BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11523
(147 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P41695|BUB1_YEAST Checkpoint serine/threonine-protein kinase BUB1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=BUB1 PE=1
SV=2
Length = 1021
Score = 93.6 bits (231), Expect = 4e-19, Method: Composition-based stats.
Identities = 54/129 (41%), Positives = 71/129 (55%), Gaps = 10/129 (7%)
Query: 10 LIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTLLGKY 69
LIDFGRS DMTL PPGT F + D C EM+ G+ WSY D YGLAG + L GK+
Sbjct: 869 LIDFGRSFDMTLLPPGTKFKSNWKADQQDCWEMRAGKPWSYEADYYGLAGVIHSMLFGKF 928
Query: 70 MNTVK-RGARWILADTIPRYLRRDVMEPIFDKLLNS--------PSHYDITLLEDIIHS- 119
+ T++ + R L + RY ++++ IFD LLNS P I + ++I S
Sbjct: 929 IETIQLQNGRCKLKNPFKRYWKKEIWGVIFDLLLNSGQASNQALPMTEKIVEIRNLIESH 988
Query: 120 LEQELECSL 128
LEQ E L
Sbjct: 989 LEQHAENHL 997
>sp|O08901|BUB1_MOUSE Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Mus
musculus GN=Bub1 PE=2 SV=1
Length = 1058
Score = 90.5 bits (223), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 63/118 (53%)
Query: 8 LKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTLLG 67
L LID G+SIDM L+P GT F+ T GFQC EM + W+Y D +G+A ++ C L G
Sbjct: 915 LALIDLGQSIDMKLFPKGTVFTGKCETSGFQCPEMLSNKPWNYQIDYFGVAATIYCMLFG 974
Query: 68 KYMNTVKRGARWILADTIPRYLRRDVMEPIFDKLLNSPSHYDITLLEDIIHSLEQELE 125
YM G W R D+ E F +LN P +++ L+ + ++++ LE
Sbjct: 975 SYMKVKNEGGVWKPEGLFRRLPHLDMWEEFFHIMLNIPDCHNLPSLDFLRQNMKKLLE 1032
>sp|O43683|BUB1_HUMAN Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Homo
sapiens GN=BUB1 PE=1 SV=1
Length = 1085
Score = 81.6 bits (200), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 57/115 (49%)
Query: 8 LKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTLLG 67
L LID G+SIDM L+P GT F+ T GFQC EM + W+Y D +G+A ++ C L G
Sbjct: 942 LALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFG 1001
Query: 68 KYMNTVKRGARWILADTIPRYLRRDVMEPIFDKLLNSPSHYDITLLEDIIHSLEQ 122
YM G R D+ F +LN P + + L+ + L++
Sbjct: 1002 TYMKVKNEGGECKPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKK 1056
>sp|O94751|BUB1_SCHPO Checkpoint serine/threonine-protein kinase bub1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=bub1 PE=1 SV=1
Length = 1044
Score = 74.7 bits (182), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 10 LIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTLLGKY 69
LIDFGR ID++L+ F TD C EM+EGR W+Y D +GLA + L G+Y
Sbjct: 898 LIDFGRGIDLSLFEEKVKFIADWDTDLQDCIEMREGRPWTYQIDYHGLAAIIYTMLFGQY 957
Query: 70 MNT----VKRGARWILADTIPRYLRRDVMEPIFDKLLNSPSH 107
+ T + R +L + RY +D+ +FD LLN H
Sbjct: 958 IETRIEVINGQRRQVLTQRMKRYWNQDLWHRLFDLLLNPTLH 999
>sp|Q9M9C5|Y1680_ARATH Probable leucine-rich repeat receptor-like protein kinase At1g68400
OS=Arabidopsis thaliana GN=At1g68400 PE=2 SV=1
Length = 670
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 18/136 (13%)
Query: 2 RSGLPTLKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSM 61
RSG ++ DFG SI + P TV ++G++ E+ +GR+ + +DVY +
Sbjct: 501 RSG--NARVSDFGLSI----FAPS---QTVAKSNGYRAPELIDGRKHTQKSDVYSFGVLL 551
Query: 62 CCTLLGKYMNTVKRGARWILADTIPRYLRRDVME----PIFDKLLNSPSHYDITLLEDII 117
L GK N V+ G D +PR+++ V E +FD L + DI E+++
Sbjct: 552 LEILTGKCPNMVETGHSGGAVD-LPRWVQSVVREEWTAEVFD--LELMRYKDIE--EEMV 606
Query: 118 HSLEQELECSLARSDE 133
L+ + C+ +D
Sbjct: 607 GLLQIAMACTAVAADH 622
>sp|O60566|BUB1B_HUMAN Mitotic checkpoint serine/threonine-protein kinase BUB1 beta OS=Homo
sapiens GN=BUB1B PE=1 SV=3
Length = 1050
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 8 LKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREW------SYHTDVYGLAGSM 61
LK++DF S+D+ + V T GF+ ++ EG++ Y D++G+A
Sbjct: 907 LKIVDFSYSVDLRVQ------LDVFTLSGFRTVQILEGQKILANCSSPYQVDLFGIADLA 960
Query: 62 CCTLLGKYMNTVKRGARWILADTIPRYLRRDVMEPIFDKLLNSPSHYDITLLEDI 116
L +++ G+ W L+ I ++ F ++LN+ +++L ++
Sbjct: 961 HLLLFKEHLQVFWDGSFWKLSQNISELKDGELWNKFFVRILNANDEATVSVLGEL 1015
>sp|P32350|KNS1_YEAST Dual specificity protein kinase KNS1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=KNS1 PE=1 SV=2
Length = 737
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 6 PTLKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTL 65
P +K+IDFG +I Y P V++T ++ E+ G WS+ D++ +A + +
Sbjct: 484 PEIKIIDFGSAIFHYEYHP-----PVISTRHYRAPEIVLGLGWSFPCDIWSIACVLVELV 538
Query: 66 LGKYM----NTVKRGARWILADTIPRYLRRDVMEPIF----DKLLNSPSHYDITLLE 114
+G+ + ++ A + P D+++ +F KL NSPS + T+++
Sbjct: 539 IGESLYPIHENLEHMAMMQRINGTP--FPTDIIDKMFYKSKHKLGNSPSDLNSTVIK 593
>sp|Q58426|Y1020_METJA Uncharacterized protein MJ1020 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1020 PE=4 SV=1
Length = 259
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 25 GTTFSTVVTTDGFQCTEM--KEGREWSYHTDVYG-LAGSMCCTLLGKYMNTVKRGARWIL 81
G T + +V + + ++ K+G E S+ D G S+ TLLG Y++ + +
Sbjct: 51 GKTHAKIVANNAIKMLKILYKKGIEPSFVKDCKGSFEDSLVITLLGAYLHDIGNSVHRDI 110
Query: 82 ADTIPRYLRRDVMEPIFDKLLNSPSHYDITLLEDIIHSL 120
YL D++E I K Y +T +++H++
Sbjct: 111 HHLHSAYLALDIVENILKKYYKEEKAYQMTT--EVLHAI 147
>sp|P38991|IPL1_YEAST Spindle assembly checkpoint kinase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=IPL1 PE=1 SV=1
Length = 367
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 7 TLKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTLL 66
+KL DFG SI + PP TV T + EM E RE+ + D + L G + LL
Sbjct: 240 VIKLTDFGWSI---INPPENRRKTVCGTIDYLSPEMVESREYDHTIDAWAL-GVLAFELL 295
>sp|Q9Z1S0|BUB1B_MOUSE Mitotic checkpoint serine/threonine-protein kinase BUB1 beta OS=Mus
musculus GN=Bub1b PE=1 SV=2
Length = 1052
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 8 LKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREW------SYHTDVYGLAGSM 61
++++DF S+D+ + +S GF+ ++ EG++ YH D+ G+A
Sbjct: 897 VRIMDFSYSVDLRVQLDAFAYS------GFRTAQILEGQKILANCSSPYHVDLLGIADLA 950
Query: 62 CCTLLGKYMNTVKRGARWILADTIPRYLRRDVMEPIFDKLLNSPSHYDITLLEDI 116
L ++++ G W L+ + ++ F ++LN+ +++L ++
Sbjct: 951 HLLLFKEHLHVFWDGLLWKLSQSTSELKDSELWNKFFVRILNASDKSTVSVLGEL 1005
>sp|Q54VC0|Y9865_DICDI Probable serine/threonine-protein kinase DDB_G0280461
OS=Dictyostelium discoideum GN=DDB_G0280461 PE=3 SV=1
Length = 418
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 7 TLKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLA 58
T+K+ DFG + ++T+ P + T+ TD F E+ G ++SY D+Y
Sbjct: 152 TIKICDFGFAKEITIQNPLSM--TICGTDEFMSPEVILGIQYSYSADIYSFG 201
>sp|B8FUD2|THIC_DESHD Phosphomethylpyrimidine synthase OS=Desulfitobacterium hafniense
(strain DCB-2 / DSM 10664) GN=thiC PE=3 SV=1
Length = 432
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 67 GKYMNTVKRGARWILADTIPRYLRRDVMEPIFDKLLNSPSHYDITL 112
G+ M+ V RG +I A + + R++ + +D+LLN HYD+TL
Sbjct: 178 GRVMDIVSRGGSFITAWML-HHQRQNPLFEQYDRLLNIALHYDVTL 222
>sp|Q13163|MP2K5_HUMAN Dual specificity mitogen-activated protein kinase kinase 5 OS=Homo
sapiens GN=MAP2K5 PE=1 SV=2
Length = 448
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 8 LKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTLLG 67
+KL DFG S + + T V T+ + E G ++ H+DV+ L S LG
Sbjct: 297 VKLCDFGVSTQLV----NSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALG 352
Query: 68 KY 69
++
Sbjct: 353 RF 354
>sp|Q62862|MP2K5_RAT Dual specificity mitogen-activated protein kinase kinase 5
OS=Rattus norvegicus GN=Map2k5 PE=1 SV=1
Length = 448
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 8 LKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTLLG 67
+KL DFG S + + T V T+ + E G ++ H+DV+ L S LG
Sbjct: 297 VKLCDFGVSTQLV----NSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALG 352
Query: 68 KY 69
++
Sbjct: 353 RF 354
>sp|Q9WVS7|MP2K5_MOUSE Dual specificity mitogen-activated protein kinase kinase 5 OS=Mus
musculus GN=Map2k5 PE=1 SV=1
Length = 448
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 8 LKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTLLG 67
+KL DFG S + + T V T+ + E G ++ H+DV+ L S LG
Sbjct: 297 VKLCDFGVSTQLV----NSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALG 352
Query: 68 KY 69
++
Sbjct: 353 RF 354
>sp|P59241|AURKA_RAT Aurora kinase A OS=Rattus norvegicus GN=Aurka PE=1 SV=1
Length = 397
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 16/119 (13%)
Query: 8 LKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTLL- 66
LK+ DFG S+ + P + +T+ T +Q EM EGR D++ L G +C L
Sbjct: 263 LKIADFGWSV----HAPSSRRTTLCGTLDYQPPEMIEGRMHDEKVDLWSL-GVLCYEFLV 317
Query: 67 -------GKYMNTVKRGARWILADTIPRYLRRDVMEPIFDKLLNSPSHYDITLLEDIIH 118
Y T +R +R + T P ++ + + +LL S +TL E + H
Sbjct: 318 GMPPFEAHTYQETYRRISR--VEFTFPDFVTEGARD-LISRLLKHNSSQRLTLAEVLEH 373
>sp|P54735|SPKD_SYNY3 Serine/threonine-protein kinase D OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=spkD PE=1 SV=1
Length = 505
Score = 32.0 bits (71), Expect = 1.5, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 10 LIDFGRSID----MTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTL 65
LIDFG + +TL T S V+ T GF E GR + TD+Y L ++ TL
Sbjct: 153 LIDFGAVKETMGAVTLGSGSTVSSVVIGTRGFMAPEQSSGRS-VFSTDLYALGLTIIYTL 211
Query: 66 LGK 68
K
Sbjct: 212 TKK 214
>sp|Q8RXG3|M2K5_ARATH Mitogen-activated protein kinase kinase 5 OS=Arabidopsis thaliana
GN=MKK5 PE=1 SV=2
Length = 348
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Query: 7 TLKLIDFG--RSIDMTLYPPGTTFSTVVTTDGFQC-TEMKEGREWSYHTDVYGLAGSMCC 63
+K+ DFG R + T+ P ++ T+ + T++ GR Y DV+ L S+
Sbjct: 200 NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGRYDGYAGDVWSLGVSILE 259
Query: 64 TLLGKYMNTVKRGARW 79
LG++ V R W
Sbjct: 260 FYLGRFPFAVSRQGDW 275
>sp|Q8CDU6|HECD2_MOUSE Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus
GN=Hectd2 PE=2 SV=2
Length = 774
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 89 LRRDVMEPIFDKLLNSPSHYDITLLEDIIHSLEQELECSLARSD 132
L +++ +FD LLN+P ++L+ II+SL QE + + D
Sbjct: 183 LNANLVNAVFDALLNTPQDIQKSVLKGIINSLLQEWKGPRTKDD 226
>sp|P08810|ENV_SIVM2 Envelope glycoprotein gp160 OS=Simian immunodeficiency virus
(isolate Mm251) GN=env PE=1 SV=2
Length = 881
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 6/48 (12%)
Query: 48 WSY-HTDVYGLAGSMCCTLLGKYMN---TVKRGARWILADTIPRYLRR 91
WSY H V S TL G + + T++RG RWILA IPR +R+
Sbjct: 829 WSYFHEAVQAGWRSATETLAGAWRDLWETLRRGGRWILA--IPRRIRQ 874
>sp|Q23551|UNC22_CAEEL Twitchin OS=Caenorhabditis elegans GN=unc-22 PE=1 SV=3
Length = 7158
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Query: 8 LKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLA 58
LKLIDFG + + P + T F E+ EG+ Y+TD++ +
Sbjct: 6398 LKLIDFGLTAHLD---PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVG 6445
>sp|Q755C4|IPL1_ASHGO Spindle assembly checkpoint kinase OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=IPL1
PE=3 SV=1
Length = 367
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 7 TLKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLA 58
T+KL DFG S+ + P G+ T+ T + E+ RE++ DV+ L
Sbjct: 245 TIKLTDFGWSV---ITPKGSKRKTLCGTVDYLSPELIRSREYNEKVDVWALG 293
>sp|A3DDC9|SYY_CLOTH Tyrosine--tRNA ligase OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=tyrS PE=3 SV=1
Length = 408
Score = 30.0 bits (66), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 36 GFQCTEMKEGREWSYHTDVYGLAGSMCCTLLGKYMNTVKRGARWILADTIPRY 88
G KEG+E VYG+ ++ T GK M ++GA W+ A+ Y
Sbjct: 201 GIDLIRRKEGKE------VYGMTFTLLTTSEGKKMGKTEKGALWLDANKTSPY 247
>sp|Q54TW0|PKS18_DICDI Probable polyketide synthase 18 OS=Dictyostelium discoideum
GN=pks18 PE=2 SV=1
Length = 2999
Score = 30.0 bits (66), Expect = 5.5, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 32 VTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTLLGKY 69
V T+ Q ++K+ +S + +G+ GS CC +L +Y
Sbjct: 419 VVTEPIQFKDVKKSNNFSMILNNFGITGSNCCLILSQY 456
>sp|Q54IX3|PKS26_DICDI Probable polyketide synthase 26 OS=Dictyostelium discoideum GN=pks26
PE=3 SV=1
Length = 2531
Score = 29.6 bits (65), Expect = 6.7, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 88 YLRRDVMEPIFDKLLNSPSHYDITLLEDIIHSLEQ 122
Y D+ E + +K L PS+YD ++ +++H +++
Sbjct: 1464 YRSLDLEESLIEKQLLKPSYYDFVIMSNVLHVIKE 1498
>sp|Q559A9|PKS13_DICDI Probable polyketide synthase 13 OS=Dictyostelium discoideum GN=pks13
PE=3 SV=1
Length = 2551
Score = 29.6 bits (65), Expect = 7.4, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 88 YLRRDVMEPIFDKLLNSPSHYDITLLEDIIHSLEQ 122
Y D+ +P +K SPS+YD ++ +++H +++
Sbjct: 1492 YRSIDIEQPFIEKQDLSPSYYDFVIMSNVLHVVKK 1526
>sp|C0LGP9|IMK3_ARATH Probable leucine-rich repeat receptor-like protein kinase IMK3
OS=Arabidopsis thaliana GN=IMK3 PE=1 SV=1
Length = 784
Score = 29.6 bits (65), Expect = 7.4, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 7 TLKLIDFGRSIDMTLYPPGTTFSTVVTTDGFQCTEMKEGREWSYHTDVYGLAGSMCCTLL 66
T K+ D+G S MT G++ G++ E+ + ++ + TDVY L + L
Sbjct: 625 TAKISDYGLSRLMTA-AAGSSVIATAGALGYRAPELSKLKKANTKTDVYSLGVIILELLT 683
Query: 67 GKYMNTVKRGARWILADTIPRYLRRDVMEPIFD-KLLNSPSHYDITLLEDIIHSLEQELE 125
GK + G L + ++ + +FD +LLN + T+ ++I+++L+ L
Sbjct: 684 GKSPSEALNGVD--LPQWVATAVKEEWTNEVFDLELLNDVN----TMGDEILNTLKLALH 737
Query: 126 C 126
C
Sbjct: 738 C 738
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.418
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,575,361
Number of Sequences: 539616
Number of extensions: 2309603
Number of successful extensions: 5263
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 5246
Number of HSP's gapped (non-prelim): 33
length of query: 147
length of database: 191,569,459
effective HSP length: 106
effective length of query: 41
effective length of database: 134,370,163
effective search space: 5509176683
effective search space used: 5509176683
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)