BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11524
(323 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9P2H3|IFT80_HUMAN Intraflagellar transport protein 80 homolog OS=Homo sapiens
GN=IFT80 PE=1 SV=3
Length = 777
Score = 212 bits (539), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 95/145 (65%), Positives = 116/145 (80%), Gaps = 3/145 (2%)
Query: 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVAWCSSTDLILSGGE 142
PVYS AW PDS KVL T K L+IKPL PN K +W+AHDG+ILKV W S DLILS GE
Sbjct: 149 PVYSVAWGPDSEKVLYTAGKQLIIKPLQPNAKVLQWKAHDGIILKVDWNSVNDLILSAGE 208
Query: 143 DCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHSLD 202
DCKYK VWD+ GR LY+S H+HPI+S+AWAP G++FAVGS++TLRLCDK GWS++L+
Sbjct: 209 DCKYK---VWDSYGRPLYNSQPHEHPITSVAWAPDGELFAVGSFHTLRLCDKTGWSYALE 265
Query: 203 KPDTGSVYDLVWSNDATQIAGACAN 227
KP+TGS++++ WS D TQIAGAC N
Sbjct: 266 KPNTGSIFNIAWSIDGTQIAGACGN 290
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 119 QAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGG 178
+AH G +L W +++ GED + K +W G + P+ S+AW P
Sbjct: 103 EAHCGAVLAGRWNYEGTALVTVGEDGQIK---IWSKTGMLRSTLAQQGTPVYSVAWGPDS 159
Query: 179 D--MFAVGSYNTLRLCDK----VGWSHSLDKPDTGSVYDLVWS--NDATQIAGACANVIH 230
+ ++ G ++ + W K G + + W+ ND AG
Sbjct: 160 EKVLYTAGKQLIIKPLQPNAKVLQW-----KAHDGIILKVDWNSVNDLILSAGEDCK--- 211
Query: 231 IFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSLDKPD 290
+ + S + H H IT +A G L V R + WS++L+KP+
Sbjct: 212 -YKVWDSYGRPLYNSQPHEHPITSVAWAPDGEL--FAVGSFHTLRLCDKTGWSYALEKPN 268
Query: 291 TGSVYDLVWSSDATQIAGACANGSLLLGTIIQR 323
TGS++++ WS D TQIAGAC NG ++ ++++
Sbjct: 269 TGSIFNIAWSIDGTQIAGACGNGHVVFAHVVEQ 301
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 20 DYLELLSYPEVLRFVKNHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCR 76
D E P ++ FV N +TIRR DG++++ I+PY ++LH Y +S W A+ LCR
Sbjct: 553 DASEFSKNPHIVSFVGNQVTIRRADGSLVHISITPYPAILHEYVSSSKWEDAVRLCR 609
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 215 SNDATQIA-GACANVIHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDK 273
SND I A +I +F+ S+ LSH +EI ++A++Q G +R +AFIDK
Sbjct: 425 SNDTIAIRDKADEKIIFLFEASTGKPLGDGKFLSHKNEILEIALDQKGLTNDRKIAFIDK 484
Query: 274 NRDLYLS 280
NRDL ++
Sbjct: 485 NRDLCIT 491
>sp|Q66HB3|IFT80_RAT Intraflagellar transport protein 80 homolog OS=Rattus norvegicus
GN=Ift80 PE=2 SV=1
Length = 777
Score = 211 bits (538), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 95/145 (65%), Positives = 115/145 (79%), Gaps = 3/145 (2%)
Query: 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVAWCSSTDLILSGGE 142
PVYS AW PDS KVL T K L+IKPL PN K +W+AHDG+ILKV W S DLILS GE
Sbjct: 149 PVYSVAWGPDSEKVLYTAGKQLIIKPLQPNAKVLQWKAHDGIILKVDWNSVNDLILSAGE 208
Query: 143 DCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHSLD 202
DCKYK VWD+ GR LY S H+HPI+S+AWAP G++FAVGS++TLRLCDK GWS++L+
Sbjct: 209 DCKYK---VWDSYGRVLYGSQPHEHPITSVAWAPDGELFAVGSFHTLRLCDKTGWSYALE 265
Query: 203 KPDTGSVYDLVWSNDATQIAGACAN 227
KP+TGS++++ WS D TQIAGAC N
Sbjct: 266 KPNTGSIFNIAWSIDGTQIAGACGN 290
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 96/214 (44%), Gaps = 24/214 (11%)
Query: 119 QAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDH-PISSLAWAPG 177
+AH G +L W +++ GED + K +W G L S+L P+ S+AW P
Sbjct: 103 EAHCGAVLAGRWNYEGTALVTVGEDGQVK---IWSKTG-MLRSTLAQQGIPVYSVAWGPD 158
Query: 178 GD--MFAVGSYNTLRLCDK----VGWSHSLDKPDTGSVYDLVWS--NDATQIAGACANVI 229
+ ++ G ++ + W K G + + W+ ND AG
Sbjct: 159 SEKVLYTAGKQLIIKPLQPNAKVLQW-----KAHDGIILKVDWNSVNDLILSAGEDCK-- 211
Query: 230 HIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSLDKP 289
+ + S + H H IT +A G L V R + WS++L+KP
Sbjct: 212 --YKVWDSYGRVLYGSQPHEHPITSVAWAPDGEL--FAVGSFHTLRLCDKTGWSYALEKP 267
Query: 290 DTGSVYDLVWSSDATQIAGACANGSLLLGTIIQR 323
+TGS++++ WS D TQIAGAC NG ++ ++++
Sbjct: 268 NTGSIFNIAWSIDGTQIAGACGNGHVVFAHVVEQ 301
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 28 PEVLRFVKNHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCR 76
P ++ FV N +T+RR DG++++ ISPY ++LH Y +S W A+ LCR
Sbjct: 561 PHIVSFVGNQVTVRRADGSLVHISISPYPAILHEYVSSSKWEDAVRLCR 609
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 215 SNDATQIA-GACANVIHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDK 273
SND I A +I +F+ S+ LSH +EI+++A++Q G +R +AFIDK
Sbjct: 425 SNDTIAIKDKADEKIIFLFEASTGKPLGDGKLLSHKNEISEVALDQKGLTNDRKIAFIDK 484
Query: 274 NRDLYLS 280
NRDLY++
Sbjct: 485 NRDLYIT 491
>sp|Q8K057|IFT80_MOUSE Intraflagellar transport protein 80 homolog OS=Mus musculus
GN=Ift80 PE=2 SV=1
Length = 777
Score = 211 bits (537), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 95/145 (65%), Positives = 115/145 (79%), Gaps = 3/145 (2%)
Query: 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVAWCSSTDLILSGGE 142
PVYS AW PDS KVL T K L+IKPL PN K +W+AHDG+ILKV W S DLILS GE
Sbjct: 149 PVYSVAWGPDSEKVLYTAGKQLIIKPLQPNAKVLQWKAHDGIILKVDWNSVNDLILSAGE 208
Query: 143 DCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHSLD 202
DCKYK VWD+ GR LY S H+HPI+S+AWAP G++FAVGS++TLRLCDK GWS++L+
Sbjct: 209 DCKYK---VWDSYGRVLYGSQPHEHPITSVAWAPDGELFAVGSFHTLRLCDKTGWSYALE 265
Query: 203 KPDTGSVYDLVWSNDATQIAGACAN 227
KP+TGS++++ WS D TQIAGAC N
Sbjct: 266 KPNTGSIFNIAWSIDGTQIAGACGN 290
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 22/213 (10%)
Query: 119 QAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGG 178
+AH G +L W +++ GED + K +W G + P+ S+AW P
Sbjct: 103 EAHCGAVLAGRWNYEGTALVTVGEDGQVK---IWSKTGMLRSTLAQQGTPVYSVAWGPDS 159
Query: 179 D--MFAVGSYNTLRLCDK----VGWSHSLDKPDTGSVYDLVWS--NDATQIAGACANVIH 230
+ ++ G ++ + W K G + + W+ ND AG
Sbjct: 160 EKVLYTAGKQLIIKPLQPNAKVLQW-----KAHDGIILKVDWNSVNDLILSAGEDCK--- 211
Query: 231 IFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSLDKPD 290
+ + S + H H IT +A G L V R + WS++L+KP+
Sbjct: 212 -YKVWDSYGRVLYGSQPHEHPITSVAWAPDGELFA--VGSFHTLRLCDKTGWSYALEKPN 268
Query: 291 TGSVYDLVWSSDATQIAGACANGSLLLGTIIQR 323
TGS++++ WS D TQIAGAC NG ++ ++++
Sbjct: 269 TGSIFNIAWSIDGTQIAGACGNGHVVFAHVVEQ 301
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 28 PEVLRFVKNHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCR 76
P ++ FV N +TIRR DG++++ ISPY ++LH Y +S W +A+ LCR
Sbjct: 561 PHIVSFVGNQVTIRRADGSLVHISISPYPAILHEYVSSSKWEEAVRLCR 609
Score = 53.1 bits (126), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 215 SNDATQIA-GACANVIHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDK 273
SND I A +I +F+ S+ LSH +EI+++A++Q G +R +AFIDK
Sbjct: 425 SNDTIAIKDKADEKIIFLFEASTGKPLGDGKLLSHKNEISEIALDQKGLTNDRKIAFIDK 484
Query: 274 NRDLYLS 280
NRDLY++
Sbjct: 485 NRDLYIT 491
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase PkwA OS=Thermomonospora
curvata GN=pkwA PE=3 SV=1
Length = 742
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 13/223 (5%)
Query: 46 TVINYPISPYISVLHSYAASHSWPQALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLV 105
T+ P+ P S S +A P L+ R L + A+SP + + L+
Sbjct: 427 TLPETPLRPDSSTAPSESAD---PHELNEPRILTTDREAVAVAFSPGGSLLAGGSGDKLI 483
Query: 106 -IKPLSPNNKATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLT 164
+ ++ ++ + H + VA+ L+ SG +D + V + R ++
Sbjct: 484 HVWDVASGDELHTLEGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEG-- 541
Query: 165 HDHPISSLAWAPGGDMFAVGSYN-TLRLCD-KVGWSHSLDKPDTGSVYDLVWSNDATQIA 222
H H + +A++P G M A GS + T RL + G H++ K T VY + +S D + +A
Sbjct: 542 HTHYVLDIAFSPDGSMVASGSRDGTARLWNVATGTEHAVLKGHTDYVYAVAFSPDGSMVA 601
Query: 223 -GACANVIHIFDISSSSSSNV-TAPLSHSHEITQLAVNQTGSL 263
G+ I ++D+++ +V AP + + LA + GS+
Sbjct: 602 SGSRDGTIRLWDVATGKERDVLQAP---AENVVSLAFSPDGSM 641
>sp|P20053|PRP4_YEAST U4/U6 small nuclear ribonucleoprotein PRP4 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=PRP4 PE=1
SV=1
Length = 465
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 32/234 (13%)
Query: 51 PISPY-ISVLHSYAASHSWPQALSLCRTLNVSP----------PVYSAAWSPDSNKVLLT 99
PIS +S A+ SW L + + + P + + W PDSN +++
Sbjct: 177 PISAVSLSTDDMVVATGSWAGDLQVLNSQTLQPLTQKLDSHVGKIGAIDWHPDSNNQMIS 236
Query: 100 QAKSLVIKPLSPNNKATKWQ------AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWD 153
A+ +IK +N+ + H+ I V + S I S D ++ +WD
Sbjct: 237 CAEDGLIKNFQYSNEEGGLRLLGDLVGHERRISDVKYHPSGKFIGSASHDMTWR---LWD 293
Query: 154 TDGRQ-LYSSLTHDHPISSLAWAPGGDMFAVGSYNTL------RLCDKVGWSHSLDKPDT 206
Q L HD + SL++ G + G ++L R KV KP
Sbjct: 294 ASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSMLWDIRSGSKVMTLAGHSKP-- 351
Query: 207 GSVYDLVWSNDATQIA-GACANVIHIFDISSSSSSNVTAPLSHSHEITQLAVNQ 259
+Y + WS + Q+A G +I+++DI + L+H + +TQ+ ++
Sbjct: 352 --IYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSK 403
>sp|Q8BQM8|EMAL5_MOUSE Echinoderm microtubule-associated protein-like 5 OS=Mus musculus
GN=Eml5 PE=2 SV=2
Length = 1977
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 68 WPQALSLCR-----TLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAH- 121
W Q L CR T V+ V S K+L+ S +I+ + N A +
Sbjct: 1643 WDQELRRCRAFRLETGQVTDCVRSVCRG--KGKILVGTRNSEIIE-VGEKNAACNILVNG 1699
Query: 122 --DGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGD 179
DG I +A S D LS ED + +WD +++ + + H ++ ++P GD
Sbjct: 1700 HVDGPIWGLATHPSRDFFLSAAEDGTVR---LWDIADKKMLNKVNLGHAARTVCYSPEGD 1756
Query: 180 MFAVGSYN----TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIA-GACANVIHIFDI 234
M A+G N L + W D+ +++D+ +S D+ +A G+ N + +D+
Sbjct: 1757 MVAIGMKNGEFIILLVSSLKIWGKKRDR--RCAIHDIRFSPDSRYLAVGSSENSVDFYDL 1814
Query: 235 SSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHV 268
+ + N +S+ +I + S RH+
Sbjct: 1815 TLGPTLN---RISYCKDIPSFVIQMDFSADSRHL 1845
>sp|Q6ED65|EMAL5_RAT Echinoderm microtubule-associated protein-like 5 OS=Rattus norvegicus
GN=Eml5 PE=1 SV=2
Length = 1977
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 24/214 (11%)
Query: 68 WPQALSLCR-----TLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAH- 121
W Q L CR T V+ V S K+L+ S +I+ + N A +
Sbjct: 1643 WDQELRRCRAFRLETGQVTDCVRSVCRG--KGKILVGTRNSEIIE-VGEKNAACNILVNG 1699
Query: 122 --DGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGD 179
DG I +A S D LS ED + +WD +++ + + H ++ ++P GD
Sbjct: 1700 HVDGPIWGLATHPSRDFFLSAAEDGTVR---LWDIADKKMLNKVNLGHAARTVCYSPEGD 1756
Query: 180 MFAVGSYN----TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIA-GACANVIHIFDI 234
M A+G N L + W D+ +++D+ +S D+ +A G+ N + +D+
Sbjct: 1757 MVAIGMKNGEFIILLVSSLKIWGKKRDR--RCAIHDIRFSPDSRYLAVGSSENSVDFYDL 1814
Query: 235 SSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHV 268
+ + N +S+ +I + S RH+
Sbjct: 1815 TLGPTLN---RISYCKDIPSFVIQMDFSADSRHL 1845
>sp|A1D3F5|ERB1_NEOFI Ribosome biogenesis protein ERB1 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=erb1
PE=3 SV=1
Length = 790
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 70 QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVA 129
+ C L ++P V + + D +L +KP P AT ++ H G + +A
Sbjct: 379 EKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPF-PTACATVFRGHKGRVRTLA 437
Query: 130 WCSSTDLILSGGEDCKYKASFVWD-TDGRQLYS-SLTHDHPISSLAWAPGGDMFAVGS 185
S L+ +GG+D + VW+ GRQL+S L+ + P++ + W PG D + +
Sbjct: 438 VDPSGLLLATGGDDGTVR---VWELLTGRQLWSVKLSEEDPVNVVRWRPGKDALILAA 492
>sp|C4YFX2|TUP1_CANAW Transcriptional repressor TUP1 OS=Candida albicans (strain WO-1)
GN=TUP1 PE=4 SV=1
Length = 511
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 18/178 (10%)
Query: 84 VYSAAWSPDSNKVLLTQAKSLVIK--PLSPNNKATKWQAHDGLILKVAWCSSTDLILSGG 141
+ S +SPD K+L T A+ +I+ LS + H+ I + + D ++SG
Sbjct: 257 IRSVCFSPDG-KLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGS 315
Query: 142 EDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHS 200
D ++ +WD Q +L+ + ++++A +P G + A GS + T+R+ D
Sbjct: 316 GD---RSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTT-GFL 371
Query: 201 LDKPDTG---------SVYDLVWSNDATQIA-GACANVIHIFDISSSSSSNVTAPLSH 248
+++ D+G SVY + +SN+ QIA G+ + ++ + S T +++
Sbjct: 372 VERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTY 429
>sp|P0CY34|TUP1_CANAL Transcriptional repressor TUP1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=TUP1 PE=1 SV=1
Length = 512
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 85/178 (47%), Gaps = 18/178 (10%)
Query: 84 VYSAAWSPDSNKVLLTQAKSLVIK--PLSPNNKATKWQAHDGLILKVAWCSSTDLILSGG 141
+ S +SPD K+L T A+ +I+ LS + H+ I + + D ++SG
Sbjct: 258 IRSVCFSPDG-KLLATGAEDKLIRIWDLSTKRIIKILRGHEQDIYSLDFFPDGDRLVSGS 316
Query: 142 EDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHS 200
D ++ +WD Q +L+ + ++++A +P G + A GS + T+R+ D
Sbjct: 317 GD---RSVRIWDLRTSQCSLTLSIEDGVTTVAVSPDGKLIAAGSLDRTVRVWDSTT-GFL 372
Query: 201 LDKPDTG---------SVYDLVWSNDATQIA-GACANVIHIFDISSSSSSNVTAPLSH 248
+++ D+G SVY + +SN+ QIA G+ + ++ + S T +++
Sbjct: 373 VERLDSGNENGNGHEDSVYSVAFSNNGEQIASGSLDRTVKLWHLEGKSDKKSTCEVTY 430
>sp|O88656|ARC1B_RAT Actin-related protein 2/3 complex subunit 1B OS=Rattus norvegicus
GN=Arpc1b PE=2 SV=3
Length = 372
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 16/163 (9%)
Query: 83 PVYSAAWSPDSNKVLLTQAKSLV---IKPLSPNNKATKWQAHDGLILKVAWCSSTDLILS 139
P+ AW+ D ++ + V K + NK + + H+G + + W ++ I++
Sbjct: 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWNKVHELKEHNGQVTGIDWAPESNRIVT 69
Query: 140 GGEDCKYKASFVWDTDGRQLYSSLT---HDHPISSLAWAPGGDMFAVGS-YNTLRLC--- 192
G D + ++VW GR +L + + WAP + FAVGS + +C
Sbjct: 70 CGTD---RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFE 126
Query: 193 DKVGW--SHSLDKPDTGSVYDLVW-SNDATQIAGACANVIHIF 232
+ W + KP +V L W N+ AG+C IF
Sbjct: 127 QENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIF 169
>sp|Q9WV32|ARC1B_MOUSE Actin-related protein 2/3 complex subunit 1B OS=Mus musculus
GN=Arpc1b PE=1 SV=4
Length = 372
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 16/163 (9%)
Query: 83 PVYSAAWSPDSNKVLLTQAKSLV---IKPLSPNNKATKWQAHDGLILKVAWCSSTDLILS 139
P+ AW+ D ++ + V K + NK + + H+G + + W ++ I++
Sbjct: 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWNKVHELKEHNGQVTGIDWAPESNRIVT 69
Query: 140 GGEDCKYKASFVWDTDGRQLYSSLT---HDHPISSLAWAPGGDMFAVGS-YNTLRLC--- 192
G D + ++VW GR +L + + WAP + FAVGS + +C
Sbjct: 70 CGTD---RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFE 126
Query: 193 DKVGW--SHSLDKPDTGSVYDLVW-SNDATQIAGACANVIHIF 232
+ W + KP +V L W N+ AG+C IF
Sbjct: 127 QENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIF 169
>sp|Q38942|RAE1L_ARATH Rae1-like protein At1g80670 OS=Arabidopsis thaliana GN=At1g80670
PE=2 SV=2
Length = 349
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 120 AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDT-DGRQLYSSLTHDHPISSLAWAPGG 178
+HD +L AW + SGG D K + +W G Q + H+ PI+++AW PG
Sbjct: 70 SHDQPVLCSAWKDDGTTVFSGGCD---KQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGM 126
Query: 179 DMFAVGSYN-TLRLCDKVGWS--HSLDKPDTGSVYDLVWSNDATQIAGACANVIHIFDIS 235
++ A GS++ TL+ D + H+ PD Y L + + A N+I +F++
Sbjct: 127 NLLATGSWDKTLKYWDTRQQNPVHTQQLPD--KCYTLSVKHPLMVVGTADRNLI-VFNLQ 183
Query: 236 SSSSS--NVTAPLSHSHEITQLAVNQTGSL 263
+ + + +PL + +Q G L
Sbjct: 184 NPQTEFKRIQSPLKYQTRCVTAFPDQQGFL 213
>sp|Q229Z6|POC1_TETTS POC1 centriolar protein homolog OS=Tetrahymena thermophila (strain
SB210) GN=TTHERM_01308010 PE=3 SV=1
Length = 634
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 4/99 (4%)
Query: 104 LVIKPLSPNNKATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWD-TDGRQLYSS 162
+ I + N + AHD + ++ + + S G D K K +WD GRQ+Y+
Sbjct: 254 IKITDIRSNKLIQHYNAHDAQVNSISIHPTGYFLASAGSDSKIK---IWDLRQGRQIYTL 310
Query: 163 LTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHSL 201
++D I+++ + GD FA G L + K + ++
Sbjct: 311 YSNDKDITTVQFNQSGDYFATGGSQNLCMVWKTNFDQNI 349
>sp|Q7SEM3|ERB1_NEUCR Ribosome biogenesis protein erb-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=erb-1 PE=3 SV=1
Length = 779
Score = 42.0 bits (97), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 70 QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVA 129
+ C L ++P V + D N +L +KP P T ++ HDG + VA
Sbjct: 381 ERFERCMDLYLAPRVRKNRLNIDPNSLLPKLPSPSELKPF-PTVAQTVFRGHDGRVRSVA 439
Query: 130 WCSSTDLILSGGEDCKYKASFVWD-TDGRQLYS-SLTHDHPISSLAWAPGGDMF----AV 183
+ + SGG+D + VW+ GRQ++S L+ + ++++ W P D F AV
Sbjct: 440 IDPTGVAVASGGDDGTVR---VWELLTGRQVWSVKLSSEEAVNTVRWRPAKDSFILSAAV 496
Query: 184 GS 185
G
Sbjct: 497 GE 498
>sp|Q4WTI3|ERB1_ASPFU Ribosome biogenesis protein erb1 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=erb1
PE=3 SV=1
Length = 795
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 70 QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVA 129
+ C L ++P V + + D +L +KP P AT ++ H G + +A
Sbjct: 384 EKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPF-PTACATVFRGHKGRVRTLA 442
Query: 130 WCSSTDLILSGGEDCKYKASFVWDT-DGRQLYS-SLTHDHPISSLAWAPGGDMFAVGS 185
S + SGG+D + VW+ GRQL+S L+ + P++ + W PG D + +
Sbjct: 443 VDPSGLWLASGGDDGTVR---VWELLTGRQLWSVKLSEEDPVNVVRWRPGKDALILAA 497
>sp|B0XQ42|ERB1_ASPFC Ribosome biogenesis protein erb1 OS=Neosartorya fumigata (strain
CEA10 / CBS 144.89 / FGSC A1163) GN=erb1 PE=3 SV=1
Length = 796
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 70 QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVA 129
+ C L ++P V + + D +L +KP P AT ++ H G + +A
Sbjct: 385 EKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPF-PTACATVFRGHKGRVRTLA 443
Query: 130 WCSSTDLILSGGEDCKYKASFVWDT-DGRQLYS-SLTHDHPISSLAWAPGGDMFAVGS 185
S + SGG+D + VW+ GRQL+S L+ + P++ + W PG D + +
Sbjct: 444 VDPSGLWLASGGDDGTVR---VWELLTGRQLWSVKLSEEDPVNVVRWRPGKDALILAA 498
>sp|Q05BV3|EMAL5_HUMAN Echinoderm microtubule-associated protein-like 5 OS=Homo sapiens
GN=EML5 PE=2 SV=3
Length = 1969
Score = 41.6 bits (96), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 79/185 (42%), Gaps = 17/185 (9%)
Query: 68 WPQALSLCRTLNVSPPVYS---AAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAH--- 121
W Q L CR + + + K+L+ + +I+ + N A +
Sbjct: 1635 WDQELRRCRAFRLETGQATDCVRSVCRGKGKILVGTRNAEIIE-VGEKNAACNILVNGHV 1693
Query: 122 DGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMF 181
DG I +A S D LS ED + +WD +++ + + H ++ ++P GDM
Sbjct: 1694 DGPIWGLATHPSRDFFLSAAEDGTVR---LWDIADKKMLNKVNLGHAARTVCYSPEGDMV 1750
Query: 182 AVGSYN----TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIA-GACANVIHIFDISS 236
A+G N L + W D+ +++D+ +S D+ +A G+ N + +D++
Sbjct: 1751 AIGMKNGEFIILLVSSLKIWGKKRDR--RCAIHDIRFSPDSRYLAVGSSENSVDFYDLTL 1808
Query: 237 SSSSN 241
+ N
Sbjct: 1809 GPTLN 1813
>sp|Q2HDW0|ERB1_CHAGB Ribosome biogenesis protein ERB1 OS=Chaetomium globosum (strain
ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL
1970) GN=ERB1 PE=3 SV=1
Length = 782
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 70 QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVA 129
+ C L ++P + + D N +L +KP P T ++ H+G + V+
Sbjct: 384 ERFERCMDLYLAPRIRKNRLNIDPNSLLPKLPSPSELKPF-PTVAQTIFRGHEGRVRSVS 442
Query: 130 WCSSTDLILSGGEDCKYKASFVWDT-DGRQLYS-SLTHDHPISSLAWAPGGDMFAVGS 185
+ + +GG+D + VW+ GRQ++S L + P++++ W P D F + +
Sbjct: 443 VDPTGVALATGGDDGTVR---VWELLTGRQVWSVKLNSEEPVNAVRWRPTKDAFVLAA 497
>sp|A6QX61|ERB1_AJECN Ribosome biogenesis protein ERB1 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=ERB1 PE=3 SV=2
Length = 788
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 13/164 (7%)
Query: 70 QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVA 129
+ C L ++P V + + D +L +KP P+ AT ++ H G + +A
Sbjct: 384 EKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPF-PSTCATLFRGHSGRVRTLA 442
Query: 130 WCSSTDLILSGGEDCKYKASFVWD-TDGRQLYS-SLTHDHPISSLAWAPGGD--MFAVGS 185
+ + SGG+D + VW+ GRQ++S L+ + P++ + W P D + A +
Sbjct: 443 IDPTGVWLASGGDDGTVR---VWELLTGRQIWSVKLSDEEPVNVIRWRPSKDAVVLAAAT 499
Query: 186 YNTLRLC-----DKVGWSHSLDKPDTGSVYDLVWSNDATQIAGA 224
+++ L D SLD D G Y ++D+T+ A
Sbjct: 500 GDSIHLIVPPILDPEMEKASLDIVDAGWGYAKTLTSDSTKKTSA 543
>sp|Q5NVK4|COR1B_PONAB Coronin-1B OS=Pongo abelii GN=CORO1B PE=2 SV=2
Length = 489
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 87/233 (37%), Gaps = 48/233 (20%)
Query: 103 SLVIKPLSPNNKATKWQ----AHDGLILKVAWCSSTD-LILSGGEDCKYKASFVWDTDGR 157
+ ++ PLS + K H G +L + WC D +I SG EDC VW
Sbjct: 59 AFLVLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTV---MVWQIPEN 115
Query: 158 QLYSSLT--------HDHPISSLAWAPGGD--MFAVGSYNTLRLCDKVGWSHSLDKPDT- 206
L S LT H + +AW P + + G N + L VG + L + D+
Sbjct: 116 GLTSPLTEPVVVLEGHTKRVGIIAWHPTARNVLLSAGCDNVV-LIWNVGTAEELYRLDSL 174
Query: 207 --GSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHE---------ITQ 254
+Y++ W+ + + AC + + I D + A +HE +
Sbjct: 175 HPDLIYNVSWNRNGSLFCSACKDKSVRIID---PRQGTLVAEREKAHEGARPMRAIFLAD 231
Query: 255 LAVNQTG--SLQERHVAFIDKNRDLYLSMWSHSLDK----------PDTGSVY 295
V TG + ER +A D +L M LD PDT VY
Sbjct: 232 GKVFTTGFSRMSERQLALWDPE-NLEEPMALQELDSSNGALLPFYDPDTSVVY 283
>sp|Q2UPK0|ERB1_ASPOR Ribosome biogenesis protein erb1 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=erb1 PE=3 SV=1
Length = 783
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 70 QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVA 129
+ C L ++P V + + D +L +KP P AT ++ H G + +A
Sbjct: 372 EKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPF-PTACATVFRGHKGRVRTLA 430
Query: 130 WCSSTDLILSGGEDCKYKASFVWDT-DGRQLYS-SLTHDHPISSLAWAPGGD 179
S + +GG+D + VW+ GRQL+S L+ + P++ + W PG D
Sbjct: 431 VDPSGLWLATGGDDGTAR---VWELLTGRQLWSVKLSEEDPVNVVRWRPGKD 479
>sp|O15143|ARC1B_HUMAN Actin-related protein 2/3 complex subunit 1B OS=Homo sapiens
GN=ARPC1B PE=1 SV=3
Length = 372
Score = 40.4 bits (93), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 68/163 (41%), Gaps = 16/163 (9%)
Query: 83 PVYSAAWSPDSNKVLLTQAKSLV---IKPLSPNNKATKWQAHDGLILKVAWCSSTDLILS 139
P+ AW+ D ++ + V K + K + + H+G + + W ++ I++
Sbjct: 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVT 69
Query: 140 GGEDCKYKASFVWDTDGRQLYSSLTH---DHPISSLAWAPGGDMFAVGS-YNTLRLC--- 192
G D + ++VW GR +L + + WAP + FAVGS + +C
Sbjct: 70 CGTD---RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRVISICYFE 126
Query: 193 DKVGW--SHSLDKPDTGSVYDLVW-SNDATQIAGACANVIHIF 232
+ W + KP +V L W N+ AG+C IF
Sbjct: 127 QENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIF 169
>sp|Q9BR76|COR1B_HUMAN Coronin-1B OS=Homo sapiens GN=CORO1B PE=1 SV=1
Length = 489
Score = 40.4 bits (93), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 88/233 (37%), Gaps = 48/233 (20%)
Query: 103 SLVIKPLSPNNKATKWQ----AHDGLILKVAWCSSTD-LILSGGEDCKYKASFVWDTDGR 157
+ ++ PLS + K H G +L + WC D +I SG EDC VW
Sbjct: 59 AFLVLPLSKTGRIDKAYPTVCGHTGPVLDIDWCPHNDEVIASGSEDCTV---MVWQIPEN 115
Query: 158 QLYSSLT--------HDHPISSLAWAPGGD--MFAVGSYNTLRLCDKVGWSHSLDKPDT- 206
L S LT H + +AW P + + G N + L VG + L + D+
Sbjct: 116 GLTSPLTEPVVVLEGHTKRVGIIAWHPTARNVLLSAGCDNVV-LIWNVGTAEELYRLDSL 174
Query: 207 --GSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHE---------ITQ 254
+Y++ W+++ + AC + + I D + A +HE +
Sbjct: 175 HPDLIYNVSWNHNGSLFCSACKDKSVRIID---PRRGTLVAEREKAHEGARPMRAIFLAD 231
Query: 255 LAVNQTG--SLQERHVAFIDKNRDLYLSMWSHSLDK----------PDTGSVY 295
V TG + ER +A D +L M LD PDT VY
Sbjct: 232 GKVFTTGFSRMSERQLALWDPE-NLEEPMALQELDSSNGALLPFYDPDTSVVY 283
>sp|Q9R0Q6|ARC1A_MOUSE Actin-related protein 2/3 complex subunit 1A OS=Mus musculus
GN=Arpc1a PE=1 SV=1
Length = 370
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 83 PVYSAAWSPDSNKVLLTQAKSLV---IKPLSPNNKATKWQAHDGLILKVAWCSSTDLILS 139
P+ AW+ D ++ L+ V K S KA + + H+G I + W +D I++
Sbjct: 10 PITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWTKAHELKEHNGHITGIDWAPKSDRIVT 69
Query: 140 GGEDCKYKASFVW-DTDG--RQLYSSLTHDHPISSLAWAPGGDMFAVGSYNTL-RLC--- 192
G D + ++VW DG + L + + + W+P + FAVGS L +C
Sbjct: 70 CGAD---RNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFE 126
Query: 193 DKVGW--SHSLDKPDTGSVYDLVWS-NDATQIAGACANVIHIF 232
+ W S + KP +V L W N+ AG+C +F
Sbjct: 127 SENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVF 169
>sp|P74442|Y143_SYNY3 Uncharacterized WD repeat-containing protein slr0143
OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=slr0143 PE=4 SV=1
Length = 1191
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 20/208 (9%)
Query: 117 KWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAP 176
++ H G I +V + + + + G+D K +WD DG L + H + S++++P
Sbjct: 596 EFTGHTGSIYRVDFSPNGKIFATAGQDQTVK---IWDLDGNLLQTLKGHQDSVYSVSFSP 652
Query: 177 GGDMFAVGSYN-TLRLCD-KVGWSHSLDKPDTGSVYDLVWSNDATQIAGACAN-VIHIFD 233
G++ A S + T+RL + G + ++ T SV D +S D + C + I ++D
Sbjct: 653 DGEILASTSRDRTVRLWHWRSGKTLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWD 712
Query: 234 ISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSLDKPDTGS 293
+ + P E+ VN + VA D + +W+ + T S
Sbjct: 713 LDGNLIRQFGLP-----EVAFFGVNWHPNGNLLAVAADDGT----VRLWTPQGEIKATLS 763
Query: 294 VYD-----LVWSSDATQIAGACANGSLL 316
+D +V++ D Q+ + +NGS++
Sbjct: 764 GHDEFVTRVVFTPDGKQLFSSSSNGSVI 791
>sp|Q99PD4|ARC1A_RAT Actin-related protein 2/3 complex subunit 1A OS=Rattus norvegicus
GN=Arpc1a PE=2 SV=1
Length = 370
Score = 40.0 bits (92), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 16/163 (9%)
Query: 83 PVYSAAWSPDSNKVLLTQAKSLV---IKPLSPNNKATKWQAHDGLILKVAWCSSTDLILS 139
P+ AW+ D ++ L+ V K S KA + + H+G I + W +D I++
Sbjct: 10 PITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWTKAHELKEHNGHITGIDWAPKSDRIVT 69
Query: 140 GGEDCKYKASFVW-DTDG--RQLYSSLTHDHPISSLAWAPGGDMFAVGSYNTL-RLC--- 192
G D + ++VW DG + L + + + W+P + FAVGS L +C
Sbjct: 70 CGAD---RNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFE 126
Query: 193 DKVGW--SHSLDKPDTGSVYDLVWS-NDATQIAGACANVIHIF 232
+ W S + KP +V L W N+ AG+C +F
Sbjct: 127 SENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVF 169
>sp|Q5BDL3|ERB1_EMENI Ribosome biogenesis protein erb1 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=erb1 PE=3 SV=2
Length = 793
Score = 39.7 bits (91), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 6/112 (5%)
Query: 70 QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVA 129
+ C L ++P V + + D +L +KP P A ++ H G + +A
Sbjct: 382 EKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPF-PTACAAVFRGHKGRVRSLA 440
Query: 130 WCSSTDLILSGGEDCKYKASFVWD-TDGRQLYS-SLTHDHPISSLAWAPGGD 179
+ + +GG+D + VW+ GRQL+S L D P++ + W PG D
Sbjct: 441 VDPTGIWLATGGDDGTVR---VWELITGRQLWSVKLGEDEPVNVVRWRPGKD 489
>sp|Q92747|ARC1A_HUMAN Actin-related protein 2/3 complex subunit 1A OS=Homo sapiens
GN=ARPC1A PE=1 SV=2
Length = 370
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 38/174 (21%)
Query: 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNN--------------KATKWQAHDGLILKV 128
P+ AW+ D ++ LSPNN KA + + H+G I +
Sbjct: 10 PITCHAWNRDRTQI-----------ALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGI 58
Query: 129 AWCSSTDLILSGGEDCKYKASFVW-DTDG--RQLYSSLTHDHPISSLAWAPGGDMFAVGS 185
W +D I++ G D + ++VW DG + L + + + W+P + FAVGS
Sbjct: 59 DWAPKSDRIVTCGAD---RNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGS 115
Query: 186 YNTL-RLC---DKVGW--SHSLDKPDTGSVYDLVWS-NDATQIAGACANVIHIF 232
L +C + W S + KP +V L W N+ AG+C +F
Sbjct: 116 GARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVF 169
>sp|Q1JP79|ARC1A_BOVIN Actin-related protein 2/3 complex subunit 1A OS=Bos taurus
GN=ARPC1A PE=2 SV=1
Length = 370
Score = 39.3 bits (90), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 38/174 (21%)
Query: 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNN--------------KATKWQAHDGLILKV 128
P+ AW+ D ++ LSPNN KA + + H+G I +
Sbjct: 10 PITCHAWNRDRTQI-----------ALSPNNHEVHIYKKNGGQWVKAHELKEHNGHITGI 58
Query: 129 AWCSSTDLILSGGEDCKYKASFVW-DTDG--RQLYSSLTHDHPISSLAWAPGGDMFAVGS 185
W +D I++ G D + ++VW DG + L + + + W+P + FAVGS
Sbjct: 59 DWAPKSDRIVTCGAD---RNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGS 115
Query: 186 YNTL-RLC---DKVGW--SHSLDKPDTGSVYDLVWS-NDATQIAGACANVIHIF 232
L +C + W S + KP +V L W N+ AG+C +F
Sbjct: 116 GARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVF 169
>sp|Q1HPW4|EIF3I_BOMMO Eukaryotic translation initiation factor 3 subunit I OS=Bombyx mori
PE=2 SV=1
Length = 329
Score = 38.9 bits (89), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 73 SLCRTLNVSPPVYSAAWSPDSN-----KVLLTQAKSLVIKPLSPNNKATKWQAHDGLILK 127
S RT N S Y AA++ D +V + ++ + + +S KW+ D +
Sbjct: 94 SSVRTCNFSYSAYQAAYTTDKAMGHPCEVFVIDTRT-IDETVSGQAPILKWEITDSKVTS 152
Query: 128 VAWCSSTDLILSGGEDCKYKASFVWD-TDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSY 186
+ W S + I++G E WD G++++S H H I+ + + G MF S
Sbjct: 153 MIWGSLDETIITGHEAGDL---IQWDLRTGKKIHSVKEHTHQITDMQLSRDGTMFVTASK 209
Query: 187 N-TLRLCD 193
+ T +L D
Sbjct: 210 DHTAKLFD 217
>sp|A1CQI9|ERB1_ASPCL Ribosome biogenesis protein erb1 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=erb1 PE=3 SV=1
Length = 788
Score = 38.9 bits (89), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 70 QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVA 129
+ C L ++P V + + D +L +KP P AT ++ H G + +A
Sbjct: 377 EKFERCLDLYLAPRVRRSKLNIDPESLLPKLPSPEELKPF-PTACATVFRGHKGRVRSLA 435
Query: 130 WCSSTDLILSGGEDCKYKASFVWDT-DGRQLYS-SLTHDHPISSLAWAPGGDMFAVGS 185
S + + G+D + VW+ GRQL+S L+ + P++ + W PG D + +
Sbjct: 436 VDPSGLWLATAGDDGTVR---VWELLTGRQLWSVKLSEEDPVNVVRWRPGKDALILAA 490
>sp|Q28I85|POC1A_XENTR POC1 centriolar protein homolog A OS=Xenopus tropicalis GN=poc1a
PE=2 SV=1
Length = 441
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 71/172 (41%), Gaps = 23/172 (13%)
Query: 118 WQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDT-DGRQLYSSLTHDHPISSLAWAP 176
+Q H G++ +++ S + +++ D K V D +GR LY+ H P++S+ ++
Sbjct: 224 YQVHSGVVNSLSFHPSGNYLITASNDSTLK---VLDLLEGRLLYTLHGHQGPVTSVKFSR 280
Query: 177 GGDMFAVGSYNTLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANVIHIFDISS 236
G+ FA G + + K + D+ S DL+ Q
Sbjct: 281 EGEFFASGGSDEQVMVWKTNF-------DSASYADLLKYRQHDQFLNG-----------G 322
Query: 237 SSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSLDK 288
+S V A H E +Q L+ RH+ K+R LS S S+D+
Sbjct: 323 DYTSGVPAADRHRPE-RNAQTDQADDLEPRHIQMSAKDRSSPLSYTSRSIDQ 373
>sp|Q58CQ2|ARC1B_BOVIN Actin-related protein 2/3 complex subunit 1B OS=Bos taurus
GN=ARPC1B PE=1 SV=4
Length = 372
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 67/163 (41%), Gaps = 16/163 (9%)
Query: 83 PVYSAAWSPDSNKVLLTQAKSLV-IKPLSPNN--KATKWQAHDGLILKVAWCSSTDLILS 139
P+ AW+ D ++ + V I S N + + + H+G + + W ++ I++
Sbjct: 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGIDWAPDSNRIVT 69
Query: 140 GGEDCKYKASFVWDTDGRQLYSSLTH---DHPISSLAWAPGGDMFAVGS-YNTLRLC--- 192
G D + ++VW GR +L + + WAP FAVGS + +C
Sbjct: 70 CGTD---RNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFE 126
Query: 193 DKVGW--SHSLDKPDTGSVYDLVW-SNDATQIAGACANVIHIF 232
+ W + KP +V L W N AG+C IF
Sbjct: 127 QENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIF 169
>sp|Q9XS70|COR1B_RABIT Coronin-1B OS=Oryctolagus cuniculus GN=CORO1B PE=1 SV=1
Length = 486
Score = 38.5 bits (88), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 86/233 (36%), Gaps = 48/233 (20%)
Query: 103 SLVIKPLSPNNKATKWQ----AHDGLILKVAWCSSTD-LILSGGEDCKYKASFVWDTDGR 157
+ ++ PLS + K H G +L + WC D +I SG EDC VW
Sbjct: 59 AFLVLPLSKTGRIDKAYPTVCGHTGPVLDIEWCPHNDGVIASGSEDCTV---MVWQIPED 115
Query: 158 QLYSSLT--------HDHPISSLAWAPGGD--MFAVGSYNTLRLCDKVGWSHSLDKPDT- 206
L S LT H + + W P + + G N + L VG + L + D+
Sbjct: 116 GLTSPLTEPVVVLEGHTKRVGIVTWHPTARNVLLSAGCDNVV-LIWNVGTAEELYRLDSL 174
Query: 207 --GSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHE---------ITQ 254
+Y++ W+ + + AC + + I D + A +HE +
Sbjct: 175 HPDLIYNVSWNRNGSLFCSACKDKSVRIID---PRRGTLVAEREKAHEGARPMRAIFLAD 231
Query: 255 LAVNQTG--SLQERHVAFIDKNRDLYLSMWSHSLDK----------PDTGSVY 295
V TG + ER +A D +L M LD PDT VY
Sbjct: 232 GKVFTTGFSRMSERQLALWDPE-NLEEPMALQELDSSNGALLPFYDPDTSVVY 283
>sp|Q9BQ87|TBL1Y_HUMAN F-box-like/WD repeat-containing protein TBL1Y OS=Homo sapiens
GN=TBL1Y PE=2 SV=1
Length = 522
Score = 38.1 bits (87), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 19/130 (14%)
Query: 111 PNNKATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG-----------RQL 159
P NKAT + H+ + AW +DL+ SG D + +W+ + R
Sbjct: 168 PPNKATVLRGHESEVFICAWNPVSDLLASGSGDSTAR---IWNLNENSNGGSTQLVLRHC 224
Query: 160 YSSLTHDHP----ISSLAWAPGGDMFAVGSYNTL-RLCDKVGWSHSLDKPDTGSVYDLVW 214
HD P ++SL W G + A+GSY+ R+ + G S G ++ L W
Sbjct: 225 IREGGHDVPSNKDVTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKW 284
Query: 215 SNDATQIAGA 224
+ + A
Sbjct: 285 NKKGNYVLSA 294
>sp|Q7ZWF0|RAE1L_DANRE mRNA export factor OS=Danio rerio GN=rae1 PE=2 SV=2
Length = 368
Score = 38.1 bits (87), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 9/142 (6%)
Query: 119 QAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAW--AP 176
Q H G +L V W + + D K + +WD + Q H+ PI ++ W AP
Sbjct: 83 QMHTGPVLDVCWSDDGSKVFTASCD---KTAKMWDLNSNQAIQIAQHEGPIRTIHWIKAP 139
Query: 177 GGDMFAVGSYN-TLRLCDKVGWS--HSLDKPDTGSVYDLVWSNDATQIAGACANVIHIFD 233
GS++ TL+ D + SL P+ D+V+ A +++ +
Sbjct: 140 NYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERCYCADVVYPMAVVATAER-GLIVYQLE 198
Query: 234 ISSSSSSNVTAPLSHSHEITQL 255
S + +PL H H +
Sbjct: 199 NQPSEFRRIESPLKHQHRCVAI 220
>sp|O14775|GBB5_HUMAN Guanine nucleotide-binding protein subunit beta-5 OS=Homo sapiens
GN=GNB5 PE=1 SV=2
Length = 395
Score = 38.1 bits (87), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 122 DGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSL-THDHPISSLAWAPGGDM 180
D L L +A + + +SGG D K + VWD Q + TH+ I+S+ + P GD
Sbjct: 239 DVLCLDLAPSETGNTFVSGGCD---KKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDA 295
Query: 181 FAVGSYN-TLRLCD 193
FA GS + T RL D
Sbjct: 296 FASGSDDATCRLYD 309
>sp|Q5RDY7|GBB5_PONAB Guanine nucleotide-binding protein subunit beta-5 OS=Pongo abelii
GN=GNB5 PE=2 SV=1
Length = 353
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 122 DGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSL-THDHPISSLAWAPGGDM 180
D L L +A + + +SGG D K + VWD Q + TH+ I+S+ + P GD
Sbjct: 197 DVLCLDLAPSETGNTFVSGGCD---KKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDA 253
Query: 181 FAVGSYN-TLRLCD 193
FA GS + T RL D
Sbjct: 254 FASGSDDATCRLYD 267
>sp|Q8YV57|Y2124_NOSS1 Uncharacterized WD repeat-containing protein all2124 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=all2124 PE=4 SV=1
Length = 1683
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 25/215 (11%)
Query: 118 WQAHDGLILK----------VAWCSSTDLILSGGEDCKYKASFVWDT-DGRQLYSSLTHD 166
W + DG +LK +++ DLI S D K +W DG+ L + + HD
Sbjct: 1390 WHSQDGSLLKTLPGNKAIYGISFTPQGDLIASANADKTVK---IWRVRDGKALKTLIGHD 1446
Query: 167 HPISSLAWAPGGDMFAVGSY-NTLRLCD-KVGWSHSLDKPDTGSVYDLVWSNDATQIAGA 224
+ ++ + ++P G A S NT++L + G K T V+ + +S D IA A
Sbjct: 1447 NEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASA 1506
Query: 225 CAN-VIHIFDISSSSSSNVTAPL-SHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMW 282
A+ I ++D S S N+ L +H+ + + N GS+ A DK L+ S
Sbjct: 1507 SADKTIRLWD---SFSGNLIKSLPAHNDLVYSVNFNPDGSMLASTSA--DKTVKLWRSHD 1561
Query: 283 SHSLDKPDTGS--VYDLVWSSDATQIAGACANGSL 315
H L S VY +S D IA A + ++
Sbjct: 1562 GHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTV 1596
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 53/132 (40%), Gaps = 28/132 (21%)
Query: 68 WPQALSLCRTLNV-SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATK-WQAHDGLI 125
W + L RTLN VYS ++SPD + ++K K WQ DG +
Sbjct: 1099 WSRDGRLFRTLNGHEDAVYSVSFSPDGQTI-----------ASGGSDKTIKLWQTSDGTL 1147
Query: 126 LK-----------VAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLT-HDHPISSLA 173
LK V + + S D K +WDT QL +LT H + ++
Sbjct: 1148 LKTITGHEQTVNNVYFSPDGKNLASASSDHSIK---LWDTTSGQLLMTLTGHSAGVITVR 1204
Query: 174 WAPGGDMFAVGS 185
++P G A GS
Sbjct: 1205 FSPDGQTIAAGS 1216
Score = 31.6 bits (70), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 24/116 (20%)
Query: 84 VYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLIL-------KVAWCSSTD- 135
VYS ++PD + + T A V W++HDG +L V + SS
Sbjct: 1533 VYSVNFNPDGSMLASTSADKTV----------KLWRSHDGHLLHTFSGHSNVVYSSSFSP 1582
Query: 136 ---LILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYNT 188
I S ED K +W DG L + H + S ++P G GS +T
Sbjct: 1583 DGRYIASASEDKTVK---IWQIDGHLLTTLPQHQAGVMSAIFSPDGKTLISGSLDT 1635
>sp|Q80ZD0|GBB5_TAMST Guanine nucleotide-binding protein subunit beta-5 OS=Tamias
striatus GN=GNB5 PE=2 SV=1
Length = 353
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 122 DGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSL-THDHPISSLAWAPGGDM 180
D L L +A + + +SGG D K + VWD Q + TH+ I+S+ + P GD
Sbjct: 197 DVLCLDLAPSETGNTFVSGGCD---KKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDA 253
Query: 181 FAVGSYN-TLRLCD 193
FA GS + T RL D
Sbjct: 254 FASGSDDATCRLYD 267
>sp|Q20636|GBB2_CAEEL Guanine nucleotide-binding protein subunit beta-2 OS=Caenorhabditis
elegans GN=gpb-2 PE=1 SV=2
Length = 356
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 122 DGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLT-HDHPISSLAWAPGGDM 180
D + V C + + +S G D K S VWD Q S H+ I+++ + P GD
Sbjct: 200 DVFAIDVPKCDTGNTFISAGAD---KHSLVWDIRSGQCVQSFEGHEADINTVRFHPNGDA 256
Query: 181 FAVGSYN-TLRLCD 193
FA GS + T RL D
Sbjct: 257 FATGSDDATCRLFD 270
>sp|P91341|PWP2_CAEEL Periodic tryptophan protein 2 homolog OS=Caenorhabditis elegans
GN=F55F8.3 PE=3 SV=2
Length = 910
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 24/154 (15%)
Query: 77 TLNVSPPVYSAAWSPDSNKVLLTQAKSLVI---------KPLSPNNKATKWQAHDGLILK 127
T + P+ S WSPD+ +V + + L I K +P + + ++ +
Sbjct: 92 TFRSNKPIGSLQWSPDATRVAICRENDLQIHEFGKSIENKVYNPFSLSRTYKLSSDSLKT 151
Query: 128 VAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN 187
+ W +L++SGGED + V D + L+ HP++S F SY+
Sbjct: 152 IDWSDDANLLVSGGEDRVVRV--VGAKDFKNLFI-----HPLASHKGYIVNCQFMKNSYD 204
Query: 188 TLRLCDKVG----WSHSLDKPDTGSVYDLVWSND 217
+ +C K G W+ +L +P G + + +W D
Sbjct: 205 MITVC-KRGLANVWTCNL-RP--GELVEGIWKKD 234
>sp|Q6PNB6|GBB5_RABIT Guanine nucleotide-binding protein subunit beta-5 OS=Oryctolagus
cuniculus GN=GNB5 PE=2 SV=1
Length = 353
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 122 DGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSL-THDHPISSLAWAPGGDM 180
D L L +A + + +SGG D K + VWD Q + TH+ I+S+ + P GD
Sbjct: 197 DVLCLDLAPSETGNTFVSGGCD---KKAMVWDMRSGQCVQAFETHESDINSVRYYPSGDA 253
Query: 181 FAVGSYN-TLRLCD 193
FA GS + T RL D
Sbjct: 254 FASGSDDATCRLYD 267
>sp|Q5DFU0|CIAO1_SCHJA Probable cytosolic iron-sulfur protein assembly protein
OS=Schistosoma japonicum PE=2 SV=1
Length = 352
Score = 37.7 bits (86), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 119 QAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLT----HDHPISSLAW 174
+ H + VAWC S LI + G D K+ ++W+ D + ++ H + S+AW
Sbjct: 105 EGHTSEVKCVAWCPSGHLIATCGRD---KSVWLWEFDDEEDVQCVSVLQPHSQDVKSVAW 161
Query: 175 APGGDMFAVGSYN 187
P G++ SY+
Sbjct: 162 HPHGEVLVSTSYD 174
>sp|Q9WUM3|COR1B_MOUSE Coronin-1B OS=Mus musculus GN=Coro1b PE=1 SV=1
Length = 484
Score = 37.7 bits (86), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 79/212 (37%), Gaps = 44/212 (20%)
Query: 120 AHDGLILKVAWCSSTD-LILSGGEDCKYKASFVWDTDGRQLYSSLT--------HDHPIS 170
H G +L + WC D +I SG EDC VW L S LT H +
Sbjct: 80 GHTGPVLDIDWCPHNDEVIASGSEDCTV---MVWQIPENGLTSPLTEPVVVLEGHTKRVG 136
Query: 171 SLAWAPGGD--MFAVGSYNTLRLCDKVGWSHSLDKPDT---GSVYDLVWSNDATQIAGAC 225
+ W P + + G N + L VG + L + D+ +Y++ W+++ + AC
Sbjct: 137 IITWHPTARNVLLSAGCDNVV-LIWNVGTAEELYRLDSLHPDLIYNVSWNHNGSLFCSAC 195
Query: 226 ANV-IHIFDISSSSSSNVTAPLSHSHE---------ITQLAVNQTG--SLQERHVAFIDK 273
+ + I D + A +HE + V TG + ER +A D
Sbjct: 196 KDKSVRIID---PRRGTLVAEREKAHEGARPMRAIFLADGKVFTTGFSRMSERQLALWDP 252
Query: 274 NRDLYLSMWSHSLDK----------PDTGSVY 295
+L M LD PDT VY
Sbjct: 253 E-NLEEPMALQELDSSNGALLPFYDPDTSVVY 283
>sp|Q4R8H1|TBL1X_MACFA F-box-like/WD repeat-containing protein TBL1X OS=Macaca
fascicularis GN=TBL1X PE=2 SV=1
Length = 569
Score = 37.4 bits (85), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 19/130 (14%)
Query: 111 PNNKATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG-----------RQL 159
P++KAT + H+ + AW +DL+ SG D + +W+ + R
Sbjct: 213 PSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTAR---IWNLNENSNGGSTQLVLRHC 269
Query: 160 YSSLTHDHP----ISSLAWAPGGDMFAVGSYNTL-RLCDKVGWSHSLDKPDTGSVYDLVW 214
HD P ++SL W G + A GSY+ R+ + G S G ++ L W
Sbjct: 270 IREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKW 329
Query: 215 SNDATQIAGA 224
+ I A
Sbjct: 330 NRKGNYILSA 339
>sp|P62881|GBB5_MOUSE Guanine nucleotide-binding protein subunit beta-5 OS=Mus musculus
GN=Gnb5 PE=1 SV=1
Length = 395
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 122 DGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSL-THDHPISSLAWAPGGDM 180
D L L +A + + +SGG D K + VWD Q + TH+ ++S+ + P GD
Sbjct: 239 DVLCLDLAPSETGNTFVSGGCD---KKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDA 295
Query: 181 FAVGSYN-TLRLCD 193
FA GS + T RL D
Sbjct: 296 FASGSDDATCRLYD 309
>sp|A8IZG4|CIAO1_CHLRE Probable cytosolic iron-sulfur protein assembly protein CIAO1
homolog OS=Chlamydomonas reinhardtii
GN=CHLREDRAFT_130093 PE=3 SV=1
Length = 352
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 60/125 (48%), Gaps = 14/125 (11%)
Query: 165 HDHPISSLAWAPGGDMFAVGSYN-TLRLCDK------VGW--SHSLDKPDTGSVYDLVWS 215
HD + ++AW+P GDM A S + T+R+ + W S LD+ T ++ + WS
Sbjct: 15 HDDRVWNVAWSPQGDMLASCSGDKTVRIWSRRQPRPSEQWYCSAILDQCHTRTIRSVAWS 74
Query: 216 NDATQIAGACAN-VIHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKN 274
+A A + + ++++SS V H +E+ +A N G L +A ++
Sbjct: 75 PTGRALATASFDATVAVWELSSGVWEQVAELEGHENEVKCVAWNPDGRL----IATCGRD 130
Query: 275 RDLYL 279
R +++
Sbjct: 131 RSVWI 135
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 84 VYSAAWSPDSNKVLLTQA--KSLVIKPLSPN--NKATKWQAHDGLILKVAWCSSTDLILS 139
+ S AWSP + + L T + ++ + LS + + + H+ + VAW LI +
Sbjct: 68 IRSVAWSP-TGRALATASFDATVAVWELSSGVWEQVAELEGHENEVKCVAWNPDGRLIAT 126
Query: 140 GGEDCKYKASFVWDT-DGRQLYS---SLTHDHPISSLAWAPGGDMFAVGSY-NTLRLC-- 192
G D ++ ++W++ GR+ H + ++ W P G++ Y +T++L
Sbjct: 127 CGRD---RSVWIWESMPGREFECVDVKQGHSQDVKAVTWHPSGELLVSAGYDDTIKLWTY 183
Query: 193 --DKVGWSHSLDKPDTG---SVYDLVW 214
D+ G + +L TG +V+D+ W
Sbjct: 184 DGDEWGCAQTLGGTGTGHESTVWDVCW 210
>sp|O60907|TBL1X_HUMAN F-box-like/WD repeat-containing protein TBL1X OS=Homo sapiens
GN=TBL1X PE=1 SV=3
Length = 577
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 19/130 (14%)
Query: 111 PNNKATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG-----------RQL 159
P++KAT + H+ + AW +DL+ SG D + +W+ + R
Sbjct: 221 PSSKATVLRGHESEVFICAWNPVSDLLASGSGDSTAR---IWNLNENSNGGSTQLVLRHC 277
Query: 160 YSSLTHDHP----ISSLAWAPGGDMFAVGSYNTL-RLCDKVGWSHSLDKPDTGSVYDLVW 214
HD P ++SL W G + A GSY+ R+ + G S G ++ L W
Sbjct: 278 IREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIWTEDGNLASTLGQHKGPIFALKW 337
Query: 215 SNDATQIAGA 224
+ I A
Sbjct: 338 NRKGNYILSA 347
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,609,805
Number of Sequences: 539616
Number of extensions: 5238025
Number of successful extensions: 14195
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 311
Number of HSP's that attempted gapping in prelim test: 13740
Number of HSP's gapped (non-prelim): 645
length of query: 323
length of database: 191,569,459
effective HSP length: 117
effective length of query: 206
effective length of database: 128,434,387
effective search space: 26457483722
effective search space used: 26457483722
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)