 Score=133.29 Aligned_cols=132 Identities=12% Similarity=0.114 Sum_probs=109.1
Q ss_pred eEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE-ecCCCeEEEEECC----CCCEEEEecCCC
Q psy11518 4 LTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTP----EGSHLISCSDDG 76 (139)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~----~~~~l~~~~~d~ 76 (139)
.+..+....|...|.++.+ ++++|++|+.|+.|++||+.+++++..+. .|...|.+++|+| ++.++++++.|+
T Consensus 204 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg 283 (437)
T 3gre_A 204 RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKT 283 (437)
T ss_dssp EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTE
T ss_pred eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCC
Confidence 4455554447778888877 89999999999999999999999888886 7788999996665 577999999999
Q ss_pred cEEEEEeCCceEEEEEEeCC------------------------CCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 77 SIAIFRVGSWQLEKLFKKAH------------------------KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 77 ~i~~~d~~~~~~~~~~~~~~------------------------~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
.|++||+++++....+.... +...|.+++|+ ++++|++++.|+.|++||+++++.
T Consensus 284 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~ 362 (437)
T 3gre_A 284 FLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSS 362 (437)
T ss_dssp EEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGG
T ss_pred cEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCccc
Confidence 99999999998887774211 23348899999 789999999999999999999887
Q ss_pred eEEE
Q psy11518 133 AYIT 136 (139)
Q Consensus 133 ~~~~ 136 (139)
...+
T Consensus 363 ~~~~ 366 (437)
T 3gre_A 363 SKAV 366 (437)
T ss_dssp CEEE
T ss_pred ceEE
Confidence 6654
No 83
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.88 E-value=5.7e-21 Score=136.29 Aligned_cols=123 Identities=17% Similarity=0.260 Sum_probs=107.7
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc-eE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW-QL 88 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~ 88 (139)
+|..+|.++.| ++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+|+++++++++.||.|++||+.++ ..
T Consensus 53 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~ 132 (814)
T 3mkq_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL 132 (814)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEE
T ss_pred cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceE
Confidence 56667777766 8999999999999999999999999999999999999999999999999999999999999887 44
Q ss_pred EEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 89 EKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
...+ ..|... +.+++|+| ++..+++++.|+.|++||+++++....+
T Consensus 133 ~~~~-~~~~~~-v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 179 (814)
T 3mkq_A 133 EQTF-EGHEHF-VMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL 179 (814)
T ss_dssp EEEE-ECCSSC-EEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred EEEE-cCCCCc-EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEE
Confidence 4444 455555 99999999 8899999999999999999887765544
No 84
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=2.1e-21 Score=130.96 Aligned_cols=117 Identities=19% Similarity=0.208 Sum_probs=95.8
Q ss_pred eeeEEEEec--CCcEEE----EeCCCCeEEEEEccCC--------ce---eeEEEecCCCeEEEEECCC-CCEEEEecCC
Q psy11518 14 TASVRSVAA--TSKLAA----SSGADETVVLYDMVKR--------KQ---SGALMQHEGTITCLKFTPE-GSHLISCSDD 75 (139)
Q Consensus 14 ~~~v~~~~~--~~~~l~----~~~~~~~v~i~~~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d 75 (139)
...+.+++| ++++|+ +|+.|+.|++||+.+. ++ +..+.+|...|.+++|+|+ +.++++++.|
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~D 171 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLAD 171 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETT
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECC
Confidence 345777776 889998 7889999999998764 22 3445568999999999997 8899999999
Q ss_pred CcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 76 ~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
|.|++||++++...... ..|.. .+.+++|+|+|++|++|+.||.|++||++ ++..
T Consensus 172 g~v~iwD~~~~~~~~~~-~~~~~-~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~ 226 (434)
T 2oit_A 172 GSIAVLQVTETVKVCAT-LPSTV-AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEK 226 (434)
T ss_dssp SCEEEEEESSSEEEEEE-ECGGG-CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEE
T ss_pred CeEEEEEcCCCcceeec-cCCCC-ceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccc
Confidence 99999999988655443 34444 49999999999999999999999999998 4443
No 85
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=2.2e-22 Score=138.37 Aligned_cols=118 Identities=12% Similarity=0.115 Sum_probs=101.5
Q ss_pred eecceeeEEEE--ec--CC-cEEEEeCCCCeEEEEEccCCceeeEEEecCC--CeEEEEECCCCCEEEEecCCCcEEEEE
Q psy11518 10 THSHTASVRSV--AA--TS-KLAASSGADETVVLYDMVKRKQSGALMQHEG--TITCLKFTPEGSHLISCSDDGSIAIFR 82 (139)
Q Consensus 10 ~~~~~~~v~~~--~~--~~-~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~~~d 82 (139)
..+|...|.++ .+ ++ .+|++|+.|++|++||+.+++.+..+.+|.. .|.+++|+|+++.+++++.|+.|++||
T Consensus 304 ~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd 383 (524)
T 2j04_B 304 DQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVP 383 (524)
T ss_dssp EECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEE
T ss_pred eecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEE
Confidence 34688888888 44 56 7999999999999999999888888877753 478999999999999999999999999
Q ss_pred eCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
++++.....+ ..|... |.+++|+|++++|++|+.|+.|++||+..
T Consensus 384 ~~~~~~~~~l-~gH~~~-V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 384 SRAAFAVHPL-VSRETT-ITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp TTCTTCCEEE-EECSSC-EEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred Ccccccceee-ecCCCc-eEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 9988776666 356655 99999999999999999999999999754
No 86
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.88 E-value=2.9e-21 Score=127.08 Aligned_cols=122 Identities=19% Similarity=0.263 Sum_probs=99.5
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCe-EEEEEccCCceeeEEE-e-cCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADET-VVLYDMVKRKQSGALM-Q-HEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~-v~i~~~~~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
..+|...|.++.| ++++|++|+.|++ |++||+.+++.+..+. + |...|.+++|+|++++|++++.|+.|++||++
T Consensus 191 ~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 4467788888776 8999999999998 9999999999999998 5 99999999999999999999999999999997
Q ss_pred CceEEE--E------------------EE-eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 85 SWQLEK--L------------------FK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 85 ~~~~~~--~------------------~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
...... . +. ......+...++|+++++.+++++.||.+++|++..++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 271 NDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp CCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred CCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 643111 0 00 01111124679999999999999999999999986543
No 87
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=2.7e-22 Score=133.60 Aligned_cols=110 Identities=16% Similarity=0.112 Sum_probs=92.1
Q ss_pred CCcEEEEeCCCCeEEEEEccCCcee-----eEEEecCCCeEEEEECC--------CCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQS-----GALMQHEGTITCLKFTP--------EGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~-----~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
++.++++++.|++|++||..++... ..+.+|.+.|.+++|+| ++++|++++.|++|++||+.++...
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 5668999999999999999887543 23568999999999987 7889999999999999999888776
Q ss_pred EEEEeCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCCceeE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
..+ ..+... +.+++|+|++. ++++++.|+.|++||+++++...
T Consensus 180 ~~~-~~~~~~-v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~ 223 (393)
T 4gq1_A 180 LAG-YPLSSP-GISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAE 223 (393)
T ss_dssp EEE-EECSSC-EEEEEEETTEEEEEEEEETTSEEEEEETTCCC---
T ss_pred eee-cCCCCC-cEEEEECCCCCceEEecCCCCEEEEEECCCCcccc
Confidence 666 445554 89999999875 79999999999999999887643
No 88
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.88 E-value=4.1e-21 Score=128.85 Aligned_cols=116 Identities=20% Similarity=0.395 Sum_probs=95.3
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCc-----------eeeEEEecC------------CCeEEEEECCCC-
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRK-----------QSGALMQHE------------GTITCLKFTPEG- 66 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~- 66 (139)
+...|.++.| ++++|++|+.||.|++||+.+++ ....+.+|. ..|.+++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 4567777776 89999999999999999998776 477888998 889999999998
Q ss_pred -CEEEEecCCCcEEEEEeCCceEE---------------------------------------EEEEeCCCCcceeEEEE
Q psy11518 67 -SHLISCSDDGSIAIFRVGSWQLE---------------------------------------KLFKKAHKGTAVNHISI 106 (139)
Q Consensus 67 -~~l~~~~~d~~i~~~d~~~~~~~---------------------------------------~~~~~~~~~~~v~~~~~ 106 (139)
..+++++.|+.|++||+.++... ..+...|... |.+++|
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~ 185 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH-INSISI 185 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC-CCEEEE
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc-eEEEEE
Confidence 78999999999999999764432 1221334444 999999
Q ss_pred ccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 107 HPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 107 ~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
+|++++++++ .|+.|++||+++.
T Consensus 186 ~~~~~~l~s~-~d~~i~iwd~~~~ 208 (447)
T 3dw8_B 186 NSDYETYLSA-DDLRINLWHLEIT 208 (447)
T ss_dssp CTTSSEEEEE-CSSEEEEEETTEE
T ss_pred cCCCCEEEEe-CCCeEEEEECCCC
Confidence 9999999998 7999999999843
No 89
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.88 E-value=3.6e-21 Score=125.58 Aligned_cols=119 Identities=12% Similarity=0.193 Sum_probs=96.6
Q ss_pred cceeeEEEEec-----CCcEEEEeCCCCeEEEEEccCCceeeEEE-----ecCCCeEEEEECCCCC-EEEEecCCCcEEE
Q psy11518 12 SHTASVRSVAA-----TSKLAASSGADETVVLYDMVKRKQSGALM-----QHEGTITCLKFTPEGS-HLISCSDDGSIAI 80 (139)
Q Consensus 12 ~~~~~v~~~~~-----~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~ 80 (139)
.+...+.++.+ ++..+++++.|+.|++||+.+++....+. +|...|.+++|+|+++ ++++++.||.|++
T Consensus 207 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 286 (357)
T 3i2n_A 207 NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHL 286 (357)
T ss_dssp ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEE
T ss_pred CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEE
Confidence 45566666665 57899999999999999998877665554 8999999999999988 8999999999999
Q ss_pred EEeCCc-------------------eEEEEEEeCCCCcceeEEEEccCCcEEE-EEcCCCeEEEEEcCCCce
Q psy11518 81 FRVGSW-------------------QLEKLFKKAHKGTAVNHISIHPSGKLAL-SVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 81 ~d~~~~-------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~ 132 (139)
||++.+ ..+..+ ..|... |.+++|+|++++++ +++.|+.|++||+.+.+.
T Consensus 287 wd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 287 WKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV-TLSTQP-ISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEECCSCC--CCTTSCCCCCCCEEEEEEEE-ECCSSC-EEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred eecCCCcccccccCCCCccccccccceeecc-ccCCCC-eeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 999754 233444 345444 99999999999988 899999999999987654
No 90
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.87 E-value=2.2e-20 Score=129.42 Aligned_cols=125 Identities=21% Similarity=0.336 Sum_probs=110.9
Q ss_pred ecceeeEEEEec--CCc-EEEEeCCCCeEEEEEccCCceeeEEEecCC---CeEEEEECCC-CCEEEEecCCCcEEEEEe
Q psy11518 11 HSHTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQSGALMQHEG---TITCLKFTPE-GSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~~~~~d~~i~~~d~ 83 (139)
.+|...+.++.| +++ .+++++.|+.|++||..+++.+..+..|.. .|.+++|+|+ ++++++++.|+.|++||+
T Consensus 157 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~ 236 (615)
T 1pgu_A 157 SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG 236 (615)
T ss_dssp CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEET
T ss_pred ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 456777888877 665 899999999999999999999999999998 9999999999 999999999999999999
Q ss_pred CCceEEEEEEe---CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 84 GSWQLEKLFKK---AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 84 ~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
++++....+.. .|... |.+++|+ +++++++++.|+.|++||+++++.+..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~-v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 291 (615)
T 1pgu_A 237 KSGEFLKYIEDDQEPVQGG-IFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWT 291 (615)
T ss_dssp TTCCEEEECCBTTBCCCSC-EEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CCCCEeEEecccccccCCc-eEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEc
Confidence 99998887733 45544 9999999 99999999999999999999998877654
No 91
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.87 E-value=5.6e-21 Score=127.01 Aligned_cols=117 Identities=20% Similarity=0.246 Sum_probs=105.1
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
+|...+.++.+ +++++++++.|+.|++||+.+++.+..+..|...|.+++|+|++ ++++++.|+.|++||+++++..
T Consensus 245 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 245 GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLL 323 (425)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEe
Confidence 56666776665 88999999999999999999999999999999999999999999 9999999999999999999888
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
..+ ..+... +.+++|+|+++++++++.|+.|++||+++++
T Consensus 324 ~~~-~~~~~~-i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 324 ALS-IVDGVP-IFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEE-ECTTCC-EEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred Eec-ccCCcc-EEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 877 444444 9999999999999999999999999998877
No 92
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.87 E-value=7.3e-21 Score=137.83 Aligned_cols=119 Identities=13% Similarity=0.142 Sum_probs=103.5
Q ss_pred EeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 9 VTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
...+|...|.+++| ++++||+|+.|+.|++|+....+....+ .|...|.+++|+| +++|++++.|+.|++||+.++
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~-~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~ 89 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKL-EDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQ 89 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEEC-SSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTC
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEc-CCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCC
Confidence 34578888888887 8999999999999999998877665544 4778999999999 889999999999999999999
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
+....+. +... |.+++|+|+++++++|+.||.|++||+++++.
T Consensus 90 ~~~~~~~--~~~~-V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 90 KVLTTVF--VPGK-ITSIDTDASLDWMLIGLQNGSMIVYDIDRDQL 132 (902)
T ss_dssp SEEEEEE--CSSC-EEEEECCTTCSEEEEEETTSCEEEEETTTTEE
T ss_pred cEEEEEc--CCCC-EEEEEECCCCCEEEEEcCCCcEEEEECCCCcc
Confidence 8887773 4443 99999999999999999999999999998765
No 93
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.87 E-value=1.3e-20 Score=126.69 Aligned_cols=116 Identities=17% Similarity=0.371 Sum_probs=104.4
Q ss_pred cceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEE
Q psy11518 12 SHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKL 91 (139)
Q Consensus 12 ~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~ 91 (139)
++...|.++.++++++++|+.|+.|++||..+++....+.+|...|.+++| +++++++|+.||.|++||+.+++....
T Consensus 131 ~~~~~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~ 208 (435)
T 1p22_A 131 ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT 208 (435)
T ss_dssp SSCCCEEEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE
T ss_pred CCCCcEEEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 466789999999999999999999999999999999999999999999998 778999999999999999999998888
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
+ ..|... |.+++|+ +..+++++.|+.|++||+++++.+
T Consensus 209 ~-~~h~~~-v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~ 246 (435)
T 1p22_A 209 L-IHHCEA-VLHLRFN--NGMMVTCSKDRSIAVWDMASPTDI 246 (435)
T ss_dssp E-CCCCSC-EEEEECC--TTEEEEEETTSCEEEEECSSSSCC
T ss_pred E-cCCCCc-EEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCc
Confidence 7 455554 9999997 459999999999999999987654
No 94
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.87 E-value=2.5e-21 Score=125.57 Aligned_cols=121 Identities=23% Similarity=0.286 Sum_probs=99.2
Q ss_pred EeecceeeEEEEec----CCcEEEEeCCCCeEEEEEccCC--ceeeEEEecCCCeEEEEECCC--CCEEEEecCCCcEEE
Q psy11518 9 VTHSHTASVRSVAA----TSKLAASSGADETVVLYDMVKR--KQSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAI 80 (139)
Q Consensus 9 ~~~~~~~~v~~~~~----~~~~l~~~~~~~~v~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~ 80 (139)
...+|...|.++.| ++++|++|+.|+.|++||++++ +....+.+|...|.+++|+|+ +.++++++.|+.|++
T Consensus 52 ~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~l 131 (316)
T 3bg1_A 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISL 131 (316)
T ss_dssp EEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEE
T ss_pred EEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEE
Confidence 44578889998887 3789999999999999999887 356677889999999999997 789999999999999
Q ss_pred EEeCCceEE--EEEEeCCCCcceeEEEEccC-----------------CcEEEEEcCCCeEEEEEcCCC
Q psy11518 81 FRVGSWQLE--KLFKKAHKGTAVNHISIHPS-----------------GKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 81 ~d~~~~~~~--~~~~~~~~~~~v~~~~~~~~-----------------~~~l~~~~~d~~i~i~d~~~~ 130 (139)
||++..... ......|... +.+++|+|+ +++|++++.|+.|++||++.+
T Consensus 132 wd~~~~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 132 LTYTGEGQWEVKKINNAHTIG-CNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED 199 (316)
T ss_dssp EEECSSSCEEECCBTTSSSSC-BCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTT
T ss_pred EecCCCCCcceeeeeccccCC-cceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCC
Confidence 999875322 1121334444 899999997 478999999999999999755
No 95
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.87 E-value=2.2e-20 Score=125.11 Aligned_cols=119 Identities=22% Similarity=0.368 Sum_probs=98.9
Q ss_pred cceeeEEEEec---CCcEEEE--eCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec--CCCcEEEEEeC
Q psy11518 12 SHTASVRSVAA---TSKLAAS--SGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS--DDGSIAIFRVG 84 (139)
Q Consensus 12 ~~~~~v~~~~~---~~~~l~~--~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~ 84 (139)
.|...|.++.| +...+++ |+.|+.|++||+.+++....+..| ..+.++.|+|+++.+++++ .|+.|++||+.
T Consensus 274 ~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~ 352 (420)
T 4gga_A 274 QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYP 352 (420)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETT
T ss_pred ccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECC
Confidence 45666777765 5566655 468999999999999988888765 5688999999998887654 78999999999
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
+++.+..+ ..|... |.+++|+|++++|++|+.|+.|++||+.+..+.
T Consensus 353 ~~~~v~~l-~gH~~~-V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~ 399 (420)
T 4gga_A 353 TMAKVAEL-KGHTSR-VLSLTMSPDGATVASAAADETLRLWRCFELDPA 399 (420)
T ss_dssp TCCEEEEE-CCCSSC-EEEEEECTTSSCEEEEETTTEEEEECCSCSSCC
T ss_pred CCcEEEEE-cCCCCC-EEEEEEcCCCCEEEEEecCCeEEEEECCCCCcc
Confidence 99999888 566665 999999999999999999999999999765443
No 96
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=3e-21 Score=128.51 Aligned_cols=124 Identities=18% Similarity=0.232 Sum_probs=96.4
Q ss_pred eecceeeEEEEec----------CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCC-CEEEEecCCCcE
Q psy11518 10 THSHTASVRSVAA----------TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEG-SHLISCSDDGSI 78 (139)
Q Consensus 10 ~~~~~~~v~~~~~----------~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i 78 (139)
..+|...|.++.| ++++|++|+.|++|++||+.++.++..+..|...+.+++|+|++ +++++++.|+.|
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v 211 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNI 211 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEE
Confidence 3478888988887 57899999999999999999998888888999999999999976 579999999999
Q ss_pred EEEEeCCceEEEEEE------------------------eCCCCcceeEEEEc-cCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 79 AIFRVGSWQLEKLFK------------------------KAHKGTAVNHISIH-PSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~------------------------~~~~~~~v~~~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
++||+++++...... ..+. ..+.++.|. |+++.+++++.|+.+++||+..++..
T Consensus 212 ~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~-~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~ 290 (393)
T 4gq1_A 212 RIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIA-SSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDY 290 (393)
T ss_dssp EEEETTCCC----------CSCCCSEEEESGGGC------CCS-SSCSEEEEETTTTCEEEEECTTSEEEEEEC------
T ss_pred EEEECCCCcccccccccCCcccceEEecccccceeeeeccccc-ccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCC
Confidence 999998775433221 1122 237888886 79999999999999999999877654
Q ss_pred E
Q psy11518 134 Y 134 (139)
Q Consensus 134 ~ 134 (139)
.
T Consensus 291 ~ 291 (393)
T 4gq1_A 291 N 291 (393)
T ss_dssp -
T ss_pred c
Confidence 3
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.87 E-value=3.1e-20 Score=119.20 Aligned_cols=125 Identities=23% Similarity=0.286 Sum_probs=103.3
Q ss_pred eeEEEEEeecceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy11518 3 TLTQTFVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF 81 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 81 (139)
++.+.+ .+|...|.++.+ +++++++++.||.|++||+.+++....+..|...|.+++|+|+++++++++.|+.+++|
T Consensus 9 ~~~~~l--~~h~~~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 9 QLSATL--KGHDQDVRDVVAVDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp EEEEEE--CCCSSCEEEEEEEETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHh--hCCCCCcEEEEecCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 444444 478888888887 89999999999999999999999899999999999999999999999999999999999
Q ss_pred EeCCc---eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 82 RVGSW---QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 82 d~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
++... +....+ ..|... +.+++| +++++++++.|+.|++|| .++.+..
T Consensus 87 ~~~~~~~~~~~~~~-~~~~~~-i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~ 137 (313)
T 3odt_A 87 PLFATSGEDPLYTL-IGHQGN-VCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYN 137 (313)
T ss_dssp ETTCCTTSCC-CEE-CCCSSC-EEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEE
T ss_pred EeeecCCCCcccch-hhcccC-EEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEe
Confidence 98654 334444 344444 999999 578999999999999999 4444443
No 98
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.87 E-value=8.2e-22 Score=132.64 Aligned_cols=119 Identities=19% Similarity=0.262 Sum_probs=97.4
Q ss_pred eeEEEEe--cCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCC-EEEEecCCCcEEEEEeCCceEEEE
Q psy11518 15 ASVRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKL 91 (139)
Q Consensus 15 ~~v~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~ 91 (139)
..+.++. +++.+|++|+.|+.|++||+. ++.+..+.+|...|.+++|+|++. ++++++.|+.|++||+++......
T Consensus 210 ~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~ 288 (435)
T 4e54_B 210 IWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKAS 288 (435)
T ss_dssp CCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSC
T ss_pred ccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccce
Confidence 3444454 489999999999999999985 456777889999999999999876 678999999999999987654332
Q ss_pred E--EeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 92 F--KKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 92 ~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
+ ...|... |.+++|+|++++|++++.|+.|++||+++++....
T Consensus 289 ~~~~~~h~~~-v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~ 333 (435)
T 4e54_B 289 FLYSLPHRHP-VNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLG 333 (435)
T ss_dssp CSBCCBCSSC-EEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEE
T ss_pred EEEeeecccc-ccceeECCCCCeeEEEcCCCEEEEEECCCCccceE
Confidence 2 1234444 99999999999999999999999999998876544
No 99
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.87 E-value=2.4e-20 Score=121.95 Aligned_cols=126 Identities=21% Similarity=0.337 Sum_probs=102.1
Q ss_pred eecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEE--CCCCCEEEEecCCCcEEEEEeCC
Q psy11518 10 THSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKF--TPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
..+|...|.++.| ++++|++++.|+.|++||+.+++.+. +..|...|.+++| +|+++++++++.|+.|++||+++
T Consensus 82 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 160 (368)
T 3mmy_A 82 QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRS 160 (368)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSC
T ss_pred eccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCC
Confidence 3467777887776 89999999999999999999887665 5679999999999 89999999999999999999876
Q ss_pred ceEEEEEE------------------------------------------------------------------------
Q psy11518 86 WQLEKLFK------------------------------------------------------------------------ 93 (139)
Q Consensus 86 ~~~~~~~~------------------------------------------------------------------------ 93 (139)
++....+.
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i 240 (368)
T 3mmy_A 161 SNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV 240 (368)
T ss_dssp SSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEE
T ss_pred CcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcE
Confidence 53221110
Q ss_pred -----------------eCCCCc-----------ceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 94 -----------------KAHKGT-----------AVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 94 -----------------~~~~~~-----------~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..+... +|.+++|+|++++|++++.||.|++||+++++.+..+
T Consensus 241 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 311 (368)
T 3mmy_A 241 AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTS 311 (368)
T ss_dssp EEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred EEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEe
Confidence 001100 4889999999999999999999999999998887654
No 100
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.87 E-value=2.2e-20 Score=123.67 Aligned_cols=122 Identities=20% Similarity=0.276 Sum_probs=95.1
Q ss_pred cceeeEEEEec--CCc-EEEEeCCCCeEEEEEccCCc-eeeEE---------------EecCCCeEEEEECCCCCEEEEe
Q psy11518 12 SHTASVRSVAA--TSK-LAASSGADETVVLYDMVKRK-QSGAL---------------MQHEGTITCLKFTPEGSHLISC 72 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~-~l~~~~~~~~v~i~~~~~~~-~~~~~---------------~~~~~~v~~~~~~~~~~~l~~~ 72 (139)
+|...+.++.+ +++ ++++++.|+.|++||+.++. .+..+ ..|...|.+++|+|++++++++
T Consensus 184 ~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 263 (408)
T 4a11_B 184 GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV 263 (408)
T ss_dssp CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe
Confidence 56777777776 666 69999999999999997764 33333 5688899999999999999999
Q ss_pred cCCCcEEEEEeCCce-----------------------------------------------EEEEEEeCCCCcceeEEE
Q psy11518 73 SDDGSIAIFRVGSWQ-----------------------------------------------LEKLFKKAHKGTAVNHIS 105 (139)
Q Consensus 73 ~~d~~i~~~d~~~~~-----------------------------------------------~~~~~~~~~~~~~v~~~~ 105 (139)
+.|+.|++||+.+++ ....+ ..|.. .|.+++
T Consensus 264 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~-~~~~~-~v~~~~ 341 (408)
T 4a11_B 264 GTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML-KGHYK-TVDCCV 341 (408)
T ss_dssp ETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE-CCCSS-CEEEEE
T ss_pred cCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee-ccCCC-eEEEEE
Confidence 999999999987543 22233 23444 499999
Q ss_pred EccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 106 IHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 106 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
|+|++++|++++.||.|++||+++++++..
T Consensus 342 ~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 371 (408)
T 4a11_B 342 FQSNFQELYSGSRDCNILAWVPSLYEPVPD 371 (408)
T ss_dssp EETTTTEEEEEETTSCEEEEEECC------
T ss_pred EcCCCCEEEEECCCCeEEEEeCCCCCccCC
Confidence 999999999999999999999999887654
No 101
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.2e-20 Score=122.13 Aligned_cols=118 Identities=17% Similarity=0.157 Sum_probs=104.3
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCC-------------
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG------------- 76 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------------- 76 (139)
.|...+.++.| ++.+|++++.|+.|++||+.+++.+..+. +...+.+++|+|+++++++++.++
T Consensus 216 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 294 (369)
T 3zwl_B 216 LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGK 294 (369)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------
T ss_pred cCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCc
Confidence 46666777766 89999999999999999999999888887 678899999999999999999888
Q ss_pred -cEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 77 -SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 77 -~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
.+++||..+++....+ ..|... |.+++|+|++++|++++.||.|++|+++++..
T Consensus 295 ~~i~~~d~~~~~~~~~~-~~~~~~-v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 295 FEARFYHKIFEEEIGRV-QGHFGP-LNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp CEEEEEETTTCCEEEEE-ECCSSC-EEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred ceeEEEecCCCcchhhe-ecccCc-EEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 8999999999988887 555555 99999999999999999999999999987644
No 102
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.87 E-value=3.7e-20 Score=124.50 Aligned_cols=123 Identities=24% Similarity=0.376 Sum_probs=106.0
Q ss_pred eecceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 10 THSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 10 ~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
..+|...|.++.++++++++|+.||.|++||+.+++.+..+.+|...|.+++|++ ..+++++.|+.|++||+.++...
T Consensus 169 ~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~ 246 (435)
T 1p22_A 169 LTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDI 246 (435)
T ss_dssp ECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCC
T ss_pred EcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCc
Confidence 4478889999999999999999999999999999999999999999999999974 59999999999999999877644
Q ss_pred E--EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 90 K--LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 90 ~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
. .....|... |.+++| +++++++++.|+.|++||+++++.+..+.
T Consensus 247 ~~~~~~~~~~~~-v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 293 (435)
T 1p22_A 247 TLRRVLVGHRAA-VNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN 293 (435)
T ss_dssp EEEEEECCCSSC-EEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred eeeeEecCCCCc-EEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEc
Confidence 2 222445444 999988 68899999999999999999998877654
No 103
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.86 E-value=1.3e-20 Score=122.86 Aligned_cols=124 Identities=15% Similarity=0.197 Sum_probs=99.7
Q ss_pred eecceeeEEEEec--CCc-EEEEeCC---CCeEEEEEccCCceeeEE-EecCCCeEEEEECCC---CCEEEEecCCCcEE
Q psy11518 10 THSHTASVRSVAA--TSK-LAASSGA---DETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPE---GSHLISCSDDGSIA 79 (139)
Q Consensus 10 ~~~~~~~v~~~~~--~~~-~l~~~~~---~~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~ 79 (139)
..+|...|.++.| ++. ++++++. |+.|++||+.+++..... .+|...|.+++|+|+ ++++++++.|+.|+
T Consensus 14 ~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 93 (357)
T 3i2n_A 14 QKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLH 93 (357)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEE
T ss_pred ccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEE
Confidence 3468888888887 564 5566765 999999999988765443 378999999999998 69999999999999
Q ss_pred EEEeCCce-EEEEEEeCCCCcceeEEE------EccCCcEEEEEcCCCeEEEEEcCCCc-eeEE
Q psy11518 80 IFRVGSWQ-LEKLFKKAHKGTAVNHIS------IHPSGKLALSVGKDKTLRTWNLVKGR-SAYI 135 (139)
Q Consensus 80 ~~d~~~~~-~~~~~~~~~~~~~v~~~~------~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~ 135 (139)
+||+.+++ ....+ ..|... |.+++ |+|+++++++++.|+.|++||+++++ .+..
T Consensus 94 iwd~~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~ 155 (357)
T 3i2n_A 94 IWNLEAPEMPVYSV-KGHKEI-INAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVAN 155 (357)
T ss_dssp EECTTSCSSCSEEE-CCCSSC-EEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEE
T ss_pred EEeCCCCCccEEEE-Eecccc-eEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCccee
Confidence 99999887 55565 455555 99995 57899999999999999999999886 4443
No 104
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.86 E-value=7.1e-21 Score=127.71 Aligned_cols=123 Identities=18% Similarity=0.346 Sum_probs=99.8
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCC-ceeeE-------EEecCCCeEEEEECCCC-CEEEEecCCCcEE
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKR-KQSGA-------LMQHEGTITCLKFTPEG-SHLISCSDDGSIA 79 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~-~~~~~-------~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~ 79 (139)
.+|...|.++.| ++++|++| .|+.|++||+.+. +.+.. +.+|...|.+++|+|++ +++++++.|+.|+
T Consensus 174 ~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 174 NAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp SCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred cCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 467777888776 89999999 7999999999843 33332 45789999999999998 9999999999999
Q ss_pred EEEeCCceE----EEEEEeCCCC-----------cceeEEEEccCCcEEEEEcCCCeEEEEEcCC-CceeEEE
Q psy11518 80 IFRVGSWQL----EKLFKKAHKG-----------TAVNHISIHPSGKLALSVGKDKTLRTWNLVK-GRSAYIT 136 (139)
Q Consensus 80 ~~d~~~~~~----~~~~~~~~~~-----------~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~ 136 (139)
+||++++.. ...+ ..+.. ..|.+++|+|++++|++++. +.|++||+++ ++.+..+
T Consensus 253 iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~ 323 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLF-EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETY 323 (447)
T ss_dssp EEETTTCSSSCTTCEEE-CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCE
T ss_pred EEECcCCccccceeeEe-ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCcccccee
Confidence 999998775 4555 33333 14999999999999999999 9999999997 6665444
No 105
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.86 E-value=5.7e-21 Score=127.07 Aligned_cols=118 Identities=14% Similarity=0.202 Sum_probs=103.0
Q ss_pred eeeEEEEec--CC-cEEEEeCCCC---eEEEEEccCC-ceeeEEE-ecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeC
Q psy11518 14 TASVRSVAA--TS-KLAASSGADE---TVVLYDMVKR-KQSGALM-QHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 14 ~~~v~~~~~--~~-~~l~~~~~~~---~v~i~~~~~~-~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~ 84 (139)
...+.++.| ++ .++++++.++ .|++||+.++ .++..+. +|...|.+++|+| +++++++++.|+.|++||++
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~ 293 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPE 293 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSS
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCC
Confidence 566777776 54 6899999998 9999999986 6677787 8999999999999 89999999999999999999
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCC-cEEEEEcCCCeEEEEEcCCCcee
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSG-KLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
+++....+ ..|... |.+++|+|++ .++++++.|+.|++||+.+.+..
T Consensus 294 ~~~~~~~~-~~~~~~-v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 294 SAEQLSQF-PARGNW-CFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp SCCEEEEE-ECSSSC-CCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred CCccceee-cCCCCc-eEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 99888887 455554 9999999999 89999999999999999887643
No 106
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.86 E-value=1.1e-19 Score=122.42 Aligned_cols=120 Identities=20% Similarity=0.361 Sum_probs=98.8
Q ss_pred ecceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE
Q psy11518 11 HSHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 11 ~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 90 (139)
.+|...+.++.++++.+++|+.|+.|++||+.+++.+..+.+|...|.+++| +++++++++.|+.|++||+++++...
T Consensus 196 ~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~ 273 (445)
T 2ovr_B 196 YGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLH 273 (445)
T ss_dssp CCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEE
T ss_pred CCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeE
Confidence 4677788888888888888888899999998888888888888888888888 67788888889999999988888777
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.+ ..|... +.+++| ++.++++++.|+.|++||+++++.+..+
T Consensus 274 ~~-~~~~~~-v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 315 (445)
T 2ovr_B 274 TL-QGHTNR-VYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTL 315 (445)
T ss_dssp EE-CCCSSC-EEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred Ee-cCCCCc-eEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 76 344444 888888 7888889999999999999888877654
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.86 E-value=9.3e-21 Score=130.07 Aligned_cols=114 Identities=16% Similarity=0.234 Sum_probs=93.2
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCC-----CeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEG-----TITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
+...|.++.| +|..|++++.||.|++||.+. .+..+. |.. .+.+++|+|+|++|++|+.||.|++||+.+
T Consensus 84 ~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~ 160 (588)
T 2j04_A 84 PVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRK 160 (588)
T ss_dssp CSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCC
T ss_pred CCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCC
Confidence 3566777776 999999999999999999544 555566 655 499999999999999999999999999988
Q ss_pred ce-------EEEEEE---eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 86 WQ-------LEKLFK---KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 86 ~~-------~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
+. ....+. ..|. ..|.+++|+|+| +++++.|+.+++||+.+++.
T Consensus 161 ~~l~~~~~i~l~ti~~~~~gh~-~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 161 NSENTPEFYFESSIRLSDAGSK-DWVTHIVWYEDV--LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp CTTTCCCCEEEEEEECSCTTCC-CCEEEEEEETTE--EEEEETTCCEEEECCCSSSS
T ss_pred Cccccccceeeeeeeccccccc-ccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcc
Confidence 74 244442 2333 349999999999 88889999999999988773
No 108
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.86 E-value=5.2e-20 Score=123.78 Aligned_cols=123 Identities=19% Similarity=0.257 Sum_probs=99.0
Q ss_pred ecceeeEEEEec--CCc-EEEEeCCCCeEEEEEccCCce-------eeEEEecCCCeEEEEECC-CCCEEEEecCCCcEE
Q psy11518 11 HSHTASVRSVAA--TSK-LAASSGADETVVLYDMVKRKQ-------SGALMQHEGTITCLKFTP-EGSHLISCSDDGSIA 79 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~-~l~~~~~~~~v~i~~~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~ 79 (139)
.+|...+.++.| ++. +|++|+.||.|++|++.++.. ...+..|...|.+++|+| ++.++++++.|+.|+
T Consensus 178 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~ 257 (430)
T 2xyi_A 178 RGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLM 257 (430)
T ss_dssp ECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred cCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEE
Confidence 356666666666 666 999999999999999987422 456678999999999999 788999999999999
Q ss_pred EEEeCCc---eEEEEEEeCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCC-ceeEE
Q psy11518 80 IFRVGSW---QLEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKG-RSAYI 135 (139)
Q Consensus 80 ~~d~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~-~~~~~ 135 (139)
+||+++. .....+ ..|... |.+++|+|+++ ++++++.|+.|++||+++. +++..
T Consensus 258 i~d~~~~~~~~~~~~~-~~~~~~-v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~ 316 (430)
T 2xyi_A 258 IWDTRNNNTSKPSHTV-DAHTAE-VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 316 (430)
T ss_dssp EEETTCSCSSSCSEEE-ECCSSC-EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE
T ss_pred EEECCCCCCCcceeEe-ecCCCC-eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEE
Confidence 9999876 344444 355554 99999999887 6889999999999999983 44443
No 109
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.86 E-value=5.4e-20 Score=123.87 Aligned_cols=120 Identities=21% Similarity=0.344 Sum_probs=104.1
Q ss_pred ecceee-EEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 11 HSHTAS-VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 11 ~~~~~~-v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
.+|... +.++.++++++++|+.|+.|++||+.+++.+..+.+|...|.+++|+ ++.+++++.||.|++||+.+++..
T Consensus 115 ~~h~~~v~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~ 192 (445)
T 2ovr_B 115 KGHDDHVITCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECI 192 (445)
T ss_dssp ECSTTSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEE
T ss_pred cccCCCcEEEEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEE
Confidence 356654 56788899999999999999999999999999999999999999996 569999999999999999999888
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..+ ..|... |.+++|+ ++.+++++.|+.|++||+++++.+..+
T Consensus 193 ~~~-~~h~~~-v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~ 235 (445)
T 2ovr_B 193 HTL-YGHTST-VRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVL 235 (445)
T ss_dssp EEE-CCCSSC-EEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEE
T ss_pred EEE-CCCCCc-EEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEE
Confidence 877 455554 9999985 677999999999999999998877654
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.86 E-value=5.4e-20 Score=124.21 Aligned_cols=119 Identities=13% Similarity=0.083 Sum_probs=101.7
Q ss_pred ecceeeEEEEec--C---CcEEEEeCCCCeEEEEEccCCceeeE-EEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 11 HSHTASVRSVAA--T---SKLAASSGADETVVLYDMVKRKQSGA-LMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 11 ~~~~~~v~~~~~--~---~~~l~~~~~~~~v~i~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
.+|...+.++.| + +++|++++.|+.|++||+.+++.+.. +.+|...|.+++|+ ++++|++++.|+.|++||+.
T Consensus 192 ~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~ 270 (450)
T 2vdu_B 192 LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWK 270 (450)
T ss_dssp EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETT
T ss_pred ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECC
Confidence 356677777776 7 88999999999999999999988877 55899999999999 99999999999999999999
Q ss_pred CceEEEEEEeC-----------------------CCCcceeEEEEccCCcEEEEEc-CCCeEEEEEc--CCC
Q psy11518 85 SWQLEKLFKKA-----------------------HKGTAVNHISIHPSGKLALSVG-KDKTLRTWNL--VKG 130 (139)
Q Consensus 85 ~~~~~~~~~~~-----------------------~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~--~~~ 130 (139)
+++.+..+... .....+.+++|+|+++++++++ .|+.|++|++ .++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 271 TGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQK 342 (450)
T ss_dssp TCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSST
T ss_pred CCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCC
Confidence 99888777422 1123488999999999999998 8999999999 555
No 111
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=1.3e-19 Score=116.60 Aligned_cols=119 Identities=19% Similarity=0.309 Sum_probs=90.4
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCcee----eE------------------------------------
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQS----GA------------------------------------ 49 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~----~~------------------------------------ 49 (139)
+|...+.++.+ +++++++++.|+.|++||+.+++.. ..
T Consensus 148 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd 227 (318)
T 4ggc_A 148 GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWN 227 (318)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEE
T ss_pred CccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEe
Confidence 45555555554 7888888888888888887653211 00
Q ss_pred --------EEecCCCeEEEEECCCCCEEEEe--cCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC
Q psy11518 50 --------LMQHEGTITCLKFTPEGSHLISC--SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD 119 (139)
Q Consensus 50 --------~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 119 (139)
...+...+..+.|+|++..++++ +.|+.|++||+++++.+..+ ..|... |.+++|+|++++|++++.|
T Consensus 228 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l-~gH~~~-V~~l~~spdg~~l~S~s~D 305 (318)
T 4ggc_A 228 VCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL-KGHTSR-VLSLTMSPDGATVASAAAD 305 (318)
T ss_dssp TTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE-CCCSSC-EEEEEECTTSSCEEEEETT
T ss_pred cccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEE-cCCCCC-EEEEEEcCCCCEEEEEecC
Confidence 11234567788888888777654 47899999999999998888 566655 9999999999999999999
Q ss_pred CeEEEEEcCCCce
Q psy11518 120 KTLRTWNLVKGRS 132 (139)
Q Consensus 120 ~~i~i~d~~~~~~ 132 (139)
+.|++||+.+..|
T Consensus 306 ~~v~iWd~~~~dP 318 (318)
T 4ggc_A 306 ETLRLWRCFELDP 318 (318)
T ss_dssp TEEEEECCSCCCC
T ss_pred CeEEEEECCCCCC
Confidence 9999999987643
No 112
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.86 E-value=7.3e-21 Score=123.69 Aligned_cols=115 Identities=10% Similarity=0.129 Sum_probs=99.3
Q ss_pred ecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCc---eeeEEEecCCCeEEEEECCCCC-EEEEecCCCcEEEEEe-
Q psy11518 11 HSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRK---QSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRV- 83 (139)
Q Consensus 11 ~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~- 83 (139)
.+|...|.++.| ++++|++++.|+.|++|++.+++ ....+..|...|.+++|+|+++ ++++++.|+.|++||+
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~ 87 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLI 87 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSS
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEec
Confidence 367788888877 88999999999999999998876 3455668999999999999999 9999999999999999
Q ss_pred CCceEEEEEEeC--CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 84 GSWQLEKLFKKA--HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 84 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
.+++. ..+ .. |... |.+++|+| +.++++++.|+.|++||+++
T Consensus 88 ~~~~~-~~~-~~~~~~~~-v~~l~~~~-~~~l~s~~~d~~i~iwd~~~ 131 (342)
T 1yfq_A 88 GSPSF-QAL-TNNEANLG-ICRICKYG-DDKLIAASWDGLIEVIDPRN 131 (342)
T ss_dssp SSSSE-EEC-BSCCCCSC-EEEEEEET-TTEEEEEETTSEEEEECHHH
T ss_pred cCCce-Eec-cccCCCCc-eEEEEeCC-CCEEEEEcCCCeEEEEcccc
Confidence 87766 333 33 4444 99999999 99999999999999999986
No 113
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.86 E-value=5.4e-20 Score=120.33 Aligned_cols=106 Identities=15% Similarity=0.084 Sum_probs=88.9
Q ss_pred EEEeCCCCeEEEEEcc---------CCceeeEEE-ecCCCeEEEEECC--CCCEEEEecCCCcEEEEEeCCceEEEEEEe
Q psy11518 27 AASSGADETVVLYDMV---------KRKQSGALM-QHEGTITCLKFTP--EGSHLISCSDDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 27 l~~~~~~~~v~i~~~~---------~~~~~~~~~-~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 94 (139)
+++++.|+.|++|+.. +++.+..+. .|...|.+++|+| +++++++++.|+.|++||+++++......
T Consensus 88 ~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~- 166 (343)
T 3lrv_A 88 IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHS- 166 (343)
T ss_dssp EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEEC-
T ss_pred eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEe-
Confidence 8999999999999765 444444444 5668899999999 99999999999999999999998866553
Q ss_pred CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 95 AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
.+....+.+++|+|++.++++|+.|+.|++||+++++.+
T Consensus 167 ~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 167 AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSC
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCC
Confidence 333434999999999999999999999999999998876
No 114
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.86 E-value=1.1e-19 Score=121.80 Aligned_cols=126 Identities=21% Similarity=0.254 Sum_probs=108.5
Q ss_pred eeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy11518 3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
+..+.+..++|...|.+++| ++++|++|+.|+.|++||+.+++.+..+.+|...+.++++ ++..+++|+.|+.+.+
T Consensus 136 ~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~ 213 (420)
T 4gga_A 136 DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHH 213 (420)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred CEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeE
Confidence 45566777788888888887 8999999999999999999999999999999999999887 5679999999999999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
||.............|... +..+.|+|+++++++++.|+.+++|+..+++
T Consensus 214 ~d~~~~~~~~~~~~~h~~~-~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~ 263 (420)
T 4gga_A 214 HDVRVAEHHVATLSGHSQE-VCGLRWAPDGRHLASGGNDNLVNVWPSAPGE 263 (420)
T ss_dssp EETTSSSCEEEEEECCSSC-EEEEEECTTSSEEEEEETTSCEEEEESSCCS
T ss_pred eeecccceeeEEecccccc-eeeeeecCCCCeeeeeeccccceEEeecccc
Confidence 9988755433332555555 9999999999999999999999999998765
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.85 E-value=2.9e-20 Score=132.57 Aligned_cols=122 Identities=20% Similarity=0.321 Sum_probs=103.2
Q ss_pred EeecceeeEEEEec--C--CcEEEEeCCCCeEEEEEccCCc--eeeEEEecCCCeEEEEECCC--CCEEEEecCCCcEEE
Q psy11518 9 VTHSHTASVRSVAA--T--SKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPE--GSHLISCSDDGSIAI 80 (139)
Q Consensus 9 ~~~~~~~~v~~~~~--~--~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~ 80 (139)
...+|...|.++.| + ++++++|+.||.|++||+.+++ .+..+.+|...|.+++|+|+ ++.+++++.||.|++
T Consensus 48 ~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~v 127 (753)
T 3jro_A 48 TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSV 127 (753)
T ss_dssp EECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred eccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEE
Confidence 34478888888887 4 8999999999999999999886 67778889999999999998 999999999999999
Q ss_pred EEeCCceEEEEEE-eCCCCcceeEEEEcc-------------CCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 81 FRVGSWQLEKLFK-KAHKGTAVNHISIHP-------------SGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 81 ~d~~~~~~~~~~~-~~~~~~~v~~~~~~~-------------~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
||++++....... ..+... |.+++|+| ++.++++++.||.|++||++++.
T Consensus 128 wdl~~~~~~~~~~~~~~~~~-v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~ 191 (753)
T 3jro_A 128 VEFKENGTTSPIIIDAHAIG-VNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA 191 (753)
T ss_dssp EECCSSSCCCCEEEECCSSC-EEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTT
T ss_pred EEeecCCCcceeEeecCCCc-eEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCc
Confidence 9998773322221 344444 99999999 58999999999999999998874
No 116
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.5e-20 Score=125.07 Aligned_cols=126 Identities=18% Similarity=0.281 Sum_probs=106.0
Q ss_pred ecceeeEEEEec--C-CcEEEEeCCCCeEEEEEccCCceeeEEEec------CCCeEEEEECCCC-CEEEEecCCC---c
Q psy11518 11 HSHTASVRSVAA--T-SKLAASSGADETVVLYDMVKRKQSGALMQH------EGTITCLKFTPEG-SHLISCSDDG---S 77 (139)
Q Consensus 11 ~~~~~~v~~~~~--~-~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~~d~---~ 77 (139)
.+|...+.++.| + +.++++++.|+.|++||+.+++.+..+..+ ...+.+++|+|++ .++++++.|+ .
T Consensus 162 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 162 MSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp CCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred cCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 356677777777 5 789999999999999999999988888776 7889999999986 6899999998 9
Q ss_pred EEEEEeCCc-eEEEEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 78 IAIFRVGSW-QLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 78 i~~~d~~~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
|++||++++ .....+...|... |.+++|+| +++++++++.|+.|++||+++++.+..+.
T Consensus 242 i~~~d~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~ 302 (416)
T 2pm9_A 242 ILIWDLRNANTPLQTLNQGHQKG-ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFP 302 (416)
T ss_dssp CCEEETTSTTSCSBCCCSCCSSC-EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEE
T ss_pred EEEEeCCCCCCCcEEeecCccCc-eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeec
Confidence 999999886 4444441145544 99999999 99999999999999999999998877654
No 117
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.85 E-value=7.3e-20 Score=123.03 Aligned_cols=117 Identities=27% Similarity=0.467 Sum_probs=99.5
Q ss_pred ecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCC---ceeeEEEecCCCeEEEEECCCCC-EEEEecCCCcEEEEEe
Q psy11518 11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVKR---KQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRV 83 (139)
Q Consensus 11 ~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~ 83 (139)
.+|...+.++.| ++.++++++.|+.|++||+.++ +.+..+..|...|.+++|+|++. ++++++.||.|++||+
T Consensus 228 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~ 307 (430)
T 2xyi_A 228 TGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL 307 (430)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred cCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeC
Confidence 367777887776 6789999999999999999877 57778889999999999999887 6889999999999999
Q ss_pred CC-ceEEEEEEeCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCC
Q psy11518 84 GS-WQLEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 84 ~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~ 129 (139)
++ ...+..+ ..|... |.+++|+|+++ ++++++.|+.|++||++.
T Consensus 308 ~~~~~~~~~~-~~h~~~-v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 308 RNLKLKLHSF-ESHKDE-IFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp TCTTSCSEEE-ECCSSC-EEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCCCCCeEEe-ecCCCC-EEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 87 4445555 445554 99999999985 689999999999999987
No 118
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.85 E-value=2.3e-19 Score=115.51 Aligned_cols=127 Identities=20% Similarity=0.253 Sum_probs=108.4
Q ss_pred eeEEEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy11518 3 TLTQTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
+.++.+..++|...|.++.| +++++++|+.|+.|++||+++++.+..+.+|...+.++.+ ++..+++++.++.+.+
T Consensus 56 ~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~ 133 (318)
T 4ggc_A 56 DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHH 133 (318)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEe
Confidence 45677777788888888887 8999999999999999999999999999999988877655 5679999999999999
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
|+.............|... +..+.++++++++++++.|+.|++||+++++.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 134 HDVRVAEHHVATLSGHSQE-VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp EETTSSSCEEEEEECCSSC-EEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred eecCCCceeEEEEcCccCc-eEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 9988765444333555555 99999999999999999999999999987653
No 119
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.85 E-value=1.3e-19 Score=117.77 Aligned_cols=123 Identities=17% Similarity=0.188 Sum_probs=102.3
Q ss_pred ceeeEEEEecCCcEEEEeCCCCeEEEEEccC-Cce--eeEEEecCCCeEEEEECC-CCCEEEEecCCCcEEEEEeCCc--
Q psy11518 13 HTASVRSVAATSKLAASSGADETVVLYDMVK-RKQ--SGALMQHEGTITCLKFTP-EGSHLISCSDDGSIAIFRVGSW-- 86 (139)
Q Consensus 13 ~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~-~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~-- 86 (139)
+...+.++.+....+++++.++.|++||+.+ +.. ......|...+.+++|+| +++++++++.||.+++|+++..
T Consensus 149 ~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~ 228 (342)
T 1yfq_A 149 VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGD 228 (342)
T ss_dssp SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCC
T ss_pred eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCc
Confidence 6678888888666699999999999999988 543 334446788999999999 9999999999999999999876
Q ss_pred ----eEEEEEEeCCCC--------cceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 87 ----QLEKLFKKAHKG--------TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 87 ----~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.....+ ..+.. .+|.+++|+|++++|++++.||.|++||+++++.+..+
T Consensus 229 ~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 229 DYNSSKRFAF-RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNF 289 (342)
T ss_dssp STTCTTCEEE-ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred ccccccceee-ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhh
Confidence 555555 33322 24999999999999999999999999999999887654
No 120
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.84 E-value=4.6e-19 Score=117.33 Aligned_cols=123 Identities=18% Similarity=0.316 Sum_probs=104.0
Q ss_pred ecceeeEEEEec---CCcEEEEeCCCCeEEEEEccCCceeeEEE-------------ecCCCeEEEEECC-CCCEEEEec
Q psy11518 11 HSHTASVRSVAA---TSKLAASSGADETVVLYDMVKRKQSGALM-------------QHEGTITCLKFTP-EGSHLISCS 73 (139)
Q Consensus 11 ~~~~~~v~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~~l~~~~ 73 (139)
.+|...|.++.| ++++|++|+.||.|++||+.+++....+. +|...|.+++|+| +++++++++
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 357778887776 78999999999999999999886665543 4899999999999 788999999
Q ss_pred CCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccC---CcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS---GKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 74 ~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.|+.|++||+.+++....+. +... +.+++|+|. +.++++++.|+.|++||+++++.+..+
T Consensus 120 ~d~~i~iwd~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~ 182 (408)
T 4a11_B 120 FDKTLKVWDTNTLQTADVFN--FEET-VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHIL 182 (408)
T ss_dssp TTSEEEEEETTTTEEEEEEE--CSSC-EEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEE
T ss_pred CCCeEEEeeCCCCccceecc--CCCc-eeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeee
Confidence 99999999999998888774 3333 889999984 449999999999999999988776654
No 121
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.83 E-value=9.7e-19 Score=115.53 Aligned_cols=122 Identities=12% Similarity=0.127 Sum_probs=94.5
Q ss_pred ceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeE--EEecCCCeEEEEECCCCCEEEEecCCC----cEEEEEeC
Q psy11518 13 HTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGA--LMQHEGTITCLKFTPEGSHLISCSDDG----SIAIFRVG 84 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~~~d~~ 84 (139)
|...|.++.| +++++++++.+ .+.+|+..+++.+.. ...|...|.+++|+|+++++++++.++ .+..|++.
T Consensus 175 ~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~ 253 (365)
T 4h5i_A 175 TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIK 253 (365)
T ss_dssp CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEE
T ss_pred CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccc
Confidence 4455666665 99999999855 466677677765543 346888899999999999999998877 58889987
Q ss_pred CceEEE--EEE-eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 85 SWQLEK--LFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 85 ~~~~~~--~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
...... ... ..+... |.+++|+|++++|++|+.|+.|+|||+++++++..+
T Consensus 254 ~~~~~~~~~~~~~~~~~~-V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 254 SGNTSVLRSKQVTNRFKG-ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp TTEEEEEEEEEEESSCSC-EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred cceecceeeeeecCCCCC-eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe
Confidence 765422 111 334444 999999999999999999999999999999887654
No 122
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.81 E-value=5e-18 Score=110.56 Aligned_cols=124 Identities=19% Similarity=0.126 Sum_probs=95.7
Q ss_pred cceeeEEEEecCCcEEEEeC--CCCeEEEEEc-cCCceeeEEEecCCCeEEEEECC---CCCEEEEecCCCcEEEEEeCC
Q psy11518 12 SHTASVRSVAATSKLAASSG--ADETVVLYDM-VKRKQSGALMQHEGTITCLKFTP---EGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 12 ~~~~~v~~~~~~~~~l~~~~--~~~~v~i~~~-~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~~d~~~ 85 (139)
++...+..+ .+++++.+++ .|+.|++|++ .+++.+..+.+|...+..++|+| ++..|++++.|++|++||+.+
T Consensus 134 g~~~~v~~l-~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~T 212 (356)
T 2w18_A 134 GNIKAVLGL-TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKT 212 (356)
T ss_dssp EEEEEEEEE-TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTT
T ss_pred CCeEEEEec-CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCC
Confidence 445555554 3566666644 6999999999 45888888889999999999999 779999999999999999999
Q ss_pred ceEEEEEEeCCC-CcceeEEEEccCCcEE------------EEEcCCCeEEEEEcCCCceeEEE
Q psy11518 86 WQLEKLFKKAHK-GTAVNHISIHPSGKLA------------LSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 86 ~~~~~~~~~~~~-~~~v~~~~~~~~~~~l------------~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
++.+..+...+. ...+.+++|+|+++++ ++|+.|++|++||..+++.+..+
T Consensus 213 Gk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 213 GQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp CCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE
T ss_pred CcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence 999998842221 2237788999999987 55778999999999999876543
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.81 E-value=1e-18 Score=120.09 Aligned_cols=110 Identities=8% Similarity=0.138 Sum_probs=89.8
Q ss_pred EEEEe--cCCcEEEEeCCCCeEEEEEccCCce-------eeEE----EecCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 17 VRSVA--ATSKLAASSGADETVVLYDMVKRKQ-------SGAL----MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 17 v~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~-------~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
+.+++ |+|++|++|+.||+|++||+.++.. +.++ .+|...|.+++|+|++ +++++.|+.+++||+
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~ 209 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTV 209 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECC
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEEC
Confidence 55555 5999999999999999999988753 5666 4677899999999999 788888999999999
Q ss_pred CCceE---EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 84 GSWQL---EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 84 ~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
.++.. ...+...|... |.+++|+ ++.+++++ ++.|++||+.+++.
T Consensus 210 ~~~~~~~~~~tL~~~h~~~-V~svaFs--g~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 210 SASSHQPVSRMIQNASRRK-ITDLKIV--DYKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp CSSSSCCCEEEEECCCSSC-CCCEEEE--TTEEEEEC-SSEEEEEETTTTEE
T ss_pred CCCccccceeeecccccCc-EEEEEEE--CCEEEEEe-CCeEEEEECCCCeE
Confidence 88773 23443345444 9999999 68888887 69999999998776
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.80 E-value=6.8e-17 Score=106.89 Aligned_cols=117 Identities=12% Similarity=0.167 Sum_probs=96.1
Q ss_pred EEEEec--CCcEE-EEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCcEEEEEeCCceEEEEE
Q psy11518 17 VRSVAA--TSKLA-ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 17 v~~~~~--~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~ 92 (139)
+.++.+ +++.+ ++++.++.|++||+.+++.+..+..+. .+.+++|+|++++++ ++..++.|.+||+.+++....+
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~ 112 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV 112 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE
Confidence 455554 88766 677799999999999999888887655 899999999999875 5566799999999999888777
Q ss_pred EeCCCCcceeEEEEccCCcEE-EEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 93 KKAHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
. . ... +.+++|+|+++.+ ++++.++.|++||+++++.+..+.
T Consensus 113 ~-~-~~~-~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 155 (391)
T 1l0q_A 113 K-T-GKS-PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVS 155 (391)
T ss_dssp E-C-SSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred e-C-CCC-cceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEe
Confidence 3 2 233 8999999999977 688889999999999988776654
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.79 E-value=2.2e-17 Score=110.53 Aligned_cols=122 Identities=11% Similarity=0.051 Sum_probs=103.7
Q ss_pred cceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCcEEEEEeCCceE
Q psy11518 12 SHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 12 ~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~ 88 (139)
+|...+.++.+ ++.++++++.|+.|++||+.+++.+..+..|...+.+++|+|+++.++ +++.++.|.+||+++++.
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE 246 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE
Confidence 45667777776 888999999999999999999999999988999999999999998874 556899999999999888
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEc--------CCCeEEEEEcCCCceeEEE
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVG--------KDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------~d~~i~i~d~~~~~~~~~~ 136 (139)
...+. .... +.+++|+|+++++++++ .|+.|++||+++++.+..+
T Consensus 247 ~~~~~--~~~~-~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~ 299 (433)
T 3bws_A 247 IRKTD--KIGL-PRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI 299 (433)
T ss_dssp EEECC--CCSE-EEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE
T ss_pred EEEec--CCCC-ceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec
Confidence 77662 2333 89999999999998887 5889999999998776554
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.79 E-value=8.4e-18 Score=112.54 Aligned_cols=117 Identities=10% Similarity=0.075 Sum_probs=97.2
Q ss_pred EEEecCCcEEEEeCCCCeEEEEEccCCceee-----EEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEE
Q psy11518 18 RSVAATSKLAASSGADETVVLYDMVKRKQSG-----ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 92 (139)
.++.+++.++++++.++.|++||+.+++... .+.+|...+.+++|+|+++++++++.|+.|++||+++++....+
T Consensus 128 ~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~ 207 (433)
T 3bws_A 128 VRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATV 207 (433)
T ss_dssp CEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEE
T ss_pred EEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEE
Confidence 3444577788888899999999999988776 33468889999999999999999999999999999998888777
Q ss_pred EeCCCCcceeEEEEccCCcEEE-EEcCCCeEEEEEcCCCceeEEE
Q psy11518 93 KKAHKGTAVNHISIHPSGKLAL-SVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
. .+... +.+++|+|+++.++ +++.|+.|++||+++++.+..+
T Consensus 208 ~-~~~~~-~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~ 250 (433)
T 3bws_A 208 D-LTGKW-SKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT 250 (433)
T ss_dssp E-CSSSS-EEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred c-CCCCC-eeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe
Confidence 3 44444 89999999999775 5558999999999998876654
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.77 E-value=4.6e-16 Score=102.91 Aligned_cols=117 Identities=11% Similarity=0.147 Sum_probs=95.7
Q ss_pred EEEEecCCcEE-EEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec---CCCcEEEEEeCCceEEEEE
Q psy11518 17 VRSVAATSKLA-ASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS---DDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 17 v~~~~~~~~~l-~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~~~d~~~~~~~~~~ 92 (139)
..++.++++.+ ++++.++.|++||+.+++....+. +...+.+++|+|+++++++++ .++.|.+||+.+++....+
T Consensus 162 ~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~ 240 (391)
T 1l0q_A 162 GIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI 240 (391)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEE
Confidence 33444578776 678889999999999988777765 456789999999999988887 6899999999999887777
Q ss_pred EeCCCCcceeEEEEccCCcEE-EEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 93 KKAHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.. +. . +.+++|+|+++++ ++++.|+.|++||+.+++.+..+.
T Consensus 241 ~~-~~-~-~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~ 283 (391)
T 1l0q_A 241 PV-GP-D-PAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMA 283 (391)
T ss_dssp EC-CS-S-EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ec-CC-C-ccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEE
Confidence 33 22 3 7899999999877 677889999999999998877654
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.77 E-value=3.8e-17 Score=110.27 Aligned_cols=119 Identities=15% Similarity=0.136 Sum_probs=94.6
Q ss_pred ecceeeEEEEec--C-CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 11 HSHTASVRSVAA--T-SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 11 ~~~~~~v~~~~~--~-~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
.+|...|.++.| + +.++++++.|+.|++||++++.......+|...|.+++|+|++++|++|+.||.|++||.+ +.
T Consensus 146 ~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~ 224 (434)
T 2oit_A 146 KDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ 224 (434)
T ss_dssp CSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC
T ss_pred CCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc
Confidence 357778888887 4 7899999999999999999987776777888999999999999999999999999999998 55
Q ss_pred EEEEEEeCCC-----CcceeEEEEccCCcEEEEEc-CCC------eEEEEEcCCC
Q psy11518 88 LEKLFKKAHK-----GTAVNHISIHPSGKLALSVG-KDK------TLRTWNLVKG 130 (139)
Q Consensus 88 ~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~-~d~------~i~i~d~~~~ 130 (139)
....+..... ...+.+++|++++.++++.+ .+| .+++|++++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 225 EKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 4444422111 12489999999988775432 332 3899999865
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.71 E-value=4.4e-15 Score=99.65 Aligned_cols=116 Identities=15% Similarity=0.166 Sum_probs=89.6
Q ss_pred ceeeEEEEec--CCcEEEEeCCCC---eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCc--EEEEEeC
Q psy11518 13 HTASVRSVAA--TSKLAASSGADE---TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGS--IAIFRVG 84 (139)
Q Consensus 13 ~~~~v~~~~~--~~~~l~~~~~~~---~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~~~d~~ 84 (139)
|...+.++.| +++.|+.++.++ .|++||+.+++.. .+..|...+.+++|+|+++.|+ +++.++. |.+||+.
T Consensus 177 ~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 177 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA 255 (415)
T ss_dssp ESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence 4445555554 999999988775 9999999988765 5667888899999999999887 6666655 9999998
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCCcEEEEEcC-CC--eEEEEEcCCCce
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-DK--TLRTWNLVKGRS 132 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~i~d~~~~~~ 132 (139)
+++... + ..+.. .+.+++|+|+|++|++++. ++ .|.+||+.+++.
T Consensus 256 ~~~~~~-l-~~~~~-~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~ 303 (415)
T 2hqs_A 256 SGQIRQ-V-TDGRS-NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP 303 (415)
T ss_dssp TCCEEE-C-CCCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC
T ss_pred CCCEEe-C-cCCCC-cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE
Confidence 877633 3 23343 3899999999998888775 44 688889987764
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.71 E-value=1.4e-15 Score=105.23 Aligned_cols=117 Identities=8% Similarity=0.041 Sum_probs=99.7
Q ss_pred EEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe--CCceEEEEEEe
Q psy11518 17 VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV--GSWQLEKLFKK 94 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~--~~~~~~~~~~~ 94 (139)
+..+.+++.+++++..+++|.+||..+++.+.++..+.. +..++|+|+++++++++.|+.|.+||+ .+++.+..+.
T Consensus 142 ~~~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~- 219 (543)
T 1nir_A 142 LNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK- 219 (543)
T ss_dssp CSCCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE-
T ss_pred ccccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe-
Confidence 334556788999999999999999999999999884433 889999999999999999999999999 7888877773
Q ss_pred CCCCcceeEEEEcc----CCcEEEEEcC-CCeEEEEEcCCCceeEEEe
Q psy11518 95 AHKGTAVNHISIHP----SGKLALSVGK-DKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 95 ~~~~~~v~~~~~~~----~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~ 137 (139)
.... +.+++|+| +|+++++++. ++.|.+||..+++.+..+.
T Consensus 220 -~g~~-p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 220 -IGIE-ARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp -CCSE-EEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred -cCCC-cceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec
Confidence 2333 89999999 9999998884 8999999999999887765
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.66 E-value=5.7e-15 Score=99.10 Aligned_cols=106 Identities=12% Similarity=0.137 Sum_probs=83.6
Q ss_pred CcEEEEeCCC------CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCC---cEEEEEeCCceEEEEEEe
Q psy11518 24 SKLAASSGAD------ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG---SIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 24 ~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~~~d~~~~~~~~~~~~ 94 (139)
+..++.++.+ +.|++||+. +.....+..|...+.+++|+|++++++.++.++ .|.+||+.+++.....
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~-- 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVA-- 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEE--
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEee--
Confidence 5556555543 799999986 455677888999999999999999999988775 8999999988876433
Q ss_pred CCCCcceeEEEEccCCcEEE-EEcCCC--eEEEEEcCCCcee
Q psy11518 95 AHKGTAVNHISIHPSGKLAL-SVGKDK--TLRTWNLVKGRSA 133 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l~-~~~~d~--~i~i~d~~~~~~~ 133 (139)
.+... +.+++|+|+|+.|+ +++.++ .|.+||+++++..
T Consensus 220 ~~~~~-~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~ 260 (415)
T 2hqs_A 220 SFPRH-NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR 260 (415)
T ss_dssp CCSSC-EEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE
T ss_pred cCCCc-ccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE
Confidence 34444 89999999999887 666554 4999999987653
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.63 E-value=1.7e-13 Score=89.24 Aligned_cols=120 Identities=15% Similarity=0.111 Sum_probs=95.9
Q ss_pred EEEecCCcEEEEeC--CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeC
Q psy11518 18 RSVAATSKLAASSG--ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA 95 (139)
Q Consensus 18 ~~~~~~~~~l~~~~--~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 95 (139)
..++++++.+++++ .++.|.+||..+++.+..+..+...+..++|+|+++++++++.++.|.+||..+++....+...
T Consensus 146 ~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~ 225 (353)
T 3vgz_A 146 LVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLL 225 (353)
T ss_dssp EEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred EEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcC
Confidence 34455888766665 5789999999999888888756666789999999999999999999999999999988777442
Q ss_pred CC--CcceeEEEEccCCcEEEEEc-CCCeEEEEEcCCCceeEEEe
Q psy11518 96 HK--GTAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 96 ~~--~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~ 137 (139)
.. ...+..++|+|+++++++++ .++.|.+||+.+++.+..+.
T Consensus 226 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 226 DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 21 22377899999999776665 45999999999998877654
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.63 E-value=1.5e-13 Score=88.81 Aligned_cols=78 Identities=9% Similarity=0.032 Sum_probs=65.9
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
.+..++|+|++++++++ ++.|.+||+.+++....+... . .+.+++|+|+++++++++.++.|.+||+.+++.+..
T Consensus 242 ~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~--~-~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~ 316 (337)
T 1pby_B 242 FYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP--H-SYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQ 316 (337)
T ss_dssp CEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS--S-CCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEE
T ss_pred ceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC--C-ceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEE
Confidence 45578999999998888 689999999999887777433 2 278899999999999999999999999999998877
Q ss_pred Eec
Q psy11518 136 TNL 138 (139)
Q Consensus 136 ~~~ 138 (139)
+.+
T Consensus 317 ~~~ 319 (337)
T 1pby_B 317 VDL 319 (337)
T ss_dssp EEC
T ss_pred EEc
Confidence 653
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.63 E-value=2.1e-13 Score=88.83 Aligned_cols=118 Identities=7% Similarity=0.030 Sum_probs=94.0
Q ss_pred eEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEe----cCCCeEEEEECCCCCEEEEec-CCCcEEEEEeCCceEEE
Q psy11518 16 SVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQ----HEGTITCLKFTPEGSHLISCS-DDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~~~ 90 (139)
....+.++++.+++++.++.|.+||..+++.+..+.. +...+..++|+|++++++.++ .++.|.+||..+++...
T Consensus 188 ~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 188 TGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp CCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred ceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 3445666999999999999999999999988877764 455678899999999776555 45899999999998888
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEE-cCCCeEEEEEcCCCceeEEEe
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSV-GKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.+.... ...++|+|++++++++ ..++.|.+||+.+++.+..+.
T Consensus 268 ~~~~~~----~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~ 311 (353)
T 3vgz_A 268 KVAAPE----SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD 311 (353)
T ss_dssp EEECSS----CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred EEEcCC----CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence 774322 3569999999965554 479999999999998877654
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.61 E-value=3.1e-13 Score=93.58 Aligned_cols=130 Identities=11% Similarity=0.097 Sum_probs=100.9
Q ss_pred eeEEEEEeecceeeEEEEecCCcEEEEeCCCCeEEEEEc--cCCceeeEEEecCCCeEEEEECC----CCCEEEEecC-C
Q psy11518 3 TLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDM--VKRKQSGALMQHEGTITCLKFTP----EGSHLISCSD-D 75 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~~~-d 75 (139)
+.+.++.. ++......++++++++++++.++.|.+||+ .+++.+.++.. ...+..++|+| +++++++++. +
T Consensus 170 ~~~~~i~~-g~~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~ 247 (543)
T 1nir_A 170 KIVKVIDT-GYAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWP 247 (543)
T ss_dssp CEEEEEEC-STTEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEES
T ss_pred eEEEEEec-CcccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccC
Confidence 34455543 333444556679999999999999999999 88888888874 45678999999 9999988874 8
Q ss_pred CcEEEEEeCCceEEEEEEeC---------CCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCCceeE
Q psy11518 76 GSIAIFRVGSWQLEKLFKKA---------HKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 76 ~~i~~~d~~~~~~~~~~~~~---------~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
+.|.+||..+++.+..+... |....+..+.++|++. ++++...++.|.+||+.+.+.+.
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~ 316 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT 316 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCE
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcce
Confidence 99999999999988877432 2233488999999765 56677889999999998865443
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.60 E-value=1.2e-13 Score=89.59 Aligned_cols=112 Identities=11% Similarity=0.156 Sum_probs=81.8
Q ss_pred EEEEecCCcEEEEeCCC-CeEEEEEcc--CCc--eeeEEEecCCCeEEEEECCCCCEEEEec-CCCcEEEEEeCCc---e
Q psy11518 17 VRSVAATSKLAASSGAD-ETVVLYDMV--KRK--QSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFRVGSW---Q 87 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~~-~~v~i~~~~--~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~---~ 87 (139)
..+++++++++++++.+ +.|.+|++. +++ .+..+..+. .+..++|+|+++++++++ .++.|.+||+..+ .
T Consensus 42 ~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~ 120 (343)
T 1ri6_A 42 PMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVG 120 (343)
T ss_dssp CEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEE
T ss_pred eEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccc
Confidence 34555689888877766 999999997 444 334454444 778999999999876555 5888999999433 3
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEc-CCCeEEEEEcCC-Cce
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLVK-GRS 132 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~-~~~ 132 (139)
....+ .... .+.+++|+|+++++++++ .++.|.+||+.+ ++.
T Consensus 121 ~~~~~--~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 121 VVDVV--EGLD-GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp EEEEE--CCCT-TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred ccccc--cCCC-CceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 33333 2222 388899999999887776 899999999987 554
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.60 E-value=7.1e-13 Score=85.82 Aligned_cols=113 Identities=9% Similarity=0.124 Sum_probs=85.2
Q ss_pred EEEEecCCcEEEEe-CCCCeEEEEEccCCce-eeEEEecCCCeEEEEECCCCCEEEEecCCC---cEEEEEeCCceEEEE
Q psy11518 17 VRSVAATSKLAASS-GADETVVLYDMVKRKQ-SGALMQHEGTITCLKFTPEGSHLISCSDDG---SIAIFRVGSWQLEKL 91 (139)
Q Consensus 17 v~~~~~~~~~l~~~-~~~~~v~i~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~~~d~~~~~~~~~ 91 (139)
..+++++++.++++ ..++.|.+||+.+++. ...+..+.....+++|+|++++++++..++ .|.+||+.+++....
T Consensus 44 ~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEE
T ss_pred eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEE
Confidence 45555688865554 4588999999999887 667776666655599999999998665553 899999999988777
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEE-cCCCe-EEEEEcCCCce
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSV-GKDKT-LRTWNLVKGRS 132 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~-i~i~d~~~~~~ 132 (139)
+.. ... +.+++|+|++++++++ ..++. +.+|++.....
T Consensus 124 ~~~--~~~-~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~ 163 (331)
T 3u4y_A 124 IPI--PYD-AVGIAISPNGNGLILIDRSSANTVRRFKIDADGV 163 (331)
T ss_dssp EEC--CTT-EEEEEECTTSSCEEEEEETTTTEEEEEEECTTCC
T ss_pred EEC--CCC-ccceEECCCCCEEEEEecCCCceEEEEEECCCCc
Confidence 632 222 6899999999865554 55678 99999876443
No 138
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.57 E-value=1.6e-13 Score=88.78 Aligned_cols=113 Identities=9% Similarity=0.052 Sum_probs=89.6
Q ss_pred cEEEEeCCCCeEEEEEccCCceeeEEEecCC--CeEEEEECCCCCEE-EEecCCCcEEEEEeCCceEEEEEEeCCC---C
Q psy11518 25 KLAASSGADETVVLYDMVKRKQSGALMQHEG--TITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAHK---G 98 (139)
Q Consensus 25 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~---~ 98 (139)
+++++++.++.|.+||+.+++.+..+..... .+..++|+|+++.+ +++..++.|.+||+.+++....+..... .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 5788999999999999999988877764332 46889999999765 5666788999999999988877744331 1
Q ss_pred cceeEEEEccCCcEEEEEc------------CCCeEEEEEcCCCceeEEEe
Q psy11518 99 TAVNHISIHPSGKLALSVG------------KDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 99 ~~v~~~~~~~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~ 137 (139)
..+..++|+|++++++++. .++.|.+||+.+++.+..+.
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~ 132 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFE 132 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEe
Confidence 1367899999999888885 57999999999988776554
No 139
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.57 E-value=6.2e-14 Score=99.57 Aligned_cols=112 Identities=14% Similarity=0.218 Sum_probs=87.9
Q ss_pred EEEecCCcEEEEeCC-CC-----eEEEEEccCCceeeEEEecCC------------------------CeEEEEECCCCC
Q psy11518 18 RSVAATSKLAASSGA-DE-----TVVLYDMVKRKQSGALMQHEG------------------------TITCLKFTPEGS 67 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~-~~-----~v~i~~~~~~~~~~~~~~~~~------------------------~v~~~~~~~~~~ 67 (139)
..+++||+.|++++. ++ .|.+||+.+++....+..+.. .+..++|+|+|+
T Consensus 42 ~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~ 121 (741)
T 2ecf_A 42 PKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ 121 (741)
T ss_dssp EEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS
T ss_pred ceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC
Confidence 344559999999887 87 999999999887666654432 278899999999
Q ss_pred EEEEecCCCcEEEEEeCCc---eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 68 HLISCSDDGSIAIFRVGSW---QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 68 ~l~~~~~d~~i~~~d~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
++++++. +.|.+||+.++ .... + ..+.. .+..++|+|||++|+.++. +.|.+||+.+++...
T Consensus 122 ~l~~~~~-~~i~~~d~~~~~~~~~~~-l-~~~~~-~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 122 RLLFPLG-GELYLYDLKQEGKAAVRQ-L-THGEG-FATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQ 186 (741)
T ss_dssp EEEEEET-TEEEEEESSSCSTTSCCB-C-CCSSS-CEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEE
T ss_pred EEEEEeC-CcEEEEECCCCCcceEEE-c-ccCCc-ccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEE
Confidence 9998876 89999999887 4432 2 23333 3899999999999998874 589999999876654
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.56 E-value=3.3e-13 Score=87.42 Aligned_cols=112 Identities=7% Similarity=0.059 Sum_probs=86.6
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec-CCCcEEEEEeCCceE-EEEEEeCCCCcc
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFRVGSWQL-EKLFKKAHKGTA 100 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~~~~-~~~~~~~~~~~~ 100 (139)
.+..++++..++.|.+||+.+++.+..+..+...+ .++|+|+++++++++ .++.|.+||..+++. ...+. .+. .+
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~-~~ 85 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQ-EGQ-SS 85 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEE-ECS-SC
T ss_pred CCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecc-cCC-CC
Confidence 34557888899999999999999888877666666 999999999666554 488999999998886 55442 222 32
Q ss_pred eeEEEEccCCcEEEEEcCCC---eEEEEEcCCCceeEEEe
Q psy11518 101 VNHISIHPSGKLALSVGKDK---TLRTWNLVKGRSAYITN 137 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~ 137 (139)
..+++|+|++++++++..++ .|.+||+.+++.+..+.
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~ 125 (331)
T 3u4y_A 86 MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP 125 (331)
T ss_dssp CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE
T ss_pred ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE
Confidence 34499999999998655553 89999999998876654
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.56 E-value=8.7e-13 Score=85.45 Aligned_cols=110 Identities=15% Similarity=0.213 Sum_probs=78.9
Q ss_pred EEEecCCcEEEEe-CCCCeEEEEEcc---CCceeeEEEecCCCeEEEEECCCCCEEEEec-CCCcEEEEEeCC-ceEEE-
Q psy11518 18 RSVAATSKLAASS-GADETVVLYDMV---KRKQSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFRVGS-WQLEK- 90 (139)
Q Consensus 18 ~~~~~~~~~l~~~-~~~~~v~i~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~~-~~~~~- 90 (139)
.+++++++.++++ ..++.|.+||+. ..+....+..+ ..+.+++|+|+++++++++ .++.|.+||+.+ ++...
T Consensus 89 ~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~ 167 (343)
T 1ri6_A 89 ISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQ 167 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE
T ss_pred EEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeee
Confidence 3455588877555 458899999994 33444444433 4578999999999887776 889999999987 65432
Q ss_pred ---EEEeCCCCcceeEEEEccCCcEEEEE-cCCCeEEEEEcCC
Q psy11518 91 ---LFKKAHKGTAVNHISIHPSGKLALSV-GKDKTLRTWNLVK 129 (139)
Q Consensus 91 ---~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~ 129 (139)
.. ....+..+..++|+|++++++++ ..++.+.+||+..
T Consensus 168 ~~~~~-~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 168 DPAEV-TTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp EEEEE-ECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred ccccc-ccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 22 22233348889999999976554 5789999999953
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.54 E-value=4.5e-13 Score=84.88 Aligned_cols=115 Identities=17% Similarity=0.181 Sum_probs=85.2
Q ss_pred EEecCCcEEE-EeCCCCeEEEEEccC-CceeeEEEecCCCeEEEEECCCCCEEEEec-CCCcEEEEEeC-CceEEEEEEe
Q psy11518 19 SVAATSKLAA-SSGADETVVLYDMVK-RKQSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFRVG-SWQLEKLFKK 94 (139)
Q Consensus 19 ~~~~~~~~l~-~~~~~~~v~i~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~-~~~~~~~~~~ 94 (139)
+++++++.++ ++..++.+.+|++.. ......+..+...+.++.|+|+++.++.++ .++.+.+|++. .+.....+ .
T Consensus 135 ~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~-~ 213 (297)
T 2ojh_A 135 GWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI-T 213 (297)
T ss_dssp EECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC-C
T ss_pred EECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE-e
Confidence 4455888776 777889999999643 233455566778899999999999887655 58899999986 34444444 2
Q ss_pred CCCCcceeEEEEccCCcEEEEEcCC-----------CeEEEEEcCCCceeEE
Q psy11518 95 AHKGTAVNHISIHPSGKLALSVGKD-----------KTLRTWNLVKGRSAYI 135 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l~~~~~d-----------~~i~i~d~~~~~~~~~ 135 (139)
.+. ..+..++|+|++++|++++.+ +.|.+||+.+++....
T Consensus 214 ~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~ 264 (297)
T 2ojh_A 214 DSA-YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETL 264 (297)
T ss_dssp CCS-EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEE
T ss_pred cCC-cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceee
Confidence 333 348899999999999888765 5699999998876443
No 143
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.54 E-value=1.5e-13 Score=89.35 Aligned_cols=111 Identities=11% Similarity=0.105 Sum_probs=88.7
Q ss_pred ecCCcEEEEeCCCCeEEEEEccCCceeeEEEecC-CCeEEEEECCCCCEE-EEecCCCcEEEEEeCCceEEEEEEeCCC-
Q psy11518 21 AATSKLAASSGADETVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKAHK- 97 (139)
Q Consensus 21 ~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~~~- 97 (139)
..++.++++++.++.|.+||+.+++.+..+..+. ..+..++|+|+++.+ ++...++.|.+||+.+++....+...+.
T Consensus 8 ~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~ 87 (349)
T 1jmx_B 8 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVP 87 (349)
T ss_dssp CTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCST
T ss_pred cCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccc
Confidence 3477889999999999999999998888777543 146789999999865 4666789999999999988777743332
Q ss_pred ---CcceeEEEEccCCcEEEEEcCC------------CeEEEEEcCCCc
Q psy11518 98 ---GTAVNHISIHPSGKLALSVGKD------------KTLRTWNLVKGR 131 (139)
Q Consensus 98 ---~~~v~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~ 131 (139)
...+..++|+|+++++++++.+ +.|.+||+.+++
T Consensus 88 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 88 GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 2236789999999999988865 899999998743
No 144
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.54 E-value=8.9e-14 Score=96.59 Aligned_cols=112 Identities=11% Similarity=0.075 Sum_probs=89.6
Q ss_pred eEEEEecCCcEEEEeCCC----CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCC--cEEEEEeCCceEE
Q psy11518 16 SVRSVAATSKLAASSGAD----ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG--SIAIFRVGSWQLE 89 (139)
Q Consensus 16 ~v~~~~~~~~~l~~~~~~----~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~ 89 (139)
.-..+++||+.++.++.+ +.|.+||+.+++.. .+..|...+..++|+|+|+.++++..++ .|.+||+.+++..
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 334556799999987766 78999999887654 6677888899999999999999888888 8999999988877
Q ss_pred EEEEeCCCCcceeEEE--------EccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 90 KLFKKAHKGTAVNHIS--------IHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~--------~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
.+ ..+... +..++ |+|||.++++++.|+.+++|++ ++.+
T Consensus 232 -~~-~~~~~~-~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 232 -DL-ELPSKD-FSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp -EC-CCSCSH-HHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEE
T ss_pred -Ec-cCCCcC-hhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCee
Confidence 43 333333 55556 9999988899999999999999 5443
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.54 E-value=1.1e-14 Score=103.13 Aligned_cols=113 Identities=8% Similarity=0.075 Sum_probs=87.3
Q ss_pred ecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCC---CeEEEEECCCCCEEEEecCC---------CcEEEEEeCCceE
Q psy11518 21 AATSKLAASSGADETVVLYDMVKRKQSGALMQHEG---TITCLKFTPEGSHLISCSDD---------GSIAIFRVGSWQL 88 (139)
Q Consensus 21 ~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------~~i~~~d~~~~~~ 88 (139)
+++|+++++ +.|+.|++||+.+++....+..|.. .+..++|+|+|+++++++.+ +.+.+||+.+++.
T Consensus 25 spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 103 (723)
T 1xfd_A 25 ISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP 103 (723)
T ss_dssp SSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC
T ss_pred cCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce
Confidence 348887765 7899999999999988777776654 38999999999999988764 6788999998876
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEE
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
............+..++|+|||++|+.++. +.|++||+.+++....
T Consensus 104 ~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~ 149 (723)
T 1xfd_A 104 QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRV 149 (723)
T ss_dssp EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEE
T ss_pred EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEE
Confidence 322211122223788999999999998886 7999999998876543
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.54 E-value=4.4e-13 Score=98.69 Aligned_cols=114 Identities=9% Similarity=0.125 Sum_probs=92.4
Q ss_pred eEEEEec-CCcEEEEeCCCCeEE-EEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 16 SVRSVAA-TSKLAASSGADETVV-LYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 16 ~v~~~~~-~~~~l~~~~~~~~v~-i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.+..+.| +++.++.++.+..+. +|++.+++... +..|...+..++|+|+++++++++.++.|.+||+.+++.....
T Consensus 339 ~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~- 416 (1045)
T 1k32_A 339 RYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE- 416 (1045)
T ss_dssp EEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-
T ss_pred eEEeeeEcCCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec-
Confidence 5556666 677888888788888 99987775443 3377788999999999999999999999999999998877665
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCCC----------eEEEEEcCCCce
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKDK----------TLRTWNLVKGRS 132 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d~----------~i~i~d~~~~~~ 132 (139)
..+... +.+++|+|||++|++++.++ .|++||+.+++.
T Consensus 417 ~~~~~~-v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~ 464 (1045)
T 1k32_A 417 RSREAM-ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKI 464 (1045)
T ss_dssp ECSSSC-CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEE
T ss_pred cCCCCC-ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcE
Confidence 344444 88999999999998887644 899999998763
No 147
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.54 E-value=1.8e-12 Score=84.26 Aligned_cols=78 Identities=14% Similarity=0.075 Sum_probs=65.0
Q ss_pred CeEEEEECC-CCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 56 TITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 56 ~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
.+..++|+| ++++++++ ++.|.+||+.+++....+...+ . +.+++|+|++++|++++.++.|.+||+++++.+.
T Consensus 256 ~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~--~-~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~ 330 (349)
T 1jmx_B 256 LYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDH--T-YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVK 330 (349)
T ss_dssp CEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSS--C-CCEEEECSSSSCEEEESBSSEEEEEETTTTEEEE
T ss_pred cceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCC--C-ccceEECCCCCEEEEecCCCeEEEEeccccceee
Confidence 345677889 99998888 7899999999998887774332 2 7789999999988888889999999999999887
Q ss_pred EEec
Q psy11518 135 ITNL 138 (139)
Q Consensus 135 ~~~~ 138 (139)
.+.+
T Consensus 331 ~~~~ 334 (349)
T 1jmx_B 331 NIKL 334 (349)
T ss_dssp EEEC
T ss_pred eeec
Confidence 7654
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.52 E-value=2.5e-13 Score=96.09 Aligned_cols=113 Identities=12% Similarity=0.168 Sum_probs=85.4
Q ss_pred EEEecCCcEEEEeCCCCeEEEEEccC-----CceeeEEEecCCC--------------eEEEEECCCCCEEEEec-----
Q psy11518 18 RSVAATSKLAASSGADETVVLYDMVK-----RKQSGALMQHEGT--------------ITCLKFTPEGSHLISCS----- 73 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~v~i~~~~~-----~~~~~~~~~~~~~--------------v~~~~~~~~~~~l~~~~----- 73 (139)
.+++++|+.|+.+ .++.|.+||+.+ ++.......+... +.++.|+|++++|+.++
T Consensus 126 ~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~ 204 (706)
T 2z3z_A 126 LDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSM 204 (706)
T ss_dssp CEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTT
T ss_pred CcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCC
Confidence 4566699999885 679999999988 7655433333332 47899999999999886
Q ss_pred ----------------------------CCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCC-----
Q psy11518 74 ----------------------------DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK----- 120 (139)
Q Consensus 74 ----------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----- 120 (139)
.+..|.+||+.+++.............+.+++|+|||++|++++.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 284 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNEC 284 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEE
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCee
Confidence 34679999999887655442222333489999999999999887665
Q ss_pred eEEEEEcCCCc
Q psy11518 121 TLRTWNLVKGR 131 (139)
Q Consensus 121 ~i~i~d~~~~~ 131 (139)
.|.+||+.+++
T Consensus 285 ~v~~~d~~~g~ 295 (706)
T 2z3z_A 285 KVNAYDAETGR 295 (706)
T ss_dssp EEEEEETTTCC
T ss_pred EEEEEECCCCc
Confidence 89999999983
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.52 E-value=1.2e-11 Score=80.68 Aligned_cols=113 Identities=13% Similarity=0.183 Sum_probs=78.5
Q ss_pred EEEEecCCcEEEEeC-CCCeEEEEEccC-Cc--eeeEEEec---------CCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 17 VRSVAATSKLAASSG-ADETVVLYDMVK-RK--QSGALMQH---------EGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 17 v~~~~~~~~~l~~~~-~~~~v~i~~~~~-~~--~~~~~~~~---------~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
-.++++++++|++++ .++.|.+|++.. +. .+..+... ...+.+++|+|+++.+++...++.|.+|++
T Consensus 90 ~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~ 169 (347)
T 3hfq_A 90 YVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNV 169 (347)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEE
Confidence 345566899887776 789999999963 22 22333221 124788999999996677777889999999
Q ss_pred C-CceEEEEEE-eCCCCcceeEEEEccCCcEEEE-EcCCCeEEEEEcCC
Q psy11518 84 G-SWQLEKLFK-KAHKGTAVNHISIHPSGKLALS-VGKDKTLRTWNLVK 129 (139)
Q Consensus 84 ~-~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~i~d~~~ 129 (139)
. ++....... ....+..+..++|+|+|+++++ ...++.+.+|++..
T Consensus 170 ~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 170 SDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp CTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 8 554432221 2223323788999999996655 56789999999874
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.52 E-value=3.3e-12 Score=83.80 Aligned_cols=114 Identities=17% Similarity=0.224 Sum_probs=80.0
Q ss_pred EEEecCCcEEEEeC-CCCeEEEEEccCCce--eeEEE---ecCCCeEEEEECCCCCEEEEecC--CCcEEEEEeC--Cce
Q psy11518 18 RSVAATSKLAASSG-ADETVVLYDMVKRKQ--SGALM---QHEGTITCLKFTPEGSHLISCSD--DGSIAIFRVG--SWQ 87 (139)
Q Consensus 18 ~~~~~~~~~l~~~~-~~~~v~i~~~~~~~~--~~~~~---~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~--~~~ 87 (139)
..++++++++++++ .++.|.+|++.+++. +..+. .+......++|+|++++++++.. ++.|.+|++. ++.
T Consensus 216 ~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~ 295 (361)
T 3scy_A 216 LIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT 295 (361)
T ss_dssp EEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC
T ss_pred EEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc
Confidence 44555888776665 689999999987744 22232 23345679999999998866555 4889999996 344
Q ss_pred E--EEEEEeCCCCcceeEEEEccCCcEEEEEc-CCCeEEEE--EcCCCceeE
Q psy11518 88 L--EKLFKKAHKGTAVNHISIHPSGKLALSVG-KDKTLRTW--NLVKGRSAY 134 (139)
Q Consensus 88 ~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~--d~~~~~~~~ 134 (139)
. ...+ .. +..+.+++|+|++++|++++ .++.|.+| |..+++...
T Consensus 296 ~~~~~~~--~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~ 344 (361)
T 3scy_A 296 LTKVGYQ--LT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTD 344 (361)
T ss_dssp EEEEEEE--EC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred EEEeeEe--cC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEee
Confidence 3 3333 22 33478999999999888877 67899996 555666543
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.52 E-value=3.7e-12 Score=83.13 Aligned_cols=114 Identities=10% Similarity=0.195 Sum_probs=81.3
Q ss_pred EEEecCCcEEEEeCC---CCeEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEec-CCCcEEEEEeC-Cce--E
Q psy11518 18 RSVAATSKLAASSGA---DETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFRVG-SWQ--L 88 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~---~~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~-~~~--~ 88 (139)
.+++++++ +++++. ++.|.+|++.+++ .+..+..+...+..++|+|+++++++++ .++.+.+|++. ++. .
T Consensus 45 ~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~ 123 (347)
T 3hfq_A 45 LALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTL 123 (347)
T ss_dssp EEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred EEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeee
Confidence 45566888 554443 6899999997765 3444455777788999999999888776 67899999996 333 2
Q ss_pred EEEEEeCCC-------CcceeEEEEccCCcEEEEEcCCCeEEEEEcC-CCce
Q psy11518 89 EKLFKKAHK-------GTAVNHISIHPSGKLALSVGKDKTLRTWNLV-KGRS 132 (139)
Q Consensus 89 ~~~~~~~~~-------~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~ 132 (139)
+..+..... ...+.+++|+|+++++++...++.|.+|++. +++.
T Consensus 124 ~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~ 175 (347)
T 3hfq_A 124 TDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQL 175 (347)
T ss_dssp EEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCE
T ss_pred cceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcE
Confidence 333311111 1237789999999977777778999999998 5543
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.51 E-value=4e-13 Score=95.49 Aligned_cols=100 Identities=15% Similarity=0.107 Sum_probs=77.2
Q ss_pred EEEecCCcEEEEeCCCCeEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeC
Q psy11518 18 RSVAATSKLAASSGADETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA 95 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 95 (139)
.++++||++|++++. +.|.+||+.++. ....+..|...+..++|+|+|++++.++ ++.|.+||+.+++..... ..
T Consensus 114 ~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~-~~ 190 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLT-AD 190 (741)
T ss_dssp CEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECC-CC
T ss_pred eEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEec-cC
Confidence 455569999998886 999999998873 4455667778899999999999998887 458999999988766544 22
Q ss_pred CCCc---------------ceeEEEEccCCcEEEEEcCCC
Q psy11518 96 HKGT---------------AVNHISIHPSGKLALSVGKDK 120 (139)
Q Consensus 96 ~~~~---------------~v~~~~~~~~~~~l~~~~~d~ 120 (139)
+... .+..++|+|||++|++++.|+
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 2211 136799999999999987665
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.51 E-value=6.5e-13 Score=97.84 Aligned_cols=116 Identities=9% Similarity=0.001 Sum_probs=92.6
Q ss_pred cceeeEEEE--ecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCC----------cEE
Q psy11518 12 SHTASVRSV--AATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG----------SIA 79 (139)
Q Consensus 12 ~~~~~v~~~--~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----------~i~ 79 (139)
++...+..+ +++++.|++++.++.|++||+.+++.......|...+..++|+|++++++.++.++ .|.
T Consensus 376 ~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~ 455 (1045)
T 1k32_A 376 ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIH 455 (1045)
T ss_dssp CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEE
T ss_pred CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEE
Confidence 343444444 45999999999999999999999988877778888899999999999998776644 899
Q ss_pred EEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 80 IFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 80 ~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
+||+.+++ ...+ ..+... +..++|+|+|+.|+.++.++...+|+....
T Consensus 456 l~d~~~g~-~~~l-~~~~~~-~~~~~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 456 VYDMEGRK-IFAA-TTENSH-DYAPAFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp EEETTTTE-EEEC-SCSSSB-EEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred EEECCCCc-EEEe-eCCCcc-cCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence 99999887 3333 334333 788999999999999998888888876543
No 154
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.50 E-value=1.6e-12 Score=82.27 Aligned_cols=111 Identities=10% Similarity=0.064 Sum_probs=79.8
Q ss_pred ceeeEEEEe--cCCcEEEEeCCCCeEEEEEccC-CceeeEEEec-CCCeEEEEECCCCCEEEEec--CCCcEEEEEe--C
Q psy11518 13 HTASVRSVA--ATSKLAASSGADETVVLYDMVK-RKQSGALMQH-EGTITCLKFTPEGSHLISCS--DDGSIAIFRV--G 84 (139)
Q Consensus 13 ~~~~v~~~~--~~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~--~ 84 (139)
+...+.++. ++++++++++ ++.|.+||+.+ ++.......+ ...+.+++|+|++++++.++ .++...+|.+ .
T Consensus 40 ~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~ 118 (297)
T 2ojh_A 40 TPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPST 118 (297)
T ss_dssp ESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETT
T ss_pred CCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECC
Confidence 344455555 4899998886 78999999998 7766655555 36778999999999999888 3345555554 4
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCCcEEE-EEcCCCeEEEEEcC
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSGKLAL-SVGKDKTLRTWNLV 128 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~i~d~~ 128 (139)
++.. ..+ ..... +..++|+|+++.++ +++.++.+.+|++.
T Consensus 119 ~~~~-~~~--~~~~~-~~~~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 119 GGTP-RLM--TKNLP-SYWHGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp CCCC-EEC--CSSSS-EEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred CCce-EEe--ecCCC-ccceEECCCCCEEEEEECCCCceEEEEEE
Confidence 4442 222 22223 88899999999877 67788989999853
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.48 E-value=1.2e-13 Score=98.00 Aligned_cols=111 Identities=13% Similarity=0.124 Sum_probs=85.1
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCC---CeEEEEECCCCCEEEEecC---------CCcEEEEEeCCc
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEG---TITCLKFTPEGSHLISCSD---------DGSIAIFRVGSW 86 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~---------d~~i~~~d~~~~ 86 (139)
.+.+++++++++ .|+.|++||+.+++....+..+.. .+.+++|||+|++++.++. ++.|.+||+.++
T Consensus 22 ~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g 100 (719)
T 1z68_A 22 NWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG 100 (719)
T ss_dssp EESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred EECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC
Confidence 455588655554 689999999999987776665543 3789999999999988765 689999999988
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
+....... .. .+..++|+|||+.|+.+. ++.|++||+.+++...
T Consensus 101 ~~~~~~~l--~~-~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~ 144 (719)
T 1z68_A 101 EFVRGNEL--PR-PIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQ 144 (719)
T ss_dssp EECCSSCC--CS-SBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred ccccceec--Cc-ccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEE
Confidence 76211111 12 378899999999999886 7899999998876543
No 156
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.46 E-value=2.7e-13 Score=96.01 Aligned_cols=100 Identities=14% Similarity=0.054 Sum_probs=74.2
Q ss_pred EEEEecCCcEEEEeCCC---------CeEEEEEccCCceeeEEE---ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC
Q psy11518 17 VRSVAATSKLAASSGAD---------ETVVLYDMVKRKQSGALM---QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG 84 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~~---------~~v~i~~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~ 84 (139)
-..+++||++|++++.+ +.+.+||+.+++. ..+. .|...+..++|+|+|+.++.++. +.|.+||+.
T Consensus 65 ~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~ 142 (723)
T 1xfd_A 65 RYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHV 142 (723)
T ss_dssp EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSS
T ss_pred eEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECC
Confidence 34556699999988754 7899999988875 2332 34445788999999999998875 789999998
Q ss_pred CceEEEEEEeCCCCc-----------------ceeEEEEccCCcEEEEEcCC
Q psy11518 85 SWQLEKLFKKAHKGT-----------------AVNHISIHPSGKLALSVGKD 119 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~-----------------~v~~~~~~~~~~~l~~~~~d 119 (139)
+++...... .+... .+.+++|+|||+.|++++.|
T Consensus 143 ~g~~~~~~~-~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 143 GKQAIRVVS-TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp SSCCEEEEC-CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEE
T ss_pred CCceEEEec-CCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEEC
Confidence 887665552 22211 13789999999999988754
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.46 E-value=2e-12 Score=89.88 Aligned_cols=111 Identities=18% Similarity=0.140 Sum_probs=83.9
Q ss_pred eEEEEecCCc--EEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCC----CcEEEEEeCCceEE
Q psy11518 16 SVRSVAATSK--LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD----GSIAIFRVGSWQLE 89 (139)
Q Consensus 16 ~v~~~~~~~~--~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~~ 89 (139)
.+.+++++++ .++++..++ +.+||+.+++.......+ . ..++|+|+|++++.++.+ +.|.+||+.+++..
T Consensus 113 ~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 113 RILSGVDTGEAVVFTGATEDR-VALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp EEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred eeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 3567778664 444555544 559999888765544433 3 788999999999977766 67999999888765
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCC--eEEEEEcCCCcee
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRSA 133 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~ 133 (139)
. + ..+... +..++|+|||++|+++..++ .|++||+.+++..
T Consensus 189 ~-l-~~~~~~-~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 189 V-F-DSGEGS-FSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp E-E-CCSSCE-EEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred E-e-ecCCCc-cccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 3 3 344444 89999999999999888888 8999999988776
No 158
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.45 E-value=5.6e-12 Score=83.84 Aligned_cols=105 Identities=13% Similarity=0.151 Sum_probs=87.0
Q ss_pred EEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCC
Q psy11518 17 VRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH 96 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 96 (139)
+..+.|++..|+++ .++.|++||+.+.........|...+..+.+.+. .++++..||.|.+||+.++.....
T Consensus 90 V~~l~fd~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~----- 161 (388)
T 1xip_A 90 VIFVCFHGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL----- 161 (388)
T ss_dssp EEEEEEETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE-----
T ss_pred eeEEEECCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccccc-----
Confidence 77888888999998 8899999999887766677788888888887754 388889999999999998776432
Q ss_pred CCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 97 KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 97 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
. ..|++++|+|+| ++.|..||.+++|+...++.
T Consensus 162 ~-~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 162 A-QNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEM 194 (388)
T ss_dssp E-ESEEEEEECSSE--EEEEETTSCEEEEEEETTEE
T ss_pred c-CCceEEEEcCCc--eEEEEcCCcEEEEcCCCccc
Confidence 1 239999999999 67888999999998877664
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.42 E-value=1.1e-10 Score=76.60 Aligned_cols=114 Identities=12% Similarity=0.221 Sum_probs=78.4
Q ss_pred EEEecCCcEEE-EeCCCCeEEEEEccCCce------e------eE-EEecCCCeEEEEECCCCCEEEEec-CCCcEEEEE
Q psy11518 18 RSVAATSKLAA-SSGADETVVLYDMVKRKQ------S------GA-LMQHEGTITCLKFTPEGSHLISCS-DDGSIAIFR 82 (139)
Q Consensus 18 ~~~~~~~~~l~-~~~~~~~v~i~~~~~~~~------~------~~-~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d 82 (139)
.++++++++++ +...++.|.+|++..... + .. ...+......++|+|+++++++++ .++.|.+||
T Consensus 160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 239 (361)
T 3scy_A 160 VRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFR 239 (361)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEE
Confidence 45566888654 555689999999875432 1 11 123445678999999999887665 689999999
Q ss_pred eCCceEEEE--EEe-CCCCcceeEEEEccCCcEEEEEcC--CCeEEEEEcC--CCc
Q psy11518 83 VGSWQLEKL--FKK-AHKGTAVNHISIHPSGKLALSVGK--DKTLRTWNLV--KGR 131 (139)
Q Consensus 83 ~~~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~~--~~~ 131 (139)
+.++..... +.. ......+..++|+|+|++|+++.. ++.|.+|++. +++
T Consensus 240 ~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~ 295 (361)
T 3scy_A 240 YADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT 295 (361)
T ss_dssp EETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC
T ss_pred ecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc
Confidence 987765332 211 111122679999999998866654 5899999995 455
No 160
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.42 E-value=7.1e-11 Score=75.17 Aligned_cols=114 Identities=15% Similarity=0.192 Sum_probs=84.4
Q ss_pred eEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEec--CCCeEEEEECCCCCEEEEecCCC-cEEEEEeCCceEEE
Q psy11518 16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQH--EGTITCLKFTPEGSHLISCSDDG-SIAIFRVGSWQLEK 90 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~-~i~~~d~~~~~~~~ 90 (139)
....+.+ +++++++...++.|.+||. .++.+..+..+ ...+..++++++++++++...++ .|.+||. +++.+.
T Consensus 165 ~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~ 242 (286)
T 1q7f_A 165 FPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLIS 242 (286)
T ss_dssp SEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEE
T ss_pred CcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEE
Confidence 3445554 7888888788899999997 45555555433 35678999999999888888775 9999995 456666
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
.+........+.+++++|+++++++ +.++.|++|++....+
T Consensus 243 ~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 243 ALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp EEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCCC
T ss_pred EEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccccc
Confidence 6644333333778999999987777 5689999999876554
No 161
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.41 E-value=3e-11 Score=77.07 Aligned_cols=110 Identities=12% Similarity=0.045 Sum_probs=90.8
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecC-CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcce
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV 101 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v 101 (139)
.+++|++++.++.|.+||.++++.+..+..+. ..+.++.++|+|+++++ .++.|..||. +++.++.+...... .+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~~W~~~~~~~~-~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRELWNIAAPAGC-EM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCEEEEEECCTTC-EE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCEEEEEcCCCCc-cc
Confidence 46789999999999999999999999998765 46789999999999883 4677999998 79999988543223 38
Q ss_pred eEEEEccCCcEEEEEcC-CCeEEEEEcCCCceeEEEe
Q psy11518 102 NHISIHPSGKLALSVGK-DKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 102 ~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~ 137 (139)
.++.+.++|+++++.+. ++.+..+|. +++.+..+.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~ 115 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTE 115 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEe
Confidence 88999999999999887 788888886 777776654
No 162
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.40 E-value=6.2e-12 Score=89.01 Aligned_cols=117 Identities=15% Similarity=0.159 Sum_probs=86.0
Q ss_pred EEEEecCCcEEEEeC---------------------------------CCCeEEEEEccCCceeeEEE--ecCCCeEEEE
Q psy11518 17 VRSVAATSKLAASSG---------------------------------ADETVVLYDMVKRKQSGALM--QHEGTITCLK 61 (139)
Q Consensus 17 v~~~~~~~~~l~~~~---------------------------------~~~~v~i~~~~~~~~~~~~~--~~~~~v~~~~ 61 (139)
...+++||++|++++ .+..|.+||+.+++...... .|...+..++
T Consensus 185 ~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 264 (706)
T 2z3z_A 185 GTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLS 264 (706)
T ss_dssp SEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEE
T ss_pred eEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEE
Confidence 345566999999886 45789999998887544332 4566789999
Q ss_pred ECCCCCEEEEecCCC-----cEEEEEeCCc-eEEEEEEeCCCC--cceeEEEEcc--CCcEEEEEcCCCeEEEEEcC-CC
Q psy11518 62 FTPEGSHLISCSDDG-----SIAIFRVGSW-QLEKLFKKAHKG--TAVNHISIHP--SGKLALSVGKDKTLRTWNLV-KG 130 (139)
Q Consensus 62 ~~~~~~~l~~~~~d~-----~i~~~d~~~~-~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~~~~d~~i~i~d~~-~~ 130 (139)
|+|+++.+++++.++ .|.+||+.++ ............ ..+..++|+| +|+++++++.|+.+++|++. ++
T Consensus 265 ~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~ 344 (706)
T 2z3z_A 265 WSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTG 344 (706)
T ss_dssp ECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTS
T ss_pred EECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCC
Confidence 999999998877665 8999999988 443333222221 1246789999 99999999999999999876 44
Q ss_pred cee
Q psy11518 131 RSA 133 (139)
Q Consensus 131 ~~~ 133 (139)
+.+
T Consensus 345 ~~~ 347 (706)
T 2z3z_A 345 RLI 347 (706)
T ss_dssp CEE
T ss_pred CEE
Confidence 443
No 163
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.40 E-value=9.1e-13 Score=93.47 Aligned_cols=99 Identities=14% Similarity=0.144 Sum_probs=72.9
Q ss_pred EEEEecCCcEEEEeCC---------CCeEEEEEccCCcee--eEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 17 VRSVAATSKLAASSGA---------DETVVLYDMVKRKQS--GALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~---------~~~v~i~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
...+++||++|+.++. ++.|.+||+.+++.+ ..+ ...+..++|+|+|+.++.+. ++.|++||+.+
T Consensus 64 ~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~ 139 (719)
T 1z68_A 64 NYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPG 139 (719)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTT
T ss_pred eEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCC
Confidence 4455669999998876 789999999988762 222 24578899999999999875 77999999988
Q ss_pred ceEEEEEEeCCCCc----------------ceeEEEEccCCcEEEEEcCC
Q psy11518 86 WQLEKLFKKAHKGT----------------AVNHISIHPSGKLALSVGKD 119 (139)
Q Consensus 86 ~~~~~~~~~~~~~~----------------~v~~~~~~~~~~~l~~~~~d 119 (139)
++........+... ...+++|+|||++|++++.|
T Consensus 140 g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 140 DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEE
T ss_pred CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEEC
Confidence 77654331222111 12479999999999988754
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.39 E-value=8.4e-11 Score=77.50 Aligned_cols=101 Identities=14% Similarity=0.176 Sum_probs=72.6
Q ss_pred CCCeEEEEEcc-CCceeeEEE----ecCCCeEEEEECCCCCEEEEec-CCCcEEEEEeC-CceEEE--EEEeCCCCccee
Q psy11518 32 ADETVVLYDMV-KRKQSGALM----QHEGTITCLKFTPEGSHLISCS-DDGSIAIFRVG-SWQLEK--LFKKAHKGTAVN 102 (139)
Q Consensus 32 ~~~~v~i~~~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~~d~~-~~~~~~--~~~~~~~~~~v~ 102 (139)
.++.+.+|++. .++....+. .+...+.+++|+|+|+++++++ .++.|.+||+. +++... .+.....+..+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 68999999997 455444333 2456789999999999887665 46789999998 676533 222111123388
Q ss_pred EEEEccCCcEEEEEcC-CCeEEEEEcC--CCce
Q psy11518 103 HISIHPSGKLALSVGK-DKTLRTWNLV--KGRS 132 (139)
Q Consensus 103 ~~~~~~~~~~l~~~~~-d~~i~i~d~~--~~~~ 132 (139)
.++|+|+|++++++++ ++.|.+|++. +++.
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~ 229 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMP 229 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcE
Confidence 9999999998887764 7899999875 4554
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.37 E-value=2.9e-12 Score=91.44 Aligned_cols=110 Identities=12% Similarity=0.087 Sum_probs=85.0
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCC-----eEEEEECCCCCEEEEecCC---------CcEEEEEeC
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGT-----ITCLKFTPEGSHLISCSDD---------GSIAIFRVG 84 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~~~~~d---------~~i~~~d~~ 84 (139)
.+.+++++++++ |+.|++||+.+++....+..|... ...++|||+|++++.++.+ +.+.+||+.
T Consensus 23 ~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~ 100 (740)
T 4a5s_A 23 RWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLN 100 (740)
T ss_dssp EECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred EECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECC
Confidence 334488888886 899999999999887777776532 2347899999999888765 567799999
Q ss_pred CceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeE
Q psy11518 85 SWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (139)
+++.... ..+.. .+...+|+|||+.|+.+. ++.|++||+.+++...
T Consensus 101 ~~~~~~l--~~~~~-~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 101 KRQLITE--ERIPN-NTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR 146 (740)
T ss_dssp TTEECCS--SCCCT-TEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred CCcEEEc--ccCCC-cceeeEECCCCCEEEEEE-CCeEEEEECCCCceEE
Confidence 9876542 22333 389999999999998884 6899999998876543
No 166
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.36 E-value=1.3e-10 Score=80.96 Aligned_cols=113 Identities=11% Similarity=0.031 Sum_probs=92.4
Q ss_pred cCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC--CceEEEEEEeCCCCc
Q psy11518 22 ATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG--SWQLEKLFKKAHKGT 99 (139)
Q Consensus 22 ~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~--~~~~~~~~~~~~~~~ 99 (139)
+.+.++++...++.|.++|..+++.+.++... ..+..+.|+|+++++++++.++.|.+||+. +++....+... ..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G--~~ 241 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG--SE 241 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC--SE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC--CC
Confidence 34567788888999999999999998888743 356799999999999999999999999995 77777766332 22
Q ss_pred ceeEEEEc----cCCcEEEEEcC-CCeEEEEEcCCCceeEEEec
Q psy11518 100 AVNHISIH----PSGKLALSVGK-DKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 100 ~v~~~~~~----~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~ 138 (139)
...++|+ |+|+++++++. ++.+.++|..+.+.+..+.+
T Consensus 242 -P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~ 284 (567)
T 1qks_A 242 -ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST 284 (567)
T ss_dssp -EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred -CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec
Confidence 6889999 69998887775 69999999999998877653
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.36 E-value=3.4e-11 Score=84.69 Aligned_cols=113 Identities=12% Similarity=0.151 Sum_probs=81.6
Q ss_pred EEEecCCcEEEEeCCC----------CeEEEEEccC------CceeeEEE-ecCCCeEEEEECCCCCEEEEecCC-----
Q psy11518 18 RSVAATSKLAASSGAD----------ETVVLYDMVK------RKQSGALM-QHEGTITCLKFTPEGSHLISCSDD----- 75 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~----------~~v~i~~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d----- 75 (139)
.++++||+.|+.++.+ ..|.+||+.+ ++ ...+. .+...+..++|+|+|++|+..+.+
T Consensus 135 ~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~ 213 (662)
T 3azo_A 135 PVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMP 213 (662)
T ss_dssp EEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCT
T ss_pred cEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEEEEEECCCCCCC
Confidence 3444599999988876 5899999987 44 33444 455677888999999999877654
Q ss_pred ---CcEEEEEeC-Cc---eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCC--eEEEEEcCCCcee
Q psy11518 76 ---GSIAIFRVG-SW---QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK--TLRTWNLVKGRSA 133 (139)
Q Consensus 76 ---~~i~~~d~~-~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~ 133 (139)
..|.+||+. ++ ...... ..+... +..++|+|||+++++++.++ .|.+||+.+++..
T Consensus 214 ~~~~~i~~~d~~~~g~~~~~~~l~-~~~~~~-~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~ 278 (662)
T 3azo_A 214 WEGTELKTARVTEDGRFADTRTLL-GGPEEA-IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAAT 278 (662)
T ss_dssp TTCEEEEEEEECTTSCEEEEEEEE-EETTBC-EEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEE
T ss_pred CCCcEEEEEEECCCCcccccEEeC-CCCCce-EcceEECCCCeEEEEECCCCCeEEEEEECCCCcee
Confidence 369999998 56 333333 333333 88999999999888888888 6777777666543
No 168
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.36 E-value=1.3e-11 Score=81.46 Aligned_cols=111 Identities=11% Similarity=0.128 Sum_probs=86.4
Q ss_pred CCcEEEEeC------CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec----------CCCcEEEEEeCCc
Q psy11518 23 TSKLAASSG------ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSW 86 (139)
Q Consensus 23 ~~~~l~~~~------~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~~ 86 (139)
+++++++.. .|+.|.+||..+++.+..+..+..+ .++|+|+++++++++ .++.|.+||..+.
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 555555543 3679999999999988888766544 899999999998775 3567999999998
Q ss_pred eEEEEEEeCC----CCcceeEEEEccCCcEEEEEcC--CCeEEEEEcCCCceeEE
Q psy11518 87 QLEKLFKKAH----KGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 87 ~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~ 135 (139)
+....+.... .+..+..++++|+|++++++.. ++.|.+||+.+++.+..
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 8887775431 1123678999999999998864 68999999999987765
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.35 E-value=4.8e-11 Score=78.66 Aligned_cols=116 Identities=13% Similarity=0.121 Sum_probs=81.0
Q ss_pred EEEEecCCcEEEEeCCCCeEEEEEcc-CCceeeEEEec-CCCeEEEEECCCCCE--EEEec-------------CCCcEE
Q psy11518 17 VRSVAATSKLAASSGADETVVLYDMV-KRKQSGALMQH-EGTITCLKFTPEGSH--LISCS-------------DDGSIA 79 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~~~~v~i~~~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~~~~-------------~d~~i~ 79 (139)
-.+++++++++++++.+ .|.+|++. +++........ .+...+++|+|++++ +++++ .++.+.
T Consensus 44 ~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~ 122 (365)
T 1jof_A 44 WMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGN 122 (365)
T ss_dssp EEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEE
T ss_pred EEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEE
Confidence 34555699999888887 99999997 77654332211 123456899999994 45554 688999
Q ss_pred EEEeC-CceEEEEEEe--CCCCcceeEEEEccCCcEEEEEc-CCCeEEEEEcC-CCcee
Q psy11518 80 IFRVG-SWQLEKLFKK--AHKGTAVNHISIHPSGKLALSVG-KDKTLRTWNLV-KGRSA 133 (139)
Q Consensus 80 ~~d~~-~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~-~~~~~ 133 (139)
+|++. .++....+.. ......+.+++|+|+|++++++. .++.|.+||+. +++..
T Consensus 123 v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~ 181 (365)
T 1jof_A 123 VFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVE 181 (365)
T ss_dssp EEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEE
T ss_pred EEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEE
Confidence 99997 4655443321 11223388999999999887765 46899999998 67653
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.30 E-value=2.4e-09 Score=69.44 Aligned_cols=116 Identities=8% Similarity=0.093 Sum_probs=84.2
Q ss_pred EEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCC----CcEEEEEeCCceEEE
Q psy11518 17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD----GSIAIFRVGSWQLEK 90 (139)
Q Consensus 17 v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~~d~~~~~~~~ 90 (139)
..++.+ ++++++++..++.|.+||..+++.......+...+.+++++|+++++++...+ +.|.+||..++....
T Consensus 47 ~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 47 LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQD 126 (333)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEE
T ss_pred ccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEE
Confidence 344444 78888888889999999998887655444566789999999999988877666 679999988776553
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcC------CCeEEEEEcCCCce
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRS 132 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~ 132 (139)
.+........+.+++++|+++++++... .+.|..+|..+++.
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~ 174 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV 174 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE
Confidence 4321222334889999999988777654 35677777665543
No 171
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.29 E-value=2.3e-10 Score=76.05 Aligned_cols=115 Identities=12% Similarity=0.043 Sum_probs=92.3
Q ss_pred cCCcEEEEeCC-----CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec----------CCCcEEEEEeCCc
Q psy11518 22 ATSKLAASSGA-----DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSW 86 (139)
Q Consensus 22 ~~~~~l~~~~~-----~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~~ 86 (139)
|+++.+++... ++.|.+.|..+.+.+.++..-..+ . +.++|++++++.++ .++.|.+||..+.
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~ 119 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL 119 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 47888777765 679999999999999888865555 4 99999999887665 3578999999999
Q ss_pred eEEEEEEeCC-----CCcceeEEEEccCCcEEEEEcC--CCeEEEEEcCCCceeEEEec
Q psy11518 87 QLEKLFKKAH-----KGTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 87 ~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~ 138 (139)
+....+.... .+.....++++|||++++++.. ++.|.++|+.+++.+..+.+
T Consensus 120 ~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 120 LPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence 9888875542 1223677999999999888763 68999999999999887754
No 172
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.26 E-value=1.7e-09 Score=70.41 Aligned_cols=117 Identities=14% Similarity=0.136 Sum_probs=87.5
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCc-eeeEEE---------ecCCCeEEEEECC-CCCEEEEec-CCCcEEEEEeCCc
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRK-QSGALM---------QHEGTITCLKFTP-EGSHLISCS-DDGSIAIFRVGSW 86 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~l~~~~-~d~~i~~~d~~~~ 86 (139)
++.++++++++...++.|.+|+..... .+..+. .+-.....++++| ++.++++.+ .++.|.+|| .++
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g 175 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSG 175 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTS
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCC
Confidence 344488888998999999999975442 445442 3344678999999 788888886 689999999 566
Q ss_pred eEEEEEEeCCCC--------cceeEEEEccC-CcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 87 QLEKLFKKAHKG--------TAVNHISIHPS-GKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 87 ~~~~~~~~~~~~--------~~v~~~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.....+...... ..+..++++|+ +.++++...++.|++||..+++.+..+
T Consensus 176 ~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~ 234 (329)
T 3fvz_A 176 KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREI 234 (329)
T ss_dssp CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEE
Confidence 666665322211 12789999998 788888888999999999988877655
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.26 E-value=2.2e-09 Score=68.28 Aligned_cols=117 Identities=11% Similarity=0.123 Sum_probs=85.3
Q ss_pred EEEEe--cCCcEEEEeCCCCeEEEEEccCCceeeEEE--ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEE
Q psy11518 17 VRSVA--ATSKLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 17 v~~~~--~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 92 (139)
...+. ++++++++...++.|.+||. .++.+..+. .+...+..++++++++++++...++.|.+||.. +.....+
T Consensus 123 ~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~ 200 (286)
T 1q7f_A 123 PRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQI 200 (286)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEE
T ss_pred ceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEE
Confidence 44444 47888888888899999996 455555554 334568999999999988888889999999974 4555555
Q ss_pred EeCCCCcceeEEEEccCCcEEEEEcCCC-eEEEEEcCCCceeEEE
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSVGKDK-TLRTWNLVKGRSAYIT 136 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~i~d~~~~~~~~~~ 136 (139)
........+..++++++++++++...++ .|.+||. +++.+..+
T Consensus 201 ~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~ 244 (286)
T 1q7f_A 201 GGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISAL 244 (286)
T ss_dssp SCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEE
T ss_pred ccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEE
Confidence 2222113388999999999888888776 9999995 45554443
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.26 E-value=1.9e-10 Score=75.92 Aligned_cols=115 Identities=12% Similarity=0.083 Sum_probs=84.4
Q ss_pred EEecCCcEEEEeCC-CC--eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeC
Q psy11518 19 SVAATSKLAASSGA-DE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA 95 (139)
Q Consensus 19 ~~~~~~~~l~~~~~-~~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 95 (139)
.+++||+.|+.++. ++ .|.+||+.+++.......+...+....|+|+++.|+.++.++.|.+||+.+++....+...
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~ 121 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVP 121 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeech
Confidence 35669998887776 66 5888899888776665556555556789999999999998899999999998877665322
Q ss_pred CCCcceeEE--EEccCCcEEEEE----------------------cCCCeEEEEEcCCCceeEE
Q psy11518 96 HKGTAVNHI--SIHPSGKLALSV----------------------GKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 96 ~~~~~v~~~--~~~~~~~~l~~~----------------------~~d~~i~i~d~~~~~~~~~ 135 (139)
... +... .++|++++++.. ..+..|.+||+.+++....
T Consensus 122 -~~~-~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l 183 (388)
T 3pe7_A 122 -AEW-VGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI 183 (388)
T ss_dssp -TTE-EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE
T ss_pred -hhc-ccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe
Confidence 222 3333 348999988742 2447899999998876543
No 175
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.26 E-value=3e-09 Score=74.18 Aligned_cols=134 Identities=10% Similarity=0.102 Sum_probs=95.4
Q ss_pred eeEEEEEeecceeeEEEEecCCcEEEEeCCCCeEEEEEcc--CCceeeEEEecCCCeEEEEEC----CCCCEEEEecC-C
Q psy11518 3 TLTQTFVTHSHTASVRSVAATSKLAASSGADETVVLYDMV--KRKQSGALMQHEGTITCLKFT----PEGSHLISCSD-D 75 (139)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~~~~-d 75 (139)
+.+.++.. +.......++++++++++++.++.|.+||+. +.+.+.++.... ....++|+ |+|+++++++. +
T Consensus 188 ~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~ 265 (567)
T 1qks_A 188 EIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWP 265 (567)
T ss_dssp CEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEET
T ss_pred eEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccC
Confidence 34444543 2222345667799999999999999999995 777777776533 45789999 69998876655 6
Q ss_pred CcEEEEEeCCceEEEEEEeCC---------CC--------------------------------------------ccee
Q psy11518 76 GSIAIFRVGSWQLEKLFKKAH---------KG--------------------------------------------TAVN 102 (139)
Q Consensus 76 ~~i~~~d~~~~~~~~~~~~~~---------~~--------------------------------------------~~v~ 102 (139)
+.+.++|..+.+.+..+.... .. ....
T Consensus 266 ~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~ 345 (567)
T 1qks_A 266 PQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLH 345 (567)
T ss_dssp TEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEE
T ss_pred CeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeecccccc
Confidence 889999988877766553211 00 0123
Q ss_pred EEEEccCCcEEEEEc-CCCeEEEEEcCCCceeEEEec
Q psy11518 103 HISIHPSGKLALSVG-KDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 103 ~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~ 138 (139)
++.|+|++++++++. .++.|.++|+.+++.+..+.+
T Consensus 346 d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 346 DGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred CceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 567999999876654 678999999999988776543
No 176
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.24 E-value=8.6e-11 Score=83.96 Aligned_cols=98 Identities=12% Similarity=0.116 Sum_probs=73.0
Q ss_pred EEEecCCcEEEEeCCC---------CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 18 RSVAATSKLAASSGAD---------ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~---------~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
..+++||+.|+.++.+ +.+.+||+.+++.. .+..|...+...+|||+|+.+|.+ .++.|.+||+.++..
T Consensus 67 ~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 67 YSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPS 144 (740)
T ss_dssp EEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCC
T ss_pred eEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCce
Confidence 4667899999988875 56779999988754 355667789999999999999887 467899999988775
Q ss_pred EEEEEeCCCCc----------------ceeEEEEccCCcEEEEEc
Q psy11518 89 EKLFKKAHKGT----------------AVNHISIHPSGKLALSVG 117 (139)
Q Consensus 89 ~~~~~~~~~~~----------------~v~~~~~~~~~~~l~~~~ 117 (139)
.......+... ....+.|+|||+.|+.++
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 54331122111 123589999999998875
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.24 E-value=9.8e-10 Score=71.51 Aligned_cols=111 Identities=10% Similarity=0.203 Sum_probs=84.3
Q ss_pred EEecC-CcEEEEeCCCCeEEEEEccCCceeeEEE--ecCCCeEEEEECC------CCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 19 SVAAT-SKLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTP------EGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 19 ~~~~~-~~~l~~~~~~~~v~i~~~~~~~~~~~~~--~~~~~v~~~~~~~------~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
++.++ +.++++...++.|++|+..+++.+..+. .+...+..++++| +++..++...+..+.+||..+++.+
T Consensus 202 a~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~ 281 (329)
T 3fvz_A 202 ALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEII 281 (329)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEE
T ss_pred EEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEE
Confidence 34446 7788888899999999998888887774 3556788999999 3333333344558999999999988
Q ss_pred EEEEe--CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 90 KLFKK--AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 90 ~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
..+.. .+.. .+..++++|+|.++++...++.|++|++...
T Consensus 282 ~~~~~~~~~~~-~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 282 DVFKPVRKHFD-MPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EEECCSSSCCS-SEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred EEEcCCCCccC-CeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 87732 2223 3889999999988888889999999998643
No 178
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.23 E-value=2.3e-10 Score=81.28 Aligned_cols=113 Identities=12% Similarity=0.063 Sum_probs=78.2
Q ss_pred EEecCCcEEE-----EeCCCCeEEEEEccCCcee-eEEEecCCCeEEEEECCCCCEEEEecCCCc-------------EE
Q psy11518 19 SVAATSKLAA-----SSGADETVVLYDMVKRKQS-GALMQHEGTITCLKFTPEGSHLISCSDDGS-------------IA 79 (139)
Q Consensus 19 ~~~~~~~~l~-----~~~~~~~v~i~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-------------i~ 79 (139)
.+++||++|+ .|+.+..|++||+.+++.+ .... .......++|+|+++.|+.++.+.. |.
T Consensus 127 ~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~ 205 (695)
T 2bkl_A 127 AVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVI-EGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIR 205 (695)
T ss_dssp EECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCB-SCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEE
T ss_pred EECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCccc-CcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEE
Confidence 4445999988 5556689999999998765 2111 1111267899999999998887665 99
Q ss_pred EEEeCCceE--EEEEEeCCCCcceeEEEEccCCcEEEEEcCCC----eEEEEEcCCCce
Q psy11518 80 IFRVGSWQL--EKLFKKAHKGTAVNHISIHPSGKLALSVGKDK----TLRTWNLVKGRS 132 (139)
Q Consensus 80 ~~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~ 132 (139)
+|++.++.. ...+........+..+.|+|||++|+..+.++ .|.++|..+++.
T Consensus 206 ~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~ 264 (695)
T 2bkl_A 206 YHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF 264 (695)
T ss_dssp EEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC
T ss_pred EEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce
Confidence 999987652 22332222222378899999999988877655 677777655543
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.20 E-value=4.5e-09 Score=67.04 Aligned_cols=112 Identities=14% Similarity=0.094 Sum_probs=88.8
Q ss_pred ecCCcEEEEeCC-CCeEEEEEccCCceeeEEEe------cCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 21 AATSKLAASSGA-DETVVLYDMVKRKQSGALMQ------HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 21 ~~~~~~l~~~~~-~~~v~i~~~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.++|+.+++.+. ++.+..+|. +++.+..+.. +......+++.++++++++...++.|..||.. ++.++.+.
T Consensus 85 ~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~ 162 (276)
T 3no2_A 85 LPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVK 162 (276)
T ss_dssp CTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEE
T ss_pred CCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEE
Confidence 348999998876 788888885 6777766652 11234456788999999999999999999988 99999885
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
.. .. +.++...++++.++++..+++|..+|..+++.+..+.
T Consensus 163 ~~--~~-~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 163 LS--GT-PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp CS--SC-CCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred CC--CC-ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 43 22 5677888999999999888899999999999987763
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.18 E-value=1.3e-09 Score=77.51 Aligned_cols=110 Identities=11% Similarity=0.113 Sum_probs=78.2
Q ss_pred EEecCCcEEEEeCCCC-----eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCc----------------
Q psy11518 19 SVAATSKLAASSGADE-----TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS---------------- 77 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~-----~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~---------------- 77 (139)
.+++||++|+.+..++ .|++||+.+++.+.....+ ..+..++|+|+++.|+.++.++.
T Consensus 131 ~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 209 (710)
T 2xdw_A 131 AFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQK 209 (710)
T ss_dssp EECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccccccCCCCE
Confidence 4455999888664332 8999999998876533222 23567899999999988877655
Q ss_pred EEEEEeCCceE--EEEEEeCCCCcceeEEEEccCCcEEEEEcC-----CCeEEEEEcCC
Q psy11518 78 IAIFRVGSWQL--EKLFKKAHKGTAVNHISIHPSGKLALSVGK-----DKTLRTWNLVK 129 (139)
Q Consensus 78 i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~ 129 (139)
|.+|++.++.. ...+........+..+.|+|||++|+..+. +..|.+||+.+
T Consensus 210 v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 210 LYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred EEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 99999987652 222222222222678999999998887754 67899999976
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.16 E-value=3.1e-09 Score=69.14 Aligned_cols=101 Identities=13% Similarity=0.212 Sum_probs=74.5
Q ss_pred CCcEEEEeC---------CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCC---C--cEEEEEeCCceE
Q psy11518 23 TSKLAASSG---------ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD---G--SIAIFRVGSWQL 88 (139)
Q Consensus 23 ~~~~l~~~~---------~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~--~i~~~d~~~~~~ 88 (139)
+|+.++... .++.|.+||+.+++... + ..+..++|+|+|++++..+.+ + .|.+||+.+++.
T Consensus 23 dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~ 97 (347)
T 2gop_A 23 KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSS 97 (347)
T ss_dssp ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEE
T ss_pred CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCce
Confidence 777776542 25689999998876433 3 457889999999998876543 2 378888888776
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcC---------------------------CCeEEEEEcCCCce
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGK---------------------------DKTLRTWNLVKGRS 132 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------------------------d~~i~i~d~~~~~~ 132 (139)
....... . +..++|+|+++.|+.++. ...|.+||+.+++.
T Consensus 98 ~~l~~~~---~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 98 KKILEAK---N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEEEEES---E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred EEEEcCC---C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 6555222 2 788999999998887763 25799999998876
No 182
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.14 E-value=1.8e-09 Score=75.97 Aligned_cols=110 Identities=14% Similarity=0.151 Sum_probs=78.2
Q ss_pred EEecCCcEEEEeCCC--------CeEEEEEcc-CC---ceeeEEEecCCCeEEEEECCCCCEEEEecCCC--cEEEEEeC
Q psy11518 19 SVAATSKLAASSGAD--------ETVVLYDMV-KR---KQSGALMQHEGTITCLKFTPEGSHLISCSDDG--SIAIFRVG 84 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~--------~~v~i~~~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~ 84 (139)
.+++||+.|+.++.+ ..|.+||+. ++ +.......+...+..+.|+|+|+++++++.++ .|..||..
T Consensus 194 ~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~ 273 (662)
T 3azo_A 194 RLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPA 273 (662)
T ss_dssp EECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTT
T ss_pred eECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECC
Confidence 456699999877644 489999998 56 44444445577899999999999888888888 45556655
Q ss_pred CceEEEEEEeCCCCcc--------eeEEEEccCCcEEEEEcCCCeEEEE--EcCCCc
Q psy11518 85 SWQLEKLFKKAHKGTA--------VNHISIHPSGKLALSVGKDKTLRTW--NLVKGR 131 (139)
Q Consensus 85 ~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~d~~i~i~--d~~~~~ 131 (139)
+++..... .+.... +..++|+|+++++++++. +.+++| |+.+++
T Consensus 274 ~~~~~~l~--~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 274 TGAATQLC--RREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp TCCEEESS--CCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred CCceeecc--cccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence 66654433 122111 456889999999999998 998999 655554
No 183
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.12 E-value=1.7e-08 Score=65.70 Aligned_cols=106 Identities=11% Similarity=0.053 Sum_probs=80.9
Q ss_pred CCcEEEEeC-CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCC----------CcEEEEEeCCceEEEE
Q psy11518 23 TSKLAASSG-ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD----------GSIAIFRVGSWQLEKL 91 (139)
Q Consensus 23 ~~~~l~~~~-~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------~~i~~~d~~~~~~~~~ 91 (139)
++.++++.. .++.|.++|+.+++.+..+... .....+.++|++++++++..+ +.|.++|..+++....
T Consensus 140 ~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~ 218 (328)
T 3dsm_A 140 GKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQ 218 (328)
T ss_dssp TTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEE
T ss_pred CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEE
Confidence 444444443 4889999999999888777643 344788999999988777665 7899999999888777
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
+.... +..+..++++|+++.++++.. .|.+||+.+++.
T Consensus 219 ~~~~~-g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 219 FKFKL-GDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp EECCT-TCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred EecCC-CCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 64332 223789999999998888765 899999988765
No 184
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.12 E-value=1.1e-08 Score=67.83 Aligned_cols=111 Identities=11% Similarity=-0.061 Sum_probs=84.9
Q ss_pred cCCcEEEEeCC--CC---eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec----------CCCcEEEEEeCCc
Q psy11518 22 ATSKLAASSGA--DE---TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSW 86 (139)
Q Consensus 22 ~~~~~l~~~~~--~~---~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~~ 86 (139)
++++.+++... .. .|.++|..+++.+.++.....+ .+.++|+++.++.+. .++.|.+||..+.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~ 107 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF 107 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC
Confidence 37777777664 22 8899999999988777654333 999999999988775 3677999999988
Q ss_pred eEEEEEEeCCC-----CcceeEEEEccCCcEEEEEcC--CCeEEEEEcCCCceeEE
Q psy11518 87 QLEKLFKKAHK-----GTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 87 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~ 135 (139)
+....+..... +.....+.|+|||+++++++. ++.|.++| .+++.+..
T Consensus 108 ~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 108 LPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred cEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 88777643310 112568999999999998874 57899999 99988766
No 185
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.10 E-value=3.8e-09 Score=71.18 Aligned_cols=114 Identities=11% Similarity=0.001 Sum_probs=89.9
Q ss_pred CCcEEEEeCCC-----CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec----------CCCcEEEEEeCCce
Q psy11518 23 TSKLAASSGAD-----ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSWQ 87 (139)
Q Consensus 23 ~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~~~ 87 (139)
+++.+++.... +.|.++|..+.+.+.++..-..+ .+.++|++++++.+. .++.|.++|..+++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 66666655442 69999999999999988865555 899999999887765 46789999999999
Q ss_pred EEEEEEeCCC-----CcceeEEEEccCCcEEEEEcC--CCeEEEEEcCCCceeEEEec
Q psy11518 88 LEKLFKKAHK-----GTAVNHISIHPSGKLALSVGK--DKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 88 ~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~ 138 (139)
....+..... +.....+.++|||++++++.. ++.|.++|+.+++.+..+.+
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 8888754311 122567899999999998864 68899999999998877654
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.10 E-value=2.2e-08 Score=65.23 Aligned_cols=118 Identities=7% Similarity=0.019 Sum_probs=85.6
Q ss_pred EEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCC
Q psy11518 18 RSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH 96 (139)
Q Consensus 18 ~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~ 96 (139)
..+.+ ++.++++...++.|.++|..+++.+.++.. ......++++++++.+++...++.|.+||..+++....+....
T Consensus 47 ~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~ 125 (328)
T 3dsm_A 47 QSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPD 125 (328)
T ss_dssp EEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTT
T ss_pred eEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCC
Confidence 34444 555666666789999999999999888853 4567899998888555555478999999999998887774433
Q ss_pred CC---cceeEEEEccCCcEEEEEc-CCCeEEEEEcCCCceeEEEe
Q psy11518 97 KG---TAVNHISIHPSGKLALSVG-KDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 97 ~~---~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~ 137 (139)
.. ..+..+++ .+++.+++.. .++.|.++|+++++.+..+.
T Consensus 126 ~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 126 MDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp CCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred ccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 10 02566777 4555555544 48899999999998877654
No 187
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.09 E-value=1e-08 Score=67.60 Aligned_cols=112 Identities=4% Similarity=-0.035 Sum_probs=82.5
Q ss_pred EEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEE--ECCCCCEEEEe----------------------c
Q psy11518 18 RSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLK--FTPEGSHLISC----------------------S 73 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~~l~~~----------------------~ 73 (139)
..++++++.|+.+..++.|.+||+.+++.......+...+.... ++|+++.++.. .
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (388)
T 3pe7_A 86 GFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTK 165 (388)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGC
T ss_pred eEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccC
Confidence 35677999999999899999999999987766665555444343 48999988742 2
Q ss_pred CCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEcc-CCcEEEEEcCC------CeEEEEEcCCCce
Q psy11518 74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHP-SGKLALSVGKD------KTLRTWNLVKGRS 132 (139)
Q Consensus 74 ~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d------~~i~i~d~~~~~~ 132 (139)
.+..|.+||+.+++...... +... +..++|+| +++.|+....+ ..|.++|+..++.
T Consensus 166 ~~~~l~~~d~~~g~~~~l~~--~~~~-~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~ 228 (388)
T 3pe7_A 166 PCCRLMRVDLKTGESTVILQ--ENQW-LGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM 228 (388)
T ss_dssp CCEEEEEEETTTCCEEEEEE--ESSC-EEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC
T ss_pred CcceEEEEECCCCceEEeec--CCcc-ccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce
Confidence 34679999999887665552 2223 78999999 99988776643 3788888866543
No 188
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.08 E-value=6.3e-09 Score=69.32 Aligned_cols=97 Identities=11% Similarity=0.080 Sum_probs=74.5
Q ss_pred cceeeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE--E
Q psy11518 12 SHTASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL--E 89 (139)
Q Consensus 12 ~~~~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~--~ 89 (139)
.+...+.++.+....+++++.||.|.+||+.++.... +...|+|++|+|+| ++.|..||.+++|+....+. .
T Consensus 124 ~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k 197 (388)
T 1xip_A 124 SFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQ 197 (388)
T ss_dssp ECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEE
T ss_pred eeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCcccccc
Confidence 3445567777744458888999999999998776543 34589999999999 67889999999999988775 4
Q ss_pred EEEEe--------CCCCcceeEEEEccCCcEEEE
Q psy11518 90 KLFKK--------AHKGTAVNHISIHPSGKLALS 115 (139)
Q Consensus 90 ~~~~~--------~~~~~~v~~~~~~~~~~~l~~ 115 (139)
..+.. .+. ..|.+++|.+++.++++
T Consensus 198 ~~I~~Pp~~~~~~~~~-~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 198 FEFSLPSELEELPVEE-YSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEECCCHHHHTSCTTT-SEEEEEEESSSSEEEEE
T ss_pred ceecCCcccccccCCC-eeEEEEEEecCCeEEEE
Confidence 44421 133 44999999999998876
No 189
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.08 E-value=4.7e-09 Score=69.31 Aligned_cols=89 Identities=9% Similarity=0.197 Sum_probs=70.9
Q ss_pred EEEecCCcEEEEeCC-----------CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc
Q psy11518 18 RSVAATSKLAASSGA-----------DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW 86 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~-----------~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 86 (139)
..+.++++.++++.. +..|.+||+.+++.+.++..+. +..++|+|++++|++++. +.|.+||..++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 355667777666532 3589999999999999998876 799999999999998887 99999999999
Q ss_pred --eEEEEEEeCCCCcceeEEEEccCCc
Q psy11518 87 --QLEKLFKKAHKGTAVNHISIHPSGK 111 (139)
Q Consensus 87 --~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (139)
+.+..+ .. .+.....++++|+|.
T Consensus 336 ~l~~~~~i-~~-~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 336 EPKLLRTI-EG-AAEASLQVQFHPVGG 360 (361)
T ss_dssp SCEEEEEE-TT-SCSSEEEEEECCCSC
T ss_pred cceeeEEe-cc-CCCCcEEEEecCCCC
Confidence 877775 22 233378899999985
No 190
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.07 E-value=1.1e-08 Score=66.49 Aligned_cols=95 Identities=16% Similarity=0.172 Sum_probs=67.5
Q ss_pred EEEecCCcEEEEeCCC-----CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCC-----------------
Q psy11518 18 RSVAATSKLAASSGAD-----ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDD----------------- 75 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----------------- 75 (139)
..++++|+.|+..+.+ ..|.+|++.+++.......+ . +..+.|+|+++.|+.++.+
T Consensus 64 ~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 64 PRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp EEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred eEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 3555689988876643 24778888877655544433 3 8999999999988876532
Q ss_pred ----------CcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC
Q psy11518 76 ----------GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD 119 (139)
Q Consensus 76 ----------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 119 (139)
..|.+||+.+++....+.. . .+..++|+|+| +++++..+
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~~~~~~~l~~--~--~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTESEEVIEEFEK--P--RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp --------CEEEEEEEETTTTEEEEEEEE--E--TTCEEEEETTE-EEEEEECC
T ss_pred cCcccccCccceEEEEECCCCeEEeeecC--C--CcccccCCCCe-EEEEEecc
Confidence 4688999988877444423 2 37889999999 77777543
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.05 E-value=6.6e-09 Score=65.36 Aligned_cols=113 Identities=6% Similarity=0.041 Sum_probs=82.9
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCC
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG 98 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 98 (139)
++.++++++++...++.|.+|+............+...+..+++++++..+++...++.|..||........ ....+..
T Consensus 156 ~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~~~~~ 234 (270)
T 1rwi_B 156 AVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPFTGLN 234 (270)
T ss_dssp EECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCCCSCS
T ss_pred EEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-eccCCCC
Confidence 334478877777778899999987665433322333567899999999888888788899999987654332 2122222
Q ss_pred cceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 99 TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 99 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
.+.+++++++|+++++...++.|+++++...+..
T Consensus 235 -~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 235 -TPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp -CEEEEEECTTCCEEEEEGGGTEEEEECCCGGGSC
T ss_pred -CceeEEECCCCCEEEEECCCCEEEEEcCCCcccc
Confidence 3889999999998888889999999999876543
No 192
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.03 E-value=5.5e-08 Score=62.13 Aligned_cols=97 Identities=11% Similarity=0.043 Sum_probs=73.7
Q ss_pred EEEecCCc-EEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeC-
Q psy11518 18 RSVAATSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA- 95 (139)
Q Consensus 18 ~~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~- 95 (139)
..+.++++ +++++..++.|..|+..++ ...+..+...+.+++++|+++++++...++.|.+||..+++........
T Consensus 33 ~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~ 110 (296)
T 3e5z_A 33 PVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFE 110 (296)
T ss_dssp EEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEET
T ss_pred CeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccC
Confidence 34445777 7888888999999999877 5666667778899999999998888877889999999777765443211
Q ss_pred -CCCcceeEEEEccCCcEEEEE
Q psy11518 96 -HKGTAVNHISIHPSGKLALSV 116 (139)
Q Consensus 96 -~~~~~v~~~~~~~~~~~l~~~ 116 (139)
.....+..++++|+|+++++.
T Consensus 111 ~~~~~~~~~i~~d~~G~l~vtd 132 (296)
T 3e5z_A 111 GKKLNSPNDVCLAPDGSLWFSD 132 (296)
T ss_dssp TEECCCCCCEEECTTSCEEEEE
T ss_pred CCCCCCCCCEEECCCCCEEEEC
Confidence 111226789999999988873
No 193
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.03 E-value=3.5e-09 Score=68.65 Aligned_cols=112 Identities=14% Similarity=0.122 Sum_probs=84.0
Q ss_pred EEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEe
Q psy11518 17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 17 v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 94 (139)
+.++.+ ++..++....++.++.| .++....+..+...+.+++|+|++++++++..++.|.+||..+++..... .
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~-~ 83 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF-V 83 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE-E
T ss_pred cceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe-e
Confidence 344555 45556666777888888 44556666667777899999999998888888999999999887765544 2
Q ss_pred CCCCcceeEEEEccCCcEEEEEcCC----CeEEEEEcCCCcee
Q psy11518 95 AHKGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVKGRSA 133 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~ 133 (139)
.... .+.+++++|+++++++...+ +.|.+||..+++..
T Consensus 84 ~~~~-~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~ 125 (333)
T 2dg1_A 84 SHKA-NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ 125 (333)
T ss_dssp CSSS-SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred CCCC-CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE
Confidence 2333 38999999999988877766 68999999877654
No 194
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.98 E-value=1.1e-08 Score=73.31 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=74.8
Q ss_pred EEecCCcEEEEeCCC-----CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCc--------------EE
Q psy11518 19 SVAATSKLAASSGAD-----ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGS--------------IA 79 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~-----~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------------i~ 79 (139)
.+++||++|+.+..+ ..|++||+.+++.+.. ..+...+..++|+|+ +.|+.+..++. |.
T Consensus 169 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~ 246 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVW 246 (741)
T ss_dssp EECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEE
Confidence 445599988876533 4699999999887543 112222357899999 98887766543 88
Q ss_pred EEEeCCceE--EEEEEeCCCCcceeEEEEccCCcEEEEEcCC-----CeEEEEEcCCC
Q psy11518 80 IFRVGSWQL--EKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKG 130 (139)
Q Consensus 80 ~~d~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~ 130 (139)
+|++.++.. ...+........+..+.|+|||++|+..+.+ ..|.+||+.++
T Consensus 247 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 247 LHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp EEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred EEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 899876542 2223222221127889999999988877654 38999999876
No 195
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.97 E-value=1.5e-07 Score=60.18 Aligned_cols=112 Identities=15% Similarity=0.113 Sum_probs=76.4
Q ss_pred EEecCCcEEEEe----C-------------CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy11518 19 SVAATSKLAASS----G-------------ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIF 81 (139)
Q Consensus 19 ~~~~~~~~l~~~----~-------------~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 81 (139)
.+.++|+++++. + ..+.|..++.. ++ ...+..+......++|+|+++.+++...++.|.+|
T Consensus 121 ~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~ 198 (296)
T 3e5z_A 121 CLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRY 198 (296)
T ss_dssp EECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEE
Confidence 344588888863 2 13456555554 33 44445566677899999999988777888999999
Q ss_pred EeC-CceE---EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 82 RVG-SWQL---EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 82 d~~-~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
++. ++.. ...+ ..... .+.+++++++|++.++. ++.|.+||.. ++.+..+.
T Consensus 199 ~~~~~g~~~~~~~~~-~~~~~-~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~ 253 (296)
T 3e5z_A 199 CLNARGETEYQGVHF-TVEPG-KTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVL 253 (296)
T ss_dssp EECSSSCEEEEEEEE-CCSSS-CCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEE
T ss_pred EECCCCcCcCCCeEe-eCCCC-CCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEE
Confidence 996 4544 2333 22233 36789999999876666 7889999986 66655543
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.92 E-value=6.5e-07 Score=56.80 Aligned_cols=122 Identities=11% Similarity=0.154 Sum_probs=85.9
Q ss_pred EEEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE--ecCCCeEEEEECCCCCEEEEecCCCcEEEE
Q psy11518 6 QTFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTPEGSHLISCSDDGSIAIF 81 (139)
Q Consensus 6 ~~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 81 (139)
..+........+.++.. ++.++++...++.|..||.. ++. ..+. .....+..+++++++..+++...++.|..|
T Consensus 6 ~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 83 (299)
T 2z2n_A 6 QELNLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRI 83 (299)
T ss_dssp EEEECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EEEcCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEE
Confidence 33444444455666665 78887777778899999987 543 2322 244678999999999988888778889999
Q ss_pred EeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
|.. +.. ..+........+..+++++++.++++...++.|..||. +++.
T Consensus 84 ~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 84 TKK-GII-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKI 131 (299)
T ss_dssp CTT-SCE-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred CCC-CcE-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCE
Confidence 976 333 22322222334889999999998888878889999998 5543
No 197
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.92 E-value=2.2e-09 Score=70.81 Aligned_cols=115 Identities=6% Similarity=0.017 Sum_probs=76.2
Q ss_pred EEecCCcEEEEeCC---CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeC
Q psy11518 19 SVAATSKLAASSGA---DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA 95 (139)
Q Consensus 19 ~~~~~~~~l~~~~~---~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~ 95 (139)
.++++|+.|+.... +..|.+||+.+++.......+......+.|+|+++.|+..+.++.|.+||+.+++........
T Consensus 42 ~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~ 121 (396)
T 3c5m_A 42 CFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVD 121 (396)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC
T ss_pred cCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecc
Confidence 34568988776543 347888898887654333322222233789999999998888889999999888766555222
Q ss_pred CCCcceeE-------------------EEEccCCcEEEEE-----cCCCeEEEEEcCCCceeEE
Q psy11518 96 HKGTAVNH-------------------ISIHPSGKLALSV-----GKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 96 ~~~~~v~~-------------------~~~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~ 135 (139)
... ... ..|+|+++.++.. ..+..|.+||+.+++....
T Consensus 122 -~~~-~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~ 183 (396)
T 3c5m_A 122 -EEW-KGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVI 183 (396)
T ss_dssp -TTE-EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEE
T ss_pred -ccc-CCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEee
Confidence 211 111 3567777766554 3567899999998876543
No 198
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.91 E-value=5.5e-08 Score=64.11 Aligned_cols=110 Identities=13% Similarity=0.027 Sum_probs=71.4
Q ss_pred EEec-CCcEEEEeCCC------CeEEEEEccCCceeeEEEec-CCCeEEEEECCCCCEEEEecCC-----CcEEEEEeCC
Q psy11518 19 SVAA-TSKLAASSGAD------ETVVLYDMVKRKQSGALMQH-EGTITCLKFTPEGSHLISCSDD-----GSIAIFRVGS 85 (139)
Q Consensus 19 ~~~~-~~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~ 85 (139)
.+++ ++..++..+.+ ..|.+|++..++........ ...+..+.|+|++++++..+.+ +.|.+||+.+
T Consensus 194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 194 IYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp EEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT
T ss_pred eECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC
Confidence 4455 57666554432 46888888665432222211 2347788999999987765433 3499999988
Q ss_pred ceEEEEEEeCCCCcceeEEEEcc-CCcEEEEEc----------------CCCeEEEEEcCCCcee
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHP-SGKLALSVG----------------KDKTLRTWNLVKGRSA 133 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~----------------~d~~i~i~d~~~~~~~ 133 (139)
++....... .. .. +.|+| ++++++.++ .+..|.+||+.+++..
T Consensus 274 g~~~~l~~~--~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 333 (396)
T 3c5m_A 274 LENEEVMVM--PP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ 333 (396)
T ss_dssp CCEEEEEEC--CS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC
T ss_pred CCeEEeeeC--CC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE
Confidence 776544321 12 33 88999 999888754 3478999999887643
No 199
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.89 E-value=1.8e-10 Score=76.28 Aligned_cols=110 Identities=12% Similarity=0.016 Sum_probs=60.6
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCccee
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 102 (139)
++..+++++.|+.|..||..+++.+..+.. ..+.+..+.+++..+++++.|+.|..||..+++.+..+.... ...+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~-~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTI-PELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCH-HHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccC-ccccc
Confidence 688999999999999999999999988876 444555555677788888899999999998887665542111 00010
Q ss_pred -EEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 103 -HISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 103 -~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
...+. .+..+++++.|+.++.||.++|+.+..+
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC--------
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEe
Confidence 00111 2334555666677777777777665443
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.88 E-value=1e-06 Score=55.84 Aligned_cols=114 Identities=10% Similarity=0.084 Sum_probs=81.4
Q ss_pred eeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE--ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE
Q psy11518 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 90 (139)
..+..+.+ ++.++++...++.|..|+.. ++ ...+. .....+..+.++++++++++...++.|..||. ++....
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~ 133 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENAANKIGRITKK-GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE 133 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE
T ss_pred CceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE
Confidence 34455554 77888887778899999976 33 22232 23456889999999998888877888999998 555443
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
.. .......+..+++++++.++++...++.|..||. +++..
T Consensus 134 ~~-~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 134 YE-LPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp EE-CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred ec-CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 32 2222334889999999988888777889999998 66544
No 201
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.88 E-value=1.7e-07 Score=66.78 Aligned_cols=113 Identities=12% Similarity=0.090 Sum_probs=85.5
Q ss_pred CC---cEEEEeCCCCeEEEEEccCCceeeEEEecCC----------C-e------------------------EEEEECC
Q psy11518 23 TS---KLAASSGADETVVLYDMVKRKQSGALMQHEG----------T-I------------------------TCLKFTP 64 (139)
Q Consensus 23 ~~---~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~----------~-v------------------------~~~~~~~ 64 (139)
+| ..++.++.+|.+.++|..+++.+..+..... . + ..++++|
T Consensus 323 dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp 402 (677)
T 1kb0_A 323 AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP 402 (677)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET
T ss_pred CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC
Confidence 66 6789999999999999999998876652210 0 0 1467888
Q ss_pred CCCEEEEecC-------------------------------------------CCcEEEEEeCCceEEEEEEeCCCCcce
Q psy11518 65 EGSHLISCSD-------------------------------------------DGSIAIFRVGSWQLEKLFKKAHKGTAV 101 (139)
Q Consensus 65 ~~~~l~~~~~-------------------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~v 101 (139)
++.++++... .+.|..||+.+++..+.+..... +
T Consensus 403 ~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~---~ 479 (677)
T 1kb0_A 403 QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSP---W 479 (677)
T ss_dssp TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSS---C
T ss_pred CCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCC---C
Confidence 8777765432 26799999999999988854322 3
Q ss_pred eEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 102 NHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 102 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
....+...+..++.++.|+.+++||+++++.+..+.+
T Consensus 480 ~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 480 NGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp CCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred cCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeC
Confidence 4445566788888899999999999999999988764
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.87 E-value=8.7e-08 Score=60.20 Aligned_cols=113 Identities=11% Similarity=0.048 Sum_probs=79.6
Q ss_pred EEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEe
Q psy11518 17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 17 v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~ 94 (139)
...+.+ ++.++++...++.|.+|+..+.............+..++++++++++++...++.|..||.......... .
T Consensus 110 p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~-~ 188 (270)
T 1rwi_B 110 PEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP-F 188 (270)
T ss_dssp EEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC-C
T ss_pred CcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec-c
Confidence 344444 7777777777889999976554333222222335678999999998888777889999998776544322 2
Q ss_pred CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 95 AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
... ..+.+++++++|.++++...++.|.+||.....
T Consensus 189 ~~~-~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 189 TDI-TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp SSC-CSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred cCC-CCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 222 338899999999888887788899999987644
No 203
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.86 E-value=9e-07 Score=55.92 Aligned_cols=127 Identities=7% Similarity=-0.075 Sum_probs=87.2
Q ss_pred eEEEEEeecceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCC-eEEEEECCCCCEEEEecCCCcEEEE
Q psy11518 4 LTQTFVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGT-ITCLKFTPEGSHLISCSDDGSIAIF 81 (139)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~~~~~d~~i~~~ 81 (139)
.++++.. ........+.+ ++.+..+.+.++.|+++|+++++.+..+ -.... -..+++.. .+.....-.++.+.++
T Consensus 45 Vv~~~ph-d~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~ 121 (268)
T 3nok_A 45 IIREYPH-ATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWTEGLLFTW 121 (268)
T ss_dssp EEEEEEC-CTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESSSCEEEEE
T ss_pred EEEEEcC-CCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEccCCEEEEE
Confidence 4444432 22233345566 5666677788889999999999888776 32221 13355543 3444555678899999
Q ss_pred EeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 82 RVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 82 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
|..+.+.+..+..... -..++ ++++.|+.+..++.|.++|..+.+.+..+.+
T Consensus 122 D~~Tl~~~~ti~~~~e---GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 122 SGMPPQRERTTRYSGE---GWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp ETTTTEEEEEEECSSC---CCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ECCcCcEEEEEeCCCc---eeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 9999999999865433 24445 4677777777799999999999998887764
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.86 E-value=6.5e-07 Score=57.34 Aligned_cols=107 Identities=11% Similarity=0.170 Sum_probs=75.2
Q ss_pred cCCcEE-EEeCCCCeEEEEEcc-CCce-----eeEEEecC-CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 22 ATSKLA-ASSGADETVVLYDMV-KRKQ-----SGALMQHE-GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 22 ~~~~~l-~~~~~~~~v~i~~~~-~~~~-----~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
++++.+ ++...++.|.+|++. +++. ...+..+. ..+..++++++++++++...++.|..||..+++....+.
T Consensus 185 ~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 185 GRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp SCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE
T ss_pred CCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEe
Confidence 666554 455678899999986 4432 12222232 457889999999988887778899999988666555553
Q ss_pred eCCCCcceeEEEEccCCcEE-EEEcCCCeEEEEEcCCC
Q psy11518 94 KAHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~ 130 (139)
.. .. .+.+++++|+++.| ++...++.|..|++...
T Consensus 265 ~~-~~-~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 265 CP-FE-KPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp CS-SS-CEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred CC-CC-CceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 22 23 38999999999944 55556789999998753
No 205
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.84 E-value=2.2e-06 Score=54.40 Aligned_cols=132 Identities=11% Similarity=-0.027 Sum_probs=85.7
Q ss_pred eeeEEEEEeecce-eeEEEEecCCcEEEEeCC--CCeEEEEEccCCceeeEEEecC-CCeEEEEECCCCCEEEEecCCCc
Q psy11518 2 YTLTQTFVTHSHT-ASVRSVAATSKLAASSGA--DETVVLYDMVKRKQSGALMQHE-GTITCLKFTPEGSHLISCSDDGS 77 (139)
Q Consensus 2 ~~~~~~~~~~~~~-~~v~~~~~~~~~l~~~~~--~~~v~i~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~ 77 (139)
++.+.++...+.. ..=..+.+++.+.++.+. ++.|+++|+.+++.+..+.-.. .....+++. .++..++.-.++.
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-NEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEETTCSE
T ss_pred ceEEEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-CCEEEEEEecCCE
Confidence 4556666543321 122333445555554443 6899999999999888765322 122345554 2344455566889
Q ss_pred EEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+.++|..+.+.+..+... ... -.. +++|++.++++..++.|.++|..+.+.+..+.+
T Consensus 88 v~viD~~t~~v~~~i~~g-~~~-g~g--lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQ-MKD-GWG--LATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp EEEEETTTTEEEEEEECC-SSS-CCE--EEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEECCCCcEEEEEECC-CCC-eEE--EEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 999999999998888544 111 233 455788777777889999999999988877653
No 206
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.83 E-value=1.3e-06 Score=55.39 Aligned_cols=112 Identities=12% Similarity=0.104 Sum_probs=83.3
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEec-CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcc-
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQH-EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA- 100 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~- 100 (139)
.+.+.++.-.++.+.++|..+.+.+.++..- .. .+.++++++.++.+..++.|.++|..+.+....+.....+.+
T Consensus 75 g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~---g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~ 151 (266)
T 2iwa_A 75 NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD---GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRV 151 (266)
T ss_dssp TTEEEEEETTCSEEEEEETTTTEEEEEEECCSSS---CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEEC
T ss_pred CCEEEEEEecCCEEEEEECCCCcEEEEEECCCCC---eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCccc
Confidence 3445556667899999999999998888643 22 233555777777777788999999999888887754433222
Q ss_pred --eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 101 --VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 101 --v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+..+.|. +++.++....++.|.+.|..+++.+..+.+
T Consensus 152 ~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 152 IRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEEC
T ss_pred ccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEEC
Confidence 5678888 776666666788999999999999888765
No 207
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.82 E-value=2.9e-07 Score=61.34 Aligned_cols=121 Identities=10% Similarity=0.065 Sum_probs=82.6
Q ss_pred eeeEEEEEeecceeeEEEEecCCcEEEEeC----------CCCeEEEEEccCCceeeEEEecC-------CCeEEEEECC
Q psy11518 2 YTLTQTFVTHSHTASVRSVAATSKLAASSG----------ADETVVLYDMVKRKQSGALMQHE-------GTITCLKFTP 64 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~----------~~~~v~i~~~~~~~~~~~~~~~~-------~~v~~~~~~~ 64 (139)
++.+.++...... . ..++++++.++++. .++.|.+||..+.+.+.++.-.. .....+.++|
T Consensus 69 ~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp 146 (386)
T 3sjl_D 69 GRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP 146 (386)
T ss_dssp TEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT
T ss_pred CeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC
Confidence 3455666653333 3 77888999887775 36789999999999888775321 1345789999
Q ss_pred CCCEEEEecC--CCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 65 EGSHLISCSD--DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 65 ~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
+|+++..+.. ++.|.++|+.+++....+..... ...+....+.+++.+.||.+.+.++.+
T Consensus 147 DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-----~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 147 DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-----YHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-----EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-----ceeecCCCceeEEECCCCCEEEEECCC
Confidence 9999887763 68899999999999888844321 112222334455556666766666655
No 208
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.82 E-value=3.3e-06 Score=52.78 Aligned_cols=130 Identities=8% Similarity=0.012 Sum_probs=87.5
Q ss_pred eeeEEEEEeecceeeEEEEec-CCcEEEEeCCC--CeEEEEEccCCceeeEEEecCCCe-EEEEECCCCCEEEEecCCCc
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA-TSKLAASSGAD--ETVVLYDMVKRKQSGALMQHEGTI-TCLKFTPEGSHLISCSDDGS 77 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~~--~~v~i~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~ 77 (139)
++.++++.. ......-.+.+ ++.+..+.+.. ..|+.+|+++++.+....-..... ..++.. +++.....-.++.
T Consensus 9 ~~v~~~~ph-d~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 9 YRVVKRYPH-DTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEEEC-CTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSE
T ss_pred eEEEEEcCC-CCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCE
Confidence 566777743 23344456666 44444555554 499999999999888776432221 233433 2344455567889
Q ss_pred EEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+.++|..+.+.+..+..... -..++ +++..|+.+..++.|.++|..+.+.+..+.+
T Consensus 87 v~v~D~~tl~~~~ti~~~~~---Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 87 GFVYDLATLTPRARFRYPGE---GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEEETTTTEEEEEEECSSC---CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEECCcCcEEEEEeCCCC---ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 99999999999999865433 24555 4567666666789999999999998887764
No 209
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.82 E-value=7.6e-08 Score=63.80 Aligned_cols=102 Identities=11% Similarity=-0.116 Sum_probs=79.0
Q ss_pred EEEEeCCCC----eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec----------CCCcEEEEEeCCceEEEE
Q psy11518 26 LAASSGADE----TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----------DDGSIAIFRVGSWQLEKL 91 (139)
Q Consensus 26 ~l~~~~~~~----~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~~d~~~~~~~~~ 91 (139)
.+++...++ .|.++|..+++.+.++..-..+ .+.++|+++.+..+. .++.|.+||..+++....
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 344444444 8889999999999998865555 799999999888775 367899999999999988
Q ss_pred EEeCCC-----CcceeEEEEccCCcEEEEEcC--CCeEEE--EEcCC
Q psy11518 92 FKKAHK-----GTAVNHISIHPSGKLALSVGK--DKTLRT--WNLVK 129 (139)
Q Consensus 92 ~~~~~~-----~~~v~~~~~~~~~~~l~~~~~--d~~i~i--~d~~~ 129 (139)
+..+.. +.....++++|||++++++.. +..+.+ +|+.+
T Consensus 112 I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 112 IELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 854411 122567999999999988864 467888 88866
No 210
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.80 E-value=3.1e-06 Score=53.66 Aligned_cols=123 Identities=8% Similarity=0.079 Sum_probs=85.4
Q ss_pred EEEeecceeeEEEEec--CCcEEEEeCCCCeEEEEEccCCceee-EEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEe
Q psy11518 7 TFVTHSHTASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV 83 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~ 83 (139)
.+..........++.. ++.++++...++.|..||.. ++... .+......+..++++++++.+++...++.|..+|.
T Consensus 12 ~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 12 EFNLSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSK 90 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred EEecCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECC
Confidence 3443333344555554 78888887788999999987 54332 12223356889999999998888777888999998
Q ss_pred CCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 84 GSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 84 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
. ++.. .+........+.++++.++++++++...++.|..||.. ++..
T Consensus 91 ~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 91 K-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp T-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred C-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence 7 5543 33233223348899999999988887778899999987 5443
No 211
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.80 E-value=2.4e-06 Score=53.95 Aligned_cols=130 Identities=8% Similarity=0.061 Sum_probs=86.2
Q ss_pred eeeEEEEEeecceeeEEEEec-CCcEEEEeCCCC--eEEEEEccCCceeeEEEecCCCeEEEEECCCCCEE-EEecCCCc
Q psy11518 2 YTLTQTFVTHSHTASVRSVAA-TSKLAASSGADE--TVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGS 77 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~~~--~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~ 77 (139)
++.++++... .....-.+.+ ++.++.+.+.+| .|+.+|+++++.+....... ........+.+..+ ...-.++.
T Consensus 31 ~~vv~~~phd-~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 31 YQIVHSYPHD-TKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEEEECC-TTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSE
T ss_pred eEEEEEecCC-CCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCE
Confidence 4556666432 2233344555 565556666554 89999999999888876433 22232222334444 44556889
Q ss_pred EEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+.++|..+.+.+..+.....+ ..++ ++++.|+.+..++.|.++|..+.+.+..+.+
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG---~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEG---WGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCC---CCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEEEECccCcEEEEEECCCCc---eEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 999999999999998654332 3344 5677777776788999999999988877654
No 212
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.80 E-value=5.8e-07 Score=64.15 Aligned_cols=115 Identities=10% Similarity=0.046 Sum_probs=83.3
Q ss_pred ecCCc---EEEEeCCCCeEEEEEccCCceeeEEEecCC-C--------------------------------------eE
Q psy11518 21 AATSK---LAASSGADETVVLYDMVKRKQSGALMQHEG-T--------------------------------------IT 58 (139)
Q Consensus 21 ~~~~~---~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~-~--------------------------------------v~ 58 (139)
..+|+ .++.++.+|.+.++|..+++.+........ . -.
T Consensus 313 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~ 392 (689)
T 1yiq_A 313 PIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQ 392 (689)
T ss_dssp EETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSS
T ss_pred ccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCC
Confidence 34555 788999999999999999988744321110 0 01
Q ss_pred EEEECCCCCEEEEecC---------------------------------------------CCcEEEEEeCCceEEEEEE
Q psy11518 59 CLKFTPEGSHLISCSD---------------------------------------------DGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 59 ~~~~~~~~~~l~~~~~---------------------------------------------d~~i~~~d~~~~~~~~~~~ 93 (139)
.++++|+..++++... +|.|..||+.+++..+.+.
T Consensus 393 ~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~ 472 (689)
T 1yiq_A 393 PMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVP 472 (689)
T ss_dssp CCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEE
T ss_pred cceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEcc
Confidence 2678887776665421 3779999999999998885
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.... .....+...+.+++.++.|+.++.||.++|+.+..+.+
T Consensus 473 ~~~~---~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 473 YVTI---FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp ESSS---CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCCC---ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeC
Confidence 4322 23334556788899999999999999999999988764
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.80 E-value=2.4e-06 Score=54.78 Aligned_cols=123 Identities=14% Similarity=0.135 Sum_probs=77.5
Q ss_pred eEEEEec--CCcEEEEeCC---------CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEE-EEecCCCcEEEEEe
Q psy11518 16 SVRSVAA--TSKLAASSGA---------DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRV 83 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~---------~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~ 83 (139)
.+.++.+ +|+++++... ...-.+|.+........+.........++|+|+++.+ ++.+.++.|..||+
T Consensus 99 ~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 99 RFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp EEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred CCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEec
Confidence 3445544 7876665422 1223455444322233333334456899999999866 45566788999997
Q ss_pred --CCceEE--EEEEe-CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 84 --GSWQLE--KLFKK-AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 84 --~~~~~~--~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.++... ..+.. ......+..++++++|++.++....+.|..||..+++.+..+.+
T Consensus 179 d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~ 238 (297)
T 3g4e_A 179 DLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKL 238 (297)
T ss_dssp CTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEEC
T ss_pred cCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEEC
Confidence 445432 22211 11122378899999998888777788999999998988776653
No 214
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.77 E-value=1.2e-06 Score=55.21 Aligned_cols=115 Identities=11% Similarity=0.147 Sum_probs=83.9
Q ss_pred Eec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCC
Q psy11518 20 VAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG 98 (139)
Q Consensus 20 ~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 98 (139)
+.+ .+.+.+....++.+.+||.++.+.+.++...... ..+++++..|+.+..++.|.++|..+.+....+.....+
T Consensus 92 it~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG---~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g 168 (262)
T 3nol_A 92 ISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG---WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG 168 (262)
T ss_dssp EEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCC---CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT
T ss_pred EEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCc---eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC
Confidence 344 3444455557899999999999999988753322 233456777777777888999999998888877553332
Q ss_pred cc---eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 99 TA---VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 99 ~~---v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.+ ++.+.|. +|+..+..-.++.|.+.|.++++.+..+.+
T Consensus 169 ~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 169 EELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp EECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred ccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 22 4557776 777666666788999999999999988875
No 215
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.76 E-value=2.4e-06 Score=56.75 Aligned_cols=102 Identities=10% Similarity=0.086 Sum_probs=72.7
Q ss_pred CCCCeEEEEEccCCc--eeeEEEe----------cCCCeEEEEECCCCCEEEEecC----------CCcEEEEEeCCceE
Q psy11518 31 GADETVVLYDMVKRK--QSGALMQ----------HEGTITCLKFTPEGSHLISCSD----------DGSIAIFRVGSWQL 88 (139)
Q Consensus 31 ~~~~~v~i~~~~~~~--~~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~----------d~~i~~~d~~~~~~ 88 (139)
+..+.+.+.|+.+.. .+..+.- .......+.++|+++.+..... ++.|.++|..+++.
T Consensus 231 ~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v 310 (373)
T 2mad_H 231 VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT 310 (373)
T ss_pred cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE
Confidence 356778888876542 1222211 0122344788998887766532 35799999999999
Q ss_pred EEEEEeCCCCcceeEEEEccCCc-EEEEEc-CCCeEEEEEcCCCceeEE
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGK-LALSVG-KDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~i~d~~~~~~~~~ 135 (139)
+..+.... ...+++|+|||+ .++++. .++.|.++|+.+++.+..
T Consensus 311 v~~i~~g~---~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 311 SSQISLGH---DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred EEEEECCC---CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 88884433 278999999999 777777 589999999999998876
No 216
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.75 E-value=2.4e-09 Score=70.93 Aligned_cols=107 Identities=11% Similarity=0.056 Sum_probs=62.3
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCccee
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 102 (139)
.+..+++++.++.+..||..+++.+..+..+. ...++|++..+++++.++.|..||.++++.++.+.... ..
T Consensus 91 ~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~----~~ 162 (369)
T 2hz6_A 91 SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD----YA 162 (369)
T ss_dssp ----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE----EC
T ss_pred cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc----cc
Confidence 45567788889999999999999888776543 23456678888899999999999999988766653221 12
Q ss_pred EEEEccCC---cEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 103 HISIHPSG---KLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 103 ~~~~~~~~---~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
..++.++. ..+++++.|+.+..||.++++.+....
T Consensus 163 ~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 163 ASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp CBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred CccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 22333332 457778889999999999999887664
No 217
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.74 E-value=6.4e-06 Score=51.48 Aligned_cols=112 Identities=15% Similarity=0.163 Sum_probs=83.2
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcc--
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTA-- 100 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~-- 100 (139)
.+.+......++.+.+||.++.+.+.++...... ..++ +++..|..+..++.|.++|..+.+....+.....+.+
T Consensus 74 ~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~ 150 (243)
T 3mbr_X 74 RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLD 150 (243)
T ss_dssp TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccc
Confidence 4555556668899999999999999988754333 3444 4667777777788999999999988887754433222
Q ss_pred -eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 101 -VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 101 -v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+..+.|. +|+..+..-.+..|.+.|.++++.+..+.+
T Consensus 151 ~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 151 NLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDL 188 (243)
T ss_dssp CEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEEC
T ss_pred cceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEEC
Confidence 4566665 677666665688999999999999988875
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.73 E-value=1.4e-06 Score=58.57 Aligned_cols=114 Identities=12% Similarity=0.108 Sum_probs=78.2
Q ss_pred EEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCC--cEEEEEeCCceEEEEE
Q psy11518 17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG--SIAIFRVGSWQLEKLF 92 (139)
Q Consensus 17 v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~ 92 (139)
...+.+ +++++++...++.|+.||+.++.......... ... ++|+++++.++.++.++ .|..++...+.....+
T Consensus 133 P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~ 210 (409)
T 3hrp_A 133 MWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRI 210 (409)
T ss_dssp EEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEE
T ss_pred ceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEe
Confidence 334444 78888888888999999998776655444332 233 99999999888887765 7888887655433322
Q ss_pred E-e-CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 93 K-K-AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 93 ~-~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
. . ......+.+++++|++..|+.+..++.|+.||..++..
T Consensus 211 g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~ 252 (409)
T 3hrp_A 211 GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV 252 (409)
T ss_dssp EECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE
T ss_pred eeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE
Confidence 1 1 21233378899999544455577788999999987754
No 219
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.73 E-value=7.4e-06 Score=51.89 Aligned_cols=114 Identities=9% Similarity=0.052 Sum_probs=80.8
Q ss_pred eeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE--ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEE
Q psy11518 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM--QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEK 90 (139)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~ 90 (139)
..+..+.. ++.++++...++.|..+|.. ++.. .+. .....+..++++++++++++...++.|..+|.. ++...
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~ 138 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE 138 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE
Confidence 34455554 67777777778899999987 5432 222 234568899999999988888778889999987 55543
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
.. .......+..+++.+++++.++...++.|..||. +++..
T Consensus 139 ~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 139 YD-LPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp EE-CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred cc-CCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence 22 2323334889999999997777777888999998 55443
No 220
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.70 E-value=1.7e-06 Score=54.71 Aligned_cols=115 Identities=8% Similarity=0.085 Sum_probs=85.4
Q ss_pred Eec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCC
Q psy11518 20 VAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKG 98 (139)
Q Consensus 20 ~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~ 98 (139)
+.+ .+.+.+....++.+.+||.++.+.+.++...... ..++ +++..|+.+..++.|.++|..+.+....+.....+
T Consensus 101 it~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g 177 (268)
T 3nok_A 101 LASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRG 177 (268)
T ss_dssp EEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSSCC-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred EEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCCce-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCC
Confidence 444 3445555667899999999999999988753322 3333 57788887778899999999999888877554433
Q ss_pred cc---eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 99 TA---VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 99 ~~---v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.+ +..+.|. +|+..+..-.+..|.+.|.++++.+..+.+
T Consensus 178 ~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 178 QPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp EECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEEC
T ss_pred cccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEEC
Confidence 22 4667776 777666665788999999999999988875
No 221
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.67 E-value=2.1e-06 Score=61.29 Aligned_cols=118 Identities=14% Similarity=0.048 Sum_probs=78.0
Q ss_pred EEecCCcEEEEeCC-----CCeEEEEEccC------Cc-eeeEEEecCCCeEEEEECCCCCEEEEecC----CCcEEEEE
Q psy11518 19 SVAATSKLAASSGA-----DETVVLYDMVK------RK-QSGALMQHEGTITCLKFTPEGSHLISCSD----DGSIAIFR 82 (139)
Q Consensus 19 ~~~~~~~~l~~~~~-----~~~v~i~~~~~------~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~~~d 82 (139)
.++++|++|+..+. +..|.+||+.+ +. ....+..+...+.. .|+|++..++..+. .+.|.+||
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence 44558998876653 57899999986 43 45666666665554 58888887765443 23699999
Q ss_pred eCCceE--EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCe--EEEEEcCCCceeEEEe
Q psy11518 83 VGSWQL--EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT--LRTWNLVKGRSAYITN 137 (139)
Q Consensus 83 ~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--i~i~d~~~~~~~~~~~ 137 (139)
+.++.. ...+........+..++|++++.++++...++. |.+||+.+++.+..+.
T Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 318 FTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp TTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEEC
T ss_pred CCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecC
Confidence 877641 123312222224888999988888888888874 6677877777655443
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.67 E-value=3.9e-07 Score=64.94 Aligned_cols=109 Identities=13% Similarity=0.163 Sum_probs=72.5
Q ss_pred EEecCCcEEE-----EeCCCCeEEEEEccCCceeeE-EEecCCCeEEEEECCCCCEEEEecCCC-------------cEE
Q psy11518 19 SVAATSKLAA-----SSGADETVVLYDMVKRKQSGA-LMQHEGTITCLKFTPEGSHLISCSDDG-------------SIA 79 (139)
Q Consensus 19 ~~~~~~~~l~-----~~~~~~~v~i~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~-------------~i~ 79 (139)
++++||++++ .|+....|+++|+.+++.+.. +... ....++|+ |++.|+.+..+. .|.
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~ 211 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVY 211 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE-TTTEEEEEESSCCC-------CCCCEEE
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe-CCCEEEEEEecCcccccccccCCCcEEE
Confidence 4556999888 344446899999999986543 2211 12567899 999888776663 389
Q ss_pred EEEeCCceE--EEEEEeCC-CCcceeEEEEccCCcEEEEEc----CCCeEEEEEcCCC
Q psy11518 80 IFRVGSWQL--EKLFKKAH-KGTAVNHISIHPSGKLALSVG----KDKTLRTWNLVKG 130 (139)
Q Consensus 80 ~~d~~~~~~--~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~----~d~~i~i~d~~~~ 130 (139)
+|++.+... ...+.... .......+.|+|||++|+... .+..|.++|+.++
T Consensus 212 ~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 212 FHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp EEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred EEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence 999876542 23332222 112267899999999876543 2358999999776
No 223
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.67 E-value=5.7e-07 Score=64.04 Aligned_cols=110 Identities=10% Similarity=-0.012 Sum_probs=73.0
Q ss_pred EEEecCCcEEEEeCCCCe-------------EEEEEccCCce----eeEEEecCCCeEEEEECCCCCEEEEecCCC----
Q psy11518 18 RSVAATSKLAASSGADET-------------VVLYDMVKRKQ----SGALMQHEGTITCLKFTPEGSHLISCSDDG---- 76 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~-------------v~i~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---- 76 (139)
.++++||+.|+.++.+.. |.+|++.++.. +.....+...+..+.|+|+|++++..+.++
T Consensus 173 ~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 252 (695)
T 2bkl_A 173 PKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEN 252 (695)
T ss_dssp CEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEE
T ss_pred eEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCce
Confidence 455569998888877665 99999988752 222233556788999999999988776655
Q ss_pred cEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEc---CCCeEEEEEcCCCc
Q psy11518 77 SIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG---KDKTLRTWNLVKGR 131 (139)
Q Consensus 77 ~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~~ 131 (139)
.|.+++..++...... .+... +....+ +++.+++... .++.|.+||+.+++
T Consensus 253 ~l~~~~~~~~~~~~l~--~~~~~-~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 253 DVYWKRPGEKDFRLLV--KGVGA-KYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp EEEEECTTCSSCEEEE--ECSSC-CEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred EEEEEcCCCCceEEee--cCCCc-eEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 5677765555443333 22323 455556 5666444444 35889999998765
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.63 E-value=4.8e-06 Score=54.46 Aligned_cols=114 Identities=12% Similarity=0.072 Sum_probs=75.4
Q ss_pred EecCCcEEEEeC--CCCeEEEEEccCCceeeEE-------EecCCCeEEEEECCCCCEEEEecC-----CCcEEEEEeCC
Q psy11518 20 VAATSKLAASSG--ADETVVLYDMVKRKQSGAL-------MQHEGTITCLKFTPEGSHLISCSD-----DGSIAIFRVGS 85 (139)
Q Consensus 20 ~~~~~~~l~~~~--~~~~v~i~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~~~d~~~ 85 (139)
+.++++++++.. .++.+++|.+.+++. ..+ ..+-..+..++++++++++++-.. +..|..||+.+
T Consensus 24 ~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~t 102 (343)
T 2qe8_A 24 LTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLN 102 (343)
T ss_dssp ECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTT
T ss_pred ECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCC
Confidence 344788888753 233255555544432 222 124467899999999887766544 57899999999
Q ss_pred ceEEEEEEeCCC----CcceeEEEEccCC-cEEEEEc---CCCeEEEEEcCCCceeE
Q psy11518 86 WQLEKLFKKAHK----GTAVNHISIHPSG-KLALSVG---KDKTLRTWNLVKGRSAY 134 (139)
Q Consensus 86 ~~~~~~~~~~~~----~~~v~~~~~~~~~-~~l~~~~---~d~~i~i~d~~~~~~~~ 134 (139)
++....+..... ...+..+++++++ ..+++.. .++.|.+||+.+++...
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 103 NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE
T ss_pred CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE
Confidence 887776643211 1226889999864 4555555 67899999998877544
No 225
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.63 E-value=5.1e-06 Score=53.14 Aligned_cols=118 Identities=6% Similarity=0.045 Sum_probs=76.7
Q ss_pred EEEEec--CCcEEEEeCCC---------------CeEEEEEccCCceeeEEEecCCCeEEEEEC----CCCCEE-EEecC
Q psy11518 17 VRSVAA--TSKLAASSGAD---------------ETVVLYDMVKRKQSGALMQHEGTITCLKFT----PEGSHL-ISCSD 74 (139)
Q Consensus 17 v~~~~~--~~~~l~~~~~~---------------~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l-~~~~~ 74 (139)
+.++.+ ++.++++...+ +.|..++.. ++... +..+......++++ |+++.+ ++...
T Consensus 119 ~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~ 196 (314)
T 1pjx_A 119 CNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETP 196 (314)
T ss_dssp CCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETT
T ss_pred CcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECC
Confidence 344444 77777776654 567777765 44332 22333456889999 998655 45566
Q ss_pred CCcEEEEEeC-CceEEE--EEE-eCCCC-cceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 75 DGSIAIFRVG-SWQLEK--LFK-KAHKG-TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 75 d~~i~~~d~~-~~~~~~--~~~-~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
++.|.+||.. ++.... .+. ..... ..+..++++++|+++++...++.|.+||.++++.+..+
T Consensus 197 ~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~ 263 (314)
T 1pjx_A 197 TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRI 263 (314)
T ss_dssp TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEE
T ss_pred CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEE
Confidence 7889999986 444211 111 11111 23788999999998888778889999999877655443
No 226
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.56 E-value=3.1e-05 Score=52.04 Aligned_cols=109 Identities=8% Similarity=-0.023 Sum_probs=78.3
Q ss_pred EEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecC---------------CCeEEEEECCCCCEEEEec-CCCcEEE
Q psy11518 18 RSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHE---------------GTITCLKFTPEGSHLISCS-DDGSIAI 80 (139)
Q Consensus 18 ~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~---------------~~v~~~~~~~~~~~l~~~~-~d~~i~~ 80 (139)
.++.+ ++.++++-..++.|..|+.... +..+.++. .....++++|+++++++-. .++.|+.
T Consensus 272 ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 272 LIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred EEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence 44555 4667777778899999987543 33333332 3468999999999888877 8889999
Q ss_pred EEeCCceEEEEEEeCCC------------CcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 81 FRVGSWQLEKLFKKAHK------------GTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
|+..++........... -..+..+++++++.++++-..+++|+.++++
T Consensus 350 ~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 350 LDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp EETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred EECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 99877776554432100 1237899999999888888888999888763
No 227
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.55 E-value=1.3e-05 Score=51.45 Aligned_cols=108 Identities=10% Similarity=0.082 Sum_probs=69.9
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCceeeEEEec----CCCeEEEEECCCCCEEEE----ecC-------------CCc
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRKQSGALMQH----EGTITCLKFTPEGSHLIS----CSD-------------DGS 77 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~----~~~-------------d~~ 77 (139)
.+.++|+++++...++.|..|+.. ++........ ...+..+.++|+|+++++ |.. .+.
T Consensus 92 ~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~ 170 (305)
T 3dr2_A 92 AVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHS 170 (305)
T ss_dssp EECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEE
T ss_pred eECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCe
Confidence 333478877777677889999975 5432221111 123567999999998886 332 245
Q ss_pred EEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC------CeEEEEEcCCCc
Q psy11518 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD------KTLRTWNLVKGR 131 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~ 131 (139)
|..+|..+++..... .... ...++|+|+++.|+.+... +.|..|++..+.
T Consensus 171 v~~~d~~~g~~~~~~---~~~~-p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 171 VYRLPPDGSPLQRMA---DLDH-PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EEEECSSSCCCEEEE---EESS-EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred EEEEcCCCCcEEEEe---cCCC-CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 666776555543332 1222 6789999999977776554 789999987543
No 228
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.54 E-value=2.3e-05 Score=51.63 Aligned_cols=110 Identities=15% Similarity=0.137 Sum_probs=78.0
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecC---------CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHE---------GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.+..+++++.++.|..+|.++++.+....... ..+.. ....++..+..++.++.|..+|..+++..+...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 56778888889999999999999887766421 22222 122245577778888999999999999988774
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
..... ...... .+..+++++.++.|..+|.++++.+....
T Consensus 131 ~~~~~--~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~ 170 (376)
T 3q7m_A 131 VAGEA--LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVN 170 (376)
T ss_dssp CSSCC--CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCce--EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEe
Confidence 43221 111122 24577788889999999999999887664
No 229
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.53 E-value=5.9e-06 Score=55.83 Aligned_cols=91 Identities=9% Similarity=0.034 Sum_probs=68.3
Q ss_pred eeeEEEEEeecceeeEEEEecCCcEEEEeC----------CCCeEEEEEccCCceeeEEEec-------CCCeEEEEECC
Q psy11518 2 YTLTQTFVTHSHTASVRSVAATSKLAASSG----------ADETVVLYDMVKRKQSGALMQH-------EGTITCLKFTP 64 (139)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~----------~~~~v~i~~~~~~~~~~~~~~~-------~~~v~~~~~~~ 64 (139)
++.+.++...... -..++++++.++++. .++.|.++|..+.+.+.++.-- ......+.++|
T Consensus 109 ~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp 186 (426)
T 3c75_H 109 GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP 186 (426)
T ss_dssp TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT
T ss_pred CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC
Confidence 3455666654443 467778999888776 3678999999999988877532 12345789999
Q ss_pred CCCEEEEecC--CCcEEEEEeCCceEEEEEEe
Q psy11518 65 EGSHLISCSD--DGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 65 ~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~ 94 (139)
++++++.+.. ++.|.+.|+.+++....+..
T Consensus 187 DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 187 DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp TSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 9999988764 57899999999998888754
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.52 E-value=2.8e-05 Score=49.91 Aligned_cols=112 Identities=8% Similarity=-0.008 Sum_probs=76.4
Q ss_pred EEecCCc-EEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEe--C
Q psy11518 19 SVAATSK-LAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKK--A 95 (139)
Q Consensus 19 ~~~~~~~-~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~--~ 95 (139)
.+.++++ ++++...++.|..|+. +++ ...+..+...+..+.++++++++++...++.|..|+.. +........ .
T Consensus 51 ~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~ 127 (305)
T 3dr2_A 51 AWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAG 127 (305)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETT
T ss_pred eEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCC
Confidence 3445676 6778888899999997 444 44555566778999999999987777667789999976 554332211 1
Q ss_pred CCCcceeEEEEccCCcEEEE----EcC-------------CCeEEEEEcCCCcee
Q psy11518 96 HKGTAVNHISIHPSGKLALS----VGK-------------DKTLRTWNLVKGRSA 133 (139)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~ 133 (139)
.....+.+++++++|++.++ |.. .+.|..||..+++..
T Consensus 128 ~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~ 182 (305)
T 3dr2_A 128 KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ 182 (305)
T ss_dssp EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE
T ss_pred CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE
Confidence 11122678999999998886 332 256778887666543
No 231
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.52 E-value=9.8e-06 Score=56.68 Aligned_cols=91 Identities=15% Similarity=0.175 Sum_probs=63.8
Q ss_pred eEEEEEccC--Cce-eeEEEecCCCeEEEEECCCCCEEEEe-cCCCcEEEEEeCCce------------EEEEEEeCCCC
Q psy11518 35 TVVLYDMVK--RKQ-SGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQ------------LEKLFKKAHKG 98 (139)
Q Consensus 35 ~v~i~~~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~------------~~~~~~~~~~~ 98 (139)
.|.+.|..+ ++. +..+..-. ...++.++|||++++.+ ..+..|.++|+.+.+ ..... ..+
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~-~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v---~vG 330 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIAN-NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP---ELG 330 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEES-SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC---BCC
T ss_pred cEEEEeCcccCCceeEEEEecCC-CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc---CCC
Confidence 377777766 444 44444322 34789999999987655 458899999998653 22322 223
Q ss_pred cceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 99 TAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 99 ~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
..+..++|+|+|...++...|++|.+||+.+
T Consensus 331 ~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 331 LGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp SCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 3389999999995556667899999999977
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.51 E-value=4e-06 Score=56.81 Aligned_cols=115 Identities=11% Similarity=0.129 Sum_probs=80.8
Q ss_pred CCcEE-EEeCCCCeEEEEEccCC----ceeeEEE------e-cCCCeEEEEECCCCCEEEEecCC------CcEEEEEeC
Q psy11518 23 TSKLA-ASSGADETVVLYDMVKR----KQSGALM------Q-HEGTITCLKFTPEGSHLISCSDD------GSIAIFRVG 84 (139)
Q Consensus 23 ~~~~l-~~~~~~~~v~i~~~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~~~~~d------~~i~~~d~~ 84 (139)
+++++ +.+..++.|.++|+.+. +...++. . ....-..+..+|++ .++++..+ +.+.++|..
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 45554 55667889999998754 3444442 0 11134567788999 66666555 689999999
Q ss_pred CceEEEEEEeCCCC-cceeEEEEccCCcEEEEEc-------------------CCCeEEEEEcCCCceeEEEec
Q psy11518 85 SWQLEKLFKKAHKG-TAVNHISIHPSGKLALSVG-------------------KDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 85 ~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~-------------------~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+.+.+..+...... .-...+.|+|+++.+++.. .+.+|.+||+.+++.+..+.+
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 99999888433221 2134588899999888884 368999999999888777654
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.49 E-value=5.8e-06 Score=56.06 Aligned_cols=110 Identities=9% Similarity=0.111 Sum_probs=79.1
Q ss_pred EecCCcEEEEeCCC------CeEEEEEccCCceeeEEEecCC---CeEEEEECCCCCEEEEec-----------------
Q psy11518 20 VAATSKLAASSGAD------ETVVLYDMVKRKQSGALMQHEG---TITCLKFTPEGSHLISCS----------------- 73 (139)
Q Consensus 20 ~~~~~~~l~~~~~~------~~v~i~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~----------------- 73 (139)
+.++| +++++..+ +.|.++|.++.+.+.+...... .-..+.|+|+++.+++..
T Consensus 145 ~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~ 223 (462)
T 2ece_A 145 CGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLK 223 (462)
T ss_dssp ECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHH
T ss_pred ECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhh
Confidence 34577 66666555 7899999999998887763211 123577899999988885
Q ss_pred --CCCcEEEEEeCCceEEEEEEeCCCCcceeEEEE--ccCCcEEEEEc------CCCeEEEEEcCCC
Q psy11518 74 --DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISI--HPSGKLALSVG------KDKTLRTWNLVKG 130 (139)
Q Consensus 74 --~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~~------~d~~i~i~d~~~~ 130 (139)
....|.+||+.+++....+.....+.....+.| +|++++++++. .++.|.+|....+
T Consensus 224 ~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 224 DRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp HHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred hccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Confidence 367899999999988888855433333566666 99999887776 4568877766544
No 234
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.47 E-value=6.8e-06 Score=57.54 Aligned_cols=113 Identities=12% Similarity=0.081 Sum_probs=79.2
Q ss_pred CCc---EEEEeCCCCeEEEEEccCCceeeEEEecC-------------CCe--------------------------EEE
Q psy11518 23 TSK---LAASSGADETVVLYDMVKRKQSGALMQHE-------------GTI--------------------------TCL 60 (139)
Q Consensus 23 ~~~---~l~~~~~~~~v~i~~~~~~~~~~~~~~~~-------------~~v--------------------------~~~ 60 (139)
+|+ .++.++.+|.+.++|..+++.+....... .++ ..+
T Consensus 312 ~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~ 391 (571)
T 2ad6_A 312 NGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVD 391 (571)
T ss_dssp TTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBC
T ss_pred CCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCc
Confidence 563 57788999999999999998887664221 011 134
Q ss_pred EECCCCCEEEEec-------------------------------------CCCcEEEEEeCCceEEEEEEeCCCCcceeE
Q psy11518 61 KFTPEGSHLISCS-------------------------------------DDGSIAIFRVGSWQLEKLFKKAHKGTAVNH 103 (139)
Q Consensus 61 ~~~~~~~~l~~~~-------------------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~ 103 (139)
+++|+...+.... .++.|..||..+++..+.+..... +..
T Consensus 392 a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~---~~~ 468 (571)
T 2ad6_A 392 SYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFA---AWG 468 (571)
T ss_dssp EEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESSC---CCS
T ss_pred eECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCCC---ccc
Confidence 6777666655432 357899999999999888754332 222
Q ss_pred EEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 104 ISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 104 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
......+..++.++.|+.++.||.++++.+..+.+
T Consensus 469 ~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 469 GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 22223456777799999999999999999988764
No 235
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.46 E-value=1.4e-05 Score=56.91 Aligned_cols=116 Identities=10% Similarity=0.084 Sum_probs=80.7
Q ss_pred EecCCc---EEEEeCCCCeEEEEEccCCceeeEEEecCC------------Ce------------------------EEE
Q psy11518 20 VAATSK---LAASSGADETVVLYDMVKRKQSGALMQHEG------------TI------------------------TCL 60 (139)
Q Consensus 20 ~~~~~~---~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~------------~v------------------------~~~ 60 (139)
+..+++ .++.++.+|.+.++|..+++.+........ ++ ..+
T Consensus 307 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~ 386 (668)
T 1kv9_A 307 LNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSM 386 (668)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCC
T ss_pred eccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcc
Confidence 334665 688999999999999999988754432110 00 015
Q ss_pred EECCCCCEEEEe------------------------------------cCCCcEEEEEeCCceEEEEEEeCCCCcceeEE
Q psy11518 61 KFTPEGSHLISC------------------------------------SDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHI 104 (139)
Q Consensus 61 ~~~~~~~~l~~~------------------------------------~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~ 104 (139)
+++|+...+... ..+|.|..||..+++..+....... ....
T Consensus 387 a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~---~~~~ 463 (668)
T 1kv9_A 387 SFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTH---WNGG 463 (668)
T ss_dssp EEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSS---CCCC
T ss_pred eECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCC---CcCc
Confidence 666665554421 1247899999999999888754322 2333
Q ss_pred EEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 105 SIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 105 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.+...+.++++++.|+.++.||.++++.+..+.+
T Consensus 464 ~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 464 TLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeEeCCCEEEEECCcccchhhhhhcChhheEecC
Confidence 3445678888899999999999999999987753
No 236
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.44 E-value=1.1e-05 Score=57.50 Aligned_cols=115 Identities=13% Similarity=0.160 Sum_probs=82.4
Q ss_pred CcEEEEeCC------CCeEEEEEccCCceeeEEEecCCC--------------------------------eEEEEECCC
Q psy11518 24 SKLAASSGA------DETVVLYDMVKRKQSGALMQHEGT--------------------------------ITCLKFTPE 65 (139)
Q Consensus 24 ~~~l~~~~~------~~~v~i~~~~~~~~~~~~~~~~~~--------------------------------v~~~~~~~~ 65 (139)
+..+++++. ++.|..+|..+++.+..+...... ...++++|+
T Consensus 174 ~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~ 253 (677)
T 1kb0_A 174 KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAE 253 (677)
T ss_dssp TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETT
T ss_pred CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCC
Confidence 445555543 689999999999998877642211 124678888
Q ss_pred CCEEEEecCCC-------------------cEEEEEeCCceEEEEEEeCCCC-------cceeEEEEccCC---cEEEEE
Q psy11518 66 GSHLISCSDDG-------------------SIAIFRVGSWQLEKLFKKAHKG-------TAVNHISIHPSG---KLALSV 116 (139)
Q Consensus 66 ~~~l~~~~~d~-------------------~i~~~d~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~---~~l~~~ 116 (139)
+..++.+..++ .|..+|..+++.++.+...++. ..+.-+....+| ..++.+
T Consensus 254 ~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~ 333 (677)
T 1kb0_A 254 LNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHA 333 (677)
T ss_dssp TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEE
Confidence 88888776653 4999999999999998654331 112223334477 678899
Q ss_pred cCCCeEEEEEcCCCceeEEEec
Q psy11518 117 GKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 117 ~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+.+|.++++|.++|+.+..+.+
T Consensus 334 ~~~G~l~~lD~~tG~~l~~~~~ 355 (677)
T 1kb0_A 334 PKNGFFFVLDRTNGKFISAKNF 355 (677)
T ss_dssp CTTSEEEEEETTTCCEEEEEES
T ss_pred CCCCEEEEEECCCCCEeccccc
Confidence 9999999999999999877653
No 237
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.39 E-value=1.7e-05 Score=55.62 Aligned_cols=111 Identities=12% Similarity=0.112 Sum_probs=76.6
Q ss_pred cEEEEeCCCCeEEEEEccCCceeeEEEecCC------------C-e--------------------------------EE
Q psy11518 25 KLAASSGADETVVLYDMVKRKQSGALMQHEG------------T-I--------------------------------TC 59 (139)
Q Consensus 25 ~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~------------~-v--------------------------------~~ 59 (139)
..++.++.+|.+.++|..+++.+..+..... . + ..
T Consensus 337 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 416 (582)
T 1flg_A 337 KATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNP 416 (582)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSC
T ss_pred EEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCC
Confidence 3788899999999999999988876653310 0 0 12
Q ss_pred EEECCCCCEEEEec---------------------------------CCCcEEEEEeCCceEEEEEEeCCCCcceeEEEE
Q psy11518 60 LKFTPEGSHLISCS---------------------------------DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISI 106 (139)
Q Consensus 60 ~~~~~~~~~l~~~~---------------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~ 106 (139)
++++|+...+.... .+|.|..||+.+++..+....... ...-..
T Consensus 417 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~---~~~g~~ 493 (582)
T 1flg_A 417 MAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLP---LWAGVL 493 (582)
T ss_dssp CEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSC---CCSCCE
T ss_pred ceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCC---Ccccce
Confidence 45666544443321 357899999999999888754322 211111
Q ss_pred ccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 107 HPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 107 ~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
...+.+++.++.|+.++.||.++|+.+.++.+
T Consensus 494 ~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 494 ATAGNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EeCCCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 22466777899999999999999999988764
No 238
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.37 E-value=5.6e-05 Score=49.81 Aligned_cols=109 Identities=6% Similarity=0.011 Sum_probs=78.3
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCccee
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 102 (139)
.+..++.++.++.+..+|..+++.+..... .....+.. ++..+..++.++.+..+|..+++..+......... +.
T Consensus 238 ~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~-~~ 312 (376)
T 3q7m_A 238 VNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRL-LT 312 (376)
T ss_dssp ETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSC-CC
T ss_pred ECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCc-cc
Confidence 456777788899999999999988776542 23344443 45677777788999999999999888763121111 22
Q ss_pred EEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 103 HISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 103 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.... .+..++.++.+|.+.++|.++++.+....+
T Consensus 313 ~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 313 SPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp CCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 2222 256788888999999999999998877654
No 239
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.35 E-value=6.4e-05 Score=54.03 Aligned_cols=112 Identities=14% Similarity=0.135 Sum_probs=71.5
Q ss_pred EEecCCcEEEEeCCC-----CeEEEEEccCC--ceeeEEEecCCCeEEEEECCCCCEEEEecC----CCcEEEEEeCCc-
Q psy11518 19 SVAATSKLAASSGAD-----ETVVLYDMVKR--KQSGALMQHEGTITCLKFTPEGSHLISCSD----DGSIAIFRVGSW- 86 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~-----~~v~i~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~~~d~~~~- 86 (139)
.++++|++|+..+.+ ..|.+||+.++ +....+..+...+.... +|+++.|+..+. ++.|.+||+.++
T Consensus 274 ~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 352 (741)
T 1yr2_A 274 SVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGST 352 (741)
T ss_dssp EECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSS
T ss_pred EECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCc
Confidence 344589888766643 48999999877 31455555554544443 488887776554 345999998874
Q ss_pred -eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC-CCceeE
Q psy11518 87 -QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV-KGRSAY 134 (139)
Q Consensus 87 -~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~ 134 (139)
.....+ .+....+..++|. ++.++++...|+..++|.+. +++.+.
T Consensus 353 ~~~~~l~--~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~ 399 (741)
T 1yr2_A 353 PRFDTVV--PESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAG 399 (741)
T ss_dssp CEEEEEE--CCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred cccEEEe--cCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCcee
Confidence 333333 3333337778887 66778888888887777554 344443
No 240
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.34 E-value=4.1e-05 Score=54.80 Aligned_cols=105 Identities=13% Similarity=0.126 Sum_probs=75.6
Q ss_pred CCeEEEEEccCCceeeEEEecC-------------------------------CCeEEEEECCCCCEEEEecCCCc----
Q psy11518 33 DETVVLYDMVKRKQSGALMQHE-------------------------------GTITCLKFTPEGSHLISCSDDGS---- 77 (139)
Q Consensus 33 ~~~v~i~~~~~~~~~~~~~~~~-------------------------------~~v~~~~~~~~~~~l~~~~~d~~---- 77 (139)
++.|..||..+++.+..+.... ..-..++++|+...++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 6899999999999988775210 01124678888888888877753
Q ss_pred ---------------EEEEEeCCceEEEEEEeCCCC-------cceeEEEEccCCc---EEEEEcCCCeEEEEEcCCCce
Q psy11518 78 ---------------IAIFRVGSWQLEKLFKKAHKG-------TAVNHISIHPSGK---LALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 78 ---------------i~~~d~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~ 132 (139)
|..+|..+++.++.+...++. .++.-.....+|+ .++.++.+|.++++|.++|+.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 341 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGEL 341 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCE
Confidence 999999999999988543221 1122222233565 788899999999999999999
Q ss_pred eEEEe
Q psy11518 133 AYITN 137 (139)
Q Consensus 133 ~~~~~ 137 (139)
+....
T Consensus 342 l~~~~ 346 (689)
T 1yiq_A 342 LSAKG 346 (689)
T ss_dssp EEEEE
T ss_pred ecccc
Confidence 86544
No 241
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.34 E-value=9.2e-06 Score=53.93 Aligned_cols=75 Identities=7% Similarity=0.029 Sum_probs=58.7
Q ss_pred EEECCCCCEEEEecC---------CCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCc-EEEEEc-CCCeEEEEEcC
Q psy11518 60 LKFTPEGSHLISCSD---------DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK-LALSVG-KDKTLRTWNLV 128 (139)
Q Consensus 60 ~~~~~~~~~l~~~~~---------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~-~d~~i~i~d~~ 128 (139)
+.++|+++.+..+.. ++.+.++|..+.+.+..+.... ....++|+||++ .+++.. .++.|.++|+.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~ 345 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH---DSDAIIAAQDGASDNYANSAGTEVLDIYDAA 345 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE---EECEEEECCSSSCEEEEEETTTTEEEEEESS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC---CcceEEECCCCCEEEEEccCCCCeEEEEECC
Confidence 679999888775432 2356699999999888775443 288999999998 456666 59999999999
Q ss_pred CCceeEEEe
Q psy11518 129 KGRSAYITN 137 (139)
Q Consensus 129 ~~~~~~~~~ 137 (139)
+++.+..+.
T Consensus 346 t~kvv~~I~ 354 (368)
T 1mda_H 346 SDQDQSSVE 354 (368)
T ss_dssp SCEEEEECC
T ss_pred CCcEEEEEE
Confidence 999988765
No 242
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.33 E-value=0.00014 Score=46.47 Aligned_cols=94 Identities=10% Similarity=0.133 Sum_probs=66.4
Q ss_pred EEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeC--
Q psy11518 19 SVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA-- 95 (139)
Q Consensus 19 ~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~-- 95 (139)
.+.+ ++.++++...++.|..||..+++. ..+ .....+.+++++++++++++. +..|..||..+++........
T Consensus 19 ~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~-~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~ 94 (297)
T 3g4e_A 19 VWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRV-TMDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDND 94 (297)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCE-EEE-ECSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTT
T ss_pred eEECCCCEEEEEECCCCEEEEEECCCCcE-EEE-eCCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCC
Confidence 3344 566778888899999999987754 223 345678999999999966554 457999999887765443221
Q ss_pred CCCcceeEEEEccCCcEEEEE
Q psy11518 96 HKGTAVNHISIHPSGKLALSV 116 (139)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~ 116 (139)
.....+.+++++|+|+++++.
T Consensus 95 ~~~~~~~di~~d~dG~l~~~~ 115 (297)
T 3g4e_A 95 KKNNRFNDGKVDPAGRYFAGT 115 (297)
T ss_dssp CSSEEEEEEEECTTSCEEEEE
T ss_pred CCCCCCCCEEECCCCCEEEec
Confidence 122347889999999976654
No 243
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.32 E-value=0.00017 Score=46.84 Aligned_cols=118 Identities=8% Similarity=0.060 Sum_probs=72.6
Q ss_pred eEEEEec--CCcEEEEeCC------CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCcEEEEEeC--
Q psy11518 16 SVRSVAA--TSKLAASSGA------DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVG-- 84 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~------~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~-- 84 (139)
.+.++.+ +|+++++... .+.|..++ +++. ..+..+......++|+|+++.++ +...++.|.+||..
T Consensus 135 ~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~ 211 (326)
T 2ghs_A 135 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDAR 211 (326)
T ss_dssp EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTT
T ss_pred CCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccc
Confidence 4455554 7776665432 24455555 4433 23333334567899999998764 44567889999986
Q ss_pred Cc-eE--EEEEE-eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 85 SW-QL--EKLFK-KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 85 ~~-~~--~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
++ .. ...+. .......+..+++.++|.+.++...++.|..||. +++.+..+.
T Consensus 212 ~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~ 267 (326)
T 2ghs_A 212 TGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYE 267 (326)
T ss_dssp TCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEE
T ss_pred cCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEE
Confidence 44 21 11121 1112223778999999987777766788999998 566655443
No 244
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.26 E-value=0.00023 Score=46.17 Aligned_cols=96 Identities=6% Similarity=0.036 Sum_probs=63.7
Q ss_pred EEecCCcEE-EEeCCCCeEEEEEcc--CC-cee--eEEE---ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 19 SVAATSKLA-ASSGADETVVLYDMV--KR-KQS--GALM---QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 19 ~~~~~~~~l-~~~~~~~~v~i~~~~--~~-~~~--~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
+++++++.+ ++...++.|.+|++. ++ ... ..+. ........+.++++++++++...++.|..||. +++..
T Consensus 185 ~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~ 263 (326)
T 2ghs_A 185 CFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHI 263 (326)
T ss_dssp EECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEE
T ss_pred EEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEE
Confidence 444577765 455667899999985 55 321 1222 23345678999999988877766778999998 56666
Q ss_pred EEEEeCCCCcceeEEEEc-cCCcEEEEEc
Q psy11518 90 KLFKKAHKGTAVNHISIH-PSGKLALSVG 117 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~-~~~~~l~~~~ 117 (139)
..+... .. .+.+++|+ ++++.|++++
T Consensus 264 ~~i~~~-~~-~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 264 ARYEVP-GK-QTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp EEEECS-CS-BEEEEEEESTTSCEEEEEE
T ss_pred EEEECC-CC-CcEEEEEecCCCCEEEEEe
Confidence 665332 22 38999998 8877665443
No 245
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.25 E-value=9.7e-05 Score=48.29 Aligned_cols=111 Identities=10% Similarity=0.073 Sum_probs=73.2
Q ss_pred eeEEEEec--CCcEEEEeCC-----CCeEEEEEccCCceeeEEEec------CCCeEEEEECCCC-CEEEEec---CCCc
Q psy11518 15 ASVRSVAA--TSKLAASSGA-----DETVVLYDMVKRKQSGALMQH------EGTITCLKFTPEG-SHLISCS---DDGS 77 (139)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~-----~~~v~i~~~~~~~~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~---~d~~ 77 (139)
..+..+.+ +++++++-.. ++.|.+||+.+++.+..+... ...+..+++++++ ..+++.. .++.
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA 146 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe
Confidence 45666666 5666665443 578999999988876666532 2345789999754 4445555 6788
Q ss_pred EEEEEeCCceEEEEEEeCCC----------------------------CcceeEEEEccCCcEEEEEcCCC-eEEEEE
Q psy11518 78 IAIFRVGSWQLEKLFKKAHK----------------------------GTAVNHISIHPSGKLALSVGKDK-TLRTWN 126 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~~~~~----------------------------~~~v~~~~~~~~~~~l~~~~~d~-~i~i~d 126 (139)
|.+||..+++....+. .+. ...+..++|+|+++.|+.+..++ .+..++
T Consensus 147 i~v~d~~~g~~~r~~~-~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQ-GYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp EEEEETTTCCEEEECT-TCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred EEEEECCCCCEEEEec-CCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 9999998777655431 100 01257899999999888776554 555554
No 246
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.23 E-value=5.2e-05 Score=53.46 Aligned_cols=62 Identities=13% Similarity=0.054 Sum_probs=45.2
Q ss_pred CCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 74 DDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 74 ~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
..|.|..||+.+++..+....... ...-.....+..++.++.|+.++.||.++|+.+.++.+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~---~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l 512 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFA---VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKI 512 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSC---CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CcCeEEEEECCCCCEEeEecCCCC---ccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeC
Confidence 347899999999998888744321 11111222566777799999999999999999988764
No 247
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.21 E-value=0.00011 Score=52.45 Aligned_cols=105 Identities=15% Similarity=0.181 Sum_probs=75.0
Q ss_pred CCeEEEEEccCCceeeEEEecC---C----------------------------CeEEEEECCCCCEEEEecCCC-----
Q psy11518 33 DETVVLYDMVKRKQSGALMQHE---G----------------------------TITCLKFTPEGSHLISCSDDG----- 76 (139)
Q Consensus 33 ~~~v~i~~~~~~~~~~~~~~~~---~----------------------------~v~~~~~~~~~~~l~~~~~d~----- 76 (139)
++.|..+|..+++.+..+.... . ....++++|+...++.+..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 5899999999999988875310 0 011357788777887777665
Q ss_pred --------------cEEEEEeCCceEEEEEEeCCCC-------cceeEEEEccCCc---EEEEEcCCCeEEEEEcCCCce
Q psy11518 77 --------------SIAIFRVGSWQLEKLFKKAHKG-------TAVNHISIHPSGK---LALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 77 --------------~i~~~d~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~---~l~~~~~d~~i~i~d~~~~~~ 132 (139)
.|..+|..+++.++.+...++. .++....+..+++ .++.++.+|.++++|.++|+.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 3999999999999998654321 1222223334665 688899999999999999999
Q ss_pred eEEEe
Q psy11518 133 AYITN 137 (139)
Q Consensus 133 ~~~~~ 137 (139)
+....
T Consensus 337 l~~~~ 341 (668)
T 1kv9_A 337 ISAEK 341 (668)
T ss_dssp EEEEE
T ss_pred ecccc
Confidence 85543
No 248
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.16 E-value=3.2e-05 Score=55.78 Aligned_cols=111 Identities=13% Similarity=0.056 Sum_probs=71.0
Q ss_pred eEEEEe-cCCcEEEEeC-----CCCeEEEEEccCC-ceee-EEEecCCCeEEEEECCCCCEEEEecCC-----CcEEEEE
Q psy11518 16 SVRSVA-ATSKLAASSG-----ADETVVLYDMVKR-KQSG-ALMQHEGTITCLKFTPEGSHLISCSDD-----GSIAIFR 82 (139)
Q Consensus 16 ~v~~~~-~~~~~l~~~~-----~~~~v~i~~~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d 82 (139)
.-..++ +||++|+-+. ....|.++|+.++ +.+. .+... ...++|+|+++.|+....+ ..|..++
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~---~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGT---NGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEE---CSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCc---eeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 345778 8898877432 2236999999988 6332 12211 2467899999888766554 2577788
Q ss_pred eCCce--EEEEEEeCCCCcceeEEEEccCCcEEEEEc---CCCeEEEEEcCCC
Q psy11518 83 VGSWQ--LEKLFKKAHKGTAVNHISIHPSGKLALSVG---KDKTLRTWNLVKG 130 (139)
Q Consensus 83 ~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~i~d~~~~ 130 (139)
+.++. ....+....... ...+.|+|||++|+... ....|.++|+.++
T Consensus 254 lgt~~~~~~lv~~~~~~~~-~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLF-SAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp TTSCGGGCEEEEECCCTTC-EEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred CCCCchhcEEEEecCCCce-EEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 76653 223332222222 56789999999887655 3456888899875
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.09 E-value=0.00015 Score=50.86 Aligned_cols=105 Identities=13% Similarity=0.104 Sum_probs=75.3
Q ss_pred cCCcEEEEeC------------------CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCC-------
Q psy11518 22 ATSKLAASSG------------------ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG------- 76 (139)
Q Consensus 22 ~~~~~l~~~~------------------~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~------- 76 (139)
++++++++++ .++.+.+.|.++.+...++.--. ....++.+|+++++++.+.+.
T Consensus 145 p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~ 223 (595)
T 1fwx_A 145 PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLP 223 (595)
T ss_dssp SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHH
T ss_pred CCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchh
Confidence 5788888773 34689999999998888876433 346778999999988776443
Q ss_pred -------------------------------cEEEEEeCC--ceE-EEEEEeCCCCcceeEEEEccCCcEEEEEc-CCCe
Q psy11518 77 -------------------------------SIAIFRVGS--WQL-EKLFKKAHKGTAVNHISIHPSGKLALSVG-KDKT 121 (139)
Q Consensus 77 -------------------------------~i~~~d~~~--~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~ 121 (139)
.|.+.|..+ +.. ...+.... .+.++.++|||+++++++ .+.+
T Consensus 224 ~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~---~PhGv~~sPDGk~v~V~~~~s~~ 300 (595)
T 1fwx_A 224 EMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIAN---NPHGCNMAPDKKHLCVAGKLSPT 300 (595)
T ss_dssp HHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEES---SCCCEEECTTSSEEEEECTTSSB
T ss_pred hccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCC---CceEEEEcCCCCEEEEeCCCCCe
Confidence 366666665 333 34442222 267799999999877766 6889
Q ss_pred EEEEEcCCC
Q psy11518 122 LRTWNLVKG 130 (139)
Q Consensus 122 i~i~d~~~~ 130 (139)
|.++|+.+.
T Consensus 301 VsVid~~~~ 309 (595)
T 1fwx_A 301 VTVLDVTRF 309 (595)
T ss_dssp EEEEEGGGH
T ss_pred EEEEECccc
Confidence 999999864
No 250
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.04 E-value=0.00022 Score=45.87 Aligned_cols=104 Identities=11% Similarity=0.096 Sum_probs=72.0
Q ss_pred CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeE
Q psy11518 24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH 103 (139)
Q Consensus 24 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~ 103 (139)
+..+..++.++.|..+|.. ++...........+.++...+++. +..++.++.|..+|.. ++....+... ...+.+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~--~~~~~~ 181 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTN--DAITSA 181 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECS--SCCCSC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecC--CCceee
Confidence 5567778888899999987 777766665555556667776776 4456677889999988 7777666332 222666
Q ss_pred EEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 104 ISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 104 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+...+++.+.+ ++ +.+..+| .+++.+...
T Consensus 182 ~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~ 210 (330)
T 3hxj_A 182 ASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNF 210 (330)
T ss_dssp CEECTTCCEEE-ES--SSEEEEC-TTSCEEEEE
T ss_pred eEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEE
Confidence 77777776444 44 7788889 777666554
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.01 E-value=0.00033 Score=44.98 Aligned_cols=104 Identities=10% Similarity=0.050 Sum_probs=71.7
Q ss_pred CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeE
Q psy11518 24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNH 103 (139)
Q Consensus 24 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~ 103 (139)
+..+..++.++.|..+|.. ++.+..+......+.++...+++..++.. +.|..+| .+++........ . ..+.+
T Consensus 147 ~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~-~-~~~~~ 219 (330)
T 3hxj_A 147 DGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAG-Y-WTVTR 219 (330)
T ss_dssp TSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCS-S-CCCSC
T ss_pred CCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccC-C-cceec
Confidence 4446667888999999988 77777766555566777777787766554 7799999 777777666322 2 33777
Q ss_pred EEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 104 ISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 104 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
+...+++. +..++.++.+..+|. +++.+..+
T Consensus 220 ~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~ 250 (330)
T 3hxj_A 220 PAISEDGT-IYVTSLDGHLYAINP-DGTEKWRF 250 (330)
T ss_dssp CEECTTSC-EEEEETTTEEEEECT-TSCEEEEE
T ss_pred eEECCCCe-EEEEcCCCeEEEECC-CCCEeEEe
Confidence 88887775 455566777888874 55555443
No 252
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.98 E-value=0.00054 Score=48.73 Aligned_cols=115 Identities=7% Similarity=0.010 Sum_probs=74.1
Q ss_pred EEec-CCcEEEEeCCCC-----------eEEEEEccCCce--eeEEEe-cCCCeEEEEECCCCCEEEEecC-CCcEEEEE
Q psy11518 19 SVAA-TSKLAASSGADE-----------TVVLYDMVKRKQ--SGALMQ-HEGTITCLKFTPEGSHLISCSD-DGSIAIFR 82 (139)
Q Consensus 19 ~~~~-~~~~l~~~~~~~-----------~v~i~~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d~~i~~~d 82 (139)
++.+ ++++++.|+.+. .+.+||+.+++- +..+.. +.....+.++.++++.++.|+. +..+.+||
T Consensus 192 av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd 271 (656)
T 1k3i_A 192 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYD 271 (656)
T ss_dssp EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEE
T ss_pred EEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEec
Confidence 4445 788888876432 688999887642 223322 2223345677889999998884 45799999
Q ss_pred eCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEc-CC-----CeEEEEEcCCCceeE
Q psy11518 83 VGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVG-KD-----KTLRTWNLVKGRSAY 134 (139)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-----~~i~i~d~~~~~~~~ 134 (139)
..+.+....-....... -.+++..+++++++.|+ .+ ..+.+||..+.+...
T Consensus 272 ~~t~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~ 328 (656)
T 1k3i_A 272 SSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS 328 (656)
T ss_dssp GGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE
T ss_pred CcCCceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee
Confidence 88765443321111111 23456667999999998 34 569999998876543
No 253
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.95 E-value=0.00079 Score=47.56 Aligned_cols=106 Identities=10% Similarity=0.047 Sum_probs=73.9
Q ss_pred CCCeEEEEEccCCceeeEEEecCCC-------------------------------------e-EEEEECCCCCEEEEec
Q psy11518 32 ADETVVLYDMVKRKQSGALMQHEGT-------------------------------------I-TCLKFTPEGSHLISCS 73 (139)
Q Consensus 32 ~~~~v~i~~~~~~~~~~~~~~~~~~-------------------------------------v-~~~~~~~~~~~l~~~~ 73 (139)
.++.|..+|.++++.+..+...... + ...++.++...+..+.
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 3789999999999998877642211 0 1245566666666665
Q ss_pred CC----------------CcEEEEEeCCceEEEEEEeCCCCc-------ceeEEEEc-cCC---cEEEEEcCCCeEEEEE
Q psy11518 74 DD----------------GSIAIFRVGSWQLEKLFKKAHKGT-------AVNHISIH-PSG---KLALSVGKDKTLRTWN 126 (139)
Q Consensus 74 ~d----------------~~i~~~d~~~~~~~~~~~~~~~~~-------~v~~~~~~-~~~---~~l~~~~~d~~i~i~d 126 (139)
.+ +.|..+|..+++.++.+...++.. ...-+... .+| +.++.++.+|.+.++|
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD 339 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLD 339 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEE
T ss_pred CCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEE
Confidence 54 379999999999999986554321 11112222 467 5677788999999999
Q ss_pred cCCCceeEEEe
Q psy11518 127 LVKGRSAYITN 137 (139)
Q Consensus 127 ~~~~~~~~~~~ 137 (139)
.++|+.+....
T Consensus 340 ~~tG~~lw~~~ 350 (599)
T 1w6s_A 340 RTDGALVSANK 350 (599)
T ss_dssp TTTCCEEEEEE
T ss_pred CCCCCEeeccc
Confidence 99999987765
No 254
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.88 E-value=0.00033 Score=50.10 Aligned_cols=110 Identities=12% Similarity=0.063 Sum_probs=71.6
Q ss_pred EecCCc-EEEEeCC---CCeEEEEEccCCce--eeEEEecCCCeEEEEECCCCCEEEEecC-CC--cEEEEEeCCceEEE
Q psy11518 20 VAATSK-LAASSGA---DETVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSD-DG--SIAIFRVGSWQLEK 90 (139)
Q Consensus 20 ~~~~~~-~l~~~~~---~~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~--~i~~~d~~~~~~~~ 90 (139)
+.+++. +++.... .+.|..+++.++.. ...+..|...+. .|+++++.|+.... ++ .|.+||+..+. ..
T Consensus 287 ~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~-~~ 363 (693)
T 3iuj_A 287 VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGKR-VR 363 (693)
T ss_dssp EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSCE-EE
T ss_pred EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCCe-eE
Confidence 344444 4445444 36899999887654 345666665554 88888888775554 44 58888887543 34
Q ss_pred EEEeCCCCcceeEEEEccCCcEEEEEcCC----CeEEEEEcCCCcee
Q psy11518 91 LFKKAHKGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVKGRSA 133 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~ 133 (139)
.+....... +..+.+++++..++....+ +.+..||+.+++..
T Consensus 364 ~l~~p~~~~-~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~~ 409 (693)
T 3iuj_A 364 EVALPGLGS-VSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAIS 409 (693)
T ss_dssp EECCSSSSE-EEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCEE
T ss_pred EeecCCCce-EEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeEE
Confidence 443344444 7778888888866655443 78999999887643
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.82 E-value=0.0024 Score=44.82 Aligned_cols=115 Identities=11% Similarity=0.049 Sum_probs=76.1
Q ss_pred CcEEEEeCC------CCeEEEEEccCCceeeEEEecCCC-------------------------------------e-EE
Q psy11518 24 SKLAASSGA------DETVVLYDMVKRKQSGALMQHEGT-------------------------------------I-TC 59 (139)
Q Consensus 24 ~~~l~~~~~------~~~v~i~~~~~~~~~~~~~~~~~~-------------------------------------v-~~ 59 (139)
+..+++++. ++.|..+|..+++.+..+...... + ..
T Consensus 160 ~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~ 239 (571)
T 2ad6_A 160 KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGW 239 (571)
T ss_dssp TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSC
T ss_pred CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeee
Confidence 345555554 789999999999998877632110 0 12
Q ss_pred EEECCCCCEEEEecCC----------------CcEEEEEeCCceEEEEEEeCCCC-------cceeEEEEccCCc---EE
Q psy11518 60 LKFTPEGSHLISCSDD----------------GSIAIFRVGSWQLEKLFKKAHKG-------TAVNHISIHPSGK---LA 113 (139)
Q Consensus 60 ~~~~~~~~~l~~~~~d----------------~~i~~~d~~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~---~l 113 (139)
+++.++...+..+..+ +.|..+|..+++.++.+...++. ....-+...++|+ .+
T Consensus 240 ~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v 319 (571)
T 2ad6_A 240 YAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLL 319 (571)
T ss_dssp CEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEE
T ss_pred EEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEE
Confidence 4566655566555432 25999999999999988654221 1122223334674 57
Q ss_pred EEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 114 LSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 114 ~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+.++.+|.++++|.++++.+....+
T Consensus 320 ~~~~~~G~l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 320 SHIDRNGILYTLNRENGNLIVAEKV 344 (571)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEES
T ss_pred EEeCCCcEEEEEECCCCCEEeeecc
Confidence 7888899999999999999877653
No 256
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.81 E-value=0.0021 Score=45.23 Aligned_cols=63 Identities=6% Similarity=0.066 Sum_probs=45.4
Q ss_pred CcEEEEEeCCceEEEEEEeCCCC-------cceeEEEEc-cCCc---EEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 76 GSIAIFRVGSWQLEKLFKKAHKG-------TAVNHISIH-PSGK---LALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 76 ~~i~~~d~~~~~~~~~~~~~~~~-------~~v~~~~~~-~~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+.|..+|..+++.++.+...++. ....-+... .+|+ .++.++.+|.++++|.++|+.+....+
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 57999999999999998654321 111112222 4663 788899999999999999999877654
No 257
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.80 E-value=0.003 Score=42.78 Aligned_cols=72 Identities=18% Similarity=0.252 Sum_probs=51.9
Q ss_pred CeEEEEECC-CCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcC
Q psy11518 56 TITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLV 128 (139)
Q Consensus 56 ~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~ 128 (139)
....++++| ++.++++-..++.|..++...+............. ...++|+|+++ ++++-...+.|..++..
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~-P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGW-EFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSC-CEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCc-ceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 346788999 77777777778899999988766533332222222 78899999999 45555677889998765
No 258
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.74 E-value=0.0025 Score=39.97 Aligned_cols=114 Identities=10% Similarity=-0.024 Sum_probs=70.1
Q ss_pred EEecCCcEE-EEeCC--CCeEEEEEccCCceeeEEE-ecCCCeEEEEECCCCCEE-EEecCCCcEEEEEeCCceEEEEEE
Q psy11518 19 SVAATSKLA-ASSGA--DETVVLYDMVKRKQSGALM-QHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 19 ~~~~~~~~l-~~~~~--~~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
++.+++..+ ++... .+.|..+++... ....+. ..-.....+++++++..| ++-...+.|..+|..........
T Consensus 128 ~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~- 205 (267)
T 1npe_A 128 VTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVL- 205 (267)
T ss_dssp EEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEE-
T ss_pred EEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEe-
Confidence 344444444 44333 468888887543 223332 223456889999976655 55556788999998754433333
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEe
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (139)
. .... +..++.. ++..+++....+.|..+|..+++.+..+.
T Consensus 206 ~-~~~~-P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 206 E-GLQY-PFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp E-CCCS-EEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred c-CCCC-ceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 2 2222 5667764 45555555567899999999998877664
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.68 E-value=0.0036 Score=40.17 Aligned_cols=109 Identities=13% Similarity=0.092 Sum_probs=70.2
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCC--cEEEEEeCCceEEEEEEeCC
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDG--SIAIFRVGSWQLEKLFKKAH 96 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~~~~~ 96 (139)
.+.+++.++++-..++.|..||.... ....+. .......++++++++++++..... .|..+|..+++.........
T Consensus 38 a~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~ 115 (306)
T 2p4o_A 38 ASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPD 115 (306)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred EECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCC
Confidence 34447887777778899999997653 332222 334678999999999766554322 46677777777654443222
Q ss_pred CCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 97 KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 97 ~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
... ...++..+++..+++...++.|..+|..++
T Consensus 116 ~~~-~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 116 AIF-LNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp CSC-EEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred ccc-cCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 222 455665666665666656889999998764
No 260
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.61 E-value=0.00044 Score=45.42 Aligned_cols=114 Identities=10% Similarity=0.012 Sum_probs=74.8
Q ss_pred CcEEEEeCCCCeEEEEEccCCceeeEEEec-CCCeEEEEEC--C-CCCEEEEe-cCCCcEEEEEeCCceEEEEEEeCCCC
Q psy11518 24 SKLAASSGADETVVLYDMVKRKQSGALMQH-EGTITCLKFT--P-EGSHLISC-SDDGSIAIFRVGSWQLEKLFKKAHKG 98 (139)
Q Consensus 24 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~--~-~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~~~~ 98 (139)
+..++.++.||.|.-.|.++|+.+..++.. ..++....-. + ++..++.. ..||.|..++..++.....+..+...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 457889999999999999999999888754 1222221100 1 22333343 68999999999888666554322110
Q ss_pred cceeEEEEc-----------cCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 99 TAVNHISIH-----------PSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 99 ~~v~~~~~~-----------~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
. ..-+... ..+..+++++.++++...|+++|+.+..+..
T Consensus 90 ~-~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 S-TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp T-TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred e-ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 0 0001111 1456788999999999999999999988753
No 261
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.57 E-value=0.0063 Score=40.21 Aligned_cols=111 Identities=14% Similarity=0.157 Sum_probs=75.5
Q ss_pred EEEEeCCCCeEEEEEcc-------CCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeC-----CceEEEEEE
Q psy11518 26 LAASSGADETVVLYDMV-------KRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVG-----SWQLEKLFK 93 (139)
Q Consensus 26 ~l~~~~~~~~v~i~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~-----~~~~~~~~~ 93 (139)
++++...+|.+..|++. +.+.+.++.. .+.+..|...+....|..+-.+.-|..++.+ +++.+..+.
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec
Confidence 67888888999999983 2345566654 4567888999888889888887656666644 344554442
Q ss_pred eCCCCcceeEEEE--ccCCc-EEEEEc-CCCeEEEEEcC-CCceeEEEe
Q psy11518 94 KAHKGTAVNHISI--HPSGK-LALSVG-KDKTLRTWNLV-KGRSAYITN 137 (139)
Q Consensus 94 ~~~~~~~v~~~~~--~~~~~-~l~~~~-~d~~i~i~d~~-~~~~~~~~~ 137 (139)
..+-...+..|++ .++++ +|++++ .+....+||.+ +.+.+..+.
T Consensus 224 ~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 224 GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 2333323788887 45555 555555 67899999997 667776664
No 262
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.54 E-value=0.0061 Score=41.28 Aligned_cols=109 Identities=16% Similarity=0.196 Sum_probs=66.0
Q ss_pred EEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC-CC----cEEEEEeCCceEE--E
Q psy11518 19 SVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD-DG----SIAIFRVGSWQLE--K 90 (139)
Q Consensus 19 ~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~----~i~~~d~~~~~~~--~ 90 (139)
++.+ ++..|+++...+.|+.+|+..+.... +.........++|+++++.|..+.. ++ .+..++ ..+... .
T Consensus 143 avdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g~~~~~~ 220 (430)
T 3tc9_A 143 SFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RESGFKVIT 220 (430)
T ss_dssp EEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGGTSCSEE
T ss_pred EECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCCceeeee
Confidence 4444 24455555444889999987665433 3334455789999999995555443 22 233333 223221 2
Q ss_pred EEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 91 LFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 91 ~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
.+.. ... +..++++| ++.++++-..+++|..++...+..
T Consensus 221 ~l~~--~~~-p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 221 ELTK--GQN-CNGAETHPINGELYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp EEEE--CSS-CCCEEECTTTCCEEEEETTTTEEEEEETTTTEE
T ss_pred eecc--CCC-ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE
Confidence 2211 122 57789999 777777777788999999987654
No 263
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.46 E-value=0.008 Score=38.73 Aligned_cols=102 Identities=7% Similarity=-0.006 Sum_probs=63.3
Q ss_pred CcEEEEeCCCCeEEEEEccCCceeeEEEe-----cCCCeEEEEECC-CCCEEEEecC-----------------CCcEEE
Q psy11518 24 SKLAASSGADETVVLYDMVKRKQSGALMQ-----HEGTITCLKFTP-EGSHLISCSD-----------------DGSIAI 80 (139)
Q Consensus 24 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------d~~i~~ 80 (139)
+..|+++...+.|..+|..++.. ..+.. .......+++.+ +++.+++-.. ++.|..
T Consensus 91 ~g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 91 NNQLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TTEEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred CCcEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 34444444345588888765432 22211 113467899999 8987776432 366888
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEE-cCCCeEEEEEcCC
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSV-GKDKTLRTWNLVK 129 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~ 129 (139)
+|..+++....... ... ...++++|+++.++.+ ...+.|..|++..
T Consensus 170 ~d~~~~~~~~~~~~--~~~-p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 170 YDPSTKETTLLLKE--LHV-PGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp EETTTTEEEEEEEE--ESC-CCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred EeCCCCEEEEeccC--Ccc-CcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 88776664433211 112 5779999999865544 6678999999875
No 264
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.41 E-value=0.0083 Score=37.85 Aligned_cols=78 Identities=10% Similarity=0.139 Sum_probs=59.7
Q ss_pred ecCCCeEEEEECCCCC-EEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 52 QHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 52 ~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
+-...+..++|+|++. ++++...++.|...|.. ++....+....... ...+++.+++.++++.-.++.+.++++...
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D-~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKD-LETIEYIGDNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSS-EEEEEECSTTEEEEEETTTTEEEEEEECTT
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCC-hHHeEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 4445789999999765 45567778889999988 78777775544444 788999999987777667788999988765
Q ss_pred c
Q psy11518 131 R 131 (139)
Q Consensus 131 ~ 131 (139)
.
T Consensus 102 ~ 102 (255)
T 3qqz_A 102 S 102 (255)
T ss_dssp C
T ss_pred C
Confidence 5
No 265
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.28 E-value=0.012 Score=36.80 Aligned_cols=104 Identities=11% Similarity=0.044 Sum_probs=65.5
Q ss_pred CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCE-EEEecCCCcEEEEEeCCceEEEEEEeCCCCccee
Q psy11518 24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSH-LISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 24 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~ 102 (139)
+.++++-..++.|..+++..................+++++++.. +++....+.|.+++.......... ..... ...
T Consensus 48 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~-~~~~~-~P~ 125 (267)
T 1npe_A 48 KVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF-DTGLV-NPR 125 (267)
T ss_dssp TEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSSCS-SEE
T ss_pred CEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEE-ECCCC-Ccc
Confidence 445556667889999998765443333222246789999986554 455566778999998654322222 22222 378
Q ss_pred EEEEccCCcEEEEEc-C--CCeEEEEEcCC
Q psy11518 103 HISIHPSGKLALSVG-K--DKTLRTWNLVK 129 (139)
Q Consensus 103 ~~~~~~~~~~l~~~~-~--d~~i~i~d~~~ 129 (139)
.++++|++..++.+. . .+.|..+++..
T Consensus 126 ~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp EEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred EEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 999999655544443 3 46888888754
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.25 E-value=0.015 Score=37.27 Aligned_cols=76 Identities=13% Similarity=0.150 Sum_probs=53.5
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC--CeEEEEEcCCCce
Q psy11518 55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD--KTLRTWNLVKGRS 132 (139)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~~~ 132 (139)
.....++|+++++.+++...++.|..||.... ....+... . .+..+++.++++++++.... ..|..+|..+++.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~~--~-~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATVE--G-KVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEECS--S-EEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeCC--C-CceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 45678999999997777778889999987653 33333222 2 38899999999976665432 3577778777765
Q ss_pred eE
Q psy11518 133 AY 134 (139)
Q Consensus 133 ~~ 134 (139)
..
T Consensus 108 ~~ 109 (306)
T 2p4o_A 108 ET 109 (306)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 267
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.24 E-value=0.016 Score=37.32 Aligned_cols=99 Identities=11% Similarity=0.111 Sum_probs=61.4
Q ss_pred CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEe-cCCCcEEEEEeCCce--EEEEEEeCCCCcceeEEEEccC
Q psy11518 33 DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQ--LEKLFKKAHKGTAVNHISIHPS 109 (139)
Q Consensus 33 ~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~--~~~~~~~~~~~~~v~~~~~~~~ 109 (139)
++.|..+|..+++....... -.....++++|+++.+..+ ...+.|..|++.... ....+.. ... +..+++.++
T Consensus 164 ~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 164 TGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNAD 239 (322)
T ss_dssp CEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTT
T ss_pred CceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCC
Confidence 36788888766654332222 1234678999999865544 566889999987421 1122211 122 678999999
Q ss_pred CcEEEEEcC----------CCeEEEEEcCCCceeEEE
Q psy11518 110 GKLALSVGK----------DKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 110 ~~~l~~~~~----------d~~i~i~d~~~~~~~~~~ 136 (139)
|++.++... .+.|..+|.. ++.+..+
T Consensus 240 G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~ 275 (322)
T 2fp8_A 240 GHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVI 275 (322)
T ss_dssp SCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEE
T ss_pred CCEEEEecCcccccccCCCccEEEEECCC-CCEEEEE
Confidence 986666544 4668888863 6655544
No 268
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.20 E-value=0.023 Score=38.59 Aligned_cols=106 Identities=11% Similarity=0.151 Sum_probs=71.0
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEec----CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce-----------
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQH----EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ----------- 87 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~----------- 87 (139)
++..++.+- ++.||.-++.....-+.++-. -..+..+..+|+|++||..+.. .|.+..+..+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCcccccccc
Confidence 555555444 377888787654433344322 2257789999999999988654 68888876321
Q ss_pred -EEEEEEeCC----CCcceeEEEEcc---CCcEEEEEcCCCeEEEEEcCCC
Q psy11518 88 -LEKLFKKAH----KGTAVNHISIHP---SGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 88 -~~~~~~~~~----~~~~v~~~~~~~---~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
....+.... ...+|..+.||| ++..|++-..|+.|++||+...
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 122332221 134599999999 4568999999999999999864
No 269
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.20 E-value=0.019 Score=37.60 Aligned_cols=98 Identities=9% Similarity=0.154 Sum_probs=68.4
Q ss_pred CCeEEEEEcc---CCceeeEEE--e-----------cCCCeEEEEECCCCCEEEEecCC-CcEEEEEeCCceEEEEE-Ee
Q psy11518 33 DETVVLYDMV---KRKQSGALM--Q-----------HEGTITCLKFTPEGSHLISCSDD-GSIAIFRVGSWQLEKLF-KK 94 (139)
Q Consensus 33 ~~~v~i~~~~---~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~l~~~~~d-~~i~~~d~~~~~~~~~~-~~ 94 (139)
+..|..||+. +++.+.... . -......++..++|+..++++.. +.|...+.......... ..
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~ 178 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES 178 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC
Confidence 6789999998 777765544 1 11247889999999999988887 77777776543222111 11
Q ss_pred --CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 95 --AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 95 --~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
.....-.+.|+++|++..|++....+.|.-+|+++.
T Consensus 179 ~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 179 GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 111112679999999998888877999999998743
No 270
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.17 E-value=0.017 Score=36.42 Aligned_cols=115 Identities=9% Similarity=0.069 Sum_probs=76.1
Q ss_pred cceeeEEEEec--C-CcEEEEeCCCCeEEEEEccCCceeeEEEe-cCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 12 SHTASVRSVAA--T-SKLAASSGADETVVLYDMVKRKQSGALMQ-HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 12 ~~~~~v~~~~~--~-~~~l~~~~~~~~v~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
+....+..+++ + +.++++...++.|...|+. ++.+..+.- -......+++.+++.++++.-.++.+.++++....
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS 102 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC
Confidence 43345666665 4 4456667788999999987 777776642 22456889999888877776677889999886544
Q ss_pred E---EEEEEeC-----CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 88 L---EKLFKKA-----HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 88 ~---~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
. ....... .+.. ...++|+|.++.|+++.+.....+|.+.
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g-~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCG-FEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSC-CEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred eeeeeeeeccccccccccCC-cceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 2 2222211 1222 6899999999877777765555555553
No 271
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.17 E-value=0.025 Score=38.35 Aligned_cols=73 Identities=12% Similarity=0.104 Sum_probs=50.0
Q ss_pred CeEEEEECC-CCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcC
Q psy11518 56 TITCLKFTP-EGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLV 128 (139)
Q Consensus 56 ~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~ 128 (139)
....++++| ++.++++-..++.|..+|..++.....+...........++|+|+++ ++++-...+.|+.+++.
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 346788999 67776676678889999988676633321222222245799999998 45555667889998865
No 272
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.16 E-value=0.026 Score=38.38 Aligned_cols=107 Identities=10% Similarity=0.138 Sum_probs=70.9
Q ss_pred EEEecCCcEEEEeCCCCeEEEEEccCCc------------eeeEEEe------cCCCeEEEEECC---CCCEEEEecCCC
Q psy11518 18 RSVAATSKLAASSGADETVVLYDMVKRK------------QSGALMQ------HEGTITCLKFTP---EGSHLISCSDDG 76 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~------------~~~~~~~------~~~~v~~~~~~~---~~~~l~~~~~d~ 76 (139)
..++++|.+||..+. ..|.|-.+..+. ....+.- ...+|..+.|+| .+..|++-..|+
T Consensus 71 lvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~ 149 (452)
T 3pbp_A 71 VISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDD 149 (452)
T ss_dssp EEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTS
T ss_pred EEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCC
Confidence 455668999988864 578888876321 1122332 246799999999 467899999999
Q ss_pred cEEEEEeCCce--EEEEE-------EeCCCCcceeEEEEccCCcEEEEEc--CCCeEEEEE
Q psy11518 77 SIAIFRVGSWQ--LEKLF-------KKAHKGTAVNHISIHPSGKLALSVG--KDKTLRTWN 126 (139)
Q Consensus 77 ~i~~~d~~~~~--~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~i~d 126 (139)
.|++||+.... +. .+ ........+.+++|.+++-.|.... ..|.|+-..
T Consensus 150 ~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 150 TITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp CEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred EEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 99999997522 11 22 1111113488999999887666644 777766543
No 273
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.13 E-value=0.015 Score=38.45 Aligned_cols=100 Identities=14% Similarity=0.276 Sum_probs=64.1
Q ss_pred CcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCC----CC---EEEEec-C--CCcEEEEEeC--CceEEEE
Q psy11518 24 SKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE----GS---HLISCS-D--DGSIAIFRVG--SWQLEKL 91 (139)
Q Consensus 24 ~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~-~--d~~i~~~d~~--~~~~~~~ 91 (139)
..+++.....+-+.+||+ +++.+..+.. +.++.+...|+ ++ ++++.. . ++.|.+|++. ++. +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 345665566778999999 8888887753 56677776663 22 233333 3 5789999873 333 333
Q ss_pred EEe---C--CCCcceeEEEE--ccC-Cc-EEEEEcCCCeEEEEEc
Q psy11518 92 FKK---A--HKGTAVNHISI--HPS-GK-LALSVGKDKTLRTWNL 127 (139)
Q Consensus 92 ~~~---~--~~~~~v~~~~~--~~~-~~-~l~~~~~d~~i~i~d~ 127 (139)
+.. + .....+..+|+ +|. ++ ++++...+|.+..|++
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l 160 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYEL 160 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEE
Confidence 311 1 11133777888 774 43 6778888899999988
No 274
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.12 E-value=0.024 Score=37.25 Aligned_cols=111 Identities=12% Similarity=0.029 Sum_probs=67.4
Q ss_pred EEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEE-EEecCC-CcEEEEEeCCceEEEEEEe
Q psy11518 18 RSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDD-GSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 18 ~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d-~~i~~~d~~~~~~~~~~~~ 94 (139)
.++.+ .+.+..+-...+.|.+.+++.......+...-.....++++|.+..+ .+-... +.|..++.......... .
T Consensus 121 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~ 199 (349)
T 3v64_C 121 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA-D 199 (349)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESC-C
T ss_pred EEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEE-E
Confidence 34445 45555666677888888876543333333333456899999855544 444444 67888887643322222 1
Q ss_pred CCCCcceeEEEEccCCcE-EEEEcCCCeEEEEEcCCC
Q psy11518 95 AHKGTAVNHISIHPSGKL-ALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~ 130 (139)
. .......++++|++.. +++-...+.|..+|+...
T Consensus 200 ~-~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 200 T-HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp S-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred C-CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 1 2223789999986554 455556788999998654
No 275
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.91 E-value=0.038 Score=40.10 Aligned_cols=109 Identities=8% Similarity=-0.005 Sum_probs=62.3
Q ss_pred EecCCcEEEEeCCC-----CeEEEEEccCCce--eeEEEe-cCCCeEEEEECCCCCEEEEecC---CCcEEEEEeCCc--
Q psy11518 20 VAATSKLAASSGAD-----ETVVLYDMVKRKQ--SGALMQ-HEGTITCLKFTPEGSHLISCSD---DGSIAIFRVGSW-- 86 (139)
Q Consensus 20 ~~~~~~~l~~~~~~-----~~v~i~~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---d~~i~~~d~~~~-- 86 (139)
+++|++.|+....+ ..|..+++.++.. ...+.. .......+.|+|++++|+.... ...|.++|+.++
T Consensus 228 WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~ 307 (751)
T 2xe4_A 228 WGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA 307 (751)
T ss_dssp ECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT
T ss_pred EecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC
Confidence 44488776655543 3677788876642 223332 2234567899999998875442 345888888765
Q ss_pred eE-EEEEEeCCCCcceeEEEEccCCcEEEEEcCC----CeEEEEEcCC
Q psy11518 87 QL-EKLFKKAHKGTAVNHISIHPSGKLALSVGKD----KTLRTWNLVK 129 (139)
Q Consensus 87 ~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~i~d~~~ 129 (139)
.. ...+ ..........+.|+.++.+++....+ ..|..+|+.+
T Consensus 308 ~~~~~~l-~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 308 HNTLEIV-RPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CCCEEES-SCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CceeEEe-ecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 22 0222 22223335566665555555555443 3677777764
No 276
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.81 E-value=0.053 Score=36.13 Aligned_cols=110 Identities=13% Similarity=0.069 Sum_probs=66.2
Q ss_pred EEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCC-CcEEEEEeCCceEEEEEEeC
Q psy11518 19 SVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDD-GSIAIFRVGSWQLEKLFKKA 95 (139)
Q Consensus 19 ~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d-~~i~~~d~~~~~~~~~~~~~ 95 (139)
++.+ .+.+.++-...+.|.+.++........+...-.....++++|.+..|. +-... +.|..++.......... ..
T Consensus 165 avd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~~ 243 (386)
T 3v65_B 165 AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA-DT 243 (386)
T ss_dssp EEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CS
T ss_pred EEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE-EC
Confidence 4444 455556666677788877754433333333334568899998665554 44344 67888887644333322 22
Q ss_pred CCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCC
Q psy11518 96 HKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 96 ~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 130 (139)
.... ...++++|++. ++++-...+.|..+|+...
T Consensus 244 ~~~~-PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 244 HLFW-PNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp SCSC-EEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred CCCC-eeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 2222 78999997555 4455566788999998644
No 277
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.78 E-value=0.051 Score=35.64 Aligned_cols=111 Identities=6% Similarity=0.002 Sum_probs=73.1
Q ss_pred EEEec---CCcEEEEeCCCCeEEEEEccCCceeeE-EEe----cC--CCeEEEEE---CCCCCEEEEec-----------
Q psy11518 18 RSVAA---TSKLAASSGADETVVLYDMVKRKQSGA-LMQ----HE--GTITCLKF---TPEGSHLISCS----------- 73 (139)
Q Consensus 18 ~~~~~---~~~~l~~~~~~~~v~i~~~~~~~~~~~-~~~----~~--~~v~~~~~---~~~~~~l~~~~----------- 73 (139)
-+..| ++.++++.-..+.|..|++..+..... +.. .. ..+..+.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 34555 355666666899999999875543322 211 01 13578999 68877777543
Q ss_pred --CCCcEEEEEeC---CceEEEEEEeCC-----------CCcceeEEEEccCCcEEEEEcCC-CeEEEEEcC
Q psy11518 74 --DDGSIAIFRVG---SWQLEKLFKKAH-----------KGTAVNHISIHPSGKLALSVGKD-KTLRTWNLV 128 (139)
Q Consensus 74 --~d~~i~~~d~~---~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~~d-~~i~i~d~~ 128 (139)
.+..+..+|+. +++......... .......++..++|+..++++.. +.|..++..
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 25679999998 777666553221 11237899999999999988777 666666554
No 278
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.71 E-value=0.014 Score=41.59 Aligned_cols=96 Identities=13% Similarity=0.045 Sum_probs=58.2
Q ss_pred CCcEEEEeCCCC-----------eEEEEEccCCceeeEE--EecCCC-eEEEEECCCCCEEEEecCC-----------Cc
Q psy11518 23 TSKLAASSGADE-----------TVVLYDMVKRKQSGAL--MQHEGT-ITCLKFTPEGSHLISCSDD-----------GS 77 (139)
Q Consensus 23 ~~~~l~~~~~~~-----------~v~i~~~~~~~~~~~~--~~~~~~-v~~~~~~~~~~~l~~~~~d-----------~~ 77 (139)
++++++.|+.++ .+.+||+.+..-.... ...... -.+....|+++.++.|+.+ ..
T Consensus 410 ~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~ 489 (656)
T 1k3i_A 410 KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFT 489 (656)
T ss_dssp TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCC
T ss_pred CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccc
Confidence 788888888542 6778887765432221 111222 2344567899999988754 45
Q ss_pred EEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcC
Q psy11518 78 IAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK 118 (139)
Q Consensus 78 i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 118 (139)
+.+||..+.+....-.............+.|+++.++.|+.
T Consensus 490 v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 490 PEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred eEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 89999887664432211111111234556789999999985
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.67 E-value=0.06 Score=34.94 Aligned_cols=110 Identities=9% Similarity=-0.005 Sum_probs=66.6
Q ss_pred EEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec--CCCcEEEEEeCCceEEEEEEe
Q psy11518 18 RSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS--DDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 18 ~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~ 94 (139)
.++.+ .+.+..+-...+.|.+++++.................++++|.+..|.... ..+.|...+.......... .
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~-~ 162 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII-N 162 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE-C
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE-E
Confidence 34444 455556666778888888765433222323334568899998655554443 3567888877543322222 2
Q ss_pred CCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCC
Q psy11518 95 AHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~ 129 (139)
..-. ....+++++++. ++++-+..+.|..+|+..
T Consensus 163 ~~l~-~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 163 SEIY-WPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp SSCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCC-CccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 2222 278999998655 445556678899999864
No 280
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.66 E-value=0.06 Score=34.77 Aligned_cols=111 Identities=11% Similarity=-0.018 Sum_probs=68.0
Q ss_pred EEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCC-CcEEEEEeCCceEEEEEEe
Q psy11518 18 RSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDD-GSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 18 ~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d-~~i~~~d~~~~~~~~~~~~ 94 (139)
.++.+ .+.+.++-...+.|.+.++..................++++|.+..+. +.... +.|...+.... ....+..
T Consensus 82 lavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~ 160 (316)
T 1ijq_A 82 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVT 160 (316)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEEC
T ss_pred EEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEE
Confidence 34444 455556667788899999765433333333335668999998655544 43333 67888887543 3333312
Q ss_pred CCCCcceeEEEEccCCcEE-EEEcCCCeEEEEEcCCC
Q psy11518 95 AHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~ 130 (139)
..-. ....+++++++..| ++-...+.|..+|+...
T Consensus 161 ~~~~-~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 161 ENIQ-WPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp SSCS-CEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCC-CceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 2222 37899999876555 45556788999998643
No 281
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.63 E-value=0.01 Score=42.75 Aligned_cols=106 Identities=11% Similarity=0.035 Sum_probs=61.8
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec-CC-CcEEEEEeCCceEEEEEEeCCCCcc
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS-DD-GSIAIFRVGSWQLEKLFKKAHKGTA 100 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~~~d~~~~~~~~~~~~~~~~~~ 100 (139)
.+.++++-...+.|.++++........+.........++++|.+..|+... .. +.|..+++..... ..+... ....
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~-~l~~ 541 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTE-NIQW 541 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCS-SCSS
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeC-CCCC
Confidence 345555556678898888765433322222223456788888655444333 33 6787777653322 222111 1222
Q ss_pred eeEEEEccCCc-EEEEEcCCCeEEEEEcCCC
Q psy11518 101 VNHISIHPSGK-LALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 101 v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 130 (139)
...|+|+|++. ++++-...+.|..+++...
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 67899998655 5555567788999998643
No 282
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.58 E-value=0.081 Score=35.25 Aligned_cols=115 Identities=10% Similarity=-0.012 Sum_probs=69.0
Q ss_pred EEec-CCcEEEEeCCC-CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEE-EEecCCCcEEEEEeCCceEEEEEEeC
Q psy11518 19 SVAA-TSKLAASSGAD-ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGSWQLEKLFKKA 95 (139)
Q Consensus 19 ~~~~-~~~~l~~~~~~-~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~~~~~~~~~~~ 95 (139)
.+.+ .+.++.+-... +.|..+++............-.....++++|++..| .+-...+.|..+|.........+ ..
T Consensus 208 avdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~-~~ 286 (386)
T 3v65_B 208 ALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVI-SQ 286 (386)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEE-CS
T ss_pred EEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEE-EC
Confidence 3444 34444444444 678777765433222222223346899999865555 45556778999997654333333 22
Q ss_pred CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 96 HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.... +..+++ ..+..+++....+.|..+|..+++.+..+
T Consensus 287 ~~~~-P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 287 GLPH-PFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEII 325 (386)
T ss_dssp SCSS-EEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCC-ceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEE
Confidence 2233 678888 45667777777889999997777655544
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.50 E-value=0.15 Score=37.44 Aligned_cols=113 Identities=12% Similarity=0.034 Sum_probs=70.0
Q ss_pred EEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec-CC-CcEEEEEeCCceEEEEEEe
Q psy11518 18 RSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS-DD-GSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 18 ~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~~i~~~d~~~~~~~~~~~~ 94 (139)
+++.| .++++++-...+.|.+.++........+...-.....|+++|....|.... .. +.|...++........+ .
T Consensus 476 LAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv-~ 554 (791)
T 3m0c_C 476 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-T 554 (791)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEE-C
T ss_pred eeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEE-e
Confidence 44555 345666667788899999865443333333445578999998755554433 33 67888887654443333 2
Q ss_pred CCCCcceeEEEEccCCcEE-EEEcCCCeEEEEEcCCCce
Q psy11518 95 AHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~ 132 (139)
..... +..|++++.+..| ++-...+.|..+++.....
T Consensus 555 ~~l~~-P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 555 ENIQW-PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR 592 (791)
T ss_dssp SSCSC-EEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCCC-ceEEEEecCCCeEEEEeCCCCcEEEEecCCCce
Confidence 22223 7899999765554 4445667899998865433
No 284
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.33 E-value=0.1 Score=33.68 Aligned_cols=116 Identities=9% Similarity=-0.009 Sum_probs=68.7
Q ss_pred EEec-CCcEEEEeCCC-CeEEEEEccCCceeeEE-EecCCCeEEEEECCCCCEEE-EecCCCcEEEEEeCCceEEEEEEe
Q psy11518 19 SVAA-TSKLAASSGAD-ETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 19 ~~~~-~~~~l~~~~~~-~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~ 94 (139)
.+.+ .+.++.+.... +.|...++... ....+ ...-.....+++++++..|. +-...+.|..+|............
T Consensus 126 avdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~ 204 (316)
T 1ijq_A 126 VVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILED 204 (316)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEEC
T ss_pred EeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeec
Confidence 3444 34444444333 67877776433 33332 22234568999998766554 555667899999875333222221
Q ss_pred CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 95 AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
......+..+++. .+..+++....+.|..+|..+++.+..+
T Consensus 205 ~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 205 EKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp TTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred CCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 1111226778885 4667777777889999998877655443
No 285
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.30 E-value=0.12 Score=33.97 Aligned_cols=106 Identities=8% Similarity=-0.026 Sum_probs=65.2
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCC-CCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcce
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPE-GSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV 101 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v 101 (139)
++.++.+-...+.|..+++..................+++++. +++..+-...+.|.+.+.......... ..... .+
T Consensus 84 ~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~-~~~l~-~P 161 (349)
T 3v64_C 84 RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL-WQSLE-KP 161 (349)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CTTCS-CE
T ss_pred ccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE-eCCCC-Cc
Confidence 3445556567788888887665433333322234568888874 445556666778999998654333222 22223 37
Q ss_pred eEEEEccCCc-EEEEEcCC-CeEEEEEcCCC
Q psy11518 102 NHISIHPSGK-LALSVGKD-KTLRTWNLVKG 130 (139)
Q Consensus 102 ~~~~~~~~~~-~l~~~~~d-~~i~i~d~~~~ 130 (139)
..++++|.+. ++++-... +.|..+++...
T Consensus 162 ~~iavdp~~g~ly~td~~~~~~I~r~~~dG~ 192 (349)
T 3v64_C 162 RAIALHPMEGTIYWTDWGNTPRIEASSMDGS 192 (349)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred ceEEEecCcCeEEEeccCCCCEEEEEeCCCC
Confidence 8999998555 45555555 78888887643
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.26 E-value=0.16 Score=35.22 Aligned_cols=71 Identities=18% Similarity=0.198 Sum_probs=47.7
Q ss_pred eEEEEECC-CCCEEEEecCCCcEEEEEeC-------CceE-----------E-EEEEeCCCCcceeEEEEccCCcE-EEE
Q psy11518 57 ITCLKFTP-EGSHLISCSDDGSIAIFRVG-------SWQL-----------E-KLFKKAHKGTAVNHISIHPSGKL-ALS 115 (139)
Q Consensus 57 v~~~~~~~-~~~~l~~~~~d~~i~~~d~~-------~~~~-----------~-~~~~~~~~~~~v~~~~~~~~~~~-l~~ 115 (139)
...++.+| ++.++++-..++.|..+|+. ++.. . ..+...... ....++|+|+++. +++
T Consensus 249 p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~-~p~~ia~~p~G~~lYva 327 (496)
T 3kya_A 249 CNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPS-WEFQIFIHPTGKYAYFG 327 (496)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSS-CCEEEEECTTSSEEEEE
T ss_pred ceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCC-CceEEEEcCCCCEEEEE
Confidence 35778899 55666677778889999987 4443 1 222222222 2688999999995 555
Q ss_pred EcCCCeEEEEEcC
Q psy11518 116 VGKDKTLRTWNLV 128 (139)
Q Consensus 116 ~~~d~~i~i~d~~ 128 (139)
-....+|+.++..
T Consensus 328 D~~~h~I~kid~d 340 (496)
T 3kya_A 328 VINNHYFMRSDYD 340 (496)
T ss_dssp ETTTTEEEEEEEE
T ss_pred eCCCCEEEEEecC
Confidence 5677889986653
No 287
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.22 E-value=0.15 Score=34.57 Aligned_cols=111 Identities=13% Similarity=0.097 Sum_probs=69.3
Q ss_pred EEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEe--cCCCeEEEEECCCCCEE-EEecCCCcEEEEEeCC--ceE---E
Q psy11518 19 SVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQ--HEGTITCLKFTPEGSHL-ISCSDDGSIAIFRVGS--WQL---E 89 (139)
Q Consensus 19 ~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l-~~~~~d~~i~~~d~~~--~~~---~ 89 (139)
++.+ ++.+.++-..++.|..++..++.....+.. ....-..++|+|+++.| ++-...+.|..++... +.. .
T Consensus 234 avd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~ 313 (433)
T 4hw6_A 234 AVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPY 313 (433)
T ss_dssp EECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCE
T ss_pred EEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEE
Confidence 3455 566666777788999999887765223221 11223469999999855 4555677899988652 221 1
Q ss_pred EEEEe-CC-----------CCcceeEEEE---------ccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 90 KLFKK-AH-----------KGTAVNHISI---------HPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 90 ~~~~~-~~-----------~~~~v~~~~~---------~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
..... .. .-..+..+++ .+++.++++-...++|+.++. ++
T Consensus 314 ~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G 374 (433)
T 4hw6_A 314 IVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG 374 (433)
T ss_dssp EEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS
T ss_pred EEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC
Confidence 11111 00 0112677999 778888888788889999985 44
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.15 E-value=0.025 Score=40.81 Aligned_cols=101 Identities=8% Similarity=-0.019 Sum_probs=57.4
Q ss_pred CeEEEEEccCCceeeEE-EecCCCeEEEEECCCCC-EEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCc
Q psy11518 34 ETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK 111 (139)
Q Consensus 34 ~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (139)
+.|..+++... ....+ ...-.....|+++|++. ++++-...+.|..+++........+...........+++..+ .
T Consensus 519 ~~I~~~~~dG~-~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~ 596 (699)
T 1n7d_A 519 AKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-K 596 (699)
T ss_dssp CCEEBCCSSSC-CCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-E
T ss_pred CeEEEEeCCCC-CeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-E
Confidence 55666555332 22222 11123346899998654 445556677899999865433333211111112455666543 5
Q ss_pred EEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 112 LALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 112 ~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
++++....+.|..+|..+++.+..+
T Consensus 597 lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 597 VFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp EEEECSTTTCEEEEETTTEEEEECC
T ss_pred EEEEeCCCCeEEEEEccCCCceEEe
Confidence 5666667789999998888766554
No 289
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.07 E-value=0.26 Score=35.90 Aligned_cols=114 Identities=7% Similarity=0.033 Sum_probs=71.2
Q ss_pred eeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE----ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE
Q psy11518 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM----QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL 88 (139)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 88 (139)
..|.++.. ++..|..|+.++-|..+|..+++...-.. .....|.++...+++++++... +| |..||..+++.
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~G-l~~~~~~~~~~ 483 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SA-LVRFNPEQRSF 483 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SC-EEEEETTTTEE
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-Cc-eeEEeCCCCeE
Confidence 35666665 56635566666668999987765332211 1245688999888888766554 44 88899877655
Q ss_pred EEEEEe----CCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 89 EKLFKK----AHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 89 ~~~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
...... ......|.++...+++.+.+... . -+..||..+++.
T Consensus 484 ~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 484 TTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI 529 (795)
T ss_dssp EECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE
T ss_pred EEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE
Confidence 433211 11123488898888887555443 4 477888766543
No 290
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.03 E-value=0.18 Score=33.76 Aligned_cols=112 Identities=12% Similarity=0.028 Sum_probs=70.8
Q ss_pred EEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec-C-CCcEEEEEeCCceEEEEEEe
Q psy11518 18 RSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS-D-DGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 18 ~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~-d~~i~~~d~~~~~~~~~~~~ 94 (139)
.++.+ .+.+..+-...+.|.+.+++.......+...-.....++++|.+..|.... . .+.|...++......... .
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~-~ 242 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV-T 242 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE-C
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE-E
Confidence 34555 566666667788899888865544444443344578999998655554333 3 467888887654333332 2
Q ss_pred CCCCcceeEEEEccCCcEEEE-EcCCCeEEEEEcCCCc
Q psy11518 95 AHKGTAVNHISIHPSGKLALS-VGKDKTLRTWNLVKGR 131 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l~~-~~~d~~i~i~d~~~~~ 131 (139)
..-.. +..+++++++..|+. -...+.|..+|+....
T Consensus 243 ~~l~~-P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 243 ENIQW-PNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 279 (400)
T ss_dssp SSCSC-EEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred CCCCc-eEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc
Confidence 22223 789999986665554 4567889999986543
No 291
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.77 E-value=0.19 Score=31.86 Aligned_cols=109 Identities=12% Similarity=0.131 Sum_probs=61.7
Q ss_pred cCCcEEEEeCCC-----CeEEEEEccCCceee--EEEecCCCeEEEEECCCCCEEEEecCC-----CcEEEEEeCCceEE
Q psy11518 22 ATSKLAASSGAD-----ETVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSDD-----GSIAIFRVGSWQLE 89 (139)
Q Consensus 22 ~~~~~l~~~~~~-----~~v~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~ 89 (139)
.++.+++.|+.+ ..+.+||+.+.+=.. .+.........+.+ +++.++.|+.+ ..+.+||+.+.+..
T Consensus 158 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 158 ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 377788887754 458888987653211 11111112233333 56677777654 45889999877654
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCC-----CeEEEEEcCCCceeE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAY 134 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~ 134 (139)
..-..+........+. -++++++.|+.+ ..+.+||+++.+...
T Consensus 236 ~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 283 (301)
T 2vpj_A 236 TVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDSWEV 283 (301)
T ss_dssp EECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTEEEE
T ss_pred ECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCeEEE
Confidence 4321121111112222 367788888765 468899998876543
No 292
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.61 E-value=0.29 Score=32.81 Aligned_cols=117 Identities=8% Similarity=-0.015 Sum_probs=67.9
Q ss_pred EEec-CCcEEEEeCC-CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEe-cCCCcEEEEEeCCceEEEEEEeC
Q psy11518 19 SVAA-TSKLAASSGA-DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGSWQLEKLFKKA 95 (139)
Q Consensus 19 ~~~~-~~~~l~~~~~-~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~~~~~~~~~~~ 95 (139)
.+.+ .+.++.+-.. .+.|...++............-.....+++++++..|..+ ...+.|..+|+............
T Consensus 208 avdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~ 287 (400)
T 3p5b_L 208 VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE 287 (400)
T ss_dssp EEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECS
T ss_pred EEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCC
Confidence 3444 3333343322 3677777765433322223333456899999876666544 55678999998654433333221
Q ss_pred CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 96 HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
........++.. .+.++++....+.|..+|..+++.+..+
T Consensus 288 ~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 288 KRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp STTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred CCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 111225677773 4566677777888999998777665544
No 293
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.60 E-value=0.16 Score=35.94 Aligned_cols=73 Identities=12% Similarity=0.200 Sum_probs=52.1
Q ss_pred CeEEEEECCCCCEEEEecC-CCcEEEEEeCCce------E-----EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEE
Q psy11518 56 TITCLKFTPEGSHLISCSD-DGSIAIFRVGSWQ------L-----EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLR 123 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~-d~~i~~~d~~~~~------~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 123 (139)
....+..+|+|++++.++. +.++.++|..... . ...- ....+-.....+|.++|.-..+-.-|.+|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~a-e~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVG-EPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEE-CCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEe-eccCCCcccEEEECCCCceEeeeeecceEE
Confidence 3467889999999876655 8889999987421 1 0011 112233378899999997777778899999
Q ss_pred EEEcCC
Q psy11518 124 TWNLVK 129 (139)
Q Consensus 124 i~d~~~ 129 (139)
-|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999875
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.60 E-value=0.34 Score=33.64 Aligned_cols=108 Identities=19% Similarity=0.280 Sum_probs=63.9
Q ss_pred EEEec-C-CcEEEEeCCCCeEEEEEccCCceeeEEEec---CCCeEEEEE-------CCCCCEEEEecCCC-c------E
Q psy11518 18 RSVAA-T-SKLAASSGADETVVLYDMVKRKQSGALMQH---EGTITCLKF-------TPEGSHLISCSDDG-S------I 78 (139)
Q Consensus 18 ~~~~~-~-~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~l~~~~~d~-~------i 78 (139)
+++.+ + ++++++....+.|++.|++.+........- ......++| ++++..|+.+...+ . +
T Consensus 144 la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V 223 (496)
T 3kya_A 144 LAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSV 223 (496)
T ss_dssp EEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEE
T ss_pred EEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceE
Confidence 44454 2 344555455577888888776554433321 124789999 99998666555443 2 5
Q ss_pred EEEEeCC-ceEE-----EEEEeCCCCcceeEEEEcc-CCcEEEEEcCCCeEEEEEcC
Q psy11518 79 AIFRVGS-WQLE-----KLFKKAHKGTAVNHISIHP-SGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 79 ~~~d~~~-~~~~-----~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~ 128 (139)
.+++... +... ..+.. ... ...++.+| ++.++++-..++.|..+|+.
T Consensus 224 ~~i~r~~~G~~~~~~~~~~v~~--~~~-p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 224 YIIKRNADGTFDDRSDIQLIAA--YKQ-CNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEECCTTSCCSTTSCEEEEEE--ESC-CCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred EEEecCCCCceeecccceeecc--CCC-ceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 5665333 1221 12211 112 56788999 45556666788899999997
No 295
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.51 E-value=0.61 Score=35.92 Aligned_cols=98 Identities=12% Similarity=0.076 Sum_probs=59.3
Q ss_pred EEEEEccCCceeeEEEe-cCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccC-----
Q psy11518 36 VVLYDMVKRKQSGALMQ-HEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPS----- 109 (139)
Q Consensus 36 v~i~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~----- 109 (139)
|++.+......+..... ....|...+.+. .+++.+. .+.+.++.+..++..... ...-...|.|+++.|.
T Consensus 494 Irli~~~~~~~~~~w~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~~-~~~l~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 494 VRLVSQEPKALVSEWKEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQELRQIS-HTEMEHEVACLDITPLGDSNG 569 (1158)
T ss_dssp EEEEESSSCCEEEEECCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEEE-EEECSSCEEEEECCCCSSSTT
T ss_pred EEEEECCCCeEEEEEECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeeec-ccCCCCceEEEEeecCCCCcc
Confidence 44555443334433332 123455555543 4555554 567888888766543322 2222334999999863
Q ss_pred -CcEEEEEcC-CCeEEEEEcCCCceeEEEe
Q psy11518 110 -GKLALSVGK-DKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 110 -~~~l~~~~~-d~~i~i~d~~~~~~~~~~~ 137 (139)
++++++|.. |+.++|+++.+.+.+....
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~ 599 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFELLHKEM 599 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred cccEEEEEECCCCEEEEEECCCCCeEEEEE
Confidence 368899986 9999999998876665443
No 296
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.40 E-value=0.67 Score=35.70 Aligned_cols=112 Identities=17% Similarity=0.150 Sum_probs=67.6
Q ss_pred ceeeEEEEec-CCcEEEEeCCCCeEEEEEccCCceee-EEEecCCCeEEEEECCCCCEEEEecCCCcEEEEE--eCCceE
Q psy11518 13 HTASVRSVAA-TSKLAASSGADETVVLYDMVKRKQSG-ALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFR--VGSWQL 88 (139)
Q Consensus 13 ~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~ 88 (139)
..+++.+++. +|.++++. +..|++|++...+.+. ....+. .+..+.....+++++.|+.-..+.++. ...++.
T Consensus 884 v~g~v~al~~~~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L 960 (1158)
T 3ei3_A 884 VKGAVYSMVEFNGKLLASI--NSTVRLYEWTTEKELRTECNHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNF 960 (1158)
T ss_dssp ESSCEEEEEEETTEEEEEE--TTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEE
T ss_pred cCCcCEEEeeeCCEEEEEc--CCEEEEEECCCCceEEEEeeccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeE
Confidence 3567888875 77655544 3789999997665443 111121 222222223567888888776676654 444444
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
.... .......++++.+-.+ ..++.+..+|.+.++....
T Consensus 961 ~~~a-~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 961 EEIA-RDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEE-ECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECT
T ss_pred EEEE-eecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCC
Confidence 4444 3333333788887644 4677788899999887654
No 297
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.37 E-value=0.53 Score=34.34 Aligned_cols=113 Identities=16% Similarity=0.156 Sum_probs=69.5
Q ss_pred eEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE--------ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM--------QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
.|.++.. ++. |-.|+.++-|..|+..+++...-.. .....|.++...++++.+..|..++-|..+|..+
T Consensus 358 ~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~ 436 (795)
T 4a2l_A 358 VVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNS 436 (795)
T ss_dssp SEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTT
T ss_pred eeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCC
Confidence 4667765 444 4446666668889887664332211 1135688888888888344555555699999887
Q ss_pred ceEEEEEEeC---CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 86 WQLEKLFKKA---HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 86 ~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
++..... .. .....|.++...+++.+.+.. .+ -+..||..+++.
T Consensus 437 ~~~~~~~-~~~~~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~ 483 (795)
T 4a2l_A 437 GQVENFN-QRNSQLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSF 483 (795)
T ss_dssp CCEEEEC-TTTSCCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEE
T ss_pred CcEEEee-cCCCCcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeE
Confidence 7644332 11 112348889888888755544 34 488888876543
No 298
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=95.03 E-value=0.68 Score=33.70 Aligned_cols=112 Identities=16% Similarity=0.159 Sum_probs=67.9
Q ss_pred eeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEEec-----CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALMQH-----EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
..|.++.. ++. +..|+. +-|..+|..+++........ ...|.++...+++++.+.....| |..+|..+.+
T Consensus 450 ~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~ 526 (781)
T 3v9f_A 450 LDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQL 526 (781)
T ss_dssp CCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCE
T ss_pred CeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCe
Confidence 45666665 344 444444 45888898776543322211 35688999998888776554455 7778876654
Q ss_pred EEEEEEeCC--CCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 88 LEKLFKKAH--KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 88 ~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
... +.... ....|.++...++|.+.+.. .+|.+..||..+++
T Consensus 527 ~~~-~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 527 VRK-FNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPSARNFD 570 (781)
T ss_dssp EEE-ECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESCTTTCC
T ss_pred EEE-ccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEECCCCCc
Confidence 433 31111 12338888888888755544 46655788877654
No 299
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.93 E-value=0.73 Score=33.54 Aligned_cols=114 Identities=12% Similarity=0.057 Sum_probs=66.8
Q ss_pred eeEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEE---EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEE
Q psy11518 15 ASVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGAL---MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLE 89 (139)
Q Consensus 15 ~~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~ 89 (139)
..|.++.. ++. |-.|+.++-|..|+..++....-. ......|.++...+++.+.+ |..++-|..+|..+++..
T Consensus 363 ~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 363 KVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp SCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE
T ss_pred cceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE
Confidence 34667665 344 445554455888887654322111 12335688888888887666 444445888887766543
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
...........|.++...+++.+.+ |+. +-|..||..+++.
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKV 481 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSC
T ss_pred EeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeE
Confidence 3221011223488888888777444 444 4588888877554
No 300
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.79 E-value=0.43 Score=30.25 Aligned_cols=108 Identities=13% Similarity=0.113 Sum_probs=60.4
Q ss_pred cCCcEEEEeCCC-------CeEEEEEccCCce--eeEEEecCCCeEEEEECCCCCEEEEecCC-----CcEEEEEeCCce
Q psy11518 22 ATSKLAASSGAD-------ETVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSDD-----GSIAIFRVGSWQ 87 (139)
Q Consensus 22 ~~~~~l~~~~~~-------~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~ 87 (139)
.++.+++.|+.+ ..+.+||+.+.+= +..+.........+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 154 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 154 VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 377777777642 3578888876532 1111111122233333 56677777654 368899988776
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCC-----CeEEEEEcCCCcee
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSA 133 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~ 133 (139)
....-....... -..++ ..++++++.|+.+ ..+.+||+.+.+..
T Consensus 232 W~~~~~~~~~r~-~~~~~-~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 232 WRQVADMNMCRR-NAGVC-AVNGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp EEEECCCSSCCB-SCEEE-EETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred EeeCCCCCCccc-cCeEE-EECCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 544321121111 11122 2367888888765 34899999887654
No 301
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=94.78 E-value=0.48 Score=30.72 Aligned_cols=101 Identities=9% Similarity=-0.079 Sum_probs=61.9
Q ss_pred CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCc
Q psy11518 33 DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGK 111 (139)
Q Consensus 33 ~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 111 (139)
.+.|...++............-.....+++++++..|. +-...+.|..+|.......... ...... +..+++. .+.
T Consensus 144 ~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~-~~~~~~-P~glav~-~~~ 220 (318)
T 3sov_A 144 VPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVV-KGSLPH-PFALTLF-EDI 220 (318)
T ss_dssp SCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE-CSCCSC-EEEEEEE-TTE
T ss_pred CCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEe-cCCCCC-ceEEEEe-CCE
Confidence 56777777653322222222223458999998655554 5556778999998643332222 222233 6778875 446
Q ss_pred EEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 112 LALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 112 ~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
.+++-...+.|..+|..+++....+
T Consensus 221 lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 221 LYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp EEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEEecCCCeEEEEECCCCCceEEE
Confidence 6667777889999999887765443
No 302
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.65 E-value=0.48 Score=30.11 Aligned_cols=109 Identities=8% Similarity=0.111 Sum_probs=60.8
Q ss_pred cCCcEEEEeCC---------CCeEEEEEccCCce--eeEEEecCCCeEEEEECCCCCEEEEecCC-----CcEEEEEeCC
Q psy11518 22 ATSKLAASSGA---------DETVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSDD-----GSIAIFRVGS 85 (139)
Q Consensus 22 ~~~~~l~~~~~---------~~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~ 85 (139)
.++.+++.|+. -..+.+||+.+.+= +..+.........+.+ +++.++.|+.+ ..+.+||+.+
T Consensus 148 ~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 148 ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTT
T ss_pred ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCC
Confidence 47777777763 34588899877631 1111111122223333 56667777653 3588899887
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC-----CeEEEEEcCCCceeE
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAY 134 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~ 134 (139)
.+....-..+........+.+ ++++++.|+.+ ..+.+||+.+.+...
T Consensus 226 ~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~ 277 (306)
T 3ii7_A 226 NEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKWVA 277 (306)
T ss_dssp TEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEEEE
T ss_pred CcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEe
Confidence 654433211211111222222 67888888853 568999998876543
No 303
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=94.64 E-value=0.49 Score=30.24 Aligned_cols=109 Identities=10% Similarity=0.117 Sum_probs=60.2
Q ss_pred cCCcEEEEeCC------CCeEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecCCC-----cEEEEEeCCceE
Q psy11518 22 ATSKLAASSGA------DETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDG-----SIAIFRVGSWQL 88 (139)
Q Consensus 22 ~~~~~l~~~~~------~~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~~d~~~~~~ 88 (139)
.++++++.|+. -..+.+||+.+.+ .+..+........++.+ +++.++.|+.++ .+..||..+.+.
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 47777788875 2468888887652 11111111122233333 566777776554 478889887755
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCC--------------CeEEEEEcCCCceeE
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKD--------------KTLRTWNLVKGRSAY 134 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------------~~i~i~d~~~~~~~~ 134 (139)
...-..+........+. -++++++.|+.+ ..+.+||+++.+...
T Consensus 225 ~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 282 (315)
T 4asc_A 225 APFEAFPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEG 282 (315)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEE
T ss_pred EECCCCCCcccceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhh
Confidence 44322122211112222 267778877753 247889998876543
No 304
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.64 E-value=0.48 Score=30.05 Aligned_cols=109 Identities=11% Similarity=0.100 Sum_probs=59.4
Q ss_pred cCCcEEEEeCCCC-----eEEEEEccCCcee--eEEEecCCCeEEEEECCCCCEEEEecCC-------CcEEEEEeCCce
Q psy11518 22 ATSKLAASSGADE-----TVVLYDMVKRKQS--GALMQHEGTITCLKFTPEGSHLISCSDD-------GSIAIFRVGSWQ 87 (139)
Q Consensus 22 ~~~~~l~~~~~~~-----~v~i~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~~d~~~~~ 87 (139)
.++.+++.|+.++ .+.+||+.+.+=. ..+........++.+ +++.++.|+.+ ..+..||+.+..
T Consensus 107 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 107 LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 4777777777543 5778887665321 111111122223333 55666666542 348889988776
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCC-----CeEEEEEcCCCceeE
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAY 134 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~ 134 (139)
....-..+........+. -++++++.|+.+ ..+.+||+.+.+...
T Consensus 185 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 234 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ 234 (302)
T ss_dssp EEEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEEE
T ss_pred EEECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEee
Confidence 544321122111112222 267788888754 468999998876543
No 305
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.58 E-value=0.5 Score=30.01 Aligned_cols=108 Identities=8% Similarity=0.055 Sum_probs=60.9
Q ss_pred cCCcEEEEeCCC----CeEEEEEccCCceee--EEEecCCCeEEEEECCCCCEEEEecCC------CcEEEEEeCCceEE
Q psy11518 22 ATSKLAASSGAD----ETVVLYDMVKRKQSG--ALMQHEGTITCLKFTPEGSHLISCSDD------GSIAIFRVGSWQLE 89 (139)
Q Consensus 22 ~~~~~l~~~~~~----~~v~i~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~~~d~~~~~~~ 89 (139)
.++.+++.|+.+ ..+.+||+.+.+-.. .+.........+.+ +++.++.|+.+ ..+.+||..+....
T Consensus 54 ~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 54 WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 477788888754 678889987763221 11111122233333 56677777654 45889998877654
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcC---------CCeEEEEEcCCCcee
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGK---------DKTLRTWNLVKGRSA 133 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~~i~i~d~~~~~~~ 133 (139)
..-..+.... -.+++ .-++++++.|+. -..+.+||+.+.+..
T Consensus 132 ~~~~~p~~r~-~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~ 182 (306)
T 3ii7_A 132 TKPSMLTQRC-SHGMV-EANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT 182 (306)
T ss_dssp EECCCSSCCB-SCEEE-EETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE
T ss_pred eCCCCcCCcc-eeEEE-EECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE
Confidence 4321121111 11122 236777777763 345889999887544
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.56 E-value=0.85 Score=32.57 Aligned_cols=111 Identities=9% Similarity=-0.033 Sum_probs=65.7
Q ss_pred EEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecC--CCcEEEEEeCCceEEEEEEe
Q psy11518 18 RSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSD--DGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 18 ~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~ 94 (139)
.++.+ .+++..+-...+.|.+.++............-.....++++|.+..|.-... .+.|...++......... .
T Consensus 89 lAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~-~ 167 (619)
T 3s94_A 89 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII-N 167 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-C
T ss_pred EEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEE-e
Confidence 44555 4556666677889999998654332223233344578899886554443332 356666665533322222 2
Q ss_pred CCCCcceeEEEEccCCc-EEEEEcCCCeEEEEEcCCC
Q psy11518 95 AHKGTAVNHISIHPSGK-LALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~ 130 (139)
.. ...+..+++++++. ++++-...+.|..+|+...
T Consensus 168 ~~-~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 168 SE-IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp SS-CSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred CC-CCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 22 22378999998655 4455556778998888654
No 307
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.45 E-value=0.55 Score=29.95 Aligned_cols=108 Identities=7% Similarity=0.060 Sum_probs=59.5
Q ss_pred cCCcEEEEeCCC-----CeEEEEEccCCce--eeEEEecCCCeEEEEECCCCCEEEEecCC-----CcEEEEEeCCceEE
Q psy11518 22 ATSKLAASSGAD-----ETVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSDD-----GSIAIFRVGSWQLE 89 (139)
Q Consensus 22 ~~~~~l~~~~~~-----~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~ 89 (139)
.++.+++.|+.+ ..+.+||+.+.+= +..+.........+.+ ++..++.|+.+ ..+..||+.+....
T Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 197 (308)
T 1zgk_A 120 IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWR 197 (308)
T ss_dssp ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEe
Confidence 377777777643 3577888876531 1111111222233333 56666777654 35888998876554
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCC-----CeEEEEEcCCCcee
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSA 133 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~ 133 (139)
..-..+........+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 198 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp ECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred eCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 33211111111122222 67788888754 56899999887544
No 308
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=94.37 E-value=0.13 Score=38.61 Aligned_cols=38 Identities=11% Similarity=0.149 Sum_probs=33.5
Q ss_pred eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+.+++..++..++++-+.|+++++|++.+++.+....+
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 66777788888999999999999999999999887654
No 309
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=94.37 E-value=0.68 Score=35.53 Aligned_cols=38 Identities=11% Similarity=0.149 Sum_probs=32.7
Q ss_pred eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
+.+++..++..++++-+.|+++++||+.+++.+....+
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 45566677889999999999999999999999888664
No 310
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.32 E-value=1.1 Score=33.02 Aligned_cols=117 Identities=8% Similarity=-0.015 Sum_probs=67.1
Q ss_pred EEecC-CcEEEEeCCC-CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCcEEEEEeCCceEEEEEEeC
Q psy11518 19 SVAAT-SKLAASSGAD-ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFKKA 95 (139)
Q Consensus 19 ~~~~~-~~~l~~~~~~-~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~~~ 95 (139)
++.+. +.++.+-... +.|...++........+...-.....|++++....|. +-.....|...++............
T Consensus 520 aVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~ 599 (791)
T 3m0c_C 520 VVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDE 599 (791)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECT
T ss_pred EEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCC
Confidence 33443 4444443333 6777777754433333333334678999997655554 4455667999998654444333221
Q ss_pred CCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEE
Q psy11518 96 HKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 96 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 136 (139)
..-.....|++. .+.++++-...+.|...|..+++.+..+
T Consensus 600 ~~l~~P~glav~-~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 600 KRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp TTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred CccCCCCEEEEe-CCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 111125567764 3456666667788998888777665443
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.83 E-value=0.74 Score=29.11 Aligned_cols=109 Identities=14% Similarity=0.102 Sum_probs=61.1
Q ss_pred cCCcEEEEeCCC-----CeEEEEEccCCcee--eEEEecCCCeEEEEECCCCCEEEEecCC-----CcEEEEEeCCceEE
Q psy11518 22 ATSKLAASSGAD-----ETVVLYDMVKRKQS--GALMQHEGTITCLKFTPEGSHLISCSDD-----GSIAIFRVGSWQLE 89 (139)
Q Consensus 22 ~~~~~l~~~~~~-----~~v~i~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~ 89 (139)
.++.+++.|+.+ ..+.+||+.+.+=. ..+........++.+ +++.++.|+.+ ..+..||+.+....
T Consensus 111 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 188 (301)
T 2vpj_A 111 LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWT 188 (301)
T ss_dssp ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEE
Confidence 377777777643 36888888765322 111111122223333 56677777654 35889998877654
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCC-----CeEEEEEcCCCceeE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAY 134 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~ 134 (139)
..-..+........+. -++++++.|+.+ ..+.+||+.+.+...
T Consensus 189 ~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 236 (301)
T 2vpj_A 189 NVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTT 236 (301)
T ss_dssp EECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEE
T ss_pred eCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEE
Confidence 4321121111112222 267778888753 468999998876543
No 312
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.80 E-value=0.41 Score=31.53 Aligned_cols=69 Identities=10% Similarity=0.003 Sum_probs=45.9
Q ss_pred CEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEc--c-CCcEEEEE-cCCCeEEEEEcCCCceeEEE
Q psy11518 67 SHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIH--P-SGKLALSV-GKDKTLRTWNLVKGRSAYIT 136 (139)
Q Consensus 67 ~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~--~-~~~~l~~~-~~d~~i~i~d~~~~~~~~~~ 136 (139)
..++.++.||.|.-+|..+|+..+.+....... +....-. + ++..++.. +.||.|..+|..+|.....+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p-~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~ 83 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQP-LIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPL 83 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCC-SEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCC-cEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeee
Confidence 367788999999999999999999985441112 2221100 1 23334343 68999999999988665544
No 313
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.78 E-value=0.79 Score=29.29 Aligned_cols=108 Identities=12% Similarity=0.191 Sum_probs=58.9
Q ss_pred CCcEEEEeCCC--------CeEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecC-C-----CcEEEEEeCCc
Q psy11518 23 TSKLAASSGAD--------ETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSD-D-----GSIAIFRVGSW 86 (139)
Q Consensus 23 ~~~~l~~~~~~--------~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d-----~~i~~~d~~~~ 86 (139)
++.+++.|+.+ ..+.+||+.+.+ .+..+.........+.+ +++.++.|+. + ..+..||..+.
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSH--MDLVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEE--CCEEEEEeCCCCCCcccceEEEEeCCCC
Confidence 77777777732 358888887653 11111111222223332 5566677765 2 35889998876
Q ss_pred eEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCC-----eEEEEEcCCCceeE
Q psy11518 87 QLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDK-----TLRTWNLVKGRSAY 134 (139)
Q Consensus 87 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~ 134 (139)
+....-..+.... -.+++ .-++++++.|+.++ .+.+||+.+.+...
T Consensus 176 ~W~~~~~~p~~r~-~~~~~-~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 226 (315)
T 4asc_A 176 EWKELAPMQTARS-LFGAT-VHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAP 226 (315)
T ss_dssp EEEECCCCSSCCB-SCEEE-EETTEEEEEEEECSSSEEEEEEEEETTTTEEEE
T ss_pred eEEECCCCCCchh-ceEEE-EECCEEEEEeccCCCCccceEEEEECCCCeEEE
Confidence 5443321111111 11222 22678888887543 58899998875543
No 314
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.61 E-value=1.5 Score=31.81 Aligned_cols=108 Identities=13% Similarity=0.130 Sum_probs=61.5
Q ss_pred CCcEEEEeCCC------CeEEEEEccCCc--eeeEEEecCCCeEEEEECCCCCEEEEecCCC--cEEEEEeCCceEEEEE
Q psy11518 23 TSKLAASSGAD------ETVVLYDMVKRK--QSGALMQHEGTITCLKFTPEGSHLISCSDDG--SIAIFRVGSWQLEKLF 92 (139)
Q Consensus 23 ~~~~l~~~~~~------~~v~i~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~~d~~~~~~~~~~ 92 (139)
++.+++.|+.+ ..+.+||+.+.+ .+..+....... +++...++..++.|+.++ .+.+||..+......-
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 77777777743 357788887642 121111111222 223323777888887654 6899999887654332
Q ss_pred E---eCCCCcceeEEEEccC-CcEEEEEcC--C-----CeEEEEEcCCCc
Q psy11518 93 K---KAHKGTAVNHISIHPS-GKLALSVGK--D-----KTLRTWNLVKGR 131 (139)
Q Consensus 93 ~---~~~~~~~v~~~~~~~~-~~~l~~~~~--d-----~~i~i~d~~~~~ 131 (139)
. .+........+.+..+ +++++.||. + ..+.+||+.+.+
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 1 0111111233555555 677777775 2 458999998877
No 315
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.56 E-value=1 Score=29.87 Aligned_cols=94 Identities=10% Similarity=0.081 Sum_probs=56.9
Q ss_pred CCeEEEEEccCCce----eeEEEec-CCCeEEEEECCCCCEEEEecC---C------------CcEEEEEeCCceEEEEE
Q psy11518 33 DETVVLYDMVKRKQ----SGALMQH-EGTITCLKFTPEGSHLISCSD---D------------GSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 33 ~~~v~i~~~~~~~~----~~~~~~~-~~~v~~~~~~~~~~~l~~~~~---d------------~~i~~~d~~~~~~~~~~ 92 (139)
+..|.+|++..... +..+.+. -...+.+.+.++|+..++... | ..-.+|.+..++.....
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~ 217 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVA 217 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEE
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEee
Confidence 56788888765422 2223222 235688999999988777641 1 22344444444332222
Q ss_pred EeCCCCcceeEEEEccCCcEEEEE-cCCCeEEEEEcCC
Q psy11518 93 KKAHKGTAVNHISIHPSGKLALSV-GKDKTLRTWNLVK 129 (139)
Q Consensus 93 ~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~i~d~~~ 129 (139)
..-.. .+.++|+||++.++.+ +..+.|..|++..
T Consensus 218 --~~l~~-pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 218 --EGFDF-ANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp --EEESS-EEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred --cCCcc-cCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 11122 6889999999876655 5678999999864
No 316
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=93.55 E-value=0.74 Score=32.79 Aligned_cols=59 Identities=19% Similarity=0.214 Sum_probs=42.6
Q ss_pred eEEEEECCCCCEEEEecCC------------CcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEE
Q psy11518 57 ITCLKFTPEGSHLISCSDD------------GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSV 116 (139)
Q Consensus 57 v~~~~~~~~~~~l~~~~~d------------~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 116 (139)
.-.|.|+|.|++++.-..+ ..+.+.+..+++....+. ...+..++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~-~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEe-CCCCccCcCeeECCCCCEEEEE
Confidence 3568999999977765433 235566666777776663 4455669999999999988765
No 317
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.42 E-value=1.1 Score=29.76 Aligned_cols=107 Identities=14% Similarity=0.211 Sum_probs=71.8
Q ss_pred ecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc-eEEEEEEeCC--C
Q psy11518 21 AATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW-QLEKLFKKAH--K 97 (139)
Q Consensus 21 ~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-~~~~~~~~~~--~ 97 (139)
.|..+.+|.-. ...+.++|+++.+.+..+.- ...|.-..|-.+.. |+-.. +..|.-|++... .+...+.... .
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~-L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~ 150 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLA 150 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSE-EEEEE-SSEEEEEESSTTCCCEEEEECCGGGT
T ss_pred CCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCCe-EEEEc-CCcEEEEcccCCCCCceeeecchhcc
Confidence 34555566554 68899999999988888764 45788899975544 33332 236999998753 3444543221 1
Q ss_pred CcceeEEEEccCCcEEEEEcC-------CCeEEEEEcCCCc
Q psy11518 98 GTAVNHISIHPSGKLALSVGK-------DKTLRTWNLVKGR 131 (139)
Q Consensus 98 ~~~v~~~~~~~~~~~l~~~~~-------d~~i~i~d~~~~~ 131 (139)
..+|..-..+++.+|++..|- .|.+.+|+.+.+.
T Consensus 151 ~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~ 191 (365)
T 2xzh_A 151 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV 191 (365)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE
T ss_pred cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc
Confidence 344778888999998876652 4778888887654
No 318
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.41 E-value=0.92 Score=28.90 Aligned_cols=109 Identities=13% Similarity=0.105 Sum_probs=61.3
Q ss_pred cCCcEEEEeCCC-----CeEEEEEccCCce--eeEEEecCCCeEEEEECCCCCEEEEecCC-----CcEEEEEeCCceEE
Q psy11518 22 ATSKLAASSGAD-----ETVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSDD-----GSIAIFRVGSWQLE 89 (139)
Q Consensus 22 ~~~~~l~~~~~~-----~~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~~~ 89 (139)
.++.+++.|+.+ ..+.+||+.+.+= +..+.........+.+ +++.++.|+.+ ..+.+||+.+.+..
T Consensus 167 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 167 LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred ECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 377777877754 4588888876521 1111111222233333 56677777654 45889998877654
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCC-----CeEEEEEcCCCceeE
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSAY 134 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~ 134 (139)
..-..+.... -.+++. -++++++.|+.+ ..+.+||+++.+...
T Consensus 245 ~~~~~p~~r~-~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~ 292 (308)
T 1zgk_A 245 FVAPMKHRRS-ALGITV-HQGRIYVLGGYDGHTFLDSVECYDPDTDTWSE 292 (308)
T ss_dssp ECCCCSSCCB-SCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEE
T ss_pred ECCCCCCCcc-ceEEEE-ECCEEEEEcCcCCCcccceEEEEcCCCCEEee
Confidence 3321121111 112222 267788888743 458899998876544
No 319
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.30 E-value=1.6 Score=31.29 Aligned_cols=111 Identities=9% Similarity=0.062 Sum_probs=67.3
Q ss_pred EEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec--CCCcEEEEEeCCceEEEEEEe
Q psy11518 18 RSVAA-TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS--DDGSIAIFRVGSWQLEKLFKK 94 (139)
Q Consensus 18 ~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~~d~~~~~~~~~~~~ 94 (139)
.++.| .+++..+-...+.|.+.++........+...-.....++++|....|.-.. ..+.|...++.........
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-- 162 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-- 162 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE--
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE--
Confidence 34455 455666666778899888765433222223334568999998544444333 2566777777654433333
Q ss_pred CCCCcceeEEEEccCCcEE-EEEcCCCeEEEEEcCCCc
Q psy11518 95 AHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 95 ~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~~ 131 (139)
..-. .+..+++++++..| ++-...+.|..+|+....
T Consensus 163 ~~~~-~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~ 199 (628)
T 4a0p_A 163 PNVG-RANGLTIDYAKRRLYWTDLDTNLIESSNMLGLN 199 (628)
T ss_dssp CSCS-SEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCC-CcceEEEccccCEEEEEECCCCEEEEEcCCCCc
Confidence 2222 37899999965544 455567889999986543
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.27 E-value=1.3 Score=30.30 Aligned_cols=101 Identities=13% Similarity=0.175 Sum_probs=55.3
Q ss_pred EEEecCCcEEEEeCCCCeEEEEEccCCceee--EEEe------cCCCeEEEEECCC---CCEE-EEecC-----------
Q psy11518 18 RSVAATSKLAASSGADETVVLYDMVKRKQSG--ALMQ------HEGTITCLKFTPE---GSHL-ISCSD----------- 74 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~--~~~~------~~~~v~~~~~~~~---~~~l-~~~~~----------- 74 (139)
+++.++|.++++-...+.|.+++..+++... .+.. .......++|+|+ ...| ++-+.
T Consensus 32 ~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~ 111 (454)
T 1cru_A 32 LLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELP 111 (454)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSC
T ss_pred EEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCccccc
Confidence 3444588888877665678888765554321 1211 2345678999995 4444 33322
Q ss_pred -CCcEEEEEeCCc--eE---EEEEE--eCCCCcceeEEEEccCCcEEEEEcC
Q psy11518 75 -DGSIAIFRVGSW--QL---EKLFK--KAHKGTAVNHISIHPSGKLALSVGK 118 (139)
Q Consensus 75 -d~~i~~~d~~~~--~~---~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~ 118 (139)
...|.-++.... .. ...+. .....+....++|.|+|.++++.++
T Consensus 112 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 112 NQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 124555554321 11 11111 1111222688999999998777654
No 321
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.18 E-value=1.2 Score=29.40 Aligned_cols=96 Identities=16% Similarity=0.140 Sum_probs=53.3
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCc-eeeEEE---ecCCCeEEEEECCC---CCEE-EEecC---C----CcEEEEEe
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRK-QSGALM---QHEGTITCLKFTPE---GSHL-ISCSD---D----GSIAIFRV 83 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~-~~~~~~---~~~~~v~~~~~~~~---~~~l-~~~~~---d----~~i~~~d~ 83 (139)
.+.+++.++++ ..++.|.+++ .+++ .+..+. ........++++|+ +..| ++-.. + ..|..|+.
T Consensus 35 a~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~ 112 (354)
T 3a9g_A 35 APLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRL 112 (354)
T ss_dssp EEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEE
T ss_pred EEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEE
Confidence 34447875555 4458999887 3454 121111 12345789999997 4444 33332 2 46777776
Q ss_pred CCc--e---E--E-EEEEeCCCCcceeEEEEccCCcEEEEEc
Q psy11518 84 GSW--Q---L--E-KLFKKAHKGTAVNHISIHPSGKLALSVG 117 (139)
Q Consensus 84 ~~~--~---~--~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 117 (139)
... . . + ..+. .........++|.|+|.++++.+
T Consensus 113 ~~~~~~~~~~~~l~~~~~-~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 113 DGSTFKLKEVKTLIDGIP-GAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp CSSSCCEEEEEEEEEEEE-CCSSCCCCCEEECTTSCEEEECC
T ss_pred CCCCcCcCccEEEEEcCC-CCCCcCCceEEECCCCcEEEEEC
Confidence 543 1 1 1 1122 11111256799999998777654
No 322
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.16 E-value=1.8 Score=31.41 Aligned_cols=111 Identities=15% Similarity=0.204 Sum_probs=61.3
Q ss_pred CCcEEEEeCCCC--eEEEEEccCCcee--eE---EEecCCCeEEEEECCC-CCEEEEecC--C-----CcEEEEEeCCce
Q psy11518 23 TSKLAASSGADE--TVVLYDMVKRKQS--GA---LMQHEGTITCLKFTPE-GSHLISCSD--D-----GSIAIFRVGSWQ 87 (139)
Q Consensus 23 ~~~~l~~~~~~~--~v~i~~~~~~~~~--~~---~~~~~~~v~~~~~~~~-~~~l~~~~~--d-----~~i~~~d~~~~~ 87 (139)
++.+++.|+.++ .+.+||+.+.+=. .. .........++.+..+ ++.++.|+. + ..+..||+.+..
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 788888887654 6889998765311 10 1111112233455544 566677765 2 348899998776
Q ss_pred ------EEEEEEeCCCCcceeEEEEccCCcEEEEEcC--------CCeEEEEEcCCCcee
Q psy11518 88 ------LEKLFKKAHKGTAVNHISIHPSGKLALSVGK--------DKTLRTWNLVKGRSA 133 (139)
Q Consensus 88 ------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------d~~i~i~d~~~~~~~ 133 (139)
.............-..++...++++++.||. ...+.+||+.+.+..
T Consensus 580 w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 580 ATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp SSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred cccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 2222211111110122333334788888874 345999999887654
No 323
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.01 E-value=1.8 Score=31.05 Aligned_cols=106 Identities=8% Similarity=-0.002 Sum_probs=63.4
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCC-EEEEecCCCcEEEEEeCCceEEEEEEeCCCCcce
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAV 101 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v 101 (139)
++.++.+-..++.|..+++........+.........+++++.+. +..+-...+.|.+.++......... ...-. .+
T Consensus 48 ~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~-~~~l~-~P 125 (628)
T 4a0p_A 48 DNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLV-WKDLD-SP 125 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEE-CSSCC-CE
T ss_pred CCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEE-eCCCC-Cc
Confidence 455556666778888888765443333332223457888887544 4456566778999998654332222 22223 37
Q ss_pred eEEEEccC-CcEEEEE-cCCCeEEEEEcCCC
Q psy11518 102 NHISIHPS-GKLALSV-GKDKTLRTWNLVKG 130 (139)
Q Consensus 102 ~~~~~~~~-~~~l~~~-~~d~~i~i~d~~~~ 130 (139)
..++++|. |.++++- +..+.|...++...
T Consensus 126 ~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 126 RALALDPAEGFMYWTEWGGKPKIDRAAMDGS 156 (628)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred ccEEEccCCCeEEEeCCCCCCEEEEEeCCCC
Confidence 89999985 4444444 23567777777544
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.97 E-value=0.57 Score=29.13 Aligned_cols=68 Identities=13% Similarity=0.058 Sum_probs=43.4
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEEeCCce------EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEc
Q psy11518 55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ------LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNL 127 (139)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~ 127 (139)
..+..++|+|++.+.+. .+|.+.-.+..+.. ....+....-.. -..+.|.|+|.+.++ .||.|.-++-
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 36779999999987766 67766655543311 122221211222 477899999998888 5588876665
No 325
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=92.58 E-value=1.8 Score=29.99 Aligned_cols=132 Identities=14% Similarity=0.165 Sum_probs=79.7
Q ss_pred EEEeecceeeEEEEec-CCcEEEEeCCCCeEEEEEccC-CceeeEEEecC----CCeEEEEECCCCCEEEEec-------
Q psy11518 7 TFVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVK-RKQSGALMQHE----GTITCLKFTPEGSHLISCS------- 73 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~------- 73 (139)
.++.+.....|.-+.| +.+.|+..+. ..|.-|++.. ..+.+.+..|. ..|..-..+++.++++..+
T Consensus 98 klks~~~~e~VvfWkWis~~~l~lVT~-taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~ 176 (494)
T 1bpo_A 98 KMKAHTMTDDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNR 176 (494)
T ss_dssp EEEEEECSSCCCEEEEEETTEEEEECS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTE
T ss_pred hhcceecCCCceEEEecCCCeEEEEcC-CeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCc
Confidence 3444445567888888 6666666553 6788899864 45667776553 3455555677777765222
Q ss_pred CCCcEEEEEeCCce------------------------------------EEEEEEeCCC--C-----------------
Q psy11518 74 DDGSIAIFRVGSWQ------------------------------------LEKLFKKAHK--G----------------- 98 (139)
Q Consensus 74 ~d~~i~~~d~~~~~------------------------------------~~~~~~~~~~--~----------------- 98 (139)
-.|.+.+|..+... .+..++..+. +
T Consensus 177 v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~ 256 (494)
T 1bpo_A 177 VVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 256 (494)
T ss_dssp EEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTS
T ss_pred ccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCccc
Confidence 12445555543211 1111111111 0
Q ss_pred --cceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEecC
Q psy11518 99 --TAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS 139 (139)
Q Consensus 99 --~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 139 (139)
.=..++..++....+...+.-|.+++||++++..++.-.++
T Consensus 257 ~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs 299 (494)
T 1bpo_A 257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS 299 (494)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred ccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeeccc
Confidence 00345666666677788888899999999999999876654
No 326
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.49 E-value=1.1 Score=27.96 Aligned_cols=98 Identities=9% Similarity=0.061 Sum_probs=55.3
Q ss_pred EEEecCCcEEEEeCCCCeEEEEEccCCcee-----eEEE---ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceE-
Q psy11518 18 RSVAATSKLAASSGADETVVLYDMVKRKQS-----GALM---QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQL- 88 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~-----~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~- 88 (139)
..+.+++.+.++ .++.+.-.+..+.... .+.- +... ..++.|.|++.+.++ .||.|.-++-.+...
T Consensus 46 laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~ 120 (236)
T 1tl2_A 46 LFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTD 120 (236)
T ss_dssp EEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTC
T ss_pred EEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCC
Confidence 344447776666 6677666665442110 1111 1111 367889999998877 568887666432110
Q ss_pred -----EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEE
Q psy11518 89 -----EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLR 123 (139)
Q Consensus 89 -----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 123 (139)
-..+....-. .+..+.+.|+|.+.++. |+.+.
T Consensus 121 ~Wl~~a~~vg~~gw~-~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 121 NWIARATEVGSGGWS-GFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp CHHHHSEEEECSSGG-GEEEEEECTTSCEEEEE--TTEEE
T ss_pred ceeccccEeccCCCC-ceEEEEECCCceEEEEe--CCcEE
Confidence 1122111112 37889999999988777 66643
No 327
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.32 E-value=1.6 Score=28.92 Aligned_cols=78 Identities=18% Similarity=0.356 Sum_probs=48.2
Q ss_pred CeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEe-cCCCcEEEEEeCC-ceEE--EEEEeCCCCcceeEEEEcc-
Q psy11518 34 ETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISC-SDDGSIAIFRVGS-WQLE--KLFKKAHKGTAVNHISIHP- 108 (139)
Q Consensus 34 ~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~~d~~~-~~~~--~~~~~~~~~~~v~~~~~~~- 108 (139)
+.|.-++. ++ +..+...-...+.++|+|+++.+..+ +..+.|..|++.. +... ..+ .. ...+-.+++.+
T Consensus 203 g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~-~g~PDGi~vD~e 276 (355)
T 3sre_A 203 SFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SF-DTLVDNISVDPV 276 (355)
T ss_dssp EEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--EC-SSEEEEEEECTT
T ss_pred cEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eC-CCCCceEEEeCC
Confidence 44555554 33 22222223456899999999877654 5578899999863 3332 233 12 23378899999
Q ss_pred CCcEEEEEc
Q psy11518 109 SGKLALSVG 117 (139)
Q Consensus 109 ~~~~l~~~~ 117 (139)
+|.+.+++.
T Consensus 277 ~G~lwva~~ 285 (355)
T 3sre_A 277 TGDLWVGCH 285 (355)
T ss_dssp TCCEEEEEE
T ss_pred CCcEEEEec
Confidence 598777664
No 328
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.18 E-value=1.9 Score=29.49 Aligned_cols=55 Identities=15% Similarity=0.247 Sum_probs=35.2
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCC------CCcceeEEEEccC
Q psy11518 55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH------KGTAVNHISIHPS 109 (139)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~------~~~~v~~~~~~~~ 109 (139)
.....++|.|+++++++-...+.|..++..++.......... ....+..++|+|+
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 355799999999987776554568888765554433221211 1122779999994
No 329
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.08 E-value=1.5 Score=28.01 Aligned_cols=107 Identities=17% Similarity=0.216 Sum_probs=56.7
Q ss_pred CCcEEEEeCCC-------CeEEEEEccCCcee--eEEEecCCCeEEEEECCCCCEEEEecC------CCcEEEEEeCCce
Q psy11518 23 TSKLAASSGAD-------ETVVLYDMVKRKQS--GALMQHEGTITCLKFTPEGSHLISCSD------DGSIAIFRVGSWQ 87 (139)
Q Consensus 23 ~~~~l~~~~~~-------~~v~i~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~~~~~ 87 (139)
++.+++.|+.+ ..+.+||+.+.+=. ..+.........+. .+++.++.|+. -..+..||..+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 67777777753 35778887665311 11111111112222 35666666654 2358899988776
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCC-----CeEEEEEcCCCcee
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKD-----KTLRTWNLVKGRSA 133 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~ 133 (139)
....-..+.... -.+++. -++++++.|+.+ ..+.+||+.+.+..
T Consensus 187 W~~~~~~p~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 187 WKDLAPMKTPRS-MFGVAI-HKGKIVIAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp EEEECCCSSCCB-SCEEEE-ETTEEEEEEEEETTEEEEEEEEEETTTCCEE
T ss_pred EEECCCCCCCcc-cceEEE-ECCEEEEEcCcCCCCccceEEEEECCCCeEE
Confidence 544321121111 112222 367777877643 35778998877644
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=91.95 E-value=1.8 Score=28.72 Aligned_cols=132 Identities=14% Similarity=0.168 Sum_probs=78.3
Q ss_pred EEEeecceeeEEEEec-CCcEEEEeCCCCeEEEEEccC-CceeeEEEecC----CCeEEEEECCCCCEEEEec-------
Q psy11518 7 TFVTHSHTASVRSVAA-TSKLAASSGADETVVLYDMVK-RKQSGALMQHE----GTITCLKFTPEGSHLISCS------- 73 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~------- 73 (139)
.++.+.....|.-+.| +.+.|+..+. ..|.-|+++. ..+.+.+..|. ..|..-..+++.++++..+
T Consensus 99 klks~~~~e~VvfWkWis~~~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~ 177 (365)
T 2xzh_A 99 KMKAHTMTDDVTFWKWISLNTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNR 177 (365)
T ss_dssp EEEEEECSSCEEEEEECSSSEEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTE
T ss_pred hhcceecCCccEEEEecCCCeEEEEcC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCc
Confidence 3444445678888998 6666665553 5688899864 45666666553 2344555566777654222
Q ss_pred CCCcEEEEEeCCc------------------------------------eEEEEEEeCCC--Cc----------------
Q psy11518 74 DDGSIAIFRVGSW------------------------------------QLEKLFKKAHK--GT---------------- 99 (139)
Q Consensus 74 ~d~~i~~~d~~~~------------------------------------~~~~~~~~~~~--~~---------------- 99 (139)
-.|.+.+|..+.. ..+..++..+. +.
T Consensus 178 v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea 257 (365)
T 2xzh_A 178 VVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 257 (365)
T ss_dssp EEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTC
T ss_pred cceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccc
Confidence 1234555544321 11122222111 00
Q ss_pred ---ceeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEecC
Q psy11518 100 ---AVNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNLS 139 (139)
Q Consensus 100 ---~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 139 (139)
=+.++..++....+...+--|.+++||++++..++.-.++
T Consensus 258 ~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS 300 (365)
T 2xzh_A 258 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS 300 (365)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred cCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccC
Confidence 0344556666667777888899999999999999876654
No 331
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=91.76 E-value=1.9 Score=28.41 Aligned_cols=74 Identities=14% Similarity=0.114 Sum_probs=44.2
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEEeCCce-EEEEEEe-CCCCcceeEEEEccC----CcEEEEEcC---C----Ce
Q psy11518 55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ-LEKLFKK-AHKGTAVNHISIHPS----GKLALSVGK---D----KT 121 (139)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~-~~~~~~v~~~~~~~~----~~~l~~~~~---d----~~ 121 (139)
.....++|.|+++++++ ..++.|.++| ..+. ....+.. ......+..++++|+ +.++++-.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 44689999999985555 4558898887 3454 1111110 111123789999997 444444332 3 56
Q ss_pred EEEEEcCCC
Q psy11518 122 LRTWNLVKG 130 (139)
Q Consensus 122 i~i~d~~~~ 130 (139)
|..|+....
T Consensus 107 v~r~~~~~~ 115 (354)
T 3a9g_A 107 VIRGRLDGS 115 (354)
T ss_dssp EEEEEECSS
T ss_pred EEEEEECCC
Confidence 777777654
No 332
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.59 E-value=2 Score=28.42 Aligned_cols=99 Identities=15% Similarity=0.111 Sum_probs=56.3
Q ss_pred EEEecCCcEEEEeCCCCeEEEEEccCCceee--EE----EecCCCeEEEEECCC----CCEEEEe--cCCCcEEEEEeCC
Q psy11518 18 RSVAATSKLAASSGADETVVLYDMVKRKQSG--AL----MQHEGTITCLKFTPE----GSHLISC--SDDGSIAIFRVGS 85 (139)
Q Consensus 18 ~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~--~~----~~~~~~v~~~~~~~~----~~~l~~~--~~d~~i~~~d~~~ 85 (139)
+.+.+++.++++-...|.|++++...++... .+ .........++++|+ +...++- ..+..|.-|....
T Consensus 37 ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~ 116 (347)
T 3das_A 37 LAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDE 116 (347)
T ss_dssp EEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCT
T ss_pred EEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCC
Confidence 3444588888877768999998866554321 11 123456789999995 3333322 2344555555543
Q ss_pred c----------eEEE-EEEeCCCCcceeEEEEccCCcEEEEEc
Q psy11518 86 W----------QLEK-LFKKAHKGTAVNHISIHPSGKLALSVG 117 (139)
Q Consensus 86 ~----------~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~ 117 (139)
. +.+. .+.. ...+....+.|.|+|.++++.+
T Consensus 117 ~~~~~~~~~~~~~i~~~~p~-~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 117 KKPSGEQLGAPDTVFRGIPK-GVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp TSCTTCCBCCCEEEEEEECC-CSSCCCCCEEECTTSCEEEECB
T ss_pred CCcccccCCCcEEEEEcCCC-CCCccCccccCCCCCCEEEEEC
Confidence 1 1111 2211 1112256799999998777755
No 333
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=91.49 E-value=0.62 Score=33.96 Aligned_cols=36 Identities=8% Similarity=0.178 Sum_probs=29.4
Q ss_pred eeEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
|.++.+ +..++++-+.|.++++||+++++.+....+
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444444 578999999999999999999998887654
No 334
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=91.25 E-value=3 Score=29.77 Aligned_cols=60 Identities=17% Similarity=0.205 Sum_probs=40.9
Q ss_pred CeEEEEECCCCCEEEEecC------------CCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEE
Q psy11518 56 TITCLKFTPEGSHLISCSD------------DGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSV 116 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~------------d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 116 (139)
....|.|+++|.+.+..+. ...+..++..+++....+ .......++.++|+||++.|+++
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl-~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM-VGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEE-ECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEE-eCCCCccccCCEECCCCCEEEEE
Confidence 4567899999998874332 124566666667766655 32233448999999999988765
No 335
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.93 E-value=2.2 Score=27.69 Aligned_cols=99 Identities=7% Similarity=0.040 Sum_probs=44.6
Q ss_pred CeEEEEEccCCce--eeEEEe-cCCCeEEEEECCCCCEEEEecC------CCcEEEEEe--CCceEEEEEEeCCCCccee
Q psy11518 34 ETVVLYDMVKRKQ--SGALMQ-HEGTITCLKFTPEGSHLISCSD------DGSIAIFRV--GSWQLEKLFKKAHKGTAVN 102 (139)
Q Consensus 34 ~~v~i~~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~~~~~------d~~i~~~d~--~~~~~~~~~~~~~~~~~v~ 102 (139)
..+.+||+.+.+= +..+.. .......+.+ +++.++.|+. ...+..||+ .+......-..........
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~ 245 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAG 245 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBS
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCccccc
Confidence 4788999877532 221111 1111222222 5566666653 235677876 4333322211111111112
Q ss_pred EEEEccCCcEEEEEcCC----------------------CeEEEEEcCCCceeE
Q psy11518 103 HISIHPSGKLALSVGKD----------------------KTLRTWNLVKGRSAY 134 (139)
Q Consensus 103 ~~~~~~~~~~l~~~~~d----------------------~~i~i~d~~~~~~~~ 134 (139)
+.+...++++++.|+.+ ..+.+||+.+.+...
T Consensus 246 ~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~ 299 (357)
T 2uvk_A 246 GFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDK 299 (357)
T ss_dssp CEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEE
T ss_pred ceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceee
Confidence 22233467777887732 257889998765443
No 336
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=90.93 E-value=2.3 Score=27.90 Aligned_cols=96 Identities=13% Similarity=0.175 Sum_probs=53.6
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCce--eeEEE---ecCCCeEEEEECCC---CCEEEEe-cCC-----CcEEEEEeC
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRKQ--SGALM---QHEGTITCLKFTPE---GSHLISC-SDD-----GSIAIFRVG 84 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~--~~~~~---~~~~~v~~~~~~~~---~~~l~~~-~~d-----~~i~~~d~~ 84 (139)
.+.+++.++++- .++.|.+++ +++. +..+. ........++++|+ +..+..+ ... ..|..++..
T Consensus 37 a~~pdG~l~V~e-~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~ 113 (352)
T 2ism_A 37 AFLPDGGMLIAE-RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL 113 (352)
T ss_dssp EECTTSCEEEEE-TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC
T ss_pred EEcCCCeEEEEe-CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC
Confidence 334478765554 558999888 4432 11111 12346789999998 4444433 322 567788876
Q ss_pred CceE---EEEEE-eC---CCCcceeEEEEccCCcEEEEEc
Q psy11518 85 SWQL---EKLFK-KA---HKGTAVNHISIHPSGKLALSVG 117 (139)
Q Consensus 85 ~~~~---~~~~~-~~---~~~~~v~~~~~~~~~~~l~~~~ 117 (139)
.... ...+. .+ ........++|.|+|.++++.+
T Consensus 114 ~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 114 GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 4321 11111 11 1112256899999998777654
No 337
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=90.85 E-value=0.6 Score=34.01 Aligned_cols=38 Identities=3% Similarity=-0.034 Sum_probs=31.8
Q ss_pred eeEEEEecCCcEEEEeCCCCeEEEEEccCCceeeEEEe
Q psy11518 15 ASVRSVAATSKLAASSGADETVVLYDMVKRKQSGALMQ 52 (139)
Q Consensus 15 ~~v~~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~ 52 (139)
..|.++.++..++++-+.|+++|+|++++++++.+..-
T Consensus 222 ~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34666677888999999999999999999988877653
No 338
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=90.34 E-value=2.6 Score=30.13 Aligned_cols=91 Identities=13% Similarity=0.223 Sum_probs=66.7
Q ss_pred EEEeCCCCeEEEEEccCCceeeEEEec-------------------------CCC--eEEEEECC---CCCEEEEecC-C
Q psy11518 27 AASSGADETVVLYDMVKRKQSGALMQH-------------------------EGT--ITCLKFTP---EGSHLISCSD-D 75 (139)
Q Consensus 27 l~~~~~~~~v~i~~~~~~~~~~~~~~~-------------------------~~~--v~~~~~~~---~~~~l~~~~~-d 75 (139)
+.+|+..|.|+++-+.+++.+..+.-. .+. -..+++.. +|+++..-.. +
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdkan 152 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKAN 152 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETTT
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCCC
Confidence 778999999999999998877665210 000 12344432 6788877765 5
Q ss_pred CcEEEEEeCCceEEEEEEeCCCCcceeEEEEc--cCCcEEEEEcC
Q psy11518 76 GSIAIFRVGSWQLEKLFKKAHKGTAVNHISIH--PSGKLALSVGK 118 (139)
Q Consensus 76 ~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~~~~~ 118 (139)
..|-..+++..+....+..+.... +.+++|- |+..+++++++
T Consensus 153 ~RvAri~l~~~~~d~Ii~iPn~~~-~Hg~~~~~~p~T~yv~~~~e 196 (638)
T 3sbq_A 153 SRVARIRLDIMKCDKMITVPNVQA-IHGLRLQKVPHTKYVFANAE 196 (638)
T ss_dssp TEEEEEETTTTEEEEEEECTTCSC-EEEEEECCSSBCCEEEEEEC
T ss_pred cceEEEECCcEeeceeEeCCCCcC-cccccccccCCccEEEecce
Confidence 668888999999888887776666 8888887 78888888875
No 339
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.29 E-value=2.2 Score=28.05 Aligned_cols=71 Identities=18% Similarity=0.285 Sum_probs=41.4
Q ss_pred CeEEEEECCCCC-EEEEecCCCcEEEEEeCCceEEEEEE------eCCCCcceeEEEEccC----CcEEEEEcC------
Q psy11518 56 TITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQLEKLFK------KAHKGTAVNHISIHPS----GKLALSVGK------ 118 (139)
Q Consensus 56 ~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~~------~~~~~~~v~~~~~~~~----~~~l~~~~~------ 118 (139)
....++|.|+++ ++++ ...|.|.+++.. +.....+. ...... +..++++|+ +.+.++-..
T Consensus 19 ~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g-~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGG-LLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SEEEEEECSTTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCS-EEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CcEEEEEcCCCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCC-ceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 458999999999 5544 457889988843 33221110 111223 688999995 444444322
Q ss_pred -CCeEEEEEcCC
Q psy11518 119 -DKTLRTWNLVK 129 (139)
Q Consensus 119 -d~~i~i~d~~~ 129 (139)
...|.-|++..
T Consensus 96 ~~~~v~r~~~~~ 107 (353)
T 2g8s_A 96 AGTAVGYGRLSD 107 (353)
T ss_dssp EEEEEEEEEECT
T ss_pred ceeEEEEEEECC
Confidence 23566666643
No 340
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=89.98 E-value=6.5 Score=31.60 Aligned_cols=126 Identities=13% Similarity=0.163 Sum_probs=70.9
Q ss_pred cceeeEEEEec-CCcEEEEeCCCCeEEEEEccC-CceeeEEEec----CCCeEEEEECCCCCEEEEec-------CCCcE
Q psy11518 12 SHTASVRSVAA-TSKLAASSGADETVVLYDMVK-RKQSGALMQH----EGTITCLKFTPEGSHLISCS-------DDGSI 78 (139)
Q Consensus 12 ~~~~~v~~~~~-~~~~l~~~~~~~~v~i~~~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~d~~i 78 (139)
....+|.-+.| +.+.|+..+ +..|.-|++.. ..|...|..| ...|..-.-+++.++++..+ -.|.+
T Consensus 103 ~~~e~VvfWkWis~~~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~m 181 (1630)
T 1xi4_A 103 TMTDDVTFWKWISLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAM 181 (1630)
T ss_pred ccCCCceEEEecCCCeeEEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCccccee
Confidence 34567888888 666666555 35688899863 3454444444 23444445566666654221 23556
Q ss_pred EEEEeCCc------------------------------------eEEEEEEeCCC--Cc-------------------ce
Q psy11518 79 AIFRVGSW------------------------------------QLEKLFKKAHK--GT-------------------AV 101 (139)
Q Consensus 79 ~~~d~~~~------------------------------------~~~~~~~~~~~--~~-------------------~v 101 (139)
.+|..... ..+..+...+. +. -+
T Consensus 182 QLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfp 261 (1630)
T 1xi4_A 182 QLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFP 261 (1630)
T ss_pred eeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcc
Confidence 66654221 11111111111 00 02
Q ss_pred eEEEEccCCcEEEEEcCCCeEEEEEcCCCceeEEEec
Q psy11518 102 NHISIHPSGKLALSVGKDKTLRTWNLVKGRSAYITNL 138 (139)
Q Consensus 102 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (139)
.++..++....+...+.-|.+++||+.++..++.-.+
T Consensus 262 v~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ri 298 (1630)
T 1xi4_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRI 298 (1630)
T ss_pred eEEEeccccCEEEEEecCceEEEEecccchhhhhccc
Confidence 3455556566677777889999999999988765443
No 341
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=89.83 E-value=2.9 Score=27.40 Aligned_cols=73 Identities=18% Similarity=0.267 Sum_probs=45.4
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeC---CCCcceeEEEEccC---CcEE-EEEcCC-----CeE
Q psy11518 55 GTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA---HKGTAVNHISIHPS---GKLA-LSVGKD-----KTL 122 (139)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l-~~~~~d-----~~i 122 (139)
.....++|.|+++++++ ...+.|.+++ .+......... ........++++|+ +..| ++-... +.|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34579999999986655 4568899888 44432222111 11223889999998 4444 443332 678
Q ss_pred EEEEcCCC
Q psy11518 123 RTWNLVKG 130 (139)
Q Consensus 123 ~i~d~~~~ 130 (139)
..|+...+
T Consensus 108 ~r~~~~~~ 115 (352)
T 2ism_A 108 VRLRHLGE 115 (352)
T ss_dssp EEEEECSS
T ss_pred EEEEeCCC
Confidence 88887654
No 342
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.00 E-value=3.9 Score=26.43 Aligned_cols=104 Identities=13% Similarity=0.151 Sum_probs=55.3
Q ss_pred eEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEE-EecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEE
Q psy11518 16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 92 (139)
.+..+.+ ++.+++.+...+..+-.|- .++.-..+ ......+..+.+.++++.++.+ .+|.+...+...++.-..+
T Consensus 164 ~~~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~-~~G~~~~s~~D~G~tW~~~ 241 (327)
T 2xbg_A 164 VMRNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRLWMIV-NGGKIAFSDPDNSENWGEL 241 (327)
T ss_dssp CEEEEEECTTSCEEEEETTSSEEEEECT-TCSSCEEEECCSSSCEEEEEECTTSCEEEEE-TTTEEEEEETTEEEEECCC
T ss_pred ceEEEEEcCCCcEEEEECCCcEEEEeCC-CCCceeECCCCCCCccceeEECCCCCEEEEe-CCceEEEecCCCCCeeEec
Confidence 4455554 6667766655444444432 12222222 1344567888999988766554 4676666532223322222
Q ss_pred EeC--CCCcceeEEEEccCCcEEEEEcCCCeE
Q psy11518 93 KKA--HKGTAVNHISIHPSGKLALSVGKDKTL 122 (139)
Q Consensus 93 ~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i 122 (139)
..+ .....+..+.+.+++..++++. ++.+
T Consensus 242 ~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 242 LSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp BCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred cCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 112 1112378889988777666654 5555
No 343
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.80 E-value=1.4 Score=33.18 Aligned_cols=37 Identities=19% Similarity=0.167 Sum_probs=31.5
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEE
Q psy11518 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLF 92 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~ 92 (139)
.+.++...++..++++-+.|+++++|++.++++....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4567777778889999999999999999999887765
No 344
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=87.52 E-value=5.5 Score=27.67 Aligned_cols=67 Identities=12% Similarity=0.034 Sum_probs=48.6
Q ss_pred EEecCCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCC
Q psy11518 19 SVAATSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGS 85 (139)
Q Consensus 19 ~~~~~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~ 85 (139)
.++..-..++.-+.-|.+++||++++.++..-+-....|...+......-++...++|.|.-..++.
T Consensus 265 qvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 265 QISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp EEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred EecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 3444555677778889999999999999988776677777666666556666666777766655544
No 345
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=87.32 E-value=6.4 Score=28.19 Aligned_cols=110 Identities=9% Similarity=0.005 Sum_probs=64.5
Q ss_pred EEEec-CCcEEEEeCCCCeEEEEEccCCceeeEEE-ecCCCeEEEEECCC-CCEEEEecC-CCcEEEEEeCCceEEEEEE
Q psy11518 18 RSVAA-TSKLAASSGADETVVLYDMVKRKQSGALM-QHEGTITCLKFTPE-GSHLISCSD-DGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 18 ~~~~~-~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~l~~~~~-d~~i~~~d~~~~~~~~~~~ 93 (139)
+++.| .+++..+-...+.|.+.++.... ...+. ..-.....+++.|. |.++.+-.. .+.|...++..... ..+.
T Consensus 397 lAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~-~~l~ 474 (619)
T 3s94_A 397 IAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR-VVLV 474 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEE
T ss_pred eEEecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc-EEEE
Confidence 34455 45566666677888888876543 33332 23345689999986 444444322 35666666543322 2231
Q ss_pred eCCCCcceeEEEEccCCcEE-EEEcCCCeEEEEEcCCC
Q psy11518 94 KAHKGTAVNHISIHPSGKLA-LSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~i~d~~~~ 130 (139)
...-.. +..+++++++..| ++-+..+.|..+++...
T Consensus 475 ~~~l~~-P~GlalD~~~~~LY~aD~~~~~I~~~~~dG~ 511 (619)
T 3s94_A 475 NTSLGW-PNGLALDYDEGKIYWGDAKTDKIEVMNTDGT 511 (619)
T ss_dssp CSSCSC-EEEEEEETTTTEEEEEETTTTEEEEEESSSC
T ss_pred eCCCCC-CeeeEEcccCCEEEEEECCCCEEEEEecCCC
Confidence 222233 7889999865554 44456678888888544
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=86.47 E-value=4.6 Score=25.72 Aligned_cols=110 Identities=12% Similarity=0.065 Sum_probs=57.0
Q ss_pred ecCCcEEEEeCC----CC-------eEEEEEccCCce--eeEEEecCCCeEEEEECCCCCEEEEecCC-------CcEEE
Q psy11518 21 AATSKLAASSGA----DE-------TVVLYDMVKRKQ--SGALMQHEGTITCLKFTPEGSHLISCSDD-------GSIAI 80 (139)
Q Consensus 21 ~~~~~~l~~~~~----~~-------~v~i~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~ 80 (139)
..++.+++.|+. ++ .+..||+.+.+= +..+.........+.+ ++..++.|+.+ ..+.+
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence 347788888873 11 267788766531 1111111112223333 55666666653 23778
Q ss_pred EEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcC------CCeEEEEEcCCCceeE
Q psy11518 81 FRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK------DKTLRTWNLVKGRSAY 134 (139)
Q Consensus 81 ~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~ 134 (139)
||..+.+....-..+.... -.+++ ..++++++.|+. -..+.+||+.+.+...
T Consensus 132 yd~~~~~W~~~~~~p~~r~-~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~ 189 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIKVY-GHNVI-SHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKD 189 (318)
T ss_dssp EETTTTEEEEECCCSSCEE-SCEEE-EETTEEEEECCEESSSCBCCCEEEEETTTTEEEE
T ss_pred EeCCCCCEeECCCCCCccc-ccEEE-EECCEEEEEcCCCCCCCccceEEEEcCCCCEEEE
Confidence 8887766543321111111 11122 246777777764 2458999998876443
No 347
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.38 E-value=5 Score=26.00 Aligned_cols=95 Identities=13% Similarity=0.123 Sum_probs=49.0
Q ss_pred cCCcEEEEeCC-CCeEEEEEccC--C--ceeeEEE-ecCCCeEEEEECCCCCEEEEecC-C---------CcEEEEEeCC
Q psy11518 22 ATSKLAASSGA-DETVVLYDMVK--R--KQSGALM-QHEGTITCLKFTPEGSHLISCSD-D---------GSIAIFRVGS 85 (139)
Q Consensus 22 ~~~~~l~~~~~-~~~v~i~~~~~--~--~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~-d---------~~i~~~d~~~ 85 (139)
.++.+++.|+. ...+..||+.+ . +.+..+. ........+.+ +++.++.|+. + ..+..||..+
T Consensus 18 ~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 18 DNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp ETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred ECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 36777777764 34688889864 2 1111111 11122233333 5666666665 2 3588899887
Q ss_pred ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC
Q psy11518 86 WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD 119 (139)
Q Consensus 86 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 119 (139)
.+....-... ........+...++++++.|+.+
T Consensus 96 ~~W~~~~~~~-p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 96 NSWVKLMSHA-PMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp TEEEECSCCC-SSCCSSEEEEEETTEEEEEECCC
T ss_pred CcEEECCCCC-CcccccceEEEECCEEEEEeCcC
Confidence 7654432111 11111222222578888888754
No 348
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=86.14 E-value=7 Score=31.45 Aligned_cols=104 Identities=13% Similarity=0.211 Sum_probs=65.3
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce-EEEEEEeC--CCCc
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ-LEKLFKKA--HKGT 99 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~-~~~~~~~~--~~~~ 99 (139)
..+.++.-. ..++.|+|+++...+..+.- ...|.-..|-.... ++-.+ +..|.-|++.... +...+... -.+.
T Consensus 76 ~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~-l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~ 151 (1630)
T 1xi4_A 76 ASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNT-VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGC 151 (1630)
T ss_pred CcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCe-eEEEc-CCeEEEeccCCCCccHHHHhcchhcccC
Confidence 444455443 68899999998887776653 34678888875443 33222 2369999996432 32222111 1133
Q ss_pred ceeEEEEccCCcEEEEEc-------CCCeEEEEEcCCC
Q psy11518 100 AVNHISIHPSGKLALSVG-------KDKTLRTWNLVKG 130 (139)
Q Consensus 100 ~v~~~~~~~~~~~l~~~~-------~d~~i~i~d~~~~ 130 (139)
.|..-..+++.+|++..| -.|.+.+|+.+.+
T Consensus 152 QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~ 189 (1630)
T 1xi4_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 189 (1630)
T ss_pred eeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc
Confidence 477788889999887654 2477888877654
No 349
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=85.91 E-value=5.6 Score=26.11 Aligned_cols=99 Identities=9% Similarity=0.165 Sum_probs=51.8
Q ss_pred EEEecCCc-EEEEeCCCCeEEEEEccCCce---eeEE----EecCCCeEEEEECCC---CCEE-EEecC-------CCcE
Q psy11518 18 RSVAATSK-LAASSGADETVVLYDMVKRKQ---SGAL----MQHEGTITCLKFTPE---GSHL-ISCSD-------DGSI 78 (139)
Q Consensus 18 ~~~~~~~~-~l~~~~~~~~v~i~~~~~~~~---~~~~----~~~~~~v~~~~~~~~---~~~l-~~~~~-------d~~i 78 (139)
+.+.++++ ++++ ...+.|++++.. +.. +..+ .........++++|+ ...+ ++-.. ...|
T Consensus 23 i~~~pdG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v 100 (353)
T 2g8s_A 23 LAFLPDNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAV 100 (353)
T ss_dssp EEECSTTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEE
T ss_pred EEEcCCCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEE
Confidence 33445888 5554 456899998853 322 1111 112345688999995 4444 33222 2246
Q ss_pred EEEEeCCc--e--EEE-EEE-eC---CCCcceeEEEEccCCcEEEEEcC
Q psy11518 79 AIFRVGSW--Q--LEK-LFK-KA---HKGTAVNHISIHPSGKLALSVGK 118 (139)
Q Consensus 79 ~~~d~~~~--~--~~~-~~~-~~---~~~~~v~~~~~~~~~~~l~~~~~ 118 (139)
..++.... . ... .+. .. ........++|.|+|.++++.++
T Consensus 101 ~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 101 GYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred EEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 66666432 1 111 111 11 11111467999999987776544
No 350
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=85.49 E-value=6 Score=26.16 Aligned_cols=76 Identities=14% Similarity=0.102 Sum_probs=47.4
Q ss_pred CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeC----CCCcceeEEEEccC----CcEEEEE--cCCCeEE
Q psy11518 54 EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKA----HKGTAVNHISIHPS----GKLALSV--GKDKTLR 123 (139)
Q Consensus 54 ~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~----~~~~~v~~~~~~~~----~~~l~~~--~~d~~i~ 123 (139)
-.....++|.|+++++++--..|.|..++...+......... ........++++|+ +.+.++- ..++.|.
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 345689999999998877766899998886555543222111 11223789999995 4444432 2445566
Q ss_pred EEEcCC
Q psy11518 124 TWNLVK 129 (139)
Q Consensus 124 i~d~~~ 129 (139)
-|.+..
T Consensus 111 R~~~~~ 116 (347)
T 3das_A 111 RMLYDE 116 (347)
T ss_dssp EEEBCT
T ss_pred EEEeCC
Confidence 666554
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=83.87 E-value=8.5 Score=26.53 Aligned_cols=101 Identities=13% Similarity=0.125 Sum_probs=53.4
Q ss_pred EEecCCc-EEEEeCCCCeEEEEEccCCc---eeeEEE-----e----cCCCeEEEEECCC----CCEEEEecC--C----
Q psy11518 19 SVAATSK-LAASSGADETVVLYDMVKRK---QSGALM-----Q----HEGTITCLKFTPE----GSHLISCSD--D---- 75 (139)
Q Consensus 19 ~~~~~~~-~l~~~~~~~~v~i~~~~~~~---~~~~~~-----~----~~~~v~~~~~~~~----~~~l~~~~~--d---- 75 (139)
.+.+++. .++++...|.|++++..... .+..+. + .......++|+|+ +.+.++-+. +
T Consensus 20 a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~~~~~ 99 (463)
T 2wg3_C 20 LHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQERWAI 99 (463)
T ss_dssp ECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCCSSCS
T ss_pred EECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCCCccc
Confidence 3334774 34455667999999754321 222211 1 1356788999996 333333221 1
Q ss_pred ------CcEEEEEeCC----------ceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCC
Q psy11518 76 ------GSIAIFRVGS----------WQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKD 119 (139)
Q Consensus 76 ------~~i~~~d~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 119 (139)
..|.-|.+.. .+.+..+........-..|.|.|||.++++.++.
T Consensus 100 ~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 100 GPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp SSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 1343455432 1233333222222236789999999988877654
No 352
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.59 E-value=1.5 Score=33.71 Aligned_cols=36 Identities=14% Similarity=0.122 Sum_probs=29.2
Q ss_pred EEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEE
Q psy11518 58 TCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 58 ~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.+++..++..++++-+.|+++++|++.+++++....
T Consensus 241 vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 241 ISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp SCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred EEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 444555677899999999999999999998877653
No 353
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=80.30 E-value=13 Score=26.27 Aligned_cols=69 Identities=9% Similarity=0.078 Sum_probs=43.3
Q ss_pred CeEEEEECC--CCCEEEEecCCCcEEEEEeCCc----eEEEEEEeCCCCccee-EEEEccCCcEEEEEcCCCeEEE
Q psy11518 56 TITCLKFTP--EGSHLISCSDDGSIAIFRVGSW----QLEKLFKKAHKGTAVN-HISIHPSGKLALSVGKDKTLRT 124 (139)
Q Consensus 56 ~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~----~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~i 124 (139)
..++++... +...+..|..+|.|.-..+... .....+.....+.+|. .+.+++++..|++++.++.++|
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 456665544 3345678888998765444322 2333443333344574 8999999999999988765554
No 354
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=76.42 E-value=13 Score=23.98 Aligned_cols=102 Identities=14% Similarity=0.199 Sum_probs=54.8
Q ss_pred EEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEE-EecCCCeEEEEECCCCCEEEEecCCCcEEEEEe--CCceEEEE
Q psy11518 17 VRSVAA--TSKLAASSGADETVVLYDMVKRKQSGAL-MQHEGTITCLKFTPEGSHLISCSDDGSIAIFRV--GSWQLEKL 91 (139)
Q Consensus 17 v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~--~~~~~~~~ 91 (139)
+..+.+ ++..++++. ++.|.. ..+.++.-... ......+..+.+.+++.+++.+...+..+-.|- .+.+...
T Consensus 124 ~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~- 200 (327)
T 2xbg_A 124 PRLIKALGNGSAEMITN-VGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHN- 200 (327)
T ss_dssp EEEEEEEETTEEEEEET-TCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEE-
T ss_pred eEEEEEECCCCEEEEeC-CccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECC-
Confidence 344443 555555554 443321 12234333222 234456889999998888877754433333442 3333331
Q ss_pred EEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEE
Q psy11518 92 FKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTW 125 (139)
Q Consensus 92 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~ 125 (139)
..... .+..+.+.+++..++. +.+|.++..
T Consensus 201 --~~~~~-~~~~~~~~~~g~~~~~-~~~G~~~~s 230 (327)
T 2xbg_A 201 --RTTSR-RLHNMGFTPDGRLWMI-VNGGKIAFS 230 (327)
T ss_dssp --CCSSS-CEEEEEECTTSCEEEE-ETTTEEEEE
T ss_pred --CCCCC-ccceeEECCCCCEEEE-eCCceEEEe
Confidence 22233 3788889888876544 456666665
No 355
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=76.08 E-value=13 Score=23.91 Aligned_cols=104 Identities=10% Similarity=0.079 Sum_probs=54.5
Q ss_pred EEEEecCCcEEEEeCC--------------CCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEEEec----CCCcE
Q psy11518 17 VRSVAATSKLAASSGA--------------DETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLISCS----DDGSI 78 (139)
Q Consensus 17 v~~~~~~~~~l~~~~~--------------~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~d~~i 78 (139)
+..+.++++.|+-... ...|+..++...+. ..+.. .. ...|+++++.++-.. ....|
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~-~~l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGS-TVLDP--DP--CIYASLIGNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCC-EEEEC--SC--EEEEEEETTEEEEEEESSSSCEEE
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcc-eEeec--CC--ccEEEEeCCEEEEEeecCCCCceE
Confidence 3445557776664433 24666667665542 22222 12 235677778776544 33445
Q ss_pred EEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcC-CCeEEEEEcCCCce
Q psy11518 79 AIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGK-DKTLRTWNLVKGRS 132 (139)
Q Consensus 79 ~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~ 132 (139)
...++......... .+. + .+++|+++.|+-.+. ...|...++..+..
T Consensus 132 y~~~~dGs~~~~lt--~~~---~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~ 179 (302)
T 3s25_A 132 YRIRIDGEEKKKIK--NHY---L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSE 179 (302)
T ss_dssp EEEETTSCCCEEEE--SSC---C--CCSEEETTEEEEECTTTCCEEEEETTTTEE
T ss_pred EEEECCCCCeEEEe--CCC---c--eEeeEECCEEEEEeCCCceEEEEECCCCCE
Confidence 55565543333222 221 1 345667776664443 56777777765543
No 356
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=75.08 E-value=22 Score=25.99 Aligned_cols=57 Identities=9% Similarity=0.072 Sum_probs=37.0
Q ss_pred EEEEecCCCcEE-EEEeCCce-------EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEE
Q psy11518 68 HLISCSDDGSIA-IFRVGSWQ-------LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (139)
Q Consensus 68 ~l~~~~~d~~i~-~~d~~~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 124 (139)
.+..|..+|.|. +....... .+..+.....+.+|..|.++++.+.|++++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 466788888864 33322211 2333333345556899999999999999998876655
No 357
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=73.43 E-value=21 Score=24.99 Aligned_cols=69 Identities=9% Similarity=0.051 Sum_probs=42.1
Q ss_pred CeEEEEECC----CC--CEEEEecCCCcEEEEEeC-Cce-------EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCe
Q psy11518 56 TITCLKFTP----EG--SHLISCSDDGSIAIFRVG-SWQ-------LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKT 121 (139)
Q Consensus 56 ~v~~~~~~~----~~--~~l~~~~~d~~i~~~d~~-~~~-------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 121 (139)
..++++... ++ ..+..|..+|.|.-.-+. .+. .+..+.....+.+|..|.++++...|++++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 456665542 23 346788889987543332 211 2223322223456899999999999999998876
Q ss_pred EEE
Q psy11518 122 LRT 124 (139)
Q Consensus 122 i~i 124 (139)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 358
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=55.22 E-value=56 Score=23.55 Aligned_cols=57 Identities=12% Similarity=0.096 Sum_probs=35.8
Q ss_pred EEEEecCCCcEEEEEe-CCc----e-EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEE
Q psy11518 68 HLISCSDDGSIAIFRV-GSW----Q-LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRT 124 (139)
Q Consensus 68 ~l~~~~~d~~i~~~d~-~~~----~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i 124 (139)
.+..|..+|.|.-.-. ..+ . .+..+.......+|..+.++++...|++++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 4567888888754332 222 1 2222322223445889999999999999988876665
No 359
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=51.89 E-value=56 Score=22.55 Aligned_cols=53 Identities=13% Similarity=0.128 Sum_probs=32.1
Q ss_pred CeEEEEECCCCC-EEEEecCCCcEEEEEeCCce---EEEEEE--eC------CCCcceeEEEEccC
Q psy11518 56 TITCLKFTPEGS-HLISCSDDGSIAIFRVGSWQ---LEKLFK--KA------HKGTAVNHISIHPS 109 (139)
Q Consensus 56 ~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~---~~~~~~--~~------~~~~~v~~~~~~~~ 109 (139)
....|+|.|++. .++.+...|.|++++..... .+..+. .. .... +..++|+|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~G-llgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERG-LLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCS-EEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCc-ceeeEeCCC
Confidence 457899999986 45555678999998743221 111110 00 0223 788999995
No 360
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=50.58 E-value=68 Score=23.12 Aligned_cols=53 Identities=13% Similarity=0.196 Sum_probs=33.9
Q ss_pred EecCCcEEEEeCCC------------CeEEEEEccCCceeeEEEec-CCCeEEEEECCCCCEEEEe
Q psy11518 20 VAATSKLAASSGAD------------ETVVLYDMVKRKQSGALMQH-EGTITCLKFTPEGSHLISC 72 (139)
Q Consensus 20 ~~~~~~~l~~~~~~------------~~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 72 (139)
+.+.|.++++-..+ ..+.+.+..+++....+... ..+++.+.|+|+++.|...
T Consensus 483 fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 483 FDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp ECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred ECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34467766654432 34556666667655545443 4678999999998877655
No 361
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=49.47 E-value=49 Score=21.21 Aligned_cols=101 Identities=4% Similarity=0.008 Sum_probs=53.3
Q ss_pred EEecCCcEEEEeC----CCCeEEEEEccCCceeeEEEecCCCeEEEEECCCCCEEE-EecCCCcEEEEEeCCceEEEEEE
Q psy11518 19 SVAATSKLAASSG----ADETVVLYDMVKRKQSGALMQHEGTITCLKFTPEGSHLI-SCSDDGSIAIFRVGSWQLEKLFK 93 (139)
Q Consensus 19 ~~~~~~~~l~~~~----~~~~v~i~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~~d~~~~~~~~~~~ 93 (139)
.++++++.|+-.. .+..|...++. +.....+..+.. .+++++++.|. +......|...++..+.....+
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d-Gs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~- 183 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRID-GEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFY- 183 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETT-SCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEE-
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECC-CCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEe-
Confidence 4555666666443 33455555554 333444444432 34566777776 4444677888888766544333
Q ss_pred eCCCCcceeEEEEccCCcEEEEEcCC--CeEEEEEcCCC
Q psy11518 94 KAHKGTAVNHISIHPSGKLALSVGKD--KTLRTWNLVKG 130 (139)
Q Consensus 94 ~~~~~~~v~~~~~~~~~~~l~~~~~d--~~i~i~d~~~~ 130 (139)
.. . .. ..++|++.+|+-.... ..|..-++..+
T Consensus 184 -~~--~-~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~ 217 (302)
T 3s25_A 184 -DC--N-CY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP 217 (302)
T ss_dssp -CS--C-EE-EEEEEETTEEEEEEGGGTTEEEEECSSSC
T ss_pred -CC--C-cc-ceeeecCCEEEEEEcCCCcEEEEEECCCC
Confidence 11 1 22 2355877766654322 34555555443
No 362
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=48.34 E-value=70 Score=22.67 Aligned_cols=68 Identities=12% Similarity=0.124 Sum_probs=42.2
Q ss_pred CeEEEEECC--CCCEEEEecCCCcEEEEEeC-C--ceEEEEEEeCCCCcce-eEEEEccCCcEEEEEcCCCeEEE
Q psy11518 56 TITCLKFTP--EGSHLISCSDDGSIAIFRVG-S--WQLEKLFKKAHKGTAV-NHISIHPSGKLALSVGKDKTLRT 124 (139)
Q Consensus 56 ~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~-~--~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~i 124 (139)
..+.++... +...+..|..+|.|.-.-.. + ......+.. ..+.+| ..+.++++...|++++.++.+++
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 456666543 23345678888887644432 2 122334433 334447 48999999999999988877665
No 363
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=47.67 E-value=62 Score=21.82 Aligned_cols=81 Identities=10% Similarity=-0.011 Sum_probs=52.8
Q ss_pred CCeEEEEECCCCCEEE--EecC-------------CCcEEEEEeCCc--eEEEEEEeCCC----CcceeEEEEc---cC-
Q psy11518 55 GTITCLKFTPEGSHLI--SCSD-------------DGSIAIFRVGSW--QLEKLFKKAHK----GTAVNHISIH---PS- 109 (139)
Q Consensus 55 ~~v~~~~~~~~~~~l~--~~~~-------------d~~i~~~d~~~~--~~~~~~~~~~~----~~~v~~~~~~---~~- 109 (139)
-.|..+...+.+++.+ +|.. --+|.+||+.+. +.+..+..+.. ..-+..+.+. |+
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 3577778887777655 3311 125889999999 88888755422 2237778877 22
Q ss_pred ---CcEE-EEEcCCCeEEEEEcCCCceeEE
Q psy11518 110 ---GKLA-LSVGKDKTLRTWNLVKGRSAYI 135 (139)
Q Consensus 110 ---~~~l-~~~~~d~~i~i~d~~~~~~~~~ 135 (139)
+.++ ++-...+.|.++|+.+++.-..
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv 196 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNV 196 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEE
Confidence 2343 3444578899999999876543
No 364
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=44.00 E-value=94 Score=22.89 Aligned_cols=58 Identities=9% Similarity=0.144 Sum_probs=36.5
Q ss_pred CEEEEecCCCcEEEEEeCC----ceEEEEEEeCCCCcce-eEEEEccCCcEEEEEcCCCeEEE
Q psy11518 67 SHLISCSDDGSIAIFRVGS----WQLEKLFKKAHKGTAV-NHISIHPSGKLALSVGKDKTLRT 124 (139)
Q Consensus 67 ~~l~~~~~d~~i~~~d~~~----~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~d~~i~i 124 (139)
..+..|..+|.|.-.-+.. ......+.....+.+| ..+.++++...|++++.++.+++
T Consensus 413 tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~~Lyv~s~~~V~qv 475 (681)
T 3oky_A 413 SVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 475 (681)
T ss_dssp EEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCCEEEEEecCEEEEE
Confidence 4566888889876544432 1233343233233445 68999998889998888766555
No 365
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=41.65 E-value=69 Score=20.68 Aligned_cols=104 Identities=14% Similarity=0.071 Sum_probs=61.3
Q ss_pred CCcEEEEeCCCCeEEEEEccCC-------ceeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc-------eE
Q psy11518 23 TSKLAASSGADETVVLYDMVKR-------KQSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW-------QL 88 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-------~~ 88 (139)
+...++..+..|.++...+... .....+.. ...+..+....+...++..+.+|.+..+....- .-
T Consensus 113 ~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~G 191 (312)
T 1suu_A 113 DDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQG 191 (312)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCC
T ss_pred CCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCC
Confidence 3567788888898888776432 22222333 344555544444556778888888888876431 11
Q ss_pred EEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 89 EKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 89 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
...+.... +..+..+..-.++..+++.+..|.....++.
T Consensus 192 v~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 192 VCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred eEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 22222222 2335555554456667788888887777764
No 366
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=41.37 E-value=39 Score=17.77 Aligned_cols=13 Identities=15% Similarity=0.473 Sum_probs=7.4
Q ss_pred EecCCCcEEEEEe
Q psy11518 71 SCSDDGSIAIFRV 83 (139)
Q Consensus 71 ~~~~d~~i~~~d~ 83 (139)
.-..||.+.++|-
T Consensus 56 ~l~~dGnLvL~d~ 68 (105)
T 4h3o_A 56 VLQSDGNFVVYDS 68 (105)
T ss_dssp EECTTSCEEEECT
T ss_pred EEeCCccEEEECC
Confidence 3345666666664
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=41.09 E-value=1e+02 Score=22.36 Aligned_cols=38 Identities=13% Similarity=0.199 Sum_probs=26.7
Q ss_pred eEEEEEccCCceeeEEEec-CCCeEEEEECCCCCEEEEe
Q psy11518 35 TVVLYDMVKRKQSGALMQH-EGTITCLKFTPEGSHLISC 72 (139)
Q Consensus 35 ~v~i~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~~~ 72 (139)
.+..++..+++....+... ...++.++|+|+++.|...
T Consensus 510 ~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 5666677677655555432 3568999999999888665
No 368
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=40.08 E-value=43 Score=17.86 Aligned_cols=9 Identities=22% Similarity=0.434 Sum_probs=3.9
Q ss_pred CCCcEEEEE
Q psy11518 74 DDGSIAIFR 82 (139)
Q Consensus 74 ~d~~i~~~d 82 (139)
.||.+.++|
T Consensus 65 ~dGNLVl~d 73 (113)
T 3mez_B 65 HSGELDITD 73 (113)
T ss_dssp TTSCEEEEC
T ss_pred CCCcEEEEC
Confidence 344444443
No 369
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=37.38 E-value=1.1e+02 Score=21.80 Aligned_cols=58 Identities=9% Similarity=-0.039 Sum_probs=36.1
Q ss_pred CCcEEEEeCCCCeEEEEEccCCc----eeeEEEe--cCCCeE-EEEECCCCCEEEEecCCCcEEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKRK----QSGALMQ--HEGTIT-CLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~----~~~~~~~--~~~~v~-~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
+-..+..|+.+|.|.-..+.... ...++.- ...+|. .+.++++..+|..++.++.+++
T Consensus 412 ~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 412 GYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp TEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred CeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 34457788888887755544321 2222322 245675 8889998888888877654443
No 370
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=36.69 E-value=1.2e+02 Score=21.86 Aligned_cols=69 Identities=6% Similarity=-0.003 Sum_probs=42.0
Q ss_pred CeEEEEECC----C--CCEEEEecCCCcEE-EEEeCC-------ceEEEEEEeCC---------CCcceeEEEEccCCcE
Q psy11518 56 TITCLKFTP----E--GSHLISCSDDGSIA-IFRVGS-------WQLEKLFKKAH---------KGTAVNHISIHPSGKL 112 (139)
Q Consensus 56 ~v~~~~~~~----~--~~~l~~~~~d~~i~-~~d~~~-------~~~~~~~~~~~---------~~~~v~~~~~~~~~~~ 112 (139)
..+.++... + ...+..|..+|.|. +..... ...+..+..-. ...+|..+.++++...
T Consensus 404 ~lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~~ 483 (565)
T 3oky_B 404 RLTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASGS 483 (565)
T ss_dssp CEEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGTE
T ss_pred ceEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCCE
Confidence 356776653 2 34567888899875 433211 11222332111 1345889999999999
Q ss_pred EEEEcCCCeEEE
Q psy11518 113 ALSVGKDKTLRT 124 (139)
Q Consensus 113 l~~~~~d~~i~i 124 (139)
|++++.++.+++
T Consensus 484 LYV~s~~~V~qV 495 (565)
T 3oky_B 484 LYVAFSTCVIKV 495 (565)
T ss_dssp EEEECSSCEEEE
T ss_pred EEEEecCeEEEe
Confidence 999988877665
No 371
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=33.38 E-value=1.2e+02 Score=21.19 Aligned_cols=55 Identities=16% Similarity=0.119 Sum_probs=34.1
Q ss_pred EEEEeCCCCeEEEEEcc-CC-------ceeeEEEe--cCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy11518 26 LAASSGADETVVLYDMV-KR-------KQSGALMQ--HEGTITCLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 26 ~l~~~~~~~~v~i~~~~-~~-------~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
.+..|+.+|.|.-.-.. .. ..+.++.- ...+|..+.++++..+|..++.++.+++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 46677888876543332 11 12223332 3468899999999899988887765543
No 372
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=31.90 E-value=64 Score=17.40 Aligned_cols=44 Identities=11% Similarity=0.057 Sum_probs=21.1
Q ss_pred EEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEE
Q psy11518 69 LISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLAL 114 (139)
Q Consensus 69 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 114 (139)
.+.-..||.+.++|- .+..++......... ...+.+.++|.+++
T Consensus 64 ~l~l~~dGNLVl~d~-~~~~lW~S~~~~~~g-~~~l~l~~~Gnlvl 107 (119)
T 1b2p_A 64 RAVLQPDGVLVVITN-ENVTVWQSPVAGKAG-HYVLVLQPDRNVVI 107 (119)
T ss_dssp EEEECTTSCEEEECT-TCCEEEECSCCCCSS-CEEEEECTTSCEEE
T ss_pred EEEEccCCEEEEEeC-CCcEEEcCCCCCCCC-CEEEEEECCCcEEE
Confidence 444456777777763 344444432111111 33455555655444
No 373
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=31.04 E-value=1.5e+02 Score=21.54 Aligned_cols=108 Identities=8% Similarity=0.068 Sum_probs=58.2
Q ss_pred eEEEEec--CCcEEEEeCCCCeEEEEEccCCceeeEEE--ec----CCCeEEEEECCCCCEEEEecCCCcEEEEEeCCce
Q psy11518 16 SVRSVAA--TSKLAASSGADETVVLYDMVKRKQSGALM--QH----EGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQ 87 (139)
Q Consensus 16 ~v~~~~~--~~~~l~~~~~~~~v~i~~~~~~~~~~~~~--~~----~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 87 (139)
.+.++.. ++.+.+ |+.+| |..++..+.+.. .+. .. ...|.++...+++..+-.|... -+..+|..+++
T Consensus 147 ~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~-Gl~~~~~~~~~ 222 (758)
T 3ott_A 147 TIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG-YLFQYFPSTGQ 222 (758)
T ss_dssp CEEEEEECTTCCEEE-EETTE-EEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEEEEE-EEEEEETTTTE
T ss_pred eEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEEECC-CCeEEcCCCCe
Confidence 3555554 455444 44444 667787665432 111 11 1237778777666543334433 47788877665
Q ss_pred EEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCc
Q psy11518 88 LEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 88 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (139)
....... ....|.++....++.+.+ |+.+ -+.+++..+++
T Consensus 223 ~~~~~~l--~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~~~ 262 (758)
T 3ott_A 223 IKQTEAF--HNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDTTP 262 (758)
T ss_dssp EEEEEEE--EEEEEEEEEECTTCCEEE-EETT-EEEEECCTTSC
T ss_pred EEeccCC--CCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCCCc
Confidence 4332211 122378888777776544 4444 47778876644
No 374
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=30.42 E-value=65 Score=17.01 Aligned_cols=44 Identities=11% Similarity=0.181 Sum_probs=22.8
Q ss_pred EEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEE
Q psy11518 69 LISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLAL 114 (139)
Q Consensus 69 l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 114 (139)
.+.-..||.+.++|- .+..++......... ...+.+.++|.+++
T Consensus 54 ~l~l~~dGNLVl~~~-~~~~~W~S~t~~~~g-~~~l~l~~dGnlvl 97 (110)
T 3a0c_A 54 RLTLHNNGNLVIYDQ-SNRVIWQTKTNGKED-HYVLVLQQDRNVVI 97 (110)
T ss_dssp EEEECTTSCEEEECT-TCCEEEECCCCCSSS-CCEEEECTTSCEEE
T ss_pred EEEEeCCCCEEEECC-CCcEEEecCCCCCCC-CEEEEEeCCccEEE
Confidence 344456778888774 344444432222212 34566666666544
No 375
>2dk7_A Transcription elongation regulator 1; structural genomics, WW domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=30.02 E-value=57 Score=16.24 Aligned_cols=25 Identities=12% Similarity=0.011 Sum_probs=18.4
Q ss_pred CCcEEEEEcCCCeEEEEEcCCCcee
Q psy11518 109 SGKLALSVGKDKTLRTWNLVKGRSA 133 (139)
Q Consensus 109 ~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (139)
...++..-..||+++.||..+.+..
T Consensus 19 gt~W~~v~T~dGR~fyyN~~Tk~S~ 43 (73)
T 2dk7_A 19 GTPWCVVWTGDERVFFYNPTTRLSM 43 (73)
T ss_dssp SSSCEEEEESSSCEEEEETTTTEEC
T ss_pred CCCcEEEECCCCCEEEecCccccee
Confidence 4467777778888889988876544
No 376
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=29.76 E-value=1.7e+02 Score=21.51 Aligned_cols=69 Identities=7% Similarity=0.120 Sum_probs=42.2
Q ss_pred CeEEEEEC----CCC---CEEEEecCCCcEE-EEEeCCce-EEEEEEeCCCCcceeEEEEccCC--cEEEEEcCCCeEEE
Q psy11518 56 TITCLKFT----PEG---SHLISCSDDGSIA-IFRVGSWQ-LEKLFKKAHKGTAVNHISIHPSG--KLALSVGKDKTLRT 124 (139)
Q Consensus 56 ~v~~~~~~----~~~---~~l~~~~~d~~i~-~~d~~~~~-~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~d~~i~i 124 (139)
..+.++.. .++ ..+..|..+|.|. +....... .+..+.....+.+|..+.++++. ..|++++.++.+++
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 35666642 233 3567888888874 33443332 23333233334568899999987 88998888776554
No 377
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=29.54 E-value=88 Score=18.30 Aligned_cols=30 Identities=23% Similarity=0.277 Sum_probs=20.8
Q ss_pred eeEEEEccCCcEEEEEcCCCeEEEEEcCCC
Q psy11518 101 VNHISIHPSGKLALSVGKDKTLRTWNLVKG 130 (139)
Q Consensus 101 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (139)
+.-+.|.|++.+.+.+...|...=.|+..+
T Consensus 112 lEp~eF~p~~~w~a~~~esG~f~dvDLse~ 141 (164)
T 1zso_A 112 IELIDFFPSNNFIVEDTKGKLYYDVNLSDQ 141 (164)
T ss_dssp EEEEEECCCSCEEEEETTSCEEEEECCTTS
T ss_pred eeeEEEecCCcEEEEECCCCcEEeeecCCC
Confidence 444789999999998876664444566543
No 378
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=28.09 E-value=1.2e+02 Score=19.18 Aligned_cols=66 Identities=15% Similarity=0.136 Sum_probs=30.8
Q ss_pred CeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcCC
Q psy11518 56 TITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLVK 129 (139)
Q Consensus 56 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (139)
.|..++...... ++. .+|.+..|-....-.+. ..... ...|..++.......+++ ||.+..|-...
T Consensus 181 ~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gqlg-~p~~~-~~~v~~i~~G~~h~~al~---~g~v~~wG~n~ 246 (282)
T 3qhy_B 181 GVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQTT-VPTEA-LSGVSAIASGEWYSLALK---NGKVIAWGSSR 246 (282)
T ss_dssp SEEEEEECSSEE-EEE--ETTEEEEEECCTTSTTC-CCGGG-GSSCCEEEECSSCEEEEE---TTEEEEESTTC
T ss_pred CeEEEEecCCEE-EEE--ECCeEEEEECCCCCCCC-CCccc-CCCceEEEcCCCEEEEEE---CCEEEEecCCC
Confidence 455555433222 222 47777777653321110 00111 112666665544333333 88888886544
No 379
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=28.08 E-value=71 Score=16.89 Aligned_cols=18 Identities=6% Similarity=-0.031 Sum_probs=14.4
Q ss_pred CeEEEEEcCCCceeEEEe
Q psy11518 120 KTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 120 ~~i~i~d~~~~~~~~~~~ 137 (139)
-+|.|||+.+|.+..++-
T Consensus 17 E~V~IvNvnNG~RfeTYv 34 (97)
T 1uhe_A 17 MKVEIVDVNNGERFSTYV 34 (97)
T ss_dssp CEEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCceEEEEE
Confidence 468999999998887653
No 380
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=27.54 E-value=74 Score=16.79 Aligned_cols=18 Identities=6% Similarity=0.222 Sum_probs=14.4
Q ss_pred CeEEEEEcCCCceeEEEe
Q psy11518 120 KTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 120 ~~i~i~d~~~~~~~~~~~ 137 (139)
-+|.|||+.+|.+..++-
T Consensus 18 E~V~IvNvnNG~Rf~TYv 35 (96)
T 1vc3_B 18 EQVDIYDITNGARLTTYA 35 (96)
T ss_dssp CEEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCceEEEEE
Confidence 468999999998887653
No 381
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=27.38 E-value=1.8e+02 Score=21.18 Aligned_cols=103 Identities=12% Similarity=0.077 Sum_probs=57.3
Q ss_pred CCcEEEEeCCCCeEEEEEccCCceeeEEE-----ecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCceEEEEEEeCC-
Q psy11518 23 TSKLAASSGADETVVLYDMVKRKQSGALM-----QHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSWQLEKLFKKAH- 96 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~- 96 (139)
++. +-.++.+ -|..||..+++.. .+. .....|.++...+++.+.+.. .+| |..++..+....... ...
T Consensus 112 ~g~-lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~G-l~~~~~~~~~~~~~~-~~~~ 185 (758)
T 3ott_A 112 GDT-LWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGT-YNG-LCRYIPSNGKFEGIP-LPVH 185 (758)
T ss_dssp TTE-EEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEE-TTE-EEEEETTTTEEEEEC-CCCC
T ss_pred CCc-EEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEe-CCC-HhhCccCCCceEEec-CCCc
Confidence 443 3334444 4667777655422 221 112457788777778776643 344 777887666543221 111
Q ss_pred ---CCcceeEEEEccCCcEEEEEcCCCeEEEEEcCCCce
Q psy11518 97 ---KGTAVNHISIHPSGKLALSVGKDKTLRTWNLVKGRS 132 (139)
Q Consensus 97 ---~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (139)
....|.++...+++..|..|+. +-+..+|..+++.
T Consensus 186 ~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~ 223 (758)
T 3ott_A 186 SSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQI 223 (758)
T ss_dssp TTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEE
T ss_pred cccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeE
Confidence 1122777877776665555554 3577888877643
No 382
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=26.36 E-value=79 Score=16.89 Aligned_cols=18 Identities=11% Similarity=0.095 Sum_probs=14.4
Q ss_pred CeEEEEEcCCCceeEEEe
Q psy11518 120 KTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 120 ~~i~i~d~~~~~~~~~~~ 137 (139)
-+|.|||+.+|.+..++-
T Consensus 18 E~V~I~NvnNG~Rf~TYv 35 (102)
T 3plx_B 18 EKVQVVNVNNGARFETYT 35 (102)
T ss_dssp CEEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCcEEEEEE
Confidence 468999999998887653
No 383
>2z5e_A Proteasome assembling chaperone 3; beta sandwich, homodimer; 2.00A {Homo sapiens}
Probab=24.18 E-value=99 Score=17.05 Aligned_cols=31 Identities=16% Similarity=-0.025 Sum_probs=23.7
Q ss_pred EEEeecceeeEEEEecCCcEEEEeCCCCeEE
Q psy11518 7 TFVTHSHTASVRSVAATSKLAASSGADETVV 37 (139)
Q Consensus 7 ~~~~~~~~~~v~~~~~~~~~l~~~~~~~~v~ 37 (139)
.....|....+.+..|.++.+++.+..|.+-
T Consensus 13 s~~I~Gv~Tevv~~~FsD~ilV~VTQ~Gk~G 43 (122)
T 2z5e_A 13 TEVVCGVPTQVVCTAFSSHILVVVTQFGKMG 43 (122)
T ss_dssp EEEETTEEEEEEEEECSSEEEEEEESTTCCC
T ss_pred EEEECCeeeEEEEEecCCEEEEEEEeCCeee
Confidence 3445567778888999999999998887543
No 384
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=24.05 E-value=97 Score=16.91 Aligned_cols=19 Identities=16% Similarity=0.156 Sum_probs=15.0
Q ss_pred CCeEEEEEcCCCceeEEEe
Q psy11518 119 DKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 119 d~~i~i~d~~~~~~~~~~~ 137 (139)
--+|.|||+.+|.+..++-
T Consensus 44 ~E~V~I~NvnNG~Rf~TYv 62 (114)
T 3oug_A 44 NEKVQVVNLNNGERLETYV 62 (114)
T ss_dssp TBEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCCceEEEEE
Confidence 4579999999998877654
No 385
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=23.54 E-value=19 Score=24.82 Aligned_cols=16 Identities=25% Similarity=0.478 Sum_probs=9.1
Q ss_pred EeCCCCeEEEEEccCC
Q psy11518 29 SSGADETVVLYDMVKR 44 (139)
Q Consensus 29 ~~~~~~~v~i~~~~~~ 44 (139)
.+..+|.|++||++..
T Consensus 162 ~~~~~GVVrvWDVkd~ 177 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNA 177 (577)
T ss_dssp ----CCEECSEECSCG
T ss_pred CCCCCCeEEEEecCCH
Confidence 4556788888887654
No 386
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=22.98 E-value=2.2e+02 Score=20.64 Aligned_cols=55 Identities=9% Similarity=0.006 Sum_probs=33.8
Q ss_pred EEEEeCCCCeEEEEEccCCc----e--eeEEE--ecCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy11518 26 LAASSGADETVVLYDMVKRK----Q--SGALM--QHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 26 ~l~~~~~~~~v~i~~~~~~~----~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
.+..|+.+|.|+-.-..... . +.++. ....+|..+.++++...|..++.++.+++
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 56678888877643332211 1 12222 23467888999988888888877765554
No 387
>1nr3_A MTH0916, DNA-binding protein TFX; northeast structural genomics consortium, reduced- dimensionality PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: d.236.1.1
Probab=22.41 E-value=1e+02 Score=16.56 Aligned_cols=19 Identities=16% Similarity=0.337 Sum_probs=15.4
Q ss_pred CCcEEEEEcCCCeEEEEEcC
Q psy11518 109 SGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 109 ~~~~l~~~~~d~~i~i~d~~ 128 (139)
++..++....||.+++ |+.
T Consensus 103 ~~~~~i~v~~~g~~~~-~~~ 121 (122)
T 1nr3_A 103 KSDFEIGVTRDGEIIV-DLN 121 (122)
T ss_dssp SSCEEEEESSSSSEEE-ECC
T ss_pred cccEEEEEccCCcEEE-eCC
Confidence 5567888899999998 775
No 388
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=22.35 E-value=2.4e+02 Score=20.81 Aligned_cols=55 Identities=15% Similarity=0.179 Sum_probs=34.0
Q ss_pred EEEEeCCCCeEE-EEEccCCc-------eeeEEE--ecCCCeEEEEECCCCCEEEEecCCCcEEE
Q psy11518 26 LAASSGADETVV-LYDMVKRK-------QSGALM--QHEGTITCLKFTPEGSHLISCSDDGSIAI 80 (139)
Q Consensus 26 ~l~~~~~~~~v~-i~~~~~~~-------~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 80 (139)
.+..|+.+|.|. +....... .+.++. ....+|..+.++++...|..++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 466788888775 32221111 122222 24567889999999999998888776554
No 389
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=22.35 E-value=89 Score=18.80 Aligned_cols=32 Identities=16% Similarity=0.087 Sum_probs=21.3
Q ss_pred eeeEEEEec-C--CcEEEEeCCCCeEEEEEccCCc
Q psy11518 14 TASVRSVAA-T--SKLAASSGADETVVLYDMVKRK 45 (139)
Q Consensus 14 ~~~v~~~~~-~--~~~l~~~~~~~~v~i~~~~~~~ 45 (139)
...++.+.| + ..-+++...++++.++|++-|+
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 344555555 3 3356667788999999987664
No 390
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=22.22 E-value=1.6e+02 Score=18.65 Aligned_cols=104 Identities=10% Similarity=0.073 Sum_probs=61.7
Q ss_pred CCcEEEEeCCCCeEEEEEccCCc------eeeEEEecCCCeEEEEECCCCCEEEEecCCCcEEEEEeCCc-------eEE
Q psy11518 23 TSKLAASSGADETVVLYDMVKRK------QSGALMQHEGTITCLKFTPEGSHLISCSDDGSIAIFRVGSW-------QLE 89 (139)
Q Consensus 23 ~~~~l~~~~~~~~v~i~~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~-------~~~ 89 (139)
+...++..+.+|.++-....... ....++. ...+..+........++..+..|.+..+....- .-.
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv 157 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGV 157 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCE
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCE
Confidence 46788899999999988875532 1122332 334555555555567777888888887775321 111
Q ss_pred EEEEeCCCCcceeEEEEccCCcEEEEEcCCCeEEEEEcC
Q psy11518 90 KLFKKAHKGTAVNHISIHPSGKLALSVGKDKTLRTWNLV 128 (139)
Q Consensus 90 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (139)
..+.... +..|..+...+++..++..+..|.+....+.
T Consensus 158 ~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 158 QGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp ECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred EEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 1121222 2235555544556678888888887776653
No 391
>1ofz_A Fucose-specific lectin; sugar-binding protein, AAL, aleuria aurantia lectin; HET: FUL FUC; 1.5A {Aleuria aurantia} SCOP: b.68.8.1 PDB: 1iuc_A* 1iub_A*
Probab=21.79 E-value=1.7e+02 Score=19.03 Aligned_cols=71 Identities=15% Similarity=0.149 Sum_probs=33.2
Q ss_pred CCeEEEEECCCCCEEEEecCCCcEE--EEEeCCceEEEEEEeCCCCcceeEEEEccC-CcEEEEEcCCCeEEEE
Q psy11518 55 GTITCLKFTPEGSHLISCSDDGSIA--IFRVGSWQLEKLFKKAHKGTAVNHISIHPS-GKLALSVGKDKTLRTW 125 (139)
Q Consensus 55 ~~v~~~~~~~~~~~l~~~~~d~~i~--~~d~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~ 125 (139)
..+.++.|.++.-.+...+.|..|. .||-................++.++.|.++ .-.|+..+.++.|.-.
T Consensus 166 T~laa~s~~~~~i~vf~q~~dn~i~~~~~d~~~W~~~~~~~~~~p~s~lAavs~~~~~~i~lf~~~~~n~i~~~ 239 (312)
T 1ofz_A 166 TGIGATAIGPGRLRIYYQATDNKIREHCWDSNSWYVGGFSASASAGVSIAAISWGSTPNIRVYWQKGREELYEA 239 (312)
T ss_dssp CCEEEEEEETTEEEEEEEBTTSEEEEEEESSSCEEEEEEEEECCTTCEEEEEEETTTTEEEEEEECTTSCEEEE
T ss_pred CCcceeecCCCCEEEEEEcCCCcEEEEEecCCcceECCEecCcCCCCCcEEEEeCCCCEEEEEEECCCCcEEEE
Confidence 3466666655433334444566663 555433323222222233334777777443 3344444555554433
No 392
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=20.91 E-value=73 Score=18.17 Aligned_cols=19 Identities=16% Similarity=0.190 Sum_probs=15.6
Q ss_pred EEEEcCCCeEEEEEcCCCc
Q psy11518 113 ALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 113 l~~~~~d~~i~i~d~~~~~ 131 (139)
|++++.+|.|.+-|+|.-.
T Consensus 119 ivTaGG~g~VaF~D~R~l~ 137 (142)
T 2hrv_A 119 IVTAGGDNHVAFIDLRHFH 137 (142)
T ss_dssp EEEEECSSEEEEEEGGGGS
T ss_pred EEecCCCCEEEEEEchhhh
Confidence 6788999999999998643
No 393
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=20.84 E-value=1.2e+02 Score=17.30 Aligned_cols=19 Identities=16% Similarity=0.503 Sum_probs=15.3
Q ss_pred CCeEEEEEcCCCceeEEEe
Q psy11518 119 DKTLRTWNLVKGRSAYITN 137 (139)
Q Consensus 119 d~~i~i~d~~~~~~~~~~~ 137 (139)
--.|.|||+.+|....++-
T Consensus 58 ~EkV~IvNvnNG~RfeTYv 76 (143)
T 1pqh_A 58 NEAIDIWNVTNGKRFSTYA 76 (143)
T ss_dssp TCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCCceEEEEE
Confidence 4579999999999887654
No 394
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=20.53 E-value=1.1e+02 Score=17.99 Aligned_cols=19 Identities=5% Similarity=0.032 Sum_probs=16.0
Q ss_pred EEEEcCCCeEEEEEcCCCc
Q psy11518 113 ALSVGKDKTLRTWNLVKGR 131 (139)
Q Consensus 113 l~~~~~d~~i~i~d~~~~~ 131 (139)
|++++.+|.|.+=|+|.-.
T Consensus 139 ivTaGG~g~VaF~DiR~l~ 157 (166)
T 1z8r_A 139 LVTMGGEGVVGFADVRDLL 157 (166)
T ss_dssp EEEEECSSEEEEEESTTCC
T ss_pred EEecCCCCEEEEEEcchhh
Confidence 6789999999999998753
Done!