Query psy11524
Match_columns 323
No_of_seqs 537 out of 2014
Neff 11.4
Searched_HMMs 29240
Date Fri Aug 16 20:38:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11524.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11524hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 7E-44 2.4E-48 296.3 36.0 274 38-321 26-320 (321)
2 1got_B GT-beta; complex (GTP-b 100.0 3.3E-43 1.1E-47 294.8 36.2 273 34-319 45-340 (340)
3 1vyh_C Platelet-activating fac 100.0 1.2E-43 4E-48 304.9 34.2 270 37-320 101-409 (410)
4 3frx_A Guanine nucleotide-bind 100.0 2.8E-42 9.6E-47 286.6 38.1 274 34-322 7-317 (319)
5 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.6E-42 9.1E-47 289.9 36.4 275 34-322 5-335 (345)
6 2pbi_B Guanine nucleotide-bind 100.0 4.8E-42 1.6E-46 289.2 37.9 273 35-319 55-354 (354)
7 4gqb_B Methylosome protein 50; 100.0 3E-42 1E-46 288.7 34.1 272 41-322 27-331 (344)
8 4g56_B MGC81050 protein; prote 100.0 4.7E-42 1.6E-46 289.5 34.4 272 40-321 38-342 (357)
9 2xzm_R RACK1; ribosome, transl 100.0 5.1E-41 1.7E-45 281.9 39.4 273 34-322 11-340 (343)
10 2ymu_A WD-40 repeat protein; u 100.0 1.7E-41 5.9E-46 303.9 36.2 272 37-319 296-577 (577)
11 2ynn_A Coatomer subunit beta'; 100.0 1.3E-40 4.4E-45 274.8 36.2 271 36-321 5-301 (304)
12 2hes_X YDR267CP; beta-propelle 100.0 1.1E-40 3.6E-45 278.4 35.5 271 35-322 5-328 (330)
13 3iz6_a 40S ribosomal protein R 100.0 5.9E-42 2E-46 291.5 28.3 276 35-322 57-375 (380)
14 1erj_A Transcriptional repress 100.0 2.2E-39 7.6E-44 276.8 36.9 272 41-322 61-389 (393)
15 2ymu_A WD-40 repeat protein; u 100.0 1E-39 3.5E-44 292.4 35.9 273 37-320 255-537 (577)
16 1nr0_A Actin interacting prote 100.0 2.3E-39 7.9E-44 291.7 37.9 274 36-321 51-396 (611)
17 1nr0_A Actin interacting prote 100.0 1.6E-39 5.3E-44 292.9 36.6 271 37-320 183-609 (611)
18 2ynn_A Coatomer subunit beta'; 100.0 1E-39 3.4E-44 269.4 32.2 240 75-321 6-258 (304)
19 4ery_A WD repeat-containing pr 100.0 8.3E-39 2.8E-43 265.0 37.7 276 35-320 14-310 (312)
20 4aow_A Guanine nucleotide-bind 100.0 2E-38 6.7E-43 265.5 37.0 280 33-322 27-337 (340)
21 1vyh_C Platelet-activating fac 100.0 4.2E-39 1.4E-43 276.5 31.7 237 79-321 106-368 (410)
22 3ow8_A WD repeat-containing pr 100.0 5.3E-39 1.8E-43 266.9 31.0 239 74-322 24-279 (321)
23 3dm0_A Maltose-binding peripla 100.0 3.9E-38 1.4E-42 287.9 37.4 272 35-321 373-692 (694)
24 1gxr_A ESG1, transducin-like e 100.0 1.4E-37 4.8E-42 259.8 36.9 271 39-321 46-336 (337)
25 1got_B GT-beta; complex (GTP-b 100.0 1.8E-37 6E-42 260.0 35.1 236 75-321 48-300 (340)
26 2pm7_B Protein transport prote 100.0 8.8E-38 3E-42 256.9 32.5 236 79-321 7-284 (297)
27 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.9E-37 6.4E-42 260.4 32.9 241 73-321 6-282 (345)
28 3zwl_B Eukaryotic translation 100.0 5.1E-37 1.7E-41 259.4 35.7 276 35-322 23-346 (369)
29 1k8k_C P40, ARP2/3 complex 41 100.0 1.6E-37 5.5E-42 263.1 32.4 271 40-321 4-360 (372)
30 1gxr_A ESG1, transducin-like e 100.0 6.2E-37 2.1E-41 255.9 35.1 268 43-322 8-296 (337)
31 3ei3_B DNA damage-binding prot 100.0 2.1E-37 7.3E-42 263.7 31.3 278 34-322 63-382 (383)
32 3i2n_A WD repeat-containing pr 100.0 1.4E-37 4.9E-42 261.9 29.4 274 38-322 12-353 (357)
33 3frx_A Guanine nucleotide-bind 100.0 1.6E-36 5.6E-41 251.9 33.1 238 72-321 7-266 (319)
34 3dwl_C Actin-related protein 2 100.0 9.5E-38 3.2E-42 265.3 26.2 270 39-320 6-377 (377)
35 2pbi_B Guanine nucleotide-bind 100.0 3.5E-36 1.2E-40 253.4 34.4 233 79-321 62-314 (354)
36 3k26_A Polycomb protein EED; W 100.0 6.8E-37 2.3E-41 258.5 29.4 272 38-321 12-365 (366)
37 2hes_X YDR267CP; beta-propelle 100.0 3.4E-36 1.2E-40 251.2 33.1 237 75-322 7-280 (330)
38 3bg1_A Protein SEC13 homolog; 100.0 1.5E-37 5E-42 257.8 24.6 237 79-321 11-292 (316)
39 4g56_B MGC81050 protein; prote 100.0 1.6E-36 5.4E-41 255.7 31.1 236 79-321 40-300 (357)
40 1erj_A Transcriptional repress 100.0 3.5E-36 1.2E-40 257.1 31.8 240 73-321 56-340 (393)
41 4gqb_B Methylosome protein 50; 100.0 3.5E-36 1.2E-40 251.9 31.2 235 80-321 29-288 (344)
42 3odt_A Protein DOA1; ubiquitin 100.0 6.9E-36 2.4E-40 247.0 32.3 272 34-322 8-296 (313)
43 4e54_B DNA damage-binding prot 100.0 2.9E-37 1E-41 267.2 24.7 271 37-322 112-430 (435)
44 1r5m_A SIR4-interacting protei 100.0 8.2E-36 2.8E-40 256.7 33.4 272 39-321 40-424 (425)
45 1sq9_A Antiviral protein SKI8; 100.0 3.6E-36 1.2E-40 257.2 30.2 276 34-322 6-395 (397)
46 4ery_A WD repeat-containing pr 100.0 5.4E-35 1.8E-39 242.0 34.9 235 79-322 21-268 (312)
47 2xzm_R RACK1; ribosome, transl 100.0 3.6E-35 1.2E-39 246.3 32.4 235 76-322 15-285 (343)
48 3jrp_A Fusion protein of prote 100.0 2.9E-35 1E-39 249.6 31.7 233 79-321 9-286 (379)
49 4h5i_A Guanine nucleotide-exch 100.0 2.7E-36 9.1E-41 255.0 24.9 270 44-322 14-343 (365)
50 2pm9_A Protein WEB1, protein t 100.0 1.8E-36 6.3E-41 260.5 23.8 272 42-322 65-414 (416)
51 3iz6_a 40S ribosomal protein R 100.0 6.7E-36 2.3E-40 254.2 26.8 239 73-321 57-328 (380)
52 3vl1_A 26S proteasome regulato 100.0 9.3E-36 3.2E-40 256.5 28.0 266 47-322 59-365 (420)
53 2pm9_A Protein WEB1, protein t 100.0 1E-35 3.5E-40 255.8 28.0 269 44-322 12-337 (416)
54 4aez_A CDC20, WD repeat-contai 100.0 5.9E-35 2E-39 250.2 30.6 271 39-322 86-380 (401)
55 3gre_A Serine/threonine-protei 100.0 6.4E-35 2.2E-39 252.7 28.2 270 37-319 55-437 (437)
56 2j04_B YDR362CP, TAU91; beta p 100.0 1.2E-35 4E-40 260.9 22.7 271 38-321 201-516 (524)
57 3sfz_A APAF-1, apoptotic pepti 100.0 3.1E-34 1.1E-38 277.8 34.9 274 38-321 609-1033(1249)
58 3mkq_A Coatomer beta'-subunit; 100.0 4E-34 1.4E-38 266.0 33.8 276 36-321 5-301 (814)
59 1k8k_C P40, ARP2/3 complex 41 100.0 2.7E-34 9.3E-39 243.3 29.8 232 80-322 7-274 (372)
60 3f3f_A Nucleoporin SEH1; struc 100.0 1.1E-33 3.6E-38 237.0 32.3 240 79-322 9-337 (351)
61 4gga_A P55CDC, cell division c 100.0 1E-33 3.4E-38 244.0 31.5 262 47-322 108-395 (420)
62 2pm7_B Protein transport prote 100.0 3.1E-33 1.1E-37 229.8 32.3 235 38-284 3-285 (297)
63 4a11_B DNA excision repair pro 100.0 4.3E-33 1.5E-37 238.6 34.3 277 37-322 36-365 (408)
64 3dwl_C Actin-related protein 2 100.0 1.8E-35 6.1E-40 251.2 18.8 229 80-320 10-279 (377)
65 3vl1_A 26S proteasome regulato 100.0 7.4E-34 2.5E-38 244.7 29.1 267 46-323 99-420 (420)
66 1yfq_A Cell cycle arrest prote 100.0 7.8E-34 2.7E-38 237.8 28.3 259 40-314 7-315 (342)
67 3dw8_B Serine/threonine-protei 100.0 5.5E-34 1.9E-38 247.4 26.8 265 42-319 26-443 (447)
68 3dm0_A Maltose-binding peripla 100.0 3.7E-33 1.3E-37 255.1 33.4 231 79-321 380-631 (694)
69 3ei3_B DNA damage-binding prot 100.0 1.2E-33 4E-38 240.6 27.7 235 74-321 65-338 (383)
70 2j04_A TAU60, YPL007P, hypothe 100.0 8.6E-34 3E-38 244.3 26.6 249 38-311 46-350 (588)
71 3bg1_A Protein SEC13 homolog; 100.0 5.3E-34 1.8E-38 236.5 24.4 253 38-310 7-313 (316)
72 3dw8_B Serine/threonine-protei 100.0 1E-33 3.6E-38 245.6 25.8 234 78-322 25-373 (447)
73 2xyi_A Probable histone-bindin 100.0 3.7E-33 1.3E-37 241.1 28.9 241 73-322 120-410 (430)
74 2j04_A TAU60, YPL007P, hypothe 100.0 4.1E-34 1.4E-38 246.3 22.3 249 42-320 13-295 (588)
75 3gre_A Serine/threonine-protei 100.0 1.1E-33 3.7E-38 245.0 25.2 263 51-322 34-359 (437)
76 1r5m_A SIR4-interacting protei 100.0 8.9E-33 3E-37 237.8 30.5 239 72-321 36-360 (425)
77 2oaj_A Protein SNI1; WD40 repe 100.0 2.2E-32 7.5E-37 255.2 35.1 192 39-241 12-247 (902)
78 3v7d_B Cell division control p 100.0 2.2E-32 7.7E-37 238.5 32.8 269 36-322 113-421 (464)
79 1pgu_A Actin interacting prote 100.0 5.3E-32 1.8E-36 243.9 36.1 273 36-322 195-614 (615)
80 3mkq_A Coatomer beta'-subunit; 100.0 3.7E-33 1.3E-37 259.5 29.0 234 79-321 11-258 (814)
81 3jro_A Fusion protein of prote 100.0 2E-33 6.7E-38 258.6 26.8 233 79-321 7-284 (753)
82 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-32 5E-37 235.4 30.3 233 79-322 79-342 (402)
83 3i2n_A WD repeat-containing pr 100.0 9.7E-33 3.3E-37 232.3 28.7 233 79-321 16-290 (357)
84 1yfq_A Cell cycle arrest prote 100.0 4.5E-33 1.6E-37 233.1 25.5 233 79-322 9-282 (342)
85 2j04_B YDR362CP, TAU91; beta p 100.0 2.2E-34 7.4E-39 252.8 18.2 240 73-322 125-428 (524)
86 4ggc_A P55CDC, cell division c 100.0 7.3E-32 2.5E-36 223.4 32.3 261 47-322 28-315 (318)
87 1pgu_A Actin interacting prote 100.0 2.9E-32 1E-36 245.6 32.0 271 36-319 55-363 (615)
88 4aow_A Guanine nucleotide-bind 100.0 8.7E-32 3E-36 225.1 32.1 240 70-321 26-285 (340)
89 4e54_B DNA damage-binding prot 100.0 9.4E-33 3.2E-37 239.0 26.4 234 80-321 118-386 (435)
90 3sfz_A APAF-1, apoptotic pepti 100.0 4E-33 1.4E-37 270.1 26.7 268 37-321 875-1206(1249)
91 1sq9_A Antiviral protein SKI8; 100.0 9.5E-33 3.3E-37 235.9 26.0 233 76-321 10-321 (397)
92 3zwl_B Eukaryotic translation 100.0 6E-32 2E-36 228.3 30.6 234 76-321 27-303 (369)
93 3mmy_A MRNA export factor; mRN 100.0 6.4E-32 2.2E-36 228.1 28.2 272 35-319 30-343 (368)
94 3odt_A Protein DOA1; ubiquitin 100.0 1.7E-31 5.9E-36 220.6 29.0 231 73-321 9-254 (313)
95 3jrp_A Fusion protein of prote 100.0 5.8E-31 2E-35 223.2 30.3 238 38-283 5-286 (379)
96 4h5i_A Guanine nucleotide-exch 100.0 2.4E-31 8.3E-36 224.7 27.7 237 38-284 67-343 (365)
97 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-31 5.9E-36 228.7 27.2 231 83-322 36-299 (402)
98 3k26_A Polycomb protein EED; W 100.0 4.2E-32 1.4E-36 229.1 22.7 234 79-322 16-318 (366)
99 3f3f_A Nucleoporin SEH1; struc 100.0 1.4E-30 4.7E-35 218.0 30.8 237 38-284 5-337 (351)
100 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-30 5.9E-35 224.8 30.7 259 40-322 129-414 (435)
101 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.1E-30 7.2E-35 225.2 31.1 232 80-321 101-390 (450)
102 3v7d_B Cell division control p 100.0 8.6E-30 2.9E-34 222.2 34.0 266 36-319 154-460 (464)
103 4aez_A CDC20, WD repeat-contai 100.0 5E-30 1.7E-34 219.6 31.2 226 83-322 95-336 (401)
104 3vu4_A KMHSV2; beta-propeller 100.0 5.1E-30 1.8E-34 215.8 30.2 265 39-322 14-336 (355)
105 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2E-29 6.8E-34 218.8 33.7 261 36-322 151-442 (445)
106 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.4E-29 1.2E-33 217.3 34.6 263 36-321 110-390 (445)
107 3mmy_A MRNA export factor; mRN 100.0 1.6E-29 5.6E-34 213.3 31.4 243 73-322 30-304 (368)
108 4gq1_A NUP37; propeller, trans 100.0 3.3E-31 1.1E-35 226.2 19.4 235 80-321 88-388 (393)
109 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.5E-29 1.2E-33 217.5 30.7 191 121-320 101-337 (450)
110 2oaj_A Protein SNI1; WD40 repe 100.0 1.7E-29 6E-34 235.7 29.6 232 76-320 12-310 (902)
111 3lrv_A PRE-mRNA-splicing facto 100.0 9.2E-30 3.1E-34 213.4 23.5 252 50-319 42-330 (343)
112 3bws_A Protein LP49; two-domai 100.0 5.2E-28 1.8E-32 209.0 33.4 265 45-321 123-431 (433)
113 3jro_A Fusion protein of prote 100.0 1.4E-29 4.7E-34 233.0 24.8 238 38-283 3-284 (753)
114 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-29 4.7E-34 212.3 22.1 218 88-321 43-291 (343)
115 2xyi_A Probable histone-bindin 100.0 2.5E-28 8.5E-33 210.9 29.0 238 38-285 122-411 (430)
116 3vu4_A KMHSV2; beta-propeller 100.0 1.8E-28 6.2E-33 206.4 27.4 225 79-322 17-271 (355)
117 1l0q_A Surface layer protein; 100.0 5.8E-28 2E-32 205.9 31.0 239 71-321 21-274 (391)
118 1p22_A F-BOX/WD-repeat protein 100.0 3.2E-28 1.1E-32 210.6 29.4 221 79-321 131-364 (435)
119 4gga_A P55CDC, cell division c 100.0 1.3E-27 4.6E-32 205.7 32.8 234 39-284 142-395 (420)
120 4a11_B DNA excision repair pro 100.0 1.3E-27 4.6E-32 204.4 31.7 235 79-321 41-322 (408)
121 2w18_A PALB2, fancn, partner a 100.0 4.6E-28 1.6E-32 196.7 25.9 240 35-320 77-355 (356)
122 3bws_A Protein LP49; two-domai 100.0 2.3E-26 8E-31 198.6 31.9 236 74-321 115-389 (433)
123 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.2E-26 4.2E-31 199.1 28.7 215 79-304 176-410 (415)
124 1l0q_A Surface layer protein; 100.0 8E-26 2.8E-30 192.7 33.3 235 38-284 26-275 (391)
125 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.7E-25 5.9E-30 192.0 31.9 218 93-321 143-386 (415)
126 4ggc_A P55CDC, cell division c 100.0 9.5E-26 3.3E-30 186.6 28.7 230 39-284 62-315 (318)
127 4gq1_A NUP37; propeller, trans 99.9 1.4E-26 4.9E-31 197.5 19.8 213 61-284 102-389 (393)
128 2w18_A PALB2, fancn, partner a 99.9 7.8E-25 2.7E-29 177.8 22.7 214 43-282 110-355 (356)
129 2ecf_A Dipeptidyl peptidase IV 99.9 1.3E-24 4.3E-29 200.2 25.1 265 44-321 36-412 (741)
130 2ojh_A Uncharacterized protein 99.9 2.3E-24 7.8E-29 176.1 22.6 228 76-313 36-293 (297)
131 2ecf_A Dipeptidyl peptidase IV 99.9 2.3E-24 7.8E-29 198.5 22.3 231 81-320 36-365 (741)
132 1k32_A Tricorn protease; prote 99.9 7.3E-24 2.5E-28 201.8 25.7 268 38-319 197-499 (1045)
133 1nir_A Nitrite reductase; hemo 99.9 9.2E-23 3.2E-27 180.4 29.7 264 47-321 181-513 (543)
134 3u4y_A Uncharacterized protein 99.9 2.1E-22 7.1E-27 167.6 30.1 232 80-322 39-304 (331)
135 1xfd_A DIP, dipeptidyl aminope 99.9 1.2E-23 4.1E-28 193.2 24.7 266 46-321 18-392 (723)
136 1ri6_A Putative isomerase YBHE 99.9 4.4E-23 1.5E-27 172.3 26.0 239 74-321 30-307 (343)
137 2z3z_A Dipeptidyl aminopeptida 99.9 2.5E-23 8.5E-28 190.6 25.3 264 45-321 82-434 (706)
138 1k32_A Tricorn protease; prote 99.9 7.1E-23 2.4E-27 195.0 27.7 270 43-322 294-637 (1045)
139 3vgz_A Uncharacterized protein 99.9 6.9E-22 2.4E-26 165.8 30.1 258 43-312 39-334 (353)
140 3hfq_A Uncharacterized protein 99.9 6.2E-22 2.1E-26 166.0 26.9 234 78-320 36-315 (347)
141 2ojh_A Uncharacterized protein 99.9 1.1E-21 3.8E-26 160.1 27.3 209 101-321 19-257 (297)
142 3o4h_A Acylamino-acid-releasin 99.9 2.1E-23 7.1E-28 187.0 18.4 228 80-320 20-274 (582)
143 3o4h_A Acylamino-acid-releasin 99.9 2.7E-22 9.2E-27 179.8 25.3 255 44-314 21-304 (582)
144 1nir_A Nitrite reductase; hemo 99.9 5.4E-22 1.9E-26 175.4 26.9 262 51-321 144-457 (543)
145 1pby_B Quinohemoprotein amine 99.9 1.1E-22 3.7E-27 169.5 19.5 235 73-321 22-309 (337)
146 3vgz_A Uncharacterized protein 99.9 2.2E-21 7.5E-26 162.7 27.5 234 78-321 37-302 (353)
147 2z3z_A Dipeptidyl aminopeptida 99.9 1.3E-21 4.4E-26 179.3 24.5 220 82-312 82-376 (706)
148 1xfd_A DIP, dipeptidyl aminope 99.9 1.6E-22 5.3E-27 185.8 18.5 227 82-319 17-341 (723)
149 3scy_A Hypothetical bacterial 99.9 6E-20 2E-24 154.7 30.8 231 80-320 48-335 (361)
150 3u4y_A Uncharacterized protein 99.9 2.5E-20 8.4E-25 155.1 25.4 227 87-321 3-251 (331)
151 2oit_A Nucleoporin 214KDA; NH2 99.9 3.7E-21 1.3E-25 165.7 20.9 194 81-284 36-278 (434)
152 2oit_A Nucleoporin 214KDA; NH2 99.9 1.6E-19 5.6E-24 155.4 30.6 156 79-237 90-279 (434)
153 1ri6_A Putative isomerase YBHE 99.9 2.8E-20 9.5E-25 155.3 25.0 221 93-321 4-261 (343)
154 3pe7_A Oligogalacturonate lyas 99.9 1E-20 3.4E-25 160.9 21.8 275 38-320 24-380 (388)
155 1z68_A Fibroblast activation p 99.9 4E-21 1.4E-25 176.4 18.9 261 49-321 20-390 (719)
156 1z68_A Fibroblast activation p 99.9 2.8E-21 9.7E-26 177.4 16.5 222 85-318 19-340 (719)
157 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.4E-19 4.7E-24 152.8 25.2 233 80-321 38-340 (365)
158 3azo_A Aminopeptidase; POP fam 99.9 7.4E-20 2.5E-24 166.4 25.0 269 40-320 19-365 (662)
159 1jmx_B Amine dehydrogenase; ox 99.9 9E-20 3.1E-24 152.6 22.9 221 86-321 4-324 (349)
160 4a5s_A Dipeptidyl peptidase 4 99.9 7E-20 2.4E-24 168.5 21.3 230 82-320 17-351 (740)
161 3fvz_A Peptidyl-glycine alpha- 99.9 9.3E-18 3.2E-22 139.5 32.3 237 81-322 23-322 (329)
162 3hfq_A Uncharacterized protein 99.8 1E-18 3.6E-23 146.3 25.1 232 42-283 37-316 (347)
163 1q7f_A NHL, brain tumor CG1071 99.8 4.2E-17 1.5E-21 132.7 31.5 233 80-322 28-280 (286)
164 3azo_A Aminopeptidase; POP fam 99.8 8.9E-19 3E-23 159.3 22.8 245 66-320 8-321 (662)
165 4a5s_A Dipeptidyl peptidase 4 99.8 1.7E-18 5.9E-23 159.2 23.9 263 46-320 18-396 (740)
166 3pe7_A Oligogalacturonate lyas 99.8 1.3E-18 4.5E-23 147.9 21.3 225 87-321 41-328 (388)
167 3scy_A Hypothetical bacterial 99.8 8.5E-17 2.9E-21 135.4 31.9 246 43-300 48-360 (361)
168 1jmx_B Amine dehydrogenase; ox 99.8 2E-18 6.7E-23 144.4 21.3 199 71-284 30-325 (349)
169 3c5m_A Oligogalacturonate lyas 99.8 4.8E-19 1.6E-23 150.8 17.3 261 47-320 38-380 (396)
170 1pby_B Quinohemoprotein amine 99.8 2.9E-18 9.8E-23 142.6 20.2 212 94-321 2-268 (337)
171 3e5z_A Putative gluconolactona 99.8 1.8E-16 6.2E-21 129.7 26.7 225 79-316 25-281 (296)
172 2dg1_A DRP35, lactonase; beta 99.8 2.1E-15 7.1E-20 125.4 31.2 256 46-312 7-300 (333)
173 3c5m_A Oligogalacturonate lyas 99.8 2.7E-18 9.4E-23 146.1 13.7 227 83-321 37-328 (396)
174 2gop_A Trilobed protease; beta 99.8 2.3E-16 7.8E-21 131.9 24.7 216 80-321 13-290 (347)
175 2gop_A Trilobed protease; beta 99.8 3.1E-16 1.1E-20 131.1 25.4 216 82-320 59-329 (347)
176 1q7f_A NHL, brain tumor CG1071 99.8 5.2E-15 1.8E-19 120.3 30.0 234 42-284 27-280 (286)
177 1rwi_B Serine/threonine-protei 99.8 3.2E-15 1.1E-19 120.5 27.9 229 83-322 25-264 (270)
178 2xdw_A Prolyl endopeptidase; a 99.7 3.4E-16 1.2E-20 143.3 24.2 233 82-321 125-413 (710)
179 1jof_A Carboxy-CIS,CIS-muconat 99.7 3.6E-16 1.2E-20 131.9 22.5 191 123-321 40-290 (365)
180 2z2n_A Virginiamycin B lyase; 99.7 1.1E-12 3.9E-17 106.9 37.9 268 40-321 10-294 (299)
181 3fvz_A Peptidyl-glycine alpha- 99.7 1.4E-14 4.8E-19 120.3 26.8 196 81-284 90-322 (329)
182 2bkl_A Prolyl endopeptidase; m 99.7 7.7E-16 2.6E-20 140.6 20.5 231 80-321 119-396 (695)
183 2oiz_A Aromatic amine dehydrog 99.7 1.4E-14 4.6E-19 121.8 24.3 250 39-304 46-360 (361)
184 2dg1_A DRP35, lactonase; beta 99.7 3.6E-15 1.2E-19 124.0 19.6 227 81-320 5-261 (333)
185 2z2n_A Virginiamycin B lyase; 99.7 1.8E-12 6.3E-17 105.6 34.7 229 80-320 13-253 (299)
186 2xdw_A Prolyl endopeptidase; a 99.7 7.9E-14 2.7E-18 127.7 26.9 219 91-319 81-363 (710)
187 3no2_A Uncharacterized protein 99.7 1.3E-13 4.5E-18 111.2 24.7 207 93-309 5-230 (276)
188 1yr2_A Prolyl oligopeptidase; 99.6 2.7E-14 9.1E-19 131.4 22.3 232 82-321 163-440 (741)
189 3dsm_A Uncharacterized protein 99.6 2.4E-13 8.1E-18 112.8 25.6 224 82-320 44-300 (328)
190 3e5z_A Putative gluconolactona 99.6 6.3E-13 2.2E-17 108.6 26.2 227 41-284 24-286 (296)
191 2oiz_A Aromatic amine dehydrog 99.6 1.1E-13 3.7E-18 116.3 21.7 224 86-321 54-333 (361)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.2E-12 4.1E-17 107.6 27.5 228 81-321 17-298 (314)
193 3dr2_A Exported gluconolactona 99.6 1.1E-12 3.7E-17 107.7 26.5 225 79-316 42-301 (305)
194 2qc5_A Streptogramin B lactona 99.6 5.9E-11 2E-15 96.7 36.2 266 42-320 17-298 (300)
195 3g4e_A Regucalcin; six bladed 99.6 2.7E-12 9.4E-17 104.8 28.0 219 81-310 12-260 (297)
196 2ghs_A AGR_C_1268P; regucalcin 99.6 4.2E-12 1.4E-16 105.2 29.1 217 83-311 50-291 (326)
197 2qc5_A Streptogramin B lactona 99.6 4.2E-11 1.4E-15 97.5 33.7 229 80-320 18-258 (300)
198 2bkl_A Prolyl endopeptidase; m 99.6 2E-13 6.8E-18 124.7 21.7 215 42-261 118-374 (695)
199 1qks_A Cytochrome CD1 nitrite 99.6 2.8E-11 9.7E-16 107.0 32.7 264 46-320 198-536 (567)
200 1qks_A Cytochrome CD1 nitrite 99.6 8.6E-12 3E-16 110.3 28.5 242 70-321 185-476 (567)
201 1rwi_B Serine/threonine-protei 99.5 1.4E-11 4.6E-16 99.1 26.9 228 46-284 25-264 (270)
202 1yr2_A Prolyl oligopeptidase; 99.5 2.8E-12 9.5E-17 118.0 24.7 219 90-320 115-391 (741)
203 3hrp_A Uncharacterized protein 99.5 8.4E-12 2.9E-16 106.5 24.6 225 82-320 131-408 (409)
204 3g4e_A Regucalcin; six bladed 99.5 4.1E-11 1.4E-15 97.8 26.9 189 76-275 48-263 (297)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 4.9E-11 1.7E-15 97.9 27.6 193 80-284 69-299 (314)
206 3iuj_A Prolyl endopeptidase; h 99.5 2.2E-12 7.4E-17 117.7 20.9 231 80-320 127-403 (693)
207 1xip_A Nucleoporin NUP159; bet 99.5 1.9E-12 6.4E-17 108.4 18.5 170 83-272 39-232 (388)
208 3no2_A Uncharacterized protein 99.5 6.1E-12 2.1E-16 101.5 19.3 176 133-320 4-193 (276)
209 2ghs_A AGR_C_1268P; regucalcin 99.4 3.6E-10 1.2E-14 93.5 28.4 214 47-275 51-293 (326)
210 2mad_H Methylamine dehydrogena 99.4 4.7E-10 1.6E-14 94.4 29.0 238 71-321 56-349 (373)
211 3dsm_A Uncharacterized protein 99.4 1.4E-10 4.8E-15 96.0 24.6 202 70-282 72-300 (328)
212 3dr2_A Exported gluconolactona 99.4 2.8E-10 9.4E-15 93.3 22.5 221 40-274 40-297 (305)
213 1xip_A Nucleoporin NUP159; bet 99.4 5.6E-11 1.9E-15 99.5 17.7 163 46-223 39-230 (388)
214 3hrp_A Uncharacterized protein 99.4 5.2E-10 1.8E-14 95.4 24.0 217 46-275 132-400 (409)
215 3iuj_A Prolyl endopeptidase; h 99.3 1.3E-10 4.4E-15 106.1 21.1 211 42-261 126-382 (693)
216 3sjl_D Methylamine dehydrogena 99.3 2.1E-09 7.1E-14 89.7 24.9 238 71-321 68-362 (386)
217 3sjl_D Methylamine dehydrogena 99.3 2.9E-10 9.8E-15 94.9 19.3 224 49-284 82-363 (386)
218 3c75_H MADH, methylamine dehyd 99.3 8.4E-10 2.9E-14 93.7 21.2 239 70-321 107-401 (426)
219 2mad_H Methylamine dehydrogena 99.3 8.9E-09 3E-13 86.6 26.5 222 49-284 70-350 (373)
220 2qe8_A Uncharacterized protein 99.2 3.5E-09 1.2E-13 88.2 22.8 223 82-313 17-312 (343)
221 2ece_A 462AA long hypothetical 99.2 1.4E-08 4.8E-13 85.5 24.9 215 88-310 88-399 (462)
222 2qe8_A Uncharacterized protein 99.1 2.1E-08 7.1E-13 83.5 21.5 188 123-320 17-276 (343)
223 1npe_A Nidogen, entactin; glyc 99.1 2E-07 6.8E-12 74.6 26.5 173 82-261 79-262 (267)
224 1mda_H Methylamine dehydrogena 99.1 6E-09 2E-13 87.0 17.8 232 71-322 55-346 (368)
225 1npe_A Nidogen, entactin; glyc 99.1 5.3E-07 1.8E-11 72.1 28.0 214 93-320 1-236 (267)
226 2p4o_A Hypothetical protein; p 99.1 5.2E-07 1.8E-11 73.7 28.3 226 72-311 22-277 (306)
227 3c75_H MADH, methylamine dehyd 99.1 2.9E-08 9.7E-13 84.3 20.9 218 91-321 82-358 (426)
228 1fwx_A Nitrous oxide reductase 99.1 1.6E-09 5.5E-14 94.3 12.8 210 91-311 99-407 (595)
229 2iwa_A Glutamine cyclotransfer 99.0 1.3E-07 4.6E-12 74.7 21.5 191 124-322 22-237 (266)
230 2fp8_A Strictosidine synthase; 99.0 2.4E-07 8.1E-12 76.3 23.3 229 82-322 19-313 (322)
231 3hxj_A Pyrrolo-quinoline quino 98.9 1.1E-07 3.8E-12 78.3 18.7 212 93-321 107-323 (330)
232 1mda_H Methylamine dehydrogena 98.9 1.5E-07 5E-12 78.6 19.1 203 49-259 69-366 (368)
233 2iwa_A Glutamine cyclotransfer 98.9 8.2E-07 2.8E-11 70.2 21.3 200 72-284 9-237 (266)
234 1fwx_A Nitrous oxide reductase 98.9 7.3E-08 2.5E-12 84.0 15.3 189 77-273 129-407 (595)
235 3tc9_A Hypothetical hydrolase; 98.8 6.7E-06 2.3E-10 70.4 25.3 152 82-235 137-300 (430)
236 3qqz_A Putative uncharacterize 98.8 2.7E-05 9.1E-10 61.2 26.9 191 81-280 26-249 (255)
237 2xe4_A Oligopeptidase B; hydro 98.8 1.3E-06 4.5E-11 80.4 21.5 192 83-281 175-395 (751)
238 3hxj_A Pyrrolo-quinoline quino 98.8 1.5E-07 5.2E-12 77.5 13.6 217 82-319 60-281 (330)
239 2ece_A 462AA long hypothetical 98.8 1.2E-06 4.3E-11 73.8 18.8 182 83-272 139-399 (462)
240 2hz6_A Endoplasmic reticulum t 98.7 2.9E-09 9.9E-14 89.6 2.9 140 92-242 8-155 (369)
241 2hz6_A Endoplasmic reticulum t 98.7 1.6E-09 5.6E-14 91.1 0.8 172 133-320 8-190 (369)
242 3nol_A Glutamine cyclotransfer 98.7 5.9E-06 2E-10 64.6 20.4 188 72-272 31-243 (262)
243 3nol_A Glutamine cyclotransfer 98.7 2.5E-06 8.5E-11 66.8 18.1 182 120-310 38-243 (262)
244 3v65_B Low-density lipoprotein 98.7 9.2E-05 3.1E-09 62.4 29.1 222 85-319 80-315 (386)
245 2fp8_A Strictosidine synthase; 98.7 3.5E-06 1.2E-10 69.3 19.5 176 123-311 19-248 (322)
246 4hw6_A Hypothetical protein, I 98.7 1.7E-05 5.9E-10 67.9 24.2 230 82-321 139-432 (433)
247 3qqz_A Putative uncharacterize 98.7 5.2E-05 1.8E-09 59.6 24.6 198 117-318 21-249 (255)
248 2p4o_A Hypothetical protein; p 98.7 7.7E-05 2.6E-09 60.7 26.8 220 45-275 32-279 (306)
249 4a2l_A BT_4663, two-component 98.6 0.00031 1.1E-08 65.2 34.4 222 81-319 356-611 (795)
250 1kb0_A Quinohemoprotein alcoho 98.6 3.9E-06 1.3E-10 76.2 19.9 218 92-321 127-506 (677)
251 3v64_C Agrin; beta propeller, 98.6 0.00013 4.5E-09 60.6 31.0 224 83-319 35-272 (349)
252 3nok_A Glutaminyl cyclase; bet 98.6 1.5E-05 5E-10 62.5 19.3 176 125-310 57-253 (268)
253 2xe4_A Oligopeptidase B; hydro 98.6 1.6E-05 5.5E-10 73.2 23.0 185 124-319 175-395 (751)
254 3nok_A Glutaminyl cyclase; bet 98.6 2E-05 6.8E-10 61.7 19.9 182 73-270 44-251 (268)
255 4a2l_A BT_4663, two-component 98.6 0.00048 1.6E-08 63.9 34.8 223 81-320 262-524 (795)
256 3kya_A Putative phosphatase; s 98.6 0.00012 4.1E-09 63.1 25.9 151 83-234 140-339 (496)
257 1ijq_A LDL receptor, low-densi 98.5 0.00023 8E-09 58.2 30.1 214 95-320 3-236 (316)
258 3v65_B Low-density lipoprotein 98.5 0.00023 7.7E-09 60.0 26.6 173 80-257 114-296 (386)
259 1yiq_A Quinohemoprotein alcoho 98.5 1.8E-05 6E-10 72.1 20.5 218 93-321 121-504 (689)
260 3mbr_X Glutamine cyclotransfer 98.5 7.7E-05 2.6E-09 57.8 20.5 182 120-310 16-222 (243)
261 3v64_C Agrin; beta propeller, 98.5 0.00036 1.2E-08 57.9 27.8 173 80-257 71-253 (349)
262 3v9f_A Two-component system se 98.5 0.00095 3.2E-08 61.8 31.2 225 81-319 312-565 (781)
263 3mbr_X Glutamine cyclotransfer 98.4 0.00034 1.2E-08 54.2 22.6 186 73-272 10-222 (243)
264 3v9f_A Two-component system se 98.4 0.0016 5.4E-08 60.3 30.4 221 81-315 362-605 (781)
265 1kb0_A Quinohemoprotein alcoho 98.4 2.3E-05 8E-10 71.1 17.7 173 85-261 246-531 (677)
266 3p5b_L Low density lipoprotein 98.4 0.00084 2.9E-08 56.8 29.6 157 79-238 109-279 (400)
267 3sov_A LRP-6, low-density lipo 98.3 0.00083 2.8E-08 54.9 26.2 172 82-258 35-217 (318)
268 1yiq_A Quinohemoprotein alcoho 98.3 7E-05 2.4E-09 68.2 19.2 181 86-273 239-538 (689)
269 1ijq_A LDL receptor, low-densi 98.3 0.00093 3.2E-08 54.6 29.1 155 80-237 28-196 (316)
270 3sov_A LRP-6, low-density lipo 98.3 0.00097 3.3E-08 54.5 26.8 214 95-320 6-236 (318)
271 3p5b_L Low density lipoprotein 98.3 0.0015 5E-08 55.4 31.4 214 94-319 84-317 (400)
272 4hw6_A Hypothetical protein, I 98.3 0.00025 8.6E-09 60.7 20.6 188 124-319 140-371 (433)
273 3q7m_A Lipoprotein YFGL, BAMB; 98.2 0.00025 8.6E-09 59.4 20.3 141 93-243 53-214 (376)
274 2xbg_A YCF48-like protein; pho 98.2 0.0013 4.4E-08 54.0 32.4 221 81-318 79-318 (327)
275 3m0c_C LDL receptor, low-densi 98.2 0.0015 5E-08 60.2 25.7 157 80-239 422-592 (791)
276 3a9g_A Putative uncharacterize 98.2 0.002 6.8E-08 53.5 25.7 219 81-310 28-330 (354)
277 3s25_A Hypothetical 7-bladed b 98.1 0.0005 1.7E-08 55.7 19.0 193 90-309 22-240 (302)
278 2p9w_A MAL S 1 allergenic prot 98.1 0.00039 1.3E-08 56.4 17.7 157 163-320 9-213 (334)
279 3m0c_C LDL receptor, low-densi 98.1 0.0059 2E-07 56.2 31.1 177 95-282 397-587 (791)
280 3s94_A LRP-6, low-density lipo 98.1 0.0049 1.7E-07 55.2 29.8 155 82-241 84-248 (619)
281 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.00067 2.3E-08 56.8 19.8 209 92-320 102-335 (376)
282 2p9w_A MAL S 1 allergenic prot 98.1 0.00058 2E-08 55.4 18.0 152 82-236 13-215 (334)
283 1kv9_A Type II quinohemoprotei 98.1 0.00045 1.6E-08 62.6 19.4 219 93-321 117-487 (668)
284 3tc9_A Hypothetical hydrolase; 98.1 0.00023 7.9E-09 60.9 16.6 150 124-282 138-299 (430)
285 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0041 1.4E-07 55.8 25.0 155 82-241 80-242 (628)
286 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0061 2.1E-07 54.7 25.9 155 81-238 36-199 (628)
287 1k3i_A Galactose oxidase precu 98.0 0.00033 1.1E-08 63.5 17.6 112 86-200 190-327 (656)
288 3amr_A 3-phytase; beta-propell 98.0 0.002 6.9E-08 52.7 20.2 176 134-321 40-262 (355)
289 2ism_A Putative oxidoreductase 98.0 0.0052 1.8E-07 51.0 24.1 99 81-185 30-153 (352)
290 3s94_A LRP-6, low-density lipo 98.0 0.0052 1.8E-07 55.1 23.8 156 80-238 38-204 (619)
291 1n7d_A LDL receptor, low-densi 97.9 9E-05 3.1E-09 67.5 11.6 155 80-237 404-572 (699)
292 2xbg_A YCF48-like protein; pho 97.9 0.0066 2.3E-07 49.7 28.8 218 80-316 34-273 (327)
293 3s25_A Hypothetical 7-bladed b 97.9 0.0051 1.7E-07 49.8 20.3 160 87-269 58-238 (302)
294 3kya_A Putative phosphatase; s 97.8 0.0035 1.2E-07 54.1 19.1 144 124-275 140-331 (496)
295 3amr_A 3-phytase; beta-propell 97.7 0.012 4.1E-07 48.2 22.9 164 92-261 39-242 (355)
296 1kv9_A Type II quinohemoprotei 97.7 0.0036 1.2E-07 56.8 19.2 155 86-243 234-495 (668)
297 1k3i_A Galactose oxidase precu 97.7 0.001 3.5E-08 60.3 15.6 222 83-311 244-530 (656)
298 1n7d_A LDL receptor, low-densi 97.7 0.00019 6.5E-09 65.4 10.5 156 83-242 454-620 (699)
299 2ad6_A Methanol dehydrogenase 97.7 0.0052 1.8E-07 54.6 19.3 145 93-243 115-342 (571)
300 2g8s_A Glucose/sorbosone dehyd 97.6 0.022 7.6E-07 47.2 24.4 137 82-223 18-214 (353)
301 2ism_A Putative oxidoreductase 97.6 0.024 8.3E-07 46.9 22.0 174 81-261 74-326 (352)
302 1w6s_A Methanol dehydrogenase 97.6 0.0083 2.9E-07 53.5 18.4 151 87-243 111-349 (599)
303 3sre_A PON1, serum paraoxonase 97.5 0.027 9.1E-07 46.5 21.2 147 83-235 113-297 (355)
304 3pbp_A Nucleoporin NUP82; beta 97.5 0.013 4.6E-07 49.0 17.6 137 133-278 31-206 (452)
305 1flg_A Protein (quinoprotein e 97.5 0.035 1.2E-06 49.4 21.5 72 227-307 465-544 (582)
306 2ad6_A Methanol dehydrogenase 97.4 0.01 3.6E-07 52.7 17.5 56 188-243 445-501 (571)
307 3sre_A PON1, serum paraoxonase 97.4 0.037 1.3E-06 45.7 27.3 174 82-261 50-278 (355)
308 3pbp_A Nucleoporin NUP82; beta 97.4 0.031 1.1E-06 46.9 18.0 143 174-317 28-207 (452)
309 1tl2_A L10, protein (tachylect 97.3 0.03 1E-06 42.4 16.3 138 167-315 41-203 (236)
310 1flg_A Protein (quinoprotein e 97.3 0.014 5E-07 51.8 16.8 82 188-273 467-549 (582)
311 1w6s_A Methanol dehydrogenase 97.1 0.032 1.1E-06 49.7 16.9 82 188-273 454-536 (599)
312 1tl2_A L10, protein (tachylect 97.0 0.021 7E-07 43.4 12.5 135 83-228 42-201 (236)
313 3das_A Putative oxidoreductase 96.6 0.25 8.5E-06 40.6 28.4 140 80-224 30-219 (347)
314 1cru_A Protein (soluble quinop 96.5 0.24 8E-06 42.6 17.3 101 81-185 26-162 (454)
315 2g8s_A Glucose/sorbosone dehyd 96.5 0.28 9.4E-06 40.5 20.3 193 81-282 65-350 (353)
316 2xzh_A Clathrin heavy chain 1; 96.4 0.29 1E-05 39.6 23.9 193 79-283 104-331 (365)
317 3a9g_A Putative uncharacterize 96.4 0.35 1.2E-05 40.0 23.8 177 81-261 72-323 (354)
318 1bpo_A Protein (clathrin); cla 96.3 0.4 1.4E-05 40.5 22.9 192 80-283 104-330 (494)
319 2vpj_A Kelch-like protein 12; 95.7 0.64 2.2E-05 37.1 18.2 107 133-241 62-189 (301)
320 1cru_A Protein (soluble quinop 95.6 0.36 1.2E-05 41.4 14.1 105 206-311 26-163 (454)
321 3das_A Putative oxidoreductase 95.3 0.59 2E-05 38.4 13.7 103 120-225 29-158 (347)
322 1xi4_A Clathrin heavy chain; a 95.2 2.4 8.1E-05 41.7 18.8 207 105-322 49-289 (1630)
323 3ei3_A DNA damage-binding prot 94.6 3.5 0.00012 39.9 22.9 175 134-319 844-1059(1158)
324 1zgk_A Kelch-like ECH-associat 94.2 1.7 5.8E-05 34.8 19.5 106 133-241 70-198 (308)
325 2xn4_A Kelch-like protein 2; s 94.2 1.7 5.9E-05 34.6 19.7 107 133-241 61-187 (302)
326 2xn4_A Kelch-like protein 2; s 93.9 1.7 5.9E-05 34.6 13.3 145 92-240 108-280 (302)
327 2uvk_A YJHT; unknown function, 93.9 2.2 7.7E-05 34.9 14.9 93 92-186 19-127 (357)
328 2vpj_A Kelch-like protein 12; 93.8 1.1 3.6E-05 35.8 11.9 144 92-240 112-282 (301)
329 1xi4_A Clathrin heavy chain; a 93.5 6.5 0.00022 38.8 19.8 187 87-285 71-290 (1630)
330 2zwa_A Leucine carboxyl methyl 93.3 4.6 0.00016 36.7 19.0 148 91-238 396-579 (695)
331 3ii7_A Kelch-like protein 7; p 92.9 2.9 0.0001 33.3 17.8 146 92-241 55-230 (306)
332 3ott_A Two-component system se 92.7 5.9 0.0002 36.3 28.1 214 81-313 62-299 (758)
333 3sbq_A Nitrous-oxide reductase 92.4 0.85 2.9E-05 39.8 9.4 70 167-236 323-408 (638)
334 3ii7_A Kelch-like protein 7; p 91.9 4 0.00014 32.4 20.3 143 95-241 14-183 (306)
335 4asc_A Kelch repeat and BTB do 91.8 4.2 0.00014 32.5 22.4 136 105-241 14-179 (315)
336 3ei3_A DNA damage-binding prot 91.7 10 0.00035 36.8 29.9 266 44-322 553-913 (1158)
337 1zgk_A Kelch-like ECH-associat 91.7 4.3 0.00015 32.4 16.1 106 133-241 24-151 (308)
338 2wg3_C Hedgehog-interacting pr 91.4 6.4 0.00022 33.8 28.0 104 82-186 14-158 (463)
339 2be1_A Serine/threonine-protei 90.4 1.4 4.7E-05 36.0 8.4 106 135-243 11-137 (339)
340 2xzh_A Clathrin heavy chain 1; 89.6 7.3 0.00025 31.7 29.6 221 88-320 73-330 (365)
341 2zwa_A Leucine carboxyl methyl 89.0 4.1 0.00014 37.1 11.3 147 92-240 451-639 (695)
342 3sbq_A Nitrous-oxide reductase 88.7 3.2 0.00011 36.4 9.6 115 82-200 323-482 (638)
343 1bpo_A Protein (clathrin); cla 88.1 11 0.00039 32.0 28.8 223 86-320 70-329 (494)
344 2wg3_C Hedgehog-interacting pr 83.9 20 0.00068 30.7 13.1 101 123-226 14-158 (463)
345 3b7f_A Glycosyl hydrolase, BNR 83.2 18 0.00063 29.9 28.8 184 81-271 54-296 (394)
346 4asc_A Kelch repeat and BTB do 81.5 18 0.00063 28.7 18.8 100 136-241 7-131 (315)
347 2woz_A Kelch repeat and BTB do 81.1 19 0.00065 28.6 21.8 135 105-241 25-189 (318)
348 3ott_A Two-component system se 80.5 35 0.0012 31.2 29.5 216 82-314 103-345 (758)
349 2uvk_A YJHT; unknown function, 76.2 29 0.001 28.0 16.3 91 133-226 19-127 (357)
350 3qhy_B Beta-lactamase inhibito 72.2 34 0.0012 26.9 18.7 208 83-318 25-242 (282)
351 4a9v_A PHOX; hydrolase, beta-p 70.2 25 0.00087 31.0 8.9 58 168-225 477-549 (592)
352 1wp5_A Topoisomerase IV; broke 68.3 45 0.0016 26.9 20.6 180 132-320 3-223 (323)
353 4a9v_A PHOX; hydrolase, beta-p 67.7 37 0.0013 30.0 9.3 62 124-186 477-550 (592)
354 2be1_A Serine/threonine-protei 66.9 27 0.00094 28.4 8.1 25 219-243 11-36 (339)
355 3zwu_A Alkaline phosphatase PH 64.7 31 0.001 30.6 8.5 60 124-184 477-548 (592)
356 4gq2_M Nucleoporin NUP120; bet 62.2 13 0.00044 35.3 6.0 36 208-243 237-273 (950)
357 2woz_A Kelch repeat and BTB do 61.3 59 0.002 25.7 20.1 149 89-241 53-236 (318)
358 3zwu_A Alkaline phosphatase PH 57.2 57 0.002 28.9 8.8 58 208-270 477-547 (592)
359 4fhn_B Nucleoporin NUP120; pro 49.9 13 0.00044 36.1 3.9 36 208-243 239-275 (1139)
360 3f7f_A Nucleoporin NUP120; nuc 46.9 31 0.001 31.4 5.5 35 209-245 224-259 (729)
361 4gq2_M Nucleoporin NUP120; bet 45.7 2E+02 0.007 27.2 14.9 30 168-197 237-267 (950)
362 4fhn_B Nucleoporin NUP120; pro 43.6 40 0.0014 32.7 6.2 30 293-322 239-268 (1139)
363 3no0_A DNA gyrase subunit A; D 43.5 1.2E+02 0.0039 23.8 17.8 111 205-320 66-194 (276)
364 1sqj_A OXG-RCBH, oligoxylogluc 40.8 2.2E+02 0.0076 26.2 25.3 143 81-227 14-190 (789)
365 3mez_B Mannose-specific lectin 40.4 75 0.0026 20.7 9.3 60 218-284 24-84 (113)
366 1suu_A DNA gyrase subunit A; t 38.9 1.5E+02 0.005 23.7 22.5 179 131-320 5-229 (312)
367 3c12_A FLGD, flagellar protein 34.7 1.1E+02 0.0037 20.9 5.9 68 151-218 45-118 (138)
368 3b7f_A Glycosyl hydrolase, BNR 34.4 1.9E+02 0.0065 23.6 27.7 144 122-272 54-251 (394)
369 4hvt_A Ritya.17583.B, post-pro 32.9 2.8E+02 0.0097 25.2 22.8 217 83-307 130-411 (711)
370 1zi0_A DNA gyrase subunit A; b 31.1 2E+02 0.0068 22.8 21.3 180 132-320 1-224 (307)
371 3no0_A DNA gyrase subunit A; D 23.8 2.6E+02 0.0088 21.7 22.9 189 123-317 24-239 (276)
372 3mez_A Mannose-specific lectin 21.8 1.7E+02 0.0058 18.9 7.9 81 217-308 19-100 (111)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7e-44 Score=296.32 Aligned_cols=274 Identities=13% Similarity=0.129 Sum_probs=237.7
Q ss_pred eEeecccceeEeeEeccCCcceeeeeeccccccccceeee----------c-CCCCCEEEEEEcCCCCeEEEEeeCCeEE
Q psy11524 38 LTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCRT----------L-NVSPPVYSAAWSPDSNKVLLTQAKSLVI 106 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v 106 (323)
..+++|.+.|.+++|+|++..-...+++++.|++.++|.. + .|...|.+++|+|++..+++++.+ +.|
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D-~~i 104 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLD-AHI 104 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETT-SEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCC-CcE
Confidence 4567999999999999875433356778877777776642 2 389999999999999999998877 599
Q ss_pred EEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEE
Q psy11524 107 KPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAV 183 (323)
Q Consensus 107 ~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 183 (323)
++||.... ...+..|...+.+++|+|++++|++++.|+.|+ +|+++ ++....+..+...+.+++|+|++++|++
T Consensus 105 ~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~---i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~las 181 (321)
T 3ow8_A 105 RLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVN---IFGVESGKKEYSLDTRGKFILSIAYSPDGKYLAS 181 (321)
T ss_dssp EEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEE---EEETTTCSEEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEE---EEEcCCCceeEEecCCCceEEEEEECCCCCEEEE
Confidence 99998765 566788888999999999999999999999999 99995 6777778888899999999999999999
Q ss_pred EeCC-eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccC
Q psy11524 184 GSYN-TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQT 260 (323)
Q Consensus 184 ~~~~-~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~ 260 (323)
++.| .|++||+++. .+..+.+|...|.+++|+|++++|++++.|+ |++||+++++...+ +.+|...|.+++|+|+
T Consensus 182 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~--~~~h~~~v~~~~~sp~ 259 (321)
T 3ow8_A 182 GAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGT--LSGHASWVLNVAFCPD 259 (321)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEE--ECCCSSCEEEEEECTT
T ss_pred EcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEE--EcCCCCceEEEEECCC
Confidence 9996 9999998754 5567788999999999999999999999999 99999999998887 7899999999999999
Q ss_pred CCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 261 GSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 261 g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
+ ..+++++.++.+++|++... .+..|...|.+++|+|+|++|++++.||.|++|++.
T Consensus 260 ~----~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 260 D----THFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp S----SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred C----CEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 8 88999999999999998765 455688999999999999999999999999999963
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.3e-43 Score=294.83 Aligned_cols=273 Identities=15% Similarity=0.162 Sum_probs=234.0
Q ss_pred eeeeeEeecccceeEeeEeccCCcceeeeeeccccccccceee--------ec-CCCCCEEEEEEcCCCCeEEEEeeCCe
Q psy11524 34 VKNHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCR--------TL-NVSPPVYSAAWSPDSNKVLLTQAKSL 104 (323)
Q Consensus 34 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~v~~~~~sp~~~~l~~~~~~~~ 104 (323)
+....++++|.+.|.++.|+|++. ++++++.|++.++|. .+ .|...|.+++|+|++++|++++.+ +
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~----~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d-~ 119 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSR----LLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLD-N 119 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSS----EEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETT-C
T ss_pred chhheeecCCCCceEEEEECCCCC----EEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCC-C
Confidence 345578999999999999999995 455555555555543 22 378899999999999999998877 6
Q ss_pred EEEEeCCCCc------eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecC
Q psy11524 105 VIKPLSPNNK------ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPG 177 (323)
Q Consensus 105 ~v~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~ 177 (323)
.+++|+.... ...+.+|.+.|.++.|++++. +++++.|++|+ +||++ ++.+..+.+|...|.+++|+|+
T Consensus 120 ~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~---~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 195 (340)
T 1got_B 120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCA---LWDIETGQQTTTFTGHTGDVMSLSLAPD 195 (340)
T ss_dssp EEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEE---EEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred eEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEE---EEECCCCcEEEEEcCCCCceEEEEECCC
Confidence 9999997643 345788999999999998765 88999999999 99996 6677788899999999999999
Q ss_pred CCEEEEEeCC-eEEEEeCCC-CeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEE
Q psy11524 178 GDMFAVGSYN-TLRLCDKVG-WSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQ 254 (323)
Q Consensus 178 ~~~l~~~~~~-~i~i~d~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~ 254 (323)
++++++++.| .|++||++. .....+.+|...|.+++|+|++++|++++.|+ |++||+++++.+..+....+...|.+
T Consensus 196 ~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~ 275 (340)
T 1got_B 196 TRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITS 275 (340)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred CCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEE
Confidence 9999999996 999999874 46667888999999999999999999999999 99999999888776433344568999
Q ss_pred EEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEE
Q psy11524 255 LAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGT 319 (323)
Q Consensus 255 ~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~ 319 (323)
++|+|++ ..++++..++.+.+|+.... ....|...|.+++|+|+|++|++|+.||.|++|+
T Consensus 276 ~~~s~~g----~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 276 VSFSKSG----RLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEECTTS----SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEECCCC----CEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9999999 89999999999999998654 4567899999999999999999999999999996
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-43 Score=304.85 Aligned_cols=270 Identities=15% Similarity=0.177 Sum_probs=236.6
Q ss_pred eeEeecccceeEeeEeccCCcceeeeeecccccccccee--------eecC-CCCCEEEEEEcCCCCeEEEEeeCCeEEE
Q psy11524 37 HLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLC--------RTLN-VSPPVYSAAWSPDSNKVLLTQAKSLVIK 107 (323)
Q Consensus 37 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~v~~~~~sp~~~~l~~~~~~~~~v~ 107 (323)
...+.+|.++|.++.|+|++.. +++++.|++.++| +.+. |...|.+++|+|++++|++|+.+ +.|+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~----l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D-~~i~ 175 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSV----MVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD-MTIK 175 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSE----EEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT-SCCC
T ss_pred eEeecccCCcEEEEEEcCCCCE----EEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC-CeEE
Confidence 3567899999999999999954 4455444444443 3443 89999999999999999998877 5999
Q ss_pred EeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEE
Q psy11524 108 PLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVG 184 (323)
Q Consensus 108 ~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 184 (323)
+||..+. ...+.+|...|.+++|+|++++|++++.|++|+ +||++ +..+..+.+|...|.+++|+|++.+|+++
T Consensus 176 iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~---~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~ 252 (410)
T 1vyh_C 176 LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIK---MWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASC 252 (410)
T ss_dssp EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEE---EEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEE---EEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEE
Confidence 9998765 567889999999999999999999999999999 99995 77788899999999999999999999999
Q ss_pred eCC-eEEEEeCCC-CeeeecCCCCccEEEEEEcCC--------------------CCEEEEEecCc-EEEEEcCCCceee
Q psy11524 185 SYN-TLRLCDKVG-WSHSLDKPDTGSVYDLVWSND--------------------ATQIAGACANV-IHIFDISSSSSSN 241 (323)
Q Consensus 185 ~~~-~i~i~d~~~-~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~d~-i~iwd~~~~~~~~ 241 (323)
+.| .|++||++. .....+..|...|.+++|+|+ |.+|++++.|+ |++||+++++++.
T Consensus 253 s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~ 332 (410)
T 1vyh_C 253 SNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLM 332 (410)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEE
T ss_pred cCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 997 999999875 455677789999999999996 67899999999 9999999999988
Q ss_pred eecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEE
Q psy11524 242 VTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLL 317 (323)
Q Consensus 242 ~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~ 317 (323)
. +.+|...|.+++|+|++ ..|+.++.++.+++|++... ....|...|.+++|+|++++|++|+.||+|++
T Consensus 333 ~--~~~h~~~v~~v~~~~~g----~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~v 406 (410)
T 1vyh_C 333 T--LVGHDNWVRGVLFHSGG----KFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKV 406 (410)
T ss_dssp E--EECCSSCEEEEEECSSS----SCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEE
T ss_pred E--EECCCCcEEEEEEcCCC----CEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 8 68899999999999998 88999999999999998764 44568899999999999999999999999999
Q ss_pred EEe
Q psy11524 318 GTI 320 (323)
Q Consensus 318 ~~l 320 (323)
|++
T Consensus 407 W~~ 409 (410)
T 1vyh_C 407 WEC 409 (410)
T ss_dssp EC-
T ss_pred EeC
Confidence 986
No 4
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.8e-42 Score=286.60 Aligned_cols=274 Identities=16% Similarity=0.179 Sum_probs=229.4
Q ss_pred eeeeeEeecccceeEeeEeccCCcceeeeeeccccccccceee-------------ec-CCCCCEEEEEEcCCCCeEEEE
Q psy11524 34 VKNHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCR-------------TL-NVSPPVYSAAWSPDSNKVLLT 99 (323)
Q Consensus 34 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-~~~~~v~~~~~sp~~~~l~~~ 99 (323)
+....++++|.+.|.+++|+|++. .+++++++|++.++|. .+ .|...|.+++|+|++++|+++
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~---~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQP---NLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSA 83 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCT---TEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEEEEccccceEEEEEccCCCc---cEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEE
Confidence 445567899999999999999752 3556666666666553 22 489999999999999999999
Q ss_pred eeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecC
Q psy11524 100 QAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPG 177 (323)
Q Consensus 100 ~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~ 177 (323)
+.| +.|++||.... ...+.+|...|.+++|+|++++|++++.|++|+ +||++++.+..+.+|...+.+++|+|.
T Consensus 84 s~D-~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~---vwd~~~~~~~~~~~h~~~v~~~~~~~~ 159 (319)
T 3frx_A 84 SWD-KTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIK---VWTIKGQCLATLLGHNDWVSQVRVVPN 159 (319)
T ss_dssp ETT-SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEE---EEETTSCEEEEECCCSSCEEEEEECCC
T ss_pred eCC-CEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEE---EEECCCCeEEEEeccCCcEEEEEEccC
Confidence 877 59999998766 667889999999999999999999999999999 999999999999999999999999985
Q ss_pred ------CCEEEEEeCC-eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCC
Q psy11524 178 ------GDMFAVGSYN-TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSH 248 (323)
Q Consensus 178 ------~~~l~~~~~~-~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~ 248 (323)
+..+++++.| .|++||++.. ....+.+|...|.+++|+|+|++|++++.|+ |++||+++++.+.. +. +
T Consensus 160 ~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~--~~-~ 236 (319)
T 3frx_A 160 EKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYT--LS-A 236 (319)
T ss_dssp ------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE--EE-C
T ss_pred CCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE--ec-C
Confidence 4479999997 9999999865 4456778999999999999999999999999 99999999998887 33 3
Q ss_pred ccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc------------cCCCCccceeEEEEeeCCCeeEeeecCCeEE
Q psy11524 249 SHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS------------LDKPDTGSVYDLVWSSDATQIAGACANGSLL 316 (323)
Q Consensus 249 ~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~------------~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~ 316 (323)
...+.+++|+|++ ..++.... ..+.+|++... ....|...+.+++|+|||++|++|+.||.|+
T Consensus 237 ~~~v~~~~~sp~~----~~la~~~~-~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~ 311 (319)
T 3frx_A 237 QDEVFSLAFSPNR----YWLAAATA-TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIR 311 (319)
T ss_dssp CSCEEEEEECSSS----SEEEEEET-TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCcEEEEEEcCCC----CEEEEEcC-CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEE
Confidence 4689999999998 56655543 34666665432 1123456799999999999999999999999
Q ss_pred EEEeec
Q psy11524 317 LGTIIQ 322 (323)
Q Consensus 317 ~~~l~~ 322 (323)
+|++.+
T Consensus 312 vWd~~t 317 (319)
T 3frx_A 312 VWQVMT 317 (319)
T ss_dssp EEEEEE
T ss_pred EEEEee
Confidence 999865
No 5
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-42 Score=289.87 Aligned_cols=275 Identities=16% Similarity=0.220 Sum_probs=226.7
Q ss_pred eeeeeEeecccc-eeEeeEeccCCcceeeeeeccccccccceee----------e--cCCCCCEEEEEEcCCCCeEEEEe
Q psy11524 34 VKNHLTIRRYDG-TVINYPISPYISVLHSYAASHSWPQALSLCR----------T--LNVSPPVYSAAWSPDSNKVLLTQ 100 (323)
Q Consensus 34 ~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~v~~~~~sp~~~~l~~~~ 100 (323)
+....++.+|.. .|.+++|+|+|..++ +++.|++.++|. . ..|...|.+++|+|+|++|++++
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g~~la----s~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s 80 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAGTLLA----SCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS 80 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTSSCEE----EEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEeeeecCCCCCcEEEEEECCCCCEEE----EEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE
Confidence 345567889987 999999999995554 444444444432 1 24889999999999999999998
Q ss_pred eCCeEEEEeCCCCc----eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCC----eeeEeecCCCceeEE
Q psy11524 101 AKSLVIKPLSPNNK----ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGR----QLYSSLTHDHPISSL 172 (323)
Q Consensus 101 ~~~~~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~----~~~~~~~~~~~v~~~ 172 (323)
.+ +.+++|+.... ...+.+|...|.+++|+|++++|++++.|++|+ +||++.. .+..+..|...|.++
T Consensus 81 ~D-~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~---iwd~~~~~~~~~~~~~~~h~~~v~~~ 156 (345)
T 3fm0_A 81 FD-ATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVW---VWEVDEEDEYECVSVLNSHTQDVKHV 156 (345)
T ss_dssp TT-SCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE---EEEECTTSCEEEEEEECCCCSCEEEE
T ss_pred CC-CcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEE---EEECCCCCCeEEEEEecCcCCCeEEE
Confidence 77 59999987653 456789999999999999999999999999999 9999532 345677899999999
Q ss_pred EEecCCCEEEEEeCC-eEEEEeCCCC---eeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCc---------
Q psy11524 173 AWAPGGDMFAVGSYN-TLRLCDKVGW---SHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSS--------- 238 (323)
Q Consensus 173 ~~~p~~~~l~~~~~~-~i~i~d~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~--------- 238 (323)
+|+|++++|++++.| .|++||.+.. ....+.+|...|.+++|+|+|++|++++.|+ |++||.....
T Consensus 157 ~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~ 236 (345)
T 3fm0_A 157 VWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSG 236 (345)
T ss_dssp EECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC-
T ss_pred EECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeec
Confidence 999999999999996 9999998754 2346778999999999999999999999999 9999964321
Q ss_pred ------eeeeecCCC-CccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-------------cCCCCccceeEEE
Q psy11524 239 ------SSNVTAPLS-HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-------------LDKPDTGSVYDLV 298 (323)
Q Consensus 239 ------~~~~~~~~~-~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~ 298 (323)
++.. +.+ |...|.+++|+|++ ..+++...++.+++|+.... ....|...|++++
T Consensus 237 ~~~~~~~~~~--~~~~h~~~v~~v~~~~~~----~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 310 (345)
T 3fm0_A 237 SDPSWKCICT--LSGFHSRTIYDIAWCQLT----GALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVA 310 (345)
T ss_dssp --CEEEEEEE--ECSSCSSCEEEEEECTTT----CCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEE
T ss_pred cCCccceeEE--ecCCCCCcEEEEEEecCC----CEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeE
Confidence 1222 233 77899999999998 88999999999999987542 2356889999999
Q ss_pred EeeCCC-eeEeeecCCeEEEEEeec
Q psy11524 299 WSSDAT-QIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 299 ~s~~g~-~l~s~~~dg~i~~~~l~~ 322 (323)
|+|++. +|++|+.||+|++|++.+
T Consensus 311 ~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 311 WNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp ECSSSTTEEEEEETTSCEEEEEECC
T ss_pred EeCCCceEEEEcCCCCcEEEEEecC
Confidence 999984 999999999999999865
No 6
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=4.8e-42 Score=289.21 Aligned_cols=273 Identities=14% Similarity=0.133 Sum_probs=234.2
Q ss_pred eeeeEeecccceeEeeEeccCCcceeeeeeccccccccceeeec---------CCCCCEEEEEEcCCCCeEEEEeeCCeE
Q psy11524 35 KNHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCRTL---------NVSPPVYSAAWSPDSNKVLLTQAKSLV 105 (323)
Q Consensus 35 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~sp~~~~l~~~~~~~~~ 105 (323)
.....+++|.+.|.++.|+|++. .+++++.|++.++|... .|...|.+++|+|+|+++++++.+ +.
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~----~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d-~~ 129 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKR----RIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLD-NK 129 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSS----EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTT-SE
T ss_pred EEEEEecCCCCeEEEEEECCCCC----EEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCC-CC
Confidence 45577899999999999999994 55666666666665422 267889999999999999998877 59
Q ss_pred EEEeCCCC--------ceeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEec
Q psy11524 106 IKPLSPNN--------KATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAP 176 (323)
Q Consensus 106 v~~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p 176 (323)
+++|+... ....+..|...|.+++|+|++..|++++.|++|+ +||++ ++.+..+.+|...|.+++|+|
T Consensus 130 i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~---lwd~~~~~~~~~~~~h~~~v~~~~~~~ 206 (354)
T 2pbi_B 130 CSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCA---LWDVESGQLLQSFHGHGADVLCLDLAP 206 (354)
T ss_dssp EEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEE---EEETTTCCEEEEEECCSSCEEEEEECC
T ss_pred EEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEE---EEeCCCCeEEEEEcCCCCCeEEEEEEe
Confidence 99997642 1456778999999999999999999999999999 99995 677888999999999999988
Q ss_pred --CCCEEEEEeCC-eEEEEeCCC-CeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccc
Q psy11524 177 --GGDMFAVGSYN-TLRLCDKVG-WSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHE 251 (323)
Q Consensus 177 --~~~~l~~~~~~-~i~i~d~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~ 251 (323)
++++|++++.| .|++||++. .....+..|...|.+++|+|++.+|++++.|+ |++||++.++.+..+....+...
T Consensus 207 ~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~ 286 (354)
T 2pbi_B 207 SETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFG 286 (354)
T ss_dssp CSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccc
Confidence 47899999996 999999874 46667788999999999999999999999999 99999999887766323334557
Q ss_pred eEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEE
Q psy11524 252 ITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGT 319 (323)
Q Consensus 252 v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~ 319 (323)
+.+++|+|++ ..++++..++.+++|++... ....|...|.+++|+|+|++|++|+.||+|++|+
T Consensus 287 ~~~~~~s~~g----~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 287 ASSVDFSLSG----RLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEEEECTTS----SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eeEEEEeCCC----CEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 8999999999 89999999999999998654 4567899999999999999999999999999995
No 7
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3e-42 Score=288.71 Aligned_cols=272 Identities=18% Similarity=0.162 Sum_probs=217.4
Q ss_pred ecccceeEeeEeccCCcceeeeeec--ccccccccee-------------eecCCCCCEEEEEEcCCCCeEEEEeeCCeE
Q psy11524 41 RRYDGTVINYPISPYISVLHSYAAS--HSWPQALSLC-------------RTLNVSPPVYSAAWSPDSNKVLLTQAKSLV 105 (323)
Q Consensus 41 ~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-------------~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~ 105 (323)
..|...|.++.|+|||..++..... ..|+.....+ ..+.+...|.+++|+|++ .|++++.+ +.
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~d-g~ 104 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDS-GA 104 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETT-SE
T ss_pred ccccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECC-CE
Confidence 4577889999999999766533211 1355433222 122356789999999986 57777666 69
Q ss_pred EEEeCCCCc--e----eEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCC
Q psy11524 106 IKPLSPNNK--A----TKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGG 178 (323)
Q Consensus 106 v~~~~~~~~--~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~ 178 (323)
|++||.... . ....+|.+.|.+++|+|+|++|++++.|++|+ +||++ ++.+..+.+|...|.+++|+|++
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~---iwd~~~~~~~~~~~~h~~~V~~~~~~~~~ 181 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIK---VWDLAQQVVLSSYRAHAAQVTCVAASPHK 181 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE---EEETTTTEEEEEECCCSSCEEEEEECSSC
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEE---EEECCCCcEEEEEcCcCCceEEEEecCCC
Confidence 999997654 2 23458999999999999999999999999999 99996 67778889999999999999987
Q ss_pred C-EEEEEeCC-eEEEEeCCCC-eeeec--CCCCccEEEEEEcC-CCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccc
Q psy11524 179 D-MFAVGSYN-TLRLCDKVGW-SHSLD--KPDTGSVYDLVWSN-DATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHE 251 (323)
Q Consensus 179 ~-~l~~~~~~-~i~i~d~~~~-~~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~ 251 (323)
. +|++++.| +|++||++.. ....+ ..+...+.+++|+| ++++|++++.|+ |++||+++++++.+ +.+|...
T Consensus 182 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~--~~~h~~~ 259 (344)
T 4gqb_B 182 DSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLS--SAVHSQC 259 (344)
T ss_dssp TTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEE--EECCSSC
T ss_pred CCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEE--EcCCCCC
Confidence 5 68889886 9999998754 33333 33556799999999 466889999999 99999999999988 7899999
Q ss_pred eEEEEEccCCCCccceEEEEeCCCCeEEEecccc---cCCCCccceeEEEEeeCCC-eeEeeecCCeEEEEEeec
Q psy11524 252 ITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS---LDKPDTGSVYDLVWSSDAT-QIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 252 v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~-~l~s~~~dg~i~~~~l~~ 322 (323)
|++++|+|++. .+|+.++.|+.+++|+.... ....|.+.|++++|+|+++ +|++++.||+|++|++.+
T Consensus 260 v~~v~fsp~g~---~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 260 VTGLVFSPHSV---PFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EEEEEECSSSS---CCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEEEEEccCCC---eEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 99999999972 57888999999999998765 4567899999999999987 567999999999999854
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.7e-42 Score=289.51 Aligned_cols=272 Identities=17% Similarity=0.204 Sum_probs=219.8
Q ss_pred eecccceeEeeEeccCCcceeeeeecc--ccccccceee-------------ecCCCCCEEEEEEcCCCCeEEEEeeCCe
Q psy11524 40 IRRYDGTVINYPISPYISVLHSYAASH--SWPQALSLCR-------------TLNVSPPVYSAAWSPDSNKVLLTQAKSL 104 (323)
Q Consensus 40 ~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-------------~~~~~~~v~~~~~sp~~~~l~~~~~~~~ 104 (323)
...|+..|.+++|+|||+.+++..... .||....++. ..+|...|++++|+|+++++ +++.+ +
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l-~~s~d-g 115 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGIL-VASDS-G 115 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEE-EEETT-S
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEE-EEECC-C
Confidence 457999999999999997776554332 3666555442 22488899999999998655 45555 6
Q ss_pred EEEEeCCCCc------eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecC
Q psy11524 105 VIKPLSPNNK------ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPG 177 (323)
Q Consensus 105 ~v~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~ 177 (323)
.|++||.... .....+|...|.+++|+|++++|++++.|+.|+ +||++ ++.+..+..|...|.+++|+|+
T Consensus 116 ~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~---iwd~~~~~~~~~~~~h~~~v~~v~~s~~ 192 (357)
T 4g56_B 116 AVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVK---VWDLSQKAVLKSYNAHSSEVNCVAACPG 192 (357)
T ss_dssp CEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEE---EEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred EEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEE---EEECCCCcEEEEEcCCCCCEEEEEEccC
Confidence 9999998654 123457999999999999999999999999999 99996 6677788899999999999998
Q ss_pred CC-EEEEEeCC-eEEEEeCCCC-eee--ecCCCCccEEEEEEcCC-CCEEEEEecCc-EEEEEcCCCceeeeecCCCCcc
Q psy11524 178 GD-MFAVGSYN-TLRLCDKVGW-SHS--LDKPDTGSVYDLVWSND-ATQIAGACANV-IHIFDISSSSSSNVTAPLSHSH 250 (323)
Q Consensus 178 ~~-~l~~~~~~-~i~i~d~~~~-~~~--~~~~~~~~v~~~~~~~~-~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~ 250 (323)
+. ++++++.| .|++||++.. ... ....+...+.+++|+|+ +.+|++++.|+ |++||+++++.+.. +..|..
T Consensus 193 ~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~--~~~~~~ 270 (357)
T 4g56_B 193 KDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQT--SAVHSQ 270 (357)
T ss_dssp CSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEE--ECCCSS
T ss_pred CCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEE--Eeccce
Confidence 75 68888886 9999998754 332 23346778999999997 56888999999 99999999998888 788999
Q ss_pred ceEEEEEccCCCCccceEEEEeCCCCeEEEecccc---cCCCCccceeEEEEee-CCCeeEeeecCCeEEEEEee
Q psy11524 251 EITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS---LDKPDTGSVYDLVWSS-DATQIAGACANGSLLLGTII 321 (323)
Q Consensus 251 ~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~-~g~~l~s~~~dg~i~~~~l~ 321 (323)
.|++++|+|++. ..|+.++.++.+++|++... ....|...|++++|+| ++++|++++.||+|++|++.
T Consensus 271 ~v~~l~~sp~~~---~~lasgs~D~~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 271 NITGLAYSYHSS---PFLASISEDCTVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp CEEEEEECSSSS---CCEEEEETTSCEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred eEEEEEEcCCCC---CEEEEEeCCCEEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 999999999872 57888899999999998765 2335889999999999 79999999999999999984
No 9
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.1e-41 Score=281.90 Aligned_cols=273 Identities=16% Similarity=0.172 Sum_probs=223.8
Q ss_pred eeeeeEeecccceeEeeEe-----cc-CCcceeeeeeccccccccceeee---------------c-CCCCCEEEEEEcC
Q psy11524 34 VKNHLTIRRYDGTVINYPI-----SP-YISVLHSYAASHSWPQALSLCRT---------------L-NVSPPVYSAAWSP 91 (323)
Q Consensus 34 ~~~~~~~~~~~~~v~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~---------------~-~~~~~v~~~~~sp 91 (323)
+.....+++|.+.|.++.| +| ++ .++++++.|++.++|.. + .|...|.+++|+|
T Consensus 11 ~~~~~~l~gH~~~V~~~~~~~s~~~~~d~----~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~ 86 (343)
T 2xzm_R 11 VVKRGILEGHSDWVTSIVAGFSQKENEDS----PVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ 86 (343)
T ss_dssp EEEEEEEECCSSCEEEEEECCCSSTTCCC----CEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS
T ss_pred eeeeeeeccchhhhhheeeEEEeecCCCC----CEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC
Confidence 3445678999999999999 66 77 45566666665555532 2 3889999999999
Q ss_pred CCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEee---cCC
Q psy11524 92 DSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSL---THD 166 (323)
Q Consensus 92 ~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~---~~~ 166 (323)
++.++++++.| +.|++||.... ...+.+|...|.+++|+|++++|++++.|++|+ +||+.+....... .|.
T Consensus 87 ~~~~l~s~s~D-~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~---~wd~~~~~~~~~~~~~~~~ 162 (343)
T 2xzm_R 87 ENCFAISSSWD-KTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIK---LWNILGECKFSSAEKENHS 162 (343)
T ss_dssp STTEEEEEETT-SEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEE---EEESSSCEEEECCTTTSCS
T ss_pred CCCEEEEEcCC-CcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEE---EEeccCCceeeeecccCCC
Confidence 99999998877 59999998765 667889999999999999999999999999999 9999866555444 678
Q ss_pred CceeEEEEecCC----------CEEEEEeCC-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEc
Q psy11524 167 HPISSLAWAPGG----------DMFAVGSYN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDI 234 (323)
Q Consensus 167 ~~v~~~~~~p~~----------~~l~~~~~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~ 234 (323)
..|.+++|+|++ .+|++++.| .|++||.+......+..|...|.+++|+|+|++|++++.|+ |++||+
T Consensus 163 ~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~ 242 (343)
T 2xzm_R 163 DWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDI 242 (343)
T ss_dssp SCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEES
T ss_pred ceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 889999999986 689999996 99999976666667778999999999999999999999999 999999
Q ss_pred CC-CceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc------cC-----------CCCccceeE
Q psy11524 235 SS-SSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS------LD-----------KPDTGSVYD 296 (323)
Q Consensus 235 ~~-~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~------~~-----------~~~~~~v~~ 296 (323)
.. ...... ..+...|.+++|+|++ ..++. ..++.+++|++... .. ..|...|.+
T Consensus 243 ~~~~~~~~~---~~~~~~v~~v~~sp~~----~~la~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 314 (343)
T 2xzm_R 243 LNLTYPQRE---FDAGSTINQIAFNPKL----QWVAV-GTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTS 314 (343)
T ss_dssp SCCSSCSEE---EECSSCEEEEEECSSS----CEEEE-EESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEE
T ss_pred CCCccccee---ecCCCcEEEEEECCCC----CEEEE-ECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEE
Confidence 54 333333 2345679999999997 55554 45677888887543 01 256778999
Q ss_pred EEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 297 LVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 297 ~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
++|+|+|++|++|+.||.|++|++.+
T Consensus 315 ~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 315 LAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp EEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred EEECCCCCeEEEecCCceEEEEEEEc
Confidence 99999999999999999999999854
No 10
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.7e-41 Score=303.92 Aligned_cols=272 Identities=20% Similarity=0.296 Sum_probs=238.9
Q ss_pred eeEeecccceeEeeEeccCCcceeeeeecc---ccccccceeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCC
Q psy11524 37 HLTIRRYDGTVINYPISPYISVLHSYAASH---SWPQALSLCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPN 112 (323)
Q Consensus 37 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~ 112 (323)
...+.+|...|.++.|+|++..++....++ .|+...+....+ .|...|.+++|+|+|++|++++.+ +.+++|+..
T Consensus 296 ~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-g~v~~~~~~ 374 (577)
T 2ymu_A 296 LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDD-KTVKLWNRN 374 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEETT
T ss_pred EEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCC-CEEEEEcCC
Confidence 356788999999999999997665544443 355443333333 488999999999999999988776 699999987
Q ss_pred Cc-eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEE
Q psy11524 113 NK-ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLR 190 (323)
Q Consensus 113 ~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~ 190 (323)
.. ...+..|...|.+++|+|++++|++++.|+.|+ +||.+++.+..+..|...|.+++|+|++++|++++.| .|+
T Consensus 375 ~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~---~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~ 451 (577)
T 2ymu_A 375 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK---LWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVK 451 (577)
T ss_dssp CCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEE---EECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEE---EEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEE
Confidence 66 667889999999999999999999999999999 9999999999999999999999999999999999997 999
Q ss_pred EEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEE
Q psy11524 191 LCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVA 269 (323)
Q Consensus 191 i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~ 269 (323)
+||..+.....+.+|...|.+++|+|++++|++++.|+ |++|| .+++.+.. +.+|...|++++|+|++ .+|+
T Consensus 452 ~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~-~~~~~~~~--~~~h~~~v~~l~~s~dg----~~l~ 524 (577)
T 2ymu_A 452 LWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN-RNGQLLQT--LTGHSSSVRGVAFSPDG----QTIA 524 (577)
T ss_dssp EEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEE-TTSCEEEE--EECCSSCEEEEEECTTS----SCEE
T ss_pred EEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEc-CCCCEEEE--EeCCCCCEEEEEEcCCC----CEEE
Confidence 99998888888888999999999999999999999999 99999 46777777 68899999999999999 7888
Q ss_pred EEeCCCCeEEEecccc---cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEE
Q psy11524 270 FIDKNRDLYLSMWSHS---LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGT 319 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~ 319 (323)
+++.++.+++|+.... ....|...|++++|+|||++|++++.|++|++|+
T Consensus 525 s~~~dg~v~lwd~~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 525 SASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEECcCEEEEEeCCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9999999999986543 4567899999999999999999999999999996
No 11
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.3e-40 Score=274.78 Aligned_cols=271 Identities=16% Similarity=0.200 Sum_probs=226.0
Q ss_pred eeeEeecccceeEeeEeccCCcceeeeeecccccccccee--------eec-CCCCCEEEEEEcCCCCeEEEEeeCCeEE
Q psy11524 36 NHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLC--------RTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVI 106 (323)
Q Consensus 36 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v 106 (323)
...++++|.+.|.+++|+|++..+ +++++|++.++| +.+ .|..+|.+++|+|++++|++++.+ +.|
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l----~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-~~i 79 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWV----LTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-FRI 79 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEE----EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-SEE
T ss_pred eEEeecCCCCceEEEEECCCCCEE----EEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCC-CEE
Confidence 346788999999999999999544 445444444444 333 378899999999999999999877 599
Q ss_pred EEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCC--CeeeEeecCCCceeEEEEec-CCCEE
Q psy11524 107 KPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG--RQLYSSLTHDHPISSLAWAP-GGDMF 181 (323)
Q Consensus 107 ~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~--~~~~~~~~~~~~v~~~~~~p-~~~~l 181 (323)
++||.... ...+.+|...|.+++|+|++++|++++.|++|+ +||++. .....+.+|...|.+++|+| ++..|
T Consensus 80 ~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~---lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 80 RVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK---LWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp EEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEE---EEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEE
T ss_pred EEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEE---EEECCCCcchhhhhcccCCcEEEEEECCCCCCEE
Confidence 99998765 677889999999999999999999999999999 999963 34456788999999999999 67899
Q ss_pred EEEeCC-eEEEEeCCCC--eeeecCCCCccEEEEEEcC--CCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEE
Q psy11524 182 AVGSYN-TLRLCDKVGW--SHSLDKPDTGSVYDLVWSN--DATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQL 255 (323)
Q Consensus 182 ~~~~~~-~i~i~d~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~ 255 (323)
++++.| .|++||++.. .......+...+..++|+| ++.+|++++.|+ |++||+++++++.+ +.+|...|..+
T Consensus 157 ~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~--~~~h~~~v~~~ 234 (304)
T 2ynn_A 157 ASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT--LEGHMSNVSFA 234 (304)
T ss_dssp EEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEE--EECCSSCEEEE
T ss_pred EEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcccee--eCCCCCCEEEE
Confidence 999997 9999998743 2334455677899999987 778999999999 99999999999888 78999999999
Q ss_pred EEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCC--eeEeeecCCeEEEEEee
Q psy11524 256 AVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDAT--QIAGACANGSLLLGTII 321 (323)
Q Consensus 256 ~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~--~l~s~~~dg~i~~~~l~ 321 (323)
+|+|++ ..|+.++.++.+++|+.... ....|...+.+++|+|+++ ++++|++|| +.+|++.
T Consensus 235 ~~~p~~----~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~ 301 (304)
T 2ynn_A 235 VFHPTL----PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLG 301 (304)
T ss_dssp EECSSS----SEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC
T ss_pred EECCCC----CEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEec
Confidence 999998 78999999999999998764 4456678999999999986 467776555 5666664
No 12
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-40 Score=278.41 Aligned_cols=271 Identities=13% Similarity=0.229 Sum_probs=214.1
Q ss_pred eeeeEeecccceeEeeEeccCCcceeeeeeccccccccce----------eeec--C-CCCCEEEEEEcCCCCeEEEEee
Q psy11524 35 KNHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSL----------CRTL--N-VSPPVYSAAWSPDSNKVLLTQA 101 (323)
Q Consensus 35 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~--~-~~~~v~~~~~sp~~~~l~~~~~ 101 (323)
.....+++|.+.|.++.|+|+ . +++++.|++.++ ...+ . |...|.+++|+|++++|++++.
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~----las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~ 78 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--I----LATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF 78 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--E----EEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET
T ss_pred ccceeeccCCCceeeeccCCC--E----EEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC
Confidence 445678899999999999987 3 444443433333 2333 3 8899999999999999999987
Q ss_pred CCeEEEEeCCCC---------ceeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-C----CeeeEeecCCC
Q psy11524 102 KSLVIKPLSPNN---------KATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-G----RQLYSSLTHDH 167 (323)
Q Consensus 102 ~~~~v~~~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~----~~~~~~~~~~~ 167 (323)
+ +.|++|+... ....+.+|...|.+++|+|++++|++++.|++|+ +||++ . +.+..+.+|..
T Consensus 79 D-~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~---iwd~~~~~~~~~~~~~~~~h~~ 154 (330)
T 2hes_X 79 D-STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVW---IWETDESGEEYECISVLQEHSQ 154 (330)
T ss_dssp T-SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEE---EEECCTTCCCCEEEEEECCCSS
T ss_pred C-CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEE---EEeccCCCCCeEEEEEeccCCC
Confidence 7 5999998742 1456788999999999999999999999999999 99993 2 34566788999
Q ss_pred ceeEEEEecCCCEEEEEeCC-eEEEEeCCCC---eeeecCCCCccEEEEEEcCC--CCEEEEEecCc-EEEEEcCCC---
Q psy11524 168 PISSLAWAPGGDMFAVGSYN-TLRLCDKVGW---SHSLDKPDTGSVYDLVWSND--ATQIAGACANV-IHIFDISSS--- 237 (323)
Q Consensus 168 ~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~---~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~-i~iwd~~~~--- 237 (323)
.|.+++|+|++.+|++++.| +|++||.... .+..+.+|...|.+++|+|+ +.+|++++.|+ |++||++.+
T Consensus 155 ~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~ 234 (330)
T 2hes_X 155 DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDED 234 (330)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTT
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcc
Confidence 99999999999999999997 9999997643 45677889999999999998 77899999999 999998754
Q ss_pred -----ceeeeecCCC-CccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-------cCCCCcc-ceeEEEEee--
Q psy11524 238 -----SSSNVTAPLS-HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-------LDKPDTG-SVYDLVWSS-- 301 (323)
Q Consensus 238 -----~~~~~~~~~~-~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-------~~~~~~~-~v~~~~~s~-- 301 (323)
..... +.. |...|.+++|+++ +.++.+..++.+.+|+.... ....|.. .|.+++|+|
T Consensus 235 ~~~~~~~~~~--~~~~h~~~v~~v~~s~~-----~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~ 307 (330)
T 2hes_X 235 DQQEWVCEAI--LPDVHKRQVYNVAWGFN-----GLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELN 307 (330)
T ss_dssp SCEEEEEEEE--CCSCCSSCEEEEEECTT-----SCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC---
T ss_pred ccceeEEeee--cccccccceEEEEEcCC-----CEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCC
Confidence 23333 444 8899999999976 57888889999999987542 2345666 899999999
Q ss_pred CCCeeEeeecCCeEEEEEeec
Q psy11524 302 DATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 302 ~g~~l~s~~~dg~i~~~~l~~ 322 (323)
++++|++|+.||+|++|++.+
T Consensus 308 ~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 308 GKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp --CCEEEEETTSEEEEEEC--
T ss_pred CceEEEEecCCCcEEEEEecc
Confidence 789999999999999999864
No 13
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.9e-42 Score=291.51 Aligned_cols=276 Identities=18% Similarity=0.223 Sum_probs=229.6
Q ss_pred eeeeEeecccceeEeeEeccCCcceeeeeeccccccccceeee--------c-CCCCCEEEEEEcCCCCeEEEEeeCCeE
Q psy11524 35 KNHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCRT--------L-NVSPPVYSAAWSPDSNKVLLTQAKSLV 105 (323)
Q Consensus 35 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~v~~~~~sp~~~~l~~~~~~~~~ 105 (323)
....++++|.+.|.++.|+|++. ++++++.|++.++|.. + .|...|.+++|+|+|++|++++.+ +.
T Consensus 57 ~~~~~l~gH~~~V~~~~~sp~~~----~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d-~~ 131 (380)
T 3iz6_a 57 VCCRTLQGHSGKVYSLDWTPEKN----WIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLD-SA 131 (380)
T ss_dssp EEEEEECCCSSCEEEEEECTTSS----CEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSS-SC
T ss_pred EEeecccccccEEEEEEEcCCCC----EEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCC-Cc
Confidence 34567899999999999999994 5556666666555542 2 388899999999999999998877 59
Q ss_pred EEEeCCCCc---------eeEeeccCCCeEEEEECCC-CCEEEEEcCCCceEeeeEEeCC-CCeeeEe-----ecCCCce
Q psy11524 106 IKPLSPNNK---------ATKWQAHDGLILKVAWCSS-TDLILSGGEDCKYKASFVWDTD-GRQLYSS-----LTHDHPI 169 (323)
Q Consensus 106 v~~~~~~~~---------~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~-----~~~~~~v 169 (323)
+++|+.... ...+.+|.+.+.++.|+|+ +..|++++.|++|+ +||++ ++.+..+ .+|...|
T Consensus 132 v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~---~wd~~~~~~~~~~~~~~~~~h~~~v 208 (380)
T 3iz6_a 132 CSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCV---LWDVTTGQRISIFGSEFPSGHTADV 208 (380)
T ss_dssp CEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEE---EECTTTCCEEEEECCCSSSSCCSCE
T ss_pred EEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEE---EEEcCCCcEEEEeecccCCCCccCe
Confidence 999987532 3457889999999999997 45799999999999 99996 5555555 5688899
Q ss_pred eEEEEec-CCCEEEEEeCC-eEEEEeCC--CCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeec
Q psy11524 170 SSLAWAP-GGDMFAVGSYN-TLRLCDKV--GWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTA 244 (323)
Q Consensus 170 ~~~~~~p-~~~~l~~~~~~-~i~i~d~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~ 244 (323)
.+++|+| ++++|++|+.| .|++||++ ......+.+|...|.+++|+|++++|++++.|+ |++||+++++.+..+.
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~ 288 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN 288 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec
Confidence 9999987 78999999997 99999986 345667788999999999999999999999999 9999999998877632
Q ss_pred CCC-----CccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc--------cCCCCccceeEEEEeeCCCeeEeeec
Q psy11524 245 PLS-----HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS--------LDKPDTGSVYDLVWSSDATQIAGACA 311 (323)
Q Consensus 245 ~~~-----~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~s~~g~~l~s~~~ 311 (323)
... +...+.+++|+|+| ..++.+..++.+.+|+.... ....|...|.+++|+|+|++|++|+.
T Consensus 289 ~~~~~~~~~~~~v~~~~~s~~g----~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~ 364 (380)
T 3iz6_a 289 REPDRNDNELPIVTSVAFSISG----RLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSW 364 (380)
T ss_dssp CCCSSSCCSSCSCSEEEECSSS----SEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECT
T ss_pred ccccccccccCceEEEEECCCC----CEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeC
Confidence 211 22358999999999 88999999999999987543 23568999999999999999999999
Q ss_pred CCeEEEEEeec
Q psy11524 312 NGSLLLGTIIQ 322 (323)
Q Consensus 312 dg~i~~~~l~~ 322 (323)
||+|++|++..
T Consensus 365 D~~i~iW~~~~ 375 (380)
T 3iz6_a 365 DKNLKIWAFSG 375 (380)
T ss_dssp TSCEEEEECCS
T ss_pred CCCEEEEecCC
Confidence 99999999854
No 14
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.2e-39 Score=276.83 Aligned_cols=272 Identities=17% Similarity=0.210 Sum_probs=218.2
Q ss_pred ecccceeEeeEeccCCcceeeeeecc--ccc-cccceeeecC-------------------CCCCEEEEEEcCCCCeEEE
Q psy11524 41 RRYDGTVINYPISPYISVLHSYAASH--SWP-QALSLCRTLN-------------------VSPPVYSAAWSPDSNKVLL 98 (323)
Q Consensus 41 ~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~-------------------~~~~v~~~~~sp~~~~l~~ 98 (323)
.+|.+.|.++.|+|+|+.++...... .|+ .+.++...+. +...|.+++|+|+|++|++
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 36999999999999997665432111 233 2222222232 1224999999999999999
Q ss_pred EeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEec
Q psy11524 99 TQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAP 176 (323)
Q Consensus 99 ~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p 176 (323)
++.+ +.|++||.... ...+.+|...|.+++|+|++++|++++.|++|+ +||++.........+...+.+++|+|
T Consensus 141 ~~~d-~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~---iwd~~~~~~~~~~~~~~~v~~~~~~~ 216 (393)
T 1erj_A 141 GAED-RLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVR---IWDLRTGQCSLTLSIEDGVTTVAVSP 216 (393)
T ss_dssp EETT-SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE---EEETTTTEEEEEEECSSCEEEEEECS
T ss_pred EcCC-CeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEE---EEECCCCeeEEEEEcCCCcEEEEEEC
Confidence 8877 59999998765 567889999999999999999999999999999 99997554444444667899999999
Q ss_pred -CCCEEEEEeCC-eEEEEeCCCC-eeeec-------CCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCc-------
Q psy11524 177 -GGDMFAVGSYN-TLRLCDKVGW-SHSLD-------KPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSS------- 238 (323)
Q Consensus 177 -~~~~l~~~~~~-~i~i~d~~~~-~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~------- 238 (323)
++++|++++.| .|++||++.. ....+ .+|...|.+++|+|+|++|++++.|+ |++||+++..
T Consensus 217 ~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 217 GDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 89999999996 9999998754 33332 56889999999999999999999999 9999987643
Q ss_pred -----eeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEee------CC
Q psy11524 239 -----SSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSS------DA 303 (323)
Q Consensus 239 -----~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~------~g 303 (323)
+... +.+|...|.+++|+|++ ..|+.++.++.+++|+.... ....|...|.+++|++ ++
T Consensus 297 ~~~~~~~~~--~~~h~~~v~~~~~~~~~----~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~ 370 (393)
T 1erj_A 297 PNSGTCEVT--YIGHKDFVLSVATTQND----EYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY 370 (393)
T ss_dssp ----CEEEE--EECCSSCEEEEEECGGG----CEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTC
T ss_pred CCCCcceEE--EecccCcEEEEEECCCC----CEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCC
Confidence 2333 56788999999999998 78999999999999998765 4567899999999986 68
Q ss_pred CeeEeeecCCeEEEEEeec
Q psy11524 304 TQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 304 ~~l~s~~~dg~i~~~~l~~ 322 (323)
++|++|+.||+|++|++..
T Consensus 371 ~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 371 NVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEEEEETTSEEEEEEEEE
T ss_pred CEEEEECCCCcEEECcccc
Confidence 8999999999999999854
No 15
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1e-39 Score=292.40 Aligned_cols=273 Identities=21% Similarity=0.303 Sum_probs=239.5
Q ss_pred eeEeecccceeEeeEeccCCcceeeeeecc---ccccccceeeecC-CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCC
Q psy11524 37 HLTIRRYDGTVINYPISPYISVLHSYAASH---SWPQALSLCRTLN-VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPN 112 (323)
Q Consensus 37 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~ 112 (323)
...+.+|...|.++.|+|++..++....++ .|+...+..+.+. |...|.+++|+|+++.+++++.+ +.+++|+..
T Consensus 255 ~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d-~~i~~w~~~ 333 (577)
T 2ymu_A 255 LQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDD-KTVKLWNRN 333 (577)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETT-SCEEEEETT
T ss_pred EEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCC-CeEEEEeCC
Confidence 456788999999999999997665544433 3665555555554 89999999999999999998777 599999987
Q ss_pred Cc-eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEE
Q psy11524 113 NK-ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLR 190 (323)
Q Consensus 113 ~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~ 190 (323)
.. ...+..|...+.+++|+|++++|++++.|+.++ +||.+++.+..+..|...|.+++|+|++++|++++.| .|+
T Consensus 334 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~---~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~ 410 (577)
T 2ymu_A 334 GQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK---LWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 410 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE---EEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred CCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEE---EEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEE
Confidence 76 667889999999999999999999999999999 9999999999999999999999999999999999996 999
Q ss_pred EEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEE
Q psy11524 191 LCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVA 269 (323)
Q Consensus 191 i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~ 269 (323)
+||..+.....+..|...|.+++|+|++++|++++.|+ |++||. +++.+.. +.+|...|.+++|+|++ ..|+
T Consensus 411 ~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~--~~~~~~~v~~~~~spd~----~~la 483 (577)
T 2ymu_A 411 LWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQT--LTGHSSSVRGVAFSPDG----QTIA 483 (577)
T ss_dssp EECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEE--EECCSSCEEEEEECTTS----CEEE
T ss_pred EEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEE--EcCCCCCEEEEEEcCCC----CEEE
Confidence 99988887788888999999999999999999999999 999995 5666666 67899999999999999 7888
Q ss_pred EEeCCCCeEEEecccc---cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 270 FIDKNRDLYLSMWSHS---LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
+.+.++.+++|+.... ....|...|++++|+|+|++|++++.||.|++|+.
T Consensus 484 s~~~d~~i~iw~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 484 SASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp EEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EEeCCCEEEEEcCCCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 8888888888886543 44568899999999999999999999999999985
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.3e-39 Score=291.73 Aligned_cols=274 Identities=18% Similarity=0.224 Sum_probs=231.1
Q ss_pred eeeEeecccceeEeeEeccCCcceeeeeeccccccccceeee----------c-CCCCCEEEEEEcCCCCeEEEEeeCC-
Q psy11524 36 NHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCRT----------L-NVSPPVYSAAWSPDSNKVLLTQAKS- 103 (323)
Q Consensus 36 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~~~~~v~~~~~sp~~~~l~~~~~~~- 103 (323)
....+.+|...|.+++|+|+|+ ++++++.|++.++|.. + .|..+|.+++|+|+|++|++++.++
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~----~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~ 126 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGY----YCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRE 126 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSS----EEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSS
T ss_pred cCeEecCCCCceEEEEECCCCc----EEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCC
Confidence 3456889999999999999995 5555555555554432 2 3789999999999999999887653
Q ss_pred --eEEEEeCCCCceeEeeccCCCeEEEEECCCCC-EEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCC
Q psy11524 104 --LVIKPLSPNNKATKWQAHDGLILKVAWCSSTD-LILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGD 179 (323)
Q Consensus 104 --~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~ 179 (323)
+.|++|+.......+.+|...|.+++|+|++. .|++++.|++|+ +||.. .+....+.+|...|.+++|+|+|+
T Consensus 127 ~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~---lwd~~~~~~~~~l~~H~~~V~~v~fspdg~ 203 (611)
T 1nr0_A 127 RFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVA---IFEGPPFKFKSTFGEHTKFVHSVRYNPDGS 203 (611)
T ss_dssp CSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEE---EEETTTBEEEEEECCCSSCEEEEEECTTSS
T ss_pred ceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEE---EEECCCCeEeeeeccccCceEEEEECCCCC
Confidence 68999998777778899999999999999986 699999999999 99985 566678889999999999999999
Q ss_pred EEEEEeCC-eEEEEeCCC-CeeeecC-------CCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeec-----
Q psy11524 180 MFAVGSYN-TLRLCDKVG-WSHSLDK-------PDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTA----- 244 (323)
Q Consensus 180 ~l~~~~~~-~i~i~d~~~-~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~----- 244 (323)
+|++++.| +|++||+.. .....+. +|.+.|.+++|+|+|++|++++.|+ |++||+++++.+.++.
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~ 283 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI 283 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc
Confidence 99999997 999999764 4444442 6999999999999999999999999 9999998876544321
Q ss_pred ------------------------------------CCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc---
Q psy11524 245 ------------------------------------PLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS--- 285 (323)
Q Consensus 245 ------------------------------------~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~--- 285 (323)
+.+|...|.+++|+|++ ..|++.+.++.+++|++...
T Consensus 284 ~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg----~~l~s~s~D~~v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 284 EDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG----KTLFSADAEGHINSWDISTGISN 359 (611)
T ss_dssp GGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTCCEE
T ss_pred cceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC----CEEEEEeCCCcEEEEECCCCcee
Confidence 34788899999999999 89999999999999998764
Q ss_pred --cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 286 --LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 286 --~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
....|...|.+++|++++ .|++++.|+.+++|++.
T Consensus 360 ~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w~~~ 396 (611)
T 1nr0_A 360 RVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVVPAG 396 (611)
T ss_dssp ECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEECSS
T ss_pred eecccCCcceEEEEEECCCC-cEEEEEcCCceEEeecC
Confidence 225688999999999776 78899999999999853
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.6e-39 Score=292.85 Aligned_cols=271 Identities=15% Similarity=0.180 Sum_probs=219.2
Q ss_pred eeEeecccceeEeeEeccCCcceeeeeeccccccccceee--------ec--------CCCCCEEEEEEcCCCCeEEEEe
Q psy11524 37 HLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCR--------TL--------NVSPPVYSAAWSPDSNKVLLTQ 100 (323)
Q Consensus 37 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~--------~~~~~v~~~~~sp~~~~l~~~~ 100 (323)
...+.+|...|.+++|+|+++. +++++.|++.++|. .+ .|...|.+++|+|+|++|++++
T Consensus 183 ~~~l~~H~~~V~~v~fspdg~~----las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 183 KSTFGEHTKFVHSVRYNPDGSL----FASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp EEEECCCSSCEEEEEECTTSSE----EEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred eeeeccccCceEEEEECCCCCE----EEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEe
Confidence 4568899999999999999954 45555455444442 33 5899999999999999999998
Q ss_pred eCCeEEEEeCCCCc--e-------------------------------------------eEeeccCCCeEEEEECCCCC
Q psy11524 101 AKSLVIKPLSPNNK--A-------------------------------------------TKWQAHDGLILKVAWCSSTD 135 (323)
Q Consensus 101 ~~~~~v~~~~~~~~--~-------------------------------------------~~~~~~~~~v~~~~~~~~~~ 135 (323)
.| +.|++||.... . ..+.+|...|.+++|+|+|+
T Consensus 259 ~D-~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~ 337 (611)
T 1nr0_A 259 AD-KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK 337 (611)
T ss_dssp TT-SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred CC-CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC
Confidence 77 59999997643 1 12357889999999999999
Q ss_pred EEEEEcCCCceEeeeEEeCCCCee-eEe----------------------------------------------------
Q psy11524 136 LILSGGEDCKYKASFVWDTDGRQL-YSS---------------------------------------------------- 162 (323)
Q Consensus 136 ~l~~~~~d~~i~~i~v~d~~~~~~-~~~---------------------------------------------------- 162 (323)
+|++++.|++|+ +||+..... ..+
T Consensus 338 ~l~s~s~D~~v~---~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~ 414 (611)
T 1nr0_A 338 TLFSADAEGHIN---SWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQP 414 (611)
T ss_dssp EEEEEETTSCEE---EEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCE
T ss_pred EEEEEeCCCcEE---EEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCC
Confidence 999999999999 999853211 110
Q ss_pred ------------------------------ecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeee--ecCCCCccE
Q psy11524 163 ------------------------------LTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHS--LDKPDTGSV 209 (323)
Q Consensus 163 ------------------------------~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~--~~~~~~~~v 209 (323)
..+...+.+++|+|||++|++++.| +|++||+.+.... ....|...|
T Consensus 415 ~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v 494 (611)
T 1nr0_A 415 LGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEI 494 (611)
T ss_dssp EEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCE
T ss_pred cEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCce
Confidence 0022346789999999999999997 9999998765321 225689999
Q ss_pred EEEEEcCCCCEEEEEecCc-EEEEEcCC-CceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc--
Q psy11524 210 YDLVWSNDATQIAGACANV-IHIFDISS-SSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-- 285 (323)
Q Consensus 210 ~~~~~~~~~~~l~~~~~d~-i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-- 285 (323)
.+++|+|+|++|++++.|+ |++||+.+ ++.........|...|.+++|+|++ ..|++++.|+.+++|++...
T Consensus 495 ~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg----~~lasgs~D~~v~lW~~~~~~~ 570 (611)
T 1nr0_A 495 TSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDN----VRLATGSLDNSVIVWNMNKPSD 570 (611)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTCTTS
T ss_pred EEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCC----CEEEEEECCCcEEEEECCCccc
Confidence 9999999999999999999 99999987 5554431134499999999999999 89999999999999998753
Q ss_pred ----cCCCC-ccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 286 ----LDKPD-TGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 286 ----~~~~~-~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
....| ...|.+++|+|+++ |++++.|++|++|++
T Consensus 571 ~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 571 HPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp CCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred ccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 34567 78999999999998 999999999999997
No 18
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1e-39 Score=269.45 Aligned_cols=240 Identities=14% Similarity=0.160 Sum_probs=208.7
Q ss_pred eeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeE
Q psy11524 75 CRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFV 151 (323)
Q Consensus 75 ~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v 151 (323)
.+++ .|.+.|++++|+|++++|++++.+ +.|++|+.... ...+..|..+|.+++|+|++++|++++.|++|+ +
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~d-g~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~---v 81 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYS-GRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR---V 81 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETT-SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE---E
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCC-CcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEE---E
Confidence 3445 389999999999999999999877 69999998765 667888999999999999999999999999999 9
Q ss_pred EeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCC--eeeecCCCCccEEEEEEcC-CCCEEEEEec
Q psy11524 152 WDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGW--SHSLDKPDTGSVYDLVWSN-DATQIAGACA 226 (323)
Q Consensus 152 ~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~ 226 (323)
||++ ++.+..+.+|...|.+++|+|++++|++++.| +|++||++.. ....+.+|...|.+++|+| ++.+|++++.
T Consensus 82 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~ 161 (304)
T 2ynn_A 82 FNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCL 161 (304)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEET
T ss_pred EECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeC
Confidence 9995 77888899999999999999999999999997 9999998743 3456778999999999999 6789999999
Q ss_pred Cc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEee
Q psy11524 227 NV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSS 301 (323)
Q Consensus 227 d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~ 301 (323)
|+ |++||++++.....+ ...+...+..+.|+|... ...++.++.++.+++|++... ....|...|.+++|+|
T Consensus 162 D~~v~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~--~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p 238 (304)
T 2ynn_A 162 DRTVKVWSLGQSTPNFTL-TTGQERGVNYVDYYPLPD--KPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (304)
T ss_dssp TSEEEEEETTCSSCSEEE-ECCCTTCEEEEEECCSTT--CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred CCeEEEEECCCCCcccee-ccCCcCcEEEEEEEEcCC--CCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC
Confidence 99 999999887766552 345667899999987321 168888889999999988765 4567899999999999
Q ss_pred CCCeeEeeecCCeEEEEEee
Q psy11524 302 DATQIAGACANGSLLLGTII 321 (323)
Q Consensus 302 ~g~~l~s~~~dg~i~~~~l~ 321 (323)
++++|++|+.||+|++|++.
T Consensus 239 ~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 239 TLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp SSSEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEcCCCeEEEEECC
Confidence 99999999999999999974
No 19
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.3e-39 Score=264.95 Aligned_cols=276 Identities=19% Similarity=0.252 Sum_probs=225.7
Q ss_pred eeeeEeecccceeEeeEeccCCcceeeeeecc---cccc-ccceeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEe
Q psy11524 35 KNHLTIRRYDGTVINYPISPYISVLHSYAASH---SWPQ-ALSLCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPL 109 (323)
Q Consensus 35 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~ 109 (323)
....++.+|...|.++.|+|+++.++....++ .|+. +.+....+ .|...|.+++|+|++++|++++.+ +.|++|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-~~i~vw 92 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD-KTLKIW 92 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-SEEEEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC-CEEEEE
Confidence 44567889999999999999996554443333 2331 22223333 388999999999999999998777 599999
Q ss_pred CCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeC
Q psy11524 110 SPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSY 186 (323)
Q Consensus 110 ~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~ 186 (323)
+.... ...+..|...|.+++|+|++++|++++.|+.|+ +||++ ++.+..+..|..+|.+++|+|++++|++++.
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~---iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 169 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVR---IWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSY 169 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEE---EEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEE---EEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeC
Confidence 98765 667889999999999999999999999999999 99996 6777888889999999999999999999999
Q ss_pred C-eEEEEeCCCC-eee-ecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceE--EEEEc-c
Q psy11524 187 N-TLRLCDKVGW-SHS-LDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEIT--QLAVN-Q 259 (323)
Q Consensus 187 ~-~i~i~d~~~~-~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~--~~~~~-p 259 (323)
| .|++||++.. ... ....+...+..++|+|++++|++++.|+ |++||+++++.+.. +.+|..... ...++ +
T Consensus 170 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 170 DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKT--YTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEE--ECSSCCSSSCCCEEEECS
T ss_pred CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE--EEecCCceEEEEEEEEeC
Confidence 6 9999998754 333 3345667899999999999999999999 99999999998887 555544322 23444 4
Q ss_pred CCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeee--cCCeEEEEEe
Q psy11524 260 TGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGAC--ANGSLLLGTI 320 (323)
Q Consensus 260 ~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~--~dg~i~~~~l 320 (323)
++ ..+++++.++.+++|++... ....|...|.+++|+|+++.|++++ .|+.|++|+.
T Consensus 248 ~~----~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 248 GG----KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp SS----CEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred CC----cEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 55 67888888888999988765 4567899999999999999999987 6999999985
No 20
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2e-38 Score=265.46 Aligned_cols=280 Identities=15% Similarity=0.189 Sum_probs=220.7
Q ss_pred eeeeeeEeecccceeEeeEeccCCcceeeeeeccccccccceeee-------------c-CCCCCEEEEEEcCCCCeEEE
Q psy11524 33 FVKNHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCRT-------------L-NVSPPVYSAAWSPDSNKVLL 98 (323)
Q Consensus 33 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-~~~~~v~~~~~sp~~~~l~~ 98 (323)
.+....+++||.+.|.+++|+|++. .++++++.|+++++|.. + .|...|.+++|+|+|++|++
T Consensus 27 ~~~l~~tL~GH~~~V~~v~~sp~~~---~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s 103 (340)
T 4aow_A 27 QMTLRGTLKGHNGWVTQIATTPQFP---DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALS 103 (340)
T ss_dssp EEEEEEEECCCSSCEEEEEECTTCT---TEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred ceEEEEEECCccCCEEEEEEeCCCC---CEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEE
Confidence 3344567899999999999999842 45666666666666542 2 37899999999999999999
Q ss_pred EeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCee--eEeecCCCceeEEEE
Q psy11524 99 TQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQL--YSSLTHDHPISSLAW 174 (323)
Q Consensus 99 ~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~--~~~~~~~~~v~~~~~ 174 (323)
++.+ +.+++|+.... ......+...+..+.+++++++|++++.|+.++ +||+..... .....|...+..++|
T Consensus 104 ~~~d-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~---~~d~~~~~~~~~~~~~~~~~v~~~~~ 179 (340)
T 4aow_A 104 GSWD-GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIK---LWNTLGVCKYTVQDESHSEWVSCVRF 179 (340)
T ss_dssp EETT-SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE---EECTTSCEEEEECSSSCSSCEEEEEE
T ss_pred Eccc-ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEE---EEEeCCCceEEEEeccccCcccceEE
Confidence 9877 59999998776 445667788899999999999999999999999 999965443 344568889999999
Q ss_pred ecCC--CEEEEEeCC-eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCc
Q psy11524 175 APGG--DMFAVGSYN-TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHS 249 (323)
Q Consensus 175 ~p~~--~~l~~~~~~-~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~ 249 (323)
++++ .++++++.| .|++||++.. ....+.+|...|.+++|+|++++|++++.|+ |++||+++++.+.. +. +.
T Consensus 180 ~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~--~~-~~ 256 (340)
T 4aow_A 180 SPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYT--LD-GG 256 (340)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE--EE-CS
T ss_pred ccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeee--ec-CC
Confidence 9864 467788886 9999998855 5557778999999999999999999999999 99999999998887 33 44
Q ss_pred cceEEEEEccCCC----CccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 250 HEITQLAVNQTGS----LQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 250 ~~v~~~~~~p~g~----~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
..+..+.|+|++. +.|+.|.+|+.++...+..+... ....|...|++++|+|+|++|++|+.||.|++|++.
T Consensus 257 ~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 257 DIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp SCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred ceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 6899999999863 33334444444443333333221 234578899999999999999999999999999986
Q ss_pred c
Q psy11524 322 Q 322 (323)
Q Consensus 322 ~ 322 (323)
.
T Consensus 337 t 337 (340)
T 4aow_A 337 I 337 (340)
T ss_dssp C
T ss_pred C
Confidence 3
No 21
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.2e-39 Score=276.51 Aligned_cols=237 Identities=16% Similarity=0.182 Sum_probs=212.5
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD- 155 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~- 155 (323)
.|..+|++++|+|++++|++++.+ +.|++||.... ...+.+|...|.+++|+|++++|++|+.|++|+ +||+.
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~D-g~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~---iwd~~~ 181 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASED-ATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK---LWDFQG 181 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESS-SCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCC---EEETTS
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCC-CeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEE---EEeCCC
Confidence 599999999999999999999877 59999998765 678899999999999999999999999999999 99996
Q ss_pred CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCC-CCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEE
Q psy11524 156 GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKV-GWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIF 232 (323)
Q Consensus 156 ~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iw 232 (323)
.+.+..+.+|...|.+++|+|++++|++++.| .|++||++ +.....+.+|...+.++.++|+|++|++++.|+ |++|
T Consensus 182 ~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vw 261 (410)
T 1vyh_C 182 FECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261 (410)
T ss_dssp SCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 56778888999999999999999999999997 99999987 456667788999999999999999999999999 9999
Q ss_pred EcCCCceeeeecCCCCccceEEEEEccCCC----------------CccceEEEEeCCCCeEEEecccc----cCCCCcc
Q psy11524 233 DISSSSSSNVTAPLSHSHEITQLAVNQTGS----------------LQERHVAFIDKNRDLYLSMWSHS----LDKPDTG 292 (323)
Q Consensus 233 d~~~~~~~~~~~~~~~~~~v~~~~~~p~g~----------------~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~ 292 (323)
|+++++.... +..|...|.+++|+|++. .....+++++.++.+++|++... ....|..
T Consensus 262 d~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~ 339 (410)
T 1vyh_C 262 VVATKECKAE--LREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN 339 (410)
T ss_dssp ETTTCCEEEE--ECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred ECCCCceeeE--ecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCC
Confidence 9999998887 788999999999999742 01257888899999999998765 4456889
Q ss_pred ceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 293 SVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 293 ~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
.|.+++|+|+|++|++|+.||.|++|++.
T Consensus 340 ~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 340 WVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp CEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 99999999999999999999999999874
No 22
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=266.93 Aligned_cols=239 Identities=15% Similarity=0.218 Sum_probs=208.9
Q ss_pred eeeec-CCCCCEEEEEEcCC----CCeEEEEeeCCeEEEEeCCCCc----eeEeeccCCCeEEEEECCCCCEEEEEcCCC
Q psy11524 74 LCRTL-NVSPPVYSAAWSPD----SNKVLLTQAKSLVIKPLSPNNK----ATKWQAHDGLILKVAWCSSTDLILSGGEDC 144 (323)
Q Consensus 74 ~~~~~-~~~~~v~~~~~sp~----~~~l~~~~~~~~~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 144 (323)
+.+.+ .|.+.|.+++|+|+ +++|++|+.| +.|++|+.... ...+.+|...|.+++|+|++.++++++.|+
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D-~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~ 102 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLD-DLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDA 102 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETT-SCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTS
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCC-CCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCC
Confidence 33444 59999999999985 5689888777 59999997654 335789999999999999999999999999
Q ss_pred ceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCC-CeeeecCCCCccEEEEEEcCCCCEE
Q psy11524 145 KYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVG-WSHSLDKPDTGSVYDLVWSNDATQI 221 (323)
Q Consensus 145 ~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~-~~~~~~~~~~~~v~~~~~~~~~~~l 221 (323)
+|+ +||+. ++.+..+..+...+.+++|+|++++|++++.+ .+++||++. .....+..+...+.+++|+|+|++|
T Consensus 103 ~i~---lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l 179 (321)
T 3ow8_A 103 HIR---LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYL 179 (321)
T ss_dssp EEE---EEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEE
T ss_pred cEE---EEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEE
Confidence 999 99995 66777888888899999999999999999996 999999874 4555666788899999999999999
Q ss_pred EEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeE
Q psy11524 222 AGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYD 296 (323)
Q Consensus 222 ~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~ 296 (323)
++++.|+ |++||+++++.+.+ +.+|..+|.+++|+|++ ..|++++.++.+++|++... ....|...|.+
T Consensus 180 asg~~dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~----~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 253 (321)
T 3ow8_A 180 ASGAIDGIINIFDIATGKLLHT--LEGHAMPIRSLTFSPDS----QLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLN 253 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEE--ECCCSSCCCEEEECTTS----CEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEcCCCeEEEEECCCCcEEEE--EcccCCceeEEEEcCCC----CEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEE
Confidence 9999999 99999999999888 78899999999999998 88999999999999998764 45678899999
Q ss_pred EEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 297 LVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 297 ~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
++|+|++++|++++.|++|++|++.+
T Consensus 254 ~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 254 VAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 99999999999999999999999753
No 23
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.9e-38 Score=287.93 Aligned_cols=272 Identities=17% Similarity=0.158 Sum_probs=220.3
Q ss_pred eeeeEeecccceeEeeEeccCCcceeeeeeccccccccceee-------------ec-CCCCCEEEEEEcCCCCeEEEEe
Q psy11524 35 KNHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCR-------------TL-NVSPPVYSAAWSPDSNKVLLTQ 100 (323)
Q Consensus 35 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~-~~~~~v~~~~~sp~~~~l~~~~ 100 (323)
.....+++|.+.|.+++++|++. .++++++.|+++++|. .+ .|...|.+++|+|++++|++++
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~---~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNA---DIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCC---SEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred chhhhcccCCceeEEEEecCCCC---CEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEe
Confidence 44457899999999999999753 4566666666666553 22 4899999999999999999998
Q ss_pred eCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEe----ecCCCceeEEEE
Q psy11524 101 AKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSS----LTHDHPISSLAW 174 (323)
Q Consensus 101 ~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~----~~~~~~v~~~~~ 174 (323)
.+ +.|++||.... ...+.+|...|.+++|+|++++|++++.|++|+ +||..+.....+ .+|...|.+++|
T Consensus 450 ~D-g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~---iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 525 (694)
T 3dm0_A 450 WD-GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK---LWNTLGECKYTISEGGEGHRDWVSCVRF 525 (694)
T ss_dssp TT-SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEE---EECTTSCEEEEECSSTTSCSSCEEEEEE
T ss_pred CC-CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEE---EEECCCCcceeeccCCCCCCCcEEEEEE
Confidence 77 59999998765 667889999999999999999999999999999 999976655544 357788999999
Q ss_pred ecCC--CEEEEEeCC-eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCc
Q psy11524 175 APGG--DMFAVGSYN-TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHS 249 (323)
Q Consensus 175 ~p~~--~~l~~~~~~-~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~ 249 (323)
+|++ ..+++++.| .|++||+++. ....+.+|.+.|.+++|+|+|++|++++.|+ |++||+++++.+.. + .+.
T Consensus 526 ~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~--~-~~~ 602 (694)
T 3dm0_A 526 SPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYS--L-EAN 602 (694)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEEC--C-BCS
T ss_pred eCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEE--e-cCC
Confidence 9986 579999986 9999998854 5567788999999999999999999999999 99999999998876 3 345
Q ss_pred cceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCC-------------------CCccceeEEEEeeCCCee
Q psy11524 250 HEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDK-------------------PDTGSVYDLVWSSDATQI 306 (323)
Q Consensus 250 ~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~-------------------~~~~~v~~~~~s~~g~~l 306 (323)
..+.+++|+|++ ..+... .++.+++|++... ... .+...+.+++|||+|++|
T Consensus 603 ~~v~~~~~sp~~----~~l~~~-~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l 677 (694)
T 3dm0_A 603 SVIHALCFSPNR----YWLCAA-TEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTL 677 (694)
T ss_dssp SCEEEEEECSSS----SEEEEE-ETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEE
T ss_pred CcEEEEEEcCCC----cEEEEE-cCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEE
Confidence 689999999997 444333 3444666666543 000 011247899999999999
Q ss_pred EeeecCCeEEEEEee
Q psy11524 307 AGACANGSLLLGTII 321 (323)
Q Consensus 307 ~s~~~dg~i~~~~l~ 321 (323)
++|+.||.|++|++.
T Consensus 678 ~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 678 FSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEETTSEEEEEEC-
T ss_pred EEEcCCCeEEEEecc
Confidence 999999999999985
No 24
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.4e-37 Score=259.80 Aligned_cols=271 Identities=13% Similarity=0.113 Sum_probs=227.0
Q ss_pred EeecccceeEeeEeccCCcceeeeeecc---ccccc-cc---eee---ecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEE
Q psy11524 39 TIRRYDGTVINYPISPYISVLHSYAASH---SWPQA-LS---LCR---TLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKP 108 (323)
Q Consensus 39 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~-~~---~~~---~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~ 108 (323)
...+|...|.++.|+|++..++... ++ .|+.. .+ ... ...|...|.+++|+|++++|++++.+ +.|++
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~~ 123 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA-STLSI 123 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS-SEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC-CcEEE
Confidence 3458999999999999997665443 33 24321 11 111 12588999999999999999998776 59999
Q ss_pred eCCCCc----eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEE
Q psy11524 109 LSPNNK----ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAV 183 (323)
Q Consensus 109 ~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 183 (323)
|+.... ...+..|...|.+++|+|+++++++++.|+.|+ +||++ ++....+..|...+.+++|+|+++++++
T Consensus 124 ~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~---~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 200 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIA---VWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWT 200 (337)
T ss_dssp EECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE---EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEE---EEeCCCCceeeeeecccCceEEEEECCCCCEEEE
Confidence 998764 345678999999999999999999999999999 99996 5666778889999999999999999999
Q ss_pred EeCC-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCC
Q psy11524 184 GSYN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTG 261 (323)
Q Consensus 184 ~~~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g 261 (323)
++.+ .|++||++.........+...+.+++|+|++++|++++.++ |++||+++++... +..|...+.+++|+|++
T Consensus 201 ~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~ 277 (337)
T 1gxr_A 201 GGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ---LHLHESCVLSLKFAYCG 277 (337)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE---ECCCSSCEEEEEECTTS
T ss_pred EecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE---EcCCccceeEEEECCCC
Confidence 9986 99999998665544445788899999999999999999999 9999999887654 57889999999999998
Q ss_pred CCccceEEEEeCCCCeEEEecccc---cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 262 SLQERHVAFIDKNRDLYLSMWSHS---LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 262 ~~~d~~l~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
..+++.+.++.+.+|++... ....|...+.+++|+|++++|++++.||.|++|++.
T Consensus 278 ----~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 278 ----KWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ----SEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred ----CEEEEecCCCcEEEEECCCCeEEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 78888888999999998765 222357899999999999999999999999999985
No 25
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.8e-37 Score=260.02 Aligned_cols=236 Identities=14% Similarity=0.149 Sum_probs=206.0
Q ss_pred eeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeE
Q psy11524 75 CRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFV 151 (323)
Q Consensus 75 ~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v 151 (323)
.+.+ .|...|++++|+|++++|++++.+ +.|++|+.... ...+..|...|.+++|+|++++|++++.|+.++ +
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~D-g~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~---i 123 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQD-GKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICS---I 123 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETT-TEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEE---E
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCC-CcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEE---E
Confidence 3444 499999999999999999999877 59999997655 667788999999999999999999999999999 9
Q ss_pred EeCCC-----CeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCCEEEEE
Q psy11524 152 WDTDG-----RQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDATQIAGA 224 (323)
Q Consensus 152 ~d~~~-----~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~ 224 (323)
|++.. .....+.+|...+.++.|+|++. +++++.| .|++||++.. ....+.+|...|.+++|+|++++++++
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEE
Confidence 99953 24456788999999999999875 7777776 9999998754 556778899999999999999999999
Q ss_pred ecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----c--CCCCccceeEE
Q psy11524 225 CANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----L--DKPDTGSVYDL 297 (323)
Q Consensus 225 ~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~--~~~~~~~v~~~ 297 (323)
+.|+ |++||+++++.+.. +.+|...|.+++|+|++ ..+++++.++.+++|++... . ...+...|.++
T Consensus 203 ~~d~~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~----~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~ 276 (340)
T 1got_B 203 ACDASAKLWDVREGMCRQT--FTGHESDINAICFFPNG----NAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276 (340)
T ss_dssp ETTSCEEEEETTTCSEEEE--ECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred eCCCcEEEEECCCCeeEEE--EcCCcCCEEEEEEcCCC----CEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEE
Confidence 9999 99999999998888 78899999999999998 89999999999999998764 1 12234579999
Q ss_pred EEeeCCCeeEeeecCCeEEEEEee
Q psy11524 298 VWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 298 ~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
+|+|+|++|++|+.||.|++|++.
T Consensus 277 ~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 277 SFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp EECTTSSEEEEEETTSEEEEEETT
T ss_pred EECCCCCEEEEECCCCeEEEEEcc
Confidence 999999999999999999999964
No 26
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=8.8e-38 Score=256.95 Aligned_cols=236 Identities=16% Similarity=0.231 Sum_probs=200.9
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc----eeEeeccCCCeEEEEECCC--CCEEEEEcCCCceEeeeEE
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK----ATKWQAHDGLILKVAWCSS--TDLILSGGEDCKYKASFVW 152 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~i~v~ 152 (323)
.|...|++++|+|+|++||+++.| +.|++|+.... ...+.+|.+.|.+++|+|+ +++|++++.|++|+ +|
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D-~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~---iW 82 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSD-KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM---IW 82 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETT-SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE---EE
T ss_pred CCcCceEEEEECCCCCEEEEEeCC-CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE---EE
Confidence 589999999999999999999877 59999997532 5678999999999999864 89999999999999 99
Q ss_pred eCCCC---eeeEeecCCCceeEEEEecC--CCEEEEEeCC-eEEEEeCCCC---eeeecCCCCccEEEEEEcCC------
Q psy11524 153 DTDGR---QLYSSLTHDHPISSLAWAPG--GDMFAVGSYN-TLRLCDKVGW---SHSLDKPDTGSVYDLVWSND------ 217 (323)
Q Consensus 153 d~~~~---~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~~-~i~i~d~~~~---~~~~~~~~~~~v~~~~~~~~------ 217 (323)
|++.. .+..+..|...|.+++|+|+ +.+|++++.| .|++||++.. ....+.+|...|.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 99643 45667789999999999997 8899999997 9999998743 23456679999999999997
Q ss_pred -------CCEEEEEecCc-EEEEEcCCCc----eeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc
Q psy11524 218 -------ATQIAGACANV-IHIFDISSSS----SSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS 285 (323)
Q Consensus 218 -------~~~l~~~~~d~-i~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~ 285 (323)
+++|++++.|+ |++||+++++ .... +.+|...|.+++|+|++. ....++.++.|+.+++|++...
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~--l~~H~~~V~~v~~sp~~~-~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST--LEGHSDWVRDVAWSPTVL-LRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEE--ECCCSSCEEEEEECCCCS-SSEEEEEEETTSCEEEEEESST
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEE--ecCCCCceEEEEECCCCC-CceEEEEEECCCcEEEEEeCCC
Confidence 57999999999 9999998776 4444 688999999999999830 0168889999999999987652
Q ss_pred -------cC--CCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 286 -------LD--KPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 286 -------~~--~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
.. ..|...|.+++|+|+|++|++++.||.|++|+..
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 240 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 12 4567899999999999999999999999999874
No 27
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=260.36 Aligned_cols=241 Identities=17% Similarity=0.297 Sum_probs=205.0
Q ss_pred ceeeecC-CCC-CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCce----e-EeeccCCCeEEEEECCCCCEEEEEcCCCc
Q psy11524 73 SLCRTLN-VSP-PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKA----T-KWQAHDGLILKVAWCSSTDLILSGGEDCK 145 (323)
Q Consensus 73 ~~~~~~~-~~~-~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~----~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 145 (323)
.+.+.+. |.. .|.+++|+|+|++||+++.+ +.|++|+..... . ...+|...|.+++|+|++++|++++.|++
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D-~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGD-RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETT-SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCC-CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 3445553 766 99999999999999999877 599999987651 1 23579999999999999999999999999
Q ss_pred eEeeeEEeCCC---CeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCC----eeeecCCCCccEEEEEEcCC
Q psy11524 146 YKASFVWDTDG---RQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGW----SHSLDKPDTGSVYDLVWSND 217 (323)
Q Consensus 146 i~~i~v~d~~~---~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~----~~~~~~~~~~~v~~~~~~~~ 217 (323)
++ +|+++. +.+..+.+|...|.+++|+|++++|++++.| .|++||++.. ....+..|...|.+++|+|+
T Consensus 85 v~---iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 85 TC---IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp EE---EEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred EE---EEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 99 999864 3466788899999999999999999999997 9999998743 24466789999999999999
Q ss_pred CCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-----------
Q psy11524 218 ATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----------- 285 (323)
Q Consensus 218 ~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----------- 285 (323)
+++|++++.|+ |++||.++++......+.+|...|.+++|+|++ ..|++++.++.+++|+....
T Consensus 162 ~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g----~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~ 237 (345)
T 3fm0_A 162 QELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSG----QRLASCSDDRTVRIWRQYLPGNEQGVACSGS 237 (345)
T ss_dssp SSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEEEECTTCTTCCCCC--
T ss_pred CCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCC----CEEEEEeCCCeEEEeccccCCCCccceeecc
Confidence 99999999999 999999887644322278999999999999999 89999999999999986321
Q ss_pred ---------cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 286 ---------LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 286 ---------~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
....|...|.+++|+|++..|++++.|+.|++|++.
T Consensus 238 ~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~ 282 (345)
T 3fm0_A 238 DPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQED 282 (345)
T ss_dssp -CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEEC
T ss_pred CCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeC
Confidence 112377889999999999999999999999999874
No 28
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-37 Score=259.44 Aligned_cols=276 Identities=12% Similarity=0.135 Sum_probs=228.1
Q ss_pred eeeeEeecccceeEeeEeccCCcceeeeeecc---ccc-cccceeeecC-CCCCEEEEEEcCCCCeEEEEeeCCeEEEEe
Q psy11524 35 KNHLTIRRYDGTVINYPISPYISVLHSYAASH---SWP-QALSLCRTLN-VSPPVYSAAWSPDSNKVLLTQAKSLVIKPL 109 (323)
Q Consensus 35 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~ 109 (323)
.....+.+|.+.|.++.|+|+++.++....++ .|+ .+.+....+. |...|.+++|+|++++|++++.+ +.|++|
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g~i~iw 101 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSAD-YSIKLW 101 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-TEEEEE
T ss_pred cccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCC-CeEEEE
Confidence 44467899999999999999997666554444 354 3444445554 89999999999999999998777 599999
Q ss_pred CCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCC-----CceEeeeEEeCCC------------CeeeEeecCCC--c
Q psy11524 110 SPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGED-----CKYKASFVWDTDG------------RQLYSSLTHDH--P 168 (323)
Q Consensus 110 ~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~i~v~d~~~------------~~~~~~~~~~~--~ 168 (323)
+.... ...+. +...+.+++|+|+++++++++.+ +.|. +||+.. .....+..+.. .
T Consensus 102 d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (369)
T 3zwl_B 102 DVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSIN---IYEIERDSATHELTKVSEEPIHKIITHEGLDA 177 (369)
T ss_dssp ETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEE---EEEEEECTTTCCEEEECSSCSEEEECCTTCCC
T ss_pred ECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEE---EEEecCCccceeecccccceeeeccCCcCccc
Confidence 98765 33444 88999999999999999999998 9999 999842 13344455555 8
Q ss_pred eeEEEEecCCCEEEEEeCC-eEEEEeCCC--CeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeec
Q psy11524 169 ISSLAWAPGGDMFAVGSYN-TLRLCDKVG--WSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTA 244 (323)
Q Consensus 169 v~~~~~~p~~~~l~~~~~~-~i~i~d~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~ 244 (323)
+.+++|+|++++|++++.+ .|++||++. .....+..|...|.+++|+|++++|++++.|+ |++||+++++.+..+
T Consensus 178 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~- 256 (369)
T 3zwl_B 178 ATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY- 256 (369)
T ss_dssp EEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-
T ss_pred eeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee-
Confidence 9999999999999999996 999999885 35556777899999999999999999999999 999999999988873
Q ss_pred CCCCccceEEEEEccCCCCccceEEEEeCCC--------------CeEEEecccc----cCCCCccceeEEEEeeCCCee
Q psy11524 245 PLSHSHEITQLAVNQTGSLQERHVAFIDKNR--------------DLYLSMWSHS----LDKPDTGSVYDLVWSSDATQI 306 (323)
Q Consensus 245 ~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~--------------~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l 306 (323)
. +...+..++|+|++ ..+++...++ .+.+|+.... ....|...|.+++|+|++++|
T Consensus 257 -~-~~~~~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 330 (369)
T 3zwl_B 257 -E-TDCPLNTAVITPLK----EFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSY 330 (369)
T ss_dssp -E-CSSCEEEEEECSSS----SEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred -c-CCCCceeEEecCCC----ceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEE
Confidence 3 67889999999998 7777777766 5777777654 345578999999999999999
Q ss_pred EeeecCCeEEEEEeec
Q psy11524 307 AGACANGSLLLGTIIQ 322 (323)
Q Consensus 307 ~s~~~dg~i~~~~l~~ 322 (323)
++++.||.|++|++..
T Consensus 331 ~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 331 ASGGEDGFIRLHHFEK 346 (369)
T ss_dssp EEEETTSEEEEEEECH
T ss_pred EEEcCCCeEEEEECcc
Confidence 9999999999999853
No 29
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.6e-37 Score=263.10 Aligned_cols=271 Identities=13% Similarity=0.127 Sum_probs=223.9
Q ss_pred eecccceeEeeEeccCCcceeeeeecc---ccccccc---eeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCC
Q psy11524 40 IRRYDGTVINYPISPYISVLHSYAASH---SWPQALS---LCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPN 112 (323)
Q Consensus 40 ~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~ 112 (323)
+..|.++|.++.|+|++..++....++ .|+.... ....+ .|...|.+++|+|++++|++++.+ +.|++|+..
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-g~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-RNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-SCEEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-CeEEEEECC
Confidence 456899999999999997665543433 3553222 44444 489999999999999999998776 599999986
Q ss_pred Cc----eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCe----eeEe-ecCCCceeEEEEecCCCEEEE
Q psy11524 113 NK----ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQ----LYSS-LTHDHPISSLAWAPGGDMFAV 183 (323)
Q Consensus 113 ~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~----~~~~-~~~~~~v~~~~~~p~~~~l~~ 183 (323)
.. ...+..|...|.+++|+|++++|++++.|+.|+ +||++... ...+ ..|...|.+++|+|++++|++
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~---i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVIS---ICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 159 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEE---EEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEE
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEE---EEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEE
Confidence 65 233467899999999999999999999999999 99996332 2333 567889999999999999999
Q ss_pred EeCC-eEEEEeCC-------------------CCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeee
Q psy11524 184 GSYN-TLRLCDKV-------------------GWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNV 242 (323)
Q Consensus 184 ~~~~-~i~i~d~~-------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~ 242 (323)
++.+ .|++||++ +.....+..|...+.+++|+|++++|++++.|+ |++||+++++.+..
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVAT 239 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEE
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEE
Confidence 9986 99999963 345556668899999999999999999999999 99999999998888
Q ss_pred ecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEeccc--------------------------------------
Q psy11524 243 TAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSH-------------------------------------- 284 (323)
Q Consensus 243 ~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~-------------------------------------- 284 (323)
+..|..++.+++|+|++ ..++.+ .++.+.+|++..
T Consensus 240 --~~~~~~~v~~~~~~~~~----~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (372)
T 1k8k_C 240 --LASETLPLLAVTFITES----SLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSE 312 (372)
T ss_dssp --EECSSCCEEEEEEEETT----EEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---
T ss_pred --EccCCCCeEEEEEecCC----CEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccc
Confidence 67888899999999998 667666 889999999876
Q ss_pred ------c-cCCCCccceeEEEEe-eCC---CeeEeeecCCeEEEEEee
Q psy11524 285 ------S-LDKPDTGSVYDLVWS-SDA---TQIAGACANGSLLLGTII 321 (323)
Q Consensus 285 ------~-~~~~~~~~v~~~~~s-~~g---~~l~s~~~dg~i~~~~l~ 321 (323)
. +...|...|.+++|+ ++| ++|++++.||.|++|++.
T Consensus 313 ~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 313 GSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp ------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred cCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 2 224789999999977 566 899999999999999974
No 30
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.2e-37 Score=255.88 Aligned_cols=268 Identities=13% Similarity=0.074 Sum_probs=226.6
Q ss_pred ccceeEeeEeccCCcceeeeeecc---cc--ccccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc---
Q psy11524 43 YDGTVINYPISPYISVLHSYAASH---SW--PQALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--- 114 (323)
Q Consensus 43 ~~~~v~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--- 114 (323)
+.+.|.+++|+|||+.++.....+ .| ....+....+.|...|++++|+|++++|++++ + +.|++|+....
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-d-g~i~iw~~~~~~~~ 85 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-K-GCVKVWDISHPGNK 85 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-B-SEEEEEETTSTTCC
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-C-CeEEEEECCCCCce
Confidence 567899999999997765443332 12 23344556668999999999999999999887 5 69999998653
Q ss_pred --eeEee--ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCC---eeeEeecCCCceeEEEEecCCCEEEEEeCC
Q psy11524 115 --ATKWQ--AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGR---QLYSSLTHDHPISSLAWAPGGDMFAVGSYN 187 (323)
Q Consensus 115 --~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~---~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~ 187 (323)
...+. .|...|.+++|+|++++|++++.|+.|+ +||++.. ....+..+...+.+++|+|+++++++++.+
T Consensus 86 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~---~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 162 (337)
T 1gxr_A 86 SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS---IWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD 162 (337)
T ss_dssp SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEE---EEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEE---EEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC
Confidence 23333 7899999999999999999999999999 9999643 456677888999999999999999999996
Q ss_pred -eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCc
Q psy11524 188 -TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQ 264 (323)
Q Consensus 188 -~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~ 264 (323)
.|++||+++. ....+..|...+.+++|+|++++|++++.|+ |++||+++++.+.. ..+...+.+++|+|++
T Consensus 163 g~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~---~~~~~~v~~~~~s~~~--- 236 (337)
T 1gxr_A 163 GNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ---HDFTSQIFSLGYCPTG--- 236 (337)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE---EECSSCEEEEEECTTS---
T ss_pred CcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEee---ecCCCceEEEEECCCC---
Confidence 9999998754 4556777999999999999999999999999 99999999988876 3467789999999998
Q ss_pred cceEEEEeCCCCeEEEecccc---cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 265 ERHVAFIDKNRDLYLSMWSHS---LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 265 d~~l~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
..++++..++.+.+|++... ....|...|.+++|+|++++|++++.||.|++|++..
T Consensus 237 -~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 237 -EWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp -SEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred -CEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 89999999999999998765 3456789999999999999999999999999999743
No 31
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.1e-37 Score=263.74 Aligned_cols=278 Identities=13% Similarity=0.155 Sum_probs=212.2
Q ss_pred eeeeeEeecccceeEeeEeccCC-cceeeeeecc---ccccc-cceeeec---CCCCCEEEEEEcC-CCCeEEEEeeCCe
Q psy11524 34 VKNHLTIRRYDGTVINYPISPYI-SVLHSYAASH---SWPQA-LSLCRTL---NVSPPVYSAAWSP-DSNKVLLTQAKSL 104 (323)
Q Consensus 34 ~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~~~---~~~~~-~~~~~~~---~~~~~v~~~~~sp-~~~~l~~~~~~~~ 104 (323)
......+.+|.+.|.++.|+|++ ..++....++ .|+.. .+....+ .|...|.+++|+| ++++|++++.+ +
T Consensus 63 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-~ 141 (383)
T 3ei3_B 63 YKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-G 141 (383)
T ss_dssp CEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-T
T ss_pred cceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-C
Confidence 34456788999999999999998 6555554443 25422 2222222 4899999999999 67888888776 6
Q ss_pred EEEEeCCCCc-eeEeec---cCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCC-
Q psy11524 105 VIKPLSPNNK-ATKWQA---HDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGD- 179 (323)
Q Consensus 105 ~v~~~~~~~~-~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~- 179 (323)
.|++|+..+. ...+.. |...|.+++|+|++++|++++.|+.|+ +||++++.+..+..|...|.+++|+|+++
T Consensus 142 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~---i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 142 ATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLL---LLGLDGHEIFKEKLHKAKVTHAEFNPRCDW 218 (383)
T ss_dssp EEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEE---EEETTSCEEEEEECSSSCEEEEEECSSCTT
T ss_pred EEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEE---EEECCCCEEEEeccCCCcEEEEEECCCCCC
Confidence 9999998876 444443 447899999999999999999999999 99999999999999999999999999998
Q ss_pred EEEEEeCC-eEEEEeCCC----CeeeecCCCCccEEEEEEcC-CCCEEEEEecCc-EEEEEcCCCceeeeecC-----CC
Q psy11524 180 MFAVGSYN-TLRLCDKVG----WSHSLDKPDTGSVYDLVWSN-DATQIAGACANV-IHIFDISSSSSSNVTAP-----LS 247 (323)
Q Consensus 180 ~l~~~~~~-~i~i~d~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~-----~~ 247 (323)
++++++.| .|++||++. .......+|...+.+++|+| ++++|++++.|+ |++||+++++....+.. ..
T Consensus 219 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (383)
T 3ei3_B 219 LMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ 298 (383)
T ss_dssp EEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT
T ss_pred EEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc
Confidence 89999986 999999874 33333336899999999999 999999999999 99999998876555211 11
Q ss_pred Cccc----------eEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCC--CCccceeEEEEeeCCCeeEeeec
Q psy11524 248 HSHE----------ITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDK--PDTGSVYDLVWSSDATQIAGACA 311 (323)
Q Consensus 248 ~~~~----------v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~--~~~~~v~~~~~s~~g~~l~s~~~ 311 (323)
+... +..++|+|+++ . +++.++.+.+|++... ... .|...+..++|+|+|++|++++
T Consensus 299 ~~~~~~~~~~p~~~~~~~~~s~dg~----~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s- 371 (383)
T 3ei3_B 299 HLTPIKATWHPMYDLIVAGRYPDDQ----L--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM- 371 (383)
T ss_dssp TSCCCCCEECSSSSEEEEECBCCTT----T--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-
T ss_pred cccceEEeccCCCCceEEEecCCcc----c--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-
Confidence 2223 33355555542 2 3345666666666543 122 2467788889999999999997
Q ss_pred CCeEEEEEeec
Q psy11524 312 NGSLLLGTIIQ 322 (323)
Q Consensus 312 dg~i~~~~l~~ 322 (323)
||.|++|++.+
T Consensus 372 d~~i~iw~~~~ 382 (383)
T 3ei3_B 372 GFNILIWNRED 382 (383)
T ss_dssp TTEEEEEECC-
T ss_pred CCcEEEEecCC
Confidence 99999999864
No 32
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=261.88 Aligned_cols=274 Identities=13% Similarity=0.173 Sum_probs=221.8
Q ss_pred eEeecccceeEeeEeccCCcceeeeeecccc---cccccee----------eecCCCCCEEEEEEcCC---CCeEEEEee
Q psy11524 38 LTIRRYDGTVINYPISPYISVLHSYAASHSW---PQALSLC----------RTLNVSPPVYSAAWSPD---SNKVLLTQA 101 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~----------~~~~~~~~v~~~~~sp~---~~~l~~~~~ 101 (323)
..+.+|.+.|.++.|+|++..+ ++.+++ |+..++| ..+.|...|.+++|+|+ +++|++++.
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l---~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~ 88 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKF---VTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDF 88 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEE---EEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEET
T ss_pred hhccCCCCceEEEEEcCCCceE---EEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecC
Confidence 3457899999999999998543 333333 3333333 23358899999999999 689998877
Q ss_pred CCeEEEEeCCCCc---eeEeeccCCCeEEEEE------CCCCCEEEEEcCCCceEeeeEEeCCC-C-eeeEeecCCC---
Q psy11524 102 KSLVIKPLSPNNK---ATKWQAHDGLILKVAW------CSSTDLILSGGEDCKYKASFVWDTDG-R-QLYSSLTHDH--- 167 (323)
Q Consensus 102 ~~~~v~~~~~~~~---~~~~~~~~~~v~~~~~------~~~~~~l~~~~~d~~i~~i~v~d~~~-~-~~~~~~~~~~--- 167 (323)
+ +.|++|+.... ...+..|...|.++.| +|++++|++++.|+.|+ +||++. + ....+..+..
T Consensus 89 d-g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~---vwd~~~~~~~~~~~~~~~~~~~ 164 (357)
T 3i2n_A 89 G-GNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVK---VWDPRQKDDPVANMEPVQGENK 164 (357)
T ss_dssp T-SCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEE---EECTTSCSSCSEEECCCTTSCC
T ss_pred C-CeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEE---EEeCCCCCCcceeccccCCCCC
Confidence 6 69999998754 5678899999999954 78899999999999999 999963 3 5666655444
Q ss_pred -ceeEEE----EecCCCEEEEEeCC-eEEEEeCCCCeeeecCCCCccEEEEEEcC---CCCEEEEEecCc-EEEEEcCCC
Q psy11524 168 -PISSLA----WAPGGDMFAVGSYN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSN---DATQIAGACANV-IHIFDISSS 237 (323)
Q Consensus 168 -~v~~~~----~~p~~~~l~~~~~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~d~-i~iwd~~~~ 237 (323)
.+.+++ |+|+++++++++.+ .|++||+++........|...+.+++|+| ++++|++++.|+ |++||++++
T Consensus 165 ~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 165 RDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp CCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred CceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 788888 67899999999996 99999998776666667889999999999 999999999999 999999887
Q ss_pred ceeeeec---CCCCccceEEEEEccCCCCccc-eEEEEeCCCCeEEEecccc-----------------------cCCCC
Q psy11524 238 SSSNVTA---PLSHSHEITQLAVNQTGSLQER-HVAFIDKNRDLYLSMWSHS-----------------------LDKPD 290 (323)
Q Consensus 238 ~~~~~~~---~~~~~~~v~~~~~~p~g~~~d~-~l~~~~~~~~~~~~~~~~~-----------------------~~~~~ 290 (323)
+....+. +..|...|.+++|+|++ . .+++++.++.+.+|++... ....|
T Consensus 245 ~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 320 (357)
T 3i2n_A 245 HPTKGFASVSEKAHKSTVWQVRHLPQN----RELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS 320 (357)
T ss_dssp ETTTEEEEEEEECCSSCEEEEEEETTE----EEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC
T ss_pred CcccceeeeccCCCcCCEEEEEECCCC----CcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccC
Confidence 7655421 23789999999999998 5 7899999999999998742 23457
Q ss_pred ccceeEEEEeeCCCeeE-eeecCCeEEEEEeec
Q psy11524 291 TGSVYDLVWSSDATQIA-GACANGSLLLGTIIQ 322 (323)
Q Consensus 291 ~~~v~~~~~s~~g~~l~-s~~~dg~i~~~~l~~ 322 (323)
...|.+++|+|+|++|+ +++.||.|++|++.+
T Consensus 321 ~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 88999999999999998 899999999999854
No 33
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.6e-36 Score=251.86 Aligned_cols=238 Identities=17% Similarity=0.192 Sum_probs=206.1
Q ss_pred cceeeec-CCCCCEEEEEEcCCC-CeEEEEeeCCeEEEEeCCCCc-------eeEeeccCCCeEEEEECCCCCEEEEEcC
Q psy11524 72 LSLCRTL-NVSPPVYSAAWSPDS-NKVLLTQAKSLVIKPLSPNNK-------ATKWQAHDGLILKVAWCSSTDLILSGGE 142 (323)
Q Consensus 72 ~~~~~~~-~~~~~v~~~~~sp~~-~~l~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 142 (323)
..+..++ .|.+.|++++|+|++ ++|++++.| +.|++|+.... ...+.+|...|.+++|+|++++|++++.
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D-~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~ 85 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRD-KTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASW 85 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETT-SEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCC-ccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeC
Confidence 3444555 499999999999976 788888777 69999987532 4568899999999999999999999999
Q ss_pred CCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeeecCCCCccEEEEEEcCC---
Q psy11524 143 DCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSND--- 217 (323)
Q Consensus 143 d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~--- 217 (323)
|++|+ +||+. ++.+..+.+|...|.+++|+|++.+|++++.| .|++||+++.....+.+|...+.++.|+|.
T Consensus 86 D~~v~---~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~ 162 (319)
T 3frx_A 86 DKTLR---LWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKA 162 (319)
T ss_dssp TSEEE---EEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC---
T ss_pred CCEEE---EEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCC
Confidence 99999 99995 66778889999999999999999999999997 999999998888888899999999999995
Q ss_pred ---CCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCC
Q psy11524 218 ---ATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKP 289 (323)
Q Consensus 218 ---~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~ 289 (323)
+..|++++.|+ |++||+++++.... +.+|...|.+++|+|++ ..|++++.++.+++|++... ....
T Consensus 163 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g----~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 236 (319)
T 3frx_A 163 DDDSVTIISAGNDKMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDG----TLIASAGKDGEIMLWNLAAKKAMYTLSA 236 (319)
T ss_dssp ---CCEEEEEETTSCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTS----SEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred CCCccEEEEEeCCCEEEEEECCcchhhee--ecCCCCcEEEEEEcCCC----CEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 44899999999 99999999988877 78999999999999999 78888888888999988764 2222
Q ss_pred CccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 290 DTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 290 ~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
...|.+++|+|++.+|++++.+ .+++|++.
T Consensus 237 -~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~ 266 (319)
T 3frx_A 237 -QDEVFSLAFSPNRYWLAAATAT-GIKVFSLD 266 (319)
T ss_dssp -CSCEEEEEECSSSSEEEEEETT-EEEEEEET
T ss_pred -CCcEEEEEEcCCCCEEEEEcCC-CcEEEEeC
Confidence 5689999999999999888755 58999863
No 34
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.5e-38 Score=265.26 Aligned_cols=270 Identities=14% Similarity=0.094 Sum_probs=207.3
Q ss_pred EeecccceeEeeEeccCCcceeeeeecc---cccccc---ceeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCC
Q psy11524 39 TIRRYDGTVINYPISPYISVLHSYAASH---SWPQAL---SLCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSP 111 (323)
Q Consensus 39 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~ 111 (323)
....+.++|.++.|+|++..++....++ .|+... +....+ .|...|.+++|+|++++|++++.+ +.|++|+.
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-~~v~vwd~ 84 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-RNAYVYEK 84 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-SSEEEC--
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-CeEEEEEc
Confidence 3455678999999999996444332322 244221 233334 389999999999999999999877 59999998
Q ss_pred CCc-----eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCC----eeeEeec-CCCceeEEEEecCCCEE
Q psy11524 112 NNK-----ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGR----QLYSSLT-HDHPISSLAWAPGGDMF 181 (323)
Q Consensus 112 ~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~----~~~~~~~-~~~~v~~~~~~p~~~~l 181 (323)
... ...+..|...|.+++|+|++++|++++.|+.|+ +||++.. ....+.. |...|.+++|+|++++|
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~---iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVIS---VCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEE---ECCC-----CCCCEEECSSCCSCEEEEEECTTSSEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEE---EEEECCcccceeeeEeecccCCCeEEEEEcCCCCEE
Confidence 753 455678999999999999999999999999999 9999644 3566776 89999999999999999
Q ss_pred EEEeCC-eEEEEeCC-------------------CCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCce-
Q psy11524 182 AVGSYN-TLRLCDKV-------------------GWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSS- 239 (323)
Q Consensus 182 ~~~~~~-~i~i~d~~-------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~- 239 (323)
++++.| .|++||++ +.....+ .|...|.+++|+|++++|++++.|+ |++||+++++.
T Consensus 162 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~ 240 (377)
T 3dwl_C 162 AAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQP 240 (377)
T ss_dssp EEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSC
T ss_pred EEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCc
Confidence 999996 99999984 1223334 7899999999999999999999999 99999999887
Q ss_pred ---eeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-------------------------------
Q psy11524 240 ---SNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS------------------------------- 285 (323)
Q Consensus 240 ---~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~------------------------------- 285 (323)
+.. +..|...|.+++|+|++ ..|+.++. +.+.+|.....
T Consensus 241 ~~~~~~--~~~~~~~v~~~~~s~~~----~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (377)
T 3dwl_C 241 PRALIT--VKLSQLPLRSLLWANES----AIVAAGYN-YSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEG 313 (377)
T ss_dssp EEECCC--EECSSSCEEEEEEEETT----EEEEEESS-SSEEEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC--
T ss_pred ceeeEe--ecCCCCceEEEEEcCCC----CEEEEEcC-CcEEEEEeCCCceEEEeeeccccccccccccccccccccccc
Confidence 555 67889999999999998 66666543 34445554310
Q ss_pred -------------------------cCCCCccceeEEEEeeCCC----eeEeeecCCeEEEEEe
Q psy11524 286 -------------------------LDKPDTGSVYDLVWSSDAT----QIAGACANGSLLLGTI 320 (323)
Q Consensus 286 -------------------------~~~~~~~~v~~~~~s~~g~----~l~s~~~dg~i~~~~l 320 (323)
....|...|+++++.+... .|+|++.||.|++|++
T Consensus 314 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 314 PVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp -----------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 1122889999999776543 5999999999999985
No 35
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.5e-36 Score=253.37 Aligned_cols=233 Identities=12% Similarity=0.076 Sum_probs=204.8
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCC
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG 156 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~ 156 (323)
.|...|++++|+|++++|++++.| +.|++||.... ...+..|...|.+++|+|+|.++++++.|+.++ +|++..
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~D-g~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~---v~~~~~ 137 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQD-GKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCS---VYPLTF 137 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEE---EEECCC
T ss_pred CCCCeEEEEEECCCCCEEEEEeCC-CeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEE---EEEEec
Confidence 499999999999999999999877 69999997654 566778889999999999999999999999999 999842
Q ss_pred -------CeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCC-CeeeecCCCCccEEEEEEcC--CCCEEEEEe
Q psy11524 157 -------RQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVG-WSHSLDKPDTGSVYDLVWSN--DATQIAGAC 225 (323)
Q Consensus 157 -------~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~-~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~ 225 (323)
.....+..|...|.+++|+|++..|++++.| +|++||++. ..+..+.+|...|.+++|+| +|++|++++
T Consensus 138 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 138 DKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp CTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEE
T ss_pred cccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEe
Confidence 2345677899999999999999999999997 999999874 46667788999999999988 578999999
Q ss_pred cCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCC--CCccceeEEE
Q psy11524 226 ANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDK--PDTGSVYDLV 298 (323)
Q Consensus 226 ~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~--~~~~~v~~~~ 298 (323)
.|+ |++||+++++++.. +..|...|.+++|+|++ ..+++++.++.+++|++... ... .+...+.+++
T Consensus 218 ~Dg~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~p~~----~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~ 291 (354)
T 2pbi_B 218 CDKKAMVWDMRSGQCVQA--FETHESDVNSVRYYPSG----DAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVD 291 (354)
T ss_dssp TTSCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEE
T ss_pred CCCeEEEEECCCCcEEEE--ecCCCCCeEEEEEeCCC----CEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEE
Confidence 999 99999999999888 78899999999999998 89999999999999998653 111 2235789999
Q ss_pred EeeCCCeeEeeecCCeEEEEEee
Q psy11524 299 WSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 299 ~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
|+|+|++|++++.|+.|++|++.
T Consensus 292 ~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 292 FSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp ECTTSSEEEEEETTSCEEEEETT
T ss_pred EeCCCCEEEEEECCCcEEEEECC
Confidence 99999999999999999999974
No 36
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.8e-37 Score=258.49 Aligned_cols=272 Identities=13% Similarity=0.144 Sum_probs=218.1
Q ss_pred eEeecccceeEeeEeccC---Ccc-eeeeeecc---ccccc-cceeeecC------CCCCEEEEEEcCC----CCeEEEE
Q psy11524 38 LTIRRYDGTVINYPISPY---ISV-LHSYAASH---SWPQA-LSLCRTLN------VSPPVYSAAWSPD----SNKVLLT 99 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~---~~~-~~~~~~~~---~~~~~-~~~~~~~~------~~~~v~~~~~sp~----~~~l~~~ 99 (323)
....+|.+.|.+++|+|+ +.. +.....++ .|+.. .+..+.+. |...|++++|+|+ +++|+++
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 445699999999999985 321 22122222 35522 33323332 6789999999999 6688888
Q ss_pred eeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECC-CCCEEEEEcCCCceEeeeEEeCC-CCeeeEe---ecCCCceeEE
Q psy11524 100 QAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCS-STDLILSGGEDCKYKASFVWDTD-GRQLYSS---LTHDHPISSL 172 (323)
Q Consensus 100 ~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~---~~~~~~v~~~ 172 (323)
+.+ +.|++|+.... ...+..|...|.+++|+| ++++|++++.||.|+ +||++ ++....+ ..|...|.++
T Consensus 92 ~~d-g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~---iwd~~~~~~~~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 92 GSR-GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALR---LWNIQTDTLVAIFGGVEGHRDEVLSA 167 (366)
T ss_dssp ETT-CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEE---EEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred cCC-CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEE---EEEeecCeEEEEecccccccCceeEE
Confidence 766 69999998755 667788999999999999 899999999999999 99996 4555555 5789999999
Q ss_pred EEecCCCEEEEEeCC-eEEEEeCCCCee-----------------------------eecCCCCccEEEEEEcCCCCEEE
Q psy11524 173 AWAPGGDMFAVGSYN-TLRLCDKVGWSH-----------------------------SLDKPDTGSVYDLVWSNDATQIA 222 (323)
Q Consensus 173 ~~~p~~~~l~~~~~~-~i~i~d~~~~~~-----------------------------~~~~~~~~~v~~~~~~~~~~~l~ 222 (323)
+|+|++++|++++.| .|++||++.... .....|...|.+++|+ +++|+
T Consensus 168 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 245 (366)
T 3k26_A 168 DYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL 245 (366)
T ss_dssp EECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEE
T ss_pred EECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEE
Confidence 999999999999996 999999875321 1222388899999999 67999
Q ss_pred EEecCc-EEEEEcCCCce--------------eeeecCCCCccceEEEEEccC--CCCccceEEEEeCCCCeEEEecccc
Q psy11524 223 GACANV-IHIFDISSSSS--------------SNVTAPLSHSHEITQLAVNQT--GSLQERHVAFIDKNRDLYLSMWSHS 285 (323)
Q Consensus 223 ~~~~d~-i~iwd~~~~~~--------------~~~~~~~~~~~~v~~~~~~p~--g~~~d~~l~~~~~~~~~~~~~~~~~ 285 (323)
+++.|+ |++||+++++. +.. +..|...|.+++|+|+ + ..|++++.++.+.+|++...
T Consensus 246 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~s~~~~~----~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 246 SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGR--FDYSQCDIWYMRFSMDFWQ----KMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEE--EECSSCCSSCCCCEECTTS----SEEEEECTTSCEEEEECCSS
T ss_pred EEecCCEEEEEeCCCccccccccccCCcchheecc--ccccCCcEEEEEEcCCCCC----cEEEEEecCCcEEEEECCCC
Confidence 999999 99999987754 444 5678888999999999 8 89999999999999998764
Q ss_pred --------cCCCC--ccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 286 --------LDKPD--TGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 286 --------~~~~~--~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
....| ...|.+++|+|++++|++++.||.|++|++.
T Consensus 320 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 320 DPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 34445 6899999999999999999999999999985
No 37
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-36 Score=251.17 Aligned_cols=237 Identities=16% Similarity=0.247 Sum_probs=193.8
Q ss_pred eeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc----eeEe-ec-cCCCeEEEEECCCCCEEEEEcCCCceE
Q psy11524 75 CRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK----ATKW-QA-HDGLILKVAWCSSTDLILSGGEDCKYK 147 (323)
Q Consensus 75 ~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~----~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~ 147 (323)
.+.+ .|...|.+++|+|+ +|++++.+ +.|++|+.... ...+ .. |...|.+++|+|++++|++++.|++|+
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D-~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 83 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTD-RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVS 83 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESS-SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCC-CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 3444 49999999999998 88888777 69999998753 2334 34 999999999999999999999999999
Q ss_pred eeeEEeCC--------CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCC-C----CeeeecCCCCccEEEEE
Q psy11524 148 ASFVWDTD--------GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKV-G----WSHSLDKPDTGSVYDLV 213 (323)
Q Consensus 148 ~i~v~d~~--------~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~-~----~~~~~~~~~~~~v~~~~ 213 (323)
+||++ .+.+..+.+|...|.+++|+|++++|++++.| .|++||++ . .....+.+|...|.+++
T Consensus 84 ---iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~ 160 (330)
T 2hes_X 84 ---IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVI 160 (330)
T ss_dssp ---EEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEE
T ss_pred ---EEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEE
Confidence 99984 23456678899999999999999999999997 99999984 2 13456778999999999
Q ss_pred EcCCCCEEEEEecCc-EEEEEcCCC--ceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-----
Q psy11524 214 WSNDATQIAGACANV-IHIFDISSS--SSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----- 285 (323)
Q Consensus 214 ~~~~~~~l~~~~~d~-i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----- 285 (323)
|+|++++|++++.|+ |++||..++ +++.. +.+|...|.+++|+|++. ...++.++.++.+++|++...
T Consensus 161 ~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~--~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 161 WHPSEALLASSSYDDTVRIWKDYDDDWECVAV--LNGHEGTVWSSDFDKTEG--VFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEE--ECCCSSCEEEEEECCSSS--SCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCCeeEEEE--ccCCCCcEEEEEecCCCC--eeEEEEEeCCCeEEEEEecCCCcccc
Confidence 999999999999999 999998876 45666 789999999999999831 057888999999999987542
Q ss_pred -------cC-CCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 286 -------LD-KPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 286 -------~~-~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
.. ..|...|.+++|++++ +|++++.||.|++|++.+
T Consensus 237 ~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 237 QEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD 280 (330)
T ss_dssp EEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET
T ss_pred ceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC
Confidence 12 2378999999999765 899999999999999753
No 38
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.5e-37 Score=257.84 Aligned_cols=237 Identities=17% Similarity=0.276 Sum_probs=197.6
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc----eeEeeccCCCeEEEEECC--CCCEEEEEcCCCceEeeeEE
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK----ATKWQAHDGLILKVAWCS--STDLILSGGEDCKYKASFVW 152 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~----~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~i~v~ 152 (323)
.|...|++++|+|+|++|++++.| +.|++||.... ...+.+|.+.|.+++|+| ++++|++++.|++|+ +|
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D-~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~---iW 86 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSD-RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI---IW 86 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETT-TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE---EE
T ss_pred cccCeEEEeeEcCCCCEEEEEeCC-CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE---EE
Confidence 499999999999999999999877 59999998653 456889999999999986 489999999999999 99
Q ss_pred eCCC---CeeeEeecCCCceeEEEEecC--CCEEEEEeCC-eEEEEeCCCC-e---eeecCCCCccEEEEEEcCC-----
Q psy11524 153 DTDG---RQLYSSLTHDHPISSLAWAPG--GDMFAVGSYN-TLRLCDKVGW-S---HSLDKPDTGSVYDLVWSND----- 217 (323)
Q Consensus 153 d~~~---~~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~~-~i~i~d~~~~-~---~~~~~~~~~~v~~~~~~~~----- 217 (323)
|++. .....+.+|...|.+++|+|+ +.+|++++.| .|++||++.. . ......|...+.+++|+|+
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 9964 355667789999999999997 7899999997 9999998753 1 2355678889999999997
Q ss_pred ------------CCEEEEEecCc-EEEEEcCCC---ceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEe
Q psy11524 218 ------------ATQIAGACANV-IHIFDISSS---SSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSM 281 (323)
Q Consensus 218 ------------~~~l~~~~~d~-i~iwd~~~~---~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~ 281 (323)
+++|++++.|+ |++||++.+ +.+.. +.+|...|.+++|+|++......|++++.|+.+++|+
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~--l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~ 244 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQK--LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWT 244 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEEC--CBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEE
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeee--cccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEE
Confidence 47899999999 999999765 34444 7889999999999998521125788999999999998
Q ss_pred cccc--------cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 282 WSHS--------LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 282 ~~~~--------~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
+... ....|...|.+++|+|+|++|++++.||.|++|+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 245 CDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred ccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 7651 223467899999999999999999999999999974
No 39
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.6e-36 Score=255.75 Aligned_cols=236 Identities=11% Similarity=0.124 Sum_probs=195.0
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeC-----CeEEEEeCCCCc------eeEeeccCCCeEEEEECCCCCEEEEEcCCCceE
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAK-----SLVIKPLSPNNK------ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYK 147 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~-----~~~v~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 147 (323)
.|...|++++|||||++|++++.+ ++.+++|+.... ......|...|.+++|+|++.+ ++++.||+|+
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~ 118 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGI-LVASDSGAVE 118 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEE-EEEETTSCEE
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCE-EEEECCCEEE
Confidence 389999999999999999999863 478999987543 3345678899999999999764 5677899999
Q ss_pred eeeEEeCCC-Cee----eEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCC-
Q psy11524 148 ASFVWDTDG-RQL----YSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDAT- 219 (323)
Q Consensus 148 ~i~v~d~~~-~~~----~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~- 219 (323)
+||+.. +.. ....+|...|.+++|+|++++|++++.+ .|++||+++. ....+..|...|.+++|+|++.
T Consensus 119 ---lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~ 195 (357)
T 4g56_B 119 ---LWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDT 195 (357)
T ss_dssp ---EC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSS
T ss_pred ---EeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCc
Confidence 999953 222 2344788999999999999999999996 9999998854 5567788999999999999875
Q ss_pred EEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccce
Q psy11524 220 QIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSV 294 (323)
Q Consensus 220 ~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v 294 (323)
++++++.|+ |++||++++++........+...+.+++|+|++. ..+++++.++.+++|++... ....|...|
T Consensus 196 ~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~---~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v 272 (357)
T 4g56_B 196 IFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKD---DTFACGDETGNVSLVNIKNPDSAQTSAVHSQNI 272 (357)
T ss_dssp CEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTST---TEEEEEESSSCEEEEESSCGGGCEEECCCSSCE
T ss_pred eeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhccc---ceEEEeecccceeEEECCCCcEeEEEeccceeE
Confidence 788999999 9999999998877644556778899999999862 67888999999999998765 456788999
Q ss_pred eEEEEeeCC-CeeEeeecCCeEEEEEee
Q psy11524 295 YDLVWSSDA-TQIAGACANGSLLLGTII 321 (323)
Q Consensus 295 ~~~~~s~~g-~~l~s~~~dg~i~~~~l~ 321 (323)
++++|+|++ ++|++|+.|++|++|++.
T Consensus 273 ~~l~~sp~~~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred EEEEEcCCCCCEEEEEeCCCEEEEEECC
Confidence 999999997 578999999999999874
No 40
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.5e-36 Score=257.07 Aligned_cols=240 Identities=17% Similarity=0.210 Sum_probs=199.8
Q ss_pred ceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccC------------------CCeEEEEECC
Q psy11524 73 SLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHD------------------GLILKVAWCS 132 (323)
Q Consensus 73 ~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~------------------~~v~~~~~~~ 132 (323)
++.+.+.|...|.+++|+|+|++|++++. +.+++|+.... ...+..+. ..|.+++|+|
T Consensus 56 ~~~~~~~h~~~V~~v~fspdg~~la~g~~--~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~ 133 (393)
T 1erj_A 56 ELHKSLDHTSVVCCVKFSNDGEYLATGCN--KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP 133 (393)
T ss_dssp EEEEEEECSSCCCEEEECTTSSEEEEECB--SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT
T ss_pred eeEEecCCCCEEEEEEECCCCCEEEEEcC--CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC
Confidence 34456679999999999999999998764 36888887654 33443332 2489999999
Q ss_pred CCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeeecCCCCccEE
Q psy11524 133 STDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSLDKPDTGSVY 210 (323)
Q Consensus 133 ~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~~~~~~~~v~ 210 (323)
+|++|++++.|+.|+ +||++ ++.+..+.+|...|.+++|+|++++|++++.| +|++||+++........+...+.
T Consensus 134 dg~~l~s~~~d~~i~---iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~ 210 (393)
T 1erj_A 134 DGKFLATGAEDRLIR---IWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVT 210 (393)
T ss_dssp TSSEEEEEETTSCEE---EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE
T ss_pred CCCEEEEEcCCCeEE---EEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcE
Confidence 999999999999999 99996 55667788899999999999999999999997 99999998665443334677899
Q ss_pred EEEEcC-CCCEEEEEecCc-EEEEEcCCCceeeeec-----CCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecc
Q psy11524 211 DLVWSN-DATQIAGACANV-IHIFDISSSSSSNVTA-----PLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWS 283 (323)
Q Consensus 211 ~~~~~~-~~~~l~~~~~d~-i~iwd~~~~~~~~~~~-----~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~ 283 (323)
+++|+| ++++|++++.|+ |++||+++++.+..+. ..+|...|.+++|+|++ ..+++++.++.+++|++.
T Consensus 211 ~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g----~~l~s~s~d~~v~~wd~~ 286 (393)
T 1erj_A 211 TVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDG----QSVVSGSLDRSVKLWNLQ 286 (393)
T ss_dssp EEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTS----SEEEEEETTSEEEEEEC-
T ss_pred EEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCC----CEEEEEeCCCEEEEEECC
Confidence 999999 899999999999 9999999988776521 15688899999999999 889999999999999886
Q ss_pred cc----------------cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 284 HS----------------LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 284 ~~----------------~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
.. ....|...|.+++|+|++++|++|+.||.|++|++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~ 340 (393)
T 1erj_A 287 NANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK 340 (393)
T ss_dssp --------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred CCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 42 234578889999999999999999999999999964
No 41
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.5e-36 Score=251.92 Aligned_cols=235 Identities=16% Similarity=0.155 Sum_probs=188.3
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCC-----eEEEEeCCCCc------eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEe
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKS-----LVIKPLSPNNK------ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKA 148 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~-----~~v~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 148 (323)
+...|.+++|+|||++|+++++.. +.+++|+.... ......+...|.+++|+|++ .|++++.||+|+
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~- 106 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAVE- 106 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEEE-
T ss_pred ccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEEE-
Confidence 677899999999999998776321 23333332111 22334567889999999985 678999999999
Q ss_pred eeEEeCC-CCeee----EeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCC-E
Q psy11524 149 SFVWDTD-GRQLY----SSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDAT-Q 220 (323)
Q Consensus 149 i~v~d~~-~~~~~----~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~-~ 220 (323)
+||++ ++... ...+|...|++++|+|+|++|++++.| +|++||+++. .+..+.+|...|.+++|+|++. +
T Consensus 107 --lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 107 --LWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp --EEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred --EEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 99996 44332 245799999999999999999999997 9999998754 5667888999999999999885 7
Q ss_pred EEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCcccee
Q psy11524 221 IAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVY 295 (323)
Q Consensus 221 l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~ 295 (323)
|++++.|+ |++||+++++....+....+...+.+++|+|++. ..+++++.++.+++|++... .+..|...|+
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~ 261 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQS---EVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVT 261 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCT---TEEEEEETTSEEEEEESCC--CCEEEECCSSCEE
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCC---cceEEeccCCcEEEEECCCCcEEEEEcCCCCCEE
Confidence 88999999 9999999999888743445667899999999762 67788899999999998765 4567899999
Q ss_pred EEEEeeCC-CeeEeeecCCeEEEEEee
Q psy11524 296 DLVWSSDA-TQIAGACANGSLLLGTII 321 (323)
Q Consensus 296 ~~~~s~~g-~~l~s~~~dg~i~~~~l~ 321 (323)
+++|+|+| ++|++|+.|++|++|++.
T Consensus 262 ~v~fsp~g~~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 262 GLVFSPHSVPFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp EEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred EEEEccCCCeEEEEEeCCCeEEEEECC
Confidence 99999998 579999999999999864
No 42
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-36 Score=247.05 Aligned_cols=272 Identities=13% Similarity=0.162 Sum_probs=222.6
Q ss_pred eeeeeEeecccceeEeeEeccCCcceeeeeecc---cccc-ccceeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEE
Q psy11524 34 VKNHLTIRRYDGTVINYPISPYISVLHSYAASH---SWPQ-ALSLCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKP 108 (323)
Q Consensus 34 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~ 108 (323)
.+....+.+|.+.|.++.| |++..++....++ .|+. +.+....+ .|...|.+++|+|++++|++++.+ +.+++
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-g~i~~ 85 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD-TMING 85 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT-SCEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC-CeEEE
Confidence 3555778999999999999 8885554443333 2441 22222222 389999999999999999998877 58998
Q ss_pred eCCCCc-----eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEec-CCCEEE
Q psy11524 109 LSPNNK-----ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAP-GGDMFA 182 (323)
Q Consensus 109 ~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~ 182 (323)
|+.... ...+..|...|.+++| +++++++++.|+.|+ +|| .++....+..|...+.+++|+| ++++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~---~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 159 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAK---VWK-EGSLVYNLQAHNASVWDAKVVSFSENKFL 159 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEE---EEE-TTEEEEEEECCSSCEEEEEEEETTTTEEE
T ss_pred EEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEE---EEc-CCcEEEecccCCCceeEEEEccCCCCEEE
Confidence 886543 5677889999999999 578999999999999 999 6677788888999999999998 899999
Q ss_pred EEeCC-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccC
Q psy11524 183 VGSYN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQT 260 (323)
Q Consensus 183 ~~~~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~ 260 (323)
+++.+ .|++||...........|...+.+++|+|++. +++++.|+ |++||+++++.+.. +..|...+.+++|+|+
T Consensus 160 ~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 160 TASADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRT--YEGHESFVYCIKLLPN 236 (313)
T ss_dssp EEETTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEE--EECCSSCEEEEEECTT
T ss_pred EEECCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhh--hhcCCceEEEEEEecC
Confidence 99996 99999954433333334889999999999998 99999999 99999999999888 6789999999999999
Q ss_pred CCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 261 GSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 261 g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
+ .+++++.++.+.+|++... ....|...|.+++|+|+++ +++++.||.|++|++.+
T Consensus 237 ~-----~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 237 G-----DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp S-----CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred C-----CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 6 4778888888999988765 4455778999999999998 66799999999999854
No 43
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.9e-37 Score=267.21 Aligned_cols=271 Identities=14% Similarity=0.180 Sum_probs=203.4
Q ss_pred eeEeecccceeEeeEeccC-Ccceeeeeecccccccccee-----------eecCCCCCEEEEEEcC-CCCeEEEEeeCC
Q psy11524 37 HLTIRRYDGTVINYPISPY-ISVLHSYAASHSWPQALSLC-----------RTLNVSPPVYSAAWSP-DSNKVLLTQAKS 103 (323)
Q Consensus 37 ~~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~v~~~~~sp-~~~~l~~~~~~~ 103 (323)
.....+|+..|++++|+|. +..+ ++|+.|+++++| ....|...|++++|+| ++++|++++.|
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~l----asGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D- 186 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTV----AVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME- 186 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCE----EEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-
T ss_pred cccCCCCCCCEEEEEEeCCCCCEE----EEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-
Confidence 3456788999999999995 5444 444444433333 2235899999999998 68899988777
Q ss_pred eEEEEeCCCCc-eeEee---ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCC
Q psy11524 104 LVIKPLSPNNK-ATKWQ---AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGD 179 (323)
Q Consensus 104 ~~v~~~~~~~~-~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~ 179 (323)
+.|++||..+. ...+. .+...+.+++|+|++++|++|+.||.|+ +||++++.+..+..|...|.+++|+|++.
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~---~wd~~~~~~~~~~~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 187 GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVI---LLNMDGKELWNLRMHKKKVTHVALNPCCD 263 (435)
T ss_dssp SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEE---EEESSSCBCCCSBCCSSCEEEEEECTTCS
T ss_pred CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEe---eeccCcceeEEEecccceEEeeeecCCCc
Confidence 69999999876 33332 2344578899999999999999999999 99999988889999999999999999876
Q ss_pred -EEEEEeCC-eEEEEeCCCCe----eeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCcc--
Q psy11524 180 -MFAVGSYN-TLRLCDKVGWS----HSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSH-- 250 (323)
Q Consensus 180 -~l~~~~~~-~i~i~d~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~-- 250 (323)
+|++++.| .|++||++... .....+|...|.+++|+|+|++|++++.|+ |++||+++++.... +..|..
T Consensus 264 ~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~--~~~~~~~~ 341 (435)
T 4e54_B 264 WFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLG--LIPHPHRH 341 (435)
T ss_dssp SEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEE--ECCCCCCC
T ss_pred eEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceE--Eecccccc
Confidence 67788886 99999987432 223456889999999999999999999999 99999999877665 233221
Q ss_pred ----ceEEEEEccCCCCccceEEEEe------------CCCCeEEEecccc-----cCCCCccceeEE-EEeeCCCeeEe
Q psy11524 251 ----EITQLAVNQTGSLQERHVAFID------------KNRDLYLSMWSHS-----LDKPDTGSVYDL-VWSSDATQIAG 308 (323)
Q Consensus 251 ----~v~~~~~~p~g~~~d~~l~~~~------------~~~~~~~~~~~~~-----~~~~~~~~v~~~-~~s~~g~~l~s 308 (323)
.+....|+|++ ..+.+.. .++.+.+|+...+ +...|...|.++ +|+|+|++|++
T Consensus 342 ~~~~~~~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~las 417 (435)
T 4e54_B 342 FQHLTPIKAAWHPRY----NLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLAS 417 (435)
T ss_dssp CSSSCCCBCEECSSS----SCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEE
T ss_pred cccceeEEEEEcCCC----CEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEE
Confidence 22344566665 3333321 1223556665543 344567888887 69999999998
Q ss_pred eecCCeEEEEEeec
Q psy11524 309 ACANGSLLLGTIIQ 322 (323)
Q Consensus 309 ~~~dg~i~~~~l~~ 322 (323)
|+ |+.|+||++.+
T Consensus 418 g~-d~~i~iW~~~~ 430 (435)
T 4e54_B 418 AM-GYHILIWSQQE 430 (435)
T ss_dssp EC-SSEEEECCCC-
T ss_pred Ec-CCcEEEEECCc
Confidence 76 88999999864
No 44
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-36 Score=256.75 Aligned_cols=272 Identities=14% Similarity=0.173 Sum_probs=220.7
Q ss_pred EeecccceeEeeEeccCCc-ceeeeeecc---cccc----c-cc------eeeecC-----------CCCCEEEEEEcCC
Q psy11524 39 TIRRYDGTVINYPISPYIS-VLHSYAASH---SWPQ----A-LS------LCRTLN-----------VSPPVYSAAWSPD 92 (323)
Q Consensus 39 ~~~~~~~~v~~~~~~~~~~-~~~~~~~~~---~~~~----~-~~------~~~~~~-----------~~~~v~~~~~sp~ 92 (323)
....|.+.|.++.|+|++. .++....++ .|+. . .+ ....+. |...|++++|+|+
T Consensus 40 ~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 119 (425)
T 1r5m_A 40 KEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD 119 (425)
T ss_dssp EEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT
T ss_pred eeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC
Confidence 3345669999999999996 555443333 2332 1 11 111121 4669999999999
Q ss_pred CCeEEEEeeCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCC-Cee-----------
Q psy11524 93 SNKVLLTQAKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG-RQL----------- 159 (323)
Q Consensus 93 ~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~-~~~----------- 159 (323)
+++|++++.+ +.|++|+..+. ...+..|...|.+++|+|++++|++++.|+.|+ +||+.. +.+
T Consensus 120 ~~~l~~~~~d-g~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~---iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 120 GNSIVTGVEN-GELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTI---LWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp SSEEEEEETT-SCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEE---EEETTTTEEEEEECCC-----
T ss_pred CCEEEEEeCC-CeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEE---EEECCCCcEEEEeeccccCcc
Confidence 9999998777 59999996555 667888999999999999999999999999999 999842 211
Q ss_pred ---------------------------------------------eEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEe
Q psy11524 160 ---------------------------------------------YSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCD 193 (323)
Q Consensus 160 ---------------------------------------------~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d 193 (323)
..+..|...|.+++|+|++++|++++.+ .|++||
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp ----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 2334567889999999999999999986 999999
Q ss_pred CCC-CeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEE
Q psy11524 194 KVG-WSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFI 271 (323)
Q Consensus 194 ~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~ 271 (323)
++. .....+..|...+.+++|+|++ ++++++.|+ |++||+++++.+.. +..|...+.+++|+|++ ..++++
T Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~i~~~~~s~~~----~~l~~~ 348 (425)
T 1r5m_A 276 GGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLAL--SIVDGVPIFAGRISQDG----QKYAVA 348 (425)
T ss_dssp SSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEE--EECTTCCEEEEEECTTS----SEEEEE
T ss_pred CCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEe--cccCCccEEEEEEcCCC----CEEEEE
Confidence 875 4555667789999999999999 999999999 99999999998887 67788899999999998 899999
Q ss_pred eCCCCeEEEecccc------------------------cCCCCcc--ceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 272 DKNRDLYLSMWSHS------------------------LDKPDTG--SVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 272 ~~~~~~~~~~~~~~------------------------~~~~~~~--~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
+.++.+.+|++... ....|.. .|.+++|+|++++|++++.||.|++|++.
T Consensus 349 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 349 FMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred ECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 99999999998642 2344544 99999999999999999999999999974
No 45
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=3.6e-36 Score=257.15 Aligned_cols=276 Identities=12% Similarity=0.087 Sum_probs=222.6
Q ss_pred eeeeeEeecccceeEeeEeccCCcceeeeeecc---ccccc-cc------eee-ecCCCCCEEEEEEcCC----C---Ce
Q psy11524 34 VKNHLTIRRYDGTVINYPISPYISVLHSYAASH---SWPQA-LS------LCR-TLNVSPPVYSAAWSPD----S---NK 95 (323)
Q Consensus 34 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~-~~------~~~-~~~~~~~v~~~~~sp~----~---~~ 95 (323)
+.....+.+|.+.|.++.|+| ..++....++ .|+.. .+ ... ...|...|.+++|+|+ + ++
T Consensus 6 ~~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~ 83 (397)
T 1sq9_A 6 IATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCL 83 (397)
T ss_dssp EEEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEE
T ss_pred hhhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccE
Confidence 345567889999999999999 4444443333 35422 22 222 2358999999999999 9 99
Q ss_pred EEEEeeCCeEEEEeCCCCc-------eeEeecc-----CCCeEEEEEC----CCCCE-EEEEcCCCceEeeeEEeCCC--
Q psy11524 96 VLLTQAKSLVIKPLSPNNK-------ATKWQAH-----DGLILKVAWC----SSTDL-ILSGGEDCKYKASFVWDTDG-- 156 (323)
Q Consensus 96 l~~~~~~~~~v~~~~~~~~-------~~~~~~~-----~~~v~~~~~~----~~~~~-l~~~~~d~~i~~i~v~d~~~-- 156 (323)
|++++.+ +.|++|+.... ...+..| ...|.+++|+ |++++ |++++.||.|+ +||+..
T Consensus 84 l~s~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~---iwd~~~~~ 159 (397)
T 1sq9_A 84 VATTSFS-GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTY---IWKFHPFA 159 (397)
T ss_dssp EEEEETT-SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEE---EEEEESSS
T ss_pred EEEEcCC-CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEE---EEeCCccc
Confidence 9988776 59999986543 4566777 5899999999 99999 99999999999 999854
Q ss_pred -----Ceee-----Ee-------ecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCC-eeeecCC---C---CccEEE
Q psy11524 157 -----RQLY-----SS-------LTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGW-SHSLDKP---D---TGSVYD 211 (323)
Q Consensus 157 -----~~~~-----~~-------~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~-~~~~~~~---~---~~~v~~ 211 (323)
+.+. .+ ..+...+.+++|+|++ ++++++.+ .|++||++.. ....+.. | ...+.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~ 238 (397)
T 1sq9_A 160 DESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRS 238 (397)
T ss_dssp SHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEE
T ss_pred cccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccce
Confidence 4444 55 3478899999999999 99999986 9999998854 4555666 7 889999
Q ss_pred EEEcCCCCEEEEEecC---c-EEEEEcCCCceeeeecCCC-------------CccceEEEEEccCCCCccceEEEEeCC
Q psy11524 212 LVWSNDATQIAGACAN---V-IHIFDISSSSSSNVTAPLS-------------HSHEITQLAVNQTGSLQERHVAFIDKN 274 (323)
Q Consensus 212 ~~~~~~~~~l~~~~~d---~-i~iwd~~~~~~~~~~~~~~-------------~~~~v~~~~~~p~g~~~d~~l~~~~~~ 274 (323)
++|+|++++|++++.| + |++||+++++.+.. +.. |...|.+++|+|++ ..|++++.+
T Consensus 239 i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d 312 (397)
T 1sq9_A 239 VKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGS--LSVPTHSSQASLGEFAHSSWVMSLSFNDSG----ETLCSAGWD 312 (397)
T ss_dssp EEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEE--ECBC--------CCBSBSSCEEEEEECSSS----SEEEEEETT
T ss_pred EEECCCCCEEEEEecCCCCceEEEEECCCCcccce--eccCcccccccccccccCCcEEEEEECCCC----CEEEEEeCC
Confidence 9999999999999999 9 99999999998887 566 88999999999998 788888888
Q ss_pred CCeEEEecccc----cCC------CC---------------ccceeEEEEeeCC----------CeeEeeecCCeEEEEE
Q psy11524 275 RDLYLSMWSHS----LDK------PD---------------TGSVYDLVWSSDA----------TQIAGACANGSLLLGT 319 (323)
Q Consensus 275 ~~~~~~~~~~~----~~~------~~---------------~~~v~~~~~s~~g----------~~l~s~~~dg~i~~~~ 319 (323)
+.+.+|++... ... .| ...|.+++|+|+| ++|++++.||.|++|+
T Consensus 313 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 313 GKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp SEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred CeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 88888888664 223 45 8899999999998 7999999999999999
Q ss_pred eec
Q psy11524 320 IIQ 322 (323)
Q Consensus 320 l~~ 322 (323)
+.+
T Consensus 393 ~~~ 395 (397)
T 1sq9_A 393 EAG 395 (397)
T ss_dssp EEC
T ss_pred cCC
Confidence 864
No 46
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=5.4e-35 Score=242.02 Aligned_cols=235 Identities=16% Similarity=0.248 Sum_probs=201.8
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD- 155 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~- 155 (323)
.|...|++++|+|++++|++++.+ +.|++|+.... ...+..|...|.+++|+|++++|++++.|+.|+ +||++
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~d-g~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~---vwd~~~ 96 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSAD-KLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLK---IWDVSS 96 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETT-SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE---EEETTT
T ss_pred ccCCcEEEEEECCCCCEEEEeeCC-CeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEE---EEECCC
Confidence 589999999999999999998777 59999998654 567789999999999999999999999999999 99995
Q ss_pred CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCC-CeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEE
Q psy11524 156 GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVG-WSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIF 232 (323)
Q Consensus 156 ~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iw 232 (323)
++.+..+..|...|.+++|+|++++|++++.| .|++||++. .....+..|...+.+++|+|++++|++++.|+ |++|
T Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~w 176 (312)
T 4ery_A 97 GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIW 176 (312)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 67778889999999999999999999999996 999999874 45667778999999999999999999999999 9999
Q ss_pred EcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccc---eeEEEEeeCCCe
Q psy11524 233 DISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGS---VYDLVWSSDATQ 305 (323)
Q Consensus 233 d~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~---v~~~~~s~~g~~ 305 (323)
|+++++.+..+ ...+...+..++|+|++ ..+++++.++.+.+|++... ....|... +......+++++
T Consensus 177 d~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (312)
T 4ery_A 177 DTASGQCLKTL-IDDDNPPVSFVKFSPNG----KYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKW 251 (312)
T ss_dssp ETTTCCEEEEE-CCSSCCCEEEEEECTTS----SEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCE
T ss_pred ECCCCceeeEE-eccCCCceEEEEECCCC----CEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcE
Confidence 99999887763 34566789999999998 88889999999999998764 23334332 222333467889
Q ss_pred eEeeecCCeEEEEEeec
Q psy11524 306 IAGACANGSLLLGTIIQ 322 (323)
Q Consensus 306 l~s~~~dg~i~~~~l~~ 322 (323)
|++|+.||.|++|++.+
T Consensus 252 l~sg~~dg~i~vwd~~~ 268 (312)
T 4ery_A 252 IVSGSEDNLVYIWNLQT 268 (312)
T ss_dssp EEECCTTSCEEEEETTT
T ss_pred EEEECCCCEEEEEECCC
Confidence 99999999999999753
No 47
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.6e-35 Score=246.30 Aligned_cols=235 Identities=12% Similarity=0.150 Sum_probs=198.1
Q ss_pred eec-CCCCCEEEEEE-----cC-CCCeEEEEeeCCeEEEEeCCCCc---------eeEeeccCCCeEEEEECCCCCEEEE
Q psy11524 76 RTL-NVSPPVYSAAW-----SP-DSNKVLLTQAKSLVIKPLSPNNK---------ATKWQAHDGLILKVAWCSSTDLILS 139 (323)
Q Consensus 76 ~~~-~~~~~v~~~~~-----sp-~~~~l~~~~~~~~~v~~~~~~~~---------~~~~~~~~~~v~~~~~~~~~~~l~~ 139 (323)
..+ .|...|++++| +| ++++|++|+.| +.|++|+.... ...+.+|...|.+++|+|++.++++
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D-~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRD-KTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETT-SCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCC-CEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 344 49999999999 77 89999998877 59999987532 3467899999999999999999999
Q ss_pred EcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeeec---CCCCccEEEEEE
Q psy11524 140 GGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSLD---KPDTGSVYDLVW 214 (323)
Q Consensus 140 ~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~~---~~~~~~v~~~~~ 214 (323)
++.|++|+ +||++ ++.+..+.+|...|.+++|+|++++|++++.| .|++||+.+...... ..|...+.+++|
T Consensus 94 ~s~D~~v~---lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 94 SSWDKTLR---LWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EETTSEEE---EEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEE
T ss_pred EcCCCcEE---EEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeee
Confidence 99999999 99995 67778889999999999999999999999996 999999886544333 268889999999
Q ss_pred cCCC----------CEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecc
Q psy11524 215 SNDA----------TQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWS 283 (323)
Q Consensus 215 ~~~~----------~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~ 283 (323)
+|++ .+|++++.|+ |++|| ...+.... +..|...|.+++|+|++ ..|++++.++.+++|++.
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~--~~~h~~~v~~~~~s~~g----~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYT--FKAHESNVNHLSISPNG----KYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEE--EECCSSCEEEEEECTTS----SEEEEEETTCEEEEEESS
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEE--EcCccccceEEEECCCC----CEEEEEcCCCeEEEEECC
Confidence 9987 7899999999 99999 44555555 67899999999999999 899999999999999984
Q ss_pred cccCC----CCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 284 HSLDK----PDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 284 ~~~~~----~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
..... .+...|.+++|+|++++|++ +.|+.|++|++..
T Consensus 244 ~~~~~~~~~~~~~~v~~v~~sp~~~~la~-~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 244 NLTYPQREFDAGSTINQIAFNPKLQWVAV-GTDQGVKIFNLMT 285 (343)
T ss_dssp CCSSCSEEEECSSCEEEEEECSSSCEEEE-EESSCEEEEESSS
T ss_pred CCcccceeecCCCcEEEEEECCCCCEEEE-ECCCCEEEEEeCC
Confidence 32111 13567999999999987765 5688899999753
No 48
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-35 Score=249.62 Aligned_cols=233 Identities=15% Similarity=0.248 Sum_probs=202.7
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc----eeEeeccCCCeEEEEECCC--CCEEEEEcCCCceEeeeEE
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK----ATKWQAHDGLILKVAWCSS--TDLILSGGEDCKYKASFVW 152 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~i~v~ 152 (323)
.|...|++++|+|++++|++++.+ +.|++|+.... ...+..|...|.+++|+|+ +++|++++.||.|+ +|
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~---iw 84 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCSSD-KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL---IW 84 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEETT-SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE---EE
T ss_pred CCcccEEEEEEcCCCCEEEEEECC-CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE---EE
Confidence 399999999999999999998777 69999998632 4567889999999999987 89999999999999 99
Q ss_pred eCCCC---eeeEeecCCCceeEEEEecC--CCEEEEEeCC-eEEEEeCCCC---eeeecCCCCccEEEEEEcC-------
Q psy11524 153 DTDGR---QLYSSLTHDHPISSLAWAPG--GDMFAVGSYN-TLRLCDKVGW---SHSLDKPDTGSVYDLVWSN------- 216 (323)
Q Consensus 153 d~~~~---~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~~-~i~i~d~~~~---~~~~~~~~~~~v~~~~~~~------- 216 (323)
|+... ....+..|...|.+++|+|+ +.+|++++.+ .|++||++.. .......|...|.+++|+|
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 164 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 164 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-----
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccc
Confidence 99644 56677789999999999999 9999999996 9999998754 3335567889999999999
Q ss_pred ------CCCEEEEEecCc-EEEEEcCCCce----eeeecCCCCccceEEEEEccC---CCCccceEEEEeCCCCeEEEec
Q psy11524 217 ------DATQIAGACANV-IHIFDISSSSS----SNVTAPLSHSHEITQLAVNQT---GSLQERHVAFIDKNRDLYLSMW 282 (323)
Q Consensus 217 ------~~~~l~~~~~d~-i~iwd~~~~~~----~~~~~~~~~~~~v~~~~~~p~---g~~~d~~l~~~~~~~~~~~~~~ 282 (323)
++.+|++++.|+ |++||+++++. ... +..|...|.+++|+|+ + ..+++++.++.+.+|++
T Consensus 165 ~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~h~~~v~~~~~sp~~~~~----~~l~s~~~dg~i~iwd~ 238 (379)
T 3jrp_A 165 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST--LEGHSDWVRDVAWSPTVLLR----SYLASVSQDRTCIIWTQ 238 (379)
T ss_dssp -----CTTCEEEEEETTSCEEEEEEETTTTEEEEEEE--ECCCSSCEEEEEECCCCSSS----EEEEEEETTSCEEEEEE
T ss_pred cccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEE--EecccCcEeEEEECCCCCCC----CeEEEEeCCCEEEEEeC
Confidence 699999999999 99999987653 233 6789999999999999 7 89999999999999998
Q ss_pred ccc---------cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 283 SHS---------LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 283 ~~~---------~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
... ....|...|.+++|+|+|++|++++.||.|++|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 239 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 763 222368899999999999999999999999999985
No 49
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.7e-36 Score=255.03 Aligned_cols=270 Identities=12% Similarity=0.110 Sum_probs=198.8
Q ss_pred cceeEeeEeccCCcceeeeeeccc---cccccceeee------------------c-CCCCCEEEEEEcCCCCeEEEEee
Q psy11524 44 DGTVINYPISPYISVLHSYAASHS---WPQALSLCRT------------------L-NVSPPVYSAAWSPDSNKVLLTQA 101 (323)
Q Consensus 44 ~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~------------------~-~~~~~v~~~~~sp~~~~l~~~~~ 101 (323)
..+|++++|+||+..++....... .+..+++|.. + .|...|.++++ +++.++++..
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~--~~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA--SKGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE--ETTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe--CCCEEEEEEC
Confidence 458999999999965554322111 1122333321 2 25667777765 4567776643
Q ss_pred C----------CeEEEEeCCCCc---eeE--------eeccCCCeEEEEECCCCCEEEE--EcCCCceEeeeEEeCCCCe
Q psy11524 102 K----------SLVIKPLSPNNK---ATK--------WQAHDGLILKVAWCSSTDLILS--GGEDCKYKASFVWDTDGRQ 158 (323)
Q Consensus 102 ~----------~~~v~~~~~~~~---~~~--------~~~~~~~v~~~~~~~~~~~l~~--~~~d~~i~~i~v~d~~~~~ 158 (323)
+ +..+++|+.... ... ...+...+.+++|+|||+++++ ++.|++|+ +||++...
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~---iwd~~~~~ 168 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMR---IIDPSDLT 168 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEE---EEETTTTE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEE---EeECCCCc
Confidence 2 346788875432 111 1223456889999999998765 44789999 99997444
Q ss_pred eeEeecCCCceeEEEEecCCCEEEEEeCCeEEEEeCC-CCeee--ecCCCCccEEEEEEcCCCCEEEEEecCc-----EE
Q psy11524 159 LYSSLTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKV-GWSHS--LDKPDTGSVYDLVWSNDATQIAGACANV-----IH 230 (323)
Q Consensus 159 ~~~~~~~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~-~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----i~ 230 (323)
......|...|.+++|+|||+++++++.+.+.+|+.. +.... ....|...+.+++|+|+++++++++.++ ++
T Consensus 169 ~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~ 248 (365)
T 4h5i_A 169 EKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLT 248 (365)
T ss_dssp EEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEE
T ss_pred EEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEe
Confidence 4333457788999999999999999998867777654 54332 4456888899999999999999988764 67
Q ss_pred EEEcCCCcee--eeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-----cCCCCccceeEEEEeeCC
Q psy11524 231 IFDISSSSSS--NVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-----LDKPDTGSVYDLVWSSDA 303 (323)
Q Consensus 231 iwd~~~~~~~--~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~s~~g 303 (323)
+||+...... ....+.+|...|++++|+|+| .+|++++.|+.+++|++... +..+|...|++++|||||
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg----~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg 324 (365)
T 4h5i_A 249 KISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG----ELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDS 324 (365)
T ss_dssp EEEEETTEEEEEEEEEEESSCSCEEEEEECTTS----CEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTS
T ss_pred ecccccceecceeeeeecCCCCCeEeEEECCCC----CceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCC
Confidence 7887765432 121256788899999999999 89999999999999999775 457899999999999999
Q ss_pred CeeEeeecCCeEEEEEeec
Q psy11524 304 TQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 304 ~~l~s~~~dg~i~~~~l~~ 322 (323)
++||+|+.|++|+||+|..
T Consensus 325 ~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 325 TYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp CEEEEEETTSEEEEEECCT
T ss_pred CEEEEEeCCCeEEEEEcCC
Confidence 9999999999999999853
No 50
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-36 Score=260.47 Aligned_cols=272 Identities=10% Similarity=0.095 Sum_probs=221.6
Q ss_pred cccceeEeeEeccCCcceeeeeecc---cccccc-----ceeeec-CCCCCEEEEEEcCC-CCeEEEEeeCCeEEEEeCC
Q psy11524 42 RYDGTVINYPISPYISVLHSYAASH---SWPQAL-----SLCRTL-NVSPPVYSAAWSPD-SNKVLLTQAKSLVIKPLSP 111 (323)
Q Consensus 42 ~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~-~~~~~v~~~~~sp~-~~~l~~~~~~~~~v~~~~~ 111 (323)
.|...|.++.|+|++..++....++ .|+... +....+ .|...|.+++|+|+ +++|++++.+ +.|++|+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-g~v~iwd~ 143 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNN-GEIFIWDM 143 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSS-SCEEBCBT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCC-CeEEEEEC
Confidence 5889999999999997776555544 355332 233444 48999999999998 8888888766 69999998
Q ss_pred CCce------e-----EeeccCCCeEEEEECCC-CCEEEEEcCCCceEeeeEEeCC-CCeeeEeecC------CCceeEE
Q psy11524 112 NNKA------T-----KWQAHDGLILKVAWCSS-TDLILSGGEDCKYKASFVWDTD-GRQLYSSLTH------DHPISSL 172 (323)
Q Consensus 112 ~~~~------~-----~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~------~~~v~~~ 172 (323)
.... . ....|...|.+++|+|+ +.+|++++.|+.|+ +||++ ++.+..+..+ ...+.++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~---iwd~~~~~~~~~~~~~~~~~~~~~~v~~~ 220 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFAS---IWDLKAKKEVIHLSYTSPNSGIKQQLSVV 220 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEE---EEETTTTEEEEEECCCCCSSCCCCCEEEE
T ss_pred CCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEE---EEECCCCCcceEEeccccccccCCceEEE
Confidence 7543 1 23568899999999999 78999999999999 99996 5555666555 7889999
Q ss_pred EEecCC-CEEEEEeCC----eEEEEeCCC--CeeeecC-CCCccEEEEEEcC-CCCEEEEEecCc-EEEEEcCCCceeee
Q psy11524 173 AWAPGG-DMFAVGSYN----TLRLCDKVG--WSHSLDK-PDTGSVYDLVWSN-DATQIAGACANV-IHIFDISSSSSSNV 242 (323)
Q Consensus 173 ~~~p~~-~~l~~~~~~----~i~i~d~~~--~~~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~d~-i~iwd~~~~~~~~~ 242 (323)
+|+|++ .++++++.+ .|++||++. .....+. +|...|.+++|+| ++++|++++.|+ |++||+++++.+..
T Consensus 221 ~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~ 300 (416)
T 2pm9_A 221 EWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQ 300 (416)
T ss_dssp EECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEE
T ss_pred EECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcccee
Confidence 999997 678888884 899999885 3455566 7999999999999 999999999999 99999999999888
Q ss_pred ecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccccC-----------------------------------
Q psy11524 243 TAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSLD----------------------------------- 287 (323)
Q Consensus 243 ~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~~~----------------------------------- 287 (323)
+..|...|.+++|+|++. ..+++++.++.+.+|++.....
T Consensus 301 --~~~~~~~v~~~~~s~~~~---~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (416)
T 2pm9_A 301 --FPARGNWCFKTKFAPEAP---DLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFH 375 (416)
T ss_dssp --EECSSSCCCCEEECTTCT---TEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSC
T ss_pred --ecCCCCceEEEEECCCCC---CEEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccccccccc
Confidence 678899999999999973 5777777777888887765310
Q ss_pred ----CCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 288 ----KPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 288 ----~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
..|..++.+++|+|+|++|++++.||.|++|++..
T Consensus 376 ~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~ 414 (416)
T 2pm9_A 376 LQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKI 414 (416)
T ss_dssp CCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCC
T ss_pred ccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEecc
Confidence 01466788999999999999999999999999864
No 51
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.7e-36 Score=254.16 Aligned_cols=239 Identities=17% Similarity=0.217 Sum_probs=201.1
Q ss_pred ceeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEee
Q psy11524 73 SLCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKAS 149 (323)
Q Consensus 73 ~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i 149 (323)
.+.+.+ .|.+.|++++|+|++++|++|+.| +.|++||.... ...+..|...|.+++|+|++++|++++.|+.++
T Consensus 57 ~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D-~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~-- 133 (380)
T 3iz6_a 57 VCCRTLQGHSGKVYSLDWTPEKNWIVSASQD-GRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACS-- 133 (380)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSCEEEEETT-SEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCE--
T ss_pred EEeecccccccEEEEEEEcCCCCEEEEEeCC-CeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEE--
Confidence 344555 499999999999999999999877 59999998665 667889999999999999999999999999999
Q ss_pred eEEeCCC--------CeeeEeecCCCceeEEEEecC-CCEEEEEeCC-eEEEEeCCCC-eeeec-----CCCCccEEEEE
Q psy11524 150 FVWDTDG--------RQLYSSLTHDHPISSLAWAPG-GDMFAVGSYN-TLRLCDKVGW-SHSLD-----KPDTGSVYDLV 213 (323)
Q Consensus 150 ~v~d~~~--------~~~~~~~~~~~~v~~~~~~p~-~~~l~~~~~~-~i~i~d~~~~-~~~~~-----~~~~~~v~~~~ 213 (323)
+|++.. .....+.+|...+.++.|+|+ +..|++++.| +|++||++.. ....+ .+|...+.+++
T Consensus 134 -iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 134 -IFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp -EEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred -EEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 999842 123457789999999999996 4568999887 9999998754 44333 56888999999
Q ss_pred EcC-CCCEEEEEecCc-EEEEEcC-CCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----c
Q psy11524 214 WSN-DATQIAGACANV-IHIFDIS-SSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----L 286 (323)
Q Consensus 214 ~~~-~~~~l~~~~~d~-i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~ 286 (323)
|+| ++++|++++.|+ |++||++ .++.+.. +.+|...|.+++|+|++ ..+++++.|+.+++|++... .
T Consensus 213 ~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~--~~~h~~~v~~v~~~p~~----~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 213 INSLNANMFISGSCDTTVRLWDLRITSRAVRT--YHGHEGDINSVKFFPDG----QRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp ECSSSCCEEEEEETTSCEEEEETTTTCCCCEE--ECCCSSCCCEEEECTTS----SEEEEECSSSCEEEEETTTTEEEEE
T ss_pred eecCCCCEEEEEECCCeEEEEECCCCCcceEE--ECCcCCCeEEEEEecCC----CeEEEEcCCCeEEEEECCCCcEEEE
Confidence 987 889999999999 9999998 4566666 68899999999999998 78888888999999988764 1
Q ss_pred CC-------CCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 287 DK-------PDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 287 ~~-------~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
.. .+...|.+++|+|+|++|++|+.||.|++|++.
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred ecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 11 122358999999999999999999999999963
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=9.3e-36 Score=256.53 Aligned_cols=266 Identities=14% Similarity=0.096 Sum_probs=209.9
Q ss_pred eEeeEeccCCcceeeeeecc---cccc-ccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeec
Q psy11524 47 VINYPISPYISVLHSYAASH---SWPQ-ALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQA 120 (323)
Q Consensus 47 v~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~ 120 (323)
+.+++|+|+++.++....++ .|+. +.+....+.....+....|+|++++|++++.+ +.|++|+.... ...+..
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-g~i~iwd~~~~~~~~~~~~ 137 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGTTE-GDIKVLDSNFNLQREIDQA 137 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEETT-SCEEEECTTSCEEEEETTS
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEECC-CCEEEEeCCCcceeeeccc
Confidence 44789999996665544433 2432 12222223333445556789999999998777 59999998776 344568
Q ss_pred cCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCC-
Q psy11524 121 HDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGW- 197 (323)
Q Consensus 121 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~- 197 (323)
|...|.+++|+|++++|++++.|+.|+ +||++ ++.+..+.+|...|.+++|+|++++|++++.| .|++||++..
T Consensus 138 h~~~v~~~~~~~~~~~l~s~s~d~~i~---iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 138 HVSEITKLKFFPSGEALISSSQDMQLK---IWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp SSSCEEEEEECTTSSEEEEEETTSEEE---EEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccCccEEEEECCCCCEEEEEeCCCeEE---EEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 999999999999999999999999999 99995 67778888999999999999999999999996 9999998854
Q ss_pred eeeecCC---CCccEE---------------------EEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccce
Q psy11524 198 SHSLDKP---DTGSVY---------------------DLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEI 252 (323)
Q Consensus 198 ~~~~~~~---~~~~v~---------------------~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v 252 (323)
....+.. +...+. +++|+|++++|++++.|+ |++||+++++.+... ...|...+
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~v 293 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQL-PSKFTCSC 293 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEE-CCTTSSCE
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEc-ccccCCCc
Confidence 3333332 333444 455578999999999999 999999999877763 45688899
Q ss_pred EEEEEccCCCCccc-eEEEEeCCCCeEEEecccc------cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 253 TQLAVNQTGSLQER-HVAFIDKNRDLYLSMWSHS------LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 253 ~~~~~~p~g~~~d~-~l~~~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
.+++|+|++ . .+++++.++.+.+|++... +...|...|.++. .+++++|++++.||.|++|++.+
T Consensus 294 ~~~~~~~~~----~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 294 NSLTVDGNN----ANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEEEECSSC----TTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTEEEEEETTTEEEEEEEECC
T ss_pred eeEEEeCCC----CCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCCEEEEecCCccEEEEeccC
Confidence 999999998 5 8999999999999999764 1122567788885 56889999999999999999854
No 53
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-35 Score=255.80 Aligned_cols=269 Identities=16% Similarity=0.193 Sum_probs=217.2
Q ss_pred cceeEeeEeccCCc-ceeeeeecc------cccccccee-----------eecCCCCCEEEEEEcCCCCeEEEEeeCCeE
Q psy11524 44 DGTVINYPISPYIS-VLHSYAASH------SWPQALSLC-----------RTLNVSPPVYSAAWSPDSNKVLLTQAKSLV 105 (323)
Q Consensus 44 ~~~v~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~-----------~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~ 105 (323)
...|.+++|+|+++ .++.....+ +.|...++| ..+.|...|++++|+|++++|++++.+ +.
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~ 90 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDN-GS 90 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESS-SC
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccC-Ce
Confidence 34788999999986 444332211 333333333 344588999999999999999998776 69
Q ss_pred EEEeCCCC------ceeEeeccCCCeEEEEECCC-CCEEEEEcCCCceEeeeEEeCCCCe-------ee---EeecCCCc
Q psy11524 106 IKPLSPNN------KATKWQAHDGLILKVAWCSS-TDLILSGGEDCKYKASFVWDTDGRQ-------LY---SSLTHDHP 168 (323)
Q Consensus 106 v~~~~~~~------~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~i~v~d~~~~~-------~~---~~~~~~~~ 168 (323)
|++|+... ....+..|...|.+++|+|+ +++|++++.|+.|+ +||+.... .. ....|...
T Consensus 91 v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~---iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (416)
T 2pm9_A 91 LELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIF---IWDMNKCTESPSNYTPLTPGQSMSSVDE 167 (416)
T ss_dssp EEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEE---BCBTTTTSSCTTTCCCBCCCCSCCSSCC
T ss_pred EEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEE---EEECCCCccccccccccccccccCCCCC
Confidence 99999876 25677889999999999998 89999999999999 99996332 22 23568889
Q ss_pred eeEEEEecC-CCEEEEEeCC-eEEEEeCCCC-eeeecCCC------CccEEEEEEcCCC-CEEEEEecC----cEEEEEc
Q psy11524 169 ISSLAWAPG-GDMFAVGSYN-TLRLCDKVGW-SHSLDKPD------TGSVYDLVWSNDA-TQIAGACAN----VIHIFDI 234 (323)
Q Consensus 169 v~~~~~~p~-~~~l~~~~~~-~i~i~d~~~~-~~~~~~~~------~~~v~~~~~~~~~-~~l~~~~~d----~i~iwd~ 234 (323)
|.+++|+|+ +.+|++++.+ .|++||++.. ....+..+ ...+.+++|+|++ .++++++.| .|++||+
T Consensus 168 v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~ 247 (416)
T 2pm9_A 168 VISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDL 247 (416)
T ss_dssp CCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEET
T ss_pred eeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeC
Confidence 999999998 7889998886 9999998865 44444444 7889999999997 688888887 3999999
Q ss_pred CCC-ceeeeecCC-CCccceEEEEEcc-CCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCC-Cee
Q psy11524 235 SSS-SSSNVTAPL-SHSHEITQLAVNQ-TGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDA-TQI 306 (323)
Q Consensus 235 ~~~-~~~~~~~~~-~~~~~v~~~~~~p-~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g-~~l 306 (323)
+++ +++.. +. +|...|.+++|+| ++ ..+++++.++.+.+|++... ....|...|.+++|+|++ ++|
T Consensus 248 ~~~~~~~~~--~~~~~~~~v~~~~~s~~~~----~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l 321 (416)
T 2pm9_A 248 RNANTPLQT--LNQGHQKGILSLDWCHQDE----HLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLF 321 (416)
T ss_dssp TSTTSCSBC--CCSCCSSCEEEEEECSSCS----SCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEE
T ss_pred CCCCCCcEE--eecCccCceeEEEeCCCCC----CeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEE
Confidence 986 55555 56 7999999999999 77 78888999999999998764 445678999999999999 899
Q ss_pred EeeecCCeEEEEEeec
Q psy11524 307 AGACANGSLLLGTIIQ 322 (323)
Q Consensus 307 ~s~~~dg~i~~~~l~~ 322 (323)
++++.||.|++|++.+
T Consensus 322 ~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 322 ACASFDNKIEVQTLQN 337 (416)
T ss_dssp EECCSSSEEEEEESCC
T ss_pred EEEecCCcEEEEEccC
Confidence 9999999999999853
No 54
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.9e-35 Score=250.21 Aligned_cols=271 Identities=14% Similarity=0.175 Sum_probs=215.2
Q ss_pred EeecccceeEeeEeccCCcceeeeeecc---cccc-ccceeeec--CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCC
Q psy11524 39 TIRRYDGTVINYPISPYISVLHSYAASH---SWPQ-ALSLCRTL--NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPN 112 (323)
Q Consensus 39 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~ 112 (323)
...+|...+....+++++..++....++ .|+. +.+....+ .|...|++++|+|++++|++++.+ +.|++|+..
T Consensus 86 ~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d-g~i~iwd~~ 164 (401)
T 4aez_A 86 DAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN-GLVDIYDVE 164 (401)
T ss_dssp ECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT-SCEEEEETT
T ss_pred eCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC-CeEEEEECc
Confidence 3446665544433443333343333333 3542 23332333 378999999999999999998777 699999987
Q ss_pred Cc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC--CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-
Q psy11524 113 NK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD--GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN- 187 (323)
Q Consensus 113 ~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~--~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~- 187 (323)
.. ...+..|...|.+++| +++.|++++.||.|+ +||++ ......+..|...|.+++|+|++++|++++.|
T Consensus 165 ~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~---i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 239 (401)
T 4aez_A 165 SQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIH---HHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDN 239 (401)
T ss_dssp TCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEE---EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEE---EEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCC
Confidence 65 6778899999999999 467999999999999 99996 56677888899999999999999999999996
Q ss_pred eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCC-EEEEEe--cCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCC
Q psy11524 188 TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDAT-QIAGAC--ANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGS 262 (323)
Q Consensus 188 ~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~-~l~~~~--~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~ 262 (323)
.|++||++.. ....+..|...|.+++|+|++. ++++++ .|+ |++||+++++.+.. + .+...+.+++|+|++
T Consensus 240 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~--~-~~~~~v~~~~~s~~~- 315 (401)
T 4aez_A 240 VVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNT--V-DAGSQVTSLIWSPHS- 315 (401)
T ss_dssp CEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEE--E-ECSSCEEEEEECSSS-
T ss_pred eEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEE--E-eCCCcEEEEEECCCC-
Confidence 9999998854 5556778999999999999775 555554 688 99999999998887 3 456789999999998
Q ss_pred CccceEEEE--eCCCCeEEEecccc------cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 263 LQERHVAFI--DKNRDLYLSMWSHS------LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 263 ~~d~~l~~~--~~~~~~~~~~~~~~------~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
..+++. ..++.+.+|++... ....|...|.+++|+|+|++|++++.||.|++|++.+
T Consensus 316 ---~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 316 ---KEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp ---SEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred ---CeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 777774 37888999988763 2456789999999999999999999999999999854
No 55
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-35 Score=252.72 Aligned_cols=270 Identities=9% Similarity=0.066 Sum_probs=210.4
Q ss_pred eeEe-ecccceeEeeEecc-CCcceeeeeecccccccccee--------------eecCCCCCEEEEEEcCCCCeEEEEe
Q psy11524 37 HLTI-RRYDGTVINYPISP-YISVLHSYAASHSWPQALSLC--------------RTLNVSPPVYSAAWSPDSNKVLLTQ 100 (323)
Q Consensus 37 ~~~~-~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~v~~~~~sp~~~~l~~~~ 100 (323)
...+ ++|.+.|.+++|+| ++..++ +++.|++.++| ..+.|...|++++|+|++++|++++
T Consensus 55 ~~~~~~~h~~~V~~~~~s~~~~~~l~----s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s 130 (437)
T 3gre_A 55 IATLMENEPNSITSSAVSPGETPYLI----TGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSS 130 (437)
T ss_dssp EEEECTTTTSCEEEEEEECSSSCEEE----EEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred EeeeccCCCCceEEEEECCCCCCEEE----EecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEe
Confidence 3456 88999999999999 995444 44444333333 2335899999999999999999988
Q ss_pred eCCeEEEEeCCC----Cc-eeEee----------c--cCCCeEEEE--ECCCCCEEEEEcCCCceEeeeEEeCC-CCeee
Q psy11524 101 AKSLVIKPLSPN----NK-ATKWQ----------A--HDGLILKVA--WCSSTDLILSGGEDCKYKASFVWDTD-GRQLY 160 (323)
Q Consensus 101 ~~~~~v~~~~~~----~~-~~~~~----------~--~~~~v~~~~--~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~ 160 (323)
.+ +.|++|+.. +. ..... . +...+.++. ++|++.+|++++.|+.|+ +||++ ++.+.
T Consensus 131 ~d-g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~---iwd~~~~~~~~ 206 (437)
T 3gre_A 131 KD-GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVI---IFDIRTLERLQ 206 (437)
T ss_dssp TT-SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEE---EEETTTCCEEE
T ss_pred CC-CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEE---EEeCCCCeeeE
Confidence 77 699999873 21 11111 1 456677776 668899999999999999 99995 67777
Q ss_pred Eeec--CCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCe-eeecC-CCCccEEEEEEcC----CCCEEEEEecCc-EE
Q psy11524 161 SSLT--HDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWS-HSLDK-PDTGSVYDLVWSN----DATQIAGACANV-IH 230 (323)
Q Consensus 161 ~~~~--~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~-~~~~~-~~~~~v~~~~~~~----~~~~l~~~~~d~-i~ 230 (323)
.+.. |...|.+++|+|++++|++++.| .|++||++... +..+. .|...|.+++|+| ++.+|++++.|+ |+
T Consensus 207 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~ 286 (437)
T 3gre_A 207 IIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLT 286 (437)
T ss_dssp EEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEE
T ss_pred EEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEE
Confidence 7877 78999999999999999999996 99999988653 34433 6778999996664 688999999999 99
Q ss_pred EEEcCCCceeeeec----------------------CCC--CccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-
Q psy11524 231 IFDISSSSSSNVTA----------------------PLS--HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS- 285 (323)
Q Consensus 231 iwd~~~~~~~~~~~----------------------~~~--~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~- 285 (323)
+||+++++.+..+. +.+ |...|.+++|+ ++ ..|+.++.++.+++|++...
T Consensus 287 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~----~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 287 IWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND----KILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp EEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT----EEEEEEGGGTEEEEEETTCGG
T ss_pred EEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc----eEEEecCCCCeEEEEECCCcc
Confidence 99999988766532 111 66678888998 55 67888888888888887654
Q ss_pred ---cC-------------------------------------CCCccceeEEEEeeC--CCeeEeeecCCeEEEEE
Q psy11524 286 ---LD-------------------------------------KPDTGSVYDLVWSSD--ATQIAGACANGSLLLGT 319 (323)
Q Consensus 286 ---~~-------------------------------------~~~~~~v~~~~~s~~--g~~l~s~~~dg~i~~~~ 319 (323)
.. ..|...|++++|+++ +.+|++|+.||.|++|+
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 362 SSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp GCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 11 127899999999999 77999999999999995
No 56
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-35 Score=260.87 Aligned_cols=271 Identities=10% Similarity=0.030 Sum_probs=200.1
Q ss_pred eEeecccceeEeeEeccCCcce--eeeeeccccccccceeee-------------------c-CCCCCEEEEEEcCCCCe
Q psy11524 38 LTIRRYDGTVINYPISPYISVL--HSYAASHSWPQALSLCRT-------------------L-NVSPPVYSAAWSPDSNK 95 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-------------------~-~~~~~v~~~~~sp~~~~ 95 (323)
..+.+|.+.|.+++|+|++... ..++++++.|+++++|.. + .|...|++++|+|++ .
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~ 279 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-T 279 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-E
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-e
Confidence 3467788999999999972100 134555555555554431 2 377899999999864 7
Q ss_pred EEEEeeCCeEEEEeCCCCc---eeEeeccCCCeEEE--EECCCC-CEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCC-
Q psy11524 96 VLLTQAKSLVIKPLSPNNK---ATKWQAHDGLILKV--AWCSST-DLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDH- 167 (323)
Q Consensus 96 l~~~~~~~~~v~~~~~~~~---~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~- 167 (323)
|++|+.| +.|++||.... ...+..|...|.++ +|+|++ .+|++++.|++|+ +||++ ++....+.+|..
T Consensus 280 lasgs~D-gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk---lWD~~~~~~~~~~~~~~~~ 355 (524)
T 2j04_B 280 VVCGFKN-GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY---IFNPKDIATTKTTVSRFRG 355 (524)
T ss_dssp EEEEETT-SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE---EECGGGHHHHCEEEEECSC
T ss_pred EEEEeCC-CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE---EEECCCCCccccccccccc
Confidence 8888766 69999998753 34578999999999 578888 8999999999999 99995 444445555543
Q ss_pred -ceeEEEEecCCCEEEEEeCC-eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeee
Q psy11524 168 -PISSLAWAPGGDMFAVGSYN-TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVT 243 (323)
Q Consensus 168 -~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~ 243 (323)
.|.+++|+|+++.+++++.+ +|++||++.. ....+.+|.+.|.+++|+|+|++|++|+.|+ |++||+..+ .+..
T Consensus 356 ~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~- 433 (524)
T 2j04_B 356 SNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHG- 433 (524)
T ss_dssp CSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTC-
T ss_pred CcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccc-
Confidence 58899999999999998886 9999998754 4455667999999999999999999999999 999997653 2222
Q ss_pred cCCC-----CccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc---cCCCCccceeEEEEeeCCC---eeEeeecC
Q psy11524 244 APLS-----HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS---LDKPDTGSVYDLVWSSDAT---QIAGACAN 312 (323)
Q Consensus 244 ~~~~-----~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~---~l~s~~~d 312 (323)
... +...+.+++|+|++ +.+.+++. -.+..|..... ...+|...|.+++|+|+++ .||+|+.|
T Consensus 434 -~~~~~~~~~~~~v~~v~~sp~g----~~~~~~~~-~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~ 507 (524)
T 2j04_B 434 -IKNSSATQKSLRLWKWDYSIKD----DKYRIDSS-YEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSA 507 (524)
T ss_dssp -C------CCCCEEEECBCCSSS----CEEEECCC-CCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTT
T ss_pred -cccCccceeeeEEEEeccCCCC----CeEEccCC-ceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccC
Confidence 111 11257899999998 66766552 12222221111 4556889999999999964 99999999
Q ss_pred CeEEEEEee
Q psy11524 313 GSLLLGTII 321 (323)
Q Consensus 313 g~i~~~~l~ 321 (323)
|.|+||++.
T Consensus 508 g~vrlw~l~ 516 (524)
T 2j04_B 508 GLLTLEYLS 516 (524)
T ss_dssp SEEEEEECS
T ss_pred ceEEEEEcc
Confidence 999999974
No 57
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.1e-34 Score=277.81 Aligned_cols=274 Identities=13% Similarity=0.159 Sum_probs=220.7
Q ss_pred eEeecccceeEeeEeccCCcceeeeeecc---ccc-cccceeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCC
Q psy11524 38 LTIRRYDGTVINYPISPYISVLHSYAASH---SWP-QALSLCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPN 112 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~ 112 (323)
..+.+|.+.|.+++|+|+++.+++...++ .|+ .+.+....+ .|...|.+++|+|+|++|++++.+ +.|++||..
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-~~v~vwd~~ 687 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSAD-KKVKIWDSA 687 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-SEEEEEETT
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCC-CeEEEEECC
Confidence 56789999999999999996665544443 254 233333444 389999999999999999998877 599999987
Q ss_pred Cc--eeEeeccCCCeEEEEECC--CCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeCC
Q psy11524 113 NK--ATKWQAHDGLILKVAWCS--STDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN 187 (323)
Q Consensus 113 ~~--~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~ 187 (323)
+. ...+..|...|.+++|+| ++.++++++.|+.|+ +||++ ++....+.+|...|.+++|+|+++++++++.|
T Consensus 688 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~---vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 688 TGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLK---LWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp TCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEE---EEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS
T ss_pred CCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEE---EEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC
Confidence 65 677889999999999999 456899999999999 99995 67778888999999999999999999999996
Q ss_pred -eEEEEeCCCCee-e-------------------------------------------------------ecCCCCccEE
Q psy11524 188 -TLRLCDKVGWSH-S-------------------------------------------------------LDKPDTGSVY 210 (323)
Q Consensus 188 -~i~i~d~~~~~~-~-------------------------------------------------------~~~~~~~~v~ 210 (323)
.|++||++.... . ...+|...+.
T Consensus 765 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~ 844 (1249)
T 3sfz_A 765 GTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQ 844 (1249)
T ss_dssp SEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCC
T ss_pred CeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceE
Confidence 999999753311 0 1125677899
Q ss_pred EEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEe--------
Q psy11524 211 DLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSM-------- 281 (323)
Q Consensus 211 ~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~-------- 281 (323)
+++|+|+++++++++.++ |++||+.+++.+.. +.+|...|.+++|+|++ ..+.+++.++.+.+|+
T Consensus 845 ~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg----~~l~s~s~dg~v~vw~~~~~~~~~ 918 (1249)
T 3sfz_A 845 YCDFSPYDHLAVIALSQYCVELWNIDSRLKVAD--CRGHLSWVHGVMFSPDG----SSFLTASDDQTIRVWETKKVCKNS 918 (1249)
T ss_dssp EEEECSSTTEEEEECSSSCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTS----SEEEEEETTSCEEEEEHHHHHSCC
T ss_pred EEEEcCCCCEEEEEeCCCeEEEEEcCCCceeee--cCCCccceEEEEECCCC----CEEEEEeCCCeEEEEEccccceee
Confidence 999999999999999999 99999999998888 78999999999999998 4555555555555554
Q ss_pred -----------------------------------------------------------------------cccc----c
Q psy11524 282 -----------------------------------------------------------------------WSHS----L 286 (323)
Q Consensus 282 -----------------------------------------------------------------------~~~~----~ 286 (323)
+... .
T Consensus 919 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~ 998 (1249)
T 3sfz_A 919 AIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSS 998 (1249)
T ss_dssp SSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEE
T ss_pred eecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeee
Confidence 3222 2
Q ss_pred CCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 287 DKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 287 ~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
...|...|.+++|+|+|++|++++.||.|++|++.
T Consensus 999 ~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 999 GVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp CCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETT
T ss_pred cccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 34567778888888888888888888888888763
No 58
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4e-34 Score=265.99 Aligned_cols=276 Identities=15% Similarity=0.173 Sum_probs=232.0
Q ss_pred eeeEeecccceeEeeEeccCCcceeeeeecc---ccc-cccceeeecC-CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeC
Q psy11524 36 NHLTIRRYDGTVINYPISPYISVLHSYAASH---SWP-QALSLCRTLN-VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLS 110 (323)
Q Consensus 36 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~ 110 (323)
....+.+|.+.|.+++|+|++..++....++ .|+ .+.+..+.+. |..+|.+++|+|++++|++++.+ +.|++|+
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-g~i~vw~ 83 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-FRIRVFN 83 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-SEEEEEE
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC-CeEEEEE
Confidence 3467789999999999999998777666555 476 4555555554 89999999999999999998776 6999999
Q ss_pred CCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCC--CeeeEeecCCCceeEEEEec-CCCEEEEEe
Q psy11524 111 PNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG--RQLYSSLTHDHPISSLAWAP-GGDMFAVGS 185 (323)
Q Consensus 111 ~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~--~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~ 185 (323)
..+. ...+..|.+.|.+++|+|++++|++++.||.|+ +||++. .....+..|...|.+++|+| ++..+++++
T Consensus 84 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~---vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVK---LWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEE---EEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEE
T ss_pred CCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEE---EEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEe
Confidence 8765 667888999999999999999999999999999 999963 45667788999999999999 888999999
Q ss_pred CC-eEEEEeCCCC-eee-ecCCCCccEEEEEEcC--CCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEcc
Q psy11524 186 YN-TLRLCDKVGW-SHS-LDKPDTGSVYDLVWSN--DATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQ 259 (323)
Q Consensus 186 ~~-~i~i~d~~~~-~~~-~~~~~~~~v~~~~~~~--~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p 259 (323)
.+ .|++||+.+. ... ....+...+.+++|+| ++.+|++++.|+ |++||+++++.+.. +..|...|.+++|+|
T Consensus 161 ~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~ 238 (814)
T 3mkq_A 161 LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVAT--LEGHMSNVSFAVFHP 238 (814)
T ss_dssp TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEE--EECCSSCEEEEEECS
T ss_pred CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEE--EcCCCCCEEEEEEcC
Confidence 96 9999998743 333 3344558899999999 999999999999 99999999998887 678899999999999
Q ss_pred CCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCee-EeeecCCeEEEEEee
Q psy11524 260 TGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQI-AGACANGSLLLGTII 321 (323)
Q Consensus 260 ~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l-~s~~~dg~i~~~~l~ 321 (323)
++ ..+++++.++.+.+|+.... ....|...+.+++|+|+|+.+ ++++.|+.+.+|++.
T Consensus 239 ~~----~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (814)
T 3mkq_A 239 TL----PIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (814)
T ss_dssp SS----SEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECS
T ss_pred CC----CEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcC
Confidence 98 78999999999999998764 445567899999999999743 555567778888763
No 59
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.7e-34 Score=243.26 Aligned_cols=232 Identities=18% Similarity=0.325 Sum_probs=201.1
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc----eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK----ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD 155 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~ 155 (323)
|..+|++++|+|++++|++++.+ +.|++|+.... ...+..|...|.+++|+|++++|++++.|+.|+ +||++
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d-~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~---vwd~~ 82 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNN-HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAY---VWTLK 82 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSS-SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEE---EEEEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCC-CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEE---EEECC
Confidence 88999999999999999988776 69999997664 556788999999999999999999999999999 99996
Q ss_pred CCe---eeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCe-----eeecCCCCccEEEEEEcCCCCEEEEEec
Q psy11524 156 GRQ---LYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWS-----HSLDKPDTGSVYDLVWSNDATQIAGACA 226 (323)
Q Consensus 156 ~~~---~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 226 (323)
... ...+..|...|.+++|+|++++|++++.+ .|++||++... ......|...+.+++|+|++++|++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 543 33346688899999999999999999996 99999987432 2344668899999999999999999999
Q ss_pred Cc-EEEEEcC------------------CCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc--
Q psy11524 227 NV-IHIFDIS------------------SSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-- 285 (323)
Q Consensus 227 d~-i~iwd~~------------------~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-- 285 (323)
|+ |++||++ .++.+.. +..|...+.+++|+|++ ..+++++.++.+.+|++...
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~i~d~~~~~~ 236 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE--SSSSCGWVHGVCFSANG----SRVAWVSHDSTVCLADADKKMA 236 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEE--CCCCSSCEEEEEECSSS----SEEEEEETTTEEEEEEGGGTTE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEe--cCCCCCeEEEEEECCCC----CEEEEEeCCCEEEEEECCCCce
Confidence 99 9999953 5677777 67899999999999998 79999999999999998765
Q ss_pred --cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 286 --LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 286 --~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
....|...|.+++|+|++++|+++ .|+.|++|++.+
T Consensus 237 ~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 237 VATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred eEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 344577899999999999988887 899999999864
No 60
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.1e-33 Score=236.99 Aligned_cols=240 Identities=18% Similarity=0.220 Sum_probs=200.3
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc------eeEeeccCCCeEEEEECC--CCCEEEEEcCCCceEeee
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK------ATKWQAHDGLILKVAWCS--STDLILSGGEDCKYKASF 150 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~------~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~i~ 150 (323)
.|.+.|++++|+|++++|++++.+ +.|++|+.... ...+..|...|.+++|+| ++++|++++.||.|+
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~--- 84 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCSSD-QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK--- 84 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETT-SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE---
T ss_pred ccccceeEEEEcCCCCEEEEeeCC-CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE---
Confidence 499999999999999999998777 69999997743 445678999999999999 699999999999999
Q ss_pred EEeCCC----------CeeeEeecCCCceeEEEEecC--CCEEEEEeCC-eEEEEeCCCCe-eee-------------cC
Q psy11524 151 VWDTDG----------RQLYSSLTHDHPISSLAWAPG--GDMFAVGSYN-TLRLCDKVGWS-HSL-------------DK 203 (323)
Q Consensus 151 v~d~~~----------~~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~~-~i~i~d~~~~~-~~~-------------~~ 203 (323)
+||++. +....+..|...|.+++|+|+ +.+|++++.| .|++||++... ... ..
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 999964 446777889999999999999 9999999996 99999986432 111 12
Q ss_pred CCCccEEEEEEcCC---CCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEE
Q psy11524 204 PDTGSVYDLVWSND---ATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYL 279 (323)
Q Consensus 204 ~~~~~v~~~~~~~~---~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~ 279 (323)
.+...+.+++|+|+ +.++++++.++ +.+|+...++......+.+|...|.+++|+|++......+++++.++.+.+
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEE
Confidence 46778999999997 89999999999 988887777653322278899999999999996211147888899999999
Q ss_pred Eecccc--------------------------------------------------cCCCCccceeEEEEeeCCCeeEee
Q psy11524 280 SMWSHS--------------------------------------------------LDKPDTGSVYDLVWSSDATQIAGA 309 (323)
Q Consensus 280 ~~~~~~--------------------------------------------------~~~~~~~~v~~~~~s~~g~~l~s~ 309 (323)
|++... ....|...|++++|+|++++|+++
T Consensus 245 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 324 (351)
T 3f3f_A 245 FKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA 324 (351)
T ss_dssp EEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE
T ss_pred EeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe
Confidence 988651 234578899999999999999999
Q ss_pred ecCCeEEEEEeec
Q psy11524 310 CANGSLLLGTIIQ 322 (323)
Q Consensus 310 ~~dg~i~~~~l~~ 322 (323)
+.||.|++|++..
T Consensus 325 ~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 325 GDDGKVRLWKATY 337 (351)
T ss_dssp ETTSCEEEEEECT
T ss_pred cCCCcEEEEecCc
Confidence 9999999999853
No 61
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1e-33 Score=243.98 Aligned_cols=262 Identities=16% Similarity=0.216 Sum_probs=209.9
Q ss_pred eEeeEeccCCcceeeeeecc--ccc-cccceeeec---CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEe
Q psy11524 47 VINYPISPYISVLHSYAASH--SWP-QALSLCRTL---NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKW 118 (323)
Q Consensus 47 v~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~ 118 (323)
++.+.||+++ .|+..+... .|| .++++.+.+ .|...|++++|+|+|++|++|+.+ +.|++|+.... +..+
T Consensus 108 ~~~l~wS~~n-~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-g~v~iWd~~~~~~~~~~ 185 (420)
T 4gga_A 108 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-AEVQLWDVQQQKRLRNM 185 (420)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-SCEEEEETTTTEEEEEE
T ss_pred ceeEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-CeEEEEEcCCCcEEEEE
Confidence 4557788754 444333221 476 344444433 477899999999999999998877 69999998766 6778
Q ss_pred eccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC--CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCC
Q psy11524 119 QAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD--GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKV 195 (323)
Q Consensus 119 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~--~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~ 195 (323)
.+|...+.+++|+ +..|++++.|+.++ +||.. ...+..+.+|...+..+.|+|+++++++++.| .+++||..
T Consensus 186 ~~h~~~v~~~s~~--~~~l~sgs~d~~i~---~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 186 TSHSARVGSLSWN--SYILSSGSRSGHIH---HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSEEE---EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred eCCCCceEEEeeC--CCEEEEEeCCCcee---EeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeec
Confidence 8999999988875 67999999999999 99985 55667788999999999999999999999996 99999976
Q ss_pred CC-----eeeecCCCCccEEEEEEcCCCC-EEEEE--ecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccc
Q psy11524 196 GW-----SHSLDKPDTGSVYDLVWSNDAT-QIAGA--CANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQER 266 (323)
Q Consensus 196 ~~-----~~~~~~~~~~~v~~~~~~~~~~-~l~~~--~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~ 266 (323)
.. .......|...|.+++|+|++. .++++ +.|+ |++||+.+++.... +. +...+.++.|+|++ +
T Consensus 261 ~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~--~~-~~~~v~~~~~~~~~----~ 333 (420)
T 4gga_A 261 PGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA--VD-AHSQVCSILWSPHY----K 333 (420)
T ss_dssp CCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE--EE-CSSCEEEEEEETTT----T
T ss_pred cccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee--ec-cccceeeeeecCCC----C
Confidence 42 2345667889999999999654 55543 4688 99999999998887 33 44578899999998 6
Q ss_pred eEEEEe--CCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 267 HVAFID--KNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 267 ~l~~~~--~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
.+.+.. .++.+.+|++... .+.+|.+.|++++|+|||++|++|+.|++|++|++.+
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 666554 5788888888765 5567999999999999999999999999999999854
No 62
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.1e-33 Score=229.81 Aligned_cols=235 Identities=14% Similarity=0.176 Sum_probs=191.0
Q ss_pred eEeecccceeEeeEeccCCcceeeeeecccccccccee----------eec-CCCCCEEEEEEcCC--CCeEEEEeeCCe
Q psy11524 38 LTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLC----------RTL-NVSPPVYSAAWSPD--SNKVLLTQAKSL 104 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~v~~~~~sp~--~~~l~~~~~~~~ 104 (323)
..+.+|.+.|.+++|+|+|+. ++++++|++.++| ..+ .|..+|.+++|+|+ +++|++++.| +
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~----las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-~ 77 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKR----MATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-G 77 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSE----EEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-T
T ss_pred eeccCCcCceEEEEECCCCCE----EEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-C
Confidence 457799999999999999954 4455545444444 333 38999999999864 8899998877 5
Q ss_pred EEEEeCCCCc----eeEeeccCCCeEEEEECCC--CCEEEEEcCCCceEeeeEEeCCCC---eeeEeecCCCceeEEEEe
Q psy11524 105 VIKPLSPNNK----ATKWQAHDGLILKVAWCSS--TDLILSGGEDCKYKASFVWDTDGR---QLYSSLTHDHPISSLAWA 175 (323)
Q Consensus 105 ~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~i~v~d~~~~---~~~~~~~~~~~v~~~~~~ 175 (323)
.|++|+.... ...+..|...|.+++|+|+ +.+|++++.|++|+ +||++.. ....+..|...|.+++|+
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~---~wd~~~~~~~~~~~~~~h~~~v~~~~~~ 154 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVS---VVEFKENGTTSPIIIDAHAIGVNSASWA 154 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE---EEEBCSSSCBCCEEEECCSSCEEEEEEC
T ss_pred EEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEE---EEEecCCCceeeeeeecccCccceEeec
Confidence 9999998753 4556789999999999997 88999999999999 9999632 245677899999999999
Q ss_pred cC-------------CCEEEEEeCC-eEEEEeCCCC-----eeeecCCCCccEEEEEEcCCC---CEEEEEecCc-EEEE
Q psy11524 176 PG-------------GDMFAVGSYN-TLRLCDKVGW-----SHSLDKPDTGSVYDLVWSNDA---TQIAGACANV-IHIF 232 (323)
Q Consensus 176 p~-------------~~~l~~~~~~-~i~i~d~~~~-----~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~d~-i~iw 232 (323)
|+ +++|++++.| .|++||++.. ....+.+|...|.+++|+|++ .+|++++.|+ |++|
T Consensus 155 p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 155 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp CCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred CCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEE
Confidence 97 5789999997 9999998642 334677899999999999984 8999999999 9999
Q ss_pred EcCCCce---eeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEeccc
Q psy11524 233 DISSSSS---SNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSH 284 (323)
Q Consensus 233 d~~~~~~---~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~ 284 (323)
|++++.. ...+....|...|.+++|+|++ ..|++++.++.+++|+...
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g----~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG----NVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSS----CCEEEEETTSCEEEEEECT
T ss_pred EeCCCCCccceeeeecccCCCcEEEEEECCCC----CEEEEEcCCCcEEEEEECC
Confidence 9987531 1221125678899999999999 8999999999999998754
No 63
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.3e-33 Score=238.62 Aligned_cols=277 Identities=14% Similarity=0.124 Sum_probs=207.4
Q ss_pred eeEeecccceeEeeEecc-CCcceeeeeecc---ccccc-cceeeec--------------CCCCCEEEEEEcC-CCCeE
Q psy11524 37 HLTIRRYDGTVINYPISP-YISVLHSYAASH---SWPQA-LSLCRTL--------------NVSPPVYSAAWSP-DSNKV 96 (323)
Q Consensus 37 ~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~---~~~~~-~~~~~~~--------------~~~~~v~~~~~sp-~~~~l 96 (323)
...+.+|.+.|.++.|+| ++..++....++ .|+.. ......+ .|...|.+++|+| ++++|
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 456778999999999999 996555444333 24311 1111111 2889999999999 77788
Q ss_pred EEEeeCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCC---CCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeE
Q psy11524 97 LLTQAKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSS---TDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISS 171 (323)
Q Consensus 97 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~ 171 (323)
++++.+ +.|++|+.... ......+...+.++.|+|. +.++++++.++.|+ +||++ ++.+..+..|...|.+
T Consensus 116 ~s~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~d~~~~~~~~~~~~~~~~v~~ 191 (408)
T 4a11_B 116 TSSSFD-KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQ---LCDLKSGSCSHILQGHRQEILA 191 (408)
T ss_dssp EEEETT-SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEE---EEESSSSCCCEEECCCCSCEEE
T ss_pred EEEeCC-CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEE---EEeCCCcceeeeecCCCCcEEE
Confidence 887666 69999998876 3334458889999999985 45999999999999 99996 6677788889999999
Q ss_pred EEEecCCCE-EEEEeCC-eEEEEeCCCC--eeeec---------------CCCCccEEEEEEcCCCCEEEEEecCc-EEE
Q psy11524 172 LAWAPGGDM-FAVGSYN-TLRLCDKVGW--SHSLD---------------KPDTGSVYDLVWSNDATQIAGACANV-IHI 231 (323)
Q Consensus 172 ~~~~p~~~~-l~~~~~~-~i~i~d~~~~--~~~~~---------------~~~~~~v~~~~~~~~~~~l~~~~~d~-i~i 231 (323)
++|+|+++. +++++.+ .|++||++.. ..... ..|...|.+++|+|++++|++++.|+ |++
T Consensus 192 ~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~v 271 (408)
T 4a11_B 192 VSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRL 271 (408)
T ss_dssp EEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred EEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEE
Confidence 999999984 8888886 9999998643 22222 46888999999999999999999999 999
Q ss_pred EEcCCCceeeeecCCCCc----cceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCC
Q psy11524 232 FDISSSSSSNVTAPLSHS----HEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDA 303 (323)
Q Consensus 232 wd~~~~~~~~~~~~~~~~----~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g 303 (323)
||+++++.... ...+. .......+.... ...+.+...++.+.+|++... ....|...|.+++|+|++
T Consensus 272 wd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 346 (408)
T 4a11_B 272 WNSSNGENTLV--NYGKVCNNSKKGLKFTVSCGC---SSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNF 346 (408)
T ss_dssp EETTTCCBCCC--CCCCCCCCCSSCCCCEECCSS---SSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTT
T ss_pred EECCCCcccee--ccccccccccccceeEEecCC---CceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCC
Confidence 99998876554 22111 111111222221 145555566667777776554 445688999999999999
Q ss_pred CeeEeeecCCeEEEEEeec
Q psy11524 304 TQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 304 ~~l~s~~~dg~i~~~~l~~ 322 (323)
++|++++.||.|++|++..
T Consensus 347 ~~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 347 QELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp TEEEEEETTSCEEEEEECC
T ss_pred CEEEEECCCCeEEEEeCCC
Confidence 9999999999999999853
No 64
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-35 Score=251.25 Aligned_cols=229 Identities=17% Similarity=0.294 Sum_probs=190.2
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc----eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK----ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD 155 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~ 155 (323)
+..+|++++|+|++++|++++.+ +.|++|+.... ...+..|...|.+++|+|++++|++++.|+.|+ +||+.
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d-~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~---vwd~~ 85 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTAT-NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAY---VYEKR 85 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSS-SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEE---EC---
T ss_pred CCCcEEEEEECCCCCEEEEecCC-CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEE---EEEcC
Confidence 56799999999999999988776 59999998753 556788999999999999999999999999999 99996
Q ss_pred CC----eeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCe----eeecCC-CCccEEEEEEcCCCCEEEEEe
Q psy11524 156 GR----QLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWS----HSLDKP-DTGSVYDLVWSNDATQIAGAC 225 (323)
Q Consensus 156 ~~----~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~ 225 (323)
.. ....+..|...|.+++|+|++++|++++.| .|++||++... ...+.. |...|.+++|+|++++|++++
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~ 165 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGC 165 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEe
Confidence 43 466778899999999999999999999996 99999987543 445555 899999999999999999999
Q ss_pred cCc-EEEEEcCC------------------CceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-
Q psy11524 226 ANV-IHIFDISS------------------SSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS- 285 (323)
Q Consensus 226 ~d~-i~iwd~~~------------------~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~- 285 (323)
.|+ |++||++. ++++.. + .|...|.+++|+|++ ..+++++.++.+++|++...
T Consensus 166 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~~~~sp~~----~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 166 ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAE--Y-PSGGWVHAVGFSPSG----NALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEEC--C-CCSSSEEEEEECTTS----SCEEEEETTTEEC-CEECSTT
T ss_pred CCCEEEEEEEEecccCCCccccccccccchhhhhhc--c-cCCceEEEEEECCCC----CEEEEEeCCCcEEEEECCCCC
Confidence 999 99999853 344444 4 889999999999998 89999999999999998764
Q ss_pred -------cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 286 -------LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 286 -------~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
....|...|.+++|+|+|++|++++.|+.+ +|+.
T Consensus 239 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 239 QPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp SCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred CcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 234577899999999999999999877766 6654
No 65
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.4e-34 Score=244.66 Aligned_cols=267 Identities=12% Similarity=0.097 Sum_probs=209.5
Q ss_pred eeEeeEeccCCcceeeeeecc---ccc-cccceeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEe
Q psy11524 46 TVINYPISPYISVLHSYAASH---SWP-QALSLCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKW 118 (323)
Q Consensus 46 ~v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~ 118 (323)
.+....++|++..++....++ .|+ .+.+....+ .|...|++++|+|++++|++++.+ +.|++|+.... ...+
T Consensus 99 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d-~~i~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQD-MQLKIWSVKDGSNPRTL 177 (420)
T ss_dssp EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETT-SEEEEEETTTCCCCEEE
T ss_pred ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCC-CeEEEEeCCCCcCceEE
Confidence 344457889996655544443 355 233334444 599999999999999999998877 59999998754 6778
Q ss_pred eccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeec---CC---------------------CceeEEE
Q psy11524 119 QAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLT---HD---------------------HPISSLA 173 (323)
Q Consensus 119 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~---~~---------------------~~v~~~~ 173 (323)
..|...|.+++|+|++++|++++.|+.|+ +||++ ++.+..+.. +. ..+.+++
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~---iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~ 254 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIR---LWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLE 254 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEE---EEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEE---EeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceE
Confidence 89999999999999999999999999999 99996 555555543 33 3444455
Q ss_pred EecCCCEEEEEeCC-eEEEEeCCCC-eee-ecCCCCccEEEEEEcCCCC-EEEEEecCc-EEEEEcCCCce-eeeecCCC
Q psy11524 174 WAPGGDMFAVGSYN-TLRLCDKVGW-SHS-LDKPDTGSVYDLVWSNDAT-QIAGACANV-IHIFDISSSSS-SNVTAPLS 247 (323)
Q Consensus 174 ~~p~~~~l~~~~~~-~i~i~d~~~~-~~~-~~~~~~~~v~~~~~~~~~~-~l~~~~~d~-i~iwd~~~~~~-~~~~~~~~ 247 (323)
|+|++++|++++.+ .|++||++.. ... ....|...+.+++|+|+++ +|++++.|+ |++||+++++. +.. +..
T Consensus 255 ~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~--~~~ 332 (420)
T 3vl1_A 255 FGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGE--FLI 332 (420)
T ss_dssp SSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE--EEE
T ss_pred EcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhh--hhc
Confidence 67899999999996 9999998754 333 4455788999999999998 999999999 99999998754 554 343
Q ss_pred -CccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-------------cCCCCccceeEEEEeeCCC---eeEeee
Q psy11524 248 -HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-------------LDKPDTGSVYDLVWSSDAT---QIAGAC 310 (323)
Q Consensus 248 -~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~s~~g~---~l~s~~ 310 (323)
+...+.++.+ |++ +.+++++.++.+.+|++... ....|...|.+++|+|+++ .|++++
T Consensus 333 ~~~~~v~~~~~-~~~----~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g 407 (420)
T 3vl1_A 333 NEGTPINNVYF-AAG----ALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVG 407 (420)
T ss_dssp STTSCEEEEEE-ETT----EEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEE
T ss_pred cCCCCceEEEe-CCC----CEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEc
Confidence 6778888865 465 78888888999999997652 2334678899999999999 788888
Q ss_pred cCCeEEEEEeecC
Q psy11524 311 ANGSLLLGTIIQR 323 (323)
Q Consensus 311 ~dg~i~~~~l~~~ 323 (323)
.+|.+.+|++.++
T Consensus 408 ~~g~~~~~~~~~~ 420 (420)
T 3vl1_A 408 KNNFCALYNLSNP 420 (420)
T ss_dssp TTTEEEEEESCC-
T ss_pred CCceEEEEeccCC
Confidence 9999999998764
No 66
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.8e-34 Score=237.78 Aligned_cols=259 Identities=9% Similarity=0.022 Sum_probs=211.7
Q ss_pred eecccceeEeeEeccCCcceeeeeecc---cccc-ccc----eeeecCCCCCEEEEEEcCCCC-eEEEEeeCCeEEEEeC
Q psy11524 40 IRRYDGTVINYPISPYISVLHSYAASH---SWPQ-ALS----LCRTLNVSPPVYSAAWSPDSN-KVLLTQAKSLVIKPLS 110 (323)
Q Consensus 40 ~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~-~~~----~~~~~~~~~~v~~~~~sp~~~-~l~~~~~~~~~v~~~~ 110 (323)
..+|.+.|.++.|+|++..++....++ .|+. ..+ ......|...|.+++|+|+++ +|++++.+ +.|++|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~~wd 85 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQ-GEILKVD 85 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETT-SCEEEEC
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCC-CeEEEEE
Confidence 458999999999999996665444433 2542 122 333446899999999999999 89988766 6999999
Q ss_pred C-CCc-eeEeec--cCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCC----------CeeeEeecCCCceeEEEEec
Q psy11524 111 P-NNK-ATKWQA--HDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG----------RQLYSSLTHDHPISSLAWAP 176 (323)
Q Consensus 111 ~-~~~-~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~----------~~~~~~~~~~~~v~~~~~~p 176 (323)
. ... ...+.. |...|.+++|+| +++|++++.|+.|+ +||++. +.+..+. +...+.+++|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~---iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~ 160 (342)
T 1yfq_A 86 LIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIE---VIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNS 160 (342)
T ss_dssp SSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEE---EECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECS
T ss_pred eccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEE---EEcccccccccccccCCeeeEEe-eCCceEEEEecC
Confidence 8 665 667778 999999999999 99999999999999 999853 3344444 888999999999
Q ss_pred CCCEEEEEeCC-eEEEEeCCC-Ce---eeecCCCCccEEEEEEcC-CCCEEEEEecCc-EEEEEcCCC------ceeeee
Q psy11524 177 GGDMFAVGSYN-TLRLCDKVG-WS---HSLDKPDTGSVYDLVWSN-DATQIAGACANV-IHIFDISSS------SSSNVT 243 (323)
Q Consensus 177 ~~~~l~~~~~~-~i~i~d~~~-~~---~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~-i~iwd~~~~------~~~~~~ 243 (323)
++ +++++.+ .|++||++. .. ......+...+.+++|+| +++++++++.|+ |++||++.. +....
T Consensus 161 ~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~- 237 (342)
T 1yfq_A 161 SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA- 237 (342)
T ss_dssp SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE-
T ss_pred Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee-
Confidence 87 8888886 999999876 32 224456788999999999 999999999999 999999876 55555
Q ss_pred cCCCCc---------cceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCC-ccceeEEEEeeCCCeeEee
Q psy11524 244 APLSHS---------HEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPD-TGSVYDLVWSSDATQIAGA 309 (323)
Q Consensus 244 ~~~~~~---------~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~-~~~v~~~~~s~~g~~l~s~ 309 (323)
+..|. ..|.+++|+|++ ..|++++.++.+.+|++... ....| ...|.+++ |++++|+++
T Consensus 238 -~~~~~~~~~~~~~~~~i~~~~~s~~~----~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~ 310 (342)
T 1yfq_A 238 -FRCHRLNLKDTNLAYPVNSIEFSPRH----KFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLA 310 (342)
T ss_dssp -EECCCCCTTCCSSCCCEEEEEECTTT----CCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEE
T ss_pred -eecccccccccccceeEEEEEEcCCC----CEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEE
Confidence 44554 499999999998 88999999999999998765 45566 89999999 999999999
Q ss_pred ecCCe
Q psy11524 310 CANGS 314 (323)
Q Consensus 310 ~~dg~ 314 (323)
+.||.
T Consensus 311 s~Dg~ 315 (342)
T 1yfq_A 311 TSDDT 315 (342)
T ss_dssp EECTH
T ss_pred ecCCc
Confidence 99998
No 67
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.5e-34 Score=247.38 Aligned_cols=265 Identities=15% Similarity=0.177 Sum_probs=202.6
Q ss_pred cccceeEeeEeccCCcceeeeeecc---ccccc-cc-----------eeeec-CCC------------CCEEEEEEcCCC
Q psy11524 42 RYDGTVINYPISPYISVLHSYAASH---SWPQA-LS-----------LCRTL-NVS------------PPVYSAAWSPDS 93 (323)
Q Consensus 42 ~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~-~~-----------~~~~~-~~~------------~~v~~~~~sp~~ 93 (323)
.+.+.|.++.|+|+|..++....++ .|+.. .+ +...+ .|. ..|++++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 4678999999999996555444433 24311 11 12233 366 889999999998
Q ss_pred --CeEEEEeeCCeEEEEeCCCCcee-----------------------------------------E-eeccCCCeEEEE
Q psy11524 94 --NKVLLTQAKSLVIKPLSPNNKAT-----------------------------------------K-WQAHDGLILKVA 129 (323)
Q Consensus 94 --~~l~~~~~~~~~v~~~~~~~~~~-----------------------------------------~-~~~~~~~v~~~~ 129 (323)
..|++++.+ +.|++|+...... . ..+|...|.+++
T Consensus 106 ~~~~l~s~s~d-~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 106 NAAQFLLSTND-KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp SSSEEEEEECS-SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CcceEEEeCCC-CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 788888776 6999999764211 2 357999999999
Q ss_pred ECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeE--------eecCCCceeEEEEecCC-CEEEEEeCC-eEEEEeCCCCe
Q psy11524 130 WCSSTDLILSGGEDCKYKASFVWDTD-GRQLYS--------SLTHDHPISSLAWAPGG-DMFAVGSYN-TLRLCDKVGWS 198 (323)
Q Consensus 130 ~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~--------~~~~~~~v~~~~~~p~~-~~l~~~~~~-~i~i~d~~~~~ 198 (323)
|+|++++|+++ .|+.|+ +||++ ...... +..|...|.+++|+|++ ++|++++.| .|++||++...
T Consensus 185 ~~~~~~~l~s~-~d~~i~---iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRIN---LWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp ECTTSSEEEEE-CSSEEE---EEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EcCCCCEEEEe-CCCeEE---EEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 99999999998 799999 99997 333322 45788999999999998 999999996 99999987543
Q ss_pred -----eeecCCCCc------------cEEEEEEcCCCCEEEEEecCc-EEEEEcCC-CceeeeecCCCCccc--------
Q psy11524 199 -----HSLDKPDTG------------SVYDLVWSNDATQIAGACANV-IHIFDISS-SSSSNVTAPLSHSHE-------- 251 (323)
Q Consensus 199 -----~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~-~~~~~~~~~~~~~~~-------- 251 (323)
...+..|.. .|.+++|+|+|++|++++. + |++||+++ ++++.. +..|...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~--~~~~~~~~~~l~~~~ 337 (447)
T 3dw8_B 261 LCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVET--YQVHEYLRSKLCSLY 337 (447)
T ss_dssp SSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCC--EESCGGGTTTHHHHH
T ss_pred cccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccce--eeccccccccccccc
Confidence 456666665 8999999999999999999 9 99999997 777776 4555432
Q ss_pred -------eEEEEEccCCCCccceEEEEeCCCCeEEEecccc---cC---------------------------------C
Q psy11524 252 -------ITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS---LD---------------------------------K 288 (323)
Q Consensus 252 -------v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~---~~---------------------------------~ 288 (323)
+..++|+|++ ..|++++.++.+++|++... .. .
T Consensus 338 ~~~~i~~~~~~~~s~~~----~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (447)
T 3dw8_B 338 ENDCIFDKFECCWNGSD----SVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSL 413 (447)
T ss_dssp HTSGGGCCCCEEECTTS----SEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGC
T ss_pred cccccccceEEEECCCC----CEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCccccccccccc
Confidence 3349999998 77888888888888887653 00 0
Q ss_pred CCccceeEEEEeeCCCeeEeeecCCeEEEEE
Q psy11524 289 PDTGSVYDLVWSSDATQIAGACANGSLLLGT 319 (323)
Q Consensus 289 ~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~ 319 (323)
.+...|..++|+|++++||+++.++ +++|.
T Consensus 414 ~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 414 DFNKKILHTAWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp CTTSCCCEEEECSSSSEEEEECSSC-EEEEE
T ss_pred ccCCceeEEEECCCCCEEEEEecce-eeeec
Confidence 1245688999999999999998887 66664
No 68
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.7e-33 Score=255.10 Aligned_cols=231 Identities=16% Similarity=0.189 Sum_probs=199.3
Q ss_pred CCCCCEEEEEEcCCC-CeEEEEeeCCeEEEEeCCCCc-------eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeee
Q psy11524 79 NVSPPVYSAAWSPDS-NKVLLTQAKSLVIKPLSPNNK-------ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASF 150 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~-~~l~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~ 150 (323)
.|.+.|++++|+|++ ++|++++.| +.|++|+.... ...+.+|...|.+++|+|++++|++++.|++|+
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D-~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~--- 455 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRD-KSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR--- 455 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETT-SEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE---
T ss_pred cCCceeEEEEecCCCCCEEEEEeCC-CcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE---
Confidence 499999999999976 577777666 69999987642 356789999999999999999999999999999
Q ss_pred EEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeee----cCCCCccEEEEEEcCCC--CEEE
Q psy11524 151 VWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSL----DKPDTGSVYDLVWSNDA--TQIA 222 (323)
Q Consensus 151 v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~----~~~~~~~v~~~~~~~~~--~~l~ 222 (323)
+||+. +.....+.+|...|.+++|+|++++|++++.| +|++||..+..... ..+|...|.+++|+|++ ..|+
T Consensus 456 vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 535 (694)
T 3dm0_A 456 LWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIV 535 (694)
T ss_dssp EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEE
T ss_pred EEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEE
Confidence 99995 66778889999999999999999999999997 99999987654332 24588899999999986 5899
Q ss_pred EEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEE
Q psy11524 223 GACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDL 297 (323)
Q Consensus 223 ~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~ 297 (323)
+++.|+ |++||+++++.... +.+|...|++++|+|++ ..+++++.++.+++|++... ... +...|.++
T Consensus 536 s~s~d~~v~vwd~~~~~~~~~--~~~h~~~v~~v~~spdg----~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~ 608 (694)
T 3dm0_A 536 SASWDKTVKVWNLSNCKLRST--LAGHTGYVSTVAVSPDG----SLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVIHAL 608 (694)
T ss_dssp EEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTS----SEEEEEETTSBCEEEETTTTEEEECCB-CSSCEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEE--EcCCCCCEEEEEEeCCC----CEEEEEeCCCeEEEEECCCCceEEEec-CCCcEEEE
Confidence 999999 99999999998887 78999999999999999 89999999999999998765 222 35679999
Q ss_pred EEeeCCCeeEeeecCCeEEEEEee
Q psy11524 298 VWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 298 ~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
+|+|++.+|++++ |+.|++|++.
T Consensus 609 ~~sp~~~~l~~~~-~~~i~iwd~~ 631 (694)
T 3dm0_A 609 CFSPNRYWLCAAT-EHGIKIWDLE 631 (694)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETT
T ss_pred EEcCCCcEEEEEc-CCCEEEEECC
Confidence 9999998777765 5669999974
No 69
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.2e-33 Score=240.64 Aligned_cols=235 Identities=12% Similarity=0.067 Sum_probs=196.9
Q ss_pred eeeec-CCCCCEEEEEEcCCC-CeEEEEeeCCeEEEEeCCCCc--eeEe--eccCCCeEEEEECC-CCCEEEEEcCCCce
Q psy11524 74 LCRTL-NVSPPVYSAAWSPDS-NKVLLTQAKSLVIKPLSPNNK--ATKW--QAHDGLILKVAWCS-STDLILSGGEDCKY 146 (323)
Q Consensus 74 ~~~~~-~~~~~v~~~~~sp~~-~~l~~~~~~~~~v~~~~~~~~--~~~~--~~~~~~v~~~~~~~-~~~~l~~~~~d~~i 146 (323)
+.+.+ .|...|++++|+|++ ++|++++.+ +.|++|+.... ...+ .+|...|.+++|+| ++++|++++.|+.|
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i 143 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKG-GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT 143 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBT-SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCC-CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE
Confidence 33444 489999999999999 889888777 69999998765 3333 36999999999999 78999999999999
Q ss_pred EeeeEEeCCCCeeeEeecCC---CceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCC-EE
Q psy11524 147 KASFVWDTDGRQLYSSLTHD---HPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDAT-QI 221 (323)
Q Consensus 147 ~~i~v~d~~~~~~~~~~~~~---~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 221 (323)
+ +||++++....+..+. ..|.+++|+|++++|++++.+ .|++||+++.....+..|...|.+++|+|+++ +|
T Consensus 144 ~---iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 220 (383)
T 3ei3_B 144 T---LRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLM 220 (383)
T ss_dssp E---EEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEE
T ss_pred E---EEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEE
Confidence 9 9999987777776544 789999999999999999996 99999998878888888999999999999999 89
Q ss_pred EEEecCc-EEEEEcCC----CceeeeecCCCCccceEEEEEcc-CCCCccceEEEEeCCCCeEEEeccccc----CC---
Q psy11524 222 AGACANV-IHIFDISS----SSSSNVTAPLSHSHEITQLAVNQ-TGSLQERHVAFIDKNRDLYLSMWSHSL----DK--- 288 (323)
Q Consensus 222 ~~~~~d~-i~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~p-~g~~~d~~l~~~~~~~~~~~~~~~~~~----~~--- 288 (323)
++++.|+ |++||+++ +..+.. .+|...|.+++|+| ++ ..+++.+.++.+.+|++.... ..
T Consensus 221 ~s~~~d~~i~iwd~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~----~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 293 (383)
T 3ei3_B 221 ATSSVDATVKLWDLRNIKDKNSYIAE---MPHEKPVNAAYFNPTDS----TKLLTTDQRNEIRVYSSYDWSKPDQIIIHP 293 (383)
T ss_dssp EEEETTSEEEEEEGGGCCSTTCEEEE---EECSSCEEEEEECTTTS----CEEEEEESSSEEEEEETTBTTSCSEEEECC
T ss_pred EEEeCCCEEEEEeCCCCCcccceEEE---ecCCCceEEEEEcCCCC----CEEEEEcCCCcEEEEECCCCcccccccccc
Confidence 9999999 99999997 555555 36889999999999 88 889999999999999987640 11
Q ss_pred ----CCc----------cceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 289 ----PDT----------GSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 289 ----~~~----------~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
.|. ..+..++|+|+|++ +++.||.|++|++.
T Consensus 294 ~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~ 338 (383)
T 3ei3_B 294 HRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDAN 338 (383)
T ss_dssp BCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETT
T ss_pred ccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecC
Confidence 111 34455777788776 88899999999974
No 70
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.6e-34 Score=244.35 Aligned_cols=249 Identities=12% Similarity=0.063 Sum_probs=195.4
Q ss_pred eEeecccceeEeeEeccCCcceeeeeeccc---cccccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc
Q psy11524 38 LTIRRYDGTVINYPISPYISVLHSYAASHS---WPQALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK 114 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~ 114 (323)
..+++|...|.+++|+|+| ..+. |+........+.|...|.+++|||+|++||+++.+ |.+++|+..+.
T Consensus 46 ~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~d-g~V~iwd~~~~ 117 (588)
T 2j04_A 46 KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNN-GNVSVFKDNKM 117 (588)
T ss_dssp SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETT-SCEEEEETTEE
T ss_pred ceecCCCccEEEEEECCCC-------CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCC-CcEEEEeCCce
Confidence 3457999999999999999 2333 33443344455678999999999999999999877 59999997665
Q ss_pred eeEeeccCC-----CeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCe--------eeEe----ecCCCceeEEEEecC
Q psy11524 115 ATKWQAHDG-----LILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQ--------LYSS----LTHDHPISSLAWAPG 177 (323)
Q Consensus 115 ~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~--------~~~~----~~~~~~v~~~~~~p~ 177 (323)
...+. |.. .+.+++|||||++||+|+.||+|+ +||+.++. +..+ .+|...|.+++|+||
T Consensus 118 l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk---IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd 193 (588)
T 2j04_A 118 LTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ---FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED 193 (588)
T ss_dssp EEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE---EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT
T ss_pred eeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE---EEECCCCccccccceeeeeeecccccccccEEEEEEcCC
Confidence 55556 665 499999999999999999999999 99997553 4555 556789999999999
Q ss_pred CCEEEEEeCC-eEEEEeCCCCee----eec-CCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCcc
Q psy11524 178 GDMFAVGSYN-TLRLCDKVGWSH----SLD-KPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSH 250 (323)
Q Consensus 178 ~~~l~~~~~~-~i~i~d~~~~~~----~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~ 250 (323)
| +++++.| .+++||+.+... ..+ .+|...|.+++|+ |++|++++ ++ |++||+.+++.... ..+|..
T Consensus 194 g--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~--~~gh~~ 266 (588)
T 2j04_A 194 V--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSL--KTGSLE 266 (588)
T ss_dssp E--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEE--ECSCCS
T ss_pred c--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEE--EcCCCc
Confidence 9 6666766 999999986543 233 4688899999999 68899887 58 99999998877443 347999
Q ss_pred ceEEEEE--ccCCCCccceEEEEeCCCCeEEEecccc---------------------------cCCCCccceeEEEEee
Q psy11524 251 EITQLAV--NQTGSLQERHVAFIDKNRDLYLSMWSHS---------------------------LDKPDTGSVYDLVWSS 301 (323)
Q Consensus 251 ~v~~~~~--~p~g~~~d~~l~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~v~~~~~s~ 301 (323)
.+..++| +|++ ..+++.+.+|. ++|..... .... ...|.+++|||
T Consensus 267 ~V~~va~~~s~d~----~~La~a~edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~~-~~~I~~va~SP 340 (588)
T 2j04_A 267 NFHIIPLNHEKES----TILLMSNKTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYET-TLVIHGISLSP 340 (588)
T ss_dssp CCCEEEETTCSSC----EEEEECSSCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSCC-EEEEEEEEECT
T ss_pred eEEEEEeeeCCCC----CEEEEEcCCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeecc-ceEEEEEEECC
Confidence 9999999 9998 67777777776 66664211 1112 45699999999
Q ss_pred CCCeeEeeec
Q psy11524 302 DATQIAGACA 311 (323)
Q Consensus 302 ~g~~l~s~~~ 311 (323)
||+.+|+++.
T Consensus 341 dG~~lA~~~~ 350 (588)
T 2j04_A 341 DGYSIAIVYD 350 (588)
T ss_dssp TSSEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 9999998864
No 71
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.3e-34 Score=236.45 Aligned_cols=253 Identities=16% Similarity=0.198 Sum_probs=189.6
Q ss_pred eEeecccceeEeeEeccCCcceeeeeecccccccccee----------eec-CCCCCEEEEEEcC--CCCeEEEEeeCCe
Q psy11524 38 LTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLC----------RTL-NVSPPVYSAAWSP--DSNKVLLTQAKSL 104 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~v~~~~~sp--~~~~l~~~~~~~~ 104 (323)
..+.+|.+.|.+++|+|+|+. +++++.|++.++| ..+ .|...|.+++|+| ++++|++++.| +
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~----lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-~ 81 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTR----LATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-R 81 (316)
T ss_dssp -------CCEEEEEECGGGCE----EEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-S
T ss_pred eecccccCeEEEeeEcCCCCE----EEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-C
Confidence 346799999999999999954 4555545444443 223 4899999999986 48899998877 5
Q ss_pred EEEEeCCCCc----eeEeeccCCCeEEEEECCC--CCEEEEEcCCCceEeeeEEeCCCC-e---eeEeecCCCceeEEEE
Q psy11524 105 VIKPLSPNNK----ATKWQAHDGLILKVAWCSS--TDLILSGGEDCKYKASFVWDTDGR-Q---LYSSLTHDHPISSLAW 174 (323)
Q Consensus 105 ~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~i~v~d~~~~-~---~~~~~~~~~~v~~~~~ 174 (323)
.|++||.... ...+.+|...|.+++|+|+ +.+|++++.|++|+ +||++.. . ...+..|...+.+++|
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~---lwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS---LLTYTGEGQWEVKKINNAHTIGCNAVSW 158 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE---EEEECSSSCEEECCBTTSSSSCBCCCEE
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE---EEecCCCCCcceeeeeccccCCcceEEE
Confidence 9999998753 4456789999999999998 78999999999999 9999643 1 3445678889999999
Q ss_pred ecC-----------------CCEEEEEeCC-eEEEEeCCCC----eeeecCCCCccEEEEEEcCCC----CEEEEEecCc
Q psy11524 175 APG-----------------GDMFAVGSYN-TLRLCDKVGW----SHSLDKPDTGSVYDLVWSNDA----TQIAGACANV 228 (323)
Q Consensus 175 ~p~-----------------~~~l~~~~~~-~i~i~d~~~~----~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~ 228 (323)
+|+ +++|++++.| .|++||++.. ....+.+|...|.+++|+|++ ++|++++.|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 159 APAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred ccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCC
Confidence 997 4689999987 9999998642 445677899999999999986 7899999999
Q ss_pred -EEEEEcCCCc----eeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccccCCCCccceeEEEEeeCC
Q psy11524 229 -IHIFDISSSS----SSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSLDKPDTGSVYDLVWSSDA 303 (323)
Q Consensus 229 -i~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g 303 (323)
|++||+++.. .... +..|...|.+++|+|++ ..|+++..++.+++|+... .+...++.--.++
T Consensus 239 ~v~iw~~~~~~~~~~~~~~--~~~~~~~v~~v~~sp~g----~~las~~~D~~v~lw~~~~------~g~~~~~~~~~~~ 306 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPKL--LHKFNDVVWHVSWSITA----NILAVSGGDNKVTLWKESV------DGQWVCISDVNKG 306 (316)
T ss_dssp EEEEEECSSTTCCCCBCCE--EEECSSCEEEEEECTTT----CCEEEEESSSCEEEEEECT------TSCEEEEEECC--
T ss_pred eEEEEEccCccccchhhhh--hhcCCCcEEEEEEcCCC----CEEEEEcCCCeEEEEEECC------CCcEEEeeeccCC
Confidence 9999987631 1122 34578899999999999 8999999999999999864 3444555555555
Q ss_pred CeeEeee
Q psy11524 304 TQIAGAC 310 (323)
Q Consensus 304 ~~l~s~~ 310 (323)
+..++++
T Consensus 307 ~~~~~~~ 313 (316)
T 3bg1_A 307 QGSVSAS 313 (316)
T ss_dssp -------
T ss_pred CCceeee
Confidence 5555443
No 72
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=245.60 Aligned_cols=234 Identities=11% Similarity=0.117 Sum_probs=190.5
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-------------eeEeeccC------------CCeEEEEECC
Q psy11524 78 LNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-------------ATKWQAHD------------GLILKVAWCS 132 (323)
Q Consensus 78 ~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-------------~~~~~~~~------------~~v~~~~~~~ 132 (323)
+.+.+.|++++|+|+|++||+|+.+ +.|++|+.... ...+.+|. ..|.+++|+|
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~d-g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKG-GRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETT-SEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCC-CeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 4578999999999999999998777 69999987642 44677898 8899999999
Q ss_pred CC--CEEEEEcCCCceEeeeEEeCCCCee----------------------------------------eE-eecCCCce
Q psy11524 133 ST--DLILSGGEDCKYKASFVWDTDGRQL----------------------------------------YS-SLTHDHPI 169 (323)
Q Consensus 133 ~~--~~l~~~~~d~~i~~i~v~d~~~~~~----------------------------------------~~-~~~~~~~v 169 (323)
++ .+|++++.|+.|+ +||+..... .. ..+|...|
T Consensus 104 ~~~~~~l~s~s~d~~i~---iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 180 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIK---LWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHI 180 (447)
T ss_dssp CCSSSEEEEEECSSCEE---EEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCC
T ss_pred CCCcceEEEeCCCCeEE---EEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcce
Confidence 98 7999999999999 999853221 12 35688999
Q ss_pred eEEEEecCCCEEEEEeCCeEEEEeCC-CC-eee-------ecCCCCccEEEEEEcCCC-CEEEEEecCc-EEEEEcCCCc
Q psy11524 170 SSLAWAPGGDMFAVGSYNTLRLCDKV-GW-SHS-------LDKPDTGSVYDLVWSNDA-TQIAGACANV-IHIFDISSSS 238 (323)
Q Consensus 170 ~~~~~~p~~~~l~~~~~~~i~i~d~~-~~-~~~-------~~~~~~~~v~~~~~~~~~-~~l~~~~~d~-i~iwd~~~~~ 238 (323)
.+++|+|++++|+++.++.|++||++ .. ... .+..|...|.+++|+|++ ++|++++.|+ |++||+++++
T Consensus 181 ~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 260 (447)
T 3dw8_B 181 NSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASA 260 (447)
T ss_dssp CEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCS
T ss_pred EEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCc
Confidence 99999999999999833499999988 32 222 245788999999999998 9999999999 9999999988
Q ss_pred e----eeeecCCCCcc------------ceEEEEEccCCCCccceEEEEeCCCCeEEEeccc-c----cCCCCccc----
Q psy11524 239 S----SNVTAPLSHSH------------EITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSH-S----LDKPDTGS---- 293 (323)
Q Consensus 239 ~----~~~~~~~~~~~------------~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~-~----~~~~~~~~---- 293 (323)
. +.. +..|.. .|.+++|+|++ ..+++++. +.+.+|++.. . ....|...
T Consensus 261 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~s~~g----~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l 333 (447)
T 3dw8_B 261 LCDRHSKL--FEEPEDPSNRSFFSEIISSISDVKFSHSG----RYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKL 333 (447)
T ss_dssp SSCTTCEE--ECCC-----CCHHHHHTTCEEEEEECTTS----SEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTH
T ss_pred cccceeeE--eccCCCccccccccccCceEEEEEECCCC----CEEEEeeC-CeEEEEeCCCCccccceeeccccccccc
Confidence 6 555 566665 89999999998 78888888 9999999875 2 23334321
Q ss_pred -----------eeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 294 -----------VYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 294 -----------v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
+..++|+|++++|++++.||.|++|++..
T Consensus 334 ~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 334 CSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp HHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTT
T ss_pred cccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCC
Confidence 33499999999999999999999999753
No 73
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.7e-33 Score=241.12 Aligned_cols=241 Identities=15% Similarity=0.214 Sum_probs=202.1
Q ss_pred ceeeecCCCCCEEEEEEcCC-CCeEEEEeeCCeEEEEeCCCC------------ceeEeeccCCCeEEEEECCCCC-EEE
Q psy11524 73 SLCRTLNVSPPVYSAAWSPD-SNKVLLTQAKSLVIKPLSPNN------------KATKWQAHDGLILKVAWCSSTD-LIL 138 (323)
Q Consensus 73 ~~~~~~~~~~~v~~~~~sp~-~~~l~~~~~~~~~v~~~~~~~------------~~~~~~~~~~~v~~~~~~~~~~-~l~ 138 (323)
+..+.+.|.+.|++++|+|+ +.+|++++.+ +.|++|+... ....+..|...|.+++|+|++. +|+
T Consensus 120 ~~~~~~~h~~~v~~l~~~p~~~~~lat~~~d-g~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~ 198 (430)
T 2xyi_A 120 EIEIKINHEGEVNRARYMPQNACVIATKTPS-SDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLL 198 (430)
T ss_dssp EEEEEEEESSCCSEEEEETTEEEEEEEECSS-SCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEE
T ss_pred EEEEEEcCCCcEEEEEECCCCCcEEEEECCC-CcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEE
Confidence 34455679999999999998 5666666555 6999998764 2567789999999999999988 999
Q ss_pred EEcCCCceEeeeEEeCCC-Ce-------eeEeecCCCceeEEEEec-CCCEEEEEeCC-eEEEEeCCCC----eeeecCC
Q psy11524 139 SGGEDCKYKASFVWDTDG-RQ-------LYSSLTHDHPISSLAWAP-GGDMFAVGSYN-TLRLCDKVGW----SHSLDKP 204 (323)
Q Consensus 139 ~~~~d~~i~~i~v~d~~~-~~-------~~~~~~~~~~v~~~~~~p-~~~~l~~~~~~-~i~i~d~~~~----~~~~~~~ 204 (323)
+++.||.|+ +|++.. .. ...+..|...|.+++|+| ++.+|++++.+ .|++||++.. .......
T Consensus 199 s~~~dg~i~---vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 199 SASDDHTIC---LWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp EECTTSCEE---EEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred EEeCCCeEE---EEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 999999999 999964 11 345668899999999999 67888899885 9999998743 3445567
Q ss_pred CCccEEEEEEcCCCC-EEEEEecCc-EEEEEcCC-CceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEe
Q psy11524 205 DTGSVYDLVWSNDAT-QIAGACANV-IHIFDISS-SSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSM 281 (323)
Q Consensus 205 ~~~~v~~~~~~~~~~-~l~~~~~d~-i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~ 281 (323)
|...|++++|+|+++ +|++++.|+ |++||+++ ++++.. +..|...|.+++|+|+++ ..+++++.++.+.+|+
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~--~~~h~~~v~~i~~sp~~~---~~l~s~~~d~~i~iwd 350 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS--FESHKDEIFQVQWSPHNE---TILASSGTDRRLHVWD 350 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEE--EECCSSCEEEEEECSSCT---TEEEEEETTSCCEEEE
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEE--eecCCCCEEEEEECCCCC---CEEEEEeCCCcEEEEe
Confidence 899999999999887 688999999 99999998 456666 677899999999999982 4688899999999999
Q ss_pred ccc---------------c---cCCCCccceeEEEEeeCCC-eeEeeecCCeEEEEEeec
Q psy11524 282 WSH---------------S---LDKPDTGSVYDLVWSSDAT-QIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 282 ~~~---------------~---~~~~~~~~v~~~~~s~~g~-~l~s~~~dg~i~~~~l~~ 322 (323)
+.. . ....|...|.+++|+|+++ +|++++.||.|++|++.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 351 LSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp GGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 876 1 4456788999999999999 899999999999999853
No 74
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-34 Score=246.35 Aligned_cols=249 Identities=11% Similarity=0.029 Sum_probs=197.1
Q ss_pred cccceeEeeEeccCCcceeeeeeccccccccce---eeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCce-e
Q psy11524 42 RYDGTVINYPISPYISVLHSYAASHSWPQALSL---CRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKA-T 116 (323)
Q Consensus 42 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~-~ 116 (323)
.-...|.+++|+||| ..+++++.|.+.+- .+.+ .|...|.+++|+|+| .+ +.+.+|+..+.. .
T Consensus 13 ~~~~~v~sv~~SpDG----~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg-------~~-~~~~~~~~~~~~~~ 80 (588)
T 2j04_A 13 EFEDWKNNLTWARDG----TLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLE-------FE-NKLDFELAQQNGLL 80 (588)
T ss_dssp CCSSSSCCEEECTTS----CEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCC-------CC-CTTTTSCCCSSCSS
T ss_pred HhhccEEEEEECCCC----CEEEEEcCCceeecccccceecCCCccEEEEEECCCC-------Cc-ceEEEEeCCCceEe
Confidence 345789999999999 67777777766642 2222 388999999999999 22 355555544332 2
Q ss_pred EeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCC-----ceeEEEEecCCCEEEEEeCC-eEE
Q psy11524 117 KWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDH-----PISSLAWAPGGDMFAVGSYN-TLR 190 (323)
Q Consensus 117 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~-----~v~~~~~~p~~~~l~~~~~~-~i~ 190 (323)
.+ .|...|.+++|+|||++||+++.||.|+ +||.++ .+..+. |.. .+.+++|||||++|++|+.| +|+
T Consensus 81 ~~-~~~~~V~~vawSPdG~~LAs~s~dg~V~---iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVk 154 (588)
T 2j04_A 81 NS-QPVCYPRVCKPSPIDDWMAVLSNNGNVS---VFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQ 154 (588)
T ss_dssp TT-SCSCCEEEEEECSSSSCEEEEETTSCEE---EEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEE
T ss_pred ec-CCCCcEEEEEECCCCCEEEEEeCCCcEE---EEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEE
Confidence 22 4588999999999999999999999999 999765 555556 554 49999999999999999996 999
Q ss_pred EEeCCCCe--------eeec----CCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCcee---eeecC-CCCccceE
Q psy11524 191 LCDKVGWS--------HSLD----KPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSS---NVTAP-LSHSHEIT 253 (323)
Q Consensus 191 i~d~~~~~--------~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~---~~~~~-~~~~~~v~ 253 (323)
+||+.+.. +..+ .+|..+|.+++|+|+| +++++.|+ +++||+.+++.. .+ + ..|...|.
T Consensus 155 IWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~t--L~~~h~~~V~ 230 (588)
T 2j04_A 155 FFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRM--IQNASRRKIT 230 (588)
T ss_dssp EEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEE--EECCCSSCCC
T ss_pred EEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceee--ecccccCcEE
Confidence 99988653 2343 6688899999999999 88888899 999999887743 23 3 46778999
Q ss_pred EEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEE--eeCCCeeEeeecCCeEEEEEe
Q psy11524 254 QLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVW--SSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 254 ~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~--s~~g~~l~s~~~dg~i~~~~l 320 (323)
+++|+ + +.+++.. ++.+++|++... ...+|...|..++| +||+..|++++.||+ ++|.+
T Consensus 231 svaFs--g----~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 231 DLKIV--D----YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp CEEEE--T----TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred EEEEE--C----CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 99999 4 5676665 577888887764 22268999999999 999999999999999 99975
No 75
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=245.02 Aligned_cols=263 Identities=12% Similarity=0.049 Sum_probs=202.5
Q ss_pred EeccCCcceeeeeeccccccccceeeec-C-CCCCEEEEEEcC-CCCeEEEEeeCCeEEEEeCCCC---c----eeEeec
Q psy11524 51 PISPYISVLHSYAASHSWPQALSLCRTL-N-VSPPVYSAAWSP-DSNKVLLTQAKSLVIKPLSPNN---K----ATKWQA 120 (323)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~sp-~~~~l~~~~~~~~~v~~~~~~~---~----~~~~~~ 120 (323)
.|+|++..++. ...|+.+.++...+ . |.+.|++++|+| ++++|++++.+ +.|++|+... . ......
T Consensus 34 ~f~~~~~~~~~---~~~w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~d-g~v~vwd~~~~~~~~~~~~~~~~~ 109 (437)
T 3gre_A 34 EFGPIQEIVRS---PNMGNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQ-GVIKIWNLKEIIVGEVYSSSLTYD 109 (437)
T ss_dssp GGCCCCCCCCC---CCGGGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETT-SEEEEEEHHHHHTTCCCSCSEEEE
T ss_pred hcCCccccccc---cccccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCC-ceEEEeECcccccCcccceeeecc
Confidence 46777754432 22588888888777 4 789999999999 99999999877 6999999754 2 122225
Q ss_pred cCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC----CCeeeEeec------------CCCceeEEE--EecCCCEEE
Q psy11524 121 HDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD----GRQLYSSLT------------HDHPISSLA--WAPGGDMFA 182 (323)
Q Consensus 121 ~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~----~~~~~~~~~------------~~~~v~~~~--~~p~~~~l~ 182 (323)
|...|.+++|+|++++|++++.||.|+ +||++ ++....... +...+.++. ++|++.+++
T Consensus 110 h~~~v~~~~~~~~~~~l~s~s~dg~i~---vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (437)
T 3gre_A 110 CSSTVTQITMIPNFDAFAVSSKDGQII---VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLV 186 (437)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEE---EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCEEE---EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEE
Confidence 999999999999999999999999999 99983 433332221 345566666 557899999
Q ss_pred EEeCC-eEEEEeCCCC-eeeecCC--CCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEE
Q psy11524 183 VGSYN-TLRLCDKVGW-SHSLDKP--DTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAV 257 (323)
Q Consensus 183 ~~~~~-~i~i~d~~~~-~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 257 (323)
+++.+ .|++||++.. ....+.. |...|.+++|+|++++|++++.|+ |++||+++++++..+. ..|..+|.+++|
T Consensus 187 ~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~ 265 (437)
T 3gre_A 187 ALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS-FGDHAPITHVEV 265 (437)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB-CTTCEEEEEEEE
T ss_pred EEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe-cCCCCceEEEEe
Confidence 99996 9999998754 5555555 788999999999999999999999 9999999999888731 267779999977
Q ss_pred ccCCCCccceEEEEeCCCCeEEEecccc----------------------------cCCC--CccceeEEEEeeCCCeeE
Q psy11524 258 NQTGSLQERHVAFIDKNRDLYLSMWSHS----------------------------LDKP--DTGSVYDLVWSSDATQIA 307 (323)
Q Consensus 258 ~p~g~~~d~~l~~~~~~~~~~~~~~~~~----------------------------~~~~--~~~~v~~~~~s~~g~~l~ 307 (323)
+|.-......+++++.++.+.+|++... .... |...|.+++|+ ++++|+
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~ 344 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILL 344 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEE
Confidence 6642111156666777777777776532 0112 67889999999 889999
Q ss_pred eeecCCeEEEEEeec
Q psy11524 308 GACANGSLLLGTIIQ 322 (323)
Q Consensus 308 s~~~dg~i~~~~l~~ 322 (323)
+++.||.|++|++.+
T Consensus 345 s~~~d~~i~~wd~~~ 359 (437)
T 3gre_A 345 TDEATSSIVMFSLNE 359 (437)
T ss_dssp EEGGGTEEEEEETTC
T ss_pred ecCCCCeEEEEECCC
Confidence 999999999999743
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.9e-33 Score=237.79 Aligned_cols=239 Identities=15% Similarity=0.213 Sum_probs=201.2
Q ss_pred cceeeecCCCCCEEEEEEcCCCC-eEEEEeeCCeEEEEeCC----CCce--------eEeec----------cCCCeEEE
Q psy11524 72 LSLCRTLNVSPPVYSAAWSPDSN-KVLLTQAKSLVIKPLSP----NNKA--------TKWQA----------HDGLILKV 128 (323)
Q Consensus 72 ~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~~~~~v~~~~~----~~~~--------~~~~~----------~~~~v~~~ 128 (323)
.+......|...|++++|+|+++ +|++++.+ +.|++|+. .... ..+.. |...|.++
T Consensus 36 ~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (425)
T 1r5m_A 36 VKILKEIVKLDNIVSSTWNPLDESILAYGEKN-SVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCL 114 (425)
T ss_dssp CEECEEEEECSCCSEEEECSSCTTEEEEEETB-TEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEE
T ss_pred hhheeeeeccCceEEEEECCCCCcEEEEecCC-ceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEE
Confidence 33444455789999999999999 99988766 69999998 5432 22222 57799999
Q ss_pred EECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCee--------
Q psy11524 129 AWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSH-------- 199 (323)
Q Consensus 129 ~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~-------- 199 (323)
+|+|++++|++++.||.|+ +||.+++....+..|...|.+++|+|++++|++++.+ .|++||+.....
T Consensus 115 ~~s~~~~~l~~~~~dg~i~---i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 191 (425)
T 1r5m_A 115 AWSHDGNSIVTGVENGELR---LWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKE 191 (425)
T ss_dssp EECTTSSEEEEEETTSCEE---EEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-
T ss_pred EEcCCCCEEEEEeCCCeEE---EEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccc
Confidence 9999999999999999999 9998889999999999999999999999999999986 999999864321
Q ss_pred -------------------------------------------------eecCCCCccEEEEEEcCCCCEEEEEecCc-E
Q psy11524 200 -------------------------------------------------SLDKPDTGSVYDLVWSNDATQIAGACANV-I 229 (323)
Q Consensus 200 -------------------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i 229 (323)
..+..|...+.+++|+|++++|++++.|+ |
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i 271 (425)
T 1r5m_A 192 TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTL 271 (425)
T ss_dssp --------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred cCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEE
Confidence 12235677899999999999999999999 9
Q ss_pred EEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCe
Q psy11524 230 HIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQ 305 (323)
Q Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~ 305 (323)
++||+++++.+.. +..|...+.+++|+|++ .++++..++.+.+|++... ....|...|.+++|+|++++
T Consensus 272 ~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~-----~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 344 (425)
T 1r5m_A 272 RIWHGGNGNSQNC--FYGHSQSIVSASWVGDD-----KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQK 344 (425)
T ss_dssp EEECSSSBSCSEE--ECCCSSCEEEEEEETTT-----EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSE
T ss_pred EEEECCCCccceE--ecCCCccEEEEEECCCC-----EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCE
Confidence 9999999988887 67889999999999984 7778888888888888664 34457889999999999999
Q ss_pred eEeeecCCeEEEEEee
Q psy11524 306 IAGACANGSLLLGTII 321 (323)
Q Consensus 306 l~s~~~dg~i~~~~l~ 321 (323)
|++++.||.|++|++.
T Consensus 345 l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 345 YAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEEEETTSCEEEEECH
T ss_pred EEEEECCCeEEEEECC
Confidence 9999999999999974
No 77
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-32 Score=255.25 Aligned_cols=192 Identities=17% Similarity=0.123 Sum_probs=154.0
Q ss_pred EeecccceeEeeEeccCCcceeeeeecccccccccee--------eecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeC
Q psy11524 39 TIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLC--------RTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLS 110 (323)
Q Consensus 39 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~ 110 (323)
...+|.+.|.+++|+|++..+ ++|+.|++.++| ..+.|...|.+++|+| |++|++++.+ +.|++||
T Consensus 12 ~~~gh~~~V~~lafspdg~~l----Asgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D-~~v~lWd 85 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLL----AIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAK-DTVYVLS 85 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEE----EEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETT-CEEEEEE
T ss_pred cccCCCCCcEEEEECCCCCEE----EEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECc-CeEEEEE
Confidence 345899999999999999544 445444444443 3456888999999999 8889988776 6999999
Q ss_pred CCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeee------------EeecCCCceeEEEEec
Q psy11524 111 PNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLY------------SSLTHDHPISSLAWAP 176 (323)
Q Consensus 111 ~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~------------~~~~~~~~v~~~~~~p 176 (323)
.... +..+ .|.+.|.+++|+|++++|++|+.||.|+ +||+++..+. .+.+|..+|.+++|+|
T Consensus 86 ~~~~~~~~~~-~~~~~V~~v~~sp~g~~l~sgs~dg~V~---lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 86 LYSQKVLTTV-FVPGKITSIDTDASLDWMLIGLQNGSMI---VYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp TTTCSEEEEE-ECSSCEEEEECCTTCSEEEEEETTSCEE---EEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred CCCCcEEEEE-cCCCCEEEEEECCCCCEEEEEcCCCcEE---EEECCCCccccceeccccccccccccCCCCeEEEEEcc
Confidence 8765 4445 3778999999999999999999999999 9999765542 2355788999999999
Q ss_pred C-CCEEEEEeCC-eEEEEeCCCCe-eeecCCC------------------CccEEEEEEcCCCCEEEEEecCc-EEEEEc
Q psy11524 177 G-GDMFAVGSYN-TLRLCDKVGWS-HSLDKPD------------------TGSVYDLVWSNDATQIAGACANV-IHIFDI 234 (323)
Q Consensus 177 ~-~~~l~~~~~~-~i~i~d~~~~~-~~~~~~~------------------~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~ 234 (323)
+ +..+++++.+ .| +||++... ...+..| ...|.+++|+|+|++|++++.|+ |++||+
T Consensus 162 ~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 162 RDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA 240 (902)
T ss_dssp TEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 6 5678888886 89 99988653 3333333 46799999999999999999999 999999
Q ss_pred CCCceee
Q psy11524 235 SSSSSSN 241 (323)
Q Consensus 235 ~~~~~~~ 241 (323)
++++++.
T Consensus 241 ~~g~~~~ 247 (902)
T 2oaj_A 241 NSGHMIM 247 (902)
T ss_dssp TTCCEEE
T ss_pred CCCcEEE
Confidence 9887654
No 78
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.2e-32 Score=238.53 Aligned_cols=269 Identities=11% Similarity=0.144 Sum_probs=214.5
Q ss_pred eeeEeeccccee-EeeEeccCCcceeeeeecc---ccc-cccceeeecC-CCCCEEEEEEcCCCCeEEEEeeCCeEEEEe
Q psy11524 36 NHLTIRRYDGTV-INYPISPYISVLHSYAASH---SWP-QALSLCRTLN-VSPPVYSAAWSPDSNKVLLTQAKSLVIKPL 109 (323)
Q Consensus 36 ~~~~~~~~~~~v-~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~ 109 (323)
....+.+|...+ .++.+ ++..++....++ .|| .+.+....+. |...|.+++|+|++ .+++++.+ +.|++|
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~d-g~i~vw 188 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTD-RTVRVW 188 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETT-SCEEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCC-CCEEEE
Confidence 446788998885 55555 453333333322 244 2333334443 99999999999988 78877766 699999
Q ss_pred CCCCc--eeEeeccCCCeEEEEEC--CCCCEEEEEcCCCceEeeeEEeCCCCe------------------------eeE
Q psy11524 110 SPNNK--ATKWQAHDGLILKVAWC--SSTDLILSGGEDCKYKASFVWDTDGRQ------------------------LYS 161 (323)
Q Consensus 110 ~~~~~--~~~~~~~~~~v~~~~~~--~~~~~l~~~~~d~~i~~i~v~d~~~~~------------------------~~~ 161 (323)
+.... ...+.+|...|.+++|+ ++++++++++.|+.|+ +||+.... ...
T Consensus 189 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~---vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 189 DIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLH---VWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEE---EEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred ECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEE---EeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 98765 66788899999999998 5778999999999999 99995322 445
Q ss_pred eecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCc
Q psy11524 162 SLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSS 238 (323)
Q Consensus 162 ~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~ 238 (323)
+.+|...+.++ +++++++++++.| .|++||++.. ....+.+|...+.+++|+|+++++++++.|+ |++||+++++
T Consensus 266 ~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 266 LRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE 343 (464)
T ss_dssp ECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred ccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 66777777776 5778999999996 9999998754 5567778999999999999999999999999 9999999999
Q ss_pred eeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc---cCCCCccceeEEEEeeCCCeeEeeecCCeE
Q psy11524 239 SSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS---LDKPDTGSVYDLVWSSDATQIAGACANGSL 315 (323)
Q Consensus 239 ~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i 315 (323)
.+.+ +.+|...|.+++|++ ..+++++.++.+.+|++... ....|...+..++|+|++++|++++ ||.|
T Consensus 344 ~~~~--~~~h~~~v~~~~~~~------~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i 414 (464)
T 3v7d_B 344 LMYT--LQGHTALVGLLRLSD------KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQF 414 (464)
T ss_dssp EEEE--ECCCSSCEEEEEECS------SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEE
T ss_pred EEEE--EeCCCCcEEEEEEcC------CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeE
Confidence 9988 788999999999984 57888888999999988764 1112466788899999999999998 9999
Q ss_pred EEEEeec
Q psy11524 316 LLGTIIQ 322 (323)
Q Consensus 316 ~~~~l~~ 322 (323)
++|++.+
T Consensus 415 ~iwd~~~ 421 (464)
T 3v7d_B 415 NIYNLRS 421 (464)
T ss_dssp EEEETTT
T ss_pred EEEECCC
Confidence 9999743
No 79
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.3e-32 Score=243.94 Aligned_cols=273 Identities=15% Similarity=0.192 Sum_probs=215.1
Q ss_pred eeeEeecccc---eeEeeEeccC-Ccceeeeeecc---ccc-cccceeeec-----CCCCCEEEEEEcCCCCeEEEEeeC
Q psy11524 36 NHLTIRRYDG---TVINYPISPY-ISVLHSYAASH---SWP-QALSLCRTL-----NVSPPVYSAAWSPDSNKVLLTQAK 102 (323)
Q Consensus 36 ~~~~~~~~~~---~v~~~~~~~~-~~~~~~~~~~~---~~~-~~~~~~~~~-----~~~~~v~~~~~sp~~~~l~~~~~~ 102 (323)
....+.+|.. .|.++.|+|+ +..++....++ .|| .+.+....+ .|...|.+++|+ ++++|++++.+
T Consensus 195 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d 273 (615)
T 1pgu_A 195 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD 273 (615)
T ss_dssp EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT
T ss_pred eeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCC
Confidence 3456778998 9999999999 87666555444 366 445556666 789999999999 99999998777
Q ss_pred CeEEEEeCCCCc--eeEeecc----CCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEe
Q psy11524 103 SLVIKPLSPNNK--ATKWQAH----DGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWA 175 (323)
Q Consensus 103 ~~~v~~~~~~~~--~~~~~~~----~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~ 175 (323)
+.|++|+.... ...+..+ ...+.++.|+ +++++++++.|+.|+ +||+. ++.+..+..|...|.+++|
T Consensus 274 -~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~---~~d~~~~~~~~~~~~~~~~v~~~~~- 347 (615)
T 1pgu_A 274 -ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLN---FYELGHDEVLKTISGHNKGITALTV- 347 (615)
T ss_dssp -SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEE---EEETTEEEEEEEECCCSSCEEEEET-
T ss_pred -CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEE---EEECCCCcEEEEEeCCCCCEEEEEe-
Confidence 69999998765 4455544 4678888886 889999999999999 99986 4444445444444433333
Q ss_pred cC------------------------------------------------------------------------------
Q psy11524 176 PG------------------------------------------------------------------------------ 177 (323)
Q Consensus 176 p~------------------------------------------------------------------------------ 177 (323)
|+
T Consensus 348 ~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 427 (615)
T 1pgu_A 348 NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDD 427 (615)
T ss_dssp TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTS
T ss_pred cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCC
Confidence 22
Q ss_pred ----------------------------CCEEEEEeC-C-eEEEEeCCCCee--eecCCCCccEEEEEEcCCCCEEEEEe
Q psy11524 178 ----------------------------GDMFAVGSY-N-TLRLCDKVGWSH--SLDKPDTGSVYDLVWSNDATQIAGAC 225 (323)
Q Consensus 178 ----------------------------~~~l~~~~~-~-~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~~ 225 (323)
++++++++. + .|++||+.+... .....|...|.+++|+|++++|++++
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 507 (615)
T 1pgu_A 428 DLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD 507 (615)
T ss_dssp EEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcC
Confidence 334444444 4 566666554333 45567888999999999999999999
Q ss_pred cCc-EEEEEcCCCceeeeecCCC-CccceEEEEEcc----------CCCCccceEEEEeCCCCeEEEecccc-----cCC
Q psy11524 226 ANV-IHIFDISSSSSSNVTAPLS-HSHEITQLAVNQ----------TGSLQERHVAFIDKNRDLYLSMWSHS-----LDK 288 (323)
Q Consensus 226 ~d~-i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~p----------~g~~~d~~l~~~~~~~~~~~~~~~~~-----~~~ 288 (323)
.|+ |++||+.+++.+.. +.+ |...|++++|+| ++ ..|++++.++.+++|++... ...
T Consensus 508 ~dg~i~iw~~~~~~~~~~--~~~~h~~~v~~~~~sp~~~~~~~~~~~~----~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 581 (615)
T 1pgu_A 508 VMGKILLYDLQSREVKTS--RWAFRTSKINAISWKPAEKGANEEEIEE----DLVATGSLDTNIFIYSVKRPMKIIKALN 581 (615)
T ss_dssp TTSCEEEEETTTTEEEEC--CSCCCSSCEEEEEECCCC------CCSC----CEEEEEETTSCEEEEESSCTTCCEEETT
T ss_pred CCCeEEEeeCCCCcceeE--eecCCCCceeEEEEcCccccccccccCC----CEEEEEcCCCcEEEEECCCCceechhhh
Confidence 999 99999999999887 666 999999999999 88 89999999999999999874 456
Q ss_pred CCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 289 PDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 289 ~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
.|...|.+++|+|+++ |++++.||.|++|++..
T Consensus 582 ~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 582 AHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp SSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred cCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 7899999999999999 99999999999999853
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.7e-33 Score=259.49 Aligned_cols=234 Identities=14% Similarity=0.158 Sum_probs=205.6
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD- 155 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~- 155 (323)
.|.+.|.+++|+|++++|++++.+ +.|++|+.... ...+..|...|.+++|+|++++|++++.||.|+ +||+.
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~-g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~---vw~~~~ 86 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYS-GRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR---VFNYNT 86 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETT-SEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE---EEETTT
T ss_pred cCCCceEEEEECCCCCEEEEEeCC-CEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEE---EEECCC
Confidence 489999999999999999998766 69999997665 667888999999999999999999999999999 99985
Q ss_pred CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCC--eeeecCCCCccEEEEEEcC-CCCEEEEEecCc-EE
Q psy11524 156 GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGW--SHSLDKPDTGSVYDLVWSN-DATQIAGACANV-IH 230 (323)
Q Consensus 156 ~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~--~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~-i~ 230 (323)
++.+..+..|...|.+++|+|++++|++++.+ .|++||+.+. .......|...+.+++|+| +++.|++++.|+ |+
T Consensus 87 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~ 166 (814)
T 3mkq_A 87 GEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVK 166 (814)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEE
Confidence 77778888999999999999999999999996 9999998743 4456777999999999999 889999999999 99
Q ss_pred EEEcCCCceeeeecCCCCccceEEEEEcc--CCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCC
Q psy11524 231 IFDISSSSSSNVTAPLSHSHEITQLAVNQ--TGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDAT 304 (323)
Q Consensus 231 iwd~~~~~~~~~~~~~~~~~~v~~~~~~p--~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~ 304 (323)
+||+.+++..... ...+...+..++|+| ++ ..++++..++.+.+|+.... ....|...|.+++|+|+|+
T Consensus 167 vwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~----~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 241 (814)
T 3mkq_A 167 VWSLGQSTPNFTL-TTGQERGVNYVDYYPLPDK----PYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLP 241 (814)
T ss_dssp EEETTCSSCSEEE-ECCCTTCCCEEEECCSTTC----CEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSS
T ss_pred EEECCCCcceeEE-ecCCCCCEEEEEEEECCCC----CEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCC
Confidence 9999988777663 234448899999999 77 78888888888888887654 3445788999999999999
Q ss_pred eeEeeecCCeEEEEEee
Q psy11524 305 QIAGACANGSLLLGTII 321 (323)
Q Consensus 305 ~l~s~~~dg~i~~~~l~ 321 (323)
+|++++.||.|++|++.
T Consensus 242 ~l~~~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 242 IIISGSEDGTLKIWNSS 258 (814)
T ss_dssp EEEEEETTSCEEEEETT
T ss_pred EEEEEeCCCeEEEEECC
Confidence 99999999999999974
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-33 Score=258.58 Aligned_cols=233 Identities=15% Similarity=0.245 Sum_probs=203.4
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc----eeEeeccCCCeEEEEECCC--CCEEEEEcCCCceEeeeEE
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK----ATKWQAHDGLILKVAWCSS--TDLILSGGEDCKYKASFVW 152 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~i~v~ 152 (323)
.|.+.|++++|+|++++|++++.+ |.|++|+..+. ...+.+|.+.|.+++|+|+ +++|++++.||.|+ +|
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~d-g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~---vw 82 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSD-KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL---IW 82 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETT-TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE---EE
T ss_pred cCcceeEEEEECCCCCeEEEEECC-CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE---EE
Confidence 489999999999999999998777 69999997632 5667899999999999988 99999999999999 99
Q ss_pred eCCCC---eeeEeecCCCceeEEEEecC--CCEEEEEeCC-eEEEEeCCCC---eeeecCCCCccEEEEEEcC-------
Q psy11524 153 DTDGR---QLYSSLTHDHPISSLAWAPG--GDMFAVGSYN-TLRLCDKVGW---SHSLDKPDTGSVYDLVWSN------- 216 (323)
Q Consensus 153 d~~~~---~~~~~~~~~~~v~~~~~~p~--~~~l~~~~~~-~i~i~d~~~~---~~~~~~~~~~~v~~~~~~~------- 216 (323)
|+.+. ....+..|...|.+++|+|+ ++.+++++.| .|++||++.. .......|...|.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 99644 56677889999999999999 9999999996 9999998754 3345567899999999999
Q ss_pred ------CCCEEEEEecCc-EEEEEcCCCc----eeeeecCCCCccceEEEEEccC---CCCccceEEEEeCCCCeEEEec
Q psy11524 217 ------DATQIAGACANV-IHIFDISSSS----SSNVTAPLSHSHEITQLAVNQT---GSLQERHVAFIDKNRDLYLSMW 282 (323)
Q Consensus 217 ------~~~~l~~~~~d~-i~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~p~---g~~~d~~l~~~~~~~~~~~~~~ 282 (323)
++.++++++.|+ |++||++++. .... +.+|...|.+++|+|+ + ..+++++.++.+.+|++
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~--~~~h~~~V~~l~~sp~~~~~----~~l~s~s~Dg~I~iwd~ 236 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLEST--LEGHSDWVRDVAWSPTVLLR----SYLASVSQDRTCIIWTQ 236 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEE--ECCCSSCEEEEEECCCCSSS----EEEEEEESSSCEEEEEE
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeee--ecCCCCcEEEEEeccCCCCC----CEEEEEecCCEEEEecC
Confidence 589999999999 9999998873 3444 6789999999999999 7 89999999999999998
Q ss_pred ccc---------cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 283 SHS---------LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 283 ~~~---------~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
... ....|...|.+++|+|+|++|++++.||.|++|++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 237 DNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 763 223467899999999999999999999999999975
No 82
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.5e-32 Score=235.41 Aligned_cols=233 Identities=14% Similarity=0.216 Sum_probs=192.5
Q ss_pred CCCCCEEEEEEcC-CCCeEEEEeeCCeEEEEeCCCCc---------eeEeeccCCCeEEEEECCCC-CEEEEEcCCCceE
Q psy11524 79 NVSPPVYSAAWSP-DSNKVLLTQAKSLVIKPLSPNNK---------ATKWQAHDGLILKVAWCSST-DLILSGGEDCKYK 147 (323)
Q Consensus 79 ~~~~~v~~~~~sp-~~~~l~~~~~~~~~v~~~~~~~~---------~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~ 147 (323)
.|...|++++|+| ++++|++++.+ +.|++|+.... ...+.+|...|.+++|+|++ ++|++++.|+.|+
T Consensus 79 ~h~~~V~~~~~~p~~~~~l~s~s~d-g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 157 (402)
T 2aq5_A 79 GHTAPVLDIAWCPHNDNVIASGSED-CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVIL 157 (402)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETT-SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEE
T ss_pred cCCCCEEEEEeCCCCCCEEEEEeCC-CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEE
Confidence 4899999999999 89999988777 69999997653 56788999999999999998 6999999999999
Q ss_pred eeeEEeCC-CCeeeEe--ecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCC-eeeec-CCCCcc-EEEEEEcCCCCE
Q psy11524 148 ASFVWDTD-GRQLYSS--LTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGW-SHSLD-KPDTGS-VYDLVWSNDATQ 220 (323)
Q Consensus 148 ~i~v~d~~-~~~~~~~--~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~-~~~~~-~~~~~~-v~~~~~~~~~~~ 220 (323)
+||++ ++.+..+ ..|...|.+++|+|++++|++++.| .|++||++.. ....+ ..|.+. +.+++|+|++++
T Consensus 158 ---iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (402)
T 2aq5_A 158 ---VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKI 234 (402)
T ss_dssp ---EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEE
T ss_pred ---EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcE
Confidence 99996 5666677 6799999999999999999999996 9999998865 44444 567665 899999999999
Q ss_pred EEEE---ecCc-EEEEEcCCCce-eeeecCCCCccceEEEEEccCCCCccceEEE-EeCCCCeEEEeccccc-----CC-
Q psy11524 221 IAGA---CANV-IHIFDISSSSS-SNVTAPLSHSHEITQLAVNQTGSLQERHVAF-IDKNRDLYLSMWSHSL-----DK- 288 (323)
Q Consensus 221 l~~~---~~d~-i~iwd~~~~~~-~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~-~~~~~~~~~~~~~~~~-----~~- 288 (323)
|+++ +.|+ |++||+++++. +... ...+...+..++|+|++ ..+++ +..++.+.+|++.... ..
T Consensus 235 l~~g~~~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~v~~~~~s~~~----~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~ 309 (402)
T 2aq5_A 235 LTTGFSRMSERQVALWDTKHLEEPLSLQ-ELDTSSGVLLPFFDPDT----NIVYLCGKGDSSIRYFEITSEAPFLHYLSM 309 (402)
T ss_dssp EEEEECTTCCEEEEEEETTBCSSCSEEE-ECCCCSSCEEEEEETTT----TEEEEEETTCSCEEEEEECSSTTCEEEEEE
T ss_pred EEEeccCCCCceEEEEcCccccCCceEE-eccCCCceeEEEEcCCC----CEEEEEEcCCCeEEEEEecCCCcceEeecc
Confidence 9999 6889 99999998764 3221 23567789999999998 67765 4468899999987641 11
Q ss_pred -CCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 289 -PDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 289 -~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
.|...|.+++|+|++.++++ .++.+++|++.+
T Consensus 310 ~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 310 FSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp ECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred cccCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 14588999999999998875 466999999854
No 83
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.7e-33 Score=232.34 Aligned_cols=233 Identities=14% Similarity=0.180 Sum_probs=195.1
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeC---CeEEEEeCCCCc-e--eEeeccCCCeEEEEECCC---CCEEEEEcCCCceEee
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAK---SLVIKPLSPNNK-A--TKWQAHDGLILKVAWCSS---TDLILSGGEDCKYKAS 149 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~---~~~v~~~~~~~~-~--~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~i 149 (323)
.|...|.+++|+|+++.+++++.. ++.|++|+.... . .....|...|.+++|+|+ +++|++++.||.|+
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~-- 93 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLH-- 93 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEE--
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEE--
Confidence 399999999999999877766543 589999998765 2 223478999999999998 69999999999999
Q ss_pred eEEeCC-CC-eeeEeecCCCceeEEEE------ecCCCEEEEEeCC-eEEEEeCCCC--eeeecCCCCc----cEEEEE-
Q psy11524 150 FVWDTD-GR-QLYSSLTHDHPISSLAW------APGGDMFAVGSYN-TLRLCDKVGW--SHSLDKPDTG----SVYDLV- 213 (323)
Q Consensus 150 ~v~d~~-~~-~~~~~~~~~~~v~~~~~------~p~~~~l~~~~~~-~i~i~d~~~~--~~~~~~~~~~----~v~~~~- 213 (323)
+||+. ++ ....+..|...|.+++| +|++++|++++.+ .|++||++.. ....+..+.+ .+.+++
T Consensus 94 -iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~ 172 (357)
T 3i2n_A 94 -IWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAF 172 (357)
T ss_dssp -EECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEE
T ss_pred -EEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEE
Confidence 99996 44 67888899999999955 6789999999996 9999998753 3444444433 788888
Q ss_pred ---EcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEcc---CCCCccceEEEEeCCCCeEEEecccc-
Q psy11524 214 ---WSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQ---TGSLQERHVAFIDKNRDLYLSMWSHS- 285 (323)
Q Consensus 214 ---~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p---~g~~~d~~l~~~~~~~~~~~~~~~~~- 285 (323)
|+|++++|++++.|+ |++||+++++.... ..+...+.+++|+| ++ ..++++..++.+.+|++...
T Consensus 173 ~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~---~~~~~~v~~~~~~~~~~~~----~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 173 GNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE---TNIKNGVCSLEFDRKDISM----NKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp ECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE---EECSSCEEEEEESCSSSSC----CEEEEEESTTEEEEEEEEEEE
T ss_pred EeccCCCCCEEEEEccCCeEEEEECccCceeee---cCCCCceEEEEcCCCCCCC----CEEEEECCCCeEEEEeCcCCC
Confidence 788999999999999 99999999887654 56788999999999 77 88999999999999998765
Q ss_pred ---cC-----CCCccceeEEEEeeCCC-eeEeeecCCeEEEEEee
Q psy11524 286 ---LD-----KPDTGSVYDLVWSSDAT-QIAGACANGSLLLGTII 321 (323)
Q Consensus 286 ---~~-----~~~~~~v~~~~~s~~g~-~l~s~~~dg~i~~~~l~ 321 (323)
.. ..|...|.+++|+|+++ +|++++.||.|++|++.
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 246 PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 11 26789999999999998 89999999999999985
No 84
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.5e-33 Score=233.13 Aligned_cols=233 Identities=10% Similarity=0.059 Sum_probs=196.8
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-----eeEeeccCCCeEEEEECCCCC-EEEEEcCCCceEeeeEE
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-----ATKWQAHDGLILKVAWCSSTD-LILSGGEDCKYKASFVW 152 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~i~v~ 152 (323)
.|.+.|++++|+|++++|++++.+ +.|++|+.... ...+..|...|.+++|+|+++ +|++++.||.|+ +|
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d-~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~---~w 84 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWD-GSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL---KV 84 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETT-SEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEE---EE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCC-CeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEE---EE
Confidence 489999999999999999998777 59999987543 455678999999999999999 999999999999 99
Q ss_pred eC-CCCeeeEeec--CCCceeEEEEecCCCEEEEEeCC-eEEEEeCCC---------CeeeecCCCCccEEEEEEcCCCC
Q psy11524 153 DT-DGRQLYSSLT--HDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVG---------WSHSLDKPDTGSVYDLVWSNDAT 219 (323)
Q Consensus 153 d~-~~~~~~~~~~--~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~---------~~~~~~~~~~~~v~~~~~~~~~~ 219 (323)
|+ +......+.. |...|.+++|+| +.++++++.+ .|++||++. ........|...+.+++|+|++
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 85 DLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR- 162 (342)
T ss_dssp CSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-
T ss_pred EeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-
Confidence 99 8878888888 999999999999 9999999996 999999764 3322223388899999999987
Q ss_pred EEEEEecCc-EEEEEcCC-CceeeeecCCCCccceEEEEEcc-CCCCccceEEEEeCCCCeEEEecccc----------c
Q psy11524 220 QIAGACANV-IHIFDISS-SSSSNVTAPLSHSHEITQLAVNQ-TGSLQERHVAFIDKNRDLYLSMWSHS----------L 286 (323)
Q Consensus 220 ~l~~~~~d~-i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~p-~g~~~d~~l~~~~~~~~~~~~~~~~~----------~ 286 (323)
+++++.++ |++||+++ +..........+...+.+++|+| ++ ..+++++.++.+.+|++... .
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~----~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 237 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQ----EGYACSSIDGRVAVEFFDDQGDDYNSSKRFA 237 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGG----CEEEEEETTSEEEEEECCTTCCSTTCTTCEE
T ss_pred -EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCC----CEEEEEecCCcEEEEEEcCCCccccccccee
Confidence 99999999 99999998 55322211456788999999999 98 78999999999999887542 2
Q ss_pred CCCCc---------cceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 287 DKPDT---------GSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 287 ~~~~~---------~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
...|. ..|.+++|+|++++|++++.||.|++|++.+
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~ 282 (342)
T 1yfq_A 238 FRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQT 282 (342)
T ss_dssp EECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred eecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCcc
Confidence 22343 3999999999999999999999999999753
No 85
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-34 Score=252.82 Aligned_cols=240 Identities=12% Similarity=0.085 Sum_probs=187.7
Q ss_pred ceeeecCCCCCEEEEEEcCCC---------CeEEEEee------------------CCeEEEEeCCCCc-e-----eEee
Q psy11524 73 SLCRTLNVSPPVYSAAWSPDS---------NKVLLTQA------------------KSLVIKPLSPNNK-A-----TKWQ 119 (323)
Q Consensus 73 ~~~~~~~~~~~v~~~~~sp~~---------~~l~~~~~------------------~~~~v~~~~~~~~-~-----~~~~ 119 (323)
+....+.+.+.|.+|+|+|++ ++||+++. .++.|++|+.... . ..+.
T Consensus 125 r~~~~~~~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~ 204 (524)
T 2j04_B 125 RRGFIYNVGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV 204 (524)
T ss_dssp SCEEEEECCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEE
T ss_pred cceEEEECCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEE
Confidence 333445567777777777765 56666542 2368999987544 1 2356
Q ss_pred ccCCCeEEEEECCC------CCEEEEEcCCCceEeeeEEeCCCCe------------eeEeecCCCceeEEEEecCCCEE
Q psy11524 120 AHDGLILKVAWCSS------TDLILSGGEDCKYKASFVWDTDGRQ------------LYSSLTHDHPISSLAWAPGGDMF 181 (323)
Q Consensus 120 ~~~~~v~~~~~~~~------~~~l~~~~~d~~i~~i~v~d~~~~~------------~~~~~~~~~~v~~~~~~p~~~~l 181 (323)
.|.+.|.+++|+|+ +.+||+++.||+|+ +||+.... ...+.+|...|.+++|+|++ .|
T Consensus 205 ~~~~~V~~v~wsp~~~~~~~~~~LAs~s~Dgtvr---lWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~l 280 (524)
T 2j04_B 205 HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTIN---FLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TV 280 (524)
T ss_dssp ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEE---EEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EE
T ss_pred ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEE---EEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eE
Confidence 67889999999997 57999999999999 99995321 23567788999999999864 79
Q ss_pred EEEeCC-eEEEEeCCCC--eeeecCCCCccEEEE--EEcCCC-CEEEEEecCc-EEEEEcCCCceeeeecCCCCc--cce
Q psy11524 182 AVGSYN-TLRLCDKVGW--SHSLDKPDTGSVYDL--VWSNDA-TQIAGACANV-IHIFDISSSSSSNVTAPLSHS--HEI 252 (323)
Q Consensus 182 ~~~~~~-~i~i~d~~~~--~~~~~~~~~~~v~~~--~~~~~~-~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~--~~v 252 (323)
++|+.| +|++||+++. ....+..|...|.++ +|+|+| .+|++++.|+ |+|||+++++.... +.+|. ..+
T Consensus 281 asgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~--~~~~~~~~~v 358 (524)
T 2j04_B 281 VCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKT--TVSRFRGSNL 358 (524)
T ss_dssp EEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCE--EEEECSCCSC
T ss_pred EEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccc--cccccccCcc
Confidence 999996 9999999743 334567899999999 578888 8999999999 99999998877665 33443 357
Q ss_pred EEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 253 TQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 253 ~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
.+++|+|++ ..++..+.++.+++|++... ....|...|++++|||+|++|++|+.||+|++|++..
T Consensus 359 ~~v~fsp~~----~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 359 VPVVYCPQI----YSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CCEEEETTT----TEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred cceEeCCCc----CeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 899999998 67888888888999988764 2345889999999999999999999999999998643
No 86
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=7.3e-32 Score=223.45 Aligned_cols=261 Identities=16% Similarity=0.243 Sum_probs=208.1
Q ss_pred eEeeEeccCCcceeeeeecc---ccc-cccceeeec---CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeE
Q psy11524 47 VINYPISPYISVLHSYAASH---SWP-QALSLCRTL---NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATK 117 (323)
Q Consensus 47 v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~ 117 (323)
+..++||+++ .|+..+ ++ .|| .+.++.+.+ .|...|++++|+|++++|++|+.+ +.|++|+.... +..
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D-g~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-AEVQLWDVQQQKRLRN 104 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-SEEEEEETTTTEEEEE
T ss_pred ceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC-CcEEEeecCCceeEEE
Confidence 4568899886 343322 22 476 344444444 378899999999999999999877 59999998776 667
Q ss_pred eeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC--CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeC
Q psy11524 118 WQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD--GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDK 194 (323)
Q Consensus 118 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~--~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~ 194 (323)
+..|...+.++.+ ++..+++++.++.++ +|+.. ...+..+.+|...+..+.++++++++++++.| .|++||+
T Consensus 105 ~~~h~~~~~~~~~--~~~~l~s~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 105 MTSHSARVGSLSW--NSYILSSGSRSGHIH---HHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp EECCSSCEEEEEE--ETTEEEEEETTSEEE---EEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEES
T ss_pred ecCccceEEEeec--CCCEEEEEecCCceE---eeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEEC
Confidence 8889988876655 567999999999999 99985 45667788899999999999999999999996 9999998
Q ss_pred CCC-----eeeecCCCCccEEEEEEcCCCCEE---EEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCcc
Q psy11524 195 VGW-----SHSLDKPDTGSVYDLVWSNDATQI---AGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQE 265 (323)
Q Consensus 195 ~~~-----~~~~~~~~~~~v~~~~~~~~~~~l---~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d 265 (323)
+.. .......+.+.+..++++|++..+ ++++.++ |++||.+....... ..+...+..+.|+|++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~---~~~~~~v~~~~~~~~~---- 252 (318)
T 4ggc_A 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA---VDAHSQVCSILWSPHY---- 252 (318)
T ss_dssp SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEE---EECSSCEEEEEEETTT----
T ss_pred CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccc---ccceeeeeeeeecccc----
Confidence 743 223455677889999999976543 3455677 99999998887765 4566789999999998
Q ss_pred ceEEEEe--CCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 266 RHVAFID--KNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 266 ~~l~~~~--~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
+.+.+.. .++.+++|++... .+.+|.+.|++++|+|+|++|++|+.||+|++|++.+
T Consensus 253 ~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 253 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred cceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 5555543 6788888888765 5567899999999999999999999999999999865
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.9e-32 Score=245.63 Aligned_cols=271 Identities=13% Similarity=0.180 Sum_probs=213.1
Q ss_pred eeeEeecccce-eEeeEecc--CCcceeeeeecc---cccc---------ccceeeecC-CCCCEEEEEEcCCCCeEEEE
Q psy11524 36 NHLTIRRYDGT-VINYPISP--YISVLHSYAASH---SWPQ---------ALSLCRTLN-VSPPVYSAAWSPDSNKVLLT 99 (323)
Q Consensus 36 ~~~~~~~~~~~-v~~~~~~~--~~~~~~~~~~~~---~~~~---------~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~ 99 (323)
....+.+|... |.++.|+| +++.++....++ .|+. ..++...+. |...|.+++|+|++++|+++
T Consensus 55 ~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 55 PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 134 (615)
T ss_dssp SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred cceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEe
Confidence 44678899999 99999999 997665544443 3553 123333343 89999999999999999998
Q ss_pred eeCC---eEEEEeCCCCceeEeeccCCCeEEEEECCCCC-EEEEEcCCCceEeeeEEeCC-CCeeeEeecCCC---ceeE
Q psy11524 100 QAKS---LVIKPLSPNNKATKWQAHDGLILKVAWCSSTD-LILSGGEDCKYKASFVWDTD-GRQLYSSLTHDH---PISS 171 (323)
Q Consensus 100 ~~~~---~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~---~v~~ 171 (323)
+.+. +.|++|+.......+..|...|.+++|+|+++ .+++++.|+.|+ +||+. ++.+..+..|.. .|.+
T Consensus 135 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~---vwd~~~~~~~~~~~~~~~~~~~v~~ 211 (615)
T 1pgu_A 135 GEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVV---FYQGPPFKFSASDRTHHKQGSFVRD 211 (615)
T ss_dssp ECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEE---EEETTTBEEEEEECSSSCTTCCEEE
T ss_pred ccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEE---EEeCCCcceeeeecccCCCCceEEE
Confidence 8663 79999997766888899999999999999998 899999999999 99996 566677888888 9999
Q ss_pred EEEecC-CCEEEEEeCC-eEEEEeCCCC-eeeec-C---CCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeee
Q psy11524 172 LAWAPG-GDMFAVGSYN-TLRLCDKVGW-SHSLD-K---PDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVT 243 (323)
Q Consensus 172 ~~~~p~-~~~l~~~~~~-~i~i~d~~~~-~~~~~-~---~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~ 243 (323)
++|+|+ +++|++++.+ .|++||++.. ....+ . .|...|.+++|+ ++++|++++.|+ |++||+++++.+..+
T Consensus 212 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 212 VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKW 290 (615)
T ss_dssp EEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 999999 9999999986 9999998754 44455 4 799999999999 999999999999 999999999888773
Q ss_pred cCC--CCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEE
Q psy11524 244 APL--SHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLL 317 (323)
Q Consensus 244 ~~~--~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~ 317 (323)
... .....+.++.|. ++ ..+++++.++.+.+|++... ....|...|.+++| |+ |++++.||.|++
T Consensus 291 ~~~~~~~~~~~~~~~~~-~~----~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i~~ 361 (615)
T 1pgu_A 291 TLDKQQLGNQQVGVVAT-GN----GRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRIME 361 (615)
T ss_dssp ECCTTCGGGCEEEEEEE-ET----TEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCEEE
T ss_pred cCCCCcccCceeEEEeC-CC----CeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeEEE
Confidence 222 124677888886 65 78888888999999887653 33445566666666 54 444444444444
Q ss_pred EE
Q psy11524 318 GT 319 (323)
Q Consensus 318 ~~ 319 (323)
|+
T Consensus 362 w~ 363 (615)
T 1pgu_A 362 WS 363 (615)
T ss_dssp TT
T ss_pred EE
Confidence 43
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.7e-32 Score=225.08 Aligned_cols=240 Identities=17% Similarity=0.217 Sum_probs=200.4
Q ss_pred cccceeeecC-CCCCEEEEEEcCC-CCeEEEEeeCCeEEEEeCCCCc-------eeEeeccCCCeEEEEECCCCCEEEEE
Q psy11524 70 QALSLCRTLN-VSPPVYSAAWSPD-SNKVLLTQAKSLVIKPLSPNNK-------ATKWQAHDGLILKVAWCSSTDLILSG 140 (323)
Q Consensus 70 ~~~~~~~~~~-~~~~v~~~~~sp~-~~~l~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~l~~~ 140 (323)
.+..+..+|+ |.+.|++++|+|+ +++|++|+.| +.|++|+.... ...+.+|...|.+++|+|++++|+++
T Consensus 26 ~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D-~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~ 104 (340)
T 4aow_A 26 EQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRD-KTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSG 104 (340)
T ss_dssp CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETT-SCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCC-CeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEE
Confidence 4445555664 9999999999998 5788888877 59999987542 45678899999999999999999999
Q ss_pred cCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCee--eecCCCCccEEEEEEcC
Q psy11524 141 GEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSH--SLDKPDTGSVYDLVWSN 216 (323)
Q Consensus 141 ~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~--~~~~~~~~~v~~~~~~~ 216 (323)
+.|+.|+ +|+.. .........+...+....++|++.+|++++.| .+++||...... .....|...+..++|++
T Consensus 105 ~~d~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~ 181 (340)
T 4aow_A 105 SWDGTLR---LWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP 181 (340)
T ss_dssp ETTSEEE---EEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECS
T ss_pred cccccce---EEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEcc
Confidence 9999999 99996 44555666677888999999999999999996 999999875533 34567889999999998
Q ss_pred CC--CEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCC
Q psy11524 217 DA--TQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKP 289 (323)
Q Consensus 217 ~~--~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~ 289 (323)
++ .++++++.|+ |++||+++++.+.. +.+|...|.+++|+|++ ..+++++.++.+.+|++... ...
T Consensus 182 ~~~~~~~~s~~~d~~i~i~d~~~~~~~~~--~~~h~~~v~~~~~s~~~----~~l~s~s~Dg~i~iwd~~~~~~~~~~~- 254 (340)
T 4aow_A 182 NSSNPIIVSCGWDKLVKVWNLANCKLKTN--HIGHTGYLNTVTVSPDG----SLCASGGKDGQAMLWDLNEGKHLYTLD- 254 (340)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTS----SEEEEEETTCEEEEEETTTTEEEEEEE-
T ss_pred CCCCcEEEEEcCCCEEEEEECCCCceeeE--ecCCCCcEEEEEECCCC----CEEEEEeCCCeEEEEEeccCceeeeec-
Confidence 64 4788999999 99999999998888 78899999999999998 78888888888999988764 222
Q ss_pred CccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 290 DTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 290 ~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
+...+.+++|+|++. +++++.|+.|++|++.
T Consensus 255 ~~~~v~~~~~~~~~~-~~~~~~d~~i~iwd~~ 285 (340)
T 4aow_A 255 GGDIINALCFSPNRY-WLCAATGPSIKIWDLE 285 (340)
T ss_dssp CSSCEEEEEECSSSS-EEEEEETTEEEEEETT
T ss_pred CCceEEeeecCCCCc-eeeccCCCEEEEEECC
Confidence 256899999999875 5566779999999874
No 89
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=9.4e-33 Score=238.97 Aligned_cols=234 Identities=15% Similarity=0.096 Sum_probs=185.6
Q ss_pred CCCCEEEEEEcCC-CCeEEEEeeCCeEEEEeCCCCc----eeEeeccCCCeEEEEECC-CCCEEEEEcCCCceEeeeEEe
Q psy11524 80 VSPPVYSAAWSPD-SNKVLLTQAKSLVIKPLSPNNK----ATKWQAHDGLILKVAWCS-STDLILSGGEDCKYKASFVWD 153 (323)
Q Consensus 80 ~~~~v~~~~~sp~-~~~l~~~~~~~~~v~~~~~~~~----~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~i~v~d 153 (323)
|...|++++|+|. ++.||+|+.+ |.|++||.... ...+.+|.+.|.+++|+| ++++|++++.||+|+ +||
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~d-g~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~---iwd 193 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKG-GDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTR---LQD 193 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETT-SCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEE---EEE
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCC-CEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEE---Eee
Confidence 7889999999995 5678877666 69999998654 334568999999999998 689999999999999 999
Q ss_pred CCCCeeeEeecC---CCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCC-EEEEEecCc
Q psy11524 154 TDGRQLYSSLTH---DHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDAT-QIAGACANV 228 (323)
Q Consensus 154 ~~~~~~~~~~~~---~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~ 228 (323)
++++....+..+ ...+.+++|+|++++|++|+.+ .|++||+++..+..+..|...|.+++|+|++. +|++++.|+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~ 273 (435)
T 4e54_B 194 FKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQ 273 (435)
T ss_dssp TTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTS
T ss_pred ccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcc
Confidence 987766655443 3457899999999999999996 99999999887778888999999999999876 678899999
Q ss_pred -EEEEEcCCCceeeee-cCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCc------cceeE
Q psy11524 229 -IHIFDISSSSSSNVT-APLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDT------GSVYD 296 (323)
Q Consensus 229 -i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~------~~v~~ 296 (323)
|++||+++.+....+ ...+|...|.+++|+|++ ..|++++.++.+++|++... ....|. ..+..
T Consensus 274 ~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg----~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (435)
T 4e54_B 274 TVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDG----ARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIK 349 (435)
T ss_dssp BCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTS----SEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCB
T ss_pred eeeEEecccccccceEEEeeeccccccceeECCCC----CeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEE
Confidence 999999887654431 135688999999999999 89999999999999998764 111111 12334
Q ss_pred EEEeeCCCeeEeee------------cCCeEEEEEee
Q psy11524 297 LVWSSDATQIAGAC------------ANGSLLLGTII 321 (323)
Q Consensus 297 ~~~s~~g~~l~s~~------------~dg~i~~~~l~ 321 (323)
..|+|++..++++. .++.|++|++.
T Consensus 350 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~ 386 (435)
T 4e54_B 350 AAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGN 386 (435)
T ss_dssp CEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSS
T ss_pred EEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECC
Confidence 45666665555443 34679999863
No 90
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4e-33 Score=270.10 Aligned_cols=268 Identities=18% Similarity=0.157 Sum_probs=226.4
Q ss_pred eeEeecccceeEeeEeccCCcceeeeeeccccccccceeee---------------------------------------
Q psy11524 37 HLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCRT--------------------------------------- 77 (323)
Q Consensus 37 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 77 (323)
...+.+|.+.|.++.|+|++..++ +++.|+..++|..
T Consensus 875 ~~~~~~h~~~v~~v~~spdg~~l~----s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 950 (1249)
T 3sfz_A 875 VADCRGHLSWVHGVMFSPDGSSFL----TASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIA 950 (1249)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEE----EEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEE
T ss_pred eeecCCCccceEEEEECCCCCEEE----EEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEe
Confidence 456789999999999999996544 4444444443321
Q ss_pred -------cCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEe
Q psy11524 78 -------LNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKA 148 (323)
Q Consensus 78 -------~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 148 (323)
..+...+.+++|+|+++++++++.+ |.|++|+.... ...+..|...|.+++|+|++++|++++.||.|+
T Consensus 951 ~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~-g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~- 1028 (1249)
T 3sfz_A 951 GKTGQIDYLPEAQVSCCCLSPHLEYVAFGDED-GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQ- 1028 (1249)
T ss_dssp ESSCCEEEECCSCEEEEEECTTSSEEEEEETT-SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEE-
T ss_pred cCcceEEEcccCcEEEEEEcCCCCEEEEEcCC-CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEE-
Confidence 1145689999999999999988776 69999998765 566788999999999999999999999999999
Q ss_pred eeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeC-CeEEEEeCCC-CeeeecCCCCccEEEEEEcCCCCEEEEEec
Q psy11524 149 SFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-NTLRLCDKVG-WSHSLDKPDTGSVYDLVWSNDATQIAGACA 226 (323)
Q Consensus 149 i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 226 (323)
+||+.......+..|...+.+++|+|++. +++++. +.+++||+.+ .....+..|...|.+++|+|+++++++++.
T Consensus 1029 --vwd~~~~~~~~~~~~~~~v~~~~~~~~~~-l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~ 1105 (1249)
T 3sfz_A 1029 --VWNWQTGDYVFLQAHQETVKDFRLLQDSR-LLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSA 1105 (1249)
T ss_dssp --EEETTTTEEECCBCCSSCEEEEEECSSSE-EEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECC
T ss_pred --EEECCCCceEEEecCCCcEEEEEEcCCCc-EEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcC
Confidence 99998777777788999999999999775 556666 5999999874 455677789999999999999999999999
Q ss_pred Cc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----c---------CCCCcc
Q psy11524 227 NV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----L---------DKPDTG 292 (323)
Q Consensus 227 d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~---------~~~~~~ 292 (323)
|+ |++||+.+++++.. +.+|...|.+++|+|++ ..+++++.++.+.+|++..+ . ...|.+
T Consensus 1106 d~~v~iwd~~~~~~~~~--l~~h~~~v~~~~~s~dg----~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 1179 (1249)
T 3sfz_A 1106 DKTAKIWSFDLLSPLHE--LKGHNGCVRCSAFSLDG----ILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGG 1179 (1249)
T ss_dssp SSCCCEECSSSSSCSBC--CCCCSSCEEEEEECSSS----SEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCS
T ss_pred CCcEEEEECCCcceeee--eccCCCcEEEEEECCCC----CEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCc
Confidence 99 99999999998887 78899999999999999 89999999999999999865 1 134788
Q ss_pred ceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 293 SVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 293 ~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
.|.+++|+|||++|++++ |.|++|++.
T Consensus 1180 ~v~~l~fs~dg~~l~s~~--g~v~vwd~~ 1206 (1249)
T 3sfz_A 1180 WVTDVCFSPDSKTLVSAG--GYLKWWNVA 1206 (1249)
T ss_dssp CCCEEEECTTSSCEEEES--SSEEEBCSS
T ss_pred eEEEEEECCCCCEEEECC--CeEEEEECC
Confidence 999999999999999885 899999974
No 91
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=9.5e-33 Score=235.93 Aligned_cols=233 Identities=11% Similarity=0.024 Sum_probs=195.9
Q ss_pred eec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--------eeEeeccCCCeEEEEECCC----C---CEEEE
Q psy11524 76 RTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--------ATKWQAHDGLILKVAWCSS----T---DLILS 139 (323)
Q Consensus 76 ~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--------~~~~~~~~~~v~~~~~~~~----~---~~l~~ 139 (323)
+.+ .|...|++++|+| ++|++++.+ +.|++|+.... ...+..|...|.+++|+|+ + ++|++
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGD-GYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETT-SEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCC-CEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEE
Confidence 344 4999999999999 788888776 69999987653 5667889999999999999 9 99999
Q ss_pred EcCCCceEeeeEEeCC-CCe-----eeEeecC-----CCceeEEEEe----cCCCE-EEEEeCC-eEEEEeCCC------
Q psy11524 140 GGEDCKYKASFVWDTD-GRQ-----LYSSLTH-----DHPISSLAWA----PGGDM-FAVGSYN-TLRLCDKVG------ 196 (323)
Q Consensus 140 ~~~d~~i~~i~v~d~~-~~~-----~~~~~~~-----~~~v~~~~~~----p~~~~-l~~~~~~-~i~i~d~~~------ 196 (323)
++.|+.|+ +|++. ++. ...+..| ...|.+++|+ |++++ |++++.+ .|++||++.
T Consensus 87 ~~~dg~i~---iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 87 TSFSGDLL---FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EETTSCEE---EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EcCCCCEE---EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999 99996 443 6777777 5899999999 99999 9999986 999999765
Q ss_pred -Ceee-----ec-------CCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCC---C---ccceEEEE
Q psy11524 197 -WSHS-----LD-------KPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLS---H---SHEITQLA 256 (323)
Q Consensus 197 -~~~~-----~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~---~---~~~v~~~~ 256 (323)
.... .+ ..|...+.+++|+|++ +|++++.|+ |++||+++++.+.. +.. | ...+.+++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~--~~~~~~h~~~~~~i~~i~ 240 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYN--FESQHSMINNSNSIRSVK 240 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEE--EECCC---CCCCCEEEEE
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEE--EeccccccccCCccceEE
Confidence 2222 33 4478889999999999 999999999 99999999988887 566 7 88999999
Q ss_pred EccCCCCccceEEEEeCC---CCeEEEecccc----cCCC-------------CccceeEEEEeeCCCeeEeeecCCeEE
Q psy11524 257 VNQTGSLQERHVAFIDKN---RDLYLSMWSHS----LDKP-------------DTGSVYDLVWSSDATQIAGACANGSLL 316 (323)
Q Consensus 257 ~~p~g~~~d~~l~~~~~~---~~~~~~~~~~~----~~~~-------------~~~~v~~~~~s~~g~~l~s~~~dg~i~ 316 (323)
|+|++ ..+++++.+ +.+.+|++... .... |...|.+++|+|++++|++++.||.|+
T Consensus 241 ~~~~~----~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 241 FSPQG----SLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp ECSST----TEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred ECCCC----CEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 99998 788888888 88888887654 3334 789999999999999999999999999
Q ss_pred EEEee
Q psy11524 317 LGTII 321 (323)
Q Consensus 317 ~~~l~ 321 (323)
+|++.
T Consensus 317 iwd~~ 321 (397)
T 1sq9_A 317 FWDVK 321 (397)
T ss_dssp EEETT
T ss_pred EEEcC
Confidence 99974
No 92
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6e-32 Score=228.32 Aligned_cols=234 Identities=13% Similarity=0.130 Sum_probs=198.1
Q ss_pred eecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEe
Q psy11524 76 RTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWD 153 (323)
Q Consensus 76 ~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d 153 (323)
....|...|++++|+|++++|++++.+ +.|++|+.... ...+..|...|.+++|+|++++|++++.||.|+ +||
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~d-g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~---iwd 102 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKD-SSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIK---LWD 102 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESS-SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEE---EEE
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCC-CEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEE---EEE
Confidence 334599999999999999999998777 59999997655 677888999999999999999999999999999 999
Q ss_pred CC-CCeeeEeecCCCceeEEEEecCCCEEEEEeC------CeEEEEeCCCC------------eeeecCCCCc--cEEEE
Q psy11524 154 TD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSY------NTLRLCDKVGW------------SHSLDKPDTG--SVYDL 212 (323)
Q Consensus 154 ~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~------~~i~i~d~~~~------------~~~~~~~~~~--~v~~~ 212 (323)
+. ++.+..+. +...+.+++|+|+++++++++. +.|++||+... .......+.. .+.++
T Consensus 103 ~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 103 VSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp TTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 96 55555555 8889999999999999998876 48999997532 1222333444 89999
Q ss_pred EEcCCCCEEEEEecCc-EEEEEcCC-CceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----c
Q psy11524 213 VWSNDATQIAGACANV-IHIFDISS-SSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----L 286 (323)
Q Consensus 213 ~~~~~~~~l~~~~~d~-i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~ 286 (323)
+|+|++++|++++.|+ |++||+++ ++.+.. +..|...|.+++|+|++ ..+++.+.++.+.+|++... .
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~~v~~~~~~~~~----~~l~~~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDS--IDLHEKSISDMQFSPDL----TYFITSSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTTEEEEE--EECCSSCEEEEEECTTS----SEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEE--EecCCCceeEEEECCCC----CEEEEecCCceEEEEECCCCceeee
Confidence 9999999999999999 99999998 677766 67788999999999998 78888888999999998764 2
Q ss_pred CCCCccceeEEEEeeCCCeeEeeecCC--------------eEEEEEee
Q psy11524 287 DKPDTGSVYDLVWSSDATQIAGACANG--------------SLLLGTII 321 (323)
Q Consensus 287 ~~~~~~~v~~~~~s~~g~~l~s~~~dg--------------~i~~~~l~ 321 (323)
.. +...+.+++|+|+++++++++.++ .+++|++.
T Consensus 256 ~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 256 YE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp EE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred ec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 22 467899999999999999999998 78888863
No 93
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.4e-32 Score=228.07 Aligned_cols=272 Identities=14% Similarity=0.122 Sum_probs=209.3
Q ss_pred eeeeEeecccceeEeeEeccC---Ccceeeeeecc---ccccc--ccee-eec-CCCCCEEEEEEcCCCCeEEEEeeCCe
Q psy11524 35 KNHLTIRRYDGTVINYPISPY---ISVLHSYAASH---SWPQA--LSLC-RTL-NVSPPVYSAAWSPDSNKVLLTQAKSL 104 (323)
Q Consensus 35 ~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~~~~---~~~~~--~~~~-~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~ 104 (323)
.....+.+|.+.|.++.|+|+ |..++....++ .|+.. .... ..+ .|...|++++|+|++++|++++.+ +
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-g 108 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-K 108 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-S
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-C
Confidence 444567899999999999999 56555544444 35422 2221 233 389999999999999999988777 6
Q ss_pred EEEEeCCCCc-eeEeeccCCCeEEEEE--CCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCE
Q psy11524 105 VIKPLSPNNK-ATKWQAHDGLILKVAW--CSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDM 180 (323)
Q Consensus 105 ~v~~~~~~~~-~~~~~~~~~~v~~~~~--~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~ 180 (323)
.|++|+.... ...+..|...|.+++| +|++++|++++.|+.|+ +||++ ++.+..+..+ ..+.++.+.+ ..
T Consensus 109 ~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~---vwd~~~~~~~~~~~~~-~~~~~~~~~~--~~ 182 (368)
T 3mmy_A 109 TAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLK---FWDTRSSNPMMVLQLP-ERCYCADVIY--PM 182 (368)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEE---EECSSCSSCSEEEECS-SCEEEEEEET--TE
T ss_pred cEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEE---EEECCCCcEEEEEecC-CCceEEEecC--Ce
Confidence 9999998776 5567789999999999 89999999999999999 99995 5556666554 4566666664 46
Q ss_pred EEEEeCC-eEEEEeCCCCeee---ecCCCCccEEEEEEcCCCCE----EEEEecCc-EEEEEcCCC---ceeeeecCCCC
Q psy11524 181 FAVGSYN-TLRLCDKVGWSHS---LDKPDTGSVYDLVWSNDATQ----IAGACANV-IHIFDISSS---SSSNVTAPLSH 248 (323)
Q Consensus 181 l~~~~~~-~i~i~d~~~~~~~---~~~~~~~~v~~~~~~~~~~~----l~~~~~d~-i~iwd~~~~---~~~~~~~~~~~ 248 (323)
+++++.+ .+++||++..... ....+.....++++.+++.. +++++.|+ |++||++.. +.+.. +..|
T Consensus 183 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~--~~~~ 260 (368)
T 3mmy_A 183 AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT--FKCH 260 (368)
T ss_dssp EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEE--EECS
T ss_pred eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccccee--eeee
Confidence 7777775 9999998754222 22234455666766665544 99999999 999999887 33444 4555
Q ss_pred cc------------ceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecC
Q psy11524 249 SH------------EITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACAN 312 (323)
Q Consensus 249 ~~------------~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~d 312 (323)
.. .|.+++|+|++ ..+++++.++.+.+|++... ....|...|.+++|+|+|++|++++.|
T Consensus 261 ~~~~~~~~~~~~~~~v~~~~~sp~~----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 261 RSNGTNTSAPQDIYAVNGIAFHPVH----GTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp EEC----CCCEEECCEEEEEECTTT----CCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECC
T ss_pred ecccccccccccccceEEEEEecCC----CEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecc
Confidence 54 79999999998 89999999999999998875 556788999999999999999999998
Q ss_pred CeEEEEE
Q psy11524 313 GSLLLGT 319 (323)
Q Consensus 313 g~i~~~~ 319 (323)
+..+.|+
T Consensus 337 ~~~~~~~ 343 (368)
T 3mmy_A 337 DWSKGHE 343 (368)
T ss_dssp CSTTCGG
T ss_pred ccccccc
Confidence 7554443
No 94
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-31 Score=220.62 Aligned_cols=231 Identities=18% Similarity=0.197 Sum_probs=196.3
Q ss_pred ceeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEee
Q psy11524 73 SLCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKAS 149 (323)
Q Consensus 73 ~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i 149 (323)
++.+.+ .|...|++++| |++++|++++.+ +.|++|+.... ...+..|...|.+++|+|++++|++++.|+.++
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~d-g~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~-- 84 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRD-GTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMIN-- 84 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETT-SEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEE--
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcC-CcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEE--
Confidence 344445 49999999999 999999988777 69999998765 566788999999999999999999999999999
Q ss_pred eEEeCC----CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeeecCCCCccEEEEEEcC-CCCEEEE
Q psy11524 150 FVWDTD----GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSN-DATQIAG 223 (323)
Q Consensus 150 ~v~d~~----~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~ 223 (323)
+|++. .+....+..|...|.+++| +++++++++.+ .|++|| ..........|...+.+++|+| +++++++
T Consensus 85 -~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 160 (313)
T 3odt_A 85 -GVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLT 160 (313)
T ss_dssp -EEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEE
T ss_pred -EEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEE
Confidence 99984 3557778889999999999 47799999986 999999 4445566677999999999998 9999999
Q ss_pred EecCc-EEEEEcCCCceeeeecCCC-CccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEE
Q psy11524 224 ACANV-IHIFDISSSSSSNVTAPLS-HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDL 297 (323)
Q Consensus 224 ~~~d~-i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~ 297 (323)
++.|+ |++|| .++.... +.. +...+.+++|+|++ . ++++..++.+.+|++... ....|...|.++
T Consensus 161 ~~~d~~i~i~d--~~~~~~~--~~~~~~~~i~~~~~~~~~----~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~ 231 (313)
T 3odt_A 161 ASADKTIKLWQ--NDKVIKT--FSGIHNDVVRHLAVVDDG----H-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCI 231 (313)
T ss_dssp EETTSCEEEEE--TTEEEEE--ECSSCSSCEEEEEEEETT----E-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEE
T ss_pred EECCCCEEEEe--cCceEEE--EeccCcccEEEEEEcCCC----e-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEE
Confidence 99999 99999 4444554 344 88899999999997 4 888888999999998765 445678999999
Q ss_pred EEeeCCCeeEeeecCCeEEEEEee
Q psy11524 298 VWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 298 ~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
+|+|++ .|++++.||.|++|++.
T Consensus 232 ~~~~~~-~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 232 KLLPNG-DIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp EECTTS-CEEEEETTSEEEEECTT
T ss_pred EEecCC-CEEEEecCCEEEEEECC
Confidence 999999 69999999999999974
No 95
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-31 Score=223.19 Aligned_cols=238 Identities=14% Similarity=0.176 Sum_probs=194.1
Q ss_pred eEeecccceeEeeEeccCCcceeeeeecc---cccc---ccceeeec-CCCCCEEEEEEcCC--CCeEEEEeeCCeEEEE
Q psy11524 38 LTIRRYDGTVINYPISPYISVLHSYAASH---SWPQ---ALSLCRTL-NVSPPVYSAAWSPD--SNKVLLTQAKSLVIKP 108 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~-~~~~~v~~~~~sp~--~~~l~~~~~~~~~v~~ 108 (323)
..+.+|.+.|.+++|+|++..++....++ .|+. +.+....+ .|...|++++|+|+ +++|++++.+ +.|++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-g~v~i 83 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-GKVLI 83 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-SCEEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-CEEEE
Confidence 46789999999999999996655444443 2442 33333344 38999999999987 8999988777 69999
Q ss_pred eCCCCc----eeEeeccCCCeEEEEECCC--CCEEEEEcCCCceEeeeEEeCCCC---eeeEeecCCCceeEEEEec---
Q psy11524 109 LSPNNK----ATKWQAHDGLILKVAWCSS--TDLILSGGEDCKYKASFVWDTDGR---QLYSSLTHDHPISSLAWAP--- 176 (323)
Q Consensus 109 ~~~~~~----~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~i~v~d~~~~---~~~~~~~~~~~v~~~~~~p--- 176 (323)
|+.... ...+..|...|.+++|+|+ +.+|++++.|+.|+ +||+... ....+..|...|.+++|+|
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~---v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 160 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS---VVEFKENGTTSPIIIDAHAIGVNSASWAPATI 160 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE---EEECCTTSCCCEEEEECCTTCEEEEEECCCC-
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEE---EEecCCCCceeeEEecCCCCceEEEEEcCccc
Confidence 998764 4556779999999999999 99999999999999 9999633 4456678899999999999
Q ss_pred ----------CCCEEEEEeCC-eEEEEeCCCC-----eeeecCCCCccEEEEEEcCC---CCEEEEEecCc-EEEEEcCC
Q psy11524 177 ----------GGDMFAVGSYN-TLRLCDKVGW-----SHSLDKPDTGSVYDLVWSND---ATQIAGACANV-IHIFDISS 236 (323)
Q Consensus 177 ----------~~~~l~~~~~~-~i~i~d~~~~-----~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~-i~iwd~~~ 236 (323)
++.+|++++.+ .|++||++.. ....+..|...|.+++|+|+ +++|++++.|+ |++||+++
T Consensus 161 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 161 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp ---------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 69999999996 9999998642 23456779999999999999 89999999999 99999998
Q ss_pred Cc---eeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecc
Q psy11524 237 SS---SSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWS 283 (323)
Q Consensus 237 ~~---~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~ 283 (323)
++ .........+...+.+++|+|++ ..|++.+.++.+.+|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g----~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 241 EQGPWKKTLLKEEKFPDVLWRASWSLSG----NVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSS----CCEEEEESSSSEEEEEEE
T ss_pred CCccceeeeeccccCCCcEEEEEEcCCC----CEEEEecCCCcEEEEeCC
Confidence 74 22221134588899999999999 788888889999999876
No 96
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.4e-31 Score=224.68 Aligned_cols=237 Identities=9% Similarity=0.065 Sum_probs=183.0
Q ss_pred eEeecccceeEeeEeccCCcceee-------eeeccccccccceeee---------------c---CCCCCEEEEEEcCC
Q psy11524 38 LTIRRYDGTVINYPISPYISVLHS-------YAASHSWPQALSLCRT---------------L---NVSPPVYSAAWSPD 92 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~---------------~---~~~~~v~~~~~sp~ 92 (323)
..+.+|...|.++.++++. ++. .+.+++.|...++|.. . .+...+.+++||||
T Consensus 67 ~~l~~~~~~v~s~~~~~~~--~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 67 FALEDNDDSPTAIDASKGI--ILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp EECCTTSCCCCEEEEETTE--EEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EEccCCCCceEEEEeCCCE--EEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 4677888888888776542 221 1223344444444321 1 14456899999999
Q ss_pred CCeEEEEee-CCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeE--eecCCCc
Q psy11524 93 SNKVLLTQA-KSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYS--SLTHDHP 168 (323)
Q Consensus 93 ~~~l~~~~~-~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~--~~~~~~~ 168 (323)
|+++++++. .++.|++||.... ......|...|.+++|+|||+++++++.++.+. +|..+++.+.. ...|...
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~---~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEV---ISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEE---EETTTCCEEEEECCCCTTEE
T ss_pred CCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEE---EEeccCcceeeeecCCCCCC
Confidence 999987653 4579999998876 222335888999999999999999999776555 55556665543 3457788
Q ss_pred eeEEEEecCCCEEEEEeCC-----eEEEEeCCCCe-----eeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCC
Q psy11524 169 ISSLAWAPGGDMFAVGSYN-----TLRLCDKVGWS-----HSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSS 237 (323)
Q Consensus 169 v~~~~~~p~~~~l~~~~~~-----~i~i~d~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~ 237 (323)
+.+++|+|+++.+++++.+ .+++||+.... ...+.+|...|++++|+|+|++||+|+.|+ |+|||++++
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~ 301 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL 301 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC
Confidence 9999999999999988752 57888876432 234567888999999999999999999999 999999999
Q ss_pred ceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEeccc
Q psy11524 238 SSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSH 284 (323)
Q Consensus 238 ~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~ 284 (323)
+++.++ +.+|..+|++++|+|+| .+|+.++.|+.+++|++..
T Consensus 302 ~~~~~~-~~gH~~~V~~v~fSpdg----~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 302 SMSKIF-KQAHSFAITEVTISPDS----TYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEEE-TTSSSSCEEEEEECTTS----CEEEEEETTSEEEEEECCT
T ss_pred cEEEEe-cCcccCCEEEEEECCCC----CEEEEEeCCCeEEEEEcCC
Confidence 988863 57899999999999999 8999999999999999965
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.7e-31 Score=228.74 Aligned_cols=231 Identities=16% Similarity=0.247 Sum_probs=192.8
Q ss_pred CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc------eeEeeccCCCeEEEEECC-CCCEEEEEcCCCceEeeeEEeCC
Q psy11524 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK------ATKWQAHDGLILKVAWCS-STDLILSGGEDCKYKASFVWDTD 155 (323)
Q Consensus 83 ~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~i~v~d~~ 155 (323)
....++++|+...+++.+..+|.|++|+.... ...+.+|.+.|.+++|+| ++++|++++.||.|+ +||+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~---vw~~~ 112 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVM---VWEIP 112 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEE---EEECC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEE---EEEcc
Confidence 34458899888777665555579999997543 345678999999999999 899999999999999 99995
Q ss_pred C--------CeeeEeecCCCceeEEEEecCC-CEEEEEeCC-eEEEEeCCCC-eeeec--CCCCccEEEEEEcCCCCEEE
Q psy11524 156 G--------RQLYSSLTHDHPISSLAWAPGG-DMFAVGSYN-TLRLCDKVGW-SHSLD--KPDTGSVYDLVWSNDATQIA 222 (323)
Q Consensus 156 ~--------~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~~-~i~i~d~~~~-~~~~~--~~~~~~v~~~~~~~~~~~l~ 222 (323)
. +.+..+.+|...|.+++|+|++ ++|++++.| .|++||++.. ....+ ..|...|.+++|+|++++|+
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 192 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALIC 192 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEE
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEE
Confidence 3 5677888999999999999998 689999986 9999998855 44455 67999999999999999999
Q ss_pred EEecCc-EEEEEcCCCceeeeecC-CCCccc-eEEEEEccCCCCccceEEEE---eCCCCeEEEecccc------cCCCC
Q psy11524 223 GACANV-IHIFDISSSSSSNVTAP-LSHSHE-ITQLAVNQTGSLQERHVAFI---DKNRDLYLSMWSHS------LDKPD 290 (323)
Q Consensus 223 ~~~~d~-i~iwd~~~~~~~~~~~~-~~~~~~-v~~~~~~p~g~~~d~~l~~~---~~~~~~~~~~~~~~------~~~~~ 290 (323)
+++.|+ |++||+++++.+.. + ..|... +..++|+|++ ..++++ ..++.+.+|++... ....|
T Consensus 193 ~~~~d~~i~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~~~----~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 266 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRKGTVVAE--KDRPHEGTRPVHAVFVSEG----KILTTGFSRMSERQVALWDTKHLEEPLSLQELDT 266 (402)
T ss_dssp EEETTSEEEEEETTTTEEEEE--EECSSCSSSCCEEEECSTT----EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCC
T ss_pred EEecCCcEEEEeCCCCceeee--eccCCCCCcceEEEEcCCC----cEEEEeccCCCCceEEEEcCccccCCceEEeccC
Confidence 999999 99999999998887 4 566655 8999999998 778777 67888999998764 11135
Q ss_pred ccceeEEEEeeCCCeeE-eeecCCeEEEEEeec
Q psy11524 291 TGSVYDLVWSSDATQIA-GACANGSLLLGTIIQ 322 (323)
Q Consensus 291 ~~~v~~~~~s~~g~~l~-s~~~dg~i~~~~l~~ 322 (323)
...+.+++|+|++++|+ +++.||.|++|++.+
T Consensus 267 ~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 267 SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp CSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 67899999999999987 555799999999864
No 98
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=4.2e-32 Score=229.14 Aligned_cols=234 Identities=12% Similarity=0.111 Sum_probs=192.8
Q ss_pred CCCCCEEEEEEcCC----CCeEEEEeeCCeEEEEeCCCCc--eeEeec-----cCCCeEEEEECCC----CCEEEEEcCC
Q psy11524 79 NVSPPVYSAAWSPD----SNKVLLTQAKSLVIKPLSPNNK--ATKWQA-----HDGLILKVAWCSS----TDLILSGGED 143 (323)
Q Consensus 79 ~~~~~v~~~~~sp~----~~~l~~~~~~~~~v~~~~~~~~--~~~~~~-----~~~~v~~~~~~~~----~~~l~~~~~d 143 (323)
.|..+|++++|+|+ ...+++++.++ .|++|+.... ...+.. |...|.+++|+|+ +++|++++.|
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~-~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSN-RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETT-EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCC-EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 48999999999994 44566565664 8999998744 334432 5678999999998 6799999999
Q ss_pred CceEeeeEEeCC-CCeeeEeecCCCceeEEEEec-CCCEEEEEeCC-eEEEEeCCCC-eeeec---CCCCccEEEEEEcC
Q psy11524 144 CKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAP-GGDMFAVGSYN-TLRLCDKVGW-SHSLD---KPDTGSVYDLVWSN 216 (323)
Q Consensus 144 ~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~~-~i~i~d~~~~-~~~~~---~~~~~~v~~~~~~~ 216 (323)
|.|+ +||+. ++.+..+..|...|.+++|+| ++++|++++.| .|++||++.. ....+ ..|...|.+++|+|
T Consensus 95 g~i~---v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 95 GIIR---IINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp CEEE---EECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred CEEE---EEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 9999 99995 777788888999999999999 89999999996 9999998855 34444 57999999999999
Q ss_pred CCCEEEEEecCc-EEEEEcCCCceeeeec--------------------------CCCCccceEEEEEccCCCCccceEE
Q psy11524 217 DATQIAGACANV-IHIFDISSSSSSNVTA--------------------------PLSHSHEITQLAVNQTGSLQERHVA 269 (323)
Q Consensus 217 ~~~~l~~~~~d~-i~iwd~~~~~~~~~~~--------------------------~~~~~~~v~~~~~~p~g~~~d~~l~ 269 (323)
++++|++++.|+ |++||+++++....+. ...|...|.+++|+ + ..++
T Consensus 172 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~----~~l~ 245 (366)
T 3k26_A 172 LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--G----DLIL 245 (366)
T ss_dssp TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--T----TEEE
T ss_pred CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--C----CEEE
Confidence 999999999999 9999998876543210 22388899999998 4 6888
Q ss_pred EEeCCCCeEEEecccc------------------cCCCCccceeEEEEeeC--CCeeEeeecCCeEEEEEeec
Q psy11524 270 FIDKNRDLYLSMWSHS------------------LDKPDTGSVYDLVWSSD--ATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 270 ~~~~~~~~~~~~~~~~------------------~~~~~~~~v~~~~~s~~--g~~l~s~~~dg~i~~~~l~~ 322 (323)
+.+.++.+.+|++... ....|...|.+++|+|+ +++|++++.||.|++|++..
T Consensus 246 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 246 SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCS
T ss_pred EEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCC
Confidence 8888899999987653 22345678999999999 99999999999999999853
No 99
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.4e-30 Score=218.01 Aligned_cols=237 Identities=14% Similarity=0.157 Sum_probs=191.1
Q ss_pred eEeecccceeEeeEeccCCcceeeeeecc---cccccc-----ceeeec-CCCCCEEEEEEcC--CCCeEEEEeeCCeEE
Q psy11524 38 LTIRRYDGTVINYPISPYISVLHSYAASH---SWPQAL-----SLCRTL-NVSPPVYSAAWSP--DSNKVLLTQAKSLVI 106 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~~-~~~~~v~~~~~sp--~~~~l~~~~~~~~~v 106 (323)
..+.+|.+.|.++.|+|++..++....++ .|+... ++...+ .|...|++++|+| ++++|++++.+ +.|
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-g~v 83 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-KTV 83 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-SCE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-CeE
Confidence 35679999999999999996555544443 244211 122333 4899999999999 69999988777 599
Q ss_pred EEeCCCCc-----------eeEeeccCCCeEEEEECCC--CCEEEEEcCCCceEeeeEEeCC-CCeeeEe----------
Q psy11524 107 KPLSPNNK-----------ATKWQAHDGLILKVAWCSS--TDLILSGGEDCKYKASFVWDTD-GRQLYSS---------- 162 (323)
Q Consensus 107 ~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~---------- 162 (323)
++|+.... ...+..|...|.+++|+|+ +++|++++.|+.|+ +||++ ++.+..+
T Consensus 84 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~---iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 84 KLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILR---LYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp EEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEE---EEECSSTTCTTCCEEEEEEESCS
T ss_pred EEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEE---EecCCChHHhccccccccccccc
Confidence 99997653 5567789999999999999 99999999999999 99985 3322222
Q ss_pred ---ecCCCceeEEEEecC---CCEEEEEeCC-eEEEEeCCCCe---eeecCCCCccEEEEEEcCCC----CEEEEEecCc
Q psy11524 163 ---LTHDHPISSLAWAPG---GDMFAVGSYN-TLRLCDKVGWS---HSLDKPDTGSVYDLVWSNDA----TQIAGACANV 228 (323)
Q Consensus 163 ---~~~~~~v~~~~~~p~---~~~l~~~~~~-~i~i~d~~~~~---~~~~~~~~~~v~~~~~~~~~----~~l~~~~~d~ 228 (323)
..+...+.+++|+|+ +..+++++.+ .+.+|+..... ...+.+|...|.+++|+|++ ++|++++.|+
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg 240 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG 240 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC
Confidence 156778999999997 8999999997 77677665443 45677799999999999998 8999999999
Q ss_pred -EEEEEcCCC----------------------------------------------ceeeeecCCCCccceEEEEEccCC
Q psy11524 229 -IHIFDISSS----------------------------------------------SSSNVTAPLSHSHEITQLAVNQTG 261 (323)
Q Consensus 229 -i~iwd~~~~----------------------------------------------~~~~~~~~~~~~~~v~~~~~~p~g 261 (323)
|++||++.+ +.+.. +.+|...|++++|+|++
T Consensus 241 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~s~~~ 318 (351)
T 3f3f_A 241 RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE--HDDHNGEVWSVSWNLTG 318 (351)
T ss_dssp CEEEEEEEECC---------------------------------------CCSEEEEEEEE--ECTTSSCEEEEEECSSS
T ss_pred eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEE--EecccccEEEEEEcCCC
Confidence 999998865 34444 57899999999999998
Q ss_pred CCccceEEEEeCCCCeEEEeccc
Q psy11524 262 SLQERHVAFIDKNRDLYLSMWSH 284 (323)
Q Consensus 262 ~~~d~~l~~~~~~~~~~~~~~~~ 284 (323)
..|++++.++.+.+|++..
T Consensus 319 ----~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 319 ----TILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp ----CCEEEEETTSCEEEEEECT
T ss_pred ----CEEEEecCCCcEEEEecCc
Confidence 8999999999999999986
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.7e-30 Score=224.80 Aligned_cols=259 Identities=12% Similarity=0.176 Sum_probs=208.2
Q ss_pred eecccceeEeeEeccCCcceeeeeecc---ccc-cccceeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc
Q psy11524 40 IRRYDGTVINYPISPYISVLHSYAASH---SWP-QALSLCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK 114 (323)
Q Consensus 40 ~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~ 114 (323)
..+|...|.++.+ ++..++....++ .|| .+.+....+ .|...|.+++| ++++|++|+.+ +.|++|+....
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~d-g~i~vwd~~~~ 203 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSD-STVRVWDVNTG 203 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETT-SCEEEEESSSC
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCC-CeEEEEECCCC
Confidence 3456677888877 664444433333 244 223333444 38999999999 78899988777 69999998765
Q ss_pred --eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCC-Cee---eEeecCCCceeEEEEecCCCEEEEEeCC-
Q psy11524 115 --ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG-RQL---YSSLTHDHPISSLAWAPGGDMFAVGSYN- 187 (323)
Q Consensus 115 --~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~-~~~---~~~~~~~~~v~~~~~~p~~~~l~~~~~~- 187 (323)
...+..|...|.+++|++ ..+++++.||.|+ +||++. ... ..+.+|...|.+++| +++++++++.|
T Consensus 204 ~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~---vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg 276 (435)
T 1p22_A 204 EMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIA---VWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDR 276 (435)
T ss_dssp CEEEEECCCCSCEEEEECCT--TEEEEEETTSCEE---EEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTS
T ss_pred cEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEE---EEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCC
Confidence 667889999999999974 5999999999999 999963 333 566789999999999 68899999996
Q ss_pred eEEEEeCCC-CeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCcc
Q psy11524 188 TLRLCDKVG-WSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQE 265 (323)
Q Consensus 188 ~i~i~d~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d 265 (323)
.|++||+++ .....+..|...+.+++++ ++++++++.|+ |++||+++++.+.+ +.+|...|.+++| ++
T Consensus 277 ~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~--~~~h~~~v~~~~~--~~---- 346 (435)
T 1p22_A 277 TIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRV--LEGHEELVRCIRF--DN---- 346 (435)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEE--ECCCSSCEEEEEC--CS----
T ss_pred eEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEE--EeCCcCcEEEEEe--cC----
Confidence 999999875 4566777899999999994 67999999999 99999999999988 7889999999999 45
Q ss_pred ceEEEEeCCCCeEEEecccc-------------cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 266 RHVAFIDKNRDLYLSMWSHS-------------LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 266 ~~l~~~~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
..+++++.++.+.+|++... ....|...|.+++| ++++|++++.||.|++|++.+
T Consensus 347 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 347 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC---
T ss_pred CEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCC
Confidence 78999999999999998542 34567889999999 788999999999999999854
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-30 Score=225.20 Aligned_cols=232 Identities=7% Similarity=-0.010 Sum_probs=183.1
Q ss_pred CCCCEEEEEEcCCCCeE-EEEeeCCeEEEEeCCC--Cc--eeEee--ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEE
Q psy11524 80 VSPPVYSAAWSPDSNKV-LLTQAKSLVIKPLSPN--NK--ATKWQ--AHDGLILKVAWCSSTDLILSGGEDCKYKASFVW 152 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l-~~~~~~~~~v~~~~~~--~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~ 152 (323)
|...|.+++|+|++++| ++++.+ +.|++|+.. .. ...+. .|...|.+++|+|++++|++++.+|.++ +|
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~d-g~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~---~~ 176 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSD-KSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVY---SI 176 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGG-TEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEE---EE
T ss_pred cCCceEEEEEcCCCCEEEEEECCC-CeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEE---EE
Confidence 34479999999999997 555455 699999977 43 44444 6778999999999999999999999999 99
Q ss_pred eCC-CC----eeeEeecCCCceeEEEEecC---CCEEEEEeCC-eEEEEeCCCC-eeee-cCCCCccEEEEEEcCCCCEE
Q psy11524 153 DTD-GR----QLYSSLTHDHPISSLAWAPG---GDMFAVGSYN-TLRLCDKVGW-SHSL-DKPDTGSVYDLVWSNDATQI 221 (323)
Q Consensus 153 d~~-~~----~~~~~~~~~~~v~~~~~~p~---~~~l~~~~~~-~i~i~d~~~~-~~~~-~~~~~~~v~~~~~~~~~~~l 221 (323)
++. ++ ....+.+|...|.+++|+|+ +++|++++.| .|++||++.. .... ..+|...|.+++|+ ++++|
T Consensus 177 ~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 177 DINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp ETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEE
T ss_pred ecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEE
Confidence 985 33 22367789999999999999 9999999997 9999998743 4443 66899999999999 99999
Q ss_pred EEEecCc-EEEEEcCCCceeeeecCC-----------------------CCccceEEEEEccCCCCccceEEEEe-CCCC
Q psy11524 222 AGACANV-IHIFDISSSSSSNVTAPL-----------------------SHSHEITQLAVNQTGSLQERHVAFID-KNRD 276 (323)
Q Consensus 222 ~~~~~d~-i~iwd~~~~~~~~~~~~~-----------------------~~~~~v~~~~~~p~g~~~d~~l~~~~-~~~~ 276 (323)
++++.|+ |++||+++++.+..+... .....+.+++|+|++ ..+++.. .++.
T Consensus 256 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~----~~l~~~~~~d~~ 331 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL----PFVAFFVEATKC 331 (450)
T ss_dssp EEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS----SEEEEEETTCSE
T ss_pred EEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC----CEEEEEECCCCe
Confidence 9999999 999999999887763211 233578999999998 7777777 7788
Q ss_pred eEEEec--ccc-------cCCCCccceeEEEEeeCCCeeEeeec------CCeEEEEEee
Q psy11524 277 LYLSMW--SHS-------LDKPDTGSVYDLVWSSDATQIAGACA------NGSLLLGTII 321 (323)
Q Consensus 277 ~~~~~~--~~~-------~~~~~~~~v~~~~~s~~g~~l~s~~~------dg~i~~~~l~ 321 (323)
+.+|++ ... ....| ..|.+++|+|++.++++++. +..|.+|.+.
T Consensus 332 i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 332 IIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp EEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred EEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 888888 221 23344 78999999996544444443 5568888874
No 102
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=8.6e-30 Score=222.20 Aligned_cols=266 Identities=15% Similarity=0.115 Sum_probs=209.3
Q ss_pred eeeEeecccceeEeeEeccCCcceeeeeecc---ccc-cccceeeecC-CCCCEEEEEEc--CCCCeEEEEeeCCeEEEE
Q psy11524 36 NHLTIRRYDGTVINYPISPYISVLHSYAASH---SWP-QALSLCRTLN-VSPPVYSAAWS--PDSNKVLLTQAKSLVIKP 108 (323)
Q Consensus 36 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~-~~~~v~~~~~s--p~~~~l~~~~~~~~~v~~ 108 (323)
....+.+|.+.|.++.|+|++ .++....++ .|| .+.+....+. |...|.+++|+ ++++++++++.+ +.|++
T Consensus 154 ~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d-~~i~v 231 (464)
T 3v7d_B 154 FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRD-NTLHV 231 (464)
T ss_dssp EEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETT-SCEEE
T ss_pred EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCC-CcEEE
Confidence 345678999999999999988 333333222 244 2233334443 89999999998 577888888777 69999
Q ss_pred eCCCCc-------------------------eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEe
Q psy11524 109 LSPNNK-------------------------ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSS 162 (323)
Q Consensus 109 ~~~~~~-------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~ 162 (323)
|+.... ...+.+|...+.++ +++++++++++.|+.|+ +||+. ++.+..+
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~---vwd~~~~~~~~~~ 306 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLI---VWDVAQMKCLYIL 306 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEE---EEETTTTEEEEEE
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEE---EEECCCCcEEEEe
Confidence 997654 22456788888876 57789999999999999 99995 6677788
Q ss_pred ecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCC-CeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCce
Q psy11524 163 LTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVG-WSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSS 239 (323)
Q Consensus 163 ~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~ 239 (323)
.+|...|.+++|+|+++++++++.| .|++||+++ .....+.+|...|.+++|+ +++|++++.|+ |++||+++++.
T Consensus 307 ~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~ 384 (464)
T 3v7d_B 307 SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR 384 (464)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce
Confidence 8899999999999999999999996 999999874 4666778899999999998 57999999999 99999998877
Q ss_pred eeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-----cCCCCccceeEEEEeeCCCeeEeeecCCe
Q psy11524 240 SNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-----LDKPDTGSVYDLVWSSDATQIAGACANGS 314 (323)
Q Consensus 240 ~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~ 314 (323)
... ..+...+..++|+|++ ..+++++ ++.+.+|++..+ ....|...|.+++|+ +...+++++.||.
T Consensus 385 ~~~---~~~~~~~~~~~~~~~~----~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~ 455 (464)
T 3v7d_B 385 KFS---YHHTNLSAITTFYVSD----NILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQ 455 (464)
T ss_dssp EEE---EECTTCCCEEEEEECS----SEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTE
T ss_pred eee---ecCCCCccEEEEEeCC----CEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCe
Confidence 665 2456678888999998 7777777 888999998775 245578999999997 3445556667776
Q ss_pred EEEEE
Q psy11524 315 LLLGT 319 (323)
Q Consensus 315 i~~~~ 319 (323)
+.+|-
T Consensus 456 ~~i~~ 460 (464)
T 3v7d_B 456 SFLEI 460 (464)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65553
No 103
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5e-30 Score=219.59 Aligned_cols=226 Identities=15% Similarity=0.232 Sum_probs=186.8
Q ss_pred CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEee-ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCe
Q psy11524 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQ-AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQ 158 (323)
Q Consensus 83 ~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~ 158 (323)
.+.+++|++ ..+++++.+ +.|++|+.... ...+. .|...|.+++|+|++++|++++.||.|+ +||+. ++.
T Consensus 95 ~~~~~~~s~--~~l~~~~~d-~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~---iwd~~~~~~ 168 (401)
T 4aez_A 95 YLNLLDWSN--LNVVAVALE-RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVD---IYDVESQTK 168 (401)
T ss_dssp TCBCEEECT--TSEEEEEET-TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEE---EEETTTCCE
T ss_pred eEEEEeecC--CCEEEEECC-CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEE---EEECcCCeE
Confidence 455677765 557777777 59999998765 33333 3789999999999999999999999999 99995 677
Q ss_pred eeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCC--CCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEc
Q psy11524 159 LYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKV--GWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDI 234 (323)
Q Consensus 159 ~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~ 234 (323)
+..+..|...|.+++|+ ++++++++.+ .|++||++ ......+..|...|.+++|+|++++|++++.|+ |++||+
T Consensus 169 ~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~ 246 (401)
T 4aez_A 169 LRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDA 246 (401)
T ss_dssp EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccC
Confidence 88888999999999995 6799999996 99999987 335567778999999999999999999999999 999999
Q ss_pred CCCceeeeecCCCCccceEEEEEccCCCCccceEEEEe--CCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEe
Q psy11524 235 SSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFID--KNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAG 308 (323)
Q Consensus 235 ~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~--~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s 308 (323)
++++.+.. +..|...|.+++|+|++. ..+++++ .++.+.+|++... ... +...|.+++|+|++++|++
T Consensus 247 ~~~~~~~~--~~~~~~~v~~~~~~p~~~---~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~ 320 (401)
T 4aez_A 247 RSSIPKFT--KTNHNAAVKAVAWCPWQS---NLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMS 320 (401)
T ss_dssp TCSSEEEE--ECCCSSCCCEEEECTTST---TEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEE
T ss_pred CCCCccEE--ecCCcceEEEEEECCCCC---CEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEE
Confidence 99998887 678999999999999873 4444443 5777777776654 111 3678999999999999998
Q ss_pred --eecCCeEEEEEeec
Q psy11524 309 --ACANGSLLLGTIIQ 322 (323)
Q Consensus 309 --~~~dg~i~~~~l~~ 322 (323)
|+.||.|++|++..
T Consensus 321 ~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 321 THGFPDNNLSIWSYSS 336 (401)
T ss_dssp EECTTTCEEEEEEEET
T ss_pred EeecCCCcEEEEecCC
Confidence 44899999999854
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=5.1e-30 Score=215.84 Aligned_cols=265 Identities=9% Similarity=0.052 Sum_probs=195.6
Q ss_pred EeecccceeEeeEeccCCcceeeeeecc--cccc-ccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-
Q psy11524 39 TIRRYDGTVINYPISPYISVLHSYAASH--SWPQ-ALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK- 114 (323)
Q Consensus 39 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~- 114 (323)
..+.|...|.+++|+|||..++....++ .|+. +.+..... +...+..+++.++++.++.++..++.|++||....
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~ 92 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQ-EMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQ 92 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEE-ECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTE
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeee-ecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCc
Confidence 4578999999999999996555433322 2431 11111111 22358889999999988766555569999998765
Q ss_pred -eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCC--CeeeEeecCCCceeEEEEecCCCEEEEE--eCC-e
Q psy11524 115 -ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG--RQLYSSLTHDHPISSLAWAPGGDMFAVG--SYN-T 188 (323)
Q Consensus 115 -~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~--~~~~~~~~~~~~v~~~~~~p~~~~l~~~--~~~-~ 188 (323)
+..+ .+...|.+++|+++. ++++ .++.|+ +||+.. +.+..+.. +...+++++ .+++++ +.+ .
T Consensus 93 ~~~~~-~~~~~v~~v~~~~~~--~~~~-~~~~i~---i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~ 160 (355)
T 3vu4_A 93 DVSRI-KVDAPVKDLFLSREF--IVVS-YGDVIS---VFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQ 160 (355)
T ss_dssp EEEEE-ECSSCEEEEEECSSE--EEEE-ETTEEE---EEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTC
T ss_pred EEEEE-ECCCceEEEEEcCCE--EEEE-EcCEEE---EEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcE
Confidence 3444 477899999999864 4433 378899 999964 45555544 445567777 567664 445 9
Q ss_pred EEEEeCCCCe-----------------eeecCCCCccEEEEEEcCCCCEEEEEecCc--EEEEEcCCCceeeeecCC-C-
Q psy11524 189 LRLCDKVGWS-----------------HSLDKPDTGSVYDLVWSNDATQIAGACANV--IHIFDISSSSSSNVTAPL-S- 247 (323)
Q Consensus 189 i~i~d~~~~~-----------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--i~iwd~~~~~~~~~~~~~-~- 247 (323)
|++||++... ...+.+|...|.+++|+|+|++|++++.|+ |++||+++++.+.+ +. +
T Consensus 161 v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~--~~~g~ 238 (355)
T 3vu4_A 161 IHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE--FRRGL 238 (355)
T ss_dssp EEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE--EECTT
T ss_pred EEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE--EEcCC
Confidence 9999988543 567788999999999999999999999998 99999999999988 44 4
Q ss_pred CccceEEEEEccCCCCccceEEEEeCCCCeEEEecccccC---------------------------CCCccceeEEEEe
Q psy11524 248 HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSLD---------------------------KPDTGSVYDLVWS 300 (323)
Q Consensus 248 ~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~v~~~~~s 300 (323)
|...|.+++|+|++ ..+++++.++.+++|++..... ..+......++|+
T Consensus 239 h~~~v~~~~~s~~~----~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 314 (355)
T 3vu4_A 239 DRADVVDMKWSTDG----SKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWI 314 (355)
T ss_dssp CCSCEEEEEECTTS----CEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEES
T ss_pred CCCcEEEEEECCCC----CEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEe
Confidence 88999999999999 8899999999999999865310 0011223679999
Q ss_pred eCCCeeEeeecCCeEEEEEeec
Q psy11524 301 SDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 301 ~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
|+|+.|++++.||.+++|++.+
T Consensus 315 ~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 315 SESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp SSSEEEEEETTTTEEEEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEEEEc
Confidence 9999999999999999999753
No 105
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2e-29 Score=218.77 Aligned_cols=261 Identities=18% Similarity=0.176 Sum_probs=213.4
Q ss_pred eeeEeecccceeEeeEeccCCcceeeeeecccccccccee--------eec-CCCCCEEEEEEcCCCCeEEEEeeCCeEE
Q psy11524 36 NHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLC--------RTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVI 106 (323)
Q Consensus 36 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v 106 (323)
....+.+|.+.|.++.++++ .+++++.|++.++| ..+ .|...|.+++|+ ++.+++++.+ +.|
T Consensus 151 ~~~~~~~h~~~v~~~~~~~~------~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~d-g~i 221 (445)
T 2ovr_B 151 CLRTLVGHTGGVWSSQMRDN------IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRD-ATL 221 (445)
T ss_dssp EEEECCCCSSCEEEEEEETT------EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETT-SEE
T ss_pred EEEEEcCCCCCEEEEEecCC------EEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCC-CEE
Confidence 34567889999999999842 34444444443333 334 389999999996 5678888777 699
Q ss_pred EEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEE
Q psy11524 107 KPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAV 183 (323)
Q Consensus 107 ~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~ 183 (323)
++|+.... ...+..|...|.+++| +++++++++.||.|+ +||++ ++.+..+..|...+.+++| ++.++++
T Consensus 222 ~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~---iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~ 294 (445)
T 2ovr_B 222 RVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK---VWDPETETCLHTLQGHTNRVYSLQF--DGIHVVS 294 (445)
T ss_dssp EEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEE---EEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEE
T ss_pred EEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEE---EEECCCCcEeEEecCCCCceEEEEE--CCCEEEE
Confidence 99998765 6678899999999999 688999999999999 99995 6677788889999999999 7889999
Q ss_pred EeCC-eEEEEeCCC-CeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCC---CccceEEEEE
Q psy11524 184 GSYN-TLRLCDKVG-WSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLS---HSHEITQLAV 257 (323)
Q Consensus 184 ~~~~-~i~i~d~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~---~~~~v~~~~~ 257 (323)
++.| .|++||++. .....+..|...+.++.++ ++++++++.|+ |++||+++++.+.. +.. |...|.+++|
T Consensus 295 ~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~--~~~~~~~~~~v~~~~~ 370 (445)
T 2ovr_B 295 GSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQT--LQGPNKHQSAVTCLQF 370 (445)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEE--ECSTTSCSSCEEEEEE
T ss_pred EeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEE--EccCCCCCCCEEEEEE
Confidence 9986 999999874 4566777888889888875 56999999999 99999999998887 443 7889999999
Q ss_pred ccCCCCccceEEEEeCCCCeEEEecccc-----c----CCCCccceeEEEEeeCCCeeEeeecCCe----EEEEEeec
Q psy11524 258 NQTGSLQERHVAFIDKNRDLYLSMWSHS-----L----DKPDTGSVYDLVWSSDATQIAGACANGS----LLLGTIIQ 322 (323)
Q Consensus 258 ~p~g~~~d~~l~~~~~~~~~~~~~~~~~-----~----~~~~~~~v~~~~~s~~g~~l~s~~~dg~----i~~~~l~~ 322 (323)
++ ..+++++.++.+.+|++..+ + ...|.+.|.+++|+|++.+|++|+.||+ |.+|++..
T Consensus 371 ~~------~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 371 NK------NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp CS------SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CC------CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 64 57888888888888888764 1 1346788999999999999999999998 99999853
No 106
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.98 E-value=3.4e-29 Score=217.32 Aligned_cols=263 Identities=14% Similarity=0.222 Sum_probs=212.1
Q ss_pred eeeEeecccceeEeeEeccCCcceeeeeecc---ccc-cccceeeecC-CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeC
Q psy11524 36 NHLTIRRYDGTVINYPISPYISVLHSYAASH---SWP-QALSLCRTLN-VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLS 110 (323)
Q Consensus 36 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~ 110 (323)
....+.+|.+.+.. .+++++..++....++ .|+ .+.+....+. |...|.+++|+ ++.+++++.+ +.|++|+
T Consensus 110 ~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~d-g~i~vwd 185 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTD-RTLKVWN 185 (445)
T ss_dssp CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETT-SCEEEEE
T ss_pred eeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCC-CeEEEEE
Confidence 44678899887644 3555675444433333 244 2333334443 89999999998 5688888776 6999999
Q ss_pred CCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeCC
Q psy11524 111 PNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN 187 (323)
Q Consensus 111 ~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~ 187 (323)
.... ...+..|...|.++.|+ ++.+++++.||.|+ +||+. ++.+..+..|...+.+++| +++++++++.+
T Consensus 186 ~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~---~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d 258 (445)
T 2ovr_B 186 AETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLR---VWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD 258 (445)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEE---EEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT
T ss_pred CCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEE---EEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC
Confidence 8765 66788999999999995 56899999999999 99995 7778888899999999999 68899999986
Q ss_pred -eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCc
Q psy11524 188 -TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQ 264 (323)
Q Consensus 188 -~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~ 264 (323)
.|++||++.. ....+..|...+.+++| ++.++++++.|+ |++||+++++.+.. +.+|...+.++.++ +
T Consensus 259 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~--~--- 329 (445)
T 2ovr_B 259 FMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHT--LTGHQSLTSGMELK--D--- 329 (445)
T ss_dssp SCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEE--ECCCCSCEEEEEEE--T---
T ss_pred CEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEE--EcCCcccEEEEEEe--C---
Confidence 9999998754 55677789999999999 788999999999 99999999999888 68888899888875 4
Q ss_pred cceEEEEeCCCCeEEEecccc----cCC---CCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 265 ERHVAFIDKNRDLYLSMWSHS----LDK---PDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 265 d~~l~~~~~~~~~~~~~~~~~----~~~---~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
+.+++++.++.+.+|++... ... .|...|.+++|+ +++|++++.||.|++|++.
T Consensus 330 -~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 330 -NILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp -TEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETT
T ss_pred -CEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECC
Confidence 68888899999999998664 222 378899999995 6799999999999999974
No 107
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=1.6e-29 Score=213.27 Aligned_cols=243 Identities=15% Similarity=0.175 Sum_probs=191.4
Q ss_pred ceeeec-CCCCCEEEEEEcCC---CCeEEEEeeCCeEEEEeCCCC-c---eeEeeccCCCeEEEEECCCCCEEEEEcCCC
Q psy11524 73 SLCRTL-NVSPPVYSAAWSPD---SNKVLLTQAKSLVIKPLSPNN-K---ATKWQAHDGLILKVAWCSSTDLILSGGEDC 144 (323)
Q Consensus 73 ~~~~~~-~~~~~v~~~~~sp~---~~~l~~~~~~~~~v~~~~~~~-~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 144 (323)
+..+.+ .|.+.|++++|+|+ |++|++++.+ +.|++|+... . ...+..|...|.+++|+|++++|++++.||
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWA-NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETT-SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCC-CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCC
Confidence 334444 48999999999999 5899988777 6999999875 2 256788999999999999999999999999
Q ss_pred ceEeeeEEeCCCCeeeEeecCCCceeEEEE--ecCCCEEEEEeCC-eEEEEeCCCC-eeeecCCCCccEEEEEEcCCCCE
Q psy11524 145 KYKASFVWDTDGRQLYSSLTHDHPISSLAW--APGGDMFAVGSYN-TLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDATQ 220 (323)
Q Consensus 145 ~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~--~p~~~~l~~~~~~-~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~ 220 (323)
.|+ +||++......+..|...|.+++| +|++++|++++.| .|++||++.. ....+. ....+.++.+.++ .
T Consensus 109 ~v~---iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~--~ 182 (368)
T 3mmy_A 109 TAK---MWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQ-LPERCYCADVIYP--M 182 (368)
T ss_dssp EEE---EEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEE-CSSCEEEEEEETT--E
T ss_pred cEE---EEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEe-cCCCceEEEecCC--e
Confidence 999 999987777778889999999999 8899999999986 9999998754 344443 3346777777654 7
Q ss_pred EEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-------cCCCCcc
Q psy11524 221 IAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-------LDKPDTG 292 (323)
Q Consensus 221 l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-------~~~~~~~ 292 (323)
+++++.++ +.+||++............+......+++.++.......+++++.++.+.+|++... ....|..
T Consensus 183 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 262 (368)
T 3mmy_A 183 AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRS 262 (368)
T ss_dssp EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEE
T ss_pred eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeec
Confidence 88888899 999999876544432233445566667766655211223888899999999988763 2334444
Q ss_pred ------------ceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 293 ------------SVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 293 ------------~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
.|.+++|+|++++|++++.||.|++|++.+
T Consensus 263 ~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~ 304 (368)
T 3mmy_A 263 NGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA 304 (368)
T ss_dssp C----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT
T ss_pred ccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC
Confidence 799999999999999999999999999753
No 108
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=3.3e-31 Score=226.17 Aligned_cols=235 Identities=13% Similarity=0.166 Sum_probs=162.5
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-------eeEeeccCCCeEEEEECC--------CCCEEEEEcCCC
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-------ATKWQAHDGLILKVAWCS--------STDLILSGGEDC 144 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-------~~~~~~~~~~v~~~~~~~--------~~~~l~~~~~d~ 144 (323)
|........+++++.+|++++.| +.|++|+.... ...+.+|.+.|.+++|+| |+++||+++.|+
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d-~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQD-NTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ---------CCEEEEEEEEEETT-SCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred cCCCcceeecCCCCCEEEEEeCC-CcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 44445555566677788888777 59999997665 123578999999999998 789999999999
Q ss_pred ceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCC-CEEEEEeCC-eEEEEeCCCCeee---------------------
Q psy11524 145 KYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGG-DMFAVGSYN-TLRLCDKVGWSHS--------------------- 200 (323)
Q Consensus 145 ~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~~-~i~i~d~~~~~~~--------------------- 200 (323)
+|+ +||++ +.++..+..|..++.+++|+|++ .+|++++.| +|++||++.....
T Consensus 167 tv~---~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 167 TLI---IWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp EEE---EEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred eEE---EEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 999 99994 66777788899999999999987 478999986 9999998643211
Q ss_pred -----ecCCCCccEEEEEEc-CCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCC-----------
Q psy11524 201 -----LDKPDTGSVYDLVWS-NDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGS----------- 262 (323)
Q Consensus 201 -----~~~~~~~~v~~~~~~-~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~----------- 262 (323)
...+|...+.++.|+ |+|+.|++++.|+ +++||+..++.... +..+...+..+.+.|+.+
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNE--ISDSTMKLGPKNLLPNVQGISLFPSLLGA 321 (393)
T ss_dssp GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC---------------------CCSCSEEEECSSCCSSCC
T ss_pred ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCce--EeeecCccccEEEccccccccccCcceeE
Confidence 123466778899987 7999999999999 99999998876665 455655565555555432
Q ss_pred ----Cccc-eEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 263 ----LQER-HVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 263 ----~~d~-~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
..++ .++.++.++.+++|+.... ....|..+|.+++|||||++||+++++| +.+|+|.
T Consensus 322 ~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 322 CPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp EECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred EEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 1123 4455677889999998765 2234678999999999999999998766 6666664
No 109
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.5e-29 Score=217.50 Aligned_cols=191 Identities=11% Similarity=0.043 Sum_probs=160.0
Q ss_pred cCCCeEEEEECCCCCEE-EEEcCCCceEeeeEEeCC---CCeeeEee--cCCCceeEEEEecCCCEEEEEeCC-eEEEEe
Q psy11524 121 HDGLILKVAWCSSTDLI-LSGGEDCKYKASFVWDTD---GRQLYSSL--THDHPISSLAWAPGGDMFAVGSYN-TLRLCD 193 (323)
Q Consensus 121 ~~~~v~~~~~~~~~~~l-~~~~~d~~i~~i~v~d~~---~~~~~~~~--~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d 193 (323)
|.+.|.+++|+|++++| ++++.||.|+ +||+. ++.+..+. .+...|.+++|+|++++|++++.+ .+++|+
T Consensus 101 ~~~~v~~~~~s~d~~~l~~~~~~dg~v~---iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 101 IYSYIRNLRLTSDESRLIACADSDKSLL---VFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp CCCCEEEEEECTTSSEEEEEEGGGTEEE---EEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCceEEEEEcCCCCEEEEEECCCCeEE---EEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 44479999999999996 8999999999 99986 44555554 567889999999999999999995 999999
Q ss_pred CCCCe-e----eecCCCCccEEEEEEcCC---CCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCc
Q psy11524 194 KVGWS-H----SLDKPDTGSVYDLVWSND---ATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQ 264 (323)
Q Consensus 194 ~~~~~-~----~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~ 264 (323)
+.... . ..+.+|...|.+++|+|+ +++|++++.|+ |++||+++++.+..+ +.+|...|.+++|+ ++
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~-~~~h~~~v~~~~~s-d~--- 252 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKW-LFGHKHFVSSICCG-KD--- 252 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEE-CCCCSSCEEEEEEC-ST---
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeee-ecCCCCceEEEEEC-CC---
Confidence 86432 2 255668899999999999 99999999999 999999999877663 46899999999999 88
Q ss_pred cceEEEEeCCCCeEEEecccc----cCC-------------------------CCccceeEEEEeeCCCeeEeee-cCCe
Q psy11524 265 ERHVAFIDKNRDLYLSMWSHS----LDK-------------------------PDTGSVYDLVWSSDATQIAGAC-ANGS 314 (323)
Q Consensus 265 d~~l~~~~~~~~~~~~~~~~~----~~~-------------------------~~~~~v~~~~~s~~g~~l~s~~-~dg~ 314 (323)
..+++++.++.+.+|++... ... .....|.+++|+|++++|++++ .|+.
T Consensus 253 -~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~ 331 (450)
T 2vdu_B 253 -YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKC 331 (450)
T ss_dssp -TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSE
T ss_pred -CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCe
Confidence 78888888888888887654 111 1235689999999999999998 8999
Q ss_pred EEEEEe
Q psy11524 315 LLLGTI 320 (323)
Q Consensus 315 i~~~~l 320 (323)
|++|++
T Consensus 332 i~iw~~ 337 (450)
T 2vdu_B 332 IIILEM 337 (450)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999998
No 110
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-29 Score=235.74 Aligned_cols=232 Identities=10% Similarity=0.097 Sum_probs=188.4
Q ss_pred eecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCce-eEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeC
Q psy11524 76 RTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKA-TKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDT 154 (323)
Q Consensus 76 ~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~ 154 (323)
..+.|...|++++|+|++++||+|+.+ +.|++|+..... .....|...|.+++|+| |++|++++.|++|+ +||+
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~D-g~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~---lWd~ 86 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVT-GEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVY---VLSL 86 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETT-SEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEETTCEEE---EEET
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCC-CEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEE---EEEC
Confidence 345689999999999999999998877 699999987653 23345788999999999 88999999999999 9999
Q ss_pred C-CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeee------------ecCCCCccEEEEEEcCC-CC
Q psy11524 155 D-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHS------------LDKPDTGSVYDLVWSND-AT 219 (323)
Q Consensus 155 ~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~------------~~~~~~~~v~~~~~~~~-~~ 219 (323)
+ ++.+..+. +...|++++|+|+++++++|+.+ .|++||+++.... ...+|.+.|.+++|+|+ +.
T Consensus 87 ~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~ 165 (902)
T 2oaj_A 87 YSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIG 165 (902)
T ss_dssp TTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEE
T ss_pred CCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCC
Confidence 6 55666665 66889999999999999999996 9999999865432 23568889999999996 57
Q ss_pred EEEEEecCc-EEEEEcCCCceeeeecCCCC------------------ccceEEEEEccCCCCccceEEEEeCCCCeEEE
Q psy11524 220 QIAGACANV-IHIFDISSSSSSNVTAPLSH------------------SHEITQLAVNQTGSLQERHVAFIDKNRDLYLS 280 (323)
Q Consensus 220 ~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~------------------~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~ 280 (323)
.|++++.|+ | +||+++++.+.. +..| ...|.+++|+|+| ..|++++.++.+++|
T Consensus 166 ~l~~g~~dg~v-lWd~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg----~~lasgs~Dg~i~lW 238 (902)
T 2oaj_A 166 TVLISYEYVTL-TYSLVENEIKQS--FIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS----LHIITIHEDNSLVFW 238 (902)
T ss_dssp EEEEECSSCEE-EEETTTTEEEEE--ECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS----SEEEEEETTCCEEEE
T ss_pred EEEEEeCCCcE-EEECCCCceEEE--EecccCCcCCCcccccccccccCCCeEEEEEcCCC----CEEEEEECCCeEEEE
Confidence 899999999 9 999999988876 3333 4679999999999 889999999999999
Q ss_pred ecccc--c----C---CC-------------CccceeEEEEee----CC-CeeEeeecC-----CeEEEEEe
Q psy11524 281 MWSHS--L----D---KP-------------DTGSVYDLVWSS----DA-TQIAGACAN-----GSLLLGTI 320 (323)
Q Consensus 281 ~~~~~--~----~---~~-------------~~~~v~~~~~s~----~g-~~l~s~~~d-----g~i~~~~l 320 (323)
++... + . .. |...|.+++|++ ++ ..|++|+.| ..+.+|++
T Consensus 239 d~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 239 DANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp ETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred ECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 88653 1 1 11 245799999965 43 467777666 37888874
No 111
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.2e-30 Score=213.41 Aligned_cols=252 Identities=11% Similarity=0.094 Sum_probs=185.2
Q ss_pred eEeccCCcceeeeeeccccccccceeeecCC-------CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--------
Q psy11524 50 YPISPYISVLHSYAASHSWPQALSLCRTLNV-------SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-------- 114 (323)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-------- 114 (323)
..+.+++ ..+++++.|++.++|..-.. ...|.++.|+|+ +++++.+ +.+++|+....
T Consensus 42 ~~~~~d~----~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~~~~~~~~---~~s~s~D-~~i~~w~~~~~~~~~~~~~ 113 (343)
T 3lrv_A 42 KSMYYDK----WVCMCRCEDGALHFTQLKDSKTITTITTPNPRTGGEHPA---IISRGPC-NRLLLLYPGNQITILDSKT 113 (343)
T ss_dssp SSSSEEE----EEEEEEEETTEEEEEEESSSSCEEEEEEECCCTTCCCCS---EEEECST-TEEEEEETTTEEEEEETTT
T ss_pred hhhcCCC----CEEEEECCCCcEEEEECCCCcEEEEEecCCceeeeeCCc---eEEecCC-CeEEEEEccCceEEeecCC
Confidence 3444555 45666666666666554321 356777888888 7777666 59999976533
Q ss_pred ---eeEe-eccCCCeEEEEECC--CCCEEEEEcCCCceEeeeEEeCCC-CeeeEe-ecCCCceeEEEEecCCCEEEEEeC
Q psy11524 115 ---ATKW-QAHDGLILKVAWCS--STDLILSGGEDCKYKASFVWDTDG-RQLYSS-LTHDHPISSLAWAPGGDMFAVGSY 186 (323)
Q Consensus 115 ---~~~~-~~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~i~v~d~~~-~~~~~~-~~~~~~v~~~~~~p~~~~l~~~~~ 186 (323)
+... ..|.+.|.+++|+| +++++++++.||+|+ +||++. +..... ..+...+.+++|+|++.+|++|+.
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~---~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIG---FQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP 190 (343)
T ss_dssp CCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEE---EEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT
T ss_pred cceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEE---EEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC
Confidence 1222 25668899999999 999999999999999 999964 443333 235567999999999999999998
Q ss_pred C-eEEEEeCCCC-ee-eecCC-CCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCC---CccceE--EEE
Q psy11524 187 N-TLRLCDKVGW-SH-SLDKP-DTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLS---HSHEIT--QLA 256 (323)
Q Consensus 187 ~-~i~i~d~~~~-~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~---~~~~v~--~~~ 256 (323)
| .|++||+++. .. ..+.. |...|.+++|+|+|.+|++++ ++ |++||+++++.... +.. +...+. +++
T Consensus 191 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~--~~~~~~~~~~~~~~~~~ 267 (343)
T 3lrv_A 191 DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLA--YPTYTIPEFKTGTVTYD 267 (343)
T ss_dssp TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBS--SCCCBC-----CCEEEE
T ss_pred CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCccee--ecccccccccccceEEE
Confidence 6 9999998854 33 45566 899999999999999999999 66 99999999877654 332 333443 699
Q ss_pred EccCCCCccceEEEEeC-CCCeEEEecccccCCCCccceeEEEEee---CCCeeEeeecCCeEEEEE
Q psy11524 257 VNQTGSLQERHVAFIDK-NRDLYLSMWSHSLDKPDTGSVYDLVWSS---DATQIAGACANGSLLLGT 319 (323)
Q Consensus 257 ~~p~g~~~d~~l~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~---~g~~l~s~~~dg~i~~~~ 319 (323)
|+|++ .+++++.. ++.+.+|++..........++..++|+| +++.|++++.||.+.++-
T Consensus 268 ~~~~g----~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 268 IDDSG----KNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp ECTTS----SEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred ECCCC----CEEEEecCCCCcEEEEEEcccccceEecCceeEecCccccccceeEEEecCCceEEEE
Confidence 99999 88888887 8889999886521111124567889998 888999999999988764
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=5.2e-28 Score=209.00 Aligned_cols=265 Identities=8% Similarity=-0.036 Sum_probs=197.8
Q ss_pred ceeEeeEeccCCcceeeeeecc---cccc-ccceeeec------CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc
Q psy11524 45 GTVINYPISPYISVLHSYAASH---SWPQ-ALSLCRTL------NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK 114 (323)
Q Consensus 45 ~~v~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~------~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~ 114 (323)
..+.++.|+|++..++....++ .||. +.+..+.. .|...|.+++|+|+++.+++++.+ +.|++|+....
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d-~~v~~~d~~~~ 201 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQA-NAVHVFDLKTL 201 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGG-TEEEEEETTTC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCC-CEEEEEECCCc
Confidence 3456899999663332221111 2442 23333321 377899999999999988887666 69999998764
Q ss_pred --eeEeeccCCCeEEEEECCCCCEEE-EEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEe------
Q psy11524 115 --ATKWQAHDGLILKVAWCSSTDLIL-SGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGS------ 185 (323)
Q Consensus 115 --~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~------ 185 (323)
...+..|...+.+++|+|+++.++ +++.++.|+ +||++.............+.+++|+|+++.+++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~---~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 278 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDIS---VIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQ 278 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEE---EEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTT
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEE---EEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCcc
Confidence 566778899999999999999875 555799999 99996444433333456699999999999998887
Q ss_pred --CC-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEE-EEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccC
Q psy11524 186 --YN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQI-AGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQT 260 (323)
Q Consensus 186 --~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~ 260 (323)
.+ .|++||+++........+...+.+++|+|+++.+ ++++.++ |++||+.+++.+..+ .+...+.+++|+|+
T Consensus 279 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~---~~~~~~~~~~~s~d 355 (433)
T 3bws_A 279 ESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSI---PVFDKPNTIALSPD 355 (433)
T ss_dssp CSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEE---ECSSSEEEEEECTT
T ss_pred ccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEe---cCCCCCCeEEEcCC
Confidence 34 8999999866554444566789999999999765 5557788 999999999888762 35677899999999
Q ss_pred CCCccceEEEEeC---------------CCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeec-CCeEEEEEe
Q psy11524 261 GSLQERHVAFIDK---------------NRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACA-NGSLLLGTI 320 (323)
Q Consensus 261 g~~~d~~l~~~~~---------------~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~-dg~i~~~~l 320 (323)
+ +.+.+.+. ++.+.+|+.... .... ...+.+++|+|+|++|++++. |+.|++|++
T Consensus 356 g----~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 356 G----KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRR 430 (433)
T ss_dssp S----SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred C----CEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEe
Confidence 8 66666655 347778877654 2222 457899999999999988775 999999998
Q ss_pred e
Q psy11524 321 I 321 (323)
Q Consensus 321 ~ 321 (323)
.
T Consensus 431 ~ 431 (433)
T 3bws_A 431 D 431 (433)
T ss_dssp T
T ss_pred c
Confidence 5
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=233.04 Aligned_cols=238 Identities=14% Similarity=0.177 Sum_probs=190.7
Q ss_pred eEeecccceeEeeEeccCCcceeeeeecc---cccc---ccceeeec-CCCCCEEEEEEcCC--CCeEEEEeeCCeEEEE
Q psy11524 38 LTIRRYDGTVINYPISPYISVLHSYAASH---SWPQ---ALSLCRTL-NVSPPVYSAAWSPD--SNKVLLTQAKSLVIKP 108 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~-~~~~~v~~~~~sp~--~~~l~~~~~~~~~v~~ 108 (323)
..+.+|.+.|.++.|+|++..++....++ .|+. +.+....+ .|...|++++|+|+ +++|++++.+ +.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-g~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-GKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-SCEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-CeEEE
Confidence 45789999999999999996665554444 2542 22333344 38999999999998 9999998877 69999
Q ss_pred eCCCCc----eeEeeccCCCeEEEEECCC--CCEEEEEcCCCceEeeeEEeCCCC---eeeEeecCCCceeEEEEec---
Q psy11524 109 LSPNNK----ATKWQAHDGLILKVAWCSS--TDLILSGGEDCKYKASFVWDTDGR---QLYSSLTHDHPISSLAWAP--- 176 (323)
Q Consensus 109 ~~~~~~----~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~~i~v~d~~~~---~~~~~~~~~~~v~~~~~~p--- 176 (323)
|+..+. ...+..|...|.+++|+|+ ++.+++++.||.|+ +||+... ....+..|...|.+++|+|
T Consensus 82 wd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~---vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~ 158 (753)
T 3jro_A 82 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS---VVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (753)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE---EEECCSSSCCCCEEEECCSSCEEEEEECCCC-
T ss_pred EECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE---EEEeecCCCcceeEeecCCCceEEEEecCccc
Confidence 998765 4566789999999999999 99999999999999 9999633 4556778999999999999
Q ss_pred ----------CCCEEEEEeCC-eEEEEeCCCC-----eeeecCCCCccEEEEEEcCC---CCEEEEEecCc-EEEEEcCC
Q psy11524 177 ----------GGDMFAVGSYN-TLRLCDKVGW-----SHSLDKPDTGSVYDLVWSND---ATQIAGACANV-IHIFDISS 236 (323)
Q Consensus 177 ----------~~~~l~~~~~~-~i~i~d~~~~-----~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~-i~iwd~~~ 236 (323)
++.++++++.| .|++||++.. ....+.+|...|.+++|+|+ +++|++++.|+ |++||+++
T Consensus 159 ~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp --------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 58999999996 9999998643 23456789999999999999 89999999999 99999998
Q ss_pred Ccee---eeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecc
Q psy11524 237 SSSS---NVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWS 283 (323)
Q Consensus 237 ~~~~---~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~ 283 (323)
++.. .......|...|.+++|+|++ ..+++++.++.+.+|++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~l~~spdg----~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 239 EQGPWKKTLLKEEKFPDVLWRASWSLSG----NVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SSSCCBCCBSSSSCCSSCCCCEEECTTT----CCEEEECSSSCEECCBCC
T ss_pred CCCcceeEEeccCCCCCceEEEEEcCCC----CEEEEEcCCCEEEEEecC
Confidence 7421 111145688899999999999 788888889999999876
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=212.35 Aligned_cols=218 Identities=8% Similarity=-0.041 Sum_probs=171.4
Q ss_pred EEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCC--------
Q psy11524 88 AWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGR-------- 157 (323)
Q Consensus 88 ~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~-------- 157 (323)
.+.+++..+++|+.+ +.|++||.... ...+. ...|.++.|+|+ +++++.|++|+ +|+.++.
T Consensus 43 ~~~~d~~~l~sg~~D-g~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~---~w~~~~~~~~~~~~~ 113 (343)
T 3lrv_A 43 SMYYDKWVCMCRCED-GALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLL---LLYPGNQITILDSKT 113 (343)
T ss_dssp SSSEEEEEEEEEEET-TEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEE---EEETTTEEEEEETTT
T ss_pred hhcCCCCEEEEECCC-CcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEE---EEEccCceEEeecCC
Confidence 345678889998888 59999998765 33343 466778888887 99999999999 9976432
Q ss_pred --eeeEee-cCCCceeEEEEec--CCCEEEEEeCC-eEEEEeCCCC-eeeec-CCCCccEEEEEEcCCCCEEEEEecCc-
Q psy11524 158 --QLYSSL-THDHPISSLAWAP--GGDMFAVGSYN-TLRLCDKVGW-SHSLD-KPDTGSVYDLVWSNDATQIAGACANV- 228 (323)
Q Consensus 158 --~~~~~~-~~~~~v~~~~~~p--~~~~l~~~~~~-~i~i~d~~~~-~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~- 228 (323)
.+..+. .|..+|.+++|+| +++++++++.| .|++||+++. ..... ..+...+.+++|+|+|.+|++|+.|+
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~ 193 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGI 193 (343)
T ss_dssp CCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSC
T ss_pred cceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCE
Confidence 233333 5667899999999 99999999996 9999998854 33333 34556799999999999999999999
Q ss_pred EEEEEcCCCcee-eeecCCC-CccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc--c--CC---CCcccee--EE
Q psy11524 229 IHIFDISSSSSS-NVTAPLS-HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS--L--DK---PDTGSVY--DL 297 (323)
Q Consensus 229 i~iwd~~~~~~~-~~~~~~~-~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~--~--~~---~~~~~v~--~~ 297 (323)
|++||+++++.+ .. +.. |..+|.+++|+|++ ..+++++ ++.+.+|++... . .. .|...+. ++
T Consensus 194 i~iwd~~~~~~~~~~--~~~~h~~~v~~l~fs~~g----~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (343)
T 3lrv_A 194 LDVYNLSSPDQASSR--FPVDEEAKIKEVKFADNG----YWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTY 266 (343)
T ss_dssp EEEEESSCTTSCCEE--CCCCTTSCEEEEEECTTS----SEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEE
T ss_pred EEEEECCCCCCCccE--EeccCCCCEEEEEEeCCC----CEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEE
Confidence 999999999877 55 566 89999999999998 7888888 559999998875 1 11 1234444 69
Q ss_pred EEeeCCCeeEeeec-CCeEEEEEee
Q psy11524 298 VWSSDATQIAGACA-NGSLLLGTII 321 (323)
Q Consensus 298 ~~s~~g~~l~s~~~-dg~i~~~~l~ 321 (323)
+|+|+|++|++++. |+.|++|++.
T Consensus 267 ~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 267 DIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEecCCCCcEEEEEEc
Confidence 99999999999998 9999999873
No 115
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=2.5e-28 Score=210.91 Aligned_cols=238 Identities=18% Similarity=0.271 Sum_probs=191.3
Q ss_pred eEeecccceeEeeEeccC-Ccceeeeeecc---ccccc-----------cceeeec-CCCCCEEEEEEcCCCC-eEEEEe
Q psy11524 38 LTIRRYDGTVINYPISPY-ISVLHSYAASH---SWPQA-----------LSLCRTL-NVSPPVYSAAWSPDSN-KVLLTQ 100 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~---~~~~~-----------~~~~~~~-~~~~~v~~~~~sp~~~-~l~~~~ 100 (323)
.....|.+.|.++.|+|+ +..++....++ .|+.. ......+ .|...|++++|+|+++ +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 445689999999999997 54444433333 24422 2222222 4889999999999998 777776
Q ss_pred eCCeEEEEeCCCCc---------eeEeeccCCCeEEEEECC-CCCEEEEEcCCCceEeeeEEeCCC----CeeeEeecCC
Q psy11524 101 AKSLVIKPLSPNNK---------ATKWQAHDGLILKVAWCS-STDLILSGGEDCKYKASFVWDTDG----RQLYSSLTHD 166 (323)
Q Consensus 101 ~~~~~v~~~~~~~~---------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~i~v~d~~~----~~~~~~~~~~ 166 (323)
.+ +.|++|+.... ...+..|...|.+++|+| ++.+|++++.|+.|+ +||++. +....+..|.
T Consensus 202 ~d-g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~---i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 202 DD-HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLM---IWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp TT-SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEE---EEETTCSCSSSCSEEEECCS
T ss_pred CC-CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEE---EEECCCCCCCcceeEeecCC
Confidence 65 69999998762 345668999999999999 678999999999999 999963 4667778899
Q ss_pred CceeEEEEecCCC-EEEEEeCC-eEEEEeCCC--CeeeecCCCCccEEEEEEcCCCC-EEEEEecCc-EEEEEcCC----
Q psy11524 167 HPISSLAWAPGGD-MFAVGSYN-TLRLCDKVG--WSHSLDKPDTGSVYDLVWSNDAT-QIAGACANV-IHIFDISS---- 236 (323)
Q Consensus 167 ~~v~~~~~~p~~~-~l~~~~~~-~i~i~d~~~--~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~-i~iwd~~~---- 236 (323)
..|++++|+|++. ++++++.+ .|++||++. ..+..+..|...|.+++|+|+++ +|++++.|+ |++||+..
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 9999999999887 58888886 999999875 34566777999999999999985 688999999 99999986
Q ss_pred ----------CceeeeecCCCCccceEEEEEccCCCCccc-eEEEEeCCCCeEEEecccc
Q psy11524 237 ----------SSSSNVTAPLSHSHEITQLAVNQTGSLQER-HVAFIDKNRDLYLSMWSHS 285 (323)
Q Consensus 237 ----------~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~-~l~~~~~~~~~~~~~~~~~ 285 (323)
.+.+.. +.+|...|.+++|+|++ . .++..+.++.+.+|++...
T Consensus 358 ~~~~~~~~~~~~~~~~--~~~h~~~v~~~~~~p~~----~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFI--HGGHTAKISDFSWNPNE----PWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CCHHHHHHCCTTEEEE--CCCCSSCEEEEEECSSS----TTEEEEEETTSEEEEEEECHH
T ss_pred cCccccccCCcceEEE--cCCCCCCceEEEECCCC----CCEEEEEECCCCEEEeEcccc
Confidence 244455 67889999999999998 5 8889999999999998764
No 116
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=1.8e-28 Score=206.41 Aligned_cols=225 Identities=18% Similarity=0.170 Sum_probs=173.8
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEeeccCCCeEEEEECCCCCEE-EEEcCCCceEeeeEEeCC-C
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVAWCSSTDLI-LSGGEDCKYKASFVWDTD-G 156 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~i~v~d~~-~ 156 (323)
.|...|++++|+|||++|++|+.+ .+++|+..........+...+..+++.++++.+ ++++.|++|+ +||.. +
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~~~--~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~---iWd~~~~ 91 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILSTLK--SFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVH---IWDDVKK 91 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEECSS--EEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEE---EEETTTT
T ss_pred cCCCceEEEEECCCCCEEEEEcCC--EEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEE---EEECCCC
Confidence 389999999999999999987655 367998776543333333457888999988877 5677789999 99996 5
Q ss_pred CeeeEeecCCCceeEEEEecCCCEEEEEeCCeEEEEeCCCC--eeeecCCCCccEEEEEEcCCCCEEEE--EecCc-EEE
Q psy11524 157 RQLYSSLTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGW--SHSLDKPDTGSVYDLVWSNDATQIAG--ACANV-IHI 231 (323)
Q Consensus 157 ~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~--~~~d~-i~i 231 (323)
+.+..+. +...|.+++|+++ .++++.++.|++||+... .+..+.. ....+++++ .++++ ++.++ |++
T Consensus 92 ~~~~~~~-~~~~v~~v~~~~~--~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~i 163 (355)
T 3vu4_A 92 QDVSRIK-VDAPVKDLFLSRE--FIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHI 163 (355)
T ss_dssp EEEEEEE-CSSCEEEEEECSS--EEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEE
T ss_pred cEEEEEE-CCCceEEEEEcCC--EEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEE
Confidence 5555554 6778999999876 456666679999998754 2222222 455667777 56666 47788 999
Q ss_pred EEcCCCc---------------e-eeeecCCCCccceEEEEEccCCCCccceEEEEeCCCC-eEEEecccc----cCC-C
Q psy11524 232 FDISSSS---------------S-SNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRD-LYLSMWSHS----LDK-P 289 (323)
Q Consensus 232 wd~~~~~---------------~-~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~-~~~~~~~~~----~~~-~ 289 (323)
||+++++ + +.. +.+|...|.+++|+|++ ..++.++.++. +++|++... ... +
T Consensus 164 wd~~~~~~~~~~~~~~~~~~~~p~~~~--~~~h~~~v~~~~~s~~g----~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g 237 (355)
T 3vu4_A 164 TKLQSSGSATTQDQGVQQKAILGKGVL--IKAHTNPIKMVRLNRKS----DMVATCSQDGTIIRVFKTEDGVLVREFRRG 237 (355)
T ss_dssp EECCC------------------CCEE--ECCCSSCEEEEEECTTS----SEEEEEETTCSEEEEEETTTCCEEEEEECT
T ss_pred EECCCCCccccccccccccccCcccEE--EEccCCceEEEEECCCC----CEEEEEeCCCCEEEEEECCCCcEEEEEEcC
Confidence 9999865 1 445 68899999999999999 89999999998 999999865 222 3
Q ss_pred -CccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 290 -DTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 290 -~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
|...|.+++|+|+|++|++++.|++|++|++.+
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~ 271 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFN 271 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEEETTCEEEEEESSC
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCEEEEEEccC
Confidence 889999999999999999999999999999853
No 117
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=5.8e-28 Score=205.93 Aligned_cols=239 Identities=13% Similarity=0.111 Sum_probs=180.4
Q ss_pred ccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEE-EEcCCCceE
Q psy11524 71 ALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLIL-SGGEDCKYK 147 (323)
Q Consensus 71 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~ 147 (323)
+.++...+.+...+.+++|+|+|+++++++..++.|++||.... ...+. +...+.+++|+|++++|+ +++.++.|+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~~~~~v~ 99 (391)
T 1l0q_A 21 SNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP-AGSSPQGVAVSPDGKQVYVTNMASSTLS 99 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCeEEEEeecCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE-CCCCccceEECCCCCEEEEEECCCCEEE
Confidence 34455566666779999999999998666655579999998665 33444 444899999999999775 455679999
Q ss_pred eeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEE-EEeCC-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEE-EEE
Q psy11524 148 ASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFA-VGSYN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQI-AGA 224 (323)
Q Consensus 148 ~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~ 224 (323)
+||+..........+...+.+++|+|+++.++ +++.+ .|++||+.+............+.+++|+|++++| +++
T Consensus 100 ---v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 176 (391)
T 1l0q_A 100 ---VIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVAN 176 (391)
T ss_dssp ---EEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEE
T ss_pred ---EEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEe
Confidence 99997555444444556789999999999874 55545 9999998765443322334567999999999988 566
Q ss_pred ecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEe---CCCCeEEEecccc----cCCCCccceeE
Q psy11524 225 CANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFID---KNRDLYLSMWSHS----LDKPDTGSVYD 296 (323)
Q Consensus 225 ~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~---~~~~~~~~~~~~~----~~~~~~~~v~~ 296 (323)
+.++ |++||+++++.+.. ..+...+.+++|+|++ ..+.+.+ .++.+.+|++... .... ...+.+
T Consensus 177 ~~~~~v~~~d~~~~~~~~~---~~~~~~~~~~~~~~~g----~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~ 248 (391)
T 1l0q_A 177 FDSMSISVIDTVTNSVIDT---VKVEAAPSGIAVNPEG----TKAYVTNVDKYFNTVSMIDTGTNKITARIPV-GPDPAG 248 (391)
T ss_dssp TTTTEEEEEETTTTEEEEE---EECSSEEEEEEECTTS----SEEEEEEECSSCCEEEEEETTTTEEEEEEEC-CSSEEE
T ss_pred CCCCEEEEEECCCCeEEEE---EecCCCccceEECCCC----CEEEEEecCcCCCcEEEEECCCCeEEEEEec-CCCccE
Confidence 6778 99999999988776 2345678999999998 6676666 5677888887653 2222 345789
Q ss_pred EEEeeCCCee-EeeecCCeEEEEEee
Q psy11524 297 LVWSSDATQI-AGACANGSLLLGTII 321 (323)
Q Consensus 297 ~~~s~~g~~l-~s~~~dg~i~~~~l~ 321 (323)
++|+|+|++| ++++.|+.|++|++.
T Consensus 249 ~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 249 IAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEEccCCCEEEEEcCCCCEEEEEECC
Confidence 9999999977 677889999999974
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=3.2e-28 Score=210.61 Aligned_cols=221 Identities=18% Similarity=0.257 Sum_probs=191.8
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD- 155 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~- 155 (323)
.|...|.++.+ +++++++|+.+ +.|++||..+. ...+.+|.+.|.+++| ++++|++|+.||.|+ +||++
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~d-g~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~---vwd~~~ 202 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRD-NTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVR---VWDVNT 202 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESS-SCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEE---EEESSS
T ss_pred CCCCcEEEEEE--CCCEEEEEeCC-CeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEE---EEECCC
Confidence 36678998887 78999988777 69999998765 6678899999999998 788999999999999 99995
Q ss_pred CCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCC-ee---eecCCCCccEEEEEEcCCCCEEEEEecCc-E
Q psy11524 156 GRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGW-SH---SLDKPDTGSVYDLVWSNDATQIAGACANV-I 229 (323)
Q Consensus 156 ~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~-~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i 229 (323)
++.+..+..|...|.+++|+ +..+++++.| .|++||++.. .. ....+|...|.+++| ++++|++++.|+ |
T Consensus 203 ~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i 278 (435)
T 1p22_A 203 GEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTI 278 (435)
T ss_dssp CCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEE
T ss_pred CcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeE
Confidence 77788888999999999997 4589999986 9999998743 22 466789999999999 678999999999 9
Q ss_pred EEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCe
Q psy11524 230 HIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQ 305 (323)
Q Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~ 305 (323)
++||+++++.+.. +.+|...+.+++|+ + ..+++++.++.+.+|++... ....|...|.+++| ++++
T Consensus 279 ~vwd~~~~~~~~~--~~~~~~~v~~~~~~--~----~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~ 348 (435)
T 1p22_A 279 KVWNTSTCEFVRT--LNGHKRGIACLQYR--D----RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKR 348 (435)
T ss_dssp EEEETTTCCEEEE--EECCSSCEEEEEEE--T----TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSE
T ss_pred EEEECCcCcEEEE--EcCCCCcEEEEEeC--C----CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCE
Confidence 9999999999888 67899999999984 4 68899999999999998765 45668899999999 7889
Q ss_pred eEeeecCCeEEEEEee
Q psy11524 306 IAGACANGSLLLGTII 321 (323)
Q Consensus 306 l~s~~~dg~i~~~~l~ 321 (323)
|++|+.||.|++|++.
T Consensus 349 l~sg~~dg~i~vwd~~ 364 (435)
T 1p22_A 349 IVSGAYDGKIKVWDLV 364 (435)
T ss_dssp EEEEETTSCEEEEEHH
T ss_pred EEEEeCCCcEEEEECC
Confidence 9999999999999973
No 119
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=1.3e-27 Score=205.75 Aligned_cols=234 Identities=17% Similarity=0.228 Sum_probs=186.8
Q ss_pred EeecccceeEeeEeccCCcceeeeeecc---ccc-cccceeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCC
Q psy11524 39 TIRRYDGTVINYPISPYISVLHSYAASH---SWP-QALSLCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNN 113 (323)
Q Consensus 39 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~ 113 (323)
.+.+|...|.+++|+|+|..++....++ .|+ .+.+..+.+ .|...+.+++++ +..|++++.+ +.+++|+...
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d-~~i~~~d~~~ 218 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRS-GHIHHHDVRV 218 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETT-SEEEEEETTS
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCC-CceeEeeecc
Confidence 4557888999999999995554433333 243 222333333 388899988875 6788887766 5999998765
Q ss_pred c---eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCC-----CeeeEeecCCCceeEEEEecCC-CEEEEE
Q psy11524 114 K---ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG-----RQLYSSLTHDHPISSLAWAPGG-DMFAVG 184 (323)
Q Consensus 114 ~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~-----~~~~~~~~~~~~v~~~~~~p~~-~~l~~~ 184 (323)
. ...+..|...+..+.|+|+++++++++.|+.++ +|+... ..+.....+...|.+++|+|++ ..++++
T Consensus 219 ~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~---i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~ 295 (420)
T 4gga_A 219 AEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVN---VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATG 295 (420)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE---EEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEE
T ss_pred cceeeEEecccccceeeeeecCCCCeeeeeeccccce---EEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEE
Confidence 4 567889999999999999999999999999999 999852 2345667788999999999964 455554
Q ss_pred e--CC-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEe--cCc-EEEEEcCCCceeeeecCCCCccceEEEEEc
Q psy11524 185 S--YN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGAC--ANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVN 258 (323)
Q Consensus 185 ~--~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 258 (323)
+ .| .|++||+.+........+...+.++.|+|+++.+++++ .|+ |++||+.+++++.+ +.+|...|.+++|+
T Consensus 296 ~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~--l~gH~~~V~~l~~s 373 (420)
T 4gga_A 296 GGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAE--LKGHTSRVLSLTMS 373 (420)
T ss_dssp ECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEE--ECCCSSCEEEEEEC
T ss_pred eecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEE--EcCCCCCEEEEEEc
Confidence 4 36 99999998665443334567799999999999988876 678 99999999999998 78999999999999
Q ss_pred cCCCCccceEEEEeCCCCeEEEeccc
Q psy11524 259 QTGSLQERHVAFIDKNRDLYLSMWSH 284 (323)
Q Consensus 259 p~g~~~d~~l~~~~~~~~~~~~~~~~ 284 (323)
|+| ..|++++.|+.+++|++..
T Consensus 374 pdg----~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 374 PDG----ATVASAAADETLRLWRCFE 395 (420)
T ss_dssp TTS----SCEEEEETTTEEEEECCSC
T ss_pred CCC----CEEEEEecCCeEEEEECCC
Confidence 999 8999999999999999865
No 120
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=1.3e-27 Score=204.43 Aligned_cols=235 Identities=17% Similarity=0.222 Sum_probs=185.5
Q ss_pred CCCCCEEEEEEcC-CCCeEEEEeeCCeEEEEeCCCCc--eeEe-------------eccCCCeEEEEECC-CCCEEEEEc
Q psy11524 79 NVSPPVYSAAWSP-DSNKVLLTQAKSLVIKPLSPNNK--ATKW-------------QAHDGLILKVAWCS-STDLILSGG 141 (323)
Q Consensus 79 ~~~~~v~~~~~sp-~~~~l~~~~~~~~~v~~~~~~~~--~~~~-------------~~~~~~v~~~~~~~-~~~~l~~~~ 141 (323)
.|.+.|++++|+| ++++|++++.+ +.|++|+.... ...+ ..|...|.+++|+| ++.+|++++
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~d-g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSD-GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETT-SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCC-CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 3999999999999 99999998777 69999998765 2222 24999999999999 778999999
Q ss_pred CCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecC---CCEEEEEeCC-eEEEEeCCC-CeeeecCCCCccEEEEEEcC
Q psy11524 142 EDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPG---GDMFAVGSYN-TLRLCDKVG-WSHSLDKPDTGSVYDLVWSN 216 (323)
Q Consensus 142 ~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~---~~~l~~~~~~-~i~i~d~~~-~~~~~~~~~~~~v~~~~~~~ 216 (323)
.||.|+ +||++.........+...+.++.|+|. +.++++++.+ .|++||++. .....+..|...|.+++|+|
T Consensus 120 ~d~~i~---iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 196 (408)
T 4a11_B 120 FDKTLK---VWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP 196 (408)
T ss_dssp TTSEEE---EEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS
T ss_pred CCCeEE---EeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC
Confidence 999999 999986655555557888999999984 4589999986 999999874 45567778999999999999
Q ss_pred CCC-EEEEEecCc-EEEEEcCCCc-eeeee-------------cCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEE
Q psy11524 217 DAT-QIAGACANV-IHIFDISSSS-SSNVT-------------APLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLS 280 (323)
Q Consensus 217 ~~~-~l~~~~~d~-i~iwd~~~~~-~~~~~-------------~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~ 280 (323)
+++ .|++++.|+ |++||++++. .+..+ ....|...|.+++|+|++ ..+++++.++.+.+|
T Consensus 197 ~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 197 RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG----LHLLTVGTDNRMRLW 272 (408)
T ss_dssp SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS----SEEEEEETTSCEEEE
T ss_pred CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC----CEEEEecCCCeEEEE
Confidence 998 588999999 9999998765 22220 015688899999999998 899999999999999
Q ss_pred eccccc----CC-----CCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 281 MWSHSL----DK-----PDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 281 ~~~~~~----~~-----~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
++.... .. .....+........+..++.++.|+.|++|++.
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~ 322 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVY 322 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETT
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECc
Confidence 987641 00 101122222223345678888899999999974
No 121
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=4.6e-28 Score=196.71 Aligned_cols=240 Identities=14% Similarity=0.110 Sum_probs=169.0
Q ss_pred eeeeEeecccceeEeeEeccCCcceeeeeeccccccccceeeecC--CCCCEEEEEEcCC----CCeEEEEeeCCeEEEE
Q psy11524 35 KNHLTIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLCRTLN--VSPPVYSAAWSPD----SNKVLLTQAKSLVIKP 108 (323)
Q Consensus 35 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~sp~----~~~l~~~~~~~~~v~~ 108 (323)
+...+..+|+.+|..+.+.||..-+. +-.++ +...|.+++++|+ ++.++.++.+ +.+
T Consensus 77 ~~~~~~~~~~~~v~~~~~~~~~~~~~--------------~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~---~~v 139 (356)
T 2w18_A 77 EKLYTWHFAEVPVLQIVPVPDVYNLV--------------CVALGNLEIREIRALFCSSDDESEKQVLLKSGNI---KAV 139 (356)
T ss_dssp EEEEEEECCSSCEEEECCCTTCCSCE--------------EEEECSSSEEEEEEECC------CCEEEEEEEEE---EEE
T ss_pred eeeEEEeccCceeEEEEEcCccccee--------------eeeeccccccceEEEEECCCccccccEEEeCCCe---EEE
Confidence 34456777777888888887653221 12222 4567888888888 7777775522 344
Q ss_pred eCCCCceeEeeccCCCeEEEEECCCCCEEEEEc--CCCceEeeeEEeCC--CCeeeEeecCCCceeEEEEec---CCCEE
Q psy11524 109 LSPNNKATKWQAHDGLILKVAWCSSTDLILSGG--EDCKYKASFVWDTD--GRQLYSSLTHDHPISSLAWAP---GGDMF 181 (323)
Q Consensus 109 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~i~v~d~~--~~~~~~~~~~~~~v~~~~~~p---~~~~l 181 (323)
| ++ ++++++.+++ .|+.|+ +|++. ++.+..+..|...+..++|+| ++..|
T Consensus 140 ~-----------------~l---~~g~lv~ss~~g~d~~V~---~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~L 196 (356)
T 2w18_A 140 L-----------------GL---TKRRLVSSSGTLSDQQVE---VMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEAL 196 (356)
T ss_dssp E-----------------EE---TTTEEEEEESSSTTCEEE---EEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEE
T ss_pred E-----------------ec---CCCcEEEecccCCCCcEE---EEEECCCCceeeeeccCCCceeeEEeeccCCCCceE
Confidence 4 22 4666666644 589999 99983 677778888999999999999 77999
Q ss_pred EEEeCC-eEEEEeCC-CCeeeecCCCC---ccEEEEEEcCCCCEE------------EEEecCc-EEEEEcCCCceeeee
Q psy11524 182 AVGSYN-TLRLCDKV-GWSHSLDKPDT---GSVYDLVWSNDATQI------------AGACANV-IHIFDISSSSSSNVT 243 (323)
Q Consensus 182 ~~~~~~-~i~i~d~~-~~~~~~~~~~~---~~v~~~~~~~~~~~l------------~~~~~d~-i~iwd~~~~~~~~~~ 243 (323)
++++.| +|+|||++ ++.+..+.+|. ..+.+++|+|+|+++ ++|+.|+ |++||..+++.+..+
T Consensus 197 aSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 197 LGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE
T ss_pred EEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence 999997 99999988 45566665543 357788999999987 5577889 999999999877652
Q ss_pred c---CCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCcccee-EEEEeeCCCeeEeeecCCeE
Q psy11524 244 A---PLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVY-DLVWSSDATQIAGACANGSL 315 (323)
Q Consensus 244 ~---~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~-~~~~s~~g~~l~s~~~dg~i 315 (323)
. ..+|...+.+..++ + ..++.++.|+.+++|++..+ .+++|...+. .++|||||++|++|+.|++|
T Consensus 277 ~~~~p~Gh~~~~lsg~~s--g----~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TI 350 (356)
T 2w18_A 277 LYCLPPGQAGRFLEGDVK--D----HCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNI 350 (356)
T ss_dssp EECCCTTCCCCEEEEEEE--T----TEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCE
T ss_pred EeeccCCCcceeEccccC--C----CEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcE
Confidence 1 13555444444443 4 57778888888888888775 4455666554 68999999999999999999
Q ss_pred EEEEe
Q psy11524 316 LLGTI 320 (323)
Q Consensus 316 ~~~~l 320 (323)
+||++
T Consensus 351 klWd~ 355 (356)
T 2w18_A 351 FVYHY 355 (356)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 99996
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=2.3e-26 Score=198.65 Aligned_cols=236 Identities=10% Similarity=0.067 Sum_probs=182.7
Q ss_pred eeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--ee-----EeeccCCCeEEEEECCCCCEEEEEcCCCce
Q psy11524 74 LCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--AT-----KWQAHDGLILKVAWCSSTDLILSGGEDCKY 146 (323)
Q Consensus 74 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~-----~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 146 (323)
....+.....+.+++|+|++ .+++++..++.|++||..+. .. .+..|...|.+++|+|+++++++++.|+.|
T Consensus 115 ~~~~~~~~~~~~~~~~s~~~-~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v 193 (433)
T 3bws_A 115 FISRFKTGFQPKSVRFIDNT-RLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAV 193 (433)
T ss_dssp EEEEEECSSCBCCCEESSSS-EEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEE
T ss_pred EEEEEcCCCCceEEEEeCCC-eEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEE
Confidence 34444556677799999954 45555555568999998765 22 234788899999999999999999999999
Q ss_pred EeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEe-CC-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEE
Q psy11524 147 KASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGS-YN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAG 223 (323)
Q Consensus 147 ~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 223 (323)
+ +||++ ++....+..+...+.+++|+|+++.+++++ .+ .|++||+++............+.+++|+|+|++|++
T Consensus 194 ~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~ 270 (433)
T 3bws_A 194 H---VFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYI 270 (433)
T ss_dssp E---EEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEE
T ss_pred E---EEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEE
Confidence 9 99996 567777778888999999999999886666 45 999999886544433334566999999999999998
Q ss_pred Ee--------cCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceE-EEEeCCCCeEEEecccc----cCCC
Q psy11524 224 AC--------ANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHV-AFIDKNRDLYLSMWSHS----LDKP 289 (323)
Q Consensus 224 ~~--------~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l-~~~~~~~~~~~~~~~~~----~~~~ 289 (323)
++ .|+ |++||+++++.+.. ..+...+..++|+|++ +.+ .....++.+.+|++... ...
T Consensus 271 ~~~~~~~~~~~dg~i~~~d~~~~~~~~~---~~~~~~~~~~~~~~~g----~~l~~~~~~~~~v~v~d~~~~~~~~~~~- 342 (433)
T 3bws_A 271 AQFSASNQESGGGRLGIYSMDKEKLIDT---IGPPGNKRHIVSGNTE----NKIYVSDMCCSKIEVYDLKEKKVQKSIP- 342 (433)
T ss_dssp EEEESCTTCSCCEEEEEEETTTTEEEEE---EEEEECEEEEEECSST----TEEEEEETTTTEEEEEETTTTEEEEEEE-
T ss_pred EECCCCccccCCCeEEEEECCCCcEEee---ccCCCCcceEEECCCC----CEEEEEecCCCEEEEEECCCCcEEEEec-
Confidence 88 488 99999999887775 3455688999999998 444 33456666777776543 111
Q ss_pred CccceeEEEEeeCCCeeEeeec---------------CCeEEEEEee
Q psy11524 290 DTGSVYDLVWSSDATQIAGACA---------------NGSLLLGTII 321 (323)
Q Consensus 290 ~~~~v~~~~~s~~g~~l~s~~~---------------dg~i~~~~l~ 321 (323)
+...+.+++|+|+|++|++++. ||.|++|++.
T Consensus 343 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 343 VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT
T ss_pred CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECC
Confidence 3677899999999998888776 5799999874
No 123
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.2e-26 Score=199.15 Aligned_cols=215 Identities=16% Similarity=0.090 Sum_probs=174.6
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCC--eEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEE-EEcCCCc--eEeeeEE
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKS--LVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLIL-SGGEDCK--YKASFVW 152 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~--~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~--i~~i~v~ 152 (323)
.|...+.+++|+|+|++|++++.++ ..|++||..+. ...+..|...+.+++|+|||+.|+ +++.++. |. +|
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~---~~ 252 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLY---VM 252 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEE---EE
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEE---EE
Confidence 4788999999999999999998663 48999998765 556778888999999999999887 6666655 66 99
Q ss_pred eCCCCeeeEeecCCCceeEEEEecCCCEEEEEeC-C---eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecC-
Q psy11524 153 DTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-N---TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACAN- 227 (323)
Q Consensus 153 d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~---~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 227 (323)
|+.+.....+..+...+.+++|+|||++|++++. + .|++||+.+.....+..+...+.+++|+|+|++|++++.+
T Consensus 253 d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~ 332 (415)
T 2hqs_A 253 DLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNG 332 (415)
T ss_dssp ETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECS
T ss_pred ECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcC
Confidence 9987777788888889999999999999988876 3 6888898876555555577789999999999999988864
Q ss_pred --c-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCC---CeEEEecccc---cCCCCccceeEEE
Q psy11524 228 --V-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNR---DLYLSMWSHS---LDKPDTGSVYDLV 298 (323)
Q Consensus 228 --~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~---~~~~~~~~~~---~~~~~~~~v~~~~ 298 (323)
. |++||+.+++... +..+. .+.+++|+|+| +.|++...++ .+++|++... ....|.+.|.+++
T Consensus 333 g~~~i~~~d~~~~~~~~---l~~~~-~~~~~~~spdg----~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~ 404 (415)
T 2hqs_A 333 GQQHIAKQDLATGGVQV---LSSTF-LDETPSLAPNG----TMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPA 404 (415)
T ss_dssp SCEEEEEEETTTCCEEE---CCCSS-SCEEEEECTTS----SEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEE
T ss_pred CceEEEEEECCCCCEEE---ecCCC-CcCCeEEcCCC----CEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCc
Confidence 5 9999999887743 45554 89999999999 7777766555 5777776654 4556788999999
Q ss_pred EeeCCC
Q psy11524 299 WSSDAT 304 (323)
Q Consensus 299 ~s~~g~ 304 (323)
|+|.-.
T Consensus 405 ~~~~~~ 410 (415)
T 2hqs_A 405 WSPYLH 410 (415)
T ss_dssp ECCCCC
T ss_pred cccccc
Confidence 999743
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=8e-26 Score=192.67 Aligned_cols=235 Identities=14% Similarity=0.071 Sum_probs=174.6
Q ss_pred eEeecccceeEeeEeccCCcceee-eeecc---ccc-cccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCC
Q psy11524 38 LTIRRYDGTVINYPISPYISVLHS-YAASH---SWP-QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPN 112 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~---~~~-~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~ 112 (323)
..+..|. .+.++.|+|++..++. ...++ .|| .+.++...+.+...+.+++|+|++++|++++.+++.|++||..
T Consensus 26 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~ 104 (391)
T 1l0q_A 26 ATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTT 104 (391)
T ss_dssp EEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECC
Confidence 3445554 4789999999975421 11222 355 3555566666677999999999999998877666799999988
Q ss_pred Cc-eeEeeccCCCeEEEEECCCCCEE-EEEcCCCceEeeeEEeCCC-CeeeEeecCCCceeEEEEecCCCEEEEE-eCC-
Q psy11524 113 NK-ATKWQAHDGLILKVAWCSSTDLI-LSGGEDCKYKASFVWDTDG-RQLYSSLTHDHPISSLAWAPGGDMFAVG-SYN- 187 (323)
Q Consensus 113 ~~-~~~~~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~i~v~d~~~-~~~~~~~~~~~~v~~~~~~p~~~~l~~~-~~~- 187 (323)
.. ......+...+.+++|+|+++.+ ++++.++.|+ +||+.. +....+.. ...+.+++|+|+++.++++ +.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~---~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~ 180 (391)
T 1l0q_A 105 SNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVS---VINTVTKAVINTVSV-GRSPKGIAVTPDGTKVYVANFDSM 180 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEE---EEETTTTEEEEEEEC-CSSEEEEEECTTSSEEEEEETTTT
T ss_pred CCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEE---EEECCCCcEEEEEec-CCCcceEEECCCCCEEEEEeCCCC
Confidence 66 33333455678999999999977 6888899999 999964 44444444 4567999999999988544 445
Q ss_pred eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEe---cCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCC
Q psy11524 188 TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGAC---ANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSL 263 (323)
Q Consensus 188 ~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~ 263 (323)
.|++||+++........+...+.+++|+|+|++|++++ .++ |++||+++++.+.. +..+ ..+.+++|+|++
T Consensus 181 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~--~~~~-~~~~~~~~s~dg-- 255 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITAR--IPVG-PDPAGIAVTPDG-- 255 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEE--EECC-SSEEEEEECTTS--
T ss_pred EEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEE--EecC-CCccEEEEccCC--
Confidence 99999998765544444667899999999999999888 577 99999999988877 3444 357899999998
Q ss_pred ccceE-EEEeCCCCeEEEeccc
Q psy11524 264 QERHV-AFIDKNRDLYLSMWSH 284 (323)
Q Consensus 264 ~d~~l-~~~~~~~~~~~~~~~~ 284 (323)
+.+ .....++.+.+|++..
T Consensus 256 --~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 256 --KKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp --SEEEEEETTTTEEEEEETTT
T ss_pred --CEEEEEcCCCCEEEEEECCC
Confidence 555 3445567777777654
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.96 E-value=1.7e-25 Score=191.97 Aligned_cols=218 Identities=9% Similarity=0.066 Sum_probs=173.8
Q ss_pred CCeEEEEeeCC-----eEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCCC---ceEeeeEEeCCCCeeeEee
Q psy11524 93 SNKVLLTQAKS-----LVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGEDC---KYKASFVWDTDGRQLYSSL 163 (323)
Q Consensus 93 ~~~l~~~~~~~-----~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~~i~v~d~~~~~~~~~~ 163 (323)
+..+++++.+. +.|++||..+. ...+..|...+.+++|+|||++|++++.++ .|+ +||+++.....+.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~---~~d~~tg~~~~l~ 219 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALV---IQTLANGAVRQVA 219 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEE---EEETTTCCEEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEE---EEECCCCcEEEee
Confidence 67777776642 69999998765 677888999999999999999999999875 788 9999766666778
Q ss_pred cCCCceeEEEEecCCCEEEE-EeCC---eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEec-Cc---EEEEEcC
Q psy11524 164 THDHPISSLAWAPGGDMFAV-GSYN---TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACA-NV---IHIFDIS 235 (323)
Q Consensus 164 ~~~~~v~~~~~~p~~~~l~~-~~~~---~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~---i~iwd~~ 235 (323)
.+...+.+++|+|||+.|+. ++.+ .|++||+.+.....+..+...+.+++|+|||++|++++. ++ |++||+.
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 88889999999999998884 4432 699999987666777778889999999999999988876 44 7777988
Q ss_pred CCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCC---CCeEEEecccc---cCCCCccceeEEEEeeCCCeeEee
Q psy11524 236 SSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKN---RDLYLSMWSHS---LDKPDTGSVYDLVWSSDATQIAGA 309 (323)
Q Consensus 236 ~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~---~~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~s~ 309 (323)
+++... +..+...+..++|+|+| +.|++...+ ..+.+|++... ....|. .+.+++|+|||++|+++
T Consensus 300 ~~~~~~---l~~~~~~~~~~~~spdG----~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~-~~~~~~~spdg~~l~~~ 371 (415)
T 2hqs_A 300 GGAPQR---ITWEGSQNQDADVSSDG----KFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF-LDETPSLAPNGTMVIYS 371 (415)
T ss_dssp SSCCEE---CCCSSSEEEEEEECTTS----SEEEEEEECSSCEEEEEEETTTCCEEECCCSS-SCEEEEECTTSSEEEEE
T ss_pred CCCEEE---EecCCCcccCeEECCCC----CEEEEEECcCCceEEEEEECCCCCEEEecCCC-CcCCeEEcCCCCEEEEE
Confidence 876543 45566788999999999 677666543 35777777654 222333 78999999999999988
Q ss_pred ecCC---eEEEEEee
Q psy11524 310 CANG---SLLLGTII 321 (323)
Q Consensus 310 ~~dg---~i~~~~l~ 321 (323)
+.++ .|++|++.
T Consensus 372 s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 372 SSQGMGSVLNLVSTD 386 (415)
T ss_dssp EEETTEEEEEEEETT
T ss_pred EcCCCccEEEEEECC
Confidence 8777 78888863
No 126
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=9.5e-26 Score=186.59 Aligned_cols=230 Identities=17% Similarity=0.224 Sum_probs=182.5
Q ss_pred EeecccceeEeeEeccCCcceeeeeecccccccccee--------eec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEe
Q psy11524 39 TIRRYDGTVINYPISPYISVLHSYAASHSWPQALSLC--------RTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPL 109 (323)
Q Consensus 39 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~ 109 (323)
.+.+|...|.++.|+|+++.+ ++|+.|++.++| +.+ .|...+.++.+ ++..+++++.+ +.+++|
T Consensus 62 ~~~~~~~~V~~v~~~~~~~~l----~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~-~~~~~~ 134 (318)
T 4ggc_A 62 QMEQPGEYISSVAWIKEGNYL----AVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRS-GHIHHH 134 (318)
T ss_dssp ECCSTTCCEEEEEECTTSSEE----EEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETT-SEEEEE
T ss_pred EecCCCCeEEEEEECCCCCEE----EEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecC-CceEee
Confidence 456788999999999999544 455544444443 333 37777776555 56788887766 588887
Q ss_pred CCCCc---eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCC-----CeeeEeecCCCceeEEEEecCCCE-
Q psy11524 110 SPNNK---ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG-----RQLYSSLTHDHPISSLAWAPGGDM- 180 (323)
Q Consensus 110 ~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~-----~~~~~~~~~~~~v~~~~~~p~~~~- 180 (323)
+.... ...+..|...+..+.+++++++|++++.|+.|+ +||+.. ........+...|.+++++|++..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~---iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 211 (318)
T 4ggc_A 135 DVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVN---VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 211 (318)
T ss_dssp ETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE---EEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTE
T ss_pred ecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCccee---EEECCCCcccccceeeecccCCceEEEEecCCCCcE
Confidence 76554 566789999999999999999999999999999 999952 223455667888999999997554
Q ss_pred EEE--EeCC-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEe--cCc-EEEEEcCCCceeeeecCCCCccceEE
Q psy11524 181 FAV--GSYN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGAC--ANV-IHIFDISSSSSSNVTAPLSHSHEITQ 254 (323)
Q Consensus 181 l~~--~~~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~ 254 (323)
+.. ++.+ .|++||.+.........+...+..+.|+|+++.+++++ .|+ |++||+++++++.+ +.+|...|++
T Consensus 212 ~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~--l~gH~~~V~~ 289 (318)
T 4ggc_A 212 LATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAE--LKGHTSRVLS 289 (318)
T ss_dssp EEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEE--ECCCSSCEEE
T ss_pred EEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEE--EcCCCCCEEE
Confidence 333 3334 89999988665555555778899999999999888765 688 99999999999998 7899999999
Q ss_pred EEEccCCCCccceEEEEeCCCCeEEEeccc
Q psy11524 255 LAVNQTGSLQERHVAFIDKNRDLYLSMWSH 284 (323)
Q Consensus 255 ~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~ 284 (323)
++|+|++ ..|++++.|+.+++|++..
T Consensus 290 l~~spdg----~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 290 LTMSPDG----ATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEECTTS----SCEEEEETTTEEEEECCSC
T ss_pred EEEcCCC----CEEEEEecCCeEEEEECCC
Confidence 9999999 8999999999999999865
No 127
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=1.4e-26 Score=197.50 Aligned_cols=213 Identities=10% Similarity=0.053 Sum_probs=154.3
Q ss_pred eeeeccccccccceeee-------------c-CCCCCEEEEEEcC--------CCCeEEEEeeCCeEEEEeCCCCc--ee
Q psy11524 61 SYAASHSWPQALSLCRT-------------L-NVSPPVYSAAWSP--------DSNKVLLTQAKSLVIKPLSPNNK--AT 116 (323)
Q Consensus 61 ~~~~~~~~~~~~~~~~~-------------~-~~~~~v~~~~~sp--------~~~~l~~~~~~~~~v~~~~~~~~--~~ 116 (323)
.++++++.|++.++|.. + .|.+.|++++|+| |+++||+++.| +.|++||.... ..
T Consensus 102 ~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D-~tv~~Wd~~~~~~~~ 180 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD-CTLIIWRLTDEGPIL 180 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT-SEEEEEEEETTEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC-CeEEEEECCCCceee
Confidence 45667777777666531 2 3899999999998 88999999887 59999997554 66
Q ss_pred EeeccCCCeEEEEECCCC-CEEEEEcCCCceEeeeEEeCCCC-eee-------------------------EeecCCCce
Q psy11524 117 KWQAHDGLILKVAWCSST-DLILSGGEDCKYKASFVWDTDGR-QLY-------------------------SSLTHDHPI 169 (323)
Q Consensus 117 ~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~i~v~d~~~~-~~~-------------------------~~~~~~~~v 169 (323)
.+..|...+.+++|+|++ .+|++++.|++|+ +||++.. ... ...+|...+
T Consensus 181 ~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~---~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v 257 (393)
T 4gq1_A 181 AGYPLSSPGISVQFRPSNPNQLIVGERNGNIR---IFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSL 257 (393)
T ss_dssp EEEECSSCEEEEEEETTEEEEEEEEETTSEEE---EEETTCCC----------CSCCCSEEEESGGGC------CCSSSC
T ss_pred eecCCCCCcEEEEECCCCCceEEecCCCCEEE---EEECCCCcccccccccCCcccceEEecccccceeeeecccccccc
Confidence 677899999999999987 4899999999999 9998532 111 113466778
Q ss_pred eEEEEe-cCCCEEEEEeCC-eEEEEeCCCC-eeeecCCCCccEE------------------EEEEcC--CCCEEEEEec
Q psy11524 170 SSLAWA-PGGDMFAVGSYN-TLRLCDKVGW-SHSLDKPDTGSVY------------------DLVWSN--DATQIAGACA 226 (323)
Q Consensus 170 ~~~~~~-p~~~~l~~~~~~-~i~i~d~~~~-~~~~~~~~~~~v~------------------~~~~~~--~~~~l~~~~~ 226 (323)
.+++|+ |+++.+++++.| ++++||+... ....+..+...+. ...|+| ++.++++++.
T Consensus 258 ~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~ 337 (393)
T 4gq1_A 258 ANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQ 337 (393)
T ss_dssp SEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETT
T ss_pred eeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECC
Confidence 899987 799999999997 9999998643 2222222222222 233444 4446777888
Q ss_pred Cc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEeccc
Q psy11524 227 NV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSH 284 (323)
Q Consensus 227 d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~ 284 (323)
|+ |++||+.+++.... +..|..+|.+++|+|+| +.|++.+.+| +.+|.+..
T Consensus 338 Dg~V~lwd~~~~~~~~~--~~~~~~~V~svafspdG----~~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSI--PIQLGMPIVDFCWHQDG----SHLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp TTEEEEEETTCTTCCEE--EEECSSCEEEEEECTTS----SEEEEEESSE-EEEEEEGG
T ss_pred CCEEEEEECCCCcEEEE--ecCCCCcEEEEEEcCCC----CEEEEEeCCC-eEEEEEeC
Confidence 99 99999999988877 57788899999999999 8999887654 66665543
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.94 E-value=7.8e-25 Score=177.84 Aligned_cols=214 Identities=10% Similarity=0.025 Sum_probs=151.9
Q ss_pred ccceeEeeEeccCCcceeeeeeccccccccceeeecCCCCCEEEEEEcCCCCeEEEEe-eCCeEEEEeCCCC-c--eeEe
Q psy11524 43 YDGTVINYPISPYISVLHSYAASHSWPQALSLCRTLNVSPPVYSAAWSPDSNKVLLTQ-AKSLVIKPLSPNN-K--ATKW 118 (323)
Q Consensus 43 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~~~v~~~~~~~-~--~~~~ 118 (323)
+...|.++.++|+.+.+-..+++++. ...|.++ ++|+.+.+++ ..++.|++|+... . ...+
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~------------~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~ 174 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGN------------IKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQ 174 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEE------------EEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCC------------eEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeee
Confidence 46688999999993333244444321 1222333 5666555532 2335888888744 2 5567
Q ss_pred eccCCCeEEEEECC---CCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCC---CceeEEEEecCCCEE----------
Q psy11524 119 QAHDGLILKVAWCS---STDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHD---HPISSLAWAPGGDMF---------- 181 (323)
Q Consensus 119 ~~~~~~v~~~~~~~---~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~---~~v~~~~~~p~~~~l---------- 181 (323)
..|...+..++|+| ++.+|++++.|++|+ +||++ ++.+.++.++. ..+.+++|+|+|.++
T Consensus 175 ~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIk---IWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w 251 (356)
T 2w18_A 175 FLMPPEETILTFAEVQGMQEALLGTTIMNNIV---IWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKE 251 (356)
T ss_dssp EECCCSSCEEEEEEEETSTTEEEEEETTSEEE---EEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------
T ss_pred ccCCCceeeEEeeccCCCCceEEEecCCCcEE---EEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcc
Confidence 78999999999999 779999999999999 99996 77888887643 357788999999887
Q ss_pred --EEEeCC-eEEEEeCCCCee-eec-----CCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccc
Q psy11524 182 --AVGSYN-TLRLCDKVGWSH-SLD-----KPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHE 251 (323)
Q Consensus 182 --~~~~~~-~i~i~d~~~~~~-~~~-----~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~ 251 (323)
++|+.| ++++||..+... ..+ .+|...+.+..++ +.++++++.|+ |+|||+.+++.+.+ +.+|...
T Consensus 252 ~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~t--L~gH~~~ 327 (356)
T 2w18_A 252 SESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTAL--LPPVSDQ 327 (356)
T ss_dssp ------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEE--ECCC--C
T ss_pred eeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEE--ecCCCCC
Confidence 446667 999999875533 222 3555555544444 77899999999 99999999999998 6778765
Q ss_pred eE-EEEEccCCCCccceEEEEeCCCCeEEEec
Q psy11524 252 IT-QLAVNQTGSLQERHVAFIDKNRDLYLSMW 282 (323)
Q Consensus 252 v~-~~~~~p~g~~~d~~l~~~~~~~~~~~~~~ 282 (323)
+. .++|+|+| .+|+.++.|+.+++|++
T Consensus 328 vvs~vafSPDG----~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 328 HWSFVKWSGTD----SHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CCCEEEECSSS----SEEEEECTTSCEEEEEE
T ss_pred eEEEEEECCCC----CEEEEEECCCcEEEecC
Confidence 54 68999999 89999999999999985
No 129
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=1.3e-24 Score=200.25 Aligned_cols=265 Identities=11% Similarity=0.062 Sum_probs=189.7
Q ss_pred cceeEeeEeccCCcceeeeee-cc--------cccc-ccceeeecCC---C----------------------CCEEEEE
Q psy11524 44 DGTVINYPISPYISVLHSYAA-SH--------SWPQ-ALSLCRTLNV---S----------------------PPVYSAA 88 (323)
Q Consensus 44 ~~~v~~~~~~~~~~~~~~~~~-~~--------~~~~-~~~~~~~~~~---~----------------------~~v~~~~ 88 (323)
...+.++.|+|||+.++.... ++ .||. +.+..+.+.+ . ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 446889999999987775554 33 2442 2222222321 1 2378999
Q ss_pred EcCCCCeEEEEeeCCeEEEEeCCCCc----eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeec
Q psy11524 89 WSPDSNKVLLTQAKSLVIKPLSPNNK----ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLT 164 (323)
Q Consensus 89 ~sp~~~~l~~~~~~~~~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~ 164 (323)
|||||++|++++. +.|++|+..+. ...+..+...+..++|+|||++|++++ ++.|. +||+.+.....+..
T Consensus 116 ~SpDg~~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~---~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 116 WSPDAQRLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLW---VIDLASGRQMQLTA 189 (741)
T ss_dssp ECTTSSEEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEE---EEETTTTEEEECCC
T ss_pred ECCCCCEEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEE---EEecCCCCEEEecc
Confidence 9999999998875 58999998654 456777888999999999999999887 45777 99997665555433
Q ss_pred CCCc-----------------eeEEEEecCCCEEEEEeC-C---------------------------------eEEEEe
Q psy11524 165 HDHP-----------------ISSLAWAPGGDMFAVGSY-N---------------------------------TLRLCD 193 (323)
Q Consensus 165 ~~~~-----------------v~~~~~~p~~~~l~~~~~-~---------------------------------~i~i~d 193 (323)
.... +.+++|+|||++|++++. + .|++||
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 2221 478999999999988864 2 788899
Q ss_pred CCC-CeeeecC---CCCccEEEEEEcCCCCEEEEEec-----Cc-EEEEEcCCCceeeeecCCCCcc----ceEEEEEcc
Q psy11524 194 KVG-WSHSLDK---PDTGSVYDLVWSNDATQIAGACA-----NV-IHIFDISSSSSSNVTAPLSHSH----EITQLAVNQ 259 (323)
Q Consensus 194 ~~~-~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~-----d~-i~iwd~~~~~~~~~~~~~~~~~----~v~~~~~~p 259 (323)
+.+ ....... .+...+..++| |||++|++++. +. |++||+.+++.... +..+.. .+..++|+|
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~--~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVL--AHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEE--EEEECSSCCCCCSCCEECT
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEE--EEcCCCCcCCcCCceEECC
Confidence 876 5443322 46778999999 99999987764 45 99999999887665 222222 456889999
Q ss_pred CCCCccceEEEEeCCCCeEEEeccc--c--cCCCCccceeEE-EEeeCCCeeE-eeecCC--eEEEEEee
Q psy11524 260 TGSLQERHVAFIDKNRDLYLSMWSH--S--LDKPDTGSVYDL-VWSSDATQIA-GACANG--SLLLGTII 321 (323)
Q Consensus 260 ~g~~~d~~l~~~~~~~~~~~~~~~~--~--~~~~~~~~v~~~-~~s~~g~~l~-s~~~dg--~i~~~~l~ 321 (323)
+| +.+.+.+.++...+|.+.. . ....|...+..+ +|+|+|+.|+ +++.++ .+++|++.
T Consensus 347 dg----~~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 347 DG----SILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp TS----CEEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred CC----eEEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 98 6777777777777776542 1 233446677777 5999999776 555555 89999874
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=2.3e-24 Score=176.12 Aligned_cols=228 Identities=16% Similarity=0.111 Sum_probs=167.7
Q ss_pred eecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCC-c-eeE-eecc-CCCeEEEEECCCCCEEEEEc--CCCceEee
Q psy11524 76 RTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNN-K-ATK-WQAH-DGLILKVAWCSSTDLILSGG--EDCKYKAS 149 (323)
Q Consensus 76 ~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~-~-~~~-~~~~-~~~v~~~~~~~~~~~l~~~~--~d~~i~~i 149 (323)
....|...+.+++|+|+|++|++++ + +.|++|+..+ . ... ...+ ...+.+++|+|++++|++++ .++... |
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~-~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~-l 112 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-E-GLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSA-I 112 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-T-TEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCE-E
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-C-CeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcce-E
Confidence 3445788999999999999999875 4 4899999877 4 322 3334 36788999999999999988 334555 2
Q ss_pred eEEeCCCCeeeEeecCCCceeEEEEecCCCEEE-EEeCC-eEEEEeC--CCCeeeecCCCCccEEEEEEcCCCCEEEEEe
Q psy11524 150 FVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFA-VGSYN-TLRLCDK--VGWSHSLDKPDTGSVYDLVWSNDATQIAGAC 225 (323)
Q Consensus 150 ~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-~~~~~-~i~i~d~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 225 (323)
+.+++.+.....+..+. .+..++|+|+++.++ ++..+ .+++|++ .+.....+..+...+.+++|+|+|++|++++
T Consensus 113 ~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 113 YLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence 25555555555555443 488999999999887 44444 7888874 4555566666788899999999999888776
Q ss_pred c-Cc-EEEEEcC-CCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCC-----------CCeEEEecccc----cC
Q psy11524 226 A-NV-IHIFDIS-SSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKN-----------RDLYLSMWSHS----LD 287 (323)
Q Consensus 226 ~-d~-i~iwd~~-~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~-----------~~~~~~~~~~~----~~ 287 (323)
. ++ +++|++. .+..... +..+...+..++|+|++ ..|++...+ ..+.+|++... +.
T Consensus 192 ~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~s~dg----~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 192 SRTGQMQIWRVRVDGSSVER--ITDSAYGDWFPHPSPSG----DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp CTTSSCEEEEEETTSSCEEE--CCCCSEEEEEEEECTTS----SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred cCCCCccEEEECCCCCCcEE--EecCCcccCCeEECCCC----CEEEEEEcCCCCCcccccCceEEEEEecCCCCceeee
Confidence 4 77 9999876 4455555 67777889999999999 666665543 34677776553 11
Q ss_pred --CCCccceeEEEEeeCCCeeEeeecCC
Q psy11524 288 --KPDTGSVYDLVWSSDATQIAGACANG 313 (323)
Q Consensus 288 --~~~~~~v~~~~~s~~g~~l~s~~~dg 313 (323)
..|...+.+++|+|+|++|++++.+.
T Consensus 266 ~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 266 DLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred ccCCCCcccccceECCCCCEEEEEEecc
Confidence 13567889999999999998887664
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=2.3e-24 Score=198.52 Aligned_cols=231 Identities=12% Similarity=0.125 Sum_probs=171.5
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCe-----EEEEeCCCCc-ee-EeeccC------------------------CCeEEEE
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSL-----VIKPLSPNNK-AT-KWQAHD------------------------GLILKVA 129 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~-----~v~~~~~~~~-~~-~~~~~~------------------------~~v~~~~ 129 (323)
...+.+++|||||++|++++..++ .|++|+..+. .. .+..+. ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 567999999999999999987234 8999998765 22 232222 2378899
Q ss_pred ECCCCCEEEEEcCCCceEeeeEEeCCCC---eeeEeecCCCceeEEEEecCCCEEEEEeCCeEEEEeCCCCeeeecC-CC
Q psy11524 130 WCSSTDLILSGGEDCKYKASFVWDTDGR---QLYSSLTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHSLDK-PD 205 (323)
Q Consensus 130 ~~~~~~~l~~~~~d~~i~~i~v~d~~~~---~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~~~~~~~-~~ 205 (323)
|+|||++|++++. +.|. +||+.+. ....+..+...+.+++|+|||++|++++.+.|++||+.+....... .+
T Consensus 116 ~SpDg~~l~~~~~-~~i~---~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~ 191 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELY---LYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADG 191 (741)
T ss_dssp ECTTSSEEEEEET-TEEE---EEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCC
T ss_pred ECCCCCEEEEEeC-CcEE---EEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCC
Confidence 9999999999886 8888 9999866 7777888888899999999999999999889999999866444332 23
Q ss_pred Ccc----------------EEEEEEcCCCCEEEEEecC----------------------------------cEEEEEcC
Q psy11524 206 TGS----------------VYDLVWSNDATQIAGACAN----------------------------------VIHIFDIS 235 (323)
Q Consensus 206 ~~~----------------v~~~~~~~~~~~l~~~~~d----------------------------------~i~iwd~~ 235 (323)
... +..++|||||++|++++.| .|++||+.
T Consensus 192 ~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~ 271 (741)
T 2ecf_A 192 STTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPA 271 (741)
T ss_dssp CSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSS
T ss_pred ccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECC
Confidence 222 4789999999999887643 27788988
Q ss_pred C-CceeeeecCCCCccceEEEEEccCCCCccceEEEEeC-----CCCeEEEecccc----cCCCCc-c---ceeEEEEee
Q psy11524 236 S-SSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDK-----NRDLYLSMWSHS----LDKPDT-G---SVYDLVWSS 301 (323)
Q Consensus 236 ~-~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~-----~~~~~~~~~~~~----~~~~~~-~---~v~~~~~s~ 301 (323)
+ ++.........+...+..++| |+| +.|++... +..+.+|++.+. +...+. . .+.+++|+|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~-pDg----~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 272 EQAQTQWIDLGKEQDIYLARVNW-RDP----QHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp TTCCCEEECCCSCSSEEEEEEEE-EET----TEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT
T ss_pred CCCceEEecCCCCcceEEEEEEe-CCC----CEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC
Confidence 8 776554111147788999999 999 56655432 234566665543 111111 1 456899999
Q ss_pred CCCeeEeeecCCeEEEEEe
Q psy11524 302 DATQIAGACANGSLLLGTI 320 (323)
Q Consensus 302 ~g~~l~s~~~dg~i~~~~l 320 (323)
||+++++++.||.+++|.+
T Consensus 347 dg~~~~~~~~~g~~~l~~~ 365 (741)
T 2ecf_A 347 DGSILWSSERTGFQHLYRI 365 (741)
T ss_dssp TSCEEEEECTTSSCEEEEE
T ss_pred CCeEEEEecCCCccEEEEE
Confidence 9999999999998888876
No 132
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.93 E-value=7.3e-24 Score=201.76 Aligned_cols=268 Identities=11% Similarity=0.044 Sum_probs=202.1
Q ss_pred eEeecccceeEeeEeccCCcceeeeeecc---ccc--cccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCC
Q psy11524 38 LTIRRYDGTVINYPISPYISVLHSYAASH---SWP--QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPN 112 (323)
Q Consensus 38 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~ 112 (323)
..+.+|...+.++.|+++. .++....++ .|. ......+.+.+...+..++|+|||++|+++. + +.|++|+..
T Consensus 197 ~~l~~~~~~v~~~~~s~d~-l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~-~-~~i~~~d~~ 273 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGHR-IYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSK-G-GSIYIFNPD 273 (1045)
T ss_dssp EEEECCSSCCEEEEEETTE-EEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEE-T-TEEEEECTT
T ss_pred EECcCCCCcccceEEeCCE-EEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEe-C-CEEEEecCC
Confidence 4457899999999999882 221111111 232 1122233344444567889999999999874 4 589999985
Q ss_pred Cc-eeEeec-----------cCCCeEEEEEC-CCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCC-ceeEEEEecCC
Q psy11524 113 NK-ATKWQA-----------HDGLILKVAWC-SSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDH-PISSLAWAPGG 178 (323)
Q Consensus 113 ~~-~~~~~~-----------~~~~v~~~~~~-~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~-~v~~~~~~p~~ 178 (323)
.. +..+.. |...+.+++|+ |||++|++++ ++.+. +|++.+.....+..+.. .+..++|+ ||
T Consensus 274 ~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~s-dg 348 (1045)
T 1k32_A 274 TEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAF---IQDVSGTYVLKVPEPLRIRYVRRGGD-TK 348 (1045)
T ss_dssp TCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEE---EECTTSSBEEECSCCSCEEEEEECSS-SE
T ss_pred ceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEE---EEcCCCCceEEccCCCcceEEeeeEc-CC
Confidence 44 333333 33468899999 9999999887 77888 99998766666777777 89999999 99
Q ss_pred CEEEEEeCC-eEE-EEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEE
Q psy11524 179 DMFAVGSYN-TLR-LCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQL 255 (323)
Q Consensus 179 ~~l~~~~~~-~i~-i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~ 255 (323)
+.+++++.+ .+. +||+.+.....+..+...+..++|+|||++|++++.++ |++||+.+++.... ...|...+..+
T Consensus 349 ~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~--~~~~~~~v~~~ 426 (1045)
T 1k32_A 349 VAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVI--ERSREAMITDF 426 (1045)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE--EECSSSCCCCE
T ss_pred CeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEe--ccCCCCCccce
Confidence 999999886 888 99988665555557778899999999999999999999 99999999987766 45788889999
Q ss_pred EEccCCCCccceEEEEeCC----------CCeEEEecccc---cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEE
Q psy11524 256 AVNQTGSLQERHVAFIDKN----------RDLYLSMWSHS---LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGT 319 (323)
Q Consensus 256 ~~~p~g~~~d~~l~~~~~~----------~~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~ 319 (323)
+|+|+| +.|+....+ +.+++|++... ....|...+.+++|+|||++|+.++.++...+|+
T Consensus 427 ~~SpDG----~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 427 TISDNS----RFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp EECTTS----CEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred EECCCC----CeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcc
Confidence 999999 666665443 36778877654 2334567788999999999999999887777665
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=9.2e-23 Score=180.35 Aligned_cols=264 Identities=8% Similarity=-0.002 Sum_probs=189.5
Q ss_pred eEeeEeccCCcceeeeeecc---cccc---ccceeeecCCCCCEEEEEEcC----CCCeEEEEeeCCeEEEEeCCCCc--
Q psy11524 47 VINYPISPYISVLHSYAASH---SWPQ---ALSLCRTLNVSPPVYSAAWSP----DSNKVLLTQAKSLVIKPLSPNNK-- 114 (323)
Q Consensus 47 v~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~v~~~~~sp----~~~~l~~~~~~~~~v~~~~~~~~-- 114 (323)
+..+.|+|+|+.++....++ .||. +.++...+.+...+..++|+| +|+++++++...+.|.+||....
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEP 260 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecccccc
Confidence 77899999997766544333 2443 566666777788899999999 99999999875579999997654
Q ss_pred eeEeec----------cCC-CeEEEEECCCCC-EEEEEcCCCceEeeeEEeCCC-Ceee--EeecCCCceeEEEEecCCC
Q psy11524 115 ATKWQA----------HDG-LILKVAWCSSTD-LILSGGEDCKYKASFVWDTDG-RQLY--SSLTHDHPISSLAWAPGGD 179 (323)
Q Consensus 115 ~~~~~~----------~~~-~v~~~~~~~~~~-~l~~~~~d~~i~~i~v~d~~~-~~~~--~~~~~~~~v~~~~~~p~~~ 179 (323)
+..+.. |.. .+.++.++|++. ++++...+++|. +||... +.+. .+ .+...+.+++|+|+|+
T Consensus 261 ~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~---vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 261 KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVL---LVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHR 336 (543)
T ss_dssp EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEE---EEECTTSSSCEEEEE-ECCSSCCCEEECTTSC
T ss_pred ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEE---EEEecCCCcceeEEe-ccCcCccCceECCCCC
Confidence 334432 223 789999999765 556677789999 999953 2222 33 3456688999999999
Q ss_pred EEEEEeC--CeEEEEeCCCCee-eecC----CCCccEEEEEEcCC-CCEEEEEe-cCc-EEEEEcCC-------Cceeee
Q psy11524 180 MFAVGSY--NTLRLCDKVGWSH-SLDK----PDTGSVYDLVWSND-ATQIAGAC-ANV-IHIFDISS-------SSSSNV 242 (323)
Q Consensus 180 ~l~~~~~--~~i~i~d~~~~~~-~~~~----~~~~~v~~~~~~~~-~~~l~~~~-~d~-i~iwd~~~-------~~~~~~ 242 (323)
++++++. ++|.+||..+.++ ..+. +|.+....+ ++|+ |..++++. .++ |.+||..+ ++.+++
T Consensus 337 ~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~ 415 (543)
T 1nir_A 337 YFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAE 415 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEE
T ss_pred EEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEE
Confidence 8887765 4999999876543 3332 254433333 5787 55666665 467 99999988 788888
Q ss_pred ecCCCCccceEEEEEccCCCCccceEEEEe-------CCCCeEEEecccc--c-----------CCCCccceeEEEEeeC
Q psy11524 243 TAPLSHSHEITQLAVNQTGSLQERHVAFID-------KNRDLYLSMWSHS--L-----------DKPDTGSVYDLVWSSD 302 (323)
Q Consensus 243 ~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~-------~~~~~~~~~~~~~--~-----------~~~~~~~v~~~~~s~~ 302 (323)
+..+...+..++++|++ +.|.+.. .+..+.+|++.+. . ...+...+..++|+|+
T Consensus 416 --l~~~g~~~~~v~~~pdg----~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 489 (543)
T 1nir_A 416 --LQGQGGGSLFIKTHPKS----SHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKR 489 (543)
T ss_dssp --EECSCSCCCCEECCTTC----CEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSS
T ss_pred --EEcCCCCceEEEcCCCC----CcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCC
Confidence 67777788889999999 5555543 1445666666543 1 1234678999999999
Q ss_pred CCeeEeee-----cCCeEEEEEee
Q psy11524 303 ATQIAGAC-----ANGSLLLGTII 321 (323)
Q Consensus 303 g~~l~s~~-----~dg~i~~~~l~ 321 (323)
|+.|..+. .|+.|.|||..
T Consensus 490 g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 490 GDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp SSEEEEEEECCTTSCCEEEEEETT
T ss_pred CCEEEEEeecCCCCCCeEEEEECC
Confidence 99888653 47999999864
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=2.1e-22 Score=167.64 Aligned_cols=232 Identities=12% Similarity=0.048 Sum_probs=160.1
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc---eeEeeccCCCeEEEEECCCCCEEEEEcCCC---ceEeeeEEe
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK---ATKWQAHDGLILKVAWCSSTDLILSGGEDC---KYKASFVWD 153 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---~i~~i~v~d 153 (323)
+...+ +++|+|+|+++++++..++.|++||.... ...+..+..+..+++|+|+|++++++..++ .|. +||
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~---v~d 114 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQ---SYS 114 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEE---EEE
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEE---EEE
Confidence 34455 99999999988888876679999998655 334455555555599999999998655553 899 999
Q ss_pred CCCCeeeEeecCCCceeEEEEecCCCEEEEEeC--Ce-EEEEeCCCC-ee----eecCCCCccEEEEEEcCCCCEEEEEe
Q psy11524 154 TDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSY--NT-LRLCDKVGW-SH----SLDKPDTGSVYDLVWSNDATQIAGAC 225 (323)
Q Consensus 154 ~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~--~~-i~i~d~~~~-~~----~~~~~~~~~v~~~~~~~~~~~l~~~~ 225 (323)
++...............+++|+|+|+++++++. +. +.+|++... .. .........+..++|+|+|+++++++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 194 (331)
T 3u4y_A 115 FLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVAN 194 (331)
T ss_dssp TTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEE
T ss_pred CCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEe
Confidence 975444443344556799999999986665544 47 999997632 11 11123445689999999999776665
Q ss_pred -cCc-EEEEEcCCCce---eeeecCCCCccceEEEEEccCCCCccceEEEEeC-CCCeEEEecccc-c---------CCC
Q psy11524 226 -ANV-IHIFDISSSSS---SNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDK-NRDLYLSMWSHS-L---------DKP 289 (323)
Q Consensus 226 -~d~-i~iwd~~~~~~---~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~-~~~~~~~~~~~~-~---------~~~ 289 (323)
.++ |.+||+.+++. +.. +. ....+..++|+|+| +.+.+.+. ++.+.+|+.... . ...
T Consensus 195 ~~~~~v~v~d~~~~~~~~~~~~--~~-~~~~~~~~~~spdg----~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 267 (331)
T 3u4y_A 195 LIGNSIGILETQNPENITLLNA--VG-TNNLPGTIVVSRDG----STVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLI 267 (331)
T ss_dssp TTTTEEEEEECSSTTSCEEEEE--EE-CSSCCCCEEECTTS----SEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCC
T ss_pred CCCCeEEEEECCCCcccceeee--cc-CCCCCceEEECCCC----CEEEEEEcCCCEEEEEECCCCceeeeccccccccc
Confidence 466 99999999887 665 23 34567889999999 44444432 334555555432 0 001
Q ss_pred Cc---cceeEEEEeeCCCeeEee-ecCCeEEEEEeec
Q psy11524 290 DT---GSVYDLVWSSDATQIAGA-CANGSLLLGTIIQ 322 (323)
Q Consensus 290 ~~---~~v~~~~~s~~g~~l~s~-~~dg~i~~~~l~~ 322 (323)
+. .....++|+|||++|+++ ..++.|.+|++.+
T Consensus 268 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 268 DPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp CCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred CCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 12 223568999999988655 4567999999854
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=1.2e-23 Score=193.17 Aligned_cols=266 Identities=11% Similarity=0.059 Sum_probs=177.8
Q ss_pred eeEeeEeccCCcceeeeeecc---cccc-ccceeeecCCCC----CEEEEEEcCCCCeEEEEeeCC--------eEEEEe
Q psy11524 46 TVINYPISPYISVLHSYAASH---SWPQ-ALSLCRTLNVSP----PVYSAAWSPDSNKVLLTQAKS--------LVIKPL 109 (323)
Q Consensus 46 ~v~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~----~v~~~~~sp~~~~l~~~~~~~--------~~v~~~ 109 (323)
.+.++.|+|||+.++. ..++ .||. +.+....+.+.. .|.+++|||||++|++++.+. +.+++|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 4567899999975543 2222 2552 233333444322 499999999999999987542 589999
Q ss_pred CCCCc-eeEee---ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEee-cCCCc----------------
Q psy11524 110 SPNNK-ATKWQ---AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSL-THDHP---------------- 168 (323)
Q Consensus 110 ~~~~~-~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~-~~~~~---------------- 168 (323)
+..+. ...+. .|...+..++|||||+.|++++. +.|+ +||+.+.....+. .+...
T Consensus 97 d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~---~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~ 172 (723)
T 1xfd_A 97 KIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIY---YCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEIL 172 (723)
T ss_dssp ESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEE---EESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTS
T ss_pred ECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEE---EEECCCCceEEEecCCCCCceECcccceeEEEEec
Confidence 98765 33343 33445889999999999999886 6787 9999754444433 22332
Q ss_pred --eeEEEEecCCCEEEEEeCC-----------------------------------eEEEEeCCCCe-eeecCCC-----
Q psy11524 169 --ISSLAWAPGGDMFAVGSYN-----------------------------------TLRLCDKVGWS-HSLDKPD----- 205 (323)
Q Consensus 169 --v~~~~~~p~~~~l~~~~~~-----------------------------------~i~i~d~~~~~-~~~~~~~----- 205 (323)
+.+++|+|||+.|++++.+ .|++||+.+.. ...+..+
T Consensus 173 ~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~ 252 (723)
T 1xfd_A 173 KTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRM 252 (723)
T ss_dssp SSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGG
T ss_pred cCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCC
Confidence 3789999999999988641 68999987654 2344333
Q ss_pred -CccEEEEEEcCCCCEEEEEec----Cc-EEEEEcCCCceeeeecCCCCccce----EEEEEccCCCCccceEEEE--eC
Q psy11524 206 -TGSVYDLVWSNDATQIAGACA----NV-IHIFDISSSSSSNVTAPLSHSHEI----TQLAVNQTGSLQERHVAFI--DK 273 (323)
Q Consensus 206 -~~~v~~~~~~~~~~~l~~~~~----d~-i~iwd~~~~~~~~~~~~~~~~~~v----~~~~~~p~g~~~d~~l~~~--~~ 273 (323)
...+..++|+|||++|++... +. |++||+.+++..... ...+...+ ..++|+|+| +.|++. +.
T Consensus 253 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~~~~~~~~~spdg----~~l~~~~~~~ 327 (723)
T 1xfd_A 253 REYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKH-EDESEAWLHRQNEEPVFSKDG----RKFFFIRAIP 327 (723)
T ss_dssp SSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEE-EEECSSCCCCCCCCCEECTTS----CSEEEEEEEC
T ss_pred ccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEE-EeccCCEEeccCCCceEcCCC----CeEEEEEecc
Confidence 567899999999998877653 24 999999998866542 11222333 378999999 666654 44
Q ss_pred CC------CeEEEe-ccccc------CCCCccceeE-EEEeeCCCeeEeeecC---CeEEEEEee
Q psy11524 274 NR------DLYLSM-WSHSL------DKPDTGSVYD-LVWSSDATQIAGACAN---GSLLLGTII 321 (323)
Q Consensus 274 ~~------~~~~~~-~~~~~------~~~~~~~v~~-~~~s~~g~~l~s~~~d---g~i~~~~l~ 321 (323)
++ .+.+|+ ..... ...+...+.. ++|+|||+.|+..+.+ +.+++|++.
T Consensus 328 ~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 328 QGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp CSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred cCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 45 355565 22211 1111333444 6999999998866555 789999873
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=4.4e-23 Score=172.28 Aligned_cols=239 Identities=10% Similarity=0.077 Sum_probs=167.2
Q ss_pred eeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCC--Cc-e---eEeeccCCCeEEEEECCCCCEEEEEcC-CCce
Q psy11524 74 LCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPN--NK-A---TKWQAHDGLILKVAWCSSTDLILSGGE-DCKY 146 (323)
Q Consensus 74 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~--~~-~---~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i 146 (323)
....+.+...+.+++|+|+|++|++++.+++.+.+|+.. .. . ..+..+ ..+..++|+|++++|++++. ++.|
T Consensus 30 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i 108 (343)
T 1ri6_A 30 LTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNV 108 (343)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEE
T ss_pred EeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeE
Confidence 334456778899999999999999888765789998875 32 2 233333 37889999999998766654 7889
Q ss_pred EeeeEEeCC---CCeeeEeecCCCceeEEEEecCCCEEEEEe-CC-eEEEEeCCC-Ceee------ecCCCCccEEEEEE
Q psy11524 147 KASFVWDTD---GRQLYSSLTHDHPISSLAWAPGGDMFAVGS-YN-TLRLCDKVG-WSHS------LDKPDTGSVYDLVW 214 (323)
Q Consensus 147 ~~i~v~d~~---~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~-~~-~i~i~d~~~-~~~~------~~~~~~~~v~~~~~ 214 (323)
. +||+. .............+.+++|+|+|+++++++ .+ .|++||+.. .... ........+..++|
T Consensus 109 ~---~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 1ri6_A 109 S---VTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF 185 (343)
T ss_dssp E---EEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEE
T ss_pred E---EEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEE
Confidence 9 99993 222222233445688999999999888887 44 999999875 3332 22223457889999
Q ss_pred cCCCCEEEEEe-cCc-EEEEEcCC--Cce--eeeec-CCC---CccceEEEEEccCCCCccceEEEEe-CCCCeEEEecc
Q psy11524 215 SNDATQIAGAC-ANV-IHIFDISS--SSS--SNVTA-PLS---HSHEITQLAVNQTGSLQERHVAFID-KNRDLYLSMWS 283 (323)
Q Consensus 215 ~~~~~~l~~~~-~d~-i~iwd~~~--~~~--~~~~~-~~~---~~~~v~~~~~~p~g~~~d~~l~~~~-~~~~~~~~~~~ 283 (323)
+|+|+++++++ .++ |.+||+.. ++. ..... +.. ....+..++|+|++ +.+.+.. .++.+.+|++.
T Consensus 186 ~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg----~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 186 HPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG----RHLYACDRTASLITVFSVS 261 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTS----SEEEEEETTTTEEEEEEEC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCC----CEEEEEecCCCEEEEEEEc
Confidence 99999877665 677 99999853 432 22110 111 12356789999998 6666544 56778888876
Q ss_pred c--c------cCCCCccceeEEEEeeCCCeeEeee-cCCeEEEEEee
Q psy11524 284 H--S------LDKPDTGSVYDLVWSSDATQIAGAC-ANGSLLLGTII 321 (323)
Q Consensus 284 ~--~------~~~~~~~~v~~~~~s~~g~~l~s~~-~dg~i~~~~l~ 321 (323)
. . .... ...+.+++|+|+|++|++++ .++.|.+|++.
T Consensus 262 ~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 262 EDGSVLSKEGFQPT-ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TTSCCEEEEEEEEC-SSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCCceEEeeeecC-CCccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 2 1 1112 23388999999999888777 68999999763
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=2.5e-23 Score=190.61 Aligned_cols=264 Identities=10% Similarity=0.065 Sum_probs=181.9
Q ss_pred ceeEeeEeccCCcceeeeeecc---cccc-ccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCC-----c-
Q psy11524 45 GTVINYPISPYISVLHSYAASH---SWPQ-ALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNN-----K- 114 (323)
Q Consensus 45 ~~v~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~-----~- 114 (323)
..|.++.|+|| ..++.. .++ .||. +.++.....+...+.+++|||||++|+++ .+ +.|++|+..+ .
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~-~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RN-HNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ET-TEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-EC-CeEEEEecCcccccCCC
Confidence 46899999999 433322 222 2553 33333444567789999999999999986 44 5899999875 4
Q ss_pred eeEe-eccCCC--------------eEEEEECCCCCEEEEEc---------------------------------CCCce
Q psy11524 115 ATKW-QAHDGL--------------ILKVAWCSSTDLILSGG---------------------------------EDCKY 146 (323)
Q Consensus 115 ~~~~-~~~~~~--------------v~~~~~~~~~~~l~~~~---------------------------------~d~~i 146 (323)
...+ ..+... +.++.|+|||++|++++ .+..|
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 3332 222222 47899999999999987 23445
Q ss_pred EeeeEEeCCCCeeeEee---cCCCceeEEEEecCCCEEEEEeC-C-----eEEEEeCCCC-eeeecC--CCCc---cEEE
Q psy11524 147 KASFVWDTDGRQLYSSL---THDHPISSLAWAPGGDMFAVGSY-N-----TLRLCDKVGW-SHSLDK--PDTG---SVYD 211 (323)
Q Consensus 147 ~~i~v~d~~~~~~~~~~---~~~~~v~~~~~~p~~~~l~~~~~-~-----~i~i~d~~~~-~~~~~~--~~~~---~v~~ 211 (323)
. +||+++.....+. .+...+.+++|+|||+.|++++. . .|++||+.+. ...... .+.. .+..
T Consensus 238 ~---~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 238 G---IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp E---EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred E---EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 5 9999766554443 35567899999999998888654 2 7999998765 433222 1222 2467
Q ss_pred EEEcC--CCCEEEEEecCc-EEEEEcC-CCceeeeecCCCCccceEE-EEEccCCCCccceEEEEeCC-C----CeEEEe
Q psy11524 212 LVWSN--DATQIAGACANV-IHIFDIS-SSSSSNVTAPLSHSHEITQ-LAVNQTGSLQERHVAFIDKN-R----DLYLSM 281 (323)
Q Consensus 212 ~~~~~--~~~~l~~~~~d~-i~iwd~~-~~~~~~~~~~~~~~~~v~~-~~~~p~g~~~d~~l~~~~~~-~----~~~~~~ 281 (323)
++|+| +|++++++..++ ++||++. +++.+.. +..+...+.. ++|+|++ +.|.+...+ + .+..|+
T Consensus 315 ~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~--l~~~~~~v~~~~~~spdg----~~l~~~~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQ--VTKGEWEVTNFAGFDPKG----TRLYFESTEASPLERHFYCID 388 (706)
T ss_dssp CEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEE--CCCSSSCEEEEEEECTTS----SEEEEEESSSCTTCBEEEEEE
T ss_pred ceeecCCCCEEEEEEccCCccEEEEEECCCCEEEe--cCCCCeEEEeeeEEcCCC----CEEEEEecCCCCceEEEEEEE
Confidence 89999 999999998899 8888876 5666666 5667777776 7999998 666555443 3 334444
Q ss_pred cccc--cCCCCccceeEEEEeeCCCeeEeeecC----CeEEEEEee
Q psy11524 282 WSHS--LDKPDTGSVYDLVWSSDATQIAGACAN----GSLLLGTII 321 (323)
Q Consensus 282 ~~~~--~~~~~~~~v~~~~~s~~g~~l~s~~~d----g~i~~~~l~ 321 (323)
.... ..-.|...+.+++|||||++|+....+ +.|++|++.
T Consensus 389 ~~~~~~~~l~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 389 IKGGKTKDLTPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp TTCCCCEESCCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred cCCCCceeccCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 4332 111246678999999999988866443 569999864
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.92 E-value=7.1e-23 Score=195.00 Aligned_cols=270 Identities=7% Similarity=-0.049 Sum_probs=195.9
Q ss_pred ccceeEeeEec-cCCcceeeeeecc--cccc-ccceeeecCCCC-CEEEEEEcCCCCeEEEEeeCCeEEE-EeCCCCc-e
Q psy11524 43 YDGTVINYPIS-PYISVLHSYAASH--SWPQ-ALSLCRTLNVSP-PVYSAAWSPDSNKVLLTQAKSLVIK-PLSPNNK-A 115 (323)
Q Consensus 43 ~~~~v~~~~~~-~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~~~~~v~-~~~~~~~-~ 115 (323)
|...+.++.|+ |||+.++...... .|+. .........|.. .+..++|+ ||+.|++++. +..++ +|+..+. .
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-~~~l~~~~d~~~~~~ 371 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR-EGDFLGIYDYRTGKA 371 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEET-TEEEEEEEETTTCCE
T ss_pred cccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEEC-CCceEEEEECCCCCc
Confidence 44568899999 9998776544211 1332 222233334666 89999999 9999999877 46888 9988765 4
Q ss_pred eEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCee-eEeecCCCceeEEEEecCCCEEEEEeC-C------
Q psy11524 116 TKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQL-YSSLTHDHPISSLAWAPGGDMFAVGSY-N------ 187 (323)
Q Consensus 116 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~-~~~~~~~~~v~~~~~~p~~~~l~~~~~-~------ 187 (323)
..+..|...+..++|+|||++|++++.++.|+ +||+.+... .....+...+.+++|+|||++|++++. +
T Consensus 372 ~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~---~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~ 448 (1045)
T 1k32_A 372 EKFEENLGNVFAMGVDRNGKFAVVANDRFEIM---TVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDG 448 (1045)
T ss_dssp EECCCCCCSEEEEEECTTSSEEEEEETTSEEE---EEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCS
T ss_pred eEecCCccceeeeEECCCCCEEEEECCCCeEE---EEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccC
Confidence 55567788999999999999999999999999 999975444 444478888999999999999887764 2
Q ss_pred ----eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCce-----------------------
Q psy11524 188 ----TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSS----------------------- 239 (323)
Q Consensus 188 ----~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~----------------------- 239 (323)
.|++||+.+.....+..+...+..++|+|+|++|++++.++ ..+|+......
T Consensus 449 ~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (1045)
T 1k32_A 449 YVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKL 528 (1045)
T ss_dssp CCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGC
T ss_pred CCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCcccc
Confidence 89999998776777777888899999999999999999877 77776432211
Q ss_pred ------------------eeeecCCCCccceEEEEEccCCCCccceEEE-----------EeC--CCCeEEEecccccCC
Q psy11524 240 ------------------SNVTAPLSHSHEITQLAVNQTGSLQERHVAF-----------IDK--NRDLYLSMWSHSLDK 288 (323)
Q Consensus 240 ------------------~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~-----------~~~--~~~~~~~~~~~~~~~ 288 (323)
.....+..+...+..++++|++ ..+.+ .+. ...+..|++......
T Consensus 529 ~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg----~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~ 604 (1045)
T 1k32_A 529 VPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESS----ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVT 604 (1045)
T ss_dssp CCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSE----EEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEE
T ss_pred CcCccccccccccccCHhHceEEcCCCCCChhheEEcCCC----eEEEEecccCcccccccccCCCceEEEEECCCCcEE
Confidence 0001133455678899999987 55554 122 234555555543111
Q ss_pred CCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 289 PDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 289 ~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
.-...+.+++|||||+.|++++.+ .|++|++.+
T Consensus 605 ~l~~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~ 637 (1045)
T 1k32_A 605 EVKNNLTDLRLSADRKTVMVRKDD-GKIYTFPLE 637 (1045)
T ss_dssp EEEEEEEEEEECTTSCEEEEEETT-SCEEEEESS
T ss_pred EeecCcceEEECCCCCEEEEEcCC-cEEEEeCcc
Confidence 102567899999999999998866 799999854
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=6.9e-22 Score=165.81 Aligned_cols=258 Identities=8% Similarity=0.014 Sum_probs=184.2
Q ss_pred ccceeEeeEeccCCcceeeeeecc----------ccc-cccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCC
Q psy11524 43 YDGTVINYPISPYISVLHSYAASH----------SWP-QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSP 111 (323)
Q Consensus 43 ~~~~v~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~ 111 (323)
....+..+.++|+++.++.....+ .|| .+.+..+.+.....+..++|+|+|++++++...++.|.+||.
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEET
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeC
Confidence 345677899999997775443221 244 344455555556678899999999988887776679999998
Q ss_pred CCc--eeEeeccCC---------CeEEEEECCCCCEEEEEc--CCCceEeeeEEeCCCC-eeeEeecCCCceeEEEEecC
Q psy11524 112 NNK--ATKWQAHDG---------LILKVAWCSSTDLILSGG--EDCKYKASFVWDTDGR-QLYSSLTHDHPISSLAWAPG 177 (323)
Q Consensus 112 ~~~--~~~~~~~~~---------~v~~~~~~~~~~~l~~~~--~d~~i~~i~v~d~~~~-~~~~~~~~~~~v~~~~~~p~ 177 (323)
.+. ...+..+.. .+.+++|+|+|+++++++ .++.|. +||++.. ....+..+...+.+++|+|+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~---~~d~~~~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIW---VVDGGNIKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEE---EEETTTTEEEEEECCCCTTCCCCEEETT
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEE---EEcCCCCceEEEecCCCCccceEEECCC
Confidence 765 344443322 278899999999877776 478899 9999744 44445435566889999999
Q ss_pred CCEEEEEeCC-eEEEEeCCCCeee-ecC----CCCccEEEEEEcCCCCEEEEEecC-c-EEEEEcCCCceeeeecCCCCc
Q psy11524 178 GDMFAVGSYN-TLRLCDKVGWSHS-LDK----PDTGSVYDLVWSNDATQIAGACAN-V-IHIFDISSSSSSNVTAPLSHS 249 (323)
Q Consensus 178 ~~~l~~~~~~-~i~i~d~~~~~~~-~~~----~~~~~v~~~~~~~~~~~l~~~~~d-~-i~iwd~~~~~~~~~~~~~~~~ 249 (323)
|+++++++.+ .+.+||+.+.... ... ++...+..++|+|+|+++++++.+ + |.+||..+++.+..+.. ..
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~--~~ 273 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAA--PE 273 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEEC--SS
T ss_pred CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc--CC
Confidence 9999988885 9999998765433 222 234568889999999988877765 6 99999999998876422 21
Q ss_pred cceEEEEEccCCCCccceEEEEe-CCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecC
Q psy11524 250 HEITQLAVNQTGSLQERHVAFID-KNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACAN 312 (323)
Q Consensus 250 ~~v~~~~~~p~g~~~d~~l~~~~-~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~d 312 (323)
...++|+|++ +.+.+.+ .++.+.+|+.... .... ...+.+++|+|+|++|+.+..+
T Consensus 274 --~~~~~~s~dg----~~l~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 274 --SLAVLFNPAR----NEAYVTHRQAGKVSVIDAKSYKVVKTFDT-PTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp --CCCEEEETTT----TEEEEEETTTTEEEEEETTTTEEEEEEEC-CSEEEEEEECTTSCEEEEEEEC
T ss_pred --CceEEECCCC----CEEEEEECCCCeEEEEECCCCeEEEEEec-CCCCCeEEEcCCCCEEEEEEcc
Confidence 2568999998 5555555 4566777776543 1122 3467999999999977766554
No 140
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=6.2e-22 Score=165.97 Aligned_cols=234 Identities=12% Similarity=0.023 Sum_probs=160.0
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEeeC--CeEEEEeCCCCc----eeEeeccCCCeEEEEECCCCCEEEEEc-CCCceEeee
Q psy11524 78 LNVSPPVYSAAWSPDSNKVLLTQAK--SLVIKPLSPNNK----ATKWQAHDGLILKVAWCSSTDLILSGG-EDCKYKASF 150 (323)
Q Consensus 78 ~~~~~~v~~~~~sp~~~~l~~~~~~--~~~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~i~ 150 (323)
..+...+..++|+|+|+ |++++.. ++.|++|+.... +..+..+...+..++|+|||++|++++ .++.+.
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~--- 111 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAE--- 111 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEE---
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEE---
Confidence 34566778899999999 6666542 478999998544 223345677888999999999888887 678999
Q ss_pred EEeCC-CCee---eEeec---------CCCceeEEEEecCCCEEEEEeC-C-eEEEEeCC-CCeee---e-cCCCCccEE
Q psy11524 151 VWDTD-GRQL---YSSLT---------HDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKV-GWSHS---L-DKPDTGSVY 210 (323)
Q Consensus 151 v~d~~-~~~~---~~~~~---------~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~-~~~~~---~-~~~~~~~v~ 210 (323)
+|+++ .... ..+.. ....+.+++|+|+|+ ++++.. + .|++||+. +..+. . .......+.
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~ 190 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPR 190 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCc
Confidence 99984 2222 22221 112478899999999 555444 4 99999987 33222 1 222334678
Q ss_pred EEEEcCCCCEEEEEe-cCc-EEEEEcCC--Ccee--eeecCCCC----ccceEEEEEccCCCCccceEEEE-eCCCCeEE
Q psy11524 211 DLVWSNDATQIAGAC-ANV-IHIFDISS--SSSS--NVTAPLSH----SHEITQLAVNQTGSLQERHVAFI-DKNRDLYL 279 (323)
Q Consensus 211 ~~~~~~~~~~l~~~~-~d~-i~iwd~~~--~~~~--~~~~~~~~----~~~v~~~~~~p~g~~~d~~l~~~-~~~~~~~~ 279 (323)
.++|+|+|++|++++ .++ |.+|++.. ++.. ........ ...+..++|+|+| +.|.+. ..++.+.+
T Consensus 191 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG----~~l~v~~~~~~~v~v 266 (347)
T 3hfq_A 191 HLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG----HFLYVSNRGYNTLAV 266 (347)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS----CEEEEEEETTTEEEE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC----CEEEEEeCCCCEEEE
Confidence 899999999777755 456 99999874 4432 12101111 1458899999999 666554 44677888
Q ss_pred Eecccc-------cCCCCccceeEEEEeeCCCeeEeeecC-CeEEEEEe
Q psy11524 280 SMWSHS-------LDKPDTGSVYDLVWSSDATQIAGACAN-GSLLLGTI 320 (323)
Q Consensus 280 ~~~~~~-------~~~~~~~~v~~~~~s~~g~~l~s~~~d-g~i~~~~l 320 (323)
|++... ....+...+..++|+|||++|++++.+ +.|.+|++
T Consensus 267 ~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 267 FAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 887521 112234568899999999988877754 89999976
No 141
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=1.1e-21 Score=160.11 Aligned_cols=209 Identities=11% Similarity=0.048 Sum_probs=158.2
Q ss_pred eCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCC-CeeeEee-cC-CCceeEEEEec
Q psy11524 101 AKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG-RQLYSSL-TH-DHPISSLAWAP 176 (323)
Q Consensus 101 ~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~-~~~~~~~-~~-~~~v~~~~~~p 176 (323)
..++.|++|+.... ...+..|...+.+++|+|+|++|++++ ++.|. +||+++ .....+. .+ ...+.+++|+|
T Consensus 19 ~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~---~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLY---RLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp CCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEE---EEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEE---EEeCCCCCCceEeccccccccccceEECC
Confidence 34579999998776 556777899999999999999999886 78888 999976 5444443 33 36788999999
Q ss_pred CCCEEEEEeC--C---eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEE-EEecCc-EEEEEcC--CCceeeeecCCC
Q psy11524 177 GGDMFAVGSY--N---TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIA-GACANV-IHIFDIS--SSSSSNVTAPLS 247 (323)
Q Consensus 177 ~~~~l~~~~~--~---~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~-i~iwd~~--~~~~~~~~~~~~ 247 (323)
++++|++++. + .|..++..+.....+..+ ..+..++|+|+|++|+ ++..++ +++|++. +++. .. +..
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~--~~~ 170 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TR--LTH 170 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EE--CCC
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eE--ccc
Confidence 9999999883 2 555666665544444433 3488999999999887 677788 8999853 4443 33 567
Q ss_pred CccceEEEEEccCCCCccceEEEEe-CCCCeEEEecccc-----cCCCCccceeEEEEeeCCCeeEeeecC---------
Q psy11524 248 HSHEITQLAVNQTGSLQERHVAFID-KNRDLYLSMWSHS-----LDKPDTGSVYDLVWSSDATQIAGACAN--------- 312 (323)
Q Consensus 248 ~~~~v~~~~~~p~g~~~d~~l~~~~-~~~~~~~~~~~~~-----~~~~~~~~v~~~~~s~~g~~l~s~~~d--------- 312 (323)
+...+.+++|+|++ ..+++.. .++...+|.+... ....|...+..++|+|+|++|++++.+
T Consensus 171 ~~~~~~~~~~s~dg----~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 246 (297)
T 2ojh_A 171 GEGRNDGPDYSPDG----RWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRD 246 (297)
T ss_dssp SSSCEEEEEECTTS----SEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSS
T ss_pred CCCccccceECCCC----CEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCccccc
Confidence 77889999999998 6666654 4778888887521 334456788999999999999988776
Q ss_pred --CeEEEEEee
Q psy11524 313 --GSLLLGTII 321 (323)
Q Consensus 313 --g~i~~~~l~ 321 (323)
+.|++|++.
T Consensus 247 ~~~~l~~~d~~ 257 (297)
T 2ojh_A 247 LDVRVQLMDMD 257 (297)
T ss_dssp EEEEEEEEETT
T ss_pred CceEEEEEecC
Confidence 568999864
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=2.1e-23 Score=186.98 Aligned_cols=228 Identities=14% Similarity=0.061 Sum_probs=167.7
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeeccC-CCeEEEEECCCCCEEEEEcC---CCceEeeeEEeC
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQAHD-GLILKVAWCSSTDLILSGGE---DCKYKASFVWDT 154 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~-~~v~~~~~~~~~~~l~~~~~---d~~i~~i~v~d~ 154 (323)
+..+|++++|+|||++||+++..++.+.+|+..+. ...+..+. ..+..++|+|| +.+++++. +.... ||.++.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~-l~~~~~ 97 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHA-LFKVNT 97 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEE-EEEEET
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceE-EEEEec
Confidence 35679999999999999999874578999987555 55666666 58999999999 77777664 33333 335666
Q ss_pred --CCCeeeEeecCCCceeEEEEecCCCE--EEEEeCCeEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecC---
Q psy11524 155 --DGRQLYSSLTHDHPISSLAWAPGGDM--FAVGSYNTLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACAN--- 227 (323)
Q Consensus 155 --~~~~~~~~~~~~~~v~~~~~~p~~~~--l~~~~~~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--- 227 (323)
.+... .+.... .+...+|+|+|+. +++++.+.+.+||+.+.....+..+.. .+++|+|||++|++++.+
T Consensus 98 ~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 98 SRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp TSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETT
T ss_pred cCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCC
Confidence 44443 333322 3456789998864 333334666699988665544433333 889999999999988876
Q ss_pred -c-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCC--CeEEEecccc---cCCCCccceeEEE--
Q psy11524 228 -V-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNR--DLYLSMWSHS---LDKPDTGSVYDLV-- 298 (323)
Q Consensus 228 -~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~--~~~~~~~~~~---~~~~~~~~v~~~~-- 298 (323)
. |++||+.+++... +..+...+..++|+||| +.|+..+.++ .+++|++.+. ....|...+..++
T Consensus 174 ~~~i~~~d~~~g~~~~---l~~~~~~~~~~~~SpDG----~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 246 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLRV---FDSGEGSFSSASISPGM----KVTAGLETAREARLVTVDPRDGSVEDLELPSKDFSSYRPT 246 (582)
T ss_dssp EEEEEEEETTTCCCEE---ECCSSCEEEEEEECTTS----CEEEEEECSSCEEEEEECTTTCCEEECCCSCSHHHHHCCS
T ss_pred CeEEEEEcCCCCCceE---eecCCCccccceECCCC----CEEEEccCCCeeEEEEEcCCCCcEEEccCCCcChhhhhhc
Confidence 7 9999999888664 57788889999999999 7777767777 6777777654 2334555566666
Q ss_pred ------EeeCCCeeEeeecCCeEEEEEe
Q psy11524 299 ------WSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 299 ------~s~~g~~l~s~~~dg~i~~~~l 320 (323)
|+|||.++++++.||.+++|++
T Consensus 247 ~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred cccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 9999988899999999999986
No 143
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.91 E-value=2.7e-22 Score=179.76 Aligned_cols=255 Identities=10% Similarity=0.019 Sum_probs=183.8
Q ss_pred cceeEeeEeccCCcceeeeee-cc---ccccccceeeec-CCC-CCEEEEEEcCCCCeEEEEee----CCeEEEEeCC--
Q psy11524 44 DGTVINYPISPYISVLHSYAA-SH---SWPQALSLCRTL-NVS-PPVYSAAWSPDSNKVLLTQA----KSLVIKPLSP-- 111 (323)
Q Consensus 44 ~~~v~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~-~~~-~~v~~~~~sp~~~~l~~~~~----~~~~v~~~~~-- 111 (323)
..+|+++.|+|||+.++.... ++ .|+-.....+.+ .+. ..+..++|+|| +.++++.. +...++.++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 457999999999987775443 22 354322222333 344 58999999999 65555543 2235666666
Q ss_pred CCceeEeeccCCCeEEEEECCCCCE-EEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeC----
Q psy11524 112 NNKATKWQAHDGLILKVAWCSSTDL-ILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSY---- 186 (323)
Q Consensus 112 ~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~---- 186 (323)
.+....+.... .+...+|+|||+. +++.+.++.+. +||+++.....+..+.. .+++|+|||+++++++.
T Consensus 100 ~g~~~~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~---l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 100 PGEEQRLEAVK-PMRILSGVDTGEAVVFTGATEDRVA---LYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp TTCCEECTTSC-SBEEEEEEECSSCEEEEEECSSCEE---EEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETT
T ss_pred CCccccccCCC-CceeeeeCCCCCeEEEEecCCCCce---EEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCC
Confidence 44444443332 3446788988863 34444556677 99997666666655444 88999999999996654
Q ss_pred -CeEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc---EEEEEcCCCceeeeecCCCCccceEEEE------
Q psy11524 187 -NTLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV---IHIFDISSSSSSNVTAPLSHSHEITQLA------ 256 (323)
Q Consensus 187 -~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~---i~iwd~~~~~~~~~~~~~~~~~~v~~~~------ 256 (323)
..|++||+.+.....+..+...+..++|+|||++|+++..++ |++||+.+++.. . +..+...+..++
T Consensus 174 ~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~--~~~~~~~~~~~~~~~~~~ 250 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-D--LELPSKDFSSYRPTAITW 250 (582)
T ss_dssp EEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-E--CCCSCSHHHHHCCSEEEE
T ss_pred CeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-E--ccCCCcChhhhhhccccc
Confidence 269999988766666677888899999999999999777665 899999988877 4 677777777677
Q ss_pred --EccCCCCccceEEEEeCCCCeEEEecccccCCCCccceeEEEEeeCCCeeEeeecCCe
Q psy11524 257 --VNQTGSLQERHVAFIDKNRDLYLSMWSHSLDKPDTGSVYDLVWSSDATQIAGACANGS 314 (323)
Q Consensus 257 --~~p~g~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~dg~ 314 (323)
|+|+| ..+...+.++.+.+|.+ ......+.+.+.+++|+ +|+.+++++.+..
T Consensus 251 ~~~spdg----~~~~~~~~~g~~~l~~~-g~~~~~~~~~v~~~~~s-dg~~l~~~s~~~~ 304 (582)
T 3o4h_A 251 LGYLPDG----RLAVVARREGRSAVFID-GERVEAPQGNHGRVVLW-RGKLVTSHTSLST 304 (582)
T ss_dssp EEECTTS----CEEEEEEETTEEEEEET-TEEECCCSSEEEEEEEE-TTEEEEEEEETTE
T ss_pred eeEcCCC----cEEEEEEcCCcEEEEEE-CCeeccCCCceEEEEec-CCEEEEEEcCCCC
Confidence 99998 78888888999999998 32222345778999999 9999998888755
No 144
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=5.4e-22 Score=175.45 Aligned_cols=262 Identities=8% Similarity=-0.005 Sum_probs=181.5
Q ss_pred EeccCCcceeeeeecc---ccc-cccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCC--CCc--eeEeeccC
Q psy11524 51 PISPYISVLHSYAASH---SWP-QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSP--NNK--ATKWQAHD 122 (323)
Q Consensus 51 ~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~--~~~--~~~~~~~~ 122 (323)
.++|++..++....++ .|| .+.++..++.....+..++|+|+|++|++++.+ +.|.+||. .+. +..+. +.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~d-~~V~v~D~~~~t~~~~~~i~-~g 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRD-ARIDMIDLWAKEPTKVAEIK-IG 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCEEEEEEE-CC
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECCC-CeEEEEECcCCCCcEEEEEe-cC
Confidence 4778774333322222 255 345566666634449999999999999999887 69999999 443 34444 55
Q ss_pred CCeEEEEECC----CCCEEEEEcC-CCceEeeeEEeCC-CCeeeEeecC-----------CCceeEEEEecCCCEEEEEe
Q psy11524 123 GLILKVAWCS----STDLILSGGE-DCKYKASFVWDTD-GRQLYSSLTH-----------DHPISSLAWAPGGDMFAVGS 185 (323)
Q Consensus 123 ~~v~~~~~~~----~~~~l~~~~~-d~~i~~i~v~d~~-~~~~~~~~~~-----------~~~v~~~~~~p~~~~l~~~~ 185 (323)
..+..++|+| ||+++++++. +++|. +||.. .+.+..+..+ ...+..+.++|++..+++..
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~---v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFA---IMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEE---EEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEE---EEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 6689999999 9999999885 89999 99985 5566555432 23688999999887766665
Q ss_pred C-C-eEEEEeCCCC-eee-ecCCCCccEEEEEEcCCCCEEEEEec-Cc-EEEEEcCCCceeeeecCC--CCccceEEEEE
Q psy11524 186 Y-N-TLRLCDKVGW-SHS-LDKPDTGSVYDLVWSNDATQIAGACA-NV-IHIFDISSSSSSNVTAPL--SHSHEITQLAV 257 (323)
Q Consensus 186 ~-~-~i~i~d~~~~-~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d~-i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~ 257 (323)
. + .|.+||.... .+. ....+...+..+.|+|+|+++++++. ++ |.+||..+++++..+... .|.+....+ +
T Consensus 299 ~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~ 377 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-V 377 (543)
T ss_dssp TTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-E
T ss_pred CCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-C
Confidence 5 4 9999998743 211 12235567889999999998876654 66 999999999988774221 143333333 4
Q ss_pred ccCCCCccceEEEEe-CCCCeEEEeccc-------c----cCCCCccceeEEEEeeCCCeeEeee-------cCCeEEEE
Q psy11524 258 NQTGSLQERHVAFID-KNRDLYLSMWSH-------S----LDKPDTGSVYDLVWSSDATQIAGAC-------ANGSLLLG 318 (323)
Q Consensus 258 ~p~g~~~d~~l~~~~-~~~~~~~~~~~~-------~----~~~~~~~~v~~~~~s~~g~~l~s~~-------~dg~i~~~ 318 (323)
+|++. ..+++.. .++.+.+|+... . ..+.|...+..++++|+|++|++++ .+++|.+|
T Consensus 378 ~p~~g---~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~ 454 (543)
T 1nir_A 378 HPKYG---PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVF 454 (543)
T ss_dssp ETTTE---EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEE
T ss_pred CCCCc---cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEE
Confidence 67741 2223332 345666666654 1 2334567788899999999999987 37899999
Q ss_pred Eee
Q psy11524 319 TII 321 (323)
Q Consensus 319 ~l~ 321 (323)
++.
T Consensus 455 d~~ 457 (543)
T 1nir_A 455 DLK 457 (543)
T ss_dssp ETT
T ss_pred ECC
Confidence 975
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.90 E-value=1.1e-22 Score=169.49 Aligned_cols=235 Identities=11% Similarity=0.007 Sum_probs=166.1
Q ss_pred ceeeecCCCC---CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeec-c----CCCeEEEEECCCCCEEEEEc-
Q psy11524 73 SLCRTLNVSP---PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQA-H----DGLILKVAWCSSTDLILSGG- 141 (323)
Q Consensus 73 ~~~~~~~~~~---~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~-~----~~~v~~~~~~~~~~~l~~~~- 141 (323)
+..+.+.... .+..++|+|+|+++++++..++.|++||..+. ...+.. + ...+..++|+|+|+++++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 101 (337)
T 1pby_B 22 AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYES 101 (337)
T ss_dssp EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEE
T ss_pred cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEec
Confidence 3444444444 58899999999988877766679999998655 333332 1 12567899999999988886
Q ss_pred -----------CCCceEeeeEEeCCCCee-eEeecCCCceeEEEEecCCCEEEEEeCCeEEEEeCCCCeee-ecCCCCcc
Q psy11524 142 -----------EDCKYKASFVWDTDGRQL-YSSLTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHS-LDKPDTGS 208 (323)
Q Consensus 142 -----------~d~~i~~i~v~d~~~~~~-~~~~~~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~~~~-~~~~~~~~ 208 (323)
.++.|. +||+.+... ..+. ....+.+++|+|+|++++++ .+.|++||+.+.... ....+. .
T Consensus 102 ~~~~~~~~~~~~~~~i~---v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~-~~~i~~~d~~~~~~~~~~~~~~-~ 175 (337)
T 1pby_B 102 PVRLELTHFEVQPTRVA---LYDAETLSRRKAFE-APRQITMLAWARDGSKLYGL-GRDLHVMDPEAGTLVEDKPIQS-W 175 (337)
T ss_dssp EEEECSSCEEECCCEEE---EEETTTTEEEEEEE-CCSSCCCEEECTTSSCEEEE-SSSEEEEETTTTEEEEEECSTT-T
T ss_pred ccccccccccccCceEE---EEECCCCcEEEEEe-CCCCcceeEECCCCCEEEEe-CCeEEEEECCCCcEeeeeeccc-c
Confidence 578899 999975444 4443 35568889999999988887 458999998865433 332222 1
Q ss_pred EEEEEEcCCCCEEEEEecCc-------------------------EEEEEcCCCceeeeecCCCCccceEEEEEccCCCC
Q psy11524 209 VYDLVWSNDATQIAGACANV-------------------------IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSL 263 (323)
Q Consensus 209 v~~~~~~~~~~~l~~~~~d~-------------------------i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~ 263 (323)
...+.|+|+|++++..+.++ |.+||+.+++.. ...+..+...+..++|+|++
T Consensus 176 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg-- 252 (337)
T 1pby_B 176 EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAK-- 252 (337)
T ss_dssp TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTS--
T ss_pred CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCC--
Confidence 11337899998776655433 379999988775 32244555678899999998
Q ss_pred ccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 264 QERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 264 ~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
+.+.+. ++.+.+|++... .... ...+.+++|+|+|++|++++.++.|.+|++.
T Consensus 253 --~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 253 --TRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp --SEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred --CEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 566555 466777776543 1111 3567899999999999999999999999974
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.90 E-value=2.2e-21 Score=162.75 Aligned_cols=234 Identities=10% Similarity=0.080 Sum_probs=171.4
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEeeC------CeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEE-EEcCCCceEe
Q psy11524 78 LNVSPPVYSAAWSPDSNKVLLTQAK------SLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLIL-SGGEDCKYKA 148 (323)
Q Consensus 78 ~~~~~~v~~~~~sp~~~~l~~~~~~------~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~ 148 (323)
......+..++|+|+|+++++++.. ++.|++||..+. ...+. ....+..++|+|+|++++ +...++.|.
T Consensus 37 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~v~~~~~~~v~- 114 (353)
T 3vgz_A 37 KAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH-NDLKPFGATINNTTQTLWFGNTVNSAVT- 114 (353)
T ss_dssp EEEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE-ESSCCCSEEEETTTTEEEEEETTTTEEE-
T ss_pred hhhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe-cCCCcceEEECCCCCEEEEEecCCCEEE-
Confidence 3456778999999999999888744 579999998765 33333 345577899999998555 455578999
Q ss_pred eeEEeCC-CCeeeEeecCCC---------ceeEEEEecCCCEEEEEe-C-C-eEEEEeCCCCeee-ecCCCCccEEEEEE
Q psy11524 149 SFVWDTD-GRQLYSSLTHDH---------PISSLAWAPGGDMFAVGS-Y-N-TLRLCDKVGWSHS-LDKPDTGSVYDLVW 214 (323)
Q Consensus 149 i~v~d~~-~~~~~~~~~~~~---------~v~~~~~~p~~~~l~~~~-~-~-~i~i~d~~~~~~~-~~~~~~~~v~~~~~ 214 (323)
+||.. ++.+..+..+.. .+.+++|+|+|+++++++ . + .|.+||..+.... ....+...+..++|
T Consensus 115 --~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (353)
T 3vgz_A 115 --AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLAL 192 (353)
T ss_dssp --EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEE
T ss_pred --EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEE
Confidence 99996 555555554332 268899999999887776 2 4 8999998865444 34335556889999
Q ss_pred cCCCCEEEEEecCc-EEEEEcCCCceeeeecCC--CCccceEEEEEccCCCCccceEEEEeCC-CCeEEEecccc----c
Q psy11524 215 SNDATQIAGACANV-IHIFDISSSSSSNVTAPL--SHSHEITQLAVNQTGSLQERHVAFIDKN-RDLYLSMWSHS----L 286 (323)
Q Consensus 215 ~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~--~~~~~v~~~~~~p~g~~~d~~l~~~~~~-~~~~~~~~~~~----~ 286 (323)
+|+|++|++++.++ |.+||..+++.+..+... ++...+..++|+|++ +.+.+.+.. +.+.+|+.... .
T Consensus 193 s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg----~~l~~~~~~~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 193 DSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTAR----QRAFITDSKAAEVLVVDTRNGNILAK 268 (353)
T ss_dssp ETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTT----TEEEEEESSSSEEEEEETTTCCEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCC----CEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 99999999999999 999999999887764221 244567889999998 666665544 66777777553 1
Q ss_pred CCCCccceeEEEEeeCCCeeEeee-cCCeEEEEEee
Q psy11524 287 DKPDTGSVYDLVWSSDATQIAGAC-ANGSLLLGTII 321 (323)
Q Consensus 287 ~~~~~~~v~~~~~s~~g~~l~s~~-~dg~i~~~~l~ 321 (323)
... .....++|+|+|++|+.+. .++.|.+|++.
T Consensus 269 ~~~--~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 269 VAA--PESLAVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp EEC--SSCCCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEc--CCCceEEECCCCCEEEEEECCCCeEEEEECC
Confidence 111 1225799999999666554 78999999874
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.90 E-value=1.3e-21 Score=179.28 Aligned_cols=220 Identities=10% Similarity=0.063 Sum_probs=160.8
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCC----
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG---- 156 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~---- 156 (323)
..|.+++|||| +.++++. + +.+++||..+. ...+..+...+.+++|+|||++|+++ .++.|. +|++.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~-~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~---v~~~~~~~~~ 154 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-Q-GGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLY---IARGGKLGEG 154 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-T-TEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEE---EEECBCTTSC
T ss_pred cCceeEEECCC-CeEEEEE-C-CEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEE---EEecCccccc
Confidence 67999999999 7777664 3 59999998766 55566677888899999999999985 678898 999965
Q ss_pred -CeeeEeec-CCCc--------------eeEEEEecCCCEEEEEe---------------------------------CC
Q psy11524 157 -RQLYSSLT-HDHP--------------ISSLAWAPGGDMFAVGS---------------------------------YN 187 (323)
Q Consensus 157 -~~~~~~~~-~~~~--------------v~~~~~~p~~~~l~~~~---------------------------------~~ 187 (323)
.....+.. .... +.+++|+|||++|++++ .+
T Consensus 155 ~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 155 MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 44444332 2222 48899999999999987 33
Q ss_pred -eEEEEeCCCCeeeecC---CCCccEEEEEEcCCCCEEEEEecC-----c-EEEEEcCCCceeeeecCCCCc---cceEE
Q psy11524 188 -TLRLCDKVGWSHSLDK---PDTGSVYDLVWSNDATQIAGACAN-----V-IHIFDISSSSSSNVTAPLSHS---HEITQ 254 (323)
Q Consensus 188 -~i~i~d~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d-----~-i~iwd~~~~~~~~~~~~~~~~---~~v~~ 254 (323)
.|++||+.+....... .+...+.+++|+|||++|++++.+ . |++||+.+++....+....+. ..+..
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 8999999876544332 456779999999999999887654 4 999999998433321011122 13467
Q ss_pred EEEcc--CCCCccceEEEEeCCCCeEEEeccc-c----cCCCCccceeE-EEEeeCCCeeEeeecC
Q psy11524 255 LAVNQ--TGSLQERHVAFIDKNRDLYLSMWSH-S----LDKPDTGSVYD-LVWSSDATQIAGACAN 312 (323)
Q Consensus 255 ~~~~p--~g~~~d~~l~~~~~~~~~~~~~~~~-~----~~~~~~~~v~~-~~~s~~g~~l~s~~~d 312 (323)
++|+| +| +.+.+.+.++...+|.+.. . ....|...+.+ ++|+|+|+.|+.++.+
T Consensus 315 ~~~sp~~dg----~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 315 LTFLPGSNN----QFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp CEECTTCSS----EEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred ceeecCCCC----EEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 89999 98 7777777888888887652 1 23344566776 8999999987755544
No 148
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.90 E-value=1.6e-22 Score=185.80 Aligned_cols=227 Identities=14% Similarity=0.135 Sum_probs=160.1
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCC---CeEEEEECCCCCEEEEEcCC---------CceE
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDG---LILKVAWCSSTDLILSGGED---------CKYK 147 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d---------~~i~ 147 (323)
..+.+++|+|||+++++ +.+ +.|++|+..+. ...+..|.. .|.+++|||||++|++++.+ +.+.
T Consensus 17 ~~~~~~~~spdg~~~~~-~~d-g~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~ 94 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQK-GTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYV 94 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSS-SCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEE
T ss_pred ccccccEEcCCCcEEEE-eCC-CCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEE
Confidence 45788999999997765 444 69999998765 334444543 48999999999999999875 5566
Q ss_pred eeeEEeCCCCeeeEeec---CCCceeEEEEecCCCEEEEEeCCeEEEEeCCCC-eeeecCCCCcc---------------
Q psy11524 148 ASFVWDTDGRQLYSSLT---HDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGW-SHSLDKPDTGS--------------- 208 (323)
Q Consensus 148 ~i~v~d~~~~~~~~~~~---~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~-~~~~~~~~~~~--------------- 208 (323)
+||+++.....+.. +...+..++|||||+.|++++.+.|++||+.+. .......+...
T Consensus 95 ---~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~ 171 (723)
T 1xfd_A 95 ---LSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEI 171 (723)
T ss_dssp ---EEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTT
T ss_pred ---EEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEe
Confidence 99997655554543 333488999999999999999889999998754 33333333332
Q ss_pred ---EEEEEEcCCCCEEEEEecC----------------------------------c-EEEEEcCCCceeeeecCCCC--
Q psy11524 209 ---VYDLVWSNDATQIAGACAN----------------------------------V-IHIFDISSSSSSNVTAPLSH-- 248 (323)
Q Consensus 209 ---v~~~~~~~~~~~l~~~~~d----------------------------------~-i~iwd~~~~~~~~~~~~~~~-- 248 (323)
+.+++|||||++|++++.+ . |++||+.+++.... +..+
T Consensus 172 ~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~--l~~~~~ 249 (723)
T 1xfd_A 172 LKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLE--MMPPDD 249 (723)
T ss_dssp SSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEE--CCCCCC
T ss_pred ccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEE--eeCCcc
Confidence 3789999999999988643 3 88999988876444 3433
Q ss_pred ----ccceEEEEEccCCCCccceEEEEeCC----CCeEEEecccc----cC-CCCccce----eEEEEeeCCCeeEe--e
Q psy11524 249 ----SHEITQLAVNQTGSLQERHVAFIDKN----RDLYLSMWSHS----LD-KPDTGSV----YDLVWSSDATQIAG--A 309 (323)
Q Consensus 249 ----~~~v~~~~~~p~g~~~d~~l~~~~~~----~~~~~~~~~~~----~~-~~~~~~v----~~~~~s~~g~~l~s--~ 309 (323)
...+..++|+||| +.++.+... ..+.+|++.+. +. ..+...+ ..++|||||+.|+. +
T Consensus 250 ~~~~~~~~~~~~~SpDg----~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 325 (723)
T 1xfd_A 250 PRMREYYITMVKWATST----KVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRA 325 (723)
T ss_dssp GGGSSEEEEEEEESSSS----EEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEE
T ss_pred CCCccceeEEEEEeCCC----eEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEe
Confidence 5678999999998 666555332 34566666543 11 1122333 37899999998775 4
Q ss_pred ecCC------eEEEEE
Q psy11524 310 CANG------SLLLGT 319 (323)
Q Consensus 310 ~~dg------~i~~~~ 319 (323)
..++ .|.+|+
T Consensus 326 ~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 326 IPQGGRGKFYHITVSS 341 (723)
T ss_dssp ECCSSSSCEEEEEEEC
T ss_pred cccCCCcceeEEEEEe
Confidence 5667 455555
No 149
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=6e-20 Score=154.74 Aligned_cols=231 Identities=6% Similarity=0.022 Sum_probs=159.7
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeC---CeEEEEeCCCC--c-ee---EeeccCCCeEEEEECCCCCEEEEEc-CCCceEee
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAK---SLVIKPLSPNN--K-AT---KWQAHDGLILKVAWCSSTDLILSGG-EDCKYKAS 149 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~---~~~v~~~~~~~--~-~~---~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~i 149 (323)
+...+..++|+|+|++|++++.+ .+.+.+|+... . .. ....+...+..+++ ++++|++++ .++.+.
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~-- 123 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSIT-- 123 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEE--
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEE--
Confidence 66778889999999999988773 36787776543 2 22 23335566778888 788777666 578899
Q ss_pred eEEeCC-CCeeeEe------ec--------CCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCe-------e------
Q psy11524 150 FVWDTD-GRQLYSS------LT--------HDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWS-------H------ 199 (323)
Q Consensus 150 ~v~d~~-~~~~~~~------~~--------~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~-------~------ 199 (323)
+|++. ...+..+ .+ +...+.+++|+|+|+++++++. + .+.+|++.... +
T Consensus 124 -~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~ 202 (361)
T 3scy_A 124 -VFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTP 202 (361)
T ss_dssp -EEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEE
T ss_pred -EEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccc
Confidence 99985 2222111 11 1234578999999998877776 4 99999876321 1
Q ss_pred -eecCCCCccEEEEEEcCCCCEEEEEe-cCc-EEEEEcCCCceee--eec-CCCCccceEEEEEccCCCCccceEEEEeC
Q psy11524 200 -SLDKPDTGSVYDLVWSNDATQIAGAC-ANV-IHIFDISSSSSSN--VTA-PLSHSHEITQLAVNQTGSLQERHVAFIDK 273 (323)
Q Consensus 200 -~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~-i~iwd~~~~~~~~--~~~-~~~~~~~v~~~~~~p~g~~~d~~l~~~~~ 273 (323)
.........+..++|+|+|+++++++ .++ |.+||+.+++... ... ...+......++|+|+| +.|.+.+.
T Consensus 203 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg----~~l~v~~~ 278 (361)
T 3scy_A 203 EAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDG----KYLYASNR 278 (361)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTS----SEEEEEEC
T ss_pred cceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCC----CEEEEECC
Confidence 22333456688999999999888877 467 9999998775422 210 22334456899999999 67766655
Q ss_pred C--CCeEEEeccc--c------cCCCCccceeEEEEeeCCCeeEeee-cCCeEEEEEe
Q psy11524 274 N--RDLYLSMWSH--S------LDKPDTGSVYDLVWSSDATQIAGAC-ANGSLLLGTI 320 (323)
Q Consensus 274 ~--~~~~~~~~~~--~------~~~~~~~~v~~~~~s~~g~~l~s~~-~dg~i~~~~l 320 (323)
. +.+.+|++.. . .... ...+.+++|+|||++|++++ .++.|.+|++
T Consensus 279 ~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 279 LKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp SSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 4 6678887741 1 1111 34678999999999888877 6799999876
No 150
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=2.5e-20 Score=155.08 Aligned_cols=227 Identities=8% Similarity=-0.009 Sum_probs=155.6
Q ss_pred EEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcC-CCceEeeeEEeCCC-Ce-eeE
Q psy11524 87 AAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGE-DCKYKASFVWDTDG-RQ-LYS 161 (323)
Q Consensus 87 ~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~~i~v~d~~~-~~-~~~ 161 (323)
..|.+++++++++...++.|.+||.... ...+..+...+ .++|+|+|+++++++. ++.|. +||+.. +. ...
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~---~~d~~~~~~~~~~ 78 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLV---QIETQLEPPKVVA 78 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEE---EEECSSSSCEEEE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEE---EEECCCCceeEEe
Confidence 4577778887766666679999998755 34445555566 9999999997766655 88888 999964 44 555
Q ss_pred eecCCCceeEEEEecCCCEEEEEeCC----eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEec--Cc-EEEEEc
Q psy11524 162 SLTHDHPISSLAWAPGGDMFAVGSYN----TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACA--NV-IHIFDI 234 (323)
Q Consensus 162 ~~~~~~~v~~~~~~p~~~~l~~~~~~----~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--d~-i~iwd~ 234 (323)
+..+..+..+++|+|+|++++++..+ .|.+||+.+............+.+++|+|+|++|++++. +. |.+|++
T Consensus 79 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 79 IQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp EEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred cccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 55555555559999999998865554 899999886544333334556799999999987666544 44 999998
Q ss_pred CCCceeeee--cCCCCccceEEEEEccCCCCccceEEEEe-CCCCeEEEecccccC---C---CCccceeEEEEeeCCCe
Q psy11524 235 SSSSSSNVT--APLSHSHEITQLAVNQTGSLQERHVAFID-KNRDLYLSMWSHSLD---K---PDTGSVYDLVWSSDATQ 305 (323)
Q Consensus 235 ~~~~~~~~~--~~~~~~~~v~~~~~~p~g~~~d~~l~~~~-~~~~~~~~~~~~~~~---~---~~~~~v~~~~~s~~g~~ 305 (323)
.....+... ...........++|+|+| +.+.+.+ .++.+.+|++..... . .....+..++|+|||++
T Consensus 159 ~~~g~~~~~~~~~~~~~~~~~~~~~spdg----~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 234 (331)
T 3u4y_A 159 DADGVLFDTGQEFISGGTRPFNITFTPDG----NFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGST 234 (331)
T ss_dssp CTTCCEEEEEEEEECSSSSEEEEEECTTS----SEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSE
T ss_pred CCCCcEeecCCccccCCCCccceEECCCC----CEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCE
Confidence 764433110 012334567899999998 5555544 456677787765311 0 02456788999999997
Q ss_pred eEee-ecCCeEEEEEee
Q psy11524 306 IAGA-CANGSLLLGTII 321 (323)
Q Consensus 306 l~s~-~~dg~i~~~~l~ 321 (323)
|+.+ ..++.|.+|++.
T Consensus 235 l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 235 VYVLTESTVDVFNFNQL 251 (331)
T ss_dssp EEEECSSEEEEEEEETT
T ss_pred EEEEEcCCCEEEEEECC
Confidence 7654 457889999864
No 151
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=3.7e-21 Score=165.74 Aligned_cols=194 Identities=14% Similarity=0.072 Sum_probs=142.5
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCC------------cee-----EeeccCCCeEEEEECCCCCEEE----E
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNN------------KAT-----KWQAHDGLILKVAWCSSTDLIL----S 139 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~------------~~~-----~~~~~~~~v~~~~~~~~~~~l~----~ 139 (323)
...+..+++++++.++++++.+ + +++|+... ... ....+...|.+++|+|+|++|+ +
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~d-g-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGAS-G-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETT-E-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCC-E-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 4568899999999999988666 4 66654211 011 1123567899999999999999 7
Q ss_pred EcCCCceEeeeEEeCCC---------Ce---eeEeecCCCceeEEEEecC-CCEEEEEeCC-eEEEEeCCCCe-eeecCC
Q psy11524 140 GGEDCKYKASFVWDTDG---------RQ---LYSSLTHDHPISSLAWAPG-GDMFAVGSYN-TLRLCDKVGWS-HSLDKP 204 (323)
Q Consensus 140 ~~~d~~i~~i~v~d~~~---------~~---~~~~~~~~~~v~~~~~~p~-~~~l~~~~~~-~i~i~d~~~~~-~~~~~~ 204 (323)
++.|+.|+ +||++. +. ...+.+|...|.+++|+|+ +.+|++++.| +|++||++... .....+
T Consensus 114 gs~d~~v~---iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~ 190 (434)
T 2oit_A 114 SEYGSIIA---FFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP 190 (434)
T ss_dssp TTTEEEEE---EEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC
T ss_pred cCCCceEE---EEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC
Confidence 88999999 999842 11 3445568899999999997 8899999996 99999988653 334456
Q ss_pred CCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCC-----CCccceEEEEEccCCCCccceEEEEe-CCCC-
Q psy11524 205 DTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPL-----SHSHEITQLAVNQTGSLQERHVAFID-KNRD- 276 (323)
Q Consensus 205 ~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~p~g~~~d~~l~~~~-~~~~- 276 (323)
|...+.+++|+|+|++|++++.|+ |++||.+ ++....+... .|...+.+++|++++ ..++.+. .+|.
T Consensus 191 ~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~----~~l~~~~~~dg~~ 265 (434)
T 2oit_A 191 STVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTY----VFAIVYAAADGTL 265 (434)
T ss_dssp GGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETT----EEEEEEEETTCCS
T ss_pred CCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCc----eEEEEEccCCCcc
Confidence 788999999999999999999999 9999998 5554442111 233489999999986 4554433 2221
Q ss_pred -----eEEEeccc
Q psy11524 277 -----LYLSMWSH 284 (323)
Q Consensus 277 -----~~~~~~~~ 284 (323)
+.+|++..
T Consensus 266 ~~~~~v~i~~l~~ 278 (434)
T 2oit_A 266 ETSPDVVMALLPK 278 (434)
T ss_dssp SSCCEEEEEECCC
T ss_pred CCCCceEEEEecc
Confidence 55666653
No 152
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=1.6e-19 Score=155.44 Aligned_cols=156 Identities=15% Similarity=0.203 Sum_probs=122.7
Q ss_pred CCCCCEEEEEEcCCCCeEEE---EeeCCeEEEEeCCCCc-------------eeEeeccCCCeEEEEECCC-CCEEEEEc
Q psy11524 79 NVSPPVYSAAWSPDSNKVLL---TQAKSLVIKPLSPNNK-------------ATKWQAHDGLILKVAWCSS-TDLILSGG 141 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~---~~~~~~~v~~~~~~~~-------------~~~~~~~~~~v~~~~~~~~-~~~l~~~~ 141 (323)
.+...|.+++|+|+|++|++ ++..++.|++||.... ...+.+|...|.+++|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 45678999999999999995 3445579999986432 2345678999999999998 78999999
Q ss_pred CCCceEeeeEEeCCCC-eeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeeecCC-------CCccEEEE
Q psy11524 142 EDCKYKASFVWDTDGR-QLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSLDKP-------DTGSVYDL 212 (323)
Q Consensus 142 ~d~~i~~i~v~d~~~~-~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~~~~-------~~~~v~~~ 212 (323)
.||+|+ +||++.. .......|...|.+++|+|+|++|++++.| .|++||.++........ |...+.++
T Consensus 170 ~Dg~v~---iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 170 ADGSIA---VLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp TTSCEE---EEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTTCCEEEEECCCTTCCTTSCEEEEEE
T ss_pred CCCeEE---EEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccCCcccccccCCcccCCCCceeEEEE
Confidence 999999 9999643 444556678899999999999999999996 99999998544333322 23479999
Q ss_pred EEcCCCCEEEEEe-cC------c-EEEEEcCCC
Q psy11524 213 VWSNDATQIAGAC-AN------V-IHIFDISSS 237 (323)
Q Consensus 213 ~~~~~~~~l~~~~-~d------~-i~iwd~~~~ 237 (323)
+|++++.++++.+ .+ . +++|++++.
T Consensus 247 ~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 247 LWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 9999988776543 22 2 889998865
No 153
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=2.8e-20 Score=155.26 Aligned_cols=221 Identities=11% Similarity=0.054 Sum_probs=154.2
Q ss_pred CCeEEEEeeCCeEEEEeCCC--Cc--eeEeeccCCCeEEEEECCCCCEEEEEcCC-CceEeeeEEeCC--CCee---eEe
Q psy11524 93 SNKVLLTQAKSLVIKPLSPN--NK--ATKWQAHDGLILKVAWCSSTDLILSGGED-CKYKASFVWDTD--GRQL---YSS 162 (323)
Q Consensus 93 ~~~l~~~~~~~~~v~~~~~~--~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~~i~v~d~~--~~~~---~~~ 162 (323)
++++++++..++.|++|+.. +. ......+...+..++|+|+|++|++++.+ +.|. +|+++ +... ..+
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~---~~~~~~~~~~~~~~~~~ 80 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVL---AYRIAPDDGALTFAAES 80 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEE---EEEECTTTCCEEEEEEE
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEE---EEEecCCCCceeecccc
Confidence 44566664555799999874 22 22334577788999999999988888876 8999 99986 3332 233
Q ss_pred ecCCCceeEEEEecCCCEEEEEeC-C-eEEEEeCC---CCeeeecCCCCccEEEEEEcCCCCEEEEEe-cCc-EEEEEcC
Q psy11524 163 LTHDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKV---GWSHSLDKPDTGSVYDLVWSNDATQIAGAC-ANV-IHIFDIS 235 (323)
Q Consensus 163 ~~~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~-i~iwd~~ 235 (323)
... ..+..++|+|+|+++++++. + .|.+||+. .............+.+++|+|+|++|++++ .++ |++||+.
T Consensus 81 ~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 81 ALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp ECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence 333 37899999999998888776 5 89999983 222222222344688999999999888887 777 9999998
Q ss_pred C-Cceeeee--c-CCCCccceEEEEEccCCCCccceEEEEe-CCCCeEEEeccc--c-------c--CC-CC--ccceeE
Q psy11524 236 S-SSSSNVT--A-PLSHSHEITQLAVNQTGSLQERHVAFID-KNRDLYLSMWSH--S-------L--DK-PD--TGSVYD 296 (323)
Q Consensus 236 ~-~~~~~~~--~-~~~~~~~v~~~~~~p~g~~~d~~l~~~~-~~~~~~~~~~~~--~-------~--~~-~~--~~~v~~ 296 (323)
+ ++..... . .......+..++|+|++ +.+.+.+ .++.+.+|++.. . . .. .+ ...+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg----~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNE----QYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAAD 235 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEEECTTS----SEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEE
T ss_pred CCCceeeecccccccCCCCCcceEEECCCC----CEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccc
Confidence 7 6543210 0 12234578889999998 5565554 566777887743 1 0 11 11 235668
Q ss_pred EEEeeCCCeeE-eeecCCeEEEEEee
Q psy11524 297 LVWSSDATQIA-GACANGSLLLGTII 321 (323)
Q Consensus 297 ~~~s~~g~~l~-s~~~dg~i~~~~l~ 321 (323)
++|+|+|++|+ ++..++.|.+|++.
T Consensus 236 i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 236 IHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eEECCCCCEEEEEecCCCEEEEEEEc
Confidence 99999999877 55579999999985
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.88 E-value=1e-20 Score=160.94 Aligned_cols=275 Identities=12% Similarity=0.045 Sum_probs=172.9
Q ss_pred eEeecccceeEe-----eEeccCCcceeeeee-cc---cc--cc-ccceeeecC-CCCCEEEEEEcCCCCeEEEEeeCCe
Q psy11524 38 LTIRRYDGTVIN-----YPISPYISVLHSYAA-SH---SW--PQ-ALSLCRTLN-VSPPVYSAAWSPDSNKVLLTQAKSL 104 (323)
Q Consensus 38 ~~~~~~~~~v~~-----~~~~~~~~~~~~~~~-~~---~~--~~-~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~~ 104 (323)
..+..|...... ..|+|||+.++.... .+ .| |. +.+..+... +...+..+.|+|||+.|+++..+ .
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~-~ 102 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG-R 102 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT-T
T ss_pred EEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC-C
Confidence 344555555555 789999987765544 33 22 32 222233332 33444567899999999998766 4
Q ss_pred EEEEeCCCCc-e-eEeeccCCCeEEEE--ECCCCCEEEEEc----------------------CCCceEeeeEEeCCCCe
Q psy11524 105 VIKPLSPNNK-A-TKWQAHDGLILKVA--WCSSTDLILSGG----------------------EDCKYKASFVWDTDGRQ 158 (323)
Q Consensus 105 ~v~~~~~~~~-~-~~~~~~~~~v~~~~--~~~~~~~l~~~~----------------------~d~~i~~i~v~d~~~~~ 158 (323)
.+++|+..+. . .....+...+.... ++|++++++... .+..|. +||+.+..
T Consensus 103 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~d~~~g~ 179 (388)
T 3pe7_A 103 NLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLM---RVDLKTGE 179 (388)
T ss_dssp EEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEE---EEETTTCC
T ss_pred eEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEE---EEECCCCc
Confidence 8999998766 2 23334444443343 489999887432 234455 99998667
Q ss_pred eeEeecCCCceeEEEEec-CCCEEEEEeC------C-eEEEEeCCCCeeeecCCCC--ccEEEEEEcCCCCEEEEEec--
Q psy11524 159 LYSSLTHDHPISSLAWAP-GGDMFAVGSY------N-TLRLCDKVGWSHSLDKPDT--GSVYDLVWSNDATQIAGACA-- 226 (323)
Q Consensus 159 ~~~~~~~~~~v~~~~~~p-~~~~l~~~~~------~-~i~i~d~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~-- 226 (323)
...+..+...+..++|+| ||+.|+.... . .|.++|..+.....+..+. ..+..++|+|||+.|+..+.
T Consensus 180 ~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (388)
T 3pe7_A 180 STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLK 259 (388)
T ss_dssp EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCC
Confidence 777777777899999999 9999887764 2 7888888766555554444 35788999999998866543
Q ss_pred ---Cc-EEEEEcCCCceeeeecCCCCccc---eEEEEEccCCCCccceEEEE---------eCCCCeEEEecccc---cC
Q psy11524 227 ---NV-IHIFDISSSSSSNVTAPLSHSHE---ITQLAVNQTGSLQERHVAFI---------DKNRDLYLSMWSHS---LD 287 (323)
Q Consensus 227 ---d~-i~iwd~~~~~~~~~~~~~~~~~~---v~~~~~~p~g~~~d~~l~~~---------~~~~~~~~~~~~~~---~~ 287 (323)
+. |++||+.+++......+..+... ...++|+|+| +.|++. ..+..+++|++... ..
T Consensus 260 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg----~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l 335 (388)
T 3pe7_A 260 GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDG----SDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRV 335 (388)
T ss_dssp TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEE----CCC------------CCCCEEEEEETTTTEEEEE
T ss_pred CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCC----CcceeEeeeccccccCCCCEEEEEeccCCceEEe
Confidence 23 89999998875432112221110 1123688988 333322 22334555555432 01
Q ss_pred CCCcc-----------ceeEEEEeeCCCeeEeee-cCCeEEEEEe
Q psy11524 288 KPDTG-----------SVYDLVWSSDATQIAGAC-ANGSLLLGTI 320 (323)
Q Consensus 288 ~~~~~-----------~v~~~~~s~~g~~l~s~~-~dg~i~~~~l 320 (323)
..|.. .+.+++|+|||+.|+..+ .+|...+|.+
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~ 380 (388)
T 3pe7_A 336 ARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLA 380 (388)
T ss_dssp EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEE
Confidence 11122 478899999999888555 5677777754
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=4e-21 Score=176.38 Aligned_cols=261 Identities=12% Similarity=0.030 Sum_probs=170.6
Q ss_pred eeEeccCCcceeeeeecc---cccc-ccceeeecCCC----CCEEEEEEcCCCCeEEEEeeC--------CeEEEEeCCC
Q psy11524 49 NYPISPYISVLHSYAASH---SWPQ-ALSLCRTLNVS----PPVYSAAWSPDSNKVLLTQAK--------SLVIKPLSPN 112 (323)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~----~~v~~~~~sp~~~~l~~~~~~--------~~~v~~~~~~ 112 (323)
++.|+|+|+.++.. .++ .|+. +.+....+.+. ..+.+++|||||++|++++.. ++.|++|+..
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 67899998433211 111 2332 22222333322 248999999999999998762 3689999987
Q ss_pred Ccee-EeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEee--cCCCce-----------------eEE
Q psy11524 113 NKAT-KWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSL--THDHPI-----------------SSL 172 (323)
Q Consensus 113 ~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~--~~~~~v-----------------~~~ 172 (323)
+... ........+..++|||||+.|+++. ++.|+ +|++.+.....+. ++...+ .++
T Consensus 99 ~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~---~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 99 NGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIY---LKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp TTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEE---EESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred CCccccceecCcccccceECCCCCEEEEEE-CCeEE---EEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccE
Confidence 6632 0011235688999999999999886 77888 9999654444432 222212 489
Q ss_pred EEecCCCEEEEEeCC-----------------------------------eEEEEeCCCCee----ee-----cCCCCcc
Q psy11524 173 AWAPGGDMFAVGSYN-----------------------------------TLRLCDKVGWSH----SL-----DKPDTGS 208 (323)
Q Consensus 173 ~~~p~~~~l~~~~~~-----------------------------------~i~i~d~~~~~~----~~-----~~~~~~~ 208 (323)
+|||||++|++++.+ .|++||+.+... .. +..+...
T Consensus 175 ~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 254 (719)
T 1z68_A 175 WWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY 254 (719)
T ss_dssp EECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce
Confidence 999999999988742 688999886532 21 2247778
Q ss_pred EEEEEEcCCCCEEEEEec--C--c-EEEEE----cCCCceeeeecC----CCCccceE-----EEEEccCCCCccceEEE
Q psy11524 209 VYDLVWSNDATQIAGACA--N--V-IHIFD----ISSSSSSNVTAP----LSHSHEIT-----QLAVNQTGSLQERHVAF 270 (323)
Q Consensus 209 v~~~~~~~~~~~l~~~~~--d--~-i~iwd----~~~~~~~~~~~~----~~~~~~v~-----~~~~~p~g~~~d~~l~~ 270 (323)
+..++|+||++++++... + . |++|| ..+++.... . ..+...+. .++|+|+| +.+.+
T Consensus 255 ~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~spdg----~~l~~ 328 (719)
T 1z68_A 255 FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKT--QEHIEESRTGWAGGFFVSTPVFSYDA----ISYYK 328 (719)
T ss_dssp EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGG--GEEEEECSSSCSSSSSCCCCEECTTS----SCEEE
T ss_pred EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEE--EecccccCCceEccccCCccEECCCC----CeEEE
Confidence 999999999887776442 2 3 88899 777776554 3 35556665 78999998 65554
Q ss_pred --EeCCCC--eEEEecccc---cCCCCccceeEEEEeeCCCeeEeeecC-----CeEEEEEee
Q psy11524 271 --IDKNRD--LYLSMWSHS---LDKPDTGSVYDLVWSSDATQIAGACAN-----GSLLLGTII 321 (323)
Q Consensus 271 --~~~~~~--~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~s~~~d-----g~i~~~~l~ 321 (323)
.+.++. +.+|++... ....+...+..+.++ +++.|+..+.+ +..++|.+.
T Consensus 329 ~~~~~~g~~~l~~~~~~~~~~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 329 IFSDKDGYKHIHYIKDTVENAIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp EEECTTSCEEEEEESSCSTTCEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred EEEccCCceEEEEEECCCCceEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 334444 444444332 122234567788877 88877766554 888898864
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=2.8e-21 Score=177.36 Aligned_cols=222 Identities=18% Similarity=0.177 Sum_probs=154.4
Q ss_pred EEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeeccC-C---CeEEEEECCCCCEEEEEcC---------CCceEeee
Q psy11524 85 YSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQAHD-G---LILKVAWCSSTDLILSGGE---------DCKYKASF 150 (323)
Q Consensus 85 ~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~-~---~v~~~~~~~~~~~l~~~~~---------d~~i~~i~ 150 (323)
.+++|+|+|++++ .+.+ +.|++|+..+. ...+..+. . .+.+++|||||++|++++. ++.|+
T Consensus 19 ~~~~~s~dg~~~~-~~~d-~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~--- 93 (719)
T 1z68_A 19 FFPNWISGQEYLH-QSAD-NNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY--- 93 (719)
T ss_dssp CCCEESSSSEEEE-ECTT-SCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE---
T ss_pred CccEECCCCeEEE-EcCC-CCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEE---
Confidence 3789999996554 4444 68999998765 33443332 2 3889999999999998876 67788
Q ss_pred EEeCCCCee---eEeecCCCceeEEEEecCCCEEEEEeCCeEEEEeCCCCeeeec--CCCCccE----------------
Q psy11524 151 VWDTDGRQL---YSSLTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHSLD--KPDTGSV---------------- 209 (323)
Q Consensus 151 v~d~~~~~~---~~~~~~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~~~~~~--~~~~~~v---------------- 209 (323)
+||+++... ..+ ...+..++|||||+.|+++..+.|++||+.+.....+ .++...+
T Consensus 94 ~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~ 170 (719)
T 1z68_A 94 IYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLAT 170 (719)
T ss_dssp EEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCS
T ss_pred EEECCCCccccceec---CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccC
Confidence 999986655 333 3568899999999999999877999999875433322 2222222
Q ss_pred -EEEEEcCCCCEEEEEecC----------------------------------c-EEEEEcCCCcee---eee---cCCC
Q psy11524 210 -YDLVWSNDATQIAGACAN----------------------------------V-IHIFDISSSSSS---NVT---APLS 247 (323)
Q Consensus 210 -~~~~~~~~~~~l~~~~~d----------------------------------~-i~iwd~~~~~~~---~~~---~~~~ 247 (323)
.+++|||||++|++++.| . |++||+.+++.. ... .+.+
T Consensus 171 ~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~ 250 (719)
T 1z68_A 171 KYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIAS 250 (719)
T ss_dssp SCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHT
T ss_pred cccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCC
Confidence 489999999999988754 2 779999887653 110 0225
Q ss_pred CccceEEEEEccCCCCccceEEEEeCCC----CeEEEe----cccc----cC----CCCcccee-----EEEEeeCCCee
Q psy11524 248 HSHEITQLAVNQTGSLQERHVAFIDKNR----DLYLSM----WSHS----LD----KPDTGSVY-----DLVWSSDATQI 306 (323)
Q Consensus 248 ~~~~v~~~~~~p~g~~~d~~l~~~~~~~----~~~~~~----~~~~----~~----~~~~~~v~-----~~~~s~~g~~l 306 (323)
+...+..++|+||+ ..+..+.... .+.+|+ ..++ +. ..|...+. .++|+|||+.|
T Consensus 251 ~~~~~~~~~~SpD~----~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l 326 (719)
T 1z68_A 251 SDYYFSWLTWVTDE----RVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISY 326 (719)
T ss_dssp SCEEEEEEEESSSS----EEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCE
T ss_pred CcceEEEeEEeCCC----eEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeE
Confidence 77789999999997 6666654332 266677 4433 22 34556666 89999999966
Q ss_pred Ee--eecCCeEEEE
Q psy11524 307 AG--ACANGSLLLG 318 (323)
Q Consensus 307 ~s--~~~dg~i~~~ 318 (323)
+. ...+|...+|
T Consensus 327 ~~~~~~~~g~~~l~ 340 (719)
T 1z68_A 327 YKIFSDKDGYKHIH 340 (719)
T ss_dssp EEEEECTTSCEEEE
T ss_pred EEEEEccCCceEEE
Confidence 54 4456654444
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=1.4e-19 Score=152.78 Aligned_cols=233 Identities=9% Similarity=-0.005 Sum_probs=158.8
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCC-C-ceeEeeccC--CCeEEEEECCCCCE--EEEEc------------
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPN-N-KATKWQAHD--GLILKVAWCSSTDL--ILSGG------------ 141 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~-~-~~~~~~~~~--~~v~~~~~~~~~~~--l~~~~------------ 141 (323)
....+..++|+|+|++|++++.+ .+.+|+.. . ....+..+. +.+..++|+|||++ +++++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~--~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK--KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT--EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCCCcEEEECCCCCEEEEEccc--eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 34568889999999999887665 78899874 3 332222221 33556899999994 55553
Q ss_pred -CCCceEeeeEEeCC--CCeeeEee----cCCCceeEEEEecCCCEEEEEeC--CeEEEEeCC-CCeee---ecC--CCC
Q psy11524 142 -EDCKYKASFVWDTD--GRQLYSSL----THDHPISSLAWAPGGDMFAVGSY--NTLRLCDKV-GWSHS---LDK--PDT 206 (323)
Q Consensus 142 -~d~~i~~i~v~d~~--~~~~~~~~----~~~~~v~~~~~~p~~~~l~~~~~--~~i~i~d~~-~~~~~---~~~--~~~ 206 (323)
.++.+. +|+++ ++....+. .+...+.+++|+|||++++++.. +.|++||+. +.... ... .+.
T Consensus 116 ~~~g~v~---v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g 192 (365)
T 1jof_A 116 KFAGYGN---VFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPG 192 (365)
T ss_dssp SSCCEEE---EEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTT
T ss_pred cCCceEE---EEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCC
Confidence 688999 99985 44433333 24567899999999999888775 399999986 43322 121 235
Q ss_pred ccEEEEEEcCCCCEEEEEec-Cc-EEEEEcC--CCceee---eec-CCC----Ccc------ceEEEE-EccCCCCccce
Q psy11524 207 GSVYDLVWSNDATQIAGACA-NV-IHIFDIS--SSSSSN---VTA-PLS----HSH------EITQLA-VNQTGSLQERH 267 (323)
Q Consensus 207 ~~v~~~~~~~~~~~l~~~~~-d~-i~iwd~~--~~~~~~---~~~-~~~----~~~------~v~~~~-~~p~g~~~d~~ 267 (323)
..+..++|+|+|++|++++. ++ |.+|++. +++... .+. +.. +.. .+..++ |+|+| +.
T Consensus 193 ~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG----~~ 268 (365)
T 1jof_A 193 DHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG----KY 268 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS----SE
T ss_pred CCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCC----CE
Confidence 67999999999999988876 56 9999765 565421 111 221 121 588999 99999 66
Q ss_pred EEEEeCCC------CeEEEecc-cc-c------CCCCccceeEEEEee---CCCeeEeeecC-CeEEEEEee
Q psy11524 268 VAFIDKNR------DLYLSMWS-HS-L------DKPDTGSVYDLVWSS---DATQIAGACAN-GSLLLGTII 321 (323)
Q Consensus 268 l~~~~~~~------~~~~~~~~-~~-~------~~~~~~~v~~~~~s~---~g~~l~s~~~d-g~i~~~~l~ 321 (323)
|.+.+... .+.+|++. .+ . ...+...+..++|+| ||++|++++.+ +.|.+|++.
T Consensus 269 l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 269 MFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp EEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred EEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 66554332 57777764 22 1 111244567899999 89999988764 899999874
No 158
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.86 E-value=7.4e-20 Score=166.39 Aligned_cols=269 Identities=10% Similarity=0.009 Sum_probs=176.6
Q ss_pred eecccceeEeeEeccCCcceeeeeecc--cccccccee---------eecCCCCCEE---------EEEEc--CCCCe-E
Q psy11524 40 IRRYDGTVINYPISPYISVLHSYAASH--SWPQALSLC---------RTLNVSPPVY---------SAAWS--PDSNK-V 96 (323)
Q Consensus 40 ~~~~~~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---------~~~~~~~~v~---------~~~~s--p~~~~-l 96 (323)
+.+|...+..+.+++++. +.... ..+....++ +...+...+. ...|+ |||++ |
T Consensus 19 ~~~~~~~~~~~~~s~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 19 VASRSGRPACVGAVGDEV----WWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHTCSCCEEEEEETTEE----EEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HhhcCCccceeEEcCCeE----EEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEE
Confidence 346777888888887652 22222 222222222 2223444555 56565 99999 8
Q ss_pred EEEeeCCeEEEEeCCC----CceeEeec-----cCCCeEEEEECCCCCEEEEEcCC-------CceEeeeEEeCCC----
Q psy11524 97 LLTQAKSLVIKPLSPN----NKATKWQA-----HDGLILKVAWCSSTDLILSGGED-------CKYKASFVWDTDG---- 156 (323)
Q Consensus 97 ~~~~~~~~~v~~~~~~----~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d-------~~i~~i~v~d~~~---- 156 (323)
+++......|++++.. +....+.. |...+..++|+|||+.|++++.+ .....|++||+++
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred EEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 8877656789999987 55666665 66788999999999999988876 2222344999987
Q ss_pred --CeeeEee-cCCCceeEEEEecCCCEEEEEeC--------C-eEEEEeCC-CC---eee-ecCCCCccEEEEEEcCCCC
Q psy11524 157 --RQLYSSL-THDHPISSLAWAPGGDMFAVGSY--------N-TLRLCDKV-GW---SHS-LDKPDTGSVYDLVWSNDAT 219 (323)
Q Consensus 157 --~~~~~~~-~~~~~v~~~~~~p~~~~l~~~~~--------~-~i~i~d~~-~~---~~~-~~~~~~~~v~~~~~~~~~~ 219 (323)
.....+. .+...+..++|||||++|++++. . .|++||+. +. ... ....+...+..++|+|||+
T Consensus 175 ~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~ 254 (662)
T 3azo_A 175 DRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS 254 (662)
T ss_dssp CGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC
T ss_pred cCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe
Confidence 6667776 66677888999999999987763 2 69999987 33 333 3334567899999999999
Q ss_pred EEEEEecCc---EEEEEcCCCceeeeecCCCCccc--------eEEEEEccCCCCccceEEEEeCCCCeEEEecc--cc-
Q psy11524 220 QIAGACANV---IHIFDISSSSSSNVTAPLSHSHE--------ITQLAVNQTGSLQERHVAFIDKNRDLYLSMWS--HS- 285 (323)
Q Consensus 220 ~l~~~~~d~---i~iwd~~~~~~~~~~~~~~~~~~--------v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~--~~- 285 (323)
+++++..++ |++||..+++.... ...+... +..++|+|++ ..+..... +...+|.+. ..
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l--~~~~~~~~~p~w~~~~~~~~~~~~~----~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQL--CRREEEFAGPLWTPGMRWFAPLANG----LIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEES--SCCSSBSSCCCCSTTCCSEEECTTS----CEEEEEBS-SSCEEEEEETTTTE
T ss_pred EEEEECCCCCeEEEEEECCCCceeec--ccccccccCccccccCceEeEeCCC----EEEEEEEc-CccEEEEEECCCCc
Confidence 777777776 55556656665443 2222221 4568888887 77777777 888888443 22
Q ss_pred --cCCCCccceeEEEEeeCCC--eeEeeecCCeEEEEEe
Q psy11524 286 --LDKPDTGSVYDLVWSSDAT--QIAGACANGSLLLGTI 320 (323)
Q Consensus 286 --~~~~~~~~v~~~~~s~~g~--~l~s~~~dg~i~~~~l 320 (323)
....|...+..+ |+++++ .+++++.+....+|.+
T Consensus 328 ~~~l~~~~~~~~~~-~s~~~~~~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 328 LVDAAGPWTEWAAT-LTVSGTRAVGVAASPRTAYEVVEL 365 (662)
T ss_dssp EEECCSSCCEEEEE-EEEETTEEEEEEEETTEEEEEEEE
T ss_pred EEEecCCCCeEEEE-EecCCCEEEEEEcCCCCCCEEEEE
Confidence 233445566666 145554 3445565655555543
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=9e-20 Score=152.59 Aligned_cols=221 Identities=9% Similarity=-0.024 Sum_probs=153.4
Q ss_pred EEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccC-CCeEEEEECCCCCEEE-EEcCCCceEeeeEEeCCC-Ceee
Q psy11524 86 SAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHD-GLILKVAWCSSTDLIL-SGGEDCKYKASFVWDTDG-RQLY 160 (323)
Q Consensus 86 ~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~-~~v~~~~~~~~~~~l~-~~~~d~~i~~i~v~d~~~-~~~~ 160 (323)
.++++++++.+++++.+ +.|++||..+. ...+..+. ..+..++|+|+|++++ +...++.|. +||+.+ +...
T Consensus 4 g~~~~~~~~~~v~~~~~-~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~---~~d~~t~~~~~ 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYP-NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIY---GIDLDTCKNTF 79 (349)
T ss_dssp CCCCCTTCEEEEEEETT-TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEE---EEETTTTEEEE
T ss_pred cccccCCCEEEEEeCCC-CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEE---EEeCCCCcEEE
Confidence 45678888888777666 59999998765 33444332 2578899999998654 555788999 999964 4444
Q ss_pred EeecC------CCceeEEEEecCCCEEEEEe-------------CCeEEEEeCCCCe----eeecCCCCccEEEEEEcCC
Q psy11524 161 SSLTH------DHPISSLAWAPGGDMFAVGS-------------YNTLRLCDKVGWS----HSLDKPDTGSVYDLVWSND 217 (323)
Q Consensus 161 ~~~~~------~~~v~~~~~~p~~~~l~~~~-------------~~~i~i~d~~~~~----~~~~~~~~~~v~~~~~~~~ 217 (323)
.+... ...+..++|+|+|+++++++ .+.|.+||+.+.. .... .+...+.+++|+|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~d 158 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF-PMPRQVYLMRAADD 158 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE-ECCSSCCCEEECTT
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeec-cCCCcccceeECCC
Confidence 44422 22378899999999988887 3589999987521 1222 23446889999999
Q ss_pred CCEEEEEecCc-EEEEEcCCCceeeeecCCC-------------------------------------------------
Q psy11524 218 ATQIAGACANV-IHIFDISSSSSSNVTAPLS------------------------------------------------- 247 (323)
Q Consensus 218 ~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~------------------------------------------------- 247 (323)
|+ ++++ ++ |.+||..+++.+..+....
T Consensus 159 g~-l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 235 (349)
T 1jmx_B 159 GS-LYVA--GPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGY 235 (349)
T ss_dssp SC-EEEE--SSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEE
T ss_pred Cc-EEEc--cCcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeE
Confidence 99 5554 44 9999999988776532211
Q ss_pred -----------------CccceEEEEEcc-CCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCe
Q psy11524 248 -----------------HSHEITQLAVNQ-TGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQ 305 (323)
Q Consensus 248 -----------------~~~~v~~~~~~p-~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~ 305 (323)
+...+..++|+| ++ +.+.+. ++.+.+|++... .... ...+.+++|+|+|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg----~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~ 308 (349)
T 1jmx_B 236 LSVDLKTGKTHTQEFADLTELYFTGLRSPKDP----NQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDK 308 (349)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECSSCT----TEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSC
T ss_pred EEEeccCCcEEecccccCCCcceeeEecCCCC----CEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCE
Confidence 001234566778 77 555555 566777776553 1111 345789999999999
Q ss_pred eEeeecCCeEEEEEee
Q psy11524 306 IAGACANGSLLLGTII 321 (323)
Q Consensus 306 l~s~~~dg~i~~~~l~ 321 (323)
|++++.++.|.+|++.
T Consensus 309 l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 309 LYLGGTFNDLAVFNPD 324 (349)
T ss_dssp EEEESBSSEEEEEETT
T ss_pred EEEecCCCeEEEEecc
Confidence 9988899999999974
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=7e-20 Score=168.48 Aligned_cols=230 Identities=16% Similarity=0.123 Sum_probs=158.3
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCC-----CeEEEEECCCCCEEEEEcCCCce------Ee
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDG-----LILKVAWCSSTDLILSGGEDCKY------KA 148 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i------~~ 148 (323)
....+++|+|||++++++ + +.|++|+..+. ...+..|.. ....++|||||++|+.++.++++ ..
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~ 93 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--E-NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTAS 93 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--T-TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEE
T ss_pred ccccccEECCCCcEEEEc--C-CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceE
Confidence 346689999999888875 4 69999998765 333455543 22458899999999998876443 24
Q ss_pred eeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeCCeEEEEeCCCCeeeecC--CCCccE-----------------
Q psy11524 149 SFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHSLDK--PDTGSV----------------- 209 (323)
Q Consensus 149 i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~~~~~~~--~~~~~v----------------- 209 (323)
+++||+++..+..+..+...+..++|||||+.||.+.++.|++||+.+.....+. ++...+
T Consensus 94 ~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 94 YDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 4599998887777887888899999999999999998779999998754333222 222222
Q ss_pred EEEEEcCCCCEEEEEecC------------------------------------c-EEEEEcCC---C---ceeeeecCC
Q psy11524 210 YDLVWSNDATQIAGACAN------------------------------------V-IHIFDISS---S---SSSNVTAPL 246 (323)
Q Consensus 210 ~~~~~~~~~~~l~~~~~d------------------------------------~-i~iwd~~~---~---~~~~~~~~~ 246 (323)
..+.|||||++|+..+.| . |++||+.+ + +.... ..
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l--~~ 251 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI--TA 251 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE--CC
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe--cC
Confidence 358999999999987521 2 67788887 6 33322 11
Q ss_pred -----CCccceEEEEEccCCCCccceEEEEeCCC----CeEEEeccccc--------C----CCCcccee-----EEEEe
Q psy11524 247 -----SHSHEITQLAVNQTGSLQERHVAFIDKNR----DLYLSMWSHSL--------D----KPDTGSVY-----DLVWS 300 (323)
Q Consensus 247 -----~~~~~v~~~~~~p~g~~~d~~l~~~~~~~----~~~~~~~~~~~--------~----~~~~~~v~-----~~~~s 300 (323)
++...+..++|+||| +.++.+.... .+.+|++.++. . ..|...|. .++|+
T Consensus 252 ~~~~~~~~~~~~~~~wspdg----~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fs 327 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQE----RISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFT 327 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETT----EEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEEC
T ss_pred CccCCCCCeEEEEEEEeCCC----eEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEc
Confidence 267789999999998 5555443222 36667765422 1 22444444 78999
Q ss_pred eCCCeeE-eee-cCC--eEEEEEe
Q psy11524 301 SDATQIA-GAC-ANG--SLLLGTI 320 (323)
Q Consensus 301 ~~g~~l~-s~~-~dg--~i~~~~l 320 (323)
|||+.|+ ..+ .+| .|++|++
T Consensus 328 pDG~~l~~~~s~~~G~~~l~~~~~ 351 (740)
T 4a5s_A 328 LDGNSFYKIISNEEGYRHICYFQI 351 (740)
T ss_dssp TTSSEEEEEEECTTSCEEEEEEET
T ss_pred CCCCEEEEEEEcCCCceEEEEEEC
Confidence 9999877 555 444 4555554
No 161
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=9.3e-18 Score=139.48 Aligned_cols=237 Identities=13% Similarity=0.063 Sum_probs=164.7
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCC-----------------------eEEEEeCCCCc-eeE-ee-ccCCCeEEEEECCCC
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKS-----------------------LVIKPLSPNNK-ATK-WQ-AHDGLILKVAWCSST 134 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~-----------------------~~v~~~~~~~~-~~~-~~-~~~~~v~~~~~~~~~ 134 (323)
-..+.+++++|+|+.+++...+. +.|.+||.... +.. +. .+-..+..++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 35677777777777665544331 36888988643 332 22 334578999999999
Q ss_pred CEEEEEcCCCceEeeeEEeCCCC--eeeEee---------cCCCceeEEEEec-CCCEEEEEe-CC-eEEEEeCCCCeee
Q psy11524 135 DLILSGGEDCKYKASFVWDTDGR--QLYSSL---------THDHPISSLAWAP-GGDMFAVGS-YN-TLRLCDKVGWSHS 200 (323)
Q Consensus 135 ~~l~~~~~d~~i~~i~v~d~~~~--~~~~~~---------~~~~~v~~~~~~p-~~~~l~~~~-~~-~i~i~d~~~~~~~ 200 (323)
+++++...++.|+ +|+.+++ .+..+. .+...+..++++| ++.++++.+ .+ .|++||..+....
T Consensus 103 ~l~v~d~~~~~v~---~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g~~~~ 179 (329)
T 3fvz_A 103 NYWVTDVALHQVF---KLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSGKFVT 179 (329)
T ss_dssp CEEEEETTTTEEE---EECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTSCEEE
T ss_pred CEEEEECCCCEEE---EEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCCCEEE
Confidence 9888888899999 9999876 455552 2334688999999 788877775 44 9999997776555
Q ss_pred ecCC----------CCccEEEEEEcCC-CCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEcc------CCC
Q psy11524 201 LDKP----------DTGSVYDLVWSND-ATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQ------TGS 262 (323)
Q Consensus 201 ~~~~----------~~~~v~~~~~~~~-~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p------~g~ 262 (323)
.+.. +-..+..++++|+ +.++++...++ |++||..+++.+..+....+...+..++|+| ++.
T Consensus 180 ~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~ 259 (329)
T 3fvz_A 180 QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK 259 (329)
T ss_dssp EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC
T ss_pred EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCC
Confidence 4321 2234889999998 66666666677 9999998898888754455667788999999 332
Q ss_pred -----CccceEEEEeCCCCeEEEecccccCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 263 -----LQERHVAFIDKNRDLYLSMWSHSLDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 263 -----~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
..+..+.+|+......+..+.. ...+...+.+++++|+|.++++...+++|++|++..
T Consensus 260 ~~v~~~~~~~v~~~~~~~g~~~~~~~~--~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 260 PYFGDQEPVQGFVMNFSSGEIIDVFKP--VRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCTTCSCCCCEEEEETTTCCEEEEECC--SSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EEeccCCCcEEEEEEcCCCeEEEEEcC--CCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 2223455555333222222211 123456789999999998888999999999999854
No 162
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=1e-18 Score=146.30 Aligned_cols=232 Identities=12% Similarity=0.056 Sum_probs=155.9
Q ss_pred cccceeEeeEeccCCcceeeeeec---c---cccc---ccceeee-cCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCC
Q psy11524 42 RYDGTVINYPISPYISVLHSYAAS---H---SWPQ---ALSLCRT-LNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSP 111 (323)
Q Consensus 42 ~~~~~v~~~~~~~~~~~~~~~~~~---~---~~~~---~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~ 111 (323)
.+......++|+|+|+ ++..... + .|+. ..+.... ..+...+..++|+|+|++|++++..++.+.+|+.
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 3456677899999997 4433321 1 2442 2222333 2367788999999999999988866678999987
Q ss_pred CC--cee---Eeec---------cCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEe---ec-CCCceeEE
Q psy11524 112 NN--KAT---KWQA---------HDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSS---LT-HDHPISSL 172 (323)
Q Consensus 112 ~~--~~~---~~~~---------~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~---~~-~~~~v~~~ 172 (323)
.. ... .+.. +...+.+++|+|||+++++...++.|. +|+++ ...+... .. ....+..+
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~---~~~~~~~g~~~~~~~~~~~~g~~p~~~ 192 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVY---VYNVSDAGQLSEQSVLTMEAGFGPRHL 192 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEE---EEEECTTSCEEEEEEEECCTTCCEEEE
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEE---EEEECCCCcEEEeeeEEcCCCCCCceE
Confidence 52 222 2211 122488899999999666667788899 99996 3333222 22 23367889
Q ss_pred EEecCCCEEEEEeC-C-eEEEEeCCC--Ceee---ecCCCC------ccEEEEEEcCCCCEEEEE-ecCc-EEEEEcCC-
Q psy11524 173 AWAPGGDMFAVGSY-N-TLRLCDKVG--WSHS---LDKPDT------GSVYDLVWSNDATQIAGA-CANV-IHIFDISS- 236 (323)
Q Consensus 173 ~~~p~~~~l~~~~~-~-~i~i~d~~~--~~~~---~~~~~~------~~v~~~~~~~~~~~l~~~-~~d~-i~iwd~~~- 236 (323)
+|+|||+++++++. + .+.+|++.. .... ...... ..+..++|+|+|++|+++ ..++ |.+||+..
T Consensus 193 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~ 272 (347)
T 3hfq_A 193 VFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD 272 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG
T ss_pred EECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC
Confidence 99999998777665 4 999999763 2221 111111 458899999999988554 4567 99999873
Q ss_pred C--ceeeeecCCCCccceEEEEEccCCCCccceEEEEeCC-CCeEEEecc
Q psy11524 237 S--SSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKN-RDLYLSMWS 283 (323)
Q Consensus 237 ~--~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~-~~~~~~~~~ 283 (323)
+ +.+.. +..+...+..++|+|+| +.|++.+.+ +.+.+|.+.
T Consensus 273 g~~~~~~~--~~~~~~~~~~~~~spdg----~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 273 GHLTLIQQ--ISTEGDFPRDFDLDPTE----AFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp GCEEEEEE--EECSSSCCCEEEECTTS----SEEEEEETTTTEEEEEEEC
T ss_pred CcEEEeEE--EecCCCCcCeEEECCCC----CEEEEEEcCCCcEEEEEEe
Confidence 2 33333 34445568899999999 788887765 678888654
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.83 E-value=4.2e-17 Score=132.72 Aligned_cols=233 Identities=10% Similarity=0.070 Sum_probs=160.2
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEee------ccCCCeEEEEE-CCCCCEEEEEcC-CCceEeee
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQ------AHDGLILKVAW-CSSTDLILSGGE-DCKYKASF 150 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~------~~~~~v~~~~~-~~~~~~l~~~~~-d~~i~~i~ 150 (323)
+-..+.+++++|+|+.+++...+ +.|.+|+..+. ...+. .+...+..+++ .++++++++... ++.|.
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~-~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~--- 103 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNN-HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQ--- 103 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGG-TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEE---
T ss_pred ccCCCceEEECCCCCEEEEECCC-CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEE---
Confidence 45678999999999866654444 58999998765 33332 23357889999 577777666643 78899
Q ss_pred EEeCCCCeeeEeec-CCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeeecC--CCCccEEEEEEcCCCCEEEEEec
Q psy11524 151 VWDTDGRQLYSSLT-HDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSLDK--PDTGSVYDLVWSNDATQIAGACA 226 (323)
Q Consensus 151 v~d~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~ 226 (323)
+||.+++.+..+.. ....+.+++++|+|+++++...+ .|++||..+....... .+...+..++++|+|+++++...
T Consensus 104 ~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 104 IYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp EECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred EECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 99987777766643 33568999999999877666554 9999998776554432 34456899999999987777777
Q ss_pred Cc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCC-CeEEEecccc---c--CCCCccceeEEEE
Q psy11524 227 NV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNR-DLYLSMWSHS---L--DKPDTGSVYDLVW 299 (323)
Q Consensus 227 d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~-~~~~~~~~~~---~--~~~~~~~v~~~~~ 299 (323)
++ |++||. +++.+..+...++...+..++++|+|. .+..-..++ .+.+|+.... . .......+.++++
T Consensus 184 ~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~----l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~ 258 (286)
T 1q7f_A 184 AHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGE----ILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVAL 258 (286)
T ss_dssp GTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCC----EEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEE
T ss_pred CCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCC----EEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEE
Confidence 78 999996 455555521223335788999999973 222222222 4555543321 0 0111234779999
Q ss_pred eeCCCeeEeeecCCeEEEEEeec
Q psy11524 300 SSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 300 s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
+|+|+++++ +.|++|++|++..
T Consensus 259 ~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 259 MDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp ETTTEEEEE-ETTTEEEEEECSC
T ss_pred CCCCcEEEE-CCCCeEEEEEccc
Confidence 999987777 6799999999753
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=8.9e-19 Score=159.29 Aligned_cols=245 Identities=10% Similarity=-0.038 Sum_probs=167.8
Q ss_pred cccccccceeeecCCCCCEEEEEEcCCCCeEEEEe-eCCeEEEEeC--CCCceeEeeccCCCeE---------EEEEC--
Q psy11524 66 HSWPQALSLCRTLNVSPPVYSAAWSPDSNKVLLTQ-AKSLVIKPLS--PNNKATKWQAHDGLIL---------KVAWC-- 131 (323)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~~~~~v~~~~--~~~~~~~~~~~~~~v~---------~~~~~-- 131 (323)
|+|......-....|...+..++|++++-+++... ..++...+|. ..+....+..+...+. ...|+
T Consensus 8 g~w~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~S 87 (662)
T 3azo_A 8 GAWQSPIDAALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPR 87 (662)
T ss_dssp TCCCCSCCHHHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECC
T ss_pred cCCCCCCCHHHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeee
Confidence 56654443333345889999999997755554431 1223555554 3334666776766655 56665
Q ss_pred CCCCE-EEEEcC-CCceEeeeEEeCC--C-CeeeEeec-----CCCceeEEEEecCCCEEEEEeCC-----------eEE
Q psy11524 132 SSTDL-ILSGGE-DCKYKASFVWDTD--G-RQLYSSLT-----HDHPISSLAWAPGGDMFAVGSYN-----------TLR 190 (323)
Q Consensus 132 ~~~~~-l~~~~~-d~~i~~i~v~d~~--~-~~~~~~~~-----~~~~v~~~~~~p~~~~l~~~~~~-----------~i~ 190 (323)
|||+. |+.++. +..|. ++++. + .....+.. +...+.+++|+|||+.|++++.+ .|+
T Consensus 88 PDg~~~la~~~~~~~~l~---~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~ 164 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLY---AFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLA 164 (662)
T ss_dssp SSSSCEEEEEBTTTCCEE---EECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEE
T ss_pred cCCCeEEEEEECCCCeEE---EEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEE
Confidence 99998 776654 44555 77776 4 66666665 56678899999999999887743 799
Q ss_pred EEeCCC------CeeeecC-CCCccEEEEEEcCCCCEEEEEecC--------c-EEEEEcC-CC---ceeeeecCCCCcc
Q psy11524 191 LCDKVG------WSHSLDK-PDTGSVYDLVWSNDATQIAGACAN--------V-IHIFDIS-SS---SSSNVTAPLSHSH 250 (323)
Q Consensus 191 i~d~~~------~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d--------~-i~iwd~~-~~---~~~~~~~~~~~~~ 250 (323)
+||+.+ .....+. .+...+..++|||||++|+.++.+ . |++||+. ++ +.... ...+..
T Consensus 165 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l--~~~~~~ 242 (662)
T 3azo_A 165 AVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTL--LGGPEE 242 (662)
T ss_dssp EEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEE--EEETTB
T ss_pred EEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEe--CCCCCc
Confidence 999887 5555555 566778899999999999877743 5 9999998 56 33332 234567
Q ss_pred ceEEEEEccCCCCccceEEEEeCCCC--eEEEecccc----cCCCCccc--------eeEEEEeeCCCeeEeeecCCeEE
Q psy11524 251 EITQLAVNQTGSLQERHVAFIDKNRD--LYLSMWSHS----LDKPDTGS--------VYDLVWSSDATQIAGACANGSLL 316 (323)
Q Consensus 251 ~v~~~~~~p~g~~~d~~l~~~~~~~~--~~~~~~~~~----~~~~~~~~--------v~~~~~s~~g~~l~s~~~dg~i~ 316 (323)
.+..++|+|+| +.+.+.+.++. +..++.... +...+... +..++|+|+++++++++. +.++
T Consensus 243 ~~~~~~~spdg----~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~ 317 (662)
T 3azo_A 243 AIAQAEWAPDG----SLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAV 317 (662)
T ss_dssp CEEEEEECTTS----CEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCE
T ss_pred eEcceEECCCC----eEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccE
Confidence 89999999998 66666666664 444443232 22222222 567899999999999998 9999
Q ss_pred EEEe
Q psy11524 317 LGTI 320 (323)
Q Consensus 317 ~~~l 320 (323)
+|.+
T Consensus 318 l~~~ 321 (662)
T 3azo_A 318 LGIL 321 (662)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9965
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.82 E-value=1.7e-18 Score=159.20 Aligned_cols=263 Identities=13% Similarity=0.079 Sum_probs=165.4
Q ss_pred eeEeeEeccCCcceeeeeecc---ccc-cccceeeecC-CC-----CCEEEEEEcCCCCeEEEEeeCC--------eEEE
Q psy11524 46 TVINYPISPYISVLHSYAASH---SWP-QALSLCRTLN-VS-----PPVYSAAWSPDSNKVLLTQAKS--------LVIK 107 (323)
Q Consensus 46 ~v~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~-~~-----~~v~~~~~sp~~~~l~~~~~~~--------~~v~ 107 (323)
...++.|+|||+.++.. ++ .|+ .+.+....+. |. .....++|||||++|++++.+. +.++
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 45578999999655442 22 244 2222223333 22 1234589999999999887642 5678
Q ss_pred EeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeec--CCCce---------------
Q psy11524 108 PLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLT--HDHPI--------------- 169 (323)
Q Consensus 108 ~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~--~~~~v--------------- 169 (323)
+||..++ ...+..+.+.+..++|||||+.||.+. ++.|+ +|++.+.....+.. +...+
T Consensus 96 ~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~---~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 96 IYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIY---VKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEE---EESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEE---EEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 9998876 556677888999999999999999885 67888 99997554444432 22112
Q ss_pred --eEEEEecCCCEEEEEeCC-------------------------------------eEEEEeCCC---C---eeeecC-
Q psy11524 170 --SSLAWAPGGDMFAVGSYN-------------------------------------TLRLCDKVG---W---SHSLDK- 203 (323)
Q Consensus 170 --~~~~~~p~~~~l~~~~~~-------------------------------------~i~i~d~~~---~---~~~~~~- 203 (323)
..+.|||||+.|++++.| .|++||+.+ . ....+.
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~ 251 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITA 251 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECC
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecC
Confidence 358999999999987521 478889876 4 333332
Q ss_pred -----CCCccEEEEEEcCCCCEEEEEec----Cc-EEEEEcCCCc----eeeeecC--CCCccceE-----EEEEccCCC
Q psy11524 204 -----PDTGSVYDLVWSNDATQIAGACA----NV-IHIFDISSSS----SSNVTAP--LSHSHEIT-----QLAVNQTGS 262 (323)
Q Consensus 204 -----~~~~~v~~~~~~~~~~~l~~~~~----d~-i~iwd~~~~~----~~~~~~~--~~~~~~v~-----~~~~~p~g~ 262 (323)
++...+..++|+|||+.++.... +. |++||+.+++ +....++ ..+...+. .++|+|||
T Consensus 252 ~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG- 330 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDG- 330 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTS-
T ss_pred CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCC-
Confidence 26677999999999997665432 33 9999999887 2221101 33444443 78899999
Q ss_pred CccceEE-EEe-CCCC--eEEEecccc----cCCCCccceeEEEEeeCCCeeE-eeec----CCeEEEEEe
Q psy11524 263 LQERHVA-FID-KNRD--LYLSMWSHS----LDKPDTGSVYDLVWSSDATQIA-GACA----NGSLLLGTI 320 (323)
Q Consensus 263 ~~d~~l~-~~~-~~~~--~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~-s~~~----dg~i~~~~l 320 (323)
+.++ ..+ .+|. +++|+.... +..+ ...+..+. .+|++.|+ ++.. .+...||.+
T Consensus 331 ---~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g-~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 331 ---NSFYKIISNEEGYRHICYFQIDKKDCTFITKG-TWEVIGIE-ALTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp ---SEEEEEEECTTSCEEEEEEETTCSSCEESCCS-SSCEEEEE-EECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred ---CEEEEEEEcCCCceEEEEEECCCCceEecccC-CEEEEEEE-EEeCCEEEEEEecCCCCCceeEEEEE
Confidence 6665 333 3443 445555443 2222 34455543 35566555 4433 244555554
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.82 E-value=1.3e-18 Score=147.87 Aligned_cols=225 Identities=9% Similarity=-0.012 Sum_probs=150.0
Q ss_pred EEEcCCCCeEEEEeeCCe--EEEEeCCCCc-eeEee-ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeee-E
Q psy11524 87 AAWSPDSNKVLLTQAKSL--VIKPLSPNNK-ATKWQ-AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLY-S 161 (323)
Q Consensus 87 ~~~sp~~~~l~~~~~~~~--~v~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~-~ 161 (323)
.+|||||++|++++..++ .|++|+..+. ...+. .+...+..+.|+|||+.|+.++.++.+. +||+.+.... .
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~---~~d~~~g~~~~~ 117 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLM---RVDLATLEENVV 117 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEE---EEETTTCCEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEE---EEECCCCcceee
Confidence 889999999999987444 5888988765 33443 3334444678999999999999998888 9999754433 3
Q ss_pred eecCCCceeEEE--EecCCCEEEEEe----------------------CC-eEEEEeCCCCeeeecCCCCccEEEEEEcC
Q psy11524 162 SLTHDHPISSLA--WAPGGDMFAVGS----------------------YN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSN 216 (323)
Q Consensus 162 ~~~~~~~v~~~~--~~p~~~~l~~~~----------------------~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~ 216 (323)
...+...+.... ++|+++.++... .+ .|++||+.+.....+..+...+..++|+|
T Consensus 118 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp 197 (388)
T 3pe7_A 118 YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRP 197 (388)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEET
T ss_pred eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECC
Confidence 343444443333 489999887432 23 79999988665555555667799999999
Q ss_pred -CCCEEEEEec------Cc-EEEEEcCCCceeeeecCCCCc--cceEEEEEccCCCCccceEEEE-eCCC--C--eEEEe
Q psy11524 217 -DATQIAGACA------NV-IHIFDISSSSSSNVTAPLSHS--HEITQLAVNQTGSLQERHVAFI-DKNR--D--LYLSM 281 (323)
Q Consensus 217 -~~~~l~~~~~------d~-i~iwd~~~~~~~~~~~~~~~~--~~v~~~~~~p~g~~~d~~l~~~-~~~~--~--~~~~~ 281 (323)
+|+.|+.... .. |.++|...++... +..+. ..+..++|+|+| +.|+.. ..++ . +++|+
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~---l~~~~~~~~~~~~~~spdg----~~l~~~~~~~~~~~~~l~~~d 270 (388)
T 3pe7_A 198 YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK---VKTHAEGESCTHEFWVPDG----SALVYVSYLKGSPDRFIYSAD 270 (388)
T ss_dssp TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE---SCCCCTTEEEEEEEECTTS----SCEEEEEEETTCCCEEEEEEC
T ss_pred CCCCEEEEEEecCCCCCcceEEEEeCCCCceEE---eeeCCCCcccccceECCCC----CEEEEEecCCCCCcceEEEEe
Confidence 9999887765 34 8888877665443 33333 367889999999 555443 2222 2 66777
Q ss_pred ccccc----CCCCc-----cceeEEEEeeCCCeeEee---------ecCCeEEEEEee
Q psy11524 282 WSHSL----DKPDT-----GSVYDLVWSSDATQIAGA---------CANGSLLLGTII 321 (323)
Q Consensus 282 ~~~~~----~~~~~-----~~v~~~~~s~~g~~l~s~---------~~dg~i~~~~l~ 321 (323)
+..+. ..... .....++|+|||+.|+.. ..+..|++|++.
T Consensus 271 ~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 271 PETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp TTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred cCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 65531 00000 001223799999988854 456689999864
No 167
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=8.5e-17 Score=135.40 Aligned_cols=246 Identities=8% Similarity=0.003 Sum_probs=160.5
Q ss_pred ccceeEeeEeccCCcceeeeeec----c---ccc--cc-c--ceeeecC-CCCCEEEEEEcCCCCeEEEEeeCCeEEEEe
Q psy11524 43 YDGTVINYPISPYISVLHSYAAS----H---SWP--QA-L--SLCRTLN-VSPPVYSAAWSPDSNKVLLTQAKSLVIKPL 109 (323)
Q Consensus 43 ~~~~v~~~~~~~~~~~~~~~~~~----~---~~~--~~-~--~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~ 109 (323)
+......++|+|+|+.++..... + .|+ .. . +...... +......+++ ++++|++++..++.+.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 56667789999999877654442 1 132 11 1 2222222 4567778888 899998887666799999
Q ss_pred CCCCc--ee---Eeecc-----------CCCeEEEEECCCCCEEEEEc-CCCceEeeeEEeCCCCe-------e------
Q psy11524 110 SPNNK--AT---KWQAH-----------DGLILKVAWCSSTDLILSGG-EDCKYKASFVWDTDGRQ-------L------ 159 (323)
Q Consensus 110 ~~~~~--~~---~~~~~-----------~~~v~~~~~~~~~~~l~~~~-~d~~i~~i~v~d~~~~~-------~------ 159 (323)
+.... +. ....+ ...+.+++|+|||+++++++ .++.|. +|+++... +
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~---v~~~~~~~~~~~~~~l~~~~~~ 202 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH---KFNINPNANADNKEKFLTKGTP 202 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE---EEEECTTCCTTTCCCCEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE---EEEEcCCCCcccccceeecccc
Confidence 87532 11 11111 23357899999999766554 578899 99885211 1
Q ss_pred -eEeecCCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeee------ecCCCCccEEEEEEcCCCCEEEEEecC--c
Q psy11524 160 -YSSLTHDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHS------LDKPDTGSVYDLVWSNDATQIAGACAN--V 228 (323)
Q Consensus 160 -~~~~~~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~~~~~d--~ 228 (323)
.........+..++|+|||+++++++. + .|.+||+.+.... ....+...+..++|+|||++|+++..+ +
T Consensus 203 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~ 282 (361)
T 3scy_A 203 EAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKAD 282 (361)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSC
T ss_pred cceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCC
Confidence 112234456789999999999888885 4 9999998754321 122233457899999999999777765 6
Q ss_pred -EEEEEcC--CCc--eeeeecCCCCccceEEEEEccCCCCccceEEEEe-CCCCeEEEeccc--c----cC-CCCcccee
Q psy11524 229 -IHIFDIS--SSS--SSNVTAPLSHSHEITQLAVNQTGSLQERHVAFID-KNRDLYLSMWSH--S----LD-KPDTGSVY 295 (323)
Q Consensus 229 -i~iwd~~--~~~--~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~-~~~~~~~~~~~~--~----~~-~~~~~~v~ 295 (323)
|.+|++. +++ .+.. +.. ...+..++|+|+| +.|.+.+ .++.+.+|.+.. + +. ..+...+.
T Consensus 283 ~i~v~~~~~~~g~~~~~~~--~~~-g~~~~~~~~spdg----~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~ 355 (361)
T 3scy_A 283 GVAIFKVDETNGTLTKVGY--QLT-GIHPRNFIITPNG----KYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPV 355 (361)
T ss_dssp EEEEEEECTTTCCEEEEEE--EEC-SSCCCEEEECTTS----CEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEE
T ss_pred EEEEEEEcCCCCcEEEeeE--ecC-CCCCceEEECCCC----CEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCe
Confidence 9999985 455 3333 233 4567899999999 7787777 456777865542 2 11 12234567
Q ss_pred EEEEe
Q psy11524 296 DLVWS 300 (323)
Q Consensus 296 ~~~~s 300 (323)
++.|.
T Consensus 356 ~v~~~ 360 (361)
T 3scy_A 356 CLKFV 360 (361)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 77775
No 168
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=2e-18 Score=144.43 Aligned_cols=199 Identities=11% Similarity=0.044 Sum_probs=140.5
Q ss_pred ccceeeecCCCC--CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeecc------CCCeEEEEECCCCCEEEEE
Q psy11524 71 ALSLCRTLNVSP--PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAH------DGLILKVAWCSSTDLILSG 140 (323)
Q Consensus 71 ~~~~~~~~~~~~--~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~------~~~v~~~~~~~~~~~l~~~ 140 (323)
+.+..+.+.... .+..++|+|+|++++++...++.|++|+..+. ...+... ...+..++|+|||++|+++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 109 (349)
T 1jmx_B 30 SDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYAT 109 (349)
T ss_dssp TTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEE
T ss_pred CCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEE
Confidence 344444554444 68899999999988777666679999998765 2333322 2236789999999999988
Q ss_pred cCC------------CceEeeeEEeCCC----CeeeEeecCCCceeEEEEecCCCEEEEEeCCeEEEEeCCCCe-eeecC
Q psy11524 141 GED------------CKYKASFVWDTDG----RQLYSSLTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWS-HSLDK 203 (323)
Q Consensus 141 ~~d------------~~i~~i~v~d~~~----~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~~-~~~~~ 203 (323)
+.+ +.|. +||+.. +.+..+. +...+.+++|+|+|+ +++++ +.|++||+.+.. ...+.
T Consensus 110 ~~~~~~~~~~~~~~~~~i~---~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~-~~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 110 VNPTQRLNDHYVVKPPRLE---VFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG-PDIYKMDVKTGKYTVALP 183 (349)
T ss_dssp EEEEEECSSCEEECCCEEE---EEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES-SSEEEECTTTCCEEEEEC
T ss_pred cccccccccccccCCCeEE---EEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc-CcEEEEeCCCCceecccc
Confidence 865 8888 999864 2222232 344688999999999 55543 359999986442 22221
Q ss_pred CCC--------------------------------------------------------------------ccEEEEEEc
Q psy11524 204 PDT--------------------------------------------------------------------GSVYDLVWS 215 (323)
Q Consensus 204 ~~~--------------------------------------------------------------------~~v~~~~~~ 215 (323)
.+. ..+..++|+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 263 (349)
T 1jmx_B 184 LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRS 263 (349)
T ss_dssp STTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEEC
T ss_pred ccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEec
Confidence 110 134567788
Q ss_pred C-CCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEeccc
Q psy11524 216 N-DATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSH 284 (323)
Q Consensus 216 ~-~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~ 284 (323)
| +|++++++ ++ |.+||+.+++.+..+ . ....+..++|+|++ +.|.+...++.+.+|+...
T Consensus 264 p~dg~~l~~~--~~~v~~~d~~~~~~~~~~--~-~~~~~~~~~~s~dg----~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 264 PKDPNQIYGV--LNRLAKYDLKQRKLIKAA--N-LDHTYYCVAFDKKG----DKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp SSCTTEEEEE--ESEEEEEETTTTEEEEEE--E-CSSCCCEEEECSSS----SCEEEESBSSEEEEEETTT
T ss_pred CCCCCEEEEE--cCeEEEEECccCeEEEEE--c-CCCCccceEECCCC----CEEEEecCCCeEEEEeccc
Confidence 9 99999888 67 999999999887763 2 23457789999998 6777777778888998876
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.82 E-value=4.8e-19 Score=150.82 Aligned_cols=261 Identities=8% Similarity=-0.028 Sum_probs=164.8
Q ss_pred eEeeEeccCCcceeeeeec-c---c--cccc-cceeeecCCCCCE-EEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeE
Q psy11524 47 VINYPISPYISVLHSYAAS-H---S--WPQA-LSLCRTLNVSPPV-YSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATK 117 (323)
Q Consensus 47 v~~~~~~~~~~~~~~~~~~-~---~--~~~~-~~~~~~~~~~~~v-~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~ 117 (323)
+..+.|+|||+.++..... + . |+.. .+..+...+.... ..+.|+|||++|++++.+. .|++|+..+. ...
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~-~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNEL-NLMKVDLETLEEQV 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTT-EEEEEETTTCCEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCC-cEEEEECCCCCcEE
Confidence 6778999999876544332 1 1 2322 2222222233333 3378999999999887775 8999998765 333
Q ss_pred eec-cCCCeEE-------------------EEECCCCCEEEEEc-----CCCceEeeeEEeCCCCeeeEeecCCCceeEE
Q psy11524 118 WQA-HDGLILK-------------------VAWCSSTDLILSGG-----EDCKYKASFVWDTDGRQLYSSLTHDHPISSL 172 (323)
Q Consensus 118 ~~~-~~~~v~~-------------------~~~~~~~~~l~~~~-----~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~ 172 (323)
+.. +...... +.|+|+++.++... .+..|. +||+.+.....+..+...+..+
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~---~~d~~~g~~~~~~~~~~~~~~~ 193 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLI---KVDIETGELEVIHQDTAWLGHP 193 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEE---EEETTTCCEEEEEEESSCEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEE---EEECCCCcEEeeccCCcccccc
Confidence 322 3332222 35677777665543 345566 9999766666666667788999
Q ss_pred EEec-CCCEEEEEeCC-------eEEEEeCCCCeeeecCCC--CccEEEEEEcCCCCEEEEEecC-----c-EEEEEcCC
Q psy11524 173 AWAP-GGDMFAVGSYN-------TLRLCDKVGWSHSLDKPD--TGSVYDLVWSNDATQIAGACAN-----V-IHIFDISS 236 (323)
Q Consensus 173 ~~~p-~~~~l~~~~~~-------~i~i~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d-----~-i~iwd~~~ 236 (323)
.|+| +++.|+..+.+ .|.+||+.+.....+..+ ...+..++|+|+|++|+..+.+ + |++||+.+
T Consensus 194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 194 IYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp EEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT
T ss_pred eECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC
Confidence 9999 78877776652 488888876544443333 2358889999999988877654 6 99999988
Q ss_pred CceeeeecCCCCccceEEEEEcc-CCCCccceEEEEe----------------CCCCeEEEeccccc---CCCCcc----
Q psy11524 237 SSSSNVTAPLSHSHEITQLAVNQ-TGSLQERHVAFID----------------KNRDLYLSMWSHSL---DKPDTG---- 292 (323)
Q Consensus 237 ~~~~~~~~~~~~~~~v~~~~~~p-~g~~~d~~l~~~~----------------~~~~~~~~~~~~~~---~~~~~~---- 292 (323)
++........ . .. +.|+| +| ..++... .+..+++|+..... ...+..
T Consensus 274 g~~~~l~~~~---~-~~-~~~s~~dg----~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~ 344 (396)
T 3c5m_A 274 LENEEVMVMP---P-CS-HLMSNFDG----SLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDV 344 (396)
T ss_dssp CCEEEEEECC---S-EE-EEEECSSS----SEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCC
T ss_pred CCeEEeeeCC---C-CC-CCccCCCC----ceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCcccc
Confidence 8755431122 1 22 88999 98 5555432 22456777765431 111122
Q ss_pred -------ceeEEEEeeCCCeeEeeec-CCeEEEEEe
Q psy11524 293 -------SVYDLVWSSDATQIAGACA-NGSLLLGTI 320 (323)
Q Consensus 293 -------~v~~~~~s~~g~~l~s~~~-dg~i~~~~l 320 (323)
.+..++|+|||+.|+.++. ++...+|.+
T Consensus 345 ~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 345 LDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp BTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 2566899999998886654 566666654
No 170
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.81 E-value=2.9e-18 Score=142.65 Aligned_cols=212 Identities=12% Similarity=0.036 Sum_probs=141.5
Q ss_pred CeEEEEeeCCeEEEEeCCCCc--eeEeeccCC---CeEEEEECCCCCEE-EEEcCCCceEeeeEEeCC-CCeeeEeecC-
Q psy11524 94 NKVLLTQAKSLVIKPLSPNNK--ATKWQAHDG---LILKVAWCSSTDLI-LSGGEDCKYKASFVWDTD-GRQLYSSLTH- 165 (323)
Q Consensus 94 ~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~---~v~~~~~~~~~~~l-~~~~~d~~i~~i~v~d~~-~~~~~~~~~~- 165 (323)
+++++++.+ +.|++||.... ...+. ... .+..++|+|+|+.+ +++..++.|. +||+. ++.+..+...
T Consensus 2 ~~~v~~~~~-~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~---~~d~~~~~~~~~~~~~~ 76 (337)
T 1pby_B 2 DYILAPARP-DKLVVIDTEKMAVDKVIT-IADAGPTPMVPMVAPGGRIAYATVNKSESLV---KIDLVTGETLGRIDLST 76 (337)
T ss_dssp EEEEEEETT-TEEEEEETTTTEEEEEEE-CTTCTTCCCCEEECTTSSEEEEEETTTTEEE---EEETTTCCEEEEEECCB
T ss_pred cEEEEcCCC-CeEEEEECCCCcEEEEEE-cCCCCCCccceEEcCCCCEEEEEeCCCCeEE---EEECCCCCeEeeEEcCC
Confidence 356666555 69999998765 33333 233 57899999999765 4556678999 99996 4555444422
Q ss_pred ----CCceeEEEEecCCCEEEEEe------------C-CeEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc
Q psy11524 166 ----DHPISSLAWAPGGDMFAVGS------------Y-NTLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV 228 (323)
Q Consensus 166 ----~~~v~~~~~~p~~~~l~~~~------------~-~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 228 (323)
...+.+++|+|+|++++++. . +.|.+||+.+............+.+++|+|+|++|+++ ++
T Consensus 77 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~ 154 (337)
T 1pby_B 77 PEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GR 154 (337)
T ss_dssp TTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SS
T ss_pred cccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CC
Confidence 12577899999999988885 4 59999999865443222234567889999999988888 57
Q ss_pred -EEEEEcCCCceeeeecCCCCccceEEEEEccCCC------Cccc-----------------------eEEEEeCCCCeE
Q psy11524 229 -IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGS------LQER-----------------------HVAFIDKNRDLY 278 (323)
Q Consensus 229 -i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~------~~d~-----------------------~l~~~~~~~~~~ 278 (323)
|++||+.+++....+.......+ +.|+|++. ..++ .|.+++..+...
T Consensus 155 ~i~~~d~~~~~~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 231 (337)
T 1pby_B 155 DLHVMDPEAGTLVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEM 231 (337)
T ss_dssp SEEEEETTTTEEEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCE
T ss_pred eEEEEECCCCcEeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCc
Confidence 99999999988766322221122 36788874 1111 133344333211
Q ss_pred EEecccccCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 279 LSMWSHSLDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 279 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
. .. ....+...+.+++|+|+|++|+++ ++.|++|++.
T Consensus 232 ~-~~---~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~ 268 (337)
T 1pby_B 232 A-MR---EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLE 268 (337)
T ss_dssp E-EE---EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETT
T ss_pred e-Ee---ecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECC
Confidence 1 00 011134567889999999999888 7999999864
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=1.8e-16 Score=129.69 Aligned_cols=225 Identities=8% Similarity=-0.012 Sum_probs=156.6
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCe
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQ 158 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~ 158 (323)
.+.....+++|+|+|+.++..+...+.|+.|+..+....+..+...+.+++++|+|+++++...++.|. +||.....
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~---~~d~~~g~ 101 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLE---RQREPGGE 101 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEEETTTTEEE---EECSTTCC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEEecCCCeEE---EEcCCCCc
Confidence 356678899999999955555555568999998877666666778899999999999888877778899 99994333
Q ss_pred eeEeec-C----CCceeEEEEecCCCEEEEE----e--------------CCeEEEEeCCCCeeeecCCCCccEEEEEEc
Q psy11524 159 LYSSLT-H----DHPISSLAWAPGGDMFAVG----S--------------YNTLRLCDKVGWSHSLDKPDTGSVYDLVWS 215 (323)
Q Consensus 159 ~~~~~~-~----~~~v~~~~~~p~~~~l~~~----~--------------~~~i~i~d~~~~~~~~~~~~~~~v~~~~~~ 215 (323)
...+.. . ...+..++++|+|+++++. + .+.|..++..+. ......+......++|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~gi~~s 180 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT-LSAPIRDRVKPNGLAFL 180 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-EEEEECCCSSEEEEEEC
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCC-EEEeecCCCCCccEEEC
Confidence 333321 1 1246789999999988863 2 126667776633 33334456678999999
Q ss_pred CCCCEEEEEecCc-EEEEEcC-CCce---eeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc---cC
Q psy11524 216 NDATQIAGACANV-IHIFDIS-SSSS---SNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS---LD 287 (323)
Q Consensus 216 ~~~~~l~~~~~d~-i~iwd~~-~~~~---~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~---~~ 287 (323)
|+|+.+++.+.++ |++||+. +++. ... +..+...+..++++++| + +.+.. .+.+.+|+.... ..
T Consensus 181 ~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~--~~~~~~~p~~i~~d~~G----~-l~v~~-~~~v~~~~~~g~~~~~~ 252 (296)
T 3e5z_A 181 PSGNLLVSDTGDNATHRYCLNARGETEYQGVH--FTVEPGKTDGLRVDAGG----L-IWASA-GDGVHVLTPDGDELGRV 252 (296)
T ss_dssp TTSCEEEEETTTTEEEEEEECSSSCEEEEEEE--ECCSSSCCCSEEEBTTS----C-EEEEE-TTEEEEECTTSCEEEEE
T ss_pred CCCCEEEEeCCCCeEEEEEECCCCcCcCCCeE--eeCCCCCCCeEEECCCC----C-EEEEc-CCeEEEECCCCCEEEEE
Confidence 9999886666677 9999987 5554 223 22344556789999997 3 44444 566666665432 12
Q ss_pred CCCccceeEEEE-eeCCCeeEeeecCCeEE
Q psy11524 288 KPDTGSVYDLVW-SSDATQIAGACANGSLL 316 (323)
Q Consensus 288 ~~~~~~v~~~~~-s~~g~~l~s~~~dg~i~ 316 (323)
..+.. +.+++| +|+++.|++++.++..+
T Consensus 253 ~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 253 LTPQT-TSNLCFGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp ECSSC-CCEEEEESTTSCEEEEEETTEEEE
T ss_pred ECCCC-ceeEEEECCCCCEEEEEcCCeEEE
Confidence 23344 899999 58999999888775433
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.78 E-value=2.1e-15 Score=125.44 Aligned_cols=256 Identities=7% Similarity=-0.044 Sum_probs=162.1
Q ss_pred eeEeeEeccCCcceeeeeecc---ccccccceeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEee-
Q psy11524 46 TVINYPISPYISVLHSYAASH---SWPQALSLCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQ- 119 (323)
Q Consensus 46 ~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~- 119 (323)
.|.++.|+|++..+....... .| ..+.+..+ .+...+.+++|+|+|+.++++..+ +.|+.|+..+. ...+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~-~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISESELQTI--TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFE-GNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGGGSCEE--ECEEEEEEESSCCCEEEEEECTTSCEEEEETTT-CEEEEECTTTCCEEEEEE
T ss_pred ccceeeecCCccceeEEeecccCccc--ccceeEEEeccCccccCcEECCCCCEEEEECCC-CEEEEEeCCCCcEEEEee
Confidence 466778888775554332111 12 12222333 356778999999999865555444 68999998755 33333
Q ss_pred ccCCCeEEEEECCCCCEEEEEcCC----CceEeeeEEeCCCCeeeEe-e--cCCCceeEEEEecCCCEEEEEeC------
Q psy11524 120 AHDGLILKVAWCSSTDLILSGGED----CKYKASFVWDTDGRQLYSS-L--THDHPISSLAWAPGGDMFAVGSY------ 186 (323)
Q Consensus 120 ~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~i~v~d~~~~~~~~~-~--~~~~~v~~~~~~p~~~~l~~~~~------ 186 (323)
.+...+.+++++|+|+++++...+ +.|. +||.++.....+ . .....+.+++++|+|+++++...
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~---~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~ 160 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF---AATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP 160 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEE---EECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBC
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEE---EEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCC
Confidence 566789999999999988877666 6788 999976555432 2 23456899999999988777653
Q ss_pred -CeEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEe-cCc-EEEEEcCC-Cceeeee------cCCCCccceEEEE
Q psy11524 187 -NTLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGAC-ANV-IHIFDISS-SSSSNVT------APLSHSHEITQLA 256 (323)
Q Consensus 187 -~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~-i~iwd~~~-~~~~~~~------~~~~~~~~v~~~~ 256 (323)
+.|..+|..+............+..++|+|+|++|+.+. .++ |.+||..+ ++.+..+ .+.++ ..+..++
T Consensus 161 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~ 239 (333)
T 2dg1_A 161 LGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCC 239 (333)
T ss_dssp CEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEE
T ss_pred CceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceE
Confidence 267777766543333322334578999999998665554 466 99999864 3332210 01222 4677899
Q ss_pred EccCCCCccceEEEEeCCCCeEEEecccc---cCCCCcc------ceeEEEEeeCCCeeEeeecC
Q psy11524 257 VNQTGSLQERHVAFIDKNRDLYLSMWSHS---LDKPDTG------SVYDLVWSSDATQIAGACAN 312 (323)
Q Consensus 257 ~~p~g~~~d~~l~~~~~~~~~~~~~~~~~---~~~~~~~------~v~~~~~s~~g~~l~s~~~d 312 (323)
++++| ........++.+.+|+.... ....+.. .+.+++|+||++.|+.++.+
T Consensus 240 ~d~~G----~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 240 IDSDD----NLYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EBTTC----CEEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ECCCC----CEEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 99997 32222223455666654321 1111121 68999999998777766655
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.77 E-value=2.7e-18 Score=146.13 Aligned_cols=227 Identities=11% Similarity=0.048 Sum_probs=150.7
Q ss_pred CEEEEEEcCCCCeEEEEeeCC--eEEEEeCCCCc-eeEeeccCCCeE-EEEECCCCCEEEEEcCCCceEeeeEEeCCCCe
Q psy11524 83 PVYSAAWSPDSNKVLLTQAKS--LVIKPLSPNNK-ATKWQAHDGLIL-KVAWCSSTDLILSGGEDCKYKASFVWDTDGRQ 158 (323)
Q Consensus 83 ~v~~~~~sp~~~~l~~~~~~~--~~v~~~~~~~~-~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~ 158 (323)
.+.+++|+|||++|+++...+ ..|++|+..+. ...+..+..... .+.|+|||++|+.++.++.+. +||+.+..
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~---~~d~~~~~ 113 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLM---KVDLETLE 113 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEE---EEETTTCC
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEE---EEECCCCC
Confidence 367789999999999886542 37888887765 444444443333 378999999999999888888 99997554
Q ss_pred eeEeec-CCCceeE-------------------EEEecCCCEEEEEe-----CC-eEEEEeCCCCeeeecCCCCccEEEE
Q psy11524 159 LYSSLT-HDHPISS-------------------LAWAPGGDMFAVGS-----YN-TLRLCDKVGWSHSLDKPDTGSVYDL 212 (323)
Q Consensus 159 ~~~~~~-~~~~v~~-------------------~~~~p~~~~l~~~~-----~~-~i~i~d~~~~~~~~~~~~~~~v~~~ 212 (323)
...+.. +...... +.|+|+++.++... .+ .|++||+.+........+...+..+
T Consensus 114 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~ 193 (396)
T 3c5m_A 114 EQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHP 193 (396)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEE
T ss_pred cEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccc
Confidence 444433 2221112 34677777766543 34 8999998865544444466778999
Q ss_pred EEcC-CCCEEEEEecC------c-EEEEEcCCCceeeeecCCCC-ccceEEEEEccCCCCccceEEEEeCC---CC--eE
Q psy11524 213 VWSN-DATQIAGACAN------V-IHIFDISSSSSSNVTAPLSH-SHEITQLAVNQTGSLQERHVAFIDKN---RD--LY 278 (323)
Q Consensus 213 ~~~~-~~~~l~~~~~d------~-i~iwd~~~~~~~~~~~~~~~-~~~v~~~~~~p~g~~~d~~l~~~~~~---~~--~~ 278 (323)
.|+| +++.|+..+.+ . |.+||+..++.... .... ...+..++|+|+| +.|++...+ .. +.
T Consensus 194 ~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l--~~~~~~~~~~~~~~spdg----~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 194 IYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKI--KEHAEGESCTHEFWIPDG----SAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp EEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEES--SCCCTTEEEEEEEECTTS----SCEEEEEEETTTCCEEEE
T ss_pred eECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEe--eccCCCccccceEECCCC----CEEEEEecCCCCccceEE
Confidence 9999 88877766542 5 88999876654432 2221 3468889999998 555554322 22 67
Q ss_pred EEecccc----cCCCCccceeEEEEee-CCCeeEeee----------------cCCeEEEEEee
Q psy11524 279 LSMWSHS----LDKPDTGSVYDLVWSS-DATQIAGAC----------------ANGSLLLGTII 321 (323)
Q Consensus 279 ~~~~~~~----~~~~~~~~v~~~~~s~-~g~~l~s~~----------------~dg~i~~~~l~ 321 (323)
+|++... +... . ... +.|+| ||++|+.++ .++.|++|++.
T Consensus 268 ~~d~~~g~~~~l~~~-~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~ 328 (396)
T 3c5m_A 268 KANPETLENEEVMVM-P-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTK 328 (396)
T ss_dssp EECTTTCCEEEEEEC-C-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETT
T ss_pred EEECCCCCeEEeeeC-C-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecc
Confidence 7776543 1111 1 123 89999 999888754 34778888863
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=2.3e-16 Score=131.95 Aligned_cols=216 Identities=13% Similarity=0.067 Sum_probs=148.3
Q ss_pred CCCCEEEEEEcCCCCeEEEEee--------CCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCCC--ceEe
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQA--------KSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGEDC--KYKA 148 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~--------~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~ 148 (323)
....+..+++ ||+++++... ....|++|+..+. ...+ ..+..++|+|||++|+.++.++ .-..
T Consensus 13 ~~~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 13 KFAYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp CSCEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred eeEEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence 3456777888 8999887642 1357999988765 3334 5678899999999999887543 2223
Q ss_pred eeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeC---------------------------C-eEEEEeCCCCee-
Q psy11524 149 SFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSY---------------------------N-TLRLCDKVGWSH- 199 (323)
Q Consensus 149 i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~---------------------------~-~i~i~d~~~~~~- 199 (323)
|++|++++.....+..... +..++|+|||+.|++++. . .|++||+.+...
T Consensus 87 l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 87 IWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 4588987666666655555 999999999999888752 2 799999886654
Q ss_pred eecCCCCccEEEEEEcCCCCEEEEEec---------Cc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEE
Q psy11524 200 SLDKPDTGSVYDLVWSNDATQIAGACA---------NV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVA 269 (323)
Q Consensus 200 ~~~~~~~~~v~~~~~~~~~~~l~~~~~---------d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~ 269 (323)
..+.. . .+..++|+|+| +++++.. .. |.++| +++.... ..+ ..+..+ +|+| +.|+
T Consensus 166 ~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l---~~~-~~~~~~--spdg----~~l~ 230 (347)
T 2gop_A 166 EEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKM---FEK-VSFYAV--DSDG----ERIL 230 (347)
T ss_dssp EEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEE---EEE-ESEEEE--EECS----SCEE
T ss_pred eeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEe---ccC-cceeeE--CCCC----CEEE
Confidence 44333 3 78899999999 7776654 23 66666 5554332 223 444444 9998 6666
Q ss_pred EEeCC--------CCeEEEecccc---cCCCCccceeE-EEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 270 FIDKN--------RDLYLSMWSHS---LDKPDTGSVYD-LVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 270 ~~~~~--------~~~~~~~~~~~---~~~~~~~~v~~-~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
+...+ ..+.+++ ... +...+...+.. +.|+ || ++++++.++.+++| +.
T Consensus 231 ~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 231 LYGKPEKKYMSEHNKLYIYD-GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp EEECCSSSCCCSSCEEEEEC-SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred EEEccccCCccccceEEEEC-CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 65433 2355555 221 33445667886 9999 88 88999999999999 64
No 175
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=3.1e-16 Score=131.15 Aligned_cols=216 Identities=13% Similarity=0.065 Sum_probs=148.2
Q ss_pred CCEEEEEEcCCCCeEEEEeeC----CeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCC-------------
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAK----SLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGED------------- 143 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~----~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------------- 143 (323)
..+..++|||||++|++++.+ ...|++|+..+. ...+..+.. +..++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------C
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 567889999999999988753 245888887655 444544445 9999999999998887642
Q ss_pred -----C------ceEeeeEEeCCCCee-eEeecCCCceeEEEEecCCCEEEEEeC---------C-eEEEEeCCCCeeee
Q psy11524 144 -----C------KYKASFVWDTDGRQL-YSSLTHDHPISSLAWAPGGDMFAVGSY---------N-TLRLCDKVGWSHSL 201 (323)
Q Consensus 144 -----~------~i~~i~v~d~~~~~~-~~~~~~~~~v~~~~~~p~~~~l~~~~~---------~-~i~i~d~~~~~~~~ 201 (323)
| .-..|++||+.+... ..+.. . .+..++|+||| +++++.. . .|.++| +.....
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~ 212 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEK 212 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEE
Confidence 1 122345999976655 66655 4 78899999999 7666643 2 466666 333333
Q ss_pred cCCCCccEEEEEEcCCCCEEEEEecC--------c-EEEEEcCCCceeeeecCCCCccceEE-EEEccCCCCccceEEEE
Q psy11524 202 DKPDTGSVYDLVWSNDATQIAGACAN--------V-IHIFDISSSSSSNVTAPLSHSHEITQ-LAVNQTGSLQERHVAFI 271 (323)
Q Consensus 202 ~~~~~~~v~~~~~~~~~~~l~~~~~d--------~-i~iwd~~~~~~~~~~~~~~~~~~v~~-~~~~p~g~~~d~~l~~~ 271 (323)
+..+ ..+..+ +|+|++|+.++.+ . |++|| +++.... ...+...+.. +.|+ + +.+.+.
T Consensus 213 l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l--~~~~~~~~~~~~~~s-d-----g~~~~~ 279 (347)
T 2gop_A 213 MFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI--LDEVDRGVGQAKIKD-G-----KVYFTL 279 (347)
T ss_dssp EEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES--STTCCSEEEEEEEET-T-----EEEEEE
T ss_pred eccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEec--cccCCcccCCccEEc-C-----cEEEEE
Confidence 3333 445444 9999988877632 4 88888 5554443 4556677886 8998 6 466677
Q ss_pred eCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeE-EEEEe
Q psy11524 272 DKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSL-LLGTI 320 (323)
Q Consensus 272 ~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i-~~~~l 320 (323)
..++...+| +..+ +.. +...|.+++|+| ..+++++.++.. .+|.+
T Consensus 280 ~~~~~~~l~-~~~g~~~~~~~-~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 280 FEEGSVNLY-IWDGEIKPIAK-GRHWIMGFDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp EETTEEEEE-EESSSEEEEEC-SSSEEEEEEESS--SEEEEEECSSSCCEEEEE
T ss_pred ecCCcEEEE-EcCCceEEEec-CCCeEEeeeeeC--cEEEEEcCCCChHHheEe
Confidence 777888888 7532 222 366789999999 677777777664 67754
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.76 E-value=5.2e-15 Score=120.34 Aligned_cols=234 Identities=9% Similarity=0.049 Sum_probs=160.9
Q ss_pred cccceeEeeEeccCCcceeeeeecc---ccccccceeeecC-------CCCCEEEEEE-cCCCCeEEEEeeCCeEEEEeC
Q psy11524 42 RYDGTVINYPISPYISVLHSYAASH---SWPQALSLCRTLN-------VSPPVYSAAW-SPDSNKVLLTQAKSLVIKPLS 110 (323)
Q Consensus 42 ~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-------~~~~v~~~~~-sp~~~~l~~~~~~~~~v~~~~ 110 (323)
++-....++.++|++..+..-...+ .|+...+....+. +...+.++++ .++++.+++....++.|++|+
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 4455677888999885332211111 2554444444442 2357899999 466665554433246899999
Q ss_pred CCCce-eEee-ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEee--cCCCceeEEEEecCCCEEEEEeC
Q psy11524 111 PNNKA-TKWQ-AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSL--THDHPISSLAWAPGGDMFAVGSY 186 (323)
Q Consensus 111 ~~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~--~~~~~v~~~~~~p~~~~l~~~~~ 186 (323)
..+.. ..+. .+...+.+++++|+|+++++...++.|. +||.+++.+..+. .+...+..++++|+|+++++...
T Consensus 107 ~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~---~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVI---IFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEE---EECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEE---EEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 66653 3342 2345789999999999888878889999 9998887776664 33456899999999987666655
Q ss_pred C-eEEEEeCCCCeeeecCCC--CccEEEEEEcCCCCEEEEEecC-c-EEEEEcCCCceeeeecCCCCccceEEEEEccCC
Q psy11524 187 N-TLRLCDKVGWSHSLDKPD--TGSVYDLVWSNDATQIAGACAN-V-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTG 261 (323)
Q Consensus 187 ~-~i~i~d~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d-~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g 261 (323)
+ .|++||..+..+..+... ...+..++++|+|+++++...+ + |.+||. +++.+..+........+..++++|+|
T Consensus 184 ~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g 262 (286)
T 1q7f_A 184 AHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDG 262 (286)
T ss_dssp GTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTT
T ss_pred CCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCC
Confidence 4 999999887655544332 3578999999999888887766 5 999995 56666553222223357799999997
Q ss_pred CCccceEEEEeCCCCeEEEeccc
Q psy11524 262 SLQERHVAFIDKNRDLYLSMWSH 284 (323)
Q Consensus 262 ~~~d~~l~~~~~~~~~~~~~~~~ 284 (323)
. +.+.+.++.+.+|++..
T Consensus 263 ----~-l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 263 ----S-VVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp ----E-EEEEETTTEEEEEECSC
T ss_pred ----c-EEEECCCCeEEEEEccc
Confidence 4 55557788899998754
No 177
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.75 E-value=3.2e-15 Score=120.46 Aligned_cols=229 Identities=10% Similarity=0.011 Sum_probs=157.1
Q ss_pred CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEe--eccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeee
Q psy11524 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKW--QAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLY 160 (323)
Q Consensus 83 ~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~ 160 (323)
...+++++|+|+.++++....+.|..|+..+..... ..+...+.+++++++|+++++.. ++.|. +||.++....
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~---~~d~~~~~~~ 100 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVV---TLAAGSNNQT 100 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEE---EECTTCSCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEE---EEeCCCceEe
Confidence 789999999998555253444689999876653222 22335678899999999666665 88898 9999876655
Q ss_pred Eeec-CCCceeEEEEecCCCEEEEEeC-CeEEEEeCCCCeeee-cCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCC
Q psy11524 161 SSLT-HDHPISSLAWAPGGDMFAVGSY-NTLRLCDKVGWSHSL-DKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISS 236 (323)
Q Consensus 161 ~~~~-~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~ 236 (323)
.+.. ....+..++++|+|+++++... +.|.+|+..+..... .......+..++++|+|+++++...++ |.+||...
T Consensus 101 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 101 VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 4432 2356889999999986666555 489999865443222 222334678999999998666666677 99999877
Q ss_pred CceeeeecCCCCccceEEEEEccCCCCccceEEEEe-CCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeec
Q psy11524 237 SSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFID-KNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACA 311 (323)
Q Consensus 237 ~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~-~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~ 311 (323)
+..... .......+..++++++| .+.+.+ .++.+..++.... ....+...+.+++++|+|+.+++...
T Consensus 181 ~~~~~~--~~~~~~~p~~i~~d~~g-----~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 181 NNQVVL--PFTDITAPWGIAVDEAG-----TVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp CCEEEC--CCSSCCSEEEEEECTTC-----CEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGG
T ss_pred CceEee--cccCCCCceEEEECCCC-----CEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECC
Confidence 665443 23333668899999986 344444 3456666665443 11122356899999999998889899
Q ss_pred CCeEEEEEeec
Q psy11524 312 NGSLLLGTIIQ 322 (323)
Q Consensus 312 dg~i~~~~l~~ 322 (323)
+++|+++++.+
T Consensus 254 ~~~v~~~~~~~ 264 (270)
T 1rwi_B 254 NDRVVKLTSLE 264 (270)
T ss_dssp GTEEEEECCCG
T ss_pred CCEEEEEcCCC
Confidence 99999998754
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.75 E-value=3.4e-16 Score=143.34 Aligned_cols=233 Identities=12% Similarity=0.036 Sum_probs=155.7
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCe----EEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCCCc-----------
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSL----VIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGEDCK----------- 145 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~----~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------- 145 (323)
..+..++|||||++||++....| .|++||+.++ ..........+..++|+|||+.|+.++.++.
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~ 204 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETST 204 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCcccccccccccc
Confidence 35889999999999998876543 8999998776 2222222223667999999999999887765
Q ss_pred --eEeeeEEeCCCCe---eeEeec--CCCceeEEEEecCCCEEEEEeC-----C-eEEEEeCCC------C--eeeecCC
Q psy11524 146 --YKASFVWDTDGRQ---LYSSLT--HDHPISSLAWAPGGDMFAVGSY-----N-TLRLCDKVG------W--SHSLDKP 204 (323)
Q Consensus 146 --i~~i~v~d~~~~~---~~~~~~--~~~~v~~~~~~p~~~~l~~~~~-----~-~i~i~d~~~------~--~~~~~~~ 204 (323)
-..|++|++.+.. ...+.. +...+..+.|+|||++|+..+. + .|++||+.+ . ....+..
T Consensus 205 ~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~ 284 (710)
T 2xdw_A 205 NLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLID 284 (710)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEEC
T ss_pred CCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeC
Confidence 1123399996432 122222 3455789999999999887763 4 799999864 3 3444444
Q ss_pred CCccEEEEEEcCCCCEEEEEec----Cc-EEEEEcCCCce--eeeecCCCCc--cceEEEEEccCCCCccceEEEEeCCC
Q psy11524 205 DTGSVYDLVWSNDATQIAGACA----NV-IHIFDISSSSS--SNVTAPLSHS--HEITQLAVNQTGSLQERHVAFIDKNR 275 (323)
Q Consensus 205 ~~~~v~~~~~~~~~~~l~~~~~----d~-i~iwd~~~~~~--~~~~~~~~~~--~~v~~~~~~p~g~~~d~~l~~~~~~~ 275 (323)
+...+.. .|+|+|+.|+..+. +. |.+||+.+++. ... +..+. ..+..++|++++ ..+.....++
T Consensus 285 ~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~--l~~~~~~~~~~~~~~~~~~----~lv~~~~~~g 357 (710)
T 2xdw_A 285 NFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKV--LVPEHEKDVLEWVACVRSN----FLVLCYLHDV 357 (710)
T ss_dssp SSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE--EECCCSSCEEEEEEEETTT----EEEEEEEETT
T ss_pred CCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccee--ccCCCCCCeEEEEEEEcCC----EEEEEEEECC
Confidence 5555544 58899988877654 34 89999987642 233 22332 368889998765 6666676666
Q ss_pred Ce--EEEecccc----cCCCCccceeEEEEeeCCCeeEee----ecCCeEEEEEee
Q psy11524 276 DL--YLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGA----CANGSLLLGTII 321 (323)
Q Consensus 276 ~~--~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~----~~dg~i~~~~l~ 321 (323)
.. .++++..+ ....+.+.+..++++|+++.|+.. ...++|+.|++.
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 413 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLT 413 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETT
T ss_pred EEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECC
Confidence 54 44454222 233446778899999999866622 345789888864
No 179
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.75 E-value=3.6e-16 Score=131.87 Aligned_cols=191 Identities=7% Similarity=-0.006 Sum_probs=128.4
Q ss_pred CCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecC--CCceeEEEEecCCCE--EEEEe------------
Q psy11524 123 GLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTH--DHPISSLAWAPGGDM--FAVGS------------ 185 (323)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~--~~~v~~~~~~p~~~~--l~~~~------------ 185 (323)
..+..++|+|||++|++++.+ .|. +|+++ ...+..+..+ .+.+.+++|+|+|++ ++++.
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~---~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWS---SFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEE---EEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEES
T ss_pred CCCcEEEECCCCCEEEEEccc-eEE---EEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceee
Confidence 467889999999999988887 888 99985 3333322211 133566899999994 44442
Q ss_pred -C-CeEEEEeCC--CCeeeecC----CCCccEEEEEEcCCCCEEEEEec-Cc-EEEEEcC-CCceee--eecCCCCccce
Q psy11524 186 -Y-NTLRLCDKV--GWSHSLDK----PDTGSVYDLVWSNDATQIAGACA-NV-IHIFDIS-SSSSSN--VTAPLSHSHEI 252 (323)
Q Consensus 186 -~-~~i~i~d~~--~~~~~~~~----~~~~~v~~~~~~~~~~~l~~~~~-d~-i~iwd~~-~~~~~~--~~~~~~~~~~v 252 (323)
. +.+.+|++. +....... .+...+.+++|+|+|++|+++.. ++ |++||+. +++... .+....+...+
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCE
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCC
Confidence 4 489999986 33222211 24567999999999998887765 45 9999998 676532 21111235678
Q ss_pred EEEEEccCCCCccceEEEEeC-CCCeEEEeccc--c----------cCC----CCcc------ceeEEE-EeeCCCeeEe
Q psy11524 253 TQLAVNQTGSLQERHVAFIDK-NRDLYLSMWSH--S----------LDK----PDTG------SVYDLV-WSSDATQIAG 308 (323)
Q Consensus 253 ~~~~~~p~g~~~d~~l~~~~~-~~~~~~~~~~~--~----------~~~----~~~~------~v~~~~-~s~~g~~l~s 308 (323)
..++|+|+| +.+.+.+. ++.+.+|++.. + ... .|.. .+..++ |+|||++|++
T Consensus 196 ~~~~~spdg----~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v 271 (365)
T 1jof_A 196 RWVAMHPTG----NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFA 271 (365)
T ss_dssp EEEEECTTS----SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEE
T ss_pred CEeEECCCC----CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEE
Confidence 999999999 56666554 45566665431 1 111 1121 588999 9999998887
Q ss_pred eecCC------eEEEEEee
Q psy11524 309 ACANG------SLLLGTII 321 (323)
Q Consensus 309 ~~~dg------~i~~~~l~ 321 (323)
+..+. .|.+|++.
T Consensus 272 ~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 272 SSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEESSTTSCCEEEEEEEC
T ss_pred ECCCCCCCCCCeEEEEEEC
Confidence 66433 89999984
No 180
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.71 E-value=1.1e-12 Score=106.88 Aligned_cols=268 Identities=9% Similarity=-0.019 Sum_probs=171.9
Q ss_pred eecccceeEeeEeccCCcceeeeeecc---ccccccceeeec---CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCC
Q psy11524 40 IRRYDGTVINYPISPYISVLHSYAASH---SWPQALSLCRTL---NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNN 113 (323)
Q Consensus 40 ~~~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~ 113 (323)
+..+...+.++.+.|+|.....-...+ .++...+ ...+ .....+.+++++++|...++...+ +.|..|+..+
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~-~~i~~~~~~g 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLDGK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAA-NKIGRITKKG 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEECSSTTCCEEEEEECTTSCEEEEETTT-TEEEEECTTS
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCCCC-eEEecCCcccCceeeEEECCCCCEEEeCCCC-CeEEEECCCC
Confidence 344556788899999885332211111 2343322 2222 245789999999999866654334 5788898775
Q ss_pred ceeEee--ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEe-ecCCCceeEEEEecCCCEEEEEeC-CeE
Q psy11524 114 KATKWQ--AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSS-LTHDHPISSLAWAPGGDMFAVGSY-NTL 189 (323)
Q Consensus 114 ~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~~~~~-~~i 189 (323)
....+. .....+.++++.|+|+++++...++.|. +||.+++..... ......+..++++++|+.+++... +.|
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~---~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 164 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIG---RITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAI 164 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE---EECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEE
T ss_pred cEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEE---EECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEE
Confidence 544333 2455789999999998888877788898 999854433222 223456899999999987776655 499
Q ss_pred EEEeCCCCeeee-cCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccce
Q psy11524 190 RLCDKVGWSHSL-DKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERH 267 (323)
Q Consensus 190 ~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~ 267 (323)
..||..+..... .......+..++++++|+..++...++ |..||. +++.... ........+..++++++|.
T Consensus 165 ~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~-~~~~~~~~~~~i~~~~~g~----- 237 (299)
T 2z2n_A 165 GRITESGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEF-KIPTPNARPHAITAGAGID----- 237 (299)
T ss_dssp EEECTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEE-ECSSTTCCEEEEEECSTTC-----
T ss_pred EEEcCCCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEE-ECCCCCCCceeEEECCCCC-----
Confidence 999985443322 233445688999999998766665677 999998 6664332 1333456788999999873
Q ss_pred EEEEe-CCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 268 VAFID-KNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 268 l~~~~-~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
+.+.+ .++.+..++.... ....+...+.++++ ++|++.++.. .+.+..++..
T Consensus 238 l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 238 LWFTEWGANKIGRLTSNNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLI 294 (299)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC
T ss_pred EEEeccCCceEEEECCCCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcC
Confidence 33333 2334444443211 11123467899999 8888766655 4556666653
No 181
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=1.4e-14 Score=120.28 Aligned_cols=196 Identities=13% Similarity=0.059 Sum_probs=137.4
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc---eeEe---------eccCCCeEEEEECC-CCCEEEEEc-CCCce
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK---ATKW---------QAHDGLILKVAWCS-STDLILSGG-EDCKY 146 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~---~~~~---------~~~~~~v~~~~~~~-~~~~l~~~~-~d~~i 146 (323)
-.....++++|+|+.+++. ..++.|+.|+..+. +..+ ..+-..+..++++| ++.++++.+ .++.|
T Consensus 90 ~~~p~gia~d~~g~l~v~d-~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I 168 (329)
T 3fvz_A 90 FYLPHGLSIDTDGNYWVTD-VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRI 168 (329)
T ss_dssp CSSEEEEEECTTSCEEEEE-TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEE
T ss_pred cCCceEEEECCCCCEEEEE-CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeE
Confidence 4578999999999966554 44468999998765 3333 23344689999999 788888876 68999
Q ss_pred EeeeEEeCCCCeeeEeecCC----------CceeEEEEecC-CCEEEEEeCC-eEEEEeCC-CCeeeec--CCCCccEEE
Q psy11524 147 KASFVWDTDGRQLYSSLTHD----------HPISSLAWAPG-GDMFAVGSYN-TLRLCDKV-GWSHSLD--KPDTGSVYD 211 (323)
Q Consensus 147 ~~i~v~d~~~~~~~~~~~~~----------~~v~~~~~~p~-~~~l~~~~~~-~i~i~d~~-~~~~~~~--~~~~~~v~~ 211 (323)
+ +|+.+++.+..+.... .....++++|+ +.++++...+ .|++||.. +..+..+ ..+...+..
T Consensus 169 ~---~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~ 245 (329)
T 3fvz_A 169 V---QFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFA 245 (329)
T ss_dssp E---EECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEE
T ss_pred E---EEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcce
Confidence 9 9998888777664322 23889999998 5544444445 99999987 6555544 335567889
Q ss_pred EEEcC------CCCEEEEEecCc-EEEEEcCCCceeeeecC-CCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecc
Q psy11524 212 LVWSN------DATQIAGACANV-IHIFDISSSSSSNVTAP-LSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWS 283 (323)
Q Consensus 212 ~~~~~------~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~ 283 (323)
++++| +|+..++...+. |++||..+++.+..+.. ..+...+..++++|+| ..+..-..++.+.+|++.
T Consensus 246 ~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG----~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 246 ISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG----TVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS----EEEEEESSSCCEEEEEEE
T ss_pred eeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC----CEEEEECCCCEEEEEeCC
Confidence 99999 333222233345 99999999998887310 2456678999999996 444444456678888775
Q ss_pred c
Q psy11524 284 H 284 (323)
Q Consensus 284 ~ 284 (323)
.
T Consensus 322 ~ 322 (329)
T 3fvz_A 322 E 322 (329)
T ss_dssp E
T ss_pred c
Confidence 4
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.71 E-value=7.7e-16 Score=140.65 Aligned_cols=231 Identities=9% Similarity=-0.039 Sum_probs=153.6
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCC----eEEEEeCCCCceeEeeccCCCe--EEEEECCCCCEEEEEcCCCc--------
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKS----LVIKPLSPNNKATKWQAHDGLI--LKVAWCSSTDLILSGGEDCK-------- 145 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~----~~v~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~-------- 145 (323)
|...+.+++|||||++||++.... ..|++||+.++......+...+ ..++|+|||+.|+.++.+..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGG
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccC
Confidence 344689999999999999775432 4799999887632201122222 67899999999999888765
Q ss_pred -----eEeeeEEeCCCCe-----eeEeecCCCceeEEEEecCCCEEEEEeC-C----eEEEEeCCCCeeeecCCCCccEE
Q psy11524 146 -----YKASFVWDTDGRQ-----LYSSLTHDHPISSLAWAPGGDMFAVGSY-N----TLRLCDKVGWSHSLDKPDTGSVY 210 (323)
Q Consensus 146 -----i~~i~v~d~~~~~-----~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~----~i~i~d~~~~~~~~~~~~~~~v~ 210 (323)
|+ +|++.+.. +.....+...+.++.|+|||++|++.+. + .|+++|..+.....+..+...+.
T Consensus 199 ~~~~~v~---~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~ 275 (695)
T 2bkl_A 199 PGYTTIR---YHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKY 275 (695)
T ss_dssp GGGCEEE---EEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCE
T ss_pred CCCCEEE---EEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceE
Confidence 66 99996332 2222334457889999999999887664 3 68888765444444444555566
Q ss_pred EEEEcCCCCEEEEEec----Cc-EEEEEcCCCce--eeeecCCCC-ccceEEEEEccCCCCccceEEEEeCCCCeEEEec
Q psy11524 211 DLVWSNDATQIAGACA----NV-IHIFDISSSSS--SNVTAPLSH-SHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMW 282 (323)
Q Consensus 211 ~~~~~~~~~~l~~~~~----d~-i~iwd~~~~~~--~~~~~~~~~-~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~ 282 (323)
...+ ++|. ++..+. ++ |.+||+.+++. ...+ +..+ ...+..++|+ ++ ..+.....++...+|.+
T Consensus 276 ~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l-~~~~~~~~l~~~~~~-~~----~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 276 EVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEI-VPEDSSASLLSVSIV-GG----HLSLEYLKDATSEVRVA 347 (695)
T ss_dssp EEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEE-ECCCSSCEEEEEEEE-TT----EEEEEEEETTEEEEEEE
T ss_pred EEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEE-ecCCCCCeEEEEEEE-CC----EEEEEEEECCEEEEEEE
Confidence 6666 5666 554443 46 99999987753 1221 2233 4567888888 44 67777777777777655
Q ss_pred c--cc---cCCCC-ccceeEEEEeeCCCeeE----eeecCCeEEEEEee
Q psy11524 283 S--HS---LDKPD-TGSVYDLVWSSDATQIA----GACANGSLLLGTII 321 (323)
Q Consensus 283 ~--~~---~~~~~-~~~v~~~~~s~~g~~l~----s~~~dg~i~~~~l~ 321 (323)
. .. ....+ .+.+..++++|+++.|+ +....++|++|++.
T Consensus 348 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~ 396 (695)
T 2bkl_A 348 TLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVS 396 (695)
T ss_dssp ETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETT
T ss_pred eCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 4 21 12333 56678889999998777 33445789999864
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.69 E-value=1.4e-14 Score=121.85 Aligned_cols=250 Identities=11% Similarity=0.026 Sum_probs=163.1
Q ss_pred EeecccceeEeeEeccCCcceeeeee----------c---cccc-cccceeeecC-------CCCCEEEEEEcCCCCeEE
Q psy11524 39 TIRRYDGTVINYPISPYISVLHSYAA----------S---HSWP-QALSLCRTLN-------VSPPVYSAAWSPDSNKVL 97 (323)
Q Consensus 39 ~~~~~~~~v~~~~~~~~~~~~~~~~~----------~---~~~~-~~~~~~~~~~-------~~~~v~~~~~sp~~~~l~ 97 (323)
.+..+..+ .+.|+|||+.++.... + ..|| .+.+....+. +......++++|||++|+
T Consensus 46 ~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~ 123 (361)
T 2oiz_A 46 MVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIV 123 (361)
T ss_dssp EEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEE
T ss_pred EecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEE
Confidence 44445555 8999999987765431 1 1344 3344444443 234677899999999999
Q ss_pred EEeeC-CeEEEEeCCCCc--eeEeeccCCCeEEEEECCCC-CEEEEEcCCCceEeeeEEeCC--CCeeeE------eecC
Q psy11524 98 LTQAK-SLVIKPLSPNNK--ATKWQAHDGLILKVAWCSST-DLILSGGEDCKYKASFVWDTD--GRQLYS------SLTH 165 (323)
Q Consensus 98 ~~~~~-~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~i~v~d~~--~~~~~~------~~~~ 165 (323)
++... .+.|.+||.... +..+... .....+.+.|++ ..+++.+.||.+. +|+.+ ++.... +...
T Consensus 124 v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~~~~v~~~p~~~~~~~~~~~dg~~~---~v~~~~~g~~~~~~~~~~~~~~~ 199 (361)
T 2oiz_A 124 LQNASPATSIGIVDVAKGDYVEDVTAA-AGCWSVIPQPNRPRSFMTICGDGGLL---TINLGEDGKVASQSRSKQMFSVK 199 (361)
T ss_dssp EEEESSSEEEEEEETTTTEEEEEEGGG-TTEEEEEECTTSSSEEEEEETTSSEE---EEEECTTSSEEEEEECCCCSCTT
T ss_pred EECCCCCCeEEEEECCCCcEEEEEecC-CCcceeEEcCCCCeeEEEECCCCcEE---EEEECCCCcEeeeccccceEcCC
Confidence 98764 579999998776 2220222 223345677875 6778888999998 88874 333311 1112
Q ss_pred CCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeeec-----CC----C----CccEEEEEEcCCCCEEEEEec-----
Q psy11524 166 DHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSLD-----KP----D----TGSVYDLVWSNDATQIAGACA----- 226 (323)
Q Consensus 166 ~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~~-----~~----~----~~~v~~~~~~~~~~~l~~~~~----- 226 (323)
..+ ..+.++|++..++..+.+ .++++|+........ .. . ......++++|+++.++++..
T Consensus 200 ~~~-~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~ 278 (361)
T 2oiz_A 200 DDP-IFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKE 278 (361)
T ss_dssp TSC-BCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCT
T ss_pred CCc-eEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCc
Confidence 222 234456778777777774 999999864322110 00 0 111223789999888877653
Q ss_pred ------Cc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc------cCCCCccc
Q psy11524 227 ------NV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS------LDKPDTGS 293 (323)
Q Consensus 227 ------d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~------~~~~~~~~ 293 (323)
.+ |.+||+.+++.+.+ +..+. +..++|+|+| +.+.+.+. +.+.+|+..+. ....++..
T Consensus 279 ~~~~~~~~~v~viD~~t~~~v~~--i~~~~--p~~ia~spdg----~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~ 349 (361)
T 2oiz_A 279 GTHKFPAAEIWVMDTKTKQRVAR--IPGRD--ALSMTIDQQR----NLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEA 349 (361)
T ss_dssp TCTTCCCSEEEEEETTTTEEEEE--EECTT--CCEEEEETTT----TEEEEECS-SCEEEEECSSSSCEEEEEETTSCSS
T ss_pred ccccCCCceEEEEECCCCcEEEE--EecCC--eeEEEECCCC----CEEEEeCC-CeEEEEECCCCcceeeEEeccCCCC
Confidence 35 99999999999888 44444 8999999999 67777766 78888887653 11223667
Q ss_pred eeEEEEeeCCC
Q psy11524 294 VYDLVWSSDAT 304 (323)
Q Consensus 294 v~~~~~s~~g~ 304 (323)
...++++|+|+
T Consensus 350 P~~~~~~p~G~ 360 (361)
T 2oiz_A 350 SLQVQFHPVGG 360 (361)
T ss_dssp EEEEEECCCSC
T ss_pred cEEEEecCCCC
Confidence 78899999986
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.68 E-value=3.6e-15 Score=124.01 Aligned_cols=227 Identities=7% Similarity=0.024 Sum_probs=157.6
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeee
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLY 160 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~ 160 (323)
...|.+++|+|++..++....+ ..+..| .......+..+...+.+++|+|+|++++++..++.|. +||.++....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~---~~d~~~~~~~ 79 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISE-SELQTI-TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIF---KINPETKEIK 79 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCG-GGSCEE-ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEE---EECTTTCCEE
T ss_pred ccccceeeecCCccceeEEeec-ccCccc-ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEE---EEeCCCCcEE
Confidence 3456778888888776655444 356666 3333556666777789999999999888888889999 9999765555
Q ss_pred Eee-cCCCceeEEEEecCCCEEEEEeCC-----eEEEEeCCCCeee-ecC--CCCccEEEEEEcCCCCEEEEEec-----
Q psy11524 161 SSL-THDHPISSLAWAPGGDMFAVGSYN-----TLRLCDKVGWSHS-LDK--PDTGSVYDLVWSNDATQIAGACA----- 226 (323)
Q Consensus 161 ~~~-~~~~~v~~~~~~p~~~~l~~~~~~-----~i~i~d~~~~~~~-~~~--~~~~~v~~~~~~~~~~~l~~~~~----- 226 (323)
.+. .+...+.+++++|+|+++++...+ .|.+||..+.... ... .....+..++++|+|+++++...
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~ 159 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTN 159 (333)
T ss_dssp EEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTB
T ss_pred EEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccC
Confidence 443 456789999999999877776544 8999998765433 221 23457899999999987776654
Q ss_pred -Cc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEe-CCCCeEEEeccc--cc-----------CCCC
Q psy11524 227 -NV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFID-KNRDLYLSMWSH--SL-----------DKPD 290 (323)
Q Consensus 227 -d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~-~~~~~~~~~~~~--~~-----------~~~~ 290 (323)
.+ |..+|..+++.... ......+..++|+|++ +.+.+.+ .++.+.+|+... .. ...
T Consensus 160 ~~~~l~~~~~~~~~~~~~---~~~~~~~~~i~~~~dg----~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~- 231 (333)
T 2dg1_A 160 PLGGVYYVSPDFRTVTPI---IQNISVANGIALSTDE----KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG- 231 (333)
T ss_dssp CCEEEEEECTTSCCEEEE---EEEESSEEEEEECTTS----SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS-
T ss_pred CCceEEEEeCCCCEEEEe---ecCCCcccceEECCCC----CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCC-
Confidence 35 77777665554332 2223457889999998 5555544 345566666532 00 011
Q ss_pred ccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 291 TGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 291 ~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
...+..++++++|+++++...++.|.+|+.
T Consensus 232 ~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 232 HEGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp SSEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred CCCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 135788999999998888878899999875
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.68 E-value=1.8e-12 Score=105.64 Aligned_cols=229 Identities=10% Similarity=0.007 Sum_probs=157.9
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEee--ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCC
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQ--AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGR 157 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~ 157 (323)
+...+.+++++++|+..++. ...+.|..|+..+....+. .....+.++++.++|.++++...++.|. .|+.+++
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~-~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~---~~~~~g~ 88 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQ-HKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIG---RITKKGI 88 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEE-TTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE---EECTTSC
T ss_pred cCCCccceEECCCCCEEEEe-cCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEE---EECCCCc
Confidence 45789999999999866644 4335889998874444332 3456789999999999888877788898 9998744
Q ss_pred eeeEee--cCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeee-cCCCCccEEEEEEcCCCCEEEEEecCc-EEEE
Q psy11524 158 QLYSSL--THDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSL-DKPDTGSVYDLVWSNDATQIAGACANV-IHIF 232 (323)
Q Consensus 158 ~~~~~~--~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iw 232 (323)
. ..+. .....+.+++++|+|+++++...+ .|..||..+..... .......+..++++++|+..++...++ |..|
T Consensus 89 ~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 89 I-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRI 167 (299)
T ss_dssp E-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred E-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEE
Confidence 3 3332 234578899999999877766554 99999985443332 222445689999999998777666667 9999
Q ss_pred EcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeC-CCCeEEEecccc----cCCCCccceeEEEEeeCCCeeE
Q psy11524 233 DISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDK-NRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIA 307 (323)
Q Consensus 233 d~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~-~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~ 307 (323)
|. +++.... ........+..+++++++. +.+.+. .+.+..++.... ....+...+.+++++++|+.++
T Consensus 168 ~~-~g~~~~~-~~~~~~~~~~~i~~~~~g~-----l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v 240 (299)
T 2z2n_A 168 TE-SGDITEF-KIPTPASGPVGITKGNDDA-----LWFVEIIGNKIGRITTSGEITEFKIPTPNARPHAITAGAGIDLWF 240 (299)
T ss_dssp CT-TCCEEEE-ECSSTTCCEEEEEECTTSS-----EEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred cC-CCcEEEe-eCCCCCCcceeEEECCCCC-----EEEEccCCceEEEECCCCcEEEEECCCCCCCceeEEECCCCCEEE
Confidence 98 6665432 1233445678999999873 333332 344555544111 1112346789999999998777
Q ss_pred eeecCCeEEEEEe
Q psy11524 308 GACANGSLLLGTI 320 (323)
Q Consensus 308 s~~~dg~i~~~~l 320 (323)
+...++.|..|+.
T Consensus 241 ~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 241 TEWGANKIGRLTS 253 (299)
T ss_dssp EETTTTEEEEEET
T ss_pred eccCCceEEEECC
Confidence 6667788888874
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.66 E-value=7.9e-14 Score=127.74 Aligned_cols=219 Identities=10% Similarity=0.019 Sum_probs=144.8
Q ss_pred CCCCeEEEEeeCC----eEEEEeCCCCc-eeEe-------eccCCCeEEEEECCCCCEEEEEcCCC-----ceEeeeEEe
Q psy11524 91 PDSNKVLLTQAKS----LVIKPLSPNNK-ATKW-------QAHDGLILKVAWCSSTDLILSGGEDC-----KYKASFVWD 153 (323)
Q Consensus 91 p~~~~l~~~~~~~----~~v~~~~~~~~-~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~i~v~d 153 (323)
|+|+++++...+. +.++..+..+. ...+ ..+...+..++|||||++||.+..++ .|+ +||
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~---v~d 157 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIK---FMK 157 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEE---EEE
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEE---EEE
Confidence 8999988776442 25666664333 2222 12334688999999999998776543 677 999
Q ss_pred CCCCeeeEeecCCCceeEEEEecCCCEEEEEeCC-e----------------EEEEeCCCCe---eeecC--CCCccEEE
Q psy11524 154 TDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-T----------------LRLCDKVGWS---HSLDK--PDTGSVYD 211 (323)
Q Consensus 154 ~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~----------------i~i~d~~~~~---~~~~~--~~~~~v~~ 211 (323)
+++............+.+++|+|||+.|+.++.+ . |++|++.+.. ..... .+...+..
T Consensus 158 ~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~ 237 (710)
T 2xdw_A 158 VDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGG 237 (710)
T ss_dssp TTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred CCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEE
Confidence 9766554433333346789999999999988864 4 9999987543 22222 24556889
Q ss_pred EEEcCCCCEEEEEec-----Cc-EEEEEcCC------Cc-eeeeecCCCCccceEEEEEccCCCCccceEEEEeCCC---
Q psy11524 212 LVWSNDATQIAGACA-----NV-IHIFDISS------SS-SSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNR--- 275 (323)
Q Consensus 212 ~~~~~~~~~l~~~~~-----d~-i~iwd~~~------~~-~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~--- 275 (323)
+.|+|||++|+..+. +. |++||+.+ +. .... +..+...+.. .|+|+| +.+.+....+
T Consensus 238 ~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~--l~~~~~~~~~-~~s~dg----~~l~~~s~~~~~~ 310 (710)
T 2xdw_A 238 AELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK--LIDNFEGEYD-YVTNEG----TVFTFKTNRHSPN 310 (710)
T ss_dssp EEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE--EECSSSSCEE-EEEEET----TEEEEEECTTCTT
T ss_pred EEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE--eeCCCCcEEE-EEeccC----CEEEEEECCCCCC
Confidence 999999999988765 56 99999976 43 2333 3444444444 488888 5565554322
Q ss_pred -CeEEEecccc-------cCCCCc-cceeEEEEeeCCCeeEeeecCCeEEEEE
Q psy11524 276 -DLYLSMWSHS-------LDKPDT-GSVYDLVWSSDATQIAGACANGSLLLGT 319 (323)
Q Consensus 276 -~~~~~~~~~~-------~~~~~~-~~v~~~~~s~~g~~l~s~~~dg~i~~~~ 319 (323)
.+.++++... +...+. ..+..++|++++.++++...|+..+||.
T Consensus 311 ~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~ 363 (710)
T 2xdw_A 311 YRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQL 363 (710)
T ss_dssp CEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEE
T ss_pred CEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEE
Confidence 3666666442 112212 3688899998888888999999765553
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.65 E-value=1.3e-13 Score=111.23 Aligned_cols=207 Identities=10% Similarity=0.013 Sum_probs=147.0
Q ss_pred CCeEEEEeeCCeEEEEeCCCCc--eeEeeccC-CCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecC-CCc
Q psy11524 93 SNKVLLTQAKSLVIKPLSPNNK--ATKWQAHD-GLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTH-DHP 168 (323)
Q Consensus 93 ~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~-~~~ 168 (323)
++.|++++.+ +.|++||..+. +.++..+. ..+.++.++|+|+++++ .++.|. .||.+++.+..+... ...
T Consensus 5 ~~~lv~~~~~-~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~---~~d~~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 5 QHLLVGGSGW-NKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFS--YSKGAK---MITRDGRELWNIAAPAGCE 78 (276)
T ss_dssp CEEEEECTTC-SEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEE---EECTTSCEEEEEECCTTCE
T ss_pred CcEEEeeCCC-CEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEE---EECCCCCEEEEEcCCCCcc
Confidence 4566665555 69999998444 44555554 46889999999998883 467788 999999888888765 357
Q ss_pred eeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeeeecC------CCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCce
Q psy11524 169 ISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHSLDK------PDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSS 239 (323)
Q Consensus 169 v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~ 239 (323)
+.++.+.|+|+++++.+. + .+..+|..++.+.... .+......+++.++|+++++...++ |..||.. |+.
T Consensus 79 ~~~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 79 MQTARILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEEECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred ccccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 889999999999998887 5 8888888776443221 1223455678899999999999899 9999987 998
Q ss_pred eeeecCCCCccceEEEEEccCCC-----CccceEEEEeCCCCeEEEecccc-cCCCCccceeEEEEeeCCCeeEee
Q psy11524 240 SNVTAPLSHSHEITQLAVNQTGS-----LQERHVAFIDKNRDLYLSMWSHS-LDKPDTGSVYDLVWSSDATQIAGA 309 (323)
Q Consensus 240 ~~~~~~~~~~~~v~~~~~~p~g~-----~~d~~l~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~g~~l~s~ 309 (323)
+.++ ... ....++...++|. ..++.|..++.+....+|.+... .....-..+.+++..++|+++++.
T Consensus 158 ~w~~--~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 158 LNSV--KLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp EEEE--ECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred EEEE--ECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 8873 322 3455677788875 33346667777755567777541 111112347788888999887776
No 188
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.64 E-value=2.7e-14 Score=131.43 Aligned_cols=232 Identities=12% Similarity=0.015 Sum_probs=151.3
Q ss_pred CCEEEEEEcCCCCeEEEEeeCC----eEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCCCc-----------
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKS----LVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGEDCK----------- 145 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~----~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~----------- 145 (323)
..+..++|||||++||++..+. ..|++||+.++ ......+...+..++|+|| +.|+.++.++.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 3678999999999999887542 36999998876 2222222222357899999 98888877654
Q ss_pred eEeeeEEeCCCCe---eeEeec--CCCceeEEEEecCCCEEEEEeC-----C-eEEEEeCCCC--e-eeecCCCCccEEE
Q psy11524 146 YKASFVWDTDGRQ---LYSSLT--HDHPISSLAWAPGGDMFAVGSY-----N-TLRLCDKVGW--S-HSLDKPDTGSVYD 211 (323)
Q Consensus 146 i~~i~v~d~~~~~---~~~~~~--~~~~v~~~~~~p~~~~l~~~~~-----~-~i~i~d~~~~--~-~~~~~~~~~~v~~ 211 (323)
-..|++|++.+.. ...+.. +...+.++.|+|||++|+..+. . .|++||+.+. . ...+..+......
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE
Confidence 2234499985322 222222 2235889999999998877663 2 7999998754 3 4444444444444
Q ss_pred EEEcCCCCEEEEEec----Cc-EEEEEcCCCc-eeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecc--
Q psy11524 212 LVWSNDATQIAGACA----NV-IHIFDISSSS-SSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWS-- 283 (323)
Q Consensus 212 ~~~~~~~~~l~~~~~----d~-i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~-- 283 (323)
. ++|+|+.|+..+. +. |.+||+.++. ....+ +..+...+..++|+ ++ ..+.....++...+|.+.
T Consensus 322 ~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l-~~~~~~~l~~~~~~-~~----~lv~~~~~dg~~~l~~~~~~ 394 (741)
T 1yr2_A 322 F-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTV-VPESKDNLESVGIA-GN----RLFASYIHDAKSQVLAFDLD 394 (741)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEE-ECCCSSEEEEEEEE-BT----EEEEEEEETTEEEEEEEETT
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEE-ecCCCCeEEEEEEE-CC----EEEEEEEECCEEEEEEEeCC
Confidence 4 3488988887765 34 9999988752 22322 34455567777777 33 566777777766666543
Q ss_pred cc---cCCC-CccceeEEEEeeCCCeeE----eeecCCeEEEEEee
Q psy11524 284 HS---LDKP-DTGSVYDLVWSSDATQIA----GACANGSLLLGTII 321 (323)
Q Consensus 284 ~~---~~~~-~~~~v~~~~~s~~g~~l~----s~~~dg~i~~~~l~ 321 (323)
.. .... +.+.+..++++|+++.|+ +....++|++|++.
T Consensus 395 g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 395 GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 21 1222 256788999999998766 33445889999864
No 189
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.64 E-value=2.4e-13 Score=112.76 Aligned_cols=224 Identities=10% Similarity=-0.038 Sum_probs=150.5
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCee
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQL 159 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~ 159 (323)
.....+.+. +..+.++....+.|.++|..+. +.++. ....+..++++++++.+++...++.|. +||..+..+
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~---~iD~~t~~~ 117 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIF---IINPKTYEI 117 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEE---EEETTTTEE
T ss_pred ccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEE---EEECCCCeE
Confidence 456778774 4555555555579999998754 34453 456788999999885544444789999 999975544
Q ss_pred e-EeecCC-----CceeEEEEecCCCEEEEEe--CC-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecC---
Q psy11524 160 Y-SSLTHD-----HPISSLAWAPGGDMFAVGS--YN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACAN--- 227 (323)
Q Consensus 160 ~-~~~~~~-----~~v~~~~~~p~~~~l~~~~--~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--- 227 (323)
. .+.... .....+++ .++ .++++. .+ .|.++|+.+...............++++|+|++++++..+
T Consensus 118 ~~~i~~g~~~~~~~~p~~i~~-~~~-~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~ 195 (328)
T 3dsm_A 118 TGYIECPDMDMESGSTEQMVQ-YGK-YVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEG 195 (328)
T ss_dssp EEEEECTTCCTTTCBCCCEEE-ETT-EEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTT
T ss_pred EEEEEcCCccccCCCcceEEE-ECC-EEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccC
Confidence 3 444322 14567777 344 444444 24 9999998865433222223456788999999977776655
Q ss_pred -------c-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEeccccc------CCCCccc
Q psy11524 228 -------V-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSL------DKPDTGS 293 (323)
Q Consensus 228 -------~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~~------~~~~~~~ 293 (323)
+ |.++|..+++....+.+. .......++|+|++ +.+.+.+. .+.+++..... ...+...
T Consensus 196 ~~~~~~~~~v~~id~~t~~v~~~~~~~-~g~~p~~la~~~d~----~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~ 268 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAETFTVEKQFKFK-LGDWPSEVQLNGTR----DTLYWINN--DIWRMPVEADRVPVRPFLEFRDTK 268 (328)
T ss_dssp CSSCBCCCEEEEEETTTTEEEEEEECC-TTCCCEEEEECTTS----CEEEEESS--SEEEEETTCSSCCSSCSBCCCSSC
T ss_pred CccccCCceEEEEECCCCeEEEEEecC-CCCCceeEEEecCC----CEEEEEcc--EEEEEECCCCceeeeeeecCCCCc
Confidence 7 999999998877663222 23468899999998 77777655 77777776541 1111356
Q ss_pred eeEEEEeeC-CCeeEee----ecCCeEEEEEe
Q psy11524 294 VYDLVWSSD-ATQIAGA----CANGSLLLGTI 320 (323)
Q Consensus 294 v~~~~~s~~-g~~l~s~----~~dg~i~~~~l 320 (323)
...++++|+ ++.+++. ..++.|.+|+.
T Consensus 269 p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 269 YYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp EEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred eEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 889999995 5555555 57889999875
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=6.3e-13 Score=108.55 Aligned_cols=227 Identities=10% Similarity=0.014 Sum_probs=146.4
Q ss_pred ecccceeEeeEeccCCcce-eeeeecc---ccccccceeeec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCC-c
Q psy11524 41 RRYDGTVINYPISPYISVL-HSYAASH---SWPQALSLCRTL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNN-K 114 (323)
Q Consensus 41 ~~~~~~v~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~-~ 114 (323)
..+.....++.|+|++..+ ......+ .|+.... .+.+ .+...+.+++++|+|+.+++...+ +.|..|+... .
T Consensus 24 ~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~-~~i~~~d~~~g~ 101 (296)
T 3e5z_A 24 ADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGL-RRLERQREPGGE 101 (296)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTT-TEEEEECSTTCC
T ss_pred ecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCC-CeEEEEcCCCCc
Confidence 3445556789999998632 2221111 2443333 3333 356789999999999976654333 5899999844 3
Q ss_pred eeEeecc-----CCCeEEEEECCCCCEEEEE----cC-------------CCceEeeeEEeCCCCeeeEeecCCCceeEE
Q psy11524 115 ATKWQAH-----DGLILKVAWCSSTDLILSG----GE-------------DCKYKASFVWDTDGRQLYSSLTHDHPISSL 172 (323)
Q Consensus 115 ~~~~~~~-----~~~v~~~~~~~~~~~l~~~----~~-------------d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~ 172 (323)
...+... ...+..++++|+|+++++. .. .+.|. .++.. .....+.........+
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~---~~~~~-g~~~~~~~~~~~~~gi 177 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVF---RLAPD-GTLSAPIRDRVKPNGL 177 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEE---EECTT-SCEEEEECCCSSEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEE---EECCC-CCEEEeecCCCCCccE
Confidence 3333211 2345689999999988873 21 23444 66666 4445555566678899
Q ss_pred EEecCCCEEEEEeCC-eEEEEeCC-CCee----eecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecC
Q psy11524 173 AWAPGGDMFAVGSYN-TLRLCDKV-GWSH----SLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAP 245 (323)
Q Consensus 173 ~~~p~~~~l~~~~~~-~i~i~d~~-~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~ 245 (323)
+|+|+|+.+++.+.+ .|++||+. .... ..+..+...+..++++++|+++++. ++ |.+||.. ++.+.. +
T Consensus 178 ~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~--~ 252 (296)
T 3e5z_A 178 AFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGR--V 252 (296)
T ss_dssp EECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEE--E
T ss_pred EECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEE--E
Confidence 999999998554444 99999985 2222 2223345567889999999866655 66 9999976 666666 3
Q ss_pred CCCccceEEEEE-ccCCCCccceEEEEeCCCCeEEEeccc
Q psy11524 246 LSHSHEITQLAV-NQTGSLQERHVAFIDKNRDLYLSMWSH 284 (323)
Q Consensus 246 ~~~~~~v~~~~~-~p~g~~~d~~l~~~~~~~~~~~~~~~~ 284 (323)
..+.. +.+++| +|++ +.|.+.+.+ .+..++...
T Consensus 253 ~~~~~-~~~~~f~~~d~----~~L~v~t~~-~l~~~~~~~ 286 (296)
T 3e5z_A 253 LTPQT-TSNLCFGGPEG----RTLYMTVST-EFWSIETNV 286 (296)
T ss_dssp ECSSC-CCEEEEESTTS----CEEEEEETT-EEEEEECSC
T ss_pred ECCCC-ceeEEEECCCC----CEEEEEcCC-eEEEEEccc
Confidence 44445 889999 5787 778887764 344444443
No 191
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.62 E-value=1.1e-13 Score=116.33 Aligned_cols=224 Identities=8% Similarity=-0.040 Sum_probs=141.4
Q ss_pred EEEEcCCCCeEEEEee---------CCeEEEEeCCCCc--eeEeecc------CCCeEEEEECCCCCEEEEEcC--CCce
Q psy11524 86 SAAWSPDSNKVLLTQA---------KSLVIKPLSPNNK--ATKWQAH------DGLILKVAWCSSTDLILSGGE--DCKY 146 (323)
Q Consensus 86 ~~~~sp~~~~l~~~~~---------~~~~v~~~~~~~~--~~~~~~~------~~~v~~~~~~~~~~~l~~~~~--d~~i 146 (323)
.++|+|||++++++.. .++.|.+||.... ...+... ......++++|||++|++++. +++|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v 133 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSI 133 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeE
Confidence 8999999999998863 2357999998654 3334322 234668999999999998874 5789
Q ss_pred EeeeEEeCCCCeeeEe-ecCCCceeEEEEecCC-CEEEEEeCC-eEEEEeCCC--Cee------eecCCCCccEEEEEEc
Q psy11524 147 KASFVWDTDGRQLYSS-LTHDHPISSLAWAPGG-DMFAVGSYN-TLRLCDKVG--WSH------SLDKPDTGSVYDLVWS 215 (323)
Q Consensus 147 ~~i~v~d~~~~~~~~~-~~~~~~v~~~~~~p~~-~~l~~~~~~-~i~i~d~~~--~~~------~~~~~~~~~v~~~~~~ 215 (323)
. +||++...+... .... ....+.+.|++ ..+++.+.+ .+.+|+... ... ..+.....+ ..+.++
T Consensus 134 ~---v~d~~~~~~~~~~i~~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 208 (361)
T 2oiz_A 134 G---IVDVAKGDYVEDVTAAA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPA 208 (361)
T ss_dssp E---EEETTTTEEEEEEGGGT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCE
T ss_pred E---EEECCCCcEEEEEecCC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEec
Confidence 9 999975443332 2222 22335677765 456666664 888888643 222 111112222 233446
Q ss_pred CCCCEEEEEecCc-EEEEEcCCCcee--eeecCCC--------CccceEEEEEccCCCCccceEEEEeC-----------
Q psy11524 216 NDATQIAGACANV-IHIFDISSSSSS--NVTAPLS--------HSHEITQLAVNQTGSLQERHVAFIDK----------- 273 (323)
Q Consensus 216 ~~~~~l~~~~~d~-i~iwd~~~~~~~--~~~~~~~--------~~~~v~~~~~~p~g~~~d~~l~~~~~----------- 273 (323)
|++..++..+.++ +.++|+..+... ....... .......++|+|++ +.+.+...
T Consensus 209 ~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg----~~lyv~~~~~~~~~~~~~~ 284 (361)
T 2oiz_A 209 LDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRAS----GRMYVFMHPDGKEGTHKFP 284 (361)
T ss_dssp ECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTT----TEEEEEEESSCCTTCTTCC
T ss_pred ccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCC----CeEEEEEccCCCcccccCC
Confidence 7787788888888 999998755422 1110111 00112236889987 56655432
Q ss_pred CCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 274 NRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 274 ~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
...+.+|+..+. ....+. +.+++|+|||++|++++. +.|.+|+..
T Consensus 285 ~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 285 AAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp CSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECS
T ss_pred CceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECC
Confidence 234666666554 222323 899999999999998887 999999864
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.62 E-value=1.2e-12 Score=107.64 Aligned_cols=228 Identities=8% Similarity=-0.029 Sum_probs=147.8
Q ss_pred CCCEEEEEEcCCCCeEEE-------EeeCCeEEEEeCCCCc-eeEeec-----cCCCeEEEEECCC-CCEEEEEcCCCce
Q psy11524 81 SPPVYSAAWSPDSNKVLL-------TQAKSLVIKPLSPNNK-ATKWQA-----HDGLILKVAWCSS-TDLILSGGEDCKY 146 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~-------~~~~~~~v~~~~~~~~-~~~~~~-----~~~~v~~~~~~~~-~~~l~~~~~d~~i 146 (323)
-....+++|+++|..+++ ...+ +.|+.|+..+. ...+.. +...+.+++++++ |+++++.. .+.|
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l 94 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPA-GEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGL 94 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEEC-CEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCC-CEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCE
Confidence 445689999999976665 3344 58999986443 444433 4567899999999 76555544 4467
Q ss_pred EeeeEEeCCCCeeeEe-ec-----CCCceeEEEEecCCCEEEEEeC----------------CeEEEEeCCCCeeeecCC
Q psy11524 147 KASFVWDTDGRQLYSS-LT-----HDHPISSLAWAPGGDMFAVGSY----------------NTLRLCDKVGWSHSLDKP 204 (323)
Q Consensus 147 ~~i~v~d~~~~~~~~~-~~-----~~~~v~~~~~~p~~~~l~~~~~----------------~~i~i~d~~~~~~~~~~~ 204 (323)
. +||.+ .....+ .. ....+.+++++|+|+++++... +.|..+|..+.. .....
T Consensus 95 ~---~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~-~~~~~ 169 (314)
T 1pjx_A 95 L---VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDGQM-IQVDT 169 (314)
T ss_dssp E---EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTSCE-EEEEE
T ss_pred E---EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCCCCE-EEecc
Confidence 7 99988 444433 21 1235789999999987766543 257777766432 22222
Q ss_pred CCccEEEEEEc----CCCCEEEEEe-cCc-EEEEEcC-CCce-----eeeecCCCCc-cceEEEEEccCCCCccceEEEE
Q psy11524 205 DTGSVYDLVWS----NDATQIAGAC-ANV-IHIFDIS-SSSS-----SNVTAPLSHS-HEITQLAVNQTGSLQERHVAFI 271 (323)
Q Consensus 205 ~~~~v~~~~~~----~~~~~l~~~~-~d~-i~iwd~~-~~~~-----~~~~~~~~~~-~~v~~~~~~p~g~~~d~~l~~~ 271 (323)
+......++|+ |+|+.|+.+. .++ |.+||.. +++. ... +..+. ..+..++++++| ......
T Consensus 170 ~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~--~~~~~~~~p~~i~~d~~G----~l~v~~ 243 (314)
T 1pjx_A 170 AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH--IPGTHEGGADGMDFDEDN----NLLVAN 243 (314)
T ss_dssp EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE--CCCCSSCEEEEEEEBTTC----CEEEEE
T ss_pred CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE--CCCCCCCCCCceEECCCC----CEEEEE
Confidence 33457889999 9997666554 566 9999976 4432 222 33333 567889999987 333332
Q ss_pred eCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeE-eeecCCeEEEEEee
Q psy11524 272 DKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIA-GACANGSLLLGTII 321 (323)
Q Consensus 272 ~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~-s~~~dg~i~~~~l~ 321 (323)
..++.+..|+..+. ....+...+.+++|+|+|+.|+ +...++.|..+++.
T Consensus 244 ~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 244 WGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp ETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred cCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 34566777776522 1223346789999999999554 55566888888763
No 193
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.61 E-value=1.1e-12 Score=107.65 Aligned_cols=225 Identities=10% Similarity=0.012 Sum_probs=149.1
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCe
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQ 158 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~ 158 (323)
........+.|+|+|+.|+..+..++.|+.|+..+....+..+...+..++++++|+++++...++.|. +|+.+++.
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~---~~~~~g~~ 118 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAIT---RSDADGQA 118 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEE---EECTTSCE
T ss_pred cCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEE---EECCCCCE
Confidence 456677899999999977777666678999988666666666777899999999999777666667888 99987543
Q ss_pred eeEeecC-----CCceeEEEEecCCCEEEE----Ee--------------CCeEEEEeCCCCeeeecCCCCccEEEEEEc
Q psy11524 159 LYSSLTH-----DHPISSLAWAPGGDMFAV----GS--------------YNTLRLCDKVGWSHSLDKPDTGSVYDLVWS 215 (323)
Q Consensus 159 ~~~~~~~-----~~~v~~~~~~p~~~~l~~----~~--------------~~~i~i~d~~~~~~~~~~~~~~~v~~~~~~ 215 (323)
..+... ...+..++++|+|+++++ +. .+.|+.+|..+....... .......++|+
T Consensus 119 -~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~s 196 (305)
T 3dr2_A 119 -HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFS 196 (305)
T ss_dssp -EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEEC
T ss_pred -EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEc
Confidence 333211 124678999999998876 32 126888887543333222 34567889999
Q ss_pred CCCCEEEEEecC------c-EEEEEcCCCceee--eecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-
Q psy11524 216 NDATQIAGACAN------V-IHIFDISSSSSSN--VTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS- 285 (323)
Q Consensus 216 ~~~~~l~~~~~d------~-i~iwd~~~~~~~~--~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~- 285 (323)
|+++.|+.+... + |++||+..+.... .+ ..........++++++|+ |.+... +.+.+|+....
T Consensus 197 pdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~-~~~~~~~pdgi~~d~~G~-----lwv~~~-~gv~~~~~~g~~ 269 (305)
T 3dr2_A 197 PDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHF-ASVPDGLPDGFCVDRGGW-----LWSSSG-TGVCVFDSDGQL 269 (305)
T ss_dssp TTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEE-ECCSSSCCCSEEECTTSC-----EEECCS-SEEEEECTTSCE
T ss_pred CCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEE-EECCCCCCCeEEECCCCC-----EEEecC-CcEEEECCCCCE
Confidence 999988777654 6 9999987654111 10 111233455688888873 333332 23444444321
Q ss_pred --cCCCCccceeEEEEeeCCCeeEeeecCCeEE
Q psy11524 286 --LDKPDTGSVYDLVWSSDATQIAGACANGSLL 316 (323)
Q Consensus 286 --~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~ 316 (323)
.... ...+.+++|+|+++.|..++.++..+
T Consensus 270 ~~~~~~-~~~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 270 LGHIPT-PGTASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp EEEEEC-SSCCCEEEECTTSCEEEEEETTEEEE
T ss_pred EEEEEC-CCceeEEEEeCCCCEEEEEcCCeEEE
Confidence 1111 22588999999999888888765443
No 194
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.61 E-value=5.9e-11 Score=96.67 Aligned_cols=266 Identities=9% Similarity=-0.016 Sum_probs=166.5
Q ss_pred cccceeEeeEeccCCcceeeeeecc---ccccccceee-ec-CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCcee
Q psy11524 42 RYDGTVINYPISPYISVLHSYAASH---SWPQALSLCR-TL-NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKAT 116 (323)
Q Consensus 42 ~~~~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~-~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~ 116 (323)
.....+.++.+.++|.....-...+ .++...+... .+ .....+.+++++++|+..++. ...+.|..++..+...
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~-~~~~~v~~~d~~g~~~ 95 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTE-NGANKIGKLSKKGGFT 95 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEE-TTTTEEEEECTTSCEE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEe-cCCCeEEEECCCCCeE
Confidence 3345667888888875332111111 1333322211 11 234679999999999866654 4335888898775544
Q ss_pred Eee--ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeE-eecCCCceeEEEEecCCCEEEEEeCC-eEEEE
Q psy11524 117 KWQ--AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYS-SLTHDHPISSLAWAPGGDMFAVGSYN-TLRLC 192 (323)
Q Consensus 117 ~~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~ 192 (323)
.+. .....+.++++.++|+++++...++.|. .++.+++.... +......+..++++++|+++++...+ .|..+
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~---~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIG---KLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETTTTEEE---EECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EecCCCCCCCCccceECCCCCEEEEccCCCeEE---EECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 332 2346789999999999888877788888 99988444322 22234568899999999865555444 89999
Q ss_pred eCCCCeeee-cCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEE
Q psy11524 193 DKVGWSHSL-DKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAF 270 (323)
Q Consensus 193 d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~ 270 (323)
|..+..... .......+..++++++|+..++....+ |.+||. +++..... .......+.+++++++|. |.+
T Consensus 173 ~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~-----l~v 245 (300)
T 2qc5_A 173 TNTGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYD-IPTPNARPHAITAGKNSE-----IWF 245 (300)
T ss_dssp CTTCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECSTTC-----EEE
T ss_pred CCCCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEE-CCCCCCCceEEEECCCCC-----EEE
Confidence 986543332 222345689999999998766666667 999997 55544321 333456688999999873 333
Q ss_pred EeC-CCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 271 IDK-NRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 271 ~~~-~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
.+. ++.+..++.... ........+.+++++++|++.++.. + .|..++.
T Consensus 246 ~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 246 TEWGANQIGRITNDNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNL 298 (300)
T ss_dssp EETTTTEEEEECTTSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEE
T ss_pred eccCCCeEEEECCCCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCC
Confidence 332 234444443211 0111245678999999998666555 4 6666654
No 195
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.60 E-value=2.7e-12 Score=104.84 Aligned_cols=219 Identities=13% Similarity=0.056 Sum_probs=141.6
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeee
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLY 160 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~ 160 (323)
..-..+..|+|++..|+......+.|+.|+..+...........+.+++++|+|+++++. +..|. +||.++....
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~v~~--~~~l~---~~d~~~g~~~ 86 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYVATI--GTKFC---ALNWKEQSAV 86 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEEEEE--TTEEE---EEETTTTEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEEEEE--CCeEE---EEECCCCcEE
Confidence 345678999998877777766667899999876633333456789999999999965553 55677 9999765555
Q ss_pred EeecC-----CCceeEEEEecCCCEEEEEeC----------C--eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEE
Q psy11524 161 SSLTH-----DHPISSLAWAPGGDMFAVGSY----------N--TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAG 223 (323)
Q Consensus 161 ~~~~~-----~~~v~~~~~~p~~~~l~~~~~----------~--~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 223 (323)
.+... ...+..++++|+|+++++... . .|+.+|..+.... ..........++|+|+++.|+.
T Consensus 87 ~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 87 VLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEE
T ss_pred EEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEE
Confidence 44322 235788999999997665421 1 4555555443322 2223345789999999997765
Q ss_pred Ee-cCc-EEEEEc--CCCceee--ee-cCCCCccceEEEEEccCCCCccceEEEEe-CCCCeEEEecccc----cCCCCc
Q psy11524 224 AC-ANV-IHIFDI--SSSSSSN--VT-APLSHSHEITQLAVNQTGSLQERHVAFID-KNRDLYLSMWSHS----LDKPDT 291 (323)
Q Consensus 224 ~~-~d~-i~iwd~--~~~~~~~--~~-~~~~~~~~v~~~~~~p~g~~~d~~l~~~~-~~~~~~~~~~~~~----~~~~~~ 291 (323)
+. .++ |.+||+ .++.... .+ .+.........++++++| + |.+.. ..+.+..|+..++ ....+.
T Consensus 166 ~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G----~-lwva~~~~~~v~~~d~~tG~~~~~i~~p~ 240 (297)
T 3g4e_A 166 IDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG----K-LWVACYNGGRVIRLDPVTGKRLQTVKLPV 240 (297)
T ss_dssp EEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS----C-EEEEEETTTEEEEECTTTCCEEEEEECSS
T ss_pred ecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC----C-EEEEEcCCCEEEEEcCCCceEEEEEECCC
Confidence 54 456 999987 4554321 10 123334567889999987 3 33332 2344566665422 222335
Q ss_pred cceeEEEEe-eCCCeeEeee
Q psy11524 292 GSVYDLVWS-SDATQIAGAC 310 (323)
Q Consensus 292 ~~v~~~~~s-~~g~~l~s~~ 310 (323)
..+++++|. |+++.|+.++
T Consensus 241 ~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 241 DKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp SBEEEEEEESGGGCEEEEEE
T ss_pred CCceEEEEeCCCCCEEEEEc
Confidence 678999999 8988776444
No 196
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.60 E-value=4.2e-12 Score=105.16 Aligned_cols=217 Identities=10% Similarity=-0.013 Sum_probs=138.3
Q ss_pred CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEe
Q psy11524 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSS 162 (323)
Q Consensus 83 ~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~ 162 (323)
-..++.|+|+++.++......+.|+.|+..+...........+.+++|+|+|+++++. .+ .|. +||.++.....+
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~-~~-gl~---~~d~~~g~~~~~ 124 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS-DD-GLF---LRDTATGVLTLH 124 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE-TT-EEE---EEETTTCCEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE-CC-CEE---EEECCCCcEEEE
Confidence 4578899998777777765557899998876533222345689999999999877765 33 477 999865554444
Q ss_pred ecC-----CCceeEEEEecCCCEEEEEeC-------CeEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEe-cCc-
Q psy11524 163 LTH-----DHPISSLAWAPGGDMFAVGSY-------NTLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGAC-ANV- 228 (323)
Q Consensus 163 ~~~-----~~~v~~~~~~p~~~~l~~~~~-------~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~- 228 (323)
... ...+.+++++|+|+++++... +.|+.+| .+ ..............++|+|+|+.|+.+. .++
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~g-~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-KG-KVTKLFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-TT-EEEEEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-CC-cEEEeeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 322 235889999999997665531 2566677 43 3332222334577899999998776654 456
Q ss_pred EEEEEcC--CC-cee--eee-cCCCCccceEEEEEccCCCCccceEEEEe-CCCCeEEEecccc---cCCCCccceeEEE
Q psy11524 229 IHIFDIS--SS-SSS--NVT-APLSHSHEITQLAVNQTGSLQERHVAFID-KNRDLYLSMWSHS---LDKPDTGSVYDLV 298 (323)
Q Consensus 229 i~iwd~~--~~-~~~--~~~-~~~~~~~~v~~~~~~p~g~~~d~~l~~~~-~~~~~~~~~~~~~---~~~~~~~~v~~~~ 298 (323)
|.+||+. ++ +.. ..+ .+.........++++++| . +.+.. ..+.+..++.... ....+...+.+++
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G----~-lwva~~~~~~v~~~d~~g~~~~~i~~~~~~~~~~a 277 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG----H-IWNARWGEGAVDRYDTDGNHIARYEVPGKQTTCPA 277 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS----C-EEEEEETTTEEEEECTTCCEEEEEECSCSBEEEEE
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC----C-EEEEEeCCCEEEEECCCCCEEEEEECCCCCcEEEE
Confidence 9999986 55 321 110 023334556788999887 2 33332 2344555554321 1223345789999
Q ss_pred Ee-eCCCeeEeeec
Q psy11524 299 WS-SDATQIAGACA 311 (323)
Q Consensus 299 ~s-~~g~~l~s~~~ 311 (323)
|+ |+++.|+.++.
T Consensus 278 f~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 278 FIGPDASRLLVTSA 291 (326)
T ss_dssp EESTTSCEEEEEEB
T ss_pred EecCCCCEEEEEec
Confidence 98 88887754443
No 197
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.59 E-value=4.2e-11 Score=97.54 Aligned_cols=229 Identities=9% Similarity=-0.016 Sum_probs=155.4
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEe--eccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCC
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKW--QAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGR 157 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~ 157 (323)
....+.+++++++|+..++. ...+.|..++..+....+ ......+.++++.++|+++++...++.|. .+|.+++
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~---~~d~~g~ 93 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQ-HKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIG---KLSKKGG 93 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEE-TTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE---EECTTSC
T ss_pred CCCCcceeeECCCCCEEEEc-CCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEE---EECCCCC
Confidence 46788999999999866654 333588889887444333 23346789999999999888777788898 9998844
Q ss_pred eeeEee--cCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeee-cCCCCccEEEEEEcCCCCEEEEEecCc-EEEE
Q psy11524 158 QLYSSL--THDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSL-DKPDTGSVYDLVWSNDATQIAGACANV-IHIF 232 (323)
Q Consensus 158 ~~~~~~--~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iw 232 (323)
. ..+. .....+.+++++++|+++++...+ .|..+|..+..... .......+..++++++|+..++...++ |..+
T Consensus 94 ~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 172 (300)
T 2qc5_A 94 F-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRI 172 (300)
T ss_dssp E-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred e-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEE
Confidence 3 3332 234568999999999877766554 99999987543332 222345789999999998666655567 9999
Q ss_pred EcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCC-CCeEEEecccc----cCCCCccceeEEEEeeCCCeeE
Q psy11524 233 DISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKN-RDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIA 307 (323)
Q Consensus 233 d~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~-~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~ 307 (323)
|. +++.... ........+..++++++| .+.+.+.. +.+..++.... ....+...+.+++++++|+..+
T Consensus 173 ~~-~g~~~~~-~~~~~~~~~~~i~~d~~g-----~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v 245 (300)
T 2qc5_A 173 TN-TGKLEEY-PLPTNAAAPVGITSGNDG-----ALWFVEIMGNKIGRITTTGEISEYDIPTPNARPHAITAGKNSEIWF 245 (300)
T ss_dssp CT-TCCEEEE-ECSSTTCCEEEEEECTTS-----SEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECSTTCEEE
T ss_pred CC-CCcEEEe-eCCCCCCCcceEEECCCC-----CEEEEccCCCEEEEEcCCCcEEEEECCCCCCCceEEEECCCCCEEE
Confidence 98 5554432 133344568899999986 33343332 33444444211 1112245688999999998777
Q ss_pred eeecCCeEEEEEe
Q psy11524 308 GACANGSLLLGTI 320 (323)
Q Consensus 308 s~~~dg~i~~~~l 320 (323)
+...++.|..++.
T Consensus 246 ~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 246 TEWGANQIGRITN 258 (300)
T ss_dssp EETTTTEEEEECT
T ss_pred eccCCCeEEEECC
Confidence 6666788887764
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.59 E-value=2e-13 Score=124.74 Aligned_cols=215 Identities=7% Similarity=-0.056 Sum_probs=139.3
Q ss_pred cccceeEeeEeccCCcceeeeee-ccccccccceeee-------cCCCCCE--EEEEEcCCCCeEEEEeeCC--------
Q psy11524 42 RYDGTVINYPISPYISVLHSYAA-SHSWPQALSLCRT-------LNVSPPV--YSAAWSPDSNKVLLTQAKS-------- 103 (323)
Q Consensus 42 ~~~~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------~~~~~~v--~~~~~sp~~~~l~~~~~~~-------- 103 (323)
+|...+.++.|||||+.++.... +|+.+.++.++.. ..+...+ ..++|+|||+.|++++.+.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 45667889999999987764443 3432223322211 1122222 6899999999999987653
Q ss_pred ----eEEEEeCCCCce----eEe--eccCCCeEEEEECCCCCEEEEEcCCC-ceEeeeEEeCCCCeeeEeecCCCceeEE
Q psy11524 104 ----LVIKPLSPNNKA----TKW--QAHDGLILKVAWCSSTDLILSGGEDC-KYKASFVWDTDGRQLYSSLTHDHPISSL 172 (323)
Q Consensus 104 ----~~v~~~~~~~~~----~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~-~i~~i~v~d~~~~~~~~~~~~~~~v~~~ 172 (323)
..|++|++.+.. ..+ ..+...+..+.|+|||++|+..+.++ .-..|++++..+.....+..+...+...
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~ 277 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEV 277 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEE
Confidence 239999887652 222 23456788999999999988877665 2223348877555566666666666666
Q ss_pred EEecCCCEEEEEeC----C-eEEEEeCCCCe----eeecCCC-CccEEEEEEcCCCCEEEEEecCc-EEEEEcC-CCcee
Q psy11524 173 AWAPGGDMFAVGSY----N-TLRLCDKVGWS----HSLDKPD-TGSVYDLVWSNDATQIAGACANV-IHIFDIS-SSSSS 240 (323)
Q Consensus 173 ~~~p~~~~l~~~~~----~-~i~i~d~~~~~----~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~-~~~~~ 240 (323)
.+ ++|. ++..+. + .|.+||+.+.. ......+ ...+..++|+ ++.++++...|+ .+||.+. +++..
T Consensus 278 ~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~ 354 (695)
T 2bkl_A 278 HA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPV 354 (695)
T ss_dssp EE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEE
T ss_pred Ee-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCee
Confidence 66 5666 554443 3 89999987532 2333333 4467888998 677888888888 6666543 35555
Q ss_pred eeecCCCC-ccceEEEEEccCC
Q psy11524 241 NVTAPLSH-SHEITQLAVNQTG 261 (323)
Q Consensus 241 ~~~~~~~~-~~~v~~~~~~p~g 261 (323)
.. +..+ ...+..++++|++
T Consensus 355 ~~--l~~~~~~~v~~~~~s~d~ 374 (695)
T 2bkl_A 355 RT--VQLPGVGAASNLMGLEDL 374 (695)
T ss_dssp EE--CCCSSSSEECCCBSCTTC
T ss_pred EE--ecCCCCeEEEEeecCCCC
Confidence 54 3333 5667778888887
No 199
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.57 E-value=2.8e-11 Score=107.02 Aligned_cols=264 Identities=8% Similarity=-0.048 Sum_probs=168.9
Q ss_pred eeEeeEeccCCcceeeeeecc---cccc---ccceeeecCCCCCEEEEEEc----CCCCeEEEEeeCCeEEEEeCCCCc-
Q psy11524 46 TVINYPISPYISVLHSYAASH---SWPQ---ALSLCRTLNVSPPVYSAAWS----PDSNKVLLTQAKSLVIKPLSPNNK- 114 (323)
Q Consensus 46 ~v~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~v~~~~~s----p~~~~l~~~~~~~~~v~~~~~~~~- 114 (323)
.+..+.|+|||+.++....++ .+|. +.++...+........++|+ |||++++++....+.+.++|..+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLE 277 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCc
Confidence 345789999998766433222 1342 55555666666677899999 799999999888789999987654
Q ss_pred -eeEeec----------cCC-CeEEEEECCCCCE-EEEEcCCCceEeeeEEeCCCC-e--eeEeecCCCceeEEEEecCC
Q psy11524 115 -ATKWQA----------HDG-LILKVAWCSSTDL-ILSGGEDCKYKASFVWDTDGR-Q--LYSSLTHDHPISSLAWAPGG 178 (323)
Q Consensus 115 -~~~~~~----------~~~-~v~~~~~~~~~~~-l~~~~~d~~i~~i~v~d~~~~-~--~~~~~~~~~~v~~~~~~p~~ 178 (323)
+..+.. |.. .+..+..++++.. ++....+|.|. ++|.... . +..+ .......++.|+|+|
T Consensus 278 ~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~---~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdg 353 (567)
T 1qks_A 278 PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKIL---LVDYTDLNNLKTTEI-SAERFLHDGGLDGSH 353 (567)
T ss_dssp EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEE---EEETTCSSEEEEEEE-ECCSSEEEEEECTTS
T ss_pred EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEE---EEecCCCccceeeee-eccccccCceECCCC
Confidence 333321 222 6788999998654 45555678888 9998532 1 2222 234457789999999
Q ss_pred CEEEEEeC--CeEEEEeCCCCeee-ec-----CCCCccEEEEEEcCCCCEEE-EEe-cCc-EEEEEcCC-------Ccee
Q psy11524 179 DMFAVGSY--NTLRLCDKVGWSHS-LD-----KPDTGSVYDLVWSNDATQIA-GAC-ANV-IHIFDISS-------SSSS 240 (323)
Q Consensus 179 ~~l~~~~~--~~i~i~d~~~~~~~-~~-----~~~~~~v~~~~~~~~~~~l~-~~~-~d~-i~iwd~~~-------~~~~ 240 (323)
++++++.. +.|.++|+.+.++. .. ..|.+.-..+ ++|++..+. +.. .++ |.++|..+ .+.+
T Consensus 354 r~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv 432 (567)
T 1qks_A 354 RYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKIL 432 (567)
T ss_dssp CEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEE
T ss_pred CEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEE
Confidence 99988876 49999998865433 11 1233222222 688755544 443 356 99999887 5566
Q ss_pred eeecCCCCccceEEEEEccCCCCccceEEEEeC-------CCCeEEEecccc-----c-------------CCCCcccee
Q psy11524 241 NVTAPLSHSHEITQLAVNQTGSLQERHVAFIDK-------NRDLYLSMWSHS-----L-------------DKPDTGSVY 295 (323)
Q Consensus 241 ~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~-------~~~~~~~~~~~~-----~-------------~~~~~~~v~ 295 (323)
+++ ......-..++.+|++ ..+.+-.. ...+.++++... . .......+.
T Consensus 433 ~~i--~~~g~g~~~i~~~p~~----~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 506 (567)
T 1qks_A 433 DSF--PALGGGSLFIKTHPNS----QYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVV 506 (567)
T ss_dssp EEE--ECSCSCCCCEECCTTC----SEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEE
T ss_pred EEE--ecCCCCCEEEEeCCCC----CeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceE
Confidence 663 3222233446789998 45554331 234555555442 0 000135789
Q ss_pred EEEEeeCCCeeEeee-----cCCeEEEEEe
Q psy11524 296 DLVWSSDATQIAGAC-----ANGSLLLGTI 320 (323)
Q Consensus 296 ~~~~s~~g~~l~s~~-----~dg~i~~~~l 320 (323)
.+.|+|+|+++..+. .++.|.++|.
T Consensus 507 ~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 507 QGEFNKDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp EEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred eeeECCCCCEEEEEeecCCCCCCcEEEEEC
Confidence 999999999777553 3788999874
No 200
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=8.6e-12 Score=110.30 Aligned_cols=242 Identities=10% Similarity=0.005 Sum_probs=156.8
Q ss_pred cccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCC--Cc--eeEeeccCCCeEEEEEC----CCCCEEEEEc
Q psy11524 70 QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPN--NK--ATKWQAHDGLILKVAWC----SSTDLILSGG 141 (323)
Q Consensus 70 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~--~~--~~~~~~~~~~v~~~~~~----~~~~~l~~~~ 141 (323)
.+.++...+.....+..+.|+|||+++++++.+ +.|.+||+. +. ...+.. ......++|+ |||+++++++
T Consensus 185 ~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~d-g~V~viD~~~~t~~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n 262 (567)
T 1qks_A 185 STYEIKTVLDTGYAVHISRLSASGRYLFVIGRD-GKVNMIDLWMKEPTTVAEIKI-GSEARSIETSKMEGWEDKYAIAGA 262 (567)
T ss_dssp TTCCEEEEEECSSCEEEEEECTTSCEEEEEETT-SEEEEEETTSSSCCEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEE
T ss_pred CCCeEEEEEeCCCCccceEECCCCCEEEEEcCC-CeEEEEECCCCCCcEeEEEec-CCCCceeEEccccCCCCCEEEEEE
Confidence 345566667677788899999999999988765 689999984 32 344443 3346799999 6999888776
Q ss_pred C-CCceEeeeEEeCC-CCeeeEeecC-----------CCceeEEEEecCCCEEEEEeC--CeEEEEeCCCCe-ee-ecCC
Q psy11524 142 E-DCKYKASFVWDTD-GRQLYSSLTH-----------DHPISSLAWAPGGDMFAVGSY--NTLRLCDKVGWS-HS-LDKP 204 (323)
Q Consensus 142 ~-d~~i~~i~v~d~~-~~~~~~~~~~-----------~~~v~~~~~~p~~~~l~~~~~--~~i~i~d~~~~~-~~-~~~~ 204 (323)
. ++.+. ++|.. .+.+..+... ...+..+..++++..+++... +.|.++|..... .. ....
T Consensus 263 ~~~~~v~---ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~ 339 (567)
T 1qks_A 263 YWPPQYV---IMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS 339 (567)
T ss_dssp EETTEEE---EEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE
T ss_pred ccCCeEE---EEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee
Confidence 5 58899 99985 4555444321 125778889998777666555 499999976431 11 1112
Q ss_pred CCccEEEEEEcCCCCEEEEEec-Cc-EEEEEcCCCceeeeecC-C--CCccceEEEEEccCCCCccceEEE-Ee-CCCCe
Q psy11524 205 DTGSVYDLVWSNDATQIAGACA-NV-IHIFDISSSSSSNVTAP-L--SHSHEITQLAVNQTGSLQERHVAF-ID-KNRDL 277 (323)
Q Consensus 205 ~~~~v~~~~~~~~~~~l~~~~~-d~-i~iwd~~~~~~~~~~~~-~--~~~~~v~~~~~~p~g~~~d~~l~~-~~-~~~~~ 277 (323)
.......+.|+|+|++++++.. ++ |.++|..+++.+..+.. . .|.+.-..+ ++|++ +.+.+ .. .++.+
T Consensus 340 ~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~----g~v~~t~~~g~~~V 414 (567)
T 1qks_A 340 AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTF----GPVWATSHMGDDSV 414 (567)
T ss_dssp CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTT----EEEEEEEBSSSSEE
T ss_pred ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCC----CcEEEeCCCCCCeE
Confidence 3445778999999999888775 44 99999999988776433 1 232212122 57765 33332 22 22445
Q ss_pred EEEecccc-----------cCCCCccceeEEEEeeCCCeeEeeec-------CCeEEEEEee
Q psy11524 278 YLSMWSHS-----------LDKPDTGSVYDLVWSSDATQIAGACA-------NGSLLLGTII 321 (323)
Q Consensus 278 ~~~~~~~~-----------~~~~~~~~v~~~~~s~~g~~l~s~~~-------dg~i~~~~l~ 321 (323)
.+++.... ..+..+..-..+..+|++++|..... ...|.++++.
T Consensus 415 svid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~ 476 (567)
T 1qks_A 415 ALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIK 476 (567)
T ss_dssp EEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGG
T ss_pred EEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECC
Confidence 55554431 01111222244678999998887653 4588998874
No 201
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.55 E-value=1.4e-11 Score=99.05 Aligned_cols=228 Identities=8% Similarity=-0.030 Sum_probs=144.8
Q ss_pred eeEeeEeccCCccee-eeeecc---ccccccceeeec--CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCcee-Ee
Q psy11524 46 TVINYPISPYISVLH-SYAASH---SWPQALSLCRTL--NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKAT-KW 118 (323)
Q Consensus 46 ~v~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~-~~ 118 (323)
...++.++|+|.... .-...+ .|+........+ .+...+.+++++++|+.+++. . ++.|..|+..+... .+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~-~-~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTD-F-NNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEE-T-TTEEEEECTTCSCCEEC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEc-C-CCEEEEEeCCCceEeee
Confidence 455778888875222 101111 133222222222 234578899999999855543 3 45899999877632 23
Q ss_pred e-ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeE-eecCCCceeEEEEecCCCEEEEEeC-CeEEEEeCC
Q psy11524 119 Q-AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYS-SLTHDHPISSLAWAPGGDMFAVGSY-NTLRLCDKV 195 (323)
Q Consensus 119 ~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d~~ 195 (323)
. .....+.++++.|+|+++++...++.|. +|+........ .......+.+++++|+|+++++... +.|.+||..
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~---~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~ 179 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVV---KLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAE 179 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEE---EECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTT
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEE---EEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecC
Confidence 2 2235789999999999887777788898 99865332222 2222346788999999986665555 499999988
Q ss_pred CCeeeec-CCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeC
Q psy11524 196 GWSHSLD-KPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDK 273 (323)
Q Consensus 196 ~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~ 273 (323)
+...... ......+..++++++|..+++...++ |.+||......... ...+...+.+++++|+| ..+..-..
T Consensus 180 ~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~--~~~~~~~p~~i~~~~~g----~l~v~~~~ 253 (270)
T 1rwi_B 180 SNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVL--PFTGLNTPLAVAVDSDR----TVYVADRG 253 (270)
T ss_dssp TCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEEC--CCCSCSCEEEEEECTTC----CEEEEEGG
T ss_pred CCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceee--ccCCCCCceeEEECCCC----CEEEEECC
Confidence 6544332 22336789999999997666666677 99999866544332 22333568899999997 53333345
Q ss_pred CCCeEEEeccc
Q psy11524 274 NRDLYLSMWSH 284 (323)
Q Consensus 274 ~~~~~~~~~~~ 284 (323)
++.+.+++...
T Consensus 254 ~~~v~~~~~~~ 264 (270)
T 1rwi_B 254 NDRVVKLTSLE 264 (270)
T ss_dssp GTEEEEECCCG
T ss_pred CCEEEEEcCCC
Confidence 66777777655
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.54 E-value=2.8e-12 Score=118.01 Aligned_cols=219 Identities=9% Similarity=0.030 Sum_probs=138.8
Q ss_pred cCCCCeEEEEeeCC----eEEEEeCCC---C-ceeEe-------eccCCCeEEEEECCCCCEEEEEcCC-C----ceEee
Q psy11524 90 SPDSNKVLLTQAKS----LVIKPLSPN---N-KATKW-------QAHDGLILKVAWCSSTDLILSGGED-C----KYKAS 149 (323)
Q Consensus 90 sp~~~~l~~~~~~~----~~v~~~~~~---~-~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~d-~----~i~~i 149 (323)
+|+|+++++...+. ..++..+.. + ....+ ..+...+..++|||||++||.+..+ | .|+
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~-- 192 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVK-- 192 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEE--
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEE--
Confidence 39999999887544 345665543 2 23332 1222367899999999999887654 3 466
Q ss_pred eEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeCC---------------eEEEEeCCCCe---eeecC--CCCccE
Q psy11524 150 FVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN---------------TLRLCDKVGWS---HSLDK--PDTGSV 209 (323)
Q Consensus 150 ~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~---------------~i~i~d~~~~~---~~~~~--~~~~~v 209 (323)
+||+++............+..++|+|| +.|+.++.+ .|++|++.+.. ..... .+...+
T Consensus 193 -v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~ 270 (741)
T 1yr2_A 193 -FVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRG 270 (741)
T ss_dssp -EEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCE
T ss_pred -EEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEE
Confidence 999975554443222223467899999 988888763 38899986432 22222 233458
Q ss_pred EEEEEcCCCCEEEEEec-----Cc-EEEEEcCCC--ceeeeecCCCCccceEEEEEccCCCCccceEEEEeCC----CCe
Q psy11524 210 YDLVWSNDATQIAGACA-----NV-IHIFDISSS--SSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKN----RDL 277 (323)
Q Consensus 210 ~~~~~~~~~~~l~~~~~-----d~-i~iwd~~~~--~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~----~~~ 277 (323)
..+.|+|||++|+..+. .. |++||+.++ +.... +..+........ +|+| +.+.+.... ..+
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~--l~~~~~~~~~~~-~~dg----~~l~~~s~~~~~~~~l 343 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTA--LIPDLKAQWDFV-DGVG----DQLWFVSGDGAPLKKI 343 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEE--EECSSSSCEEEE-EEET----TEEEEEECTTCTTCEE
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEE--ecCCCCceEEEE-eccC----CEEEEEECCCCCCCEE
Confidence 89999999998887763 34 999999877 41233 233333444443 4787 556555432 236
Q ss_pred EEEeccc--c----cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 278 YLSMWSH--S----LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 278 ~~~~~~~--~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
.++++.. . +...+...+..++|+ ++.++++...|+..++|.+
T Consensus 344 ~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 344 VRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp EEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred EEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 6666543 1 223334557778887 6678889999999888865
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.52 E-value=8.4e-12 Score=106.45 Aligned_cols=225 Identities=9% Similarity=-0.040 Sum_probs=142.3
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCCC--ceEeeeEEeCCCCe
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGEDC--KYKASFVWDTDGRQ 158 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~i~v~d~~~~~ 158 (323)
.....++|+|+|+.++ +...++.|+.|+..+. +..+........ ++|+|+++.|+++..++ .|. +++..+..
T Consensus 131 ~~P~~la~d~~g~lyv-~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~---~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLA-YQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVY---VYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTTEEEE-EETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEE---EEEGGGTT
T ss_pred CCceEEEEeCCCCEEE-EecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEE---EEEcCCCc
Confidence 4688999999998554 4444468999998765 444433333334 99999999998888766 566 88875332
Q ss_pred -eeEe---ec-CCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeeeec-----CCCCccE-E-EEEEcCC-CCEEEEE
Q psy11524 159 -LYSS---LT-HDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHSLD-----KPDTGSV-Y-DLVWSND-ATQIAGA 224 (323)
Q Consensus 159 -~~~~---~~-~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~~~-----~~~~~~v-~-~~~~~~~-~~~l~~~ 224 (323)
...+ .. ....+.+++++|++..|+++..+ .|+.||..+...... .+....- . .++|+|+ +.++++-
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 2233 12 44567899999954455555554 899999875543332 2222222 3 9999995 5444444
Q ss_pred ecCc-EEEEEcCCCceeeeecCCCC---------------ccceEEEEEccCCCCccceEEEEeC--CCCeEEEecccc-
Q psy11524 225 CANV-IHIFDISSSSSSNVTAPLSH---------------SHEITQLAVNQTGSLQERHVAFIDK--NRDLYLSMWSHS- 285 (323)
Q Consensus 225 ~~d~-i~iwd~~~~~~~~~~~~~~~---------------~~~v~~~~~~p~g~~~d~~l~~~~~--~~~~~~~~~~~~- 285 (323)
..++ |+.|+.... .. . +.++ -.....++++|+|. |.+.+. +..+..++...+
T Consensus 286 ~~~~~I~~~~~~g~-~~-~--~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~-----lyvad~~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 286 QNLSSVYKITPDGE-CE-W--FCGSATQKTVQDGLREEALFAQPNGMTVDEDGN-----FYIVDGFKGYCLRKLDILDGY 356 (409)
T ss_dssp TTTTEEEEECTTCC-EE-E--EEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC-----EEEEETTTTCEEEEEETTTTE
T ss_pred CCCCEEEEEecCCC-EE-E--EEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC-----EEEEeCCCCCEEEEEECCCCE
Confidence 5566 999996543 22 1 1111 13478899999983 444443 233444442221
Q ss_pred --cCCC---------------CccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 286 --LDKP---------------DTGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 286 --~~~~---------------~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
...+ .-.....++++|+|.++++-..+++|+.+.+
T Consensus 357 v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 357 VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 0000 0135789999999988888888999988876
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.51 E-value=4.1e-11 Score=97.81 Aligned_cols=189 Identities=8% Similarity=-0.027 Sum_probs=126.7
Q ss_pred eecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeecc-----CCCeEEEEECCCCCEEEEEcCC------
Q psy11524 76 RTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQAH-----DGLILKVAWCSSTDLILSGGED------ 143 (323)
Q Consensus 76 ~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~d------ 143 (323)
..+.....+.+++++|+|++++ +. .. .|..|+..+. ...+... ...+..++++|+|+++++....
T Consensus 48 ~~~~~~~~~~~i~~~~dG~l~v-~~-~~-~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~ 124 (297)
T 3g4e_A 48 QRVTMDAPVSSVALRQSGGYVA-TI-GT-KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAV 124 (297)
T ss_dssp EEEECSSCEEEEEEBTTSSEEE-EE-TT-EEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTB
T ss_pred EEEeCCCceEEEEECCCCCEEE-EE-CC-eEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCccccccc
Confidence 3445667899999999999554 43 43 6778887654 3333221 2357899999999976654322
Q ss_pred ---CceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeC--CeEEEEeCC--CCee---e---ecCCCCccEE
Q psy11524 144 ---CKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSY--NTLRLCDKV--GWSH---S---LDKPDTGSVY 210 (323)
Q Consensus 144 ---~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~--~~i~i~d~~--~~~~---~---~~~~~~~~v~ 210 (323)
.... |+.++.+++.. .+.........++|+|+++.++.+.. +.|..||+. +..+ . ........+.
T Consensus 125 ~~~~~~~-l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~ 202 (297)
T 3g4e_A 125 LERHQGA-LYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPD 202 (297)
T ss_dssp CCTTCEE-EEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEE
T ss_pred ccCCCcE-EEEEECCCCEE-EEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCC
Confidence 2223 22555554433 33334445789999999998776665 489999863 2221 1 1222345688
Q ss_pred EEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEc-cCCCCccceEEEEeCCC
Q psy11524 211 DLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVN-QTGSLQERHVAFIDKNR 275 (323)
Q Consensus 211 ~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~-p~g~~~d~~l~~~~~~~ 275 (323)
.++++++|++.++...++ |..||..+++.+.. +..+...+++++|. |++ +.|.+.+...
T Consensus 203 g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~--i~~p~~~~t~~~f~g~d~----~~L~vt~~~~ 263 (297)
T 3g4e_A 203 GMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQT--VKLPVDKTTSCCFGGKNY----SEMYVTCARD 263 (297)
T ss_dssp EEEEBTTSCEEEEEETTTEEEEECTTTCCEEEE--EECSSSBEEEEEEESGGG----CEEEEEEBCT
T ss_pred eeEECCCCCEEEEEcCCCEEEEEcCCCceEEEE--EECCCCCceEEEEeCCCC----CEEEEEcCCc
Confidence 999999998777777777 99999988998877 34445678999998 887 7777776543
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.51 E-value=4.9e-11 Score=97.93 Aligned_cols=193 Identities=9% Similarity=0.048 Sum_probs=130.7
Q ss_pred CCCCEEEEEEcCC-CCeEEEEeeCCeEEEEeCCCCceeEe-ec-----cCCCeEEEEECCCCCEEEEEcCC---------
Q psy11524 80 VSPPVYSAAWSPD-SNKVLLTQAKSLVIKPLSPNNKATKW-QA-----HDGLILKVAWCSSTDLILSGGED--------- 143 (323)
Q Consensus 80 ~~~~v~~~~~sp~-~~~l~~~~~~~~~v~~~~~~~~~~~~-~~-----~~~~v~~~~~~~~~~~l~~~~~d--------- 143 (323)
+...+.+++++++ |+.++ +...+ .|..|+..+....+ .. ....+.++++.|+|+++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v-~~~~~-~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFV-ADMRL-GLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEE-EETTT-EEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEE-EECCC-CEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 3467899999999 66444 44443 67778877444333 21 12357899999999887776654
Q ss_pred ------CceEeeeEEeCCCCeeeEeecCCCceeEEEEe----cCCCEEEEEeC-C-eEEEEeCC-CCe------eeecCC
Q psy11524 144 ------CKYKASFVWDTDGRQLYSSLTHDHPISSLAWA----PGGDMFAVGSY-N-TLRLCDKV-GWS------HSLDKP 204 (323)
Q Consensus 144 ------~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~----p~~~~l~~~~~-~-~i~i~d~~-~~~------~~~~~~ 204 (323)
+.|. .++.+++ ...+.........++|+ |+++.++++.. + .|.+||.. ... ......
T Consensus 147 ~~~~~~~~l~---~~~~~g~-~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 222 (314)
T 1pjx_A 147 SMQEKFGSIY---CFTTDGQ-MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPG 222 (314)
T ss_dssp TTSSSCEEEE---EECTTSC-EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCC
T ss_pred cccCCCCeEE---EECCCCC-EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCC
Confidence 4555 7877643 33333334456889999 99977666654 4 99999965 222 112223
Q ss_pred CC-ccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeC-CCCeEEEe
Q psy11524 205 DT-GSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDK-NRDLYLSM 281 (323)
Q Consensus 205 ~~-~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~-~~~~~~~~ 281 (323)
+. ..+..++++++|+++++...++ |.+||..+++.+.. +..+...+.+++|+|++ +.|.+.+. ++.+..++
T Consensus 223 ~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~--~~~~~~~~~~i~~~~dg----~~l~v~~~~~~~l~~~~ 296 (314)
T 1pjx_A 223 THEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMR--IRCPFEKPSNLHFKPQT----KTIFVTEHENNAVWKFE 296 (314)
T ss_dssp CSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEE--EECSSSCEEEEEECTTS----SEEEEEETTTTEEEEEE
T ss_pred CCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEE--EeCCCCCceeEEECCCC----CEEEEEeCCCCeEEEEe
Confidence 33 5688999999998887777778 99999887776665 33444678999999998 66766654 35666666
Q ss_pred ccc
Q psy11524 282 WSH 284 (323)
Q Consensus 282 ~~~ 284 (323)
...
T Consensus 297 ~~~ 299 (314)
T 1pjx_A 297 WQR 299 (314)
T ss_dssp CSS
T ss_pred CCC
Confidence 543
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.50 E-value=2.2e-12 Score=117.74 Aligned_cols=231 Identities=10% Similarity=0.035 Sum_probs=143.1
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCC----eEEEEeCCCCce-eEeeccCCCeEEEEECCCCCEEEEEcCCCc---------
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKS----LVIKPLSPNNKA-TKWQAHDGLILKVAWCSSTDLILSGGEDCK--------- 145 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~----~~v~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~--------- 145 (323)
+...+..++|||||++||++.+.. ..|+++|+.++. ............++|+ ||+.|+.++.+..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccC
Confidence 455788999999999999875432 479999987762 2221111113577999 9999988887743
Q ss_pred -eEeeeEEeCCCCe---eeEe--ec-CCCceeEEEEecCCCEEEEEeC----C-eEEEEeCCCC--eeeecCCCCccEEE
Q psy11524 146 -YKASFVWDTDGRQ---LYSS--LT-HDHPISSLAWAPGGDMFAVGSY----N-TLRLCDKVGW--SHSLDKPDTGSVYD 211 (323)
Q Consensus 146 -i~~i~v~d~~~~~---~~~~--~~-~~~~v~~~~~~p~~~~l~~~~~----~-~i~i~d~~~~--~~~~~~~~~~~v~~ 211 (323)
-..|++|++.... ...+ .. +.....++.|+|||++|+.... . .++++|+.+. ....+..+......
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~ 285 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVS 285 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEE
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEE
Confidence 1234499985322 2222 22 3345778999999998765432 3 7999998643 34444445555555
Q ss_pred EEEcCCCCEEEEEec-C---c-EEEEEcCCCce--eeeecCCCCccceEEEEEccCCCCccceEEEEe-CCC--CeEEEe
Q psy11524 212 LVWSNDATQIAGACA-N---V-IHIFDISSSSS--SNVTAPLSHSHEITQLAVNQTGSLQERHVAFID-KNR--DLYLSM 281 (323)
Q Consensus 212 ~~~~~~~~~l~~~~~-d---~-i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~-~~~--~~~~~~ 281 (323)
. |+++|..|+..+. + . |..+|+.++.. ... +..+...+. .|++++ +.|.+.. .++ .+.+++
T Consensus 286 ~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~--l~~~~~~~~--~~s~~g----~~lv~~~~~~g~~~l~~~d 356 (693)
T 3iuj_A 286 L-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRD--LIPERQQVL--TVHSGS----GYLFAEYMVDATARVEQFD 356 (693)
T ss_dssp E-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEE--EECCCSSCE--EEEEET----TEEEEEEEETTEEEEEEEC
T ss_pred E-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEE--EecCCCCEE--EEEEEC----CEEEEEEEECCeeEEEEEE
Confidence 4 6676666655443 2 4 89999987654 223 334444444 888888 4454433 333 355555
Q ss_pred cccc----cCCCCccceeEEEEeeCCCeeEeeecC----CeEEEEEe
Q psy11524 282 WSHS----LDKPDTGSVYDLVWSSDATQIAGACAN----GSLLLGTI 320 (323)
Q Consensus 282 ~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~d----g~i~~~~l 320 (323)
+... +.-...+.+..++++|+++.|+....+ +.++.|++
T Consensus 357 ~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 357 YEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp TTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred CCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 5432 111124567788888998877755544 77888775
No 207
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.50 E-value=1.9e-12 Score=108.38 Aligned_cols=170 Identities=9% Similarity=-0.009 Sum_probs=124.5
Q ss_pred CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc------------eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeee
Q psy11524 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK------------ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASF 150 (323)
Q Consensus 83 ~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~ 150 (323)
++..+++++....+++|+.+ .+.+|++... ......+.. |..++| |+++|+++ .++.|+
T Consensus 39 ~~nlLais~~~gll~a~~~~--~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~--- 109 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS--KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALY--- 109 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT--EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEE---
T ss_pred cccEEEEcCCCCEEEEeCCC--EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEE---
Confidence 68999999999999988776 3445753211 112334666 999999 89999998 889999
Q ss_pred EEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeC-CeEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc
Q psy11524 151 VWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-NTLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV 228 (323)
Q Consensus 151 v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 228 (323)
+||+. -........+..++.++.+.+.. +++++. +.+.+||+....... +...|++++|||+| ++.+..|+
T Consensus 110 v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg 182 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDR 182 (388)
T ss_dssp EEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTS
T ss_pred EEEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCC
Confidence 99985 33344455667778888776543 777777 499999998543332 44689999999999 67899999
Q ss_pred -EEEEEcCCCce--eeeecC----C---CCccceEEEEEccCCCCccceEEEEe
Q psy11524 229 -IHIFDISSSSS--SNVTAP----L---SHSHEITQLAVNQTGSLQERHVAFID 272 (323)
Q Consensus 229 -i~iwd~~~~~~--~~~~~~----~---~~~~~v~~~~~~p~g~~~d~~l~~~~ 272 (323)
+++|+...++. ..++.. . +|...|.++.|.+++ ..+.++.
T Consensus 183 ~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~----~flv~y~ 232 (388)
T 1xip_A 183 SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ----DFLAVFG 232 (388)
T ss_dssp CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS----EEEEEEE
T ss_pred cEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC----eEEEEEc
Confidence 99999887774 444200 1 367889999999987 5555554
No 208
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.48 E-value=6.1e-12 Score=101.46 Aligned_cols=176 Identities=11% Similarity=0.113 Sum_probs=128.4
Q ss_pred CCCEEEEEcCCCceEeeeEEeC-CCCeeeEeecCC-CceeEEEEecCCCEEEEEeCCeEEEEeCCCCeeeecCCC-CccE
Q psy11524 133 STDLILSGGEDCKYKASFVWDT-DGRQLYSSLTHD-HPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHSLDKPD-TGSV 209 (323)
Q Consensus 133 ~~~~l~~~~~d~~i~~i~v~d~-~~~~~~~~~~~~-~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~~~~~~~~~-~~~v 209 (323)
.++.|++++.++.|. +||. +++.+..+..+. ..+.+++++|+|++++ +..+.|+.||..++.+..+... ...+
T Consensus 4 ~~~~lv~~~~~~~v~---~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIA---IINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEE---EEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEE---EEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEcCCCCccc
Confidence 367899999999999 9999 788888887765 4789999999999888 3335899999976655544433 3468
Q ss_pred EEEEEcCCCCEEEEEec-Cc-EEEEEcCCCceeeeecCCC----CccceEEEEEccCCC-----CccceEEEEeCCCCeE
Q psy11524 210 YDLVWSNDATQIAGACA-NV-IHIFDISSSSSSNVTAPLS----HSHEITQLAVNQTGS-----LQERHVAFIDKNRDLY 278 (323)
Q Consensus 210 ~~~~~~~~~~~l~~~~~-d~-i~iwd~~~~~~~~~~~~~~----~~~~v~~~~~~p~g~-----~~d~~l~~~~~~~~~~ 278 (323)
.++.+.|+|+++++.+. ++ +..+|. +|+.+.++.+.. +......+++.++|. ..++.|..++.+ ...
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 89999999999999887 67 888885 677766532221 112344566777774 334566666666 345
Q ss_pred EEecccccCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 279 LSMWSHSLDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 279 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
+|.+.. ...+.++...++|+.++++..+++|..++.
T Consensus 158 ~w~~~~------~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~ 193 (276)
T 3no2_A 158 LNSVKL------SGTPFSSAFLDNGDCLVACGDAHCFVQLNL 193 (276)
T ss_dssp EEEEEC------SSCCCEEEECTTSCEEEECBTTSEEEEECT
T ss_pred EEEEEC------CCCccceeEcCCCCEEEEeCCCCeEEEEeC
Confidence 666654 345567788899999999888888876654
No 209
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=3.6e-10 Score=93.51 Aligned_cols=214 Identities=8% Similarity=-0.091 Sum_probs=135.3
Q ss_pred eEeeEeccCCcceeeeeecc----ccccccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeecc
Q psy11524 47 VINYPISPYISVLHSYAASH----SWPQALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQAH 121 (323)
Q Consensus 47 v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~ 121 (323)
.....|+|++..+......+ .|+........+.....+.+++|+|+|+.+++. .. .|+.|+..+. ...+...
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v~~--~~-gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLIAS--DD-GLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEEEE--TT-EEEEEETTTCCEEEEECS
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEEEE--CC-CEEEEECCCCcEEEEeeC
Confidence 34667888754433221111 133322223334456789999999999877654 33 4888887544 3333221
Q ss_pred -----CCCeEEEEECCCCCEEEEEcC------CCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeC-C-e
Q psy11524 122 -----DGLILKVAWCSSTDLILSGGE------DCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-N-T 188 (323)
Q Consensus 122 -----~~~v~~~~~~~~~~~l~~~~~------d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~-~ 188 (323)
...+.+++++|+|+++++... .+.|. .++ + .....+.........++|+|+++.++.+.. + .
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~---~~~-~-g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIY---HVA-K-GKVTKLFADISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEE---EEE-T-TEEEEEEEEESSEEEEEECTTSCEEEEEETTTCE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEE---EEe-C-CcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCE
Confidence 235889999999987665432 23444 666 4 344444333345778999999998776665 4 8
Q ss_pred EEEEeCC--CC-e------eeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEc
Q psy11524 189 LRLCDKV--GW-S------HSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVN 258 (323)
Q Consensus 189 i~i~d~~--~~-~------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 258 (323)
|.+||+. +. . ..........+..++++++|++.++...++ |..||. +++.+.. +......+.+++|+
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~--i~~~~~~~~~~af~ 279 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIAR--YEVPGKQTTCPAFI 279 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEE--EECSCSBEEEEEEE
T ss_pred EEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEE--EECCCCCcEEEEEe
Confidence 9999974 32 1 111222345678899999998777666667 999997 5666665 33444578999998
Q ss_pred -cCCCCccceEEEEeCCC
Q psy11524 259 -QTGSLQERHVAFIDKNR 275 (323)
Q Consensus 259 -p~g~~~d~~l~~~~~~~ 275 (323)
|++ +.|.+....+
T Consensus 280 g~d~----~~L~vt~~~~ 293 (326)
T 2ghs_A 280 GPDA----SRLLVTSARE 293 (326)
T ss_dssp STTS----CEEEEEEBCT
T ss_pred cCCC----CEEEEEecCC
Confidence 887 6776665544
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.44 E-value=4.7e-10 Score=94.36 Aligned_cols=238 Identities=11% Similarity=0.010 Sum_probs=142.0
Q ss_pred ccceeeecCCCCCEEEEEEcCCCCeEEEEee---------CCeEEEEeCCCCc--eeEeecc-------CCCeEEEEECC
Q psy11524 71 ALSLCRTLNVSPPVYSAAWSPDSNKVLLTQA---------KSLVIKPLSPNNK--ATKWQAH-------DGLILKVAWCS 132 (323)
Q Consensus 71 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---------~~~~v~~~~~~~~--~~~~~~~-------~~~v~~~~~~~ 132 (323)
+.++...+.....- .++++|||++++++.. .++.|.++|.... ...+... ......+.|+|
T Consensus 56 t~~~~~~i~~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp 134 (373)
T 2mad_H 56 SGSILGHVNGGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP 134 (373)
T ss_pred CCeEEEEecCCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC
Confidence 34444555433333 9999999999998863 2347888887653 2222211 12346899999
Q ss_pred CCCEEEEEcC--CCceEeeeEEeCCCCeeeEe-ecCCCceeEEEEecCCCE-EEEEeCC-eEEEEeCCCCeeeecC----
Q psy11524 133 STDLILSGGE--DCKYKASFVWDTDGRQLYSS-LTHDHPISSLAWAPGGDM-FAVGSYN-TLRLCDKVGWSHSLDK---- 203 (323)
Q Consensus 133 ~~~~l~~~~~--d~~i~~i~v~d~~~~~~~~~-~~~~~~v~~~~~~p~~~~-l~~~~~~-~i~i~d~~~~~~~~~~---- 203 (323)
||++|++++. ++.|. ++| ....+... ..... ++.+.|++.. +++.+.+ .+.++|..+.......
T Consensus 135 DG~~l~v~n~~~~~~v~---viD-~t~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~ 207 (373)
T 2mad_H 135 NNADLLFFQFAAGPAVG---LVV-QGGSSDDQLLSSPT---CYHIHPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAM 207 (373)
T ss_pred CCCEEEEEecCCCCeEE---EEE-CCCCEEeEEcCCCc---eEEEEeCCCceEEEEcCCCCEEEEECCCcEEEEEecccc
Confidence 9999998874 47788 999 75444332 22222 2455666543 4444444 8888998322221111
Q ss_pred -CCCcc-EEEEEEcCCCCEEEEEecCc-EEEEEcCCCce--eeeecCCC--------CccceEEEEEccCCCCccceEEE
Q psy11524 204 -PDTGS-VYDLVWSNDATQIAGACANV-IHIFDISSSSS--SNVTAPLS--------HSHEITQLAVNQTGSLQERHVAF 270 (323)
Q Consensus 204 -~~~~~-v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~--~~~~~~~~--------~~~~v~~~~~~p~g~~~d~~l~~ 270 (323)
....+ .....+.+++..++..+..+ +.+.|+..+.. +..+.+.. .......++++|++ +.+.+
T Consensus 208 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~----~~lyV 283 (373)
T 2mad_H 208 LTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSS----DGIYL 283 (373)
T ss_pred ccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCC----CEEEE
Confidence 11122 23456677666555555677 99999876532 22210100 11224447889988 66666
Q ss_pred EeC----------CCCeEEEecccc----cCCCCccceeEEEEeeCCC-eeEeee-cCCeEEEEEee
Q psy11524 271 IDK----------NRDLYLSMWSHS----LDKPDTGSVYDLVWSSDAT-QIAGAC-ANGSLLLGTII 321 (323)
Q Consensus 271 ~~~----------~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~-~l~s~~-~dg~i~~~~l~ 321 (323)
... .+.+.+.+..+. .... .....+++|+|||+ .|+++. .++.|.++|+.
T Consensus 284 ~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 284 LTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred EeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 543 234666666543 1122 34589999999999 777777 58999999874
No 211
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.43 E-value=1.4e-10 Score=96.03 Aligned_cols=202 Identities=11% Similarity=-0.005 Sum_probs=130.8
Q ss_pred cccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccC-----CCeEEEEECCCCCEEEEEc-
Q psy11524 70 QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHD-----GLILKVAWCSSTDLILSGG- 141 (323)
Q Consensus 70 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~-----~~v~~~~~~~~~~~l~~~~- 141 (323)
.+.++...+........++++|++ .++++...++.|.++|..+. ...+.... .....+++ .+++.+++..
T Consensus 72 ~t~~~~~~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~ 149 (328)
T 3dsm_A 72 NTFKEVGRITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWS 149 (328)
T ss_dssp TTCCEEEEEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECT
T ss_pred cccEEEEEcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCC
Confidence 445666666667889999999998 55555534468999998765 22333222 14556777 3444444433
Q ss_pred CCCceEeeeEEeCCC-CeeeEeecCCCceeEEEEecCCCEEEEEeC-----------CeEEEEeCCCCeee-ecC-CCCc
Q psy11524 142 EDCKYKASFVWDTDG-RQLYSSLTHDHPISSLAWAPGGDMFAVGSY-----------NTLRLCDKVGWSHS-LDK-PDTG 207 (323)
Q Consensus 142 ~d~~i~~i~v~d~~~-~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-----------~~i~i~d~~~~~~~-~~~-~~~~ 207 (323)
.++.|. ++|+.. +....+.. ......++++|+|++++++.. +.|.++|..+..+. ... +...
T Consensus 150 ~~~~v~---viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~ 225 (328)
T 3dsm_A 150 YQNRIL---KIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGD 225 (328)
T ss_dssp TCCEEE---EEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTC
T ss_pred CCCEEE---EEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCC
Confidence 488899 999974 44444443 345678999999987666543 37999998765443 222 2234
Q ss_pred cEEEEEEcCCCCEEEEEecCcEEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEe-----CCCCeEEEec
Q psy11524 208 SVYDLVWSNDATQIAGACANVIHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFID-----KNRDLYLSMW 282 (323)
Q Consensus 208 ~v~~~~~~~~~~~l~~~~~d~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~-----~~~~~~~~~~ 282 (323)
.+..++++|++++|+++.. .|.+||..+++......+.........++++|++ +.|.+.+ .++.+.+|+.
T Consensus 226 ~p~~la~~~d~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~----g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 226 WPSEVQLNGTRDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNN----GEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp CCEEEEECTTSCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTT----CCEEEEECTTSSSEEEEEEECT
T ss_pred CceeEEEecCCCEEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEEEcCCC----CeEEEEcccccccCCEEEEECC
Confidence 6899999999998888654 5999999888764321012224578899999965 4555554 2344555544
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.37 E-value=2.8e-10 Score=93.27 Aligned_cols=221 Identities=9% Similarity=-0.014 Sum_probs=136.4
Q ss_pred eecccceeEeeEeccCCcceeeeeec-c---ccccccceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCce
Q psy11524 40 IRRYDGTVINYPISPYISVLHSYAAS-H---SWPQALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKA 115 (323)
Q Consensus 40 ~~~~~~~v~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~ 115 (323)
+...........|+|+++.+...... + .|+.+.+......+...+..++++++|+.+++ ....+.|..++..+..
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~v~-~~~~~~v~~~~~~g~~ 118 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLVHC-EHGRRAITRSDADGQA 118 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEEEE-ETTTTEEEEECTTSCE
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEEEE-ECCCCEEEEECCCCCE
Confidence 33344455678888888633221111 1 13333322222235677899999999986554 3333478888876554
Q ss_pred eEeecc-----CCCeEEEEECCCCCEEEE----EcC-------------CCceEeeeEEeCCCCeeeEeecCCCceeEEE
Q psy11524 116 TKWQAH-----DGLILKVAWCSSTDLILS----GGE-------------DCKYKASFVWDTDGRQLYSSLTHDHPISSLA 173 (323)
Q Consensus 116 ~~~~~~-----~~~v~~~~~~~~~~~l~~----~~~-------------d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~ 173 (323)
..+..+ ...+.++++.|+|++.++ +.. .+.|. .+|.++..+..+. .......++
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~---~~d~~~g~~~~~~-~~~~p~gl~ 194 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVY---RLPPDGSPLQRMA-DLDHPNGLA 194 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEE---EECSSSCCCEEEE-EESSEEEEE
T ss_pred EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEE---EEcCCCCcEEEEe-cCCCCcceE
Confidence 443222 134678999999998876 332 23455 8887544444443 445678899
Q ss_pred EecCCCEEEEEeC-------CeEEEEeCCCCee----eecCCCCccEEEEEEcCCCCEEEEEecCcEEEEEcCCCceeee
Q psy11524 174 WAPGGDMFAVGSY-------NTLRLCDKVGWSH----SLDKPDTGSVYDLVWSNDATQIAGACANVIHIFDISSSSSSNV 242 (323)
Q Consensus 174 ~~p~~~~l~~~~~-------~~i~i~d~~~~~~----~~~~~~~~~v~~~~~~~~~~~l~~~~~d~i~iwd~~~~~~~~~ 242 (323)
|+||++.|+++.. +.|+.||+.+..+ .........+..++++++|++ .+++.++|.+|+. .++.+..
T Consensus 195 ~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~l-wv~~~~gv~~~~~-~g~~~~~ 272 (305)
T 3dr2_A 195 FSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWL-WSSSGTGVCVFDS-DGQLLGH 272 (305)
T ss_dssp ECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCE-EECCSSEEEEECT-TSCEEEE
T ss_pred EcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCE-EEecCCcEEEECC-CCCEEEE
Confidence 9999997776654 3799999764321 111112344667899999984 4444444999997 5666665
Q ss_pred ecCCCCccceEEEEEccCCCCccceEEEEeCC
Q psy11524 243 TAPLSHSHEITQLAVNQTGSLQERHVAFIDKN 274 (323)
Q Consensus 243 ~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~ 274 (323)
+ .... .+.+++|+|++ +.|.+...+
T Consensus 273 ~--~~~~-~~~~~~f~~d~----~~L~it~~~ 297 (305)
T 3dr2_A 273 I--PTPG-TASNCTFDQAQ----QRLFITGGP 297 (305)
T ss_dssp E--ECSS-CCCEEEECTTS----CEEEEEETT
T ss_pred E--ECCC-ceeEEEEeCCC----CEEEEEcCC
Confidence 3 2222 58889999887 677776654
No 213
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.35 E-value=5.6e-11 Score=99.47 Aligned_cols=163 Identities=10% Similarity=0.037 Sum_probs=116.0
Q ss_pred eeEeeEeccCCcceeeeeeccc--cc-cc-----------cceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCC
Q psy11524 46 TVINYPISPYISVLHSYAASHS--WP-QA-----------LSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSP 111 (323)
Q Consensus 46 ~v~~~~~~~~~~~~~~~~~~~~--~~-~~-----------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~ 111 (323)
+++.+++++....++....++. |+ .. .+......+.. |+.++| |+++|+++ .+ +.|++|+.
T Consensus 39 ~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~-~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TR-NALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ES-SEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cC-CcEEEEEc
Confidence 5778889988755443332221 22 01 11112234566 999999 99999988 55 69999997
Q ss_pred CCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeCC-e
Q psy11524 112 NNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-T 188 (323)
Q Consensus 112 ~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~ 188 (323)
... ......|...+.++.+.+. .++++..||.+. +||+....... +...|++++|||+| ++.|..| .
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~---v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~ 183 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLS---ALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRS 183 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEE---EEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSC
T ss_pred hhhhccCccceeecceeeEEecCC--CEEEEECCCCEE---EEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCc
Confidence 655 3446677888888888765 388899999999 99997444433 34579999999999 5566664 9
Q ss_pred EEEEeCCCCee---eec------C---CCCccEEEEEEcCCCCEEEE
Q psy11524 189 LRLCDKVGWSH---SLD------K---PDTGSVYDLVWSNDATQIAG 223 (323)
Q Consensus 189 i~i~d~~~~~~---~~~------~---~~~~~v~~~~~~~~~~~l~~ 223 (323)
+++|+..+... ..+ . +|...|.++.|.+++.++++
T Consensus 184 i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 184 FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999876653 223 1 36788999999999998886
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.35 E-value=5.2e-10 Score=95.38 Aligned_cols=217 Identities=9% Similarity=-0.037 Sum_probs=134.1
Q ss_pred eeEeeEeccCCcceeeeeecc---ccccc-cceeeecCCCCCEEEEEEcCCCCeEEEEeeCCe-EEEEeCCCCc--eeEe
Q psy11524 46 TVINYPISPYISVLHSYAASH---SWPQA-LSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSL-VIKPLSPNNK--ATKW 118 (323)
Q Consensus 46 ~v~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~-~v~~~~~~~~--~~~~ 118 (323)
....++++|++..+..-...+ .|+.. ..+........... ++|+|+++.|+++..+.. .|+.++..+. ...+
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~ 210 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRI 210 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEE
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEe
Confidence 456788888885222111001 13332 22222222233334 999999999888766443 7888887654 2233
Q ss_pred ----eccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEe----e-cCCCce-e-EEEEecCCCEEEEEeC-
Q psy11524 119 ----QAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSS----L-THDHPI-S-SLAWAPGGDMFAVGSY- 186 (323)
Q Consensus 119 ----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~----~-~~~~~v-~-~~~~~p~~~~l~~~~~- 186 (323)
......+.+++++|++..|+.+..++.|. .||.++.....+ . +....- . .++|+|++..|+.+..
T Consensus 211 g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~---~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 211 GQLGSTFSGKIGAVALDETEEWLYFVDSNKNFG---RFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EECCTTSCSCCCBCEECTTSSEEEEECTTCEEE---EEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred eeccchhcCCcEEEEEeCCCCeEEEEECCCcEE---EEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 21456678899999555555577788888 999975544443 1 111111 3 9999996555555555
Q ss_pred C-eEEEEeCCCCeeeecCCC---------------CccEEEEEEcCCCCEEEEEe-cCc-EEEEEcCCCceeeeecCCCC
Q psy11524 187 N-TLRLCDKVGWSHSLDKPD---------------TGSVYDLVWSNDATQIAGAC-ANV-IHIFDISSSSSSNVTAPLSH 248 (323)
Q Consensus 187 ~-~i~i~d~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~-~d~-i~iwd~~~~~~~~~~~~~~~ 248 (323)
+ .|+.|+..+...... ++ -.....++++|+|+++++-. .++ |+.||+.+++.... .++
T Consensus 288 ~~~I~~~~~~g~~~~~~-g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~~~---~g~ 363 (409)
T 3hrp_A 288 LSSVYKITPDGECEWFC-GSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVSTV---AGQ 363 (409)
T ss_dssp TTEEEEECTTCCEEEEE-ECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEEEE---EEC
T ss_pred CCEEEEEecCCCEEEEE-eCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEEEE---eCC
Confidence 4 999999876532221 11 13478999999999666666 667 99999877764432 221
Q ss_pred ---------------ccceEEEEEccCCCCccceEEEEeCCC
Q psy11524 249 ---------------SHEITQLAVNQTGSLQERHVAFIDKNR 275 (323)
Q Consensus 249 ---------------~~~v~~~~~~p~g~~~d~~l~~~~~~~ 275 (323)
-.....++++|++ .|.+.+..+
T Consensus 364 ~~~~g~~~g~~~~~~~~~P~giavd~~g-----~lyVad~~n 400 (409)
T 3hrp_A 364 VDVASQIDGTPLEATFNYPYDICYDGEG-----GYWIAEAWG 400 (409)
T ss_dssp TTCBSCCCBSTTTCCBSSEEEEEECSSS-----EEEEEESTT
T ss_pred CCCCCcCCCChhceEeCCceEEEEcCCC-----CEEEEECCC
Confidence 2357889999985 566666543
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.35 E-value=1.3e-10 Score=106.08 Aligned_cols=211 Identities=9% Similarity=0.013 Sum_probs=130.8
Q ss_pred cccceeEeeEeccCCcceeeeeec-cccccccceeeecC------CCCC--EEEEEEcCCCCeEEEEeeCC---------
Q psy11524 42 RYDGTVINYPISPYISVLHSYAAS-HSWPQALSLCRTLN------VSPP--VYSAAWSPDSNKVLLTQAKS--------- 103 (323)
Q Consensus 42 ~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~--v~~~~~sp~~~~l~~~~~~~--------- 103 (323)
++...+..+.|||||+.++..... |+...++.++..-. +... ...++|+ ||+.|+++..+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~ 204 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSAR 204 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCccccccccc
Confidence 455678889999999877654433 33222222221110 1112 2567899 999999987663
Q ss_pred ---eEEEEeCCCCce----eEe--ec-cCCCeEEEEECCCCCEEEEEcC-C---CceEeeeEEeCCCC--eeeEeecCCC
Q psy11524 104 ---LVIKPLSPNNKA----TKW--QA-HDGLILKVAWCSSTDLILSGGE-D---CKYKASFVWDTDGR--QLYSSLTHDH 167 (323)
Q Consensus 104 ---~~v~~~~~~~~~----~~~--~~-~~~~v~~~~~~~~~~~l~~~~~-d---~~i~~i~v~d~~~~--~~~~~~~~~~ 167 (323)
..|++|++.+.. ..+ .. |......+.|+|||++|+.... + ..+. ++|+++. ....+..+..
T Consensus 205 ~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~---~~d~~~~~~~~~~l~~~~~ 281 (693)
T 3iuj_A 205 TDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLY---VKDLSQENAPLLTVQGDLD 281 (693)
T ss_dssp CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEE---EEETTSTTCCCEEEECSSS
T ss_pred CCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEE---EEECCCCCCceEEEeCCCC
Confidence 258888876541 222 22 3445788999999998765443 2 3455 9998643 5566666665
Q ss_pred ceeEEEEecCCCEEEEEeC----C-eEEEEeCCCCee---eecCCCCccEEEEEEcCCCCEEEEEec-Cc---EEEEEcC
Q psy11524 168 PISSLAWAPGGDMFAVGSY----N-TLRLCDKVGWSH---SLDKPDTGSVYDLVWSNDATQIAGACA-NV---IHIFDIS 235 (323)
Q Consensus 168 ~v~~~~~~p~~~~l~~~~~----~-~i~i~d~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~---i~iwd~~ 235 (323)
..... |+++|..|+..+. . .|..+|+.+... ..+..+...+. .|++++++|+.... ++ |++||+.
T Consensus 282 ~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 282 ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 55555 6777776665553 2 688999875432 33444555554 89999988776654 43 8899987
Q ss_pred CCceeeeecCCCCccceEEEEEccCC
Q psy11524 236 SSSSSNVTAPLSHSHEITQLAVNQTG 261 (323)
Q Consensus 236 ~~~~~~~~~~~~~~~~v~~~~~~p~g 261 (323)
.+. ...+ .......+..+.++|++
T Consensus 359 g~~-~~~l-~~p~~~~~~~~~~~~d~ 382 (693)
T 3iuj_A 359 GKR-VREV-ALPGLGSVSGFNGKHDD 382 (693)
T ss_dssp SCE-EEEE-CCSSSSEEEECCCCTTC
T ss_pred CCe-eEEe-ecCCCceEEeeecCCCC
Confidence 544 3332 22344567777788887
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.32 E-value=2.1e-09 Score=89.69 Aligned_cols=238 Identities=10% Similarity=0.009 Sum_probs=136.6
Q ss_pred ccceeeecCCCCCEEEEEEcCCCCeEEEEee---------CCeEEEEeCCCCc--eeEeecc-------CCCeEEEEECC
Q psy11524 71 ALSLCRTLNVSPPVYSAAWSPDSNKVLLTQA---------KSLVIKPLSPNNK--ATKWQAH-------DGLILKVAWCS 132 (323)
Q Consensus 71 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---------~~~~v~~~~~~~~--~~~~~~~-------~~~v~~~~~~~ 132 (323)
+.++...+....... ++++|||++++++.. ..+.|.+||..+. ...+.-. ......++|+|
T Consensus 68 t~~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp 146 (386)
T 3sjl_D 68 AGRVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP 146 (386)
T ss_dssp TTEEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT
T ss_pred CCeEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC
Confidence 344455554333234 999999999988762 2357999998776 3333221 12456789999
Q ss_pred CCCEEEEEcC--CCceEeeeEEeCCC-CeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCC-Cee-e----ec
Q psy11524 133 STDLILSGGE--DCKYKASFVWDTDG-RQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVG-WSH-S----LD 202 (323)
Q Consensus 133 ~~~~l~~~~~--d~~i~~i~v~d~~~-~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~-~~~-~----~~ 202 (323)
||++++++.. ++.|. ++|+.. +.+..+.. .+ . ...+....+.+++.+.| .+.+.++.. ..+ . .+
T Consensus 147 DGk~lyVan~~~~~~Vs---VID~~t~~vv~tI~v-~g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~ 220 (386)
T 3sjl_D 147 DGKTLLFYQFSPAPAVG---VVDLEGKAFKRMLDV-PD-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVF 220 (386)
T ss_dssp TSSEEEEEECSSSCEEE---EEETTTTEEEEEEEC-CS-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCC
T ss_pred CCCEEEEEEcCCCCeEE---EEECCCCcEEEEEEC-CC-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeeccee
Confidence 9999888864 68899 999964 44445532 22 1 12232234455555553 666667643 221 1 11
Q ss_pred CCCCccEE-EEEEc-CCCCEEEEEecCc-EEEEEcCCCce--eeeecCCC--------CccceEEEEEccCCCCccceEE
Q psy11524 203 KPDTGSVY-DLVWS-NDATQIAGACANV-IHIFDISSSSS--SNVTAPLS--------HSHEITQLAVNQTGSLQERHVA 269 (323)
Q Consensus 203 ~~~~~~v~-~~~~~-~~~~~l~~~~~d~-i~iwd~~~~~~--~~~~~~~~--------~~~~v~~~~~~p~g~~~d~~l~ 269 (323)
.....++. ...|. ++|++++ .+.++ +++.|..++.. ...+.+.. .......++++|++ +.+.
T Consensus 221 ~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~----~~ly 295 (386)
T 3sjl_D 221 HPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRAL----DRIY 295 (386)
T ss_dssp SCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTT----TEEE
T ss_pred ccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCC----CeEE
Confidence 11112222 24664 6886554 55678 99999876542 22211000 11233346778887 5555
Q ss_pred EEeCC----------CCeEEEecccc----cCCCCccceeEEEEeeCCC-eeEee-ecCCeEEEEEee
Q psy11524 270 FIDKN----------RDLYLSMWSHS----LDKPDTGSVYDLVWSSDAT-QIAGA-CANGSLLLGTII 321 (323)
Q Consensus 270 ~~~~~----------~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~-~l~s~-~~dg~i~~~~l~ 321 (323)
+...+ +.+.+.+..+. .... +..+++++++||++ +|++. ..++.|.++|..
T Consensus 296 V~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 296 LLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAE 362 (386)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETT
T ss_pred EEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECC
Confidence 54321 22444444432 0111 45788999999997 66664 458999999863
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.31 E-value=2.9e-10 Score=94.87 Aligned_cols=224 Identities=11% Similarity=0.100 Sum_probs=139.0
Q ss_pred eeEeccCCcceeeeee----------c---cccc-cccceeeecCC--------CCCEEEEEEcCCCCeEEEEeeC-CeE
Q psy11524 49 NYPISPYISVLHSYAA----------S---HSWP-QALSLCRTLNV--------SPPVYSAAWSPDSNKVLLTQAK-SLV 105 (323)
Q Consensus 49 ~~~~~~~~~~~~~~~~----------~---~~~~-~~~~~~~~~~~--------~~~v~~~~~sp~~~~l~~~~~~-~~~ 105 (323)
.+.++|||+.++.... + ..|| .+.+....+.- ......++|+|||++++++... .+.
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~ 161 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPA 161 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCe
Confidence 4899999987764431 1 1244 34444444421 2356679999999999988653 468
Q ss_pred EEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC--CCeeeEeec----CCCcee-EEEEe-
Q psy11524 106 IKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD--GRQLYSSLT----HDHPIS-SLAWA- 175 (323)
Q Consensus 106 v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~--~~~~~~~~~----~~~~v~-~~~~~- 175 (323)
|.++|.... ..++.. .+ . ...+....+.+++.+.||++. +.++. ++....... ...++. ...|.
T Consensus 162 VsVID~~t~~vv~tI~v-~g-~-~~~~P~g~~~~~~~~~DG~~~---~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~ 235 (386)
T 3sjl_D 162 VGVVDLEGKAFKRMLDV-PD-C-YHIFPTAPDTFFMHCRDGSLA---KVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQ 235 (386)
T ss_dssp EEEEETTTTEEEEEEEC-CS-E-EEEEEEETTEEEEEETTSCEE---EEECCSSSCCEEEECCCCSCTTSCBCSCCEEET
T ss_pred EEEEECCCCcEEEEEEC-CC-c-ceeecCCCceeEEECCCCCEE---EEECCCCCeEEEeecceeccccccccccceeEc
Confidence 999998876 334422 11 1 222333445677778888888 88874 232211111 112222 24665
Q ss_pred cCCCEEEEEeCCeEEEEeCCCCeeeecCCC-------------CccEEEEEEcCCCCEEEEEec----------Cc-EEE
Q psy11524 176 PGGDMFAVGSYNTLRLCDKVGWSHSLDKPD-------------TGSVYDLVWSNDATQIAGACA----------NV-IHI 231 (323)
Q Consensus 176 p~~~~l~~~~~~~i~i~d~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~~----------d~-i~i 231 (323)
++|++++....+++++.|..+......... .+....++++|+++.++.... .+ |.+
T Consensus 236 ~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~v 315 (386)
T 3sjl_D 236 KAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVV 315 (386)
T ss_dssp TTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEE
T ss_pred CCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEE
Confidence 677655544446999999876533222111 223345788999998887653 24 999
Q ss_pred EEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeC-CCCeEEEeccc
Q psy11524 232 FDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDK-NRDLYLSMWSH 284 (323)
Q Consensus 232 wd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~-~~~~~~~~~~~ 284 (323)
+|..+++.+..+ . -...+..++++|+++ ..+.+.+. ++.+.+++..+
T Consensus 316 iD~~t~kv~~~i--~-vg~~~~~lavs~D~~---~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 316 LDAKTGERLAKF--E-MGHEIDSINVSQDEK---PLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp EETTTCCEEEEE--E-EEEEECEEEECSSSS---CEEEEEETTTTEEEEEETTT
T ss_pred EECCCCeEEEEE--E-CCCCcceEEECCCCC---eEEEEEcCCCCeEEEEECCC
Confidence 999999999874 2 234788999999982 25666554 66788888766
No 218
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.29 E-value=8.4e-10 Score=93.65 Aligned_cols=239 Identities=9% Similarity=-0.018 Sum_probs=142.7
Q ss_pred cccceeeecCCCCCEEEEEEcCCCCeEEEEee---------CCeEEEEeCCCCc--eeEeecc-------CCCeEEEEEC
Q psy11524 70 QALSLCRTLNVSPPVYSAAWSPDSNKVLLTQA---------KSLVIKPLSPNNK--ATKWQAH-------DGLILKVAWC 131 (323)
Q Consensus 70 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---------~~~~v~~~~~~~~--~~~~~~~-------~~~v~~~~~~ 131 (323)
.+.++...+.-...- .++++|||++++++.. ..+.|.++|.... ...+.-. ......+.|+
T Consensus 107 ~t~~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~s 185 (426)
T 3c75_H 107 STGRILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALT 185 (426)
T ss_dssp TTTEEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEEC
T ss_pred CCCEEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEc
Confidence 344455555433333 8999999999998863 3458999998765 3333211 1234578999
Q ss_pred CCCCEEEEEcC--CCceEeeeEEeCCC-CeeeEeecCCCceeEEEEecCC-CEEEEEeC-CeEEEEeCCCCeee-----e
Q psy11524 132 SSTDLILSGGE--DCKYKASFVWDTDG-RQLYSSLTHDHPISSLAWAPGG-DMFAVGSY-NTLRLCDKVGWSHS-----L 201 (323)
Q Consensus 132 ~~~~~l~~~~~--d~~i~~i~v~d~~~-~~~~~~~~~~~~v~~~~~~p~~-~~l~~~~~-~~i~i~d~~~~~~~-----~ 201 (323)
|||++++++.. ++.|. +.|+.. +.+..+... +. ....|++ +.+++.+. +.+.+.+....... .
T Consensus 186 pDGk~lyV~n~~~~~~Vs---VID~~t~kvv~~I~v~-g~---~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~ 258 (426)
T 3c75_H 186 PDNKNLLFYQFSPAPAVG---VVDLEGKTFDRMLDVP-DC---YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEV 258 (426)
T ss_dssp TTSSEEEEEECSSSCEEE---EEETTTTEEEEEEECC-SE---EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCC
T ss_pred CCCCEEEEEecCCCCeEE---EEECCCCeEEEEEEcC-Cc---eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeee
Confidence 99999998874 57899 999964 444454432 11 2233332 33333444 35555565322221 1
Q ss_pred cCCCCcc-EEEEEEcCCCCEEEEEecCc-EEEEEcCCCceee--eecCCC--------CccceEEEEEccCCCCccceEE
Q psy11524 202 DKPDTGS-VYDLVWSNDATQIAGACANV-IHIFDISSSSSSN--VTAPLS--------HSHEITQLAVNQTGSLQERHVA 269 (323)
Q Consensus 202 ~~~~~~~-v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~--~~~~~~--------~~~~v~~~~~~p~g~~~d~~l~ 269 (323)
+.....+ ...+.+.+++..++..+..+ +.+.|...+.... .+.+.. .......++++|++ +.+.
T Consensus 259 ~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg----~rly 334 (426)
T 3c75_H 259 FHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQS----DRIY 334 (426)
T ss_dssp CSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGG----TEEE
T ss_pred eccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCC----CEEE
Confidence 1111112 12457899988888878888 9999987654221 100110 01112236889998 6666
Q ss_pred EEeC----------CCCeEEEecccc----cCCCCccceeEEEEeeCCC-eeEeee-cCCeEEEEEee
Q psy11524 270 FIDK----------NRDLYLSMWSHS----LDKPDTGSVYDLVWSSDAT-QIAGAC-ANGSLLLGTII 321 (323)
Q Consensus 270 ~~~~----------~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~-~l~s~~-~dg~i~~~~l~ 321 (323)
+.+. .+.+.+.+..+. .... +....+++|+|||+ +|++.. .++.|.++|+.
T Consensus 335 Va~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~ 401 (426)
T 3c75_H 335 LLVDQRDEWKHKAASRFVVVLNAETGERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAA 401 (426)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETT
T ss_pred EEecccccccccCCCCEEEEEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECC
Confidence 6543 124556665543 1111 34588999999999 888887 59999999864
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.27 E-value=8.9e-09 Score=86.59 Aligned_cols=222 Identities=11% Similarity=0.047 Sum_probs=138.1
Q ss_pred eeEeccCCcceeeeee----------cc---ccc-cccceeeecCC--------CCCEEEEEEcCCCCeEEEEeeC-CeE
Q psy11524 49 NYPISPYISVLHSYAA----------SH---SWP-QALSLCRTLNV--------SPPVYSAAWSPDSNKVLLTQAK-SLV 105 (323)
Q Consensus 49 ~~~~~~~~~~~~~~~~----------~~---~~~-~~~~~~~~~~~--------~~~v~~~~~sp~~~~l~~~~~~-~~~ 105 (323)
.+.++|||+.++.... ++ .+| .+.+....+.- ......+.|+|||++|+++... ...
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 8999999987764421 11 123 23344333321 1345689999999999988753 457
Q ss_pred EEEeCCCCc--eeEeeccCCCeEEEEECCCC-CEEEEEcCCCceEeeeEEeCCCCeeeEee-----cCCCc-eeEEEEec
Q psy11524 106 IKPLSPNNK--ATKWQAHDGLILKVAWCSST-DLILSGGEDCKYKASFVWDTDGRQLYSSL-----THDHP-ISSLAWAP 176 (323)
Q Consensus 106 v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~i~v~d~~~~~~~~~~-----~~~~~-v~~~~~~p 176 (323)
|.++| .+. ...+....+ ++.+.|++ +.+++.+.||++. +++.+++...... ....+ .....+.+
T Consensus 150 v~viD-~t~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~dg~~~---~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~ 222 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPT---CYHIHPGAPSTFYLLCAQGGLA---KTDHAGGAAGAGLVGAMLTAAQNLLTQPAQAN 222 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCc---eEEEEeCCCceEEEEcCCCCEE---EEECCCcEEEEEeccccccCCcceeecceeEe
Confidence 88888 655 222022222 24455655 4566777899999 8988443332221 11122 23356677
Q ss_pred CCCEEEEEeC-CeEEEEeCCCCeeeecCC-------------CCccEEEEEEcCCCCEEEEEec----------Cc-EEE
Q psy11524 177 GGDMFAVGSY-NTLRLCDKVGWSHSLDKP-------------DTGSVYDLVWSNDATQIAGACA----------NV-IHI 231 (323)
Q Consensus 177 ~~~~l~~~~~-~~i~i~d~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~----------d~-i~i 231 (323)
++..++..+. +.+.+.|+.+........ .......+.++|+++.+++... .+ |.+
T Consensus 223 ~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~V 302 (373)
T 2mad_H 223 KSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTS 302 (373)
T ss_pred cCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEE
Confidence 6655444445 589999986432111100 1223445789999998877653 35 999
Q ss_pred EEcCCCceeeeecCCCCccceEEEEEccCCCCccc-eEEEEe-CCCCeEEEeccc
Q psy11524 232 FDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQER-HVAFID-KNRDLYLSMWSH 284 (323)
Q Consensus 232 wd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~-~l~~~~-~~~~~~~~~~~~ 284 (323)
+|..+++.+.++ . .......++|+||| + .+.+.+ .++.+.+++..+
T Consensus 303 ID~~t~~vv~~i--~-~g~~p~~i~~s~Dg----~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 303 VTGLVGQTSSQI--S-LGHDVDAISVAQDG----GPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred EECCCCEEEEEE--E-CCCCcCeEEECCCC----CeEEEEEcCCCCeEEEEECCC
Confidence 999999998874 2 23367899999998 6 677766 478888888876
No 220
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.25 E-value=3.5e-09 Score=88.19 Aligned_cols=223 Identities=10% Similarity=0.011 Sum_probs=130.6
Q ss_pred CCEEEEEEcCCCCeEEEEee-CCe--EEEEeCCCCceeEee-------ccCCCeEEEEECCCCCEEEEEcC-----CCce
Q psy11524 82 PPVYSAAWSPDSNKVLLTQA-KSL--VIKPLSPNNKATKWQ-------AHDGLILKVAWCSSTDLILSGGE-----DCKY 146 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~-~~~--~v~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~-----d~~i 146 (323)
..+..++++|+|+.+++... ..+ .|...+ .+.+..+. .+-..+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67889999999988776532 112 444444 33333221 24467899999999876665433 4678
Q ss_pred EeeeEEeCC-CCeeeEeecC------CCceeEEEEecCCCEE-EEEe---C-CeEEEEeCCCC-eeeecCCC--------
Q psy11524 147 KASFVWDTD-GRQLYSSLTH------DHPISSLAWAPGGDMF-AVGS---Y-NTLRLCDKVGW-SHSLDKPD-------- 205 (323)
Q Consensus 147 ~~i~v~d~~-~~~~~~~~~~------~~~v~~~~~~p~~~~l-~~~~---~-~~i~i~d~~~~-~~~~~~~~-------- 205 (323)
. +||+. ++.+..+... ...+..++++|++..+ ++.. . +.|.+||+.+. .......|
T Consensus 96 ~---~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~ 172 (343)
T 2qe8_A 96 V---AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDI 172 (343)
T ss_dssp E---EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSC
T ss_pred E---EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccc
Confidence 8 99996 4445554321 2356899999865454 4443 3 38999998643 33322221
Q ss_pred ---------------------CccEEEEEEcCCCCEEEEEecCc--EEEEEcC---CCc-----eeeeecCCCCccceEE
Q psy11524 206 ---------------------TGSVYDLVWSNDATQIAGACANV--IHIFDIS---SSS-----SSNVTAPLSHSHEITQ 254 (323)
Q Consensus 206 ---------------------~~~v~~~~~~~~~~~l~~~~~d~--i~iwd~~---~~~-----~~~~~~~~~~~~~v~~ 254 (323)
...+..++|+|+|+.|+.+...+ +..++.. .+. ....+...++......
T Consensus 173 ~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdg 252 (343)
T 2qe8_A 173 DLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDG 252 (343)
T ss_dssp CCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSC
T ss_pred ceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCce
Confidence 02368899999999888887665 6666532 111 0000001112234556
Q ss_pred EEEccCCC-----CccceEEEEeC-CCCeEEEecccccCCCCccceeEEEEeeCCCeeEeeecCC
Q psy11524 255 LAVNQTGS-----LQERHVAFIDK-NRDLYLSMWSHSLDKPDTGSVYDLVWSSDATQIAGACANG 313 (323)
Q Consensus 255 ~~~~p~g~-----~~d~~l~~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~dg 313 (323)
++++++|. ..++.|..|+. ++...... ...+...+.+++|.++|+++++.+..+
T Consensus 253 ia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~-----~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 253 ISIDKDHNIYVGDLAHSAIGVITSADRAYKLLV-----TDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp EEECTTCCEEEEEGGGTEEEEEETTTTEEEEEE-----ECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred EEECCCCCEEEEccCCCeEEEEECCCCCEEEEE-----ECCceecCCeeEECCCCcEEEEeCccc
Confidence 88888874 23344555554 33321110 000145688999999998777766443
No 221
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.22 E-value=1.4e-08 Score=85.52 Aligned_cols=215 Identities=9% Similarity=-0.023 Sum_probs=134.5
Q ss_pred EEc--CCCCeEEEEeeCCeEEEEeCCCCc------eeEee------c-cCCCeEEEEECCCCCEEEEEcCC------Cce
Q psy11524 88 AWS--PDSNKVLLTQAKSLVIKPLSPNNK------ATKWQ------A-HDGLILKVAWCSSTDLILSGGED------CKY 146 (323)
Q Consensus 88 ~~s--p~~~~l~~~~~~~~~v~~~~~~~~------~~~~~------~-~~~~v~~~~~~~~~~~l~~~~~d------~~i 146 (323)
.++ +++++|++.+.....|+++|.... ...+. . .......+..+|+| .++++..+ +.+
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 346 899999998887789999997532 22231 1 11245677889999 66666555 678
Q ss_pred EeeeEEeCC-CCeeeEeecCC---CceeEEEEecCCCEEEEEe-------------------C-CeEEEEeCCCCeee-e
Q psy11524 147 KASFVWDTD-GRQLYSSLTHD---HPISSLAWAPGGDMFAVGS-------------------Y-NTLRLCDKVGWSHS-L 201 (323)
Q Consensus 147 ~~i~v~d~~-~~~~~~~~~~~---~~v~~~~~~p~~~~l~~~~-------------------~-~~i~i~d~~~~~~~-~ 201 (323)
. ++|.+ .+.+..+.... .--..+.|+|+++.+++.. . ++|.+||+.+.++. .
T Consensus 167 ~---vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~t 243 (462)
T 2ece_A 167 L---MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHS 243 (462)
T ss_dssp E---EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEE
T ss_pred E---EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeE
Confidence 8 99986 56666665322 2244688999999888885 2 59999998865332 2
Q ss_pred cCC--CCccEEEEEE--cCCCCEEEEEec-----C-c-EEEEEcCCCceee--eecCCC----------------Cccce
Q psy11524 202 DKP--DTGSVYDLVW--SNDATQIAGACA-----N-V-IHIFDISSSSSSN--VTAPLS----------------HSHEI 252 (323)
Q Consensus 202 ~~~--~~~~v~~~~~--~~~~~~l~~~~~-----d-~-i~iwd~~~~~~~~--~~~~~~----------------~~~~v 252 (323)
+.. .......+.| +|+++++++++. . + |.+|....++... .+.+.. .....
T Consensus 244 I~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~p 323 (462)
T 2ece_A 244 LTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLV 323 (462)
T ss_dssp EESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCC
T ss_pred EecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCce
Confidence 221 2234566666 999999888876 4 4 7766554442111 100000 02346
Q ss_pred EEEEEccCCCCccceEEEEeC-CCCeEEEecccc--------cCCC-------C------ccceeEEEEeeCCCeeEeee
Q psy11524 253 TQLAVNQTGSLQERHVAFIDK-NRDLYLSMWSHS--------LDKP-------D------TGSVYDLVWSSDATQIAGAC 310 (323)
Q Consensus 253 ~~~~~~p~g~~~d~~l~~~~~-~~~~~~~~~~~~--------~~~~-------~------~~~v~~~~~s~~g~~l~s~~ 310 (323)
..+.+|||| +.|.+.+. .+.+.++++... +..+ | .+.-..++++|||++|+++.
T Consensus 324 a~I~lS~DG----rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 324 TDIDISLDD----KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCEEECTTS----CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred eEEEECCCC----CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 789999999 56655543 234555554311 0000 0 11358899999999999887
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.12 E-value=2.1e-08 Score=83.49 Aligned_cols=188 Identities=10% Similarity=0.008 Sum_probs=123.8
Q ss_pred CCeEEEEECCCCCEEEEEc--CCCceEeeeEEeCCCCeeeEee-------cCCCceeEEEEecCCCEEEEEeC------C
Q psy11524 123 GLILKVAWCSSTDLILSGG--EDCKYKASFVWDTDGRQLYSSL-------THDHPISSLAWAPGGDMFAVGSY------N 187 (323)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~--~d~~i~~i~v~d~~~~~~~~~~-------~~~~~v~~~~~~p~~~~l~~~~~------~ 187 (323)
..+..++++|+|+.+++.. .++.++ +|.++...+..+. .+...+..++++|+|+++++... .
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~---l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQ---VAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCS---EEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceE---EEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence 6788999999999888864 234345 5555333333221 23457899999999886665432 4
Q ss_pred eEEEEeCCCCe-eeecC------CCCccEEEEEEcCCCCEE-EEEe---cCc-EEEEEcCCCceeeeecCCCC-------
Q psy11524 188 TLRLCDKVGWS-HSLDK------PDTGSVYDLVWSNDATQI-AGAC---ANV-IHIFDISSSSSSNVTAPLSH------- 248 (323)
Q Consensus 188 ~i~i~d~~~~~-~~~~~------~~~~~v~~~~~~~~~~~l-~~~~---~d~-i~iwd~~~~~~~~~~~~~~~------- 248 (323)
.|.+||+.+.. ...+. .+...+..++++|++..+ ++.. .++ |.+||..+++.... +..|
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~--~~~~~~~~~~~ 171 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARV--LQGYPGIAPED 171 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEE--CTTCTTTSCCS
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEE--ecCCCcccccc
Confidence 89999987543 33221 122456899999865454 4444 456 99999988876554 2221
Q ss_pred ----------------------ccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-c-----------C--C--CC
Q psy11524 249 ----------------------SHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-L-----------D--K--PD 290 (323)
Q Consensus 249 ----------------------~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-~-----------~--~--~~ 290 (323)
...+..++|+|++ +.+.+.+..+. .+|.+... . . . .+
T Consensus 172 ~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg----~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 246 (343)
T 2qe8_A 172 IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN----EWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSE 246 (343)
T ss_dssp CCCEETTEECBEECTTSCEECCCCCEEEEEECTTS----CEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEE
T ss_pred cceeECCEEEEeccCCCceeceecccceeEeccCC----CEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEeccc
Confidence 0235789999998 78888887664 44444321 0 0 0 11
Q ss_pred ccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 291 TGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 291 ~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
......++++++|+++++...++.|.+|+.
T Consensus 247 ~g~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 247 KPICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp CCSCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred CCCCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 234568999999999999989999999985
No 223
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.12 E-value=2e-07 Score=74.59 Aligned_cols=173 Identities=6% Similarity=-0.108 Sum_probs=116.7
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeec-cCCCeEEEEECCCCCEEEEEcC---CCceEeeeEEeCCC
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQA-HDGLILKVAWCSSTDLILSGGE---DCKYKASFVWDTDG 156 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~-~~~~v~~~~~~~~~~~l~~~~~---d~~i~~i~v~d~~~ 156 (323)
.....++++|++..|+++....+.|..++..+. ...+.. .......++++|++..|+.+.. .+.|. .+++++
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~---~~~~dg 155 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIE---TSHMDG 155 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEE---EEETTS
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEE---EEecCC
Confidence 578999999988888877766668888887665 222322 2256789999997666555543 36777 888876
Q ss_pred CeeeEee-cCCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEec-Cc-EEE
Q psy11524 157 RQLYSSL-THDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACA-NV-IHI 231 (323)
Q Consensus 157 ~~~~~~~-~~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~-i~i 231 (323)
.....+. ........++++|++..|+.+.. . .|..+|..+...............++.. +..|+.+.. .+ |..
T Consensus 156 ~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~ 233 (267)
T 1npe_A 156 TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIA 233 (267)
T ss_dssp CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEE
T ss_pred CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEE
Confidence 5544443 23346789999998888777776 3 9999998865333222222345666654 455665554 45 999
Q ss_pred EEcCCCceeeeecCCCCc-cceEEEEEccCC
Q psy11524 232 FDISSSSSSNVTAPLSHS-HEITQLAVNQTG 261 (323)
Q Consensus 232 wd~~~~~~~~~~~~~~~~-~~v~~~~~~p~g 261 (323)
+|..+++.+.++ .... .....+++.|++
T Consensus 234 ~d~~~g~~~~~i--~~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 234 MDLAISKEMDTF--HPHKQTRLYGITIALSQ 262 (267)
T ss_dssp EETTTTEEEEEE--CCSSCCCCCCEEEECSC
T ss_pred EeCCCCCceEEE--ccccccccceeeecCcc
Confidence 999999888773 3222 246778888875
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.11 E-value=6e-09 Score=86.95 Aligned_cols=232 Identities=10% Similarity=-0.028 Sum_probs=136.7
Q ss_pred ccceeeecCC-CCCEEEEEEcCCCCeEEEEee---------CCeEEEEeCCCCc--eeEeecc-------CCCeEEEEEC
Q psy11524 71 ALSLCRTLNV-SPPVYSAAWSPDSNKVLLTQA---------KSLVIKPLSPNNK--ATKWQAH-------DGLILKVAWC 131 (323)
Q Consensus 71 ~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~---------~~~~v~~~~~~~~--~~~~~~~-------~~~v~~~~~~ 131 (323)
+.++...+.- ..+ .+.++|||++++++.. .++.|.++|.... ..++... ......++++
T Consensus 55 t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~S 132 (368)
T 1mda_H 55 CGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNC 132 (368)
T ss_dssp TTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEEC
T ss_pred CCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEc
Confidence 4455555542 334 7999999999998862 3468999998876 4444322 1235688999
Q ss_pred CCCCEEEEEcC--CCceEeeeE--EeCCCCeeeEeecCCCceeEEEEecCCCE-EEEEeCC-eEEEEeCCC-----Ceee
Q psy11524 132 SSTDLILSGGE--DCKYKASFV--WDTDGRQLYSSLTHDHPISSLAWAPGGDM-FAVGSYN-TLRLCDKVG-----WSHS 200 (323)
Q Consensus 132 ~~~~~l~~~~~--d~~i~~i~v--~d~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~~~~~~-~i~i~d~~~-----~~~~ 200 (323)
|||++++++.. +..+. + +|+.. +..+... +. ..+.|+++. +++.+.+ .+.+.|+.. ....
T Consensus 133 pDGk~lyVan~~~~~~v~---V~~iD~~t--v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~ 203 (368)
T 1mda_H 133 ASSACLLFFLFGSSAAAG---LSVPGASD--DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVG 203 (368)
T ss_dssp TTSSCEEEEECSSSCEEE---EEETTTEE--EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECC
T ss_pred CCCCEEEEEccCCCCeEE---EEEEchhh--ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEE
Confidence 99999998875 45687 8 88865 4444321 11 223455443 3333333 677778765 2221
Q ss_pred e-----cCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCc--eeeeecCCC-----C---ccceEEEEEccCCCCc
Q psy11524 201 L-----DKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSS--SSNVTAPLS-----H---SHEITQLAVNQTGSLQ 264 (323)
Q Consensus 201 ~-----~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~--~~~~~~~~~-----~---~~~v~~~~~~p~g~~~ 264 (323)
. ......+. . ++++..++..+. + +.+.|..++. .+..+.+.. + ......++++|++
T Consensus 204 ~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg--- 275 (368)
T 1mda_H 204 AQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT--- 275 (368)
T ss_dssp CCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTT---
T ss_pred EEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCC---
Confidence 1 11112233 3 666666666666 8 9999986543 222211111 0 1112226899998
Q ss_pred cceEEEEeC-C--------CCeEEEecccc--cCCCC-ccceeEEEEeeCCCe-eEeee-cCCeEEEEEeec
Q psy11524 265 ERHVAFIDK-N--------RDLYLSMWSHS--LDKPD-TGSVYDLVWSSDATQ-IAGAC-ANGSLLLGTIIQ 322 (323)
Q Consensus 265 d~~l~~~~~-~--------~~~~~~~~~~~--~~~~~-~~~v~~~~~s~~g~~-l~s~~-~dg~i~~~~l~~ 322 (323)
+.+.+... . +...+++..+. +.... +....+++|+|||+. +++.. .++.|.++|+..
T Consensus 276 -~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 276 -DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp -TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred -CEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 66665432 1 24557777654 11111 346899999999985 55666 599999999743
No 225
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.09 E-value=5.3e-07 Score=72.10 Aligned_cols=214 Identities=7% Similarity=-0.006 Sum_probs=127.4
Q ss_pred CCeEEEEeeCCeEEEEeCCCCcee-------EeeccCCCeEEEEECCCCCEEEEE-cCCCceEeeeEEeCCCCeeeEeec
Q psy11524 93 SNKVLLTQAKSLVIKPLSPNNKAT-------KWQAHDGLILKVAWCSSTDLILSG-GEDCKYKASFVWDTDGRQLYSSLT 164 (323)
Q Consensus 93 ~~~l~~~~~~~~~v~~~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~i~v~d~~~~~~~~~~~ 164 (323)
|++|+++.. +.|+.++..+... .+......+..++|++++..|+.+ ...+.|. ++++++.....+..
T Consensus 1 ~~~l~~~~~--~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~---~~~~~g~~~~~~~~ 75 (267)
T 1npe_A 1 GTHLLFAQT--GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIG---RASLHGGEPTTIIR 75 (267)
T ss_dssp CEEEEEEEE--EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEE---EEESSSCCCEEEEC
T ss_pred CcEEEEEcC--CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEE---EEecCCCCcEEEEE
Confidence 345666543 3677776655411 122223457799999976655544 4567888 99998665444432
Q ss_pred -CCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeeee-cCCCCccEEEEEEcCCCCEEEEEec---Cc-EEEEEcCC
Q psy11524 165 -HDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHSL-DKPDTGSVYDLVWSNDATQIAGACA---NV-IHIFDISS 236 (323)
Q Consensus 165 -~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~---d~-i~iwd~~~ 236 (323)
.......++++|++..++.+.. . .|.++++.+..... ..........++++|++..|+.+.. .+ |..+++..
T Consensus 76 ~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg 155 (267)
T 1npe_A 76 QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG 155 (267)
T ss_dssp TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS
T ss_pred CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC
Confidence 2356789999998777776666 4 99999987653332 2222256789999997666655554 35 88888754
Q ss_pred CceeeeecCCCCccceEEEEEccCCCCccceEEEEeCC-CCeEEEecccc----cCCCCccceeEEEEeeCCCeeE-eee
Q psy11524 237 SSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKN-RDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIA-GAC 310 (323)
Q Consensus 237 ~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~-~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~-s~~ 310 (323)
. ....+ ..........++++|++ +.|.+.+.. +.+..++.... +... ......++. ++..|+ +..
T Consensus 156 ~-~~~~~-~~~~~~~P~gia~d~~~----~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~--d~~~lyva~~ 226 (267)
T 1npe_A 156 T-NRRIL-AQDNLGLPNGLTFDAFS----SQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTS--YGKNLYYTDW 226 (267)
T ss_dssp C-CCEEE-ECTTCSCEEEEEEETTT----TEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEE--ETTEEEEEET
T ss_pred C-CcEEE-EECCCCCCcEEEEcCCC----CEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEE--eCCEEEEEEC
Confidence 3 22221 12233467889999987 566665543 34555554331 1111 223345655 344444 444
Q ss_pred cCCeEEEEEe
Q psy11524 311 ANGSLLLGTI 320 (323)
Q Consensus 311 ~dg~i~~~~l 320 (323)
.++.|..++.
T Consensus 227 ~~~~v~~~d~ 236 (267)
T 1npe_A 227 KTNSVIAMDL 236 (267)
T ss_dssp TTTEEEEEET
T ss_pred CCCeEEEEeC
Confidence 5678877764
No 226
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.09 E-value=5.2e-07 Score=73.71 Aligned_cols=226 Identities=14% Similarity=0.115 Sum_probs=127.2
Q ss_pred cceeeecCCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEeeccCCCeEEEEECCCCCEEEEEcCCC--ceEee
Q psy11524 72 LSLCRTLNVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVAWCSSTDLILSGGEDC--KYKAS 149 (323)
Q Consensus 72 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--~i~~i 149 (323)
.++...+........++|+|+|+.+ ++....+.|+.++..+...........+..+++.++|+++++..... .|.
T Consensus 22 ~~~~~~~p~~~~pegia~~~~g~ly-v~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~-- 98 (306)
T 2p4o_A 22 AKIITSFPVNTFLENLASAPDGTIF-VTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVV-- 98 (306)
T ss_dssp EEEEEEECTTCCEEEEEECTTSCEE-EEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEE--
T ss_pred ceEeEeCCCCCCcceEEECCCCCEE-EEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEE--
Confidence 4445555555778899999998844 44444568999998776444434456788999999999666553332 355
Q ss_pred eEEeCCCCeeeEeec--CCCceeEEEEecCCCEEEEEeC-CeEEEEeCCCC--eeee---------cCCCCccEEEEEEc
Q psy11524 150 FVWDTDGRQLYSSLT--HDHPISSLAWAPGGDMFAVGSY-NTLRLCDKVGW--SHSL---------DKPDTGSVYDLVWS 215 (323)
Q Consensus 150 ~v~d~~~~~~~~~~~--~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d~~~~--~~~~---------~~~~~~~v~~~~~~ 215 (323)
.++.....+..+.. .......++..+++..+++... +.|+.+|..+. .+.. ....-.....+ +
T Consensus 99 -~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s 175 (306)
T 2p4o_A 99 -SLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--K 175 (306)
T ss_dssp -EEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--E
T ss_pred -EEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--C
Confidence 66765443433322 1223345555555544444333 48999997643 2210 01111234555 8
Q ss_pred CCCCEEEEEec-Cc-EEEEEcCC-Cce--eeeecCCCCccceEEEEEccCCCCccceEEEEeC-CCCeEEEeccccc---
Q psy11524 216 NDATQIAGACA-NV-IHIFDISS-SSS--SNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDK-NRDLYLSMWSHSL--- 286 (323)
Q Consensus 216 ~~~~~l~~~~~-d~-i~iwd~~~-~~~--~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~-~~~~~~~~~~~~~--- 286 (323)
|++++|+.+.. .+ |..||+.. ++. ... +. .......++++++|. +.+.+. .+.+.+++.....
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~--~~-~~~~P~gi~vd~dG~-----l~va~~~~~~V~~~~~~G~~~~~ 247 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEI--FV-EQTNIDDFAFDVEGN-----LYGATHIYNSVVRIAPDRSTTII 247 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBCCCEE--EE-ESCCCSSEEEBTTCC-----EEEECBTTCCEEEECTTCCEEEE
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEE--Ee-ccCCCCCeEECCCCC-----EEEEeCCCCeEEEECCCCCEEEE
Confidence 88887776665 45 99999874 332 111 11 012345678888873 222222 2334444332110
Q ss_pred --CCCCccceeEEEEe---eCCCeeEeeec
Q psy11524 287 --DKPDTGSVYDLVWS---SDATQIAGACA 311 (323)
Q Consensus 287 --~~~~~~~v~~~~~s---~~g~~l~s~~~ 311 (323)
.........+++|. |+++.|+.++.
T Consensus 248 ~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 248 AQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp ECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred eecccccCCceEEEEecccCCCCEEEEECC
Confidence 01113568999999 89887775554
No 227
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=2.9e-08 Score=84.30 Aligned_cols=218 Identities=7% Similarity=-0.012 Sum_probs=127.6
Q ss_pred CCCCeEEEEeeCC----eEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEc----------CCCceEeeeEEeC
Q psy11524 91 PDSNKVLLTQAKS----LVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGG----------EDCKYKASFVWDT 154 (323)
Q Consensus 91 p~~~~l~~~~~~~----~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~----------~d~~i~~i~v~d~ 154 (323)
|++++++++.... +.|.++|..+. +..+.....+ .++++|||++++++. .++.|. ++|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~Vs---viD~ 156 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVE---VFDP 156 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEE---EECT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEE---EEEC
Confidence 6788888776643 68999998766 4455444444 899999999888876 366788 9999
Q ss_pred C-CCeeeEeecC-------CCceeEEEEecCCCEEEEEeC--C-eEEEEeCCCCeee-ecCCCCccEEEEEEcCCC-CEE
Q psy11524 155 D-GRQLYSSLTH-------DHPISSLAWAPGGDMFAVGSY--N-TLRLCDKVGWSHS-LDKPDTGSVYDLVWSNDA-TQI 221 (323)
Q Consensus 155 ~-~~~~~~~~~~-------~~~v~~~~~~p~~~~l~~~~~--~-~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~-~~l 221 (323)
. .+.+..+.-. ......++|+|||++++++.. + .|.+.|+.+..+. .+. -.+. ....|++ ..+
T Consensus 157 ~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~-v~g~---~~~~p~g~~~~ 232 (426)
T 3c75_H 157 VTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD-VPDC---YHIFPASPTVF 232 (426)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEE-CCSE---EEEEEEETTEE
T ss_pred CCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEE-cCCc---eeeccCCCcEE
Confidence 6 4555555421 234567899999999998874 3 8999999876443 222 1111 2233332 344
Q ss_pred EEEecCc-EEEEEcCCCceeeeec--CCCCccce-EEEEEccCCCCccceEEEEeCCCCeEEEecccc---------cCC
Q psy11524 222 AGACANV-IHIFDISSSSSSNVTA--PLSHSHEI-TQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS---------LDK 288 (323)
Q Consensus 222 ~~~~~d~-i~iwd~~~~~~~~~~~--~~~~~~~v-~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~---------~~~ 288 (323)
++.+.|+ +.+.+..+++...... +.....++ ..+.+.+++ +.+.+-...+.+.+.+.... +..
T Consensus 233 v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg----~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~ 308 (426)
T 3c75_H 233 YMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS----GRLVWPTYTGKIFQADLTAEGATFRAPIEALT 308 (426)
T ss_dssp EEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT----CEEEEEBTTSEEEEEEECSSCEEECCCEESSC
T ss_pred EEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC----CEEEEEeCCCcEEEEeccCCceEEeeeeeecc
Confidence 5555666 6666665554432100 11111111 234567776 44444444455555554221 000
Q ss_pred -------CCccceeEEEEeeCCCeeEeeec----------CCeEEEEEee
Q psy11524 289 -------PDTGSVYDLVWSSDATQIAGACA----------NGSLLLGTII 321 (323)
Q Consensus 289 -------~~~~~v~~~~~s~~g~~l~s~~~----------dg~i~~~~l~ 321 (323)
........++++|+++.|+.... ++.|.+.|+.
T Consensus 309 ~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~ 358 (426)
T 3c75_H 309 EAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE 358 (426)
T ss_dssp TTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred ccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC
Confidence 00122234789999987776543 3468877753
No 228
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.07 E-value=1.6e-09 Score=94.29 Aligned_cols=210 Identities=10% Similarity=0.028 Sum_probs=131.1
Q ss_pred CCCCeEEEEeeCCeEEEEeCCCCc--eeEee-ccCCCeEEEEE-C-CCCCEEEEEcC------------------CCceE
Q psy11524 91 PDSNKVLLTQAKSLVIKPLSPNNK--ATKWQ-AHDGLILKVAW-C-SSTDLILSGGE------------------DCKYK 147 (323)
Q Consensus 91 p~~~~l~~~~~~~~~v~~~~~~~~--~~~~~-~~~~~v~~~~~-~-~~~~~l~~~~~------------------d~~i~ 147 (323)
+||+++++...++..|.+.|+... ...+. .....+..+++ + |++++++++++ ++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 389999988777778988888774 22122 12345788888 5 99999988852 34566
Q ss_pred eeeEEeCCC-CeeeEeecCCCceeEEEEecCCCEEEEEeCCe--------------------------------------
Q psy11524 148 ASFVWDTDG-RQLYSSLTHDHPISSLAWAPGGDMFAVGSYNT-------------------------------------- 188 (323)
Q Consensus 148 ~i~v~d~~~-~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~~-------------------------------------- 188 (323)
+.|.+. +...++.-.. ....++++|+|+++++.+.+.
T Consensus 179 ---vID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 179 ---AVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp ---EEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred ---EEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 888864 4444444322 457788999999988887531
Q ss_pred -EEEEeCCC--Cee-eecCCCCccEEEEEEcCCCCEEEEEecCc--EEEEEcCCCc------------eeeeecCCCCcc
Q psy11524 189 -LRLCDKVG--WSH-SLDKPDTGSVYDLVWSNDATQIAGACANV--IHIFDISSSS------------SSNVTAPLSHSH 250 (323)
Q Consensus 189 -i~i~d~~~--~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--i~iwd~~~~~------------~~~~~~~~~~~~ 250 (323)
|.+.|.+. ... .....-.....++.++|||+++++++... |.++|+.+.+ ...+ .....
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~---v~vG~ 331 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE---PELGL 331 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC---CBCCS
T ss_pred cEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEE---cCCCC
Confidence 34444332 111 10111123456789999999998887655 9999998653 2222 23345
Q ss_pred ceEEEEEccCCCCccceEEEEeCCCCeEEEecccc--------------cCC-----CCccceeEEEEeeCCCeeEeeec
Q psy11524 251 EITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS--------------LDK-----PDTGSVYDLVWSSDATQIAGACA 311 (323)
Q Consensus 251 ~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~--------------~~~-----~~~~~v~~~~~s~~g~~l~s~~~ 311 (323)
....++|+|+| ....+.-.++.+..|++... ... +|...-.++..+|||++|+++..
T Consensus 332 gP~h~aF~~dG----~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 332 GPLHTAFDGRG----NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp CEEEEEECTTS----EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CcceEEECCCC----eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 67889999997 33334445666777776551 000 11111123355799999987653
No 229
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.03 E-value=1.3e-07 Score=74.71 Aligned_cols=191 Identities=12% Similarity=0.062 Sum_probs=113.3
Q ss_pred CeEEEEECCCCCEEEEEcC--CCceEeeeEEeCC-CCeeeEeecCCC-ceeEEEEecCCCEEEEEeC-C-eEEEEeCCCC
Q psy11524 124 LILKVAWCSSTDLILSGGE--DCKYKASFVWDTD-GRQLYSSLTHDH-PISSLAWAPGGDMFAVGSY-N-TLRLCDKVGW 197 (323)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~--d~~i~~i~v~d~~-~~~~~~~~~~~~-~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~ 197 (323)
....+.|+||+.+.++.+. ++.|. ++|+. ++.+..+.-... ....+++ ++..++.+.. + .+.++|..+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~---~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVR---QVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEE---EEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEETTCSEEEEEETTTT
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEE---EEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEecCCEEEEEECCCC
Confidence 3579999998755555443 57899 99996 555555542221 2234444 4667777776 4 9999998765
Q ss_pred ee-eecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCcc---ceEEEEEccCCC-----Cccce
Q psy11524 198 SH-SLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSH---EITQLAVNQTGS-----LQERH 267 (323)
Q Consensus 198 ~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~p~g~-----~~d~~ 267 (323)
.. ..+..... ....+++||+.|+++..++ |.++|..+.+.+..+....... .++.+.|. ++. ...+.
T Consensus 97 ~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 97 SNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp EEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred cEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 33 33321111 1234566888888777667 9999999988877743322222 35567777 542 12234
Q ss_pred EEEEeCCCCeEEEecccc-c-----CC--CCccceeEEEEeeCCC-eeEeeecCCeEEEEEeec
Q psy11524 268 VAFIDKNRDLYLSMWSHS-L-----DK--PDTGSVYDLVWSSDAT-QIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 268 l~~~~~~~~~~~~~~~~~-~-----~~--~~~~~v~~~~~s~~g~-~l~s~~~dg~i~~~~l~~ 322 (323)
|.+.|......+-.+... . .. ......+.++|+|+++ .++++...+.+.+-++.+
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 444444332221111110 0 00 0013568999999986 555777888888888764
No 230
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.01 E-value=2.4e-07 Score=76.34 Aligned_cols=229 Identities=10% Similarity=-0.008 Sum_probs=131.7
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeec--------------------cCCCeEEEEECC-CCCEEEE
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQA--------------------HDGLILKVAWCS-STDLILS 139 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~--------------------~~~~v~~~~~~~-~~~~l~~ 139 (323)
....+++|+++|+.+.++..+ +.|..|+..+. ...+.. ....+..+++.+ +++ |+.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQD-GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTT-SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CCceEEEEcCCCCEEEEEcCC-CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 345678899998867666544 57888887654 333321 123578999998 565 444
Q ss_pred EcCCCceEeeeEEeCCCCeeeEeecC-----CCceeEEEEec-CCCEEEEEeC------------------CeEEEEeCC
Q psy11524 140 GGEDCKYKASFVWDTDGRQLYSSLTH-----DHPISSLAWAP-GGDMFAVGSY------------------NTLRLCDKV 195 (323)
Q Consensus 140 ~~~d~~i~~i~v~d~~~~~~~~~~~~-----~~~v~~~~~~p-~~~~l~~~~~------------------~~i~i~d~~ 195 (323)
+...+.+. .+|.++..+..+... ......+++.| +|+++++... +.|..+|..
T Consensus 97 ~d~~~~i~---~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 97 VDCYYHLS---VVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp EETTTEEE---EECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EECCCCEE---EEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 54445577 888875544443211 13468899999 9987665432 368888876
Q ss_pred CCeeeecCCCCccEEEEEEcCCCCEEEEEe-cCc-EEEEEcCCCc--eeeeecCCCCccceEEEEEccCCC-----Cc--
Q psy11524 196 GWSHSLDKPDTGSVYDLVWSNDATQIAGAC-ANV-IHIFDISSSS--SSNVTAPLSHSHEITQLAVNQTGS-----LQ-- 264 (323)
Q Consensus 196 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~-i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~p~g~-----~~-- 264 (323)
+...............++++|+|++|+.+. ..+ |..|++.... .... +....+ ...+++.++|. ..
T Consensus 174 ~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~--~~~~~g-P~gi~~d~~G~l~va~~~~~ 250 (322)
T 2fp8_A 174 TKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEV--LVKIPN-PGNIKRNADGHFWVSSSEEL 250 (322)
T ss_dssp TTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEE--EEECSS-EEEEEECTTSCEEEEEEEET
T ss_pred CCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccce--EEeCCC-CCCeEECCCCCEEEEecCcc
Confidence 554332222223456799999998776664 446 9999987532 1111 111122 67788888873 00
Q ss_pred --------cceEEEEeCCCCeE-EEecccccCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 265 --------ERHVAFIDKNRDLY-LSMWSHSLDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 265 --------d~~l~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
...|..++.++.+. .+.... ...-..+.++++ .+++++++...++.|..+++..
T Consensus 251 ~~~~~~~~~~~v~~~d~~G~~~~~~~~~~---g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 251 DGNMHGRVDPKGIKFDEFGNILEVIPLPP---PFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TSSTTSCEEEEEEEECTTSCEEEEEECCT---TTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred cccccCCCccEEEEECCCCCEEEEEECCC---CCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 11233333333211 111111 000134566666 4676666766788888888743
No 231
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.94 E-value=1.1e-07 Score=78.35 Aligned_cols=212 Identities=12% Similarity=0.056 Sum_probs=130.7
Q ss_pred CCeEEEEeeCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeE
Q psy11524 93 SNKVLLTQAKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISS 171 (323)
Q Consensus 93 ~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~ 171 (323)
+..+.+++.+ +.++.++..+. ..........+.++...+++. +..++.++.+. .+|.+++....+......+.+
T Consensus 107 ~~~l~v~t~~-~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~---~~d~~g~~~~~~~~~~~~~~~ 181 (330)
T 3hxj_A 107 EDILYVTSMD-GHLYAINTDGTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLY---AINPDGTEKWRFKTNDAITSA 181 (330)
T ss_dssp TTEEEEECTT-SEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEE---EECTTSCEEEEEECSSCCCSC
T ss_pred CCEEEEEecC-CEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEE---EECCCCCEeEEEecCCCceee
Confidence 4456666555 57888887743 333333444556667777776 55577778888 999986666666655566777
Q ss_pred EEEecCCCEEEEEeCCeEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCcc
Q psy11524 172 LAWAPGGDMFAVGSYNTLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSH 250 (323)
Q Consensus 172 ~~~~p~~~~l~~~~~~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~ 250 (323)
+...+++.+++.. +.+..+|..+............+.++...++|. |..++.++ +..+| .+++.+... .....
T Consensus 182 ~~~d~~g~l~v~t--~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~-~~g~~~~~~--~~~~~ 255 (330)
T 3hxj_A 182 ASIGKDGTIYFGS--DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAIN-PDGTEKWRF--KTGKR 255 (330)
T ss_dssp CEECTTCCEEEES--SSEEEECTTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEEC-TTSCEEEEE--ECSSC
T ss_pred eEEcCCCEEEEEe--CEEEEECCCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEEC-CCCCEeEEe--eCCCC
Confidence 8887788765544 888999954554444443445678888888875 55566666 88888 456555542 22222
Q ss_pred ceEEEEEccCCCCccceEEEEeCCCCeEEEecccc---cCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 251 EITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS---LDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 251 ~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
.+..+.+.+++ .|.+...++.+..++.... ........+.++...++|+ |..++.+|.+++....
T Consensus 256 ~~~~~~~~~~g-----~l~v~t~~ggl~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 256 IESSPVIGNTD-----TIYFGSYDGHLYAINPDGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNL 323 (330)
T ss_dssp CCSCCEECTTS-----CEEEECTTCEEEEECTTSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC-
T ss_pred ccccceEcCCC-----eEEEecCCCCEEEECCCCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecc
Confidence 33345555554 4555555544554443211 1111244566777777775 6668889999887653
No 232
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.93 E-value=1.5e-07 Score=78.56 Aligned_cols=203 Identities=8% Similarity=-0.055 Sum_probs=117.1
Q ss_pred eeEeccCCcceeeeee----------cc---ccc-cccceeeecCCC--------CCEEEEEEcCCCCeEEEEeeC-CeE
Q psy11524 49 NYPISPYISVLHSYAA----------SH---SWP-QALSLCRTLNVS--------PPVYSAAWSPDSNKVLLTQAK-SLV 105 (323)
Q Consensus 49 ~~~~~~~~~~~~~~~~----------~~---~~~-~~~~~~~~~~~~--------~~v~~~~~sp~~~~l~~~~~~-~~~ 105 (323)
.+.++||++.++.... ++ .+| .+.+...++.-. .....++++|||++++++... ...
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 6999999988775432 11 234 445555555321 346789999999999988643 346
Q ss_pred EEE--eCCCCceeEeeccC-------CCeEEEEE-------------------------------------CCCCCEEEE
Q psy11524 106 IKP--LSPNNKATKWQAHD-------GLILKVAW-------------------------------------CSSTDLILS 139 (323)
Q Consensus 106 v~~--~~~~~~~~~~~~~~-------~~v~~~~~-------------------------------------~~~~~~l~~ 139 (323)
+.+ +|... ...+.... +.-.-+++ .+++..++.
T Consensus 149 v~V~~iD~~t-v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~ 227 (368)
T 1mda_H 149 AGLSVPGASD-DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVW 227 (368)
T ss_dssp EEEEETTTEE-EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEE
T ss_pred EEEEEEchhh-ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEE
Confidence 777 88754 22221100 00000112 222333333
Q ss_pred EcCCCceEeeeEEeCCCCee---eEeec-------C---CCceeEEEEecCCCEEEEEe----C------CeEEEEeCCC
Q psy11524 140 GGEDCKYKASFVWDTDGRQL---YSSLT-------H---DHPISSLAWAPGGDMFAVGS----Y------NTLRLCDKVG 196 (323)
Q Consensus 140 ~~~d~~i~~i~v~d~~~~~~---~~~~~-------~---~~~v~~~~~~p~~~~l~~~~----~------~~i~i~d~~~ 196 (323)
.+. +.+. +.|..+... ..+.. . ......++++||++.++++. . +.+.++|+.+
T Consensus 228 vs~-~~V~---viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t 303 (368)
T 1mda_H 228 AVA-SSIL---QGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV 303 (368)
T ss_dssp CBS-SCCE---EEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS
T ss_pred EcC-CEEE---EEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCC
Confidence 333 5566 667643221 11110 0 11122278999998877643 2 3566999886
Q ss_pred CeeeecCCCCccEEEEEEcCCCCEE-EEEe-cCc-EEEEEcCCCceeeeecCCCCccceEEEEEcc
Q psy11524 197 WSHSLDKPDTGSVYDLVWSNDATQI-AGAC-ANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQ 259 (323)
Q Consensus 197 ~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~-~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p 259 (323)
.+......-......++|+|||+++ ++.. .++ |.++|+.+++.+.+ +... .....+++.+
T Consensus 304 ~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~--I~vg-~~P~~i~~~~ 366 (368)
T 1mda_H 304 GQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSS--VELD-KGPESLSVQN 366 (368)
T ss_dssp CCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEE--CCCC-SCCCEEECCC
T ss_pred CeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEE--EECC-CCCCEEEeec
Confidence 5443322234468999999999854 4444 477 99999999999988 4433 3444566554
No 233
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.90 E-value=8.2e-07 Score=70.20 Aligned_cols=200 Identities=6% Similarity=-0.014 Sum_probs=123.2
Q ss_pred cceeeecCCCC--CEEEEEEcCCCCeEEEEee--CCeEEEEeCCCCc--eeEeec-cCCCeEEEEECCCCCEE-EEEcCC
Q psy11524 72 LSLCRTLNVSP--PVYSAAWSPDSNKVLLTQA--KSLVIKPLSPNNK--ATKWQA-HDGLILKVAWCSSTDLI-LSGGED 143 (323)
Q Consensus 72 ~~~~~~~~~~~--~v~~~~~sp~~~~l~~~~~--~~~~v~~~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l-~~~~~d 143 (323)
.++.+++.|.. ....+.|+|++ .|+.++. ....|..+|..+. ...+.- .......+++. ++.| ++...+
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~ 85 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTC
T ss_pred ceEEEEEECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecC
Confidence 45566677764 46899999986 4554433 2468999998765 333321 11122345554 4444 445567
Q ss_pred CceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeC-CeEEEEeCCCCee-eecCC--CC---ccEEEEEEc
Q psy11524 144 CKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-NTLRLCDKVGWSH-SLDKP--DT---GSVYDLVWS 215 (323)
Q Consensus 144 ~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d~~~~~~-~~~~~--~~---~~v~~~~~~ 215 (323)
+.+. ++|.. .+.+..+..... ....+++||+.++++.. +.|.++|..+... ....- .. ..+..+.|.
T Consensus 86 ~~v~---viD~~t~~v~~~i~~g~~--~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~ 160 (266)
T 2iwa_A 86 NIGF---IYDRRTLSNIKNFTHQMK--DGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI 160 (266)
T ss_dssp SEEE---EEETTTTEEEEEEECCSS--SCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE
T ss_pred CEEE---EEECCCCcEEEEEECCCC--CeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE
Confidence 8888 99986 455566643312 22446678877776655 4999999876432 22221 11 136788888
Q ss_pred CCCCEEEEEecCc-EEEEEcCCCceeeeecCCCC-----------ccceEEEEEccCCCCccceEEEEe-CCCCeEEEec
Q psy11524 216 NDATQIAGACANV-IHIFDISSSSSSNVTAPLSH-----------SHEITQLAVNQTGSLQERHVAFID-KNRDLYLSMW 282 (323)
Q Consensus 216 ~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~-----------~~~v~~~~~~p~g~~~d~~l~~~~-~~~~~~~~~~ 282 (323)
+|+..+....++ |.+.|..+++.+..+.+.+. ......++|+|++ +.+.+.+ ....+...++
T Consensus 161 -dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~----~~lfVTgk~~~~v~~i~l 235 (266)
T 2iwa_A 161 -NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQEN----KRIFVTGKLWPKLFEIKL 235 (266)
T ss_dssp -TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTT----TEEEEEETTCSEEEEEEE
T ss_pred -CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCC----CEEEEECCCCCeEEEEEE
Confidence 775444444456 99999999998887533211 1356899999998 5565544 4556666665
Q ss_pred cc
Q psy11524 283 SH 284 (323)
Q Consensus 283 ~~ 284 (323)
..
T Consensus 236 ~~ 237 (266)
T 2iwa_A 236 HL 237 (266)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.86 E-value=7.3e-08 Score=84.02 Aligned_cols=189 Identities=10% Similarity=0.007 Sum_probs=119.9
Q ss_pred ecCCCCCEEEEEE-c-CCCCeEEEEe-----------------eCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCC
Q psy11524 77 TLNVSPPVYSAAW-S-PDSNKVLLTQ-----------------AKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTD 135 (323)
Q Consensus 77 ~~~~~~~v~~~~~-s-p~~~~l~~~~-----------------~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~ 135 (323)
.+........+++ + |+++++++++ ..++.+.+.|..+. ..++.- .+....++++|+|+
T Consensus 129 ~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V-gg~pd~~~~spdGk 207 (595)
T 1fwx_A 129 EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLV-SGNLDNCDADYEGK 207 (595)
T ss_dssp ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE-SSCCCCEEECSSSS
T ss_pred eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEe-CCCccceEECCCCC
Confidence 4445677899998 5 9999998885 23357888887765 223322 12456788999999
Q ss_pred EEEEEcCCC---------------ceE--------------------eeeEEeCCC---Ce-eeEeecCCCceeEEEEec
Q psy11524 136 LILSGGEDC---------------KYK--------------------ASFVWDTDG---RQ-LYSSLTHDHPISSLAWAP 176 (323)
Q Consensus 136 ~l~~~~~d~---------------~i~--------------------~i~v~d~~~---~~-~~~~~~~~~~v~~~~~~p 176 (323)
++++.+.+. .+. .|.|.|.+. +. +..+. -.....++.++|
T Consensus 208 ~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ip-vg~~PhGv~~sP 286 (595)
T 1fwx_A 208 WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIP-IANNPHGCNMAP 286 (595)
T ss_dssp EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEE-EESSCCCEEECT
T ss_pred EEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEe-cCCCceEEEEcC
Confidence 998888653 111 122666543 22 22332 234567899999
Q ss_pred CCCEEEEEeC--CeEEEEeCCCCe------------eeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCC-----
Q psy11524 177 GGDMFAVGSY--NTLRLCDKVGWS------------HSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISS----- 236 (323)
Q Consensus 177 ~~~~l~~~~~--~~i~i~d~~~~~------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~----- 236 (323)
||+++++++. ++|.++|+.... +.....-......++|+|+|...++...++ |..||+..
T Consensus 287 DGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~ 366 (595)
T 1fwx_A 287 DKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAY 366 (595)
T ss_dssp TSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHH
T ss_pred CCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhh
Confidence 9999999887 399999987431 222222445689999999994334455577 99999876
Q ss_pred -----CceeeeecCCCCccce-----EEEEEccCCCCccceEEEEeC
Q psy11524 237 -----SSSSNVTAPLSHSHEI-----TQLAVNQTGSLQERHVAFIDK 273 (323)
Q Consensus 237 -----~~~~~~~~~~~~~~~v-----~~~~~~p~g~~~d~~l~~~~~ 273 (323)
.+.+.+ +..|..+- ..+.++||| +++.+.+.
T Consensus 367 ~g~~~~~vi~k--idV~yqpGh~~~~~g~t~~~DG----k~l~~~Nk 407 (595)
T 1fwx_A 367 AGEKVDPIKDK--LDVHYQPGHLKTVMGETLDATN----DWLVCLSK 407 (595)
T ss_dssp HTCSCCCEEEE--EECSSCEEEEEETTTTSTTCCS----SEEEEEES
T ss_pred cccccceeEEE--eecccccccceeccceEeCCCC----CEEEEcCC
Confidence 445555 23333221 223457888 55555543
No 235
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.80 E-value=6.7e-06 Score=70.43 Aligned_cols=152 Identities=9% Similarity=0.121 Sum_probs=97.2
Q ss_pred CCEEEEEEcC-CCCeEEEEeeCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcC-CCceE-eeeEEeCCCC
Q psy11524 82 PPVYSAAWSP-DSNKVLLTQAKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGE-DCKYK-ASFVWDTDGR 157 (323)
Q Consensus 82 ~~v~~~~~sp-~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~~i~-~i~v~d~~~~ 157 (323)
.....++++| ++..|+++... +.|+.++..+. +..+.........++|+++|++|+.+.. ++.+. .+.+.+.++.
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG 215 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred CCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc
Confidence 3567899998 46677766555 68888988765 4555455567889999999996665554 22221 1114554432
Q ss_pred ee--eEeecCCCceeEEEEec-CCCEEEEEeCC-eEEEEeCCCCee-ee-cCCCCccEEEEEEcCCCCEEEEEecC-c-E
Q psy11524 158 QL--YSSLTHDHPISSLAWAP-GGDMFAVGSYN-TLRLCDKVGWSH-SL-DKPDTGSVYDLVWSNDATQIAGACAN-V-I 229 (323)
Q Consensus 158 ~~--~~~~~~~~~v~~~~~~p-~~~~l~~~~~~-~i~i~d~~~~~~-~~-~~~~~~~v~~~~~~~~~~~l~~~~~d-~-i 229 (323)
.. ..+.. ......++++| +|.++++-..+ .|..++..+... .. ..+.......++|+|+|++|+.+... + |
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 22 22322 34467889999 56544443334 999999886644 22 12223457899999999976666554 4 9
Q ss_pred EEEEcC
Q psy11524 230 HIFDIS 235 (323)
Q Consensus 230 ~iwd~~ 235 (323)
..++..
T Consensus 295 ~~~~~d 300 (430)
T 3tc9_A 295 LRSDYD 300 (430)
T ss_dssp EEEEEE
T ss_pred EEEeCC
Confidence 888765
No 236
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.78 E-value=2.7e-05 Score=61.20 Aligned_cols=191 Identities=11% Similarity=0.126 Sum_probs=123.4
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEee-ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC--C
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQ-AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD--G 156 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~--~ 156 (323)
...+..++|+|++..|++..+..+.|...|..++ ...+. ........+++.+++.++++.-.++.+. ++++. +
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~---~~~v~~~~ 102 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIY---VISLTPNS 102 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEE---EEEECTTC
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEE---EEEcCCCC
Confidence 4679999999998888887777789999998866 33332 2235678899999888767665677777 88874 2
Q ss_pred C--eeeEee------cCCCceeEEEEecCCCEEEEEeC-C--eEEEEe--CCCCeeeec-------CCCCccEEEEEEcC
Q psy11524 157 R--QLYSSL------THDHPISSLAWAPGGDMFAVGSY-N--TLRLCD--KVGWSHSLD-------KPDTGSVYDLVWSN 216 (323)
Q Consensus 157 ~--~~~~~~------~~~~~v~~~~~~p~~~~l~~~~~-~--~i~i~d--~~~~~~~~~-------~~~~~~v~~~~~~~ 216 (323)
. .+.... ........++|+|+++.|.++.+ + .|+.|+ ..+...... ......+..++++|
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp 182 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQ 182 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEET
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcC
Confidence 2 112221 12345689999999877777776 4 455555 122212211 11234578999999
Q ss_pred CCCEEEEEec-Cc-EEEEEcCCCceeeeecCCCC-------ccceEEEEEccCCCCccceEEEEeCCCCeEEE
Q psy11524 217 DATQIAGACA-NV-IHIFDISSSSSSNVTAPLSH-------SHEITQLAVNQTGSLQERHVAFIDKNRDLYLS 280 (323)
Q Consensus 217 ~~~~l~~~~~-d~-i~iwd~~~~~~~~~~~~~~~-------~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~ 280 (323)
....|++.+. .. +..+|.. ++.+..+.+... -.....++|.++| .+.+.+..+..+.+
T Consensus 183 ~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G-----~lyIvsE~n~~y~f 249 (255)
T 3qqz_A 183 QKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG-----NIYIVSEPNRFYRF 249 (255)
T ss_dssp TTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTC-----CEEEEETTTEEEEE
T ss_pred CCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCC-----CEEEEcCCceEEEE
Confidence 6555555555 45 9999955 666665444421 1256889999997 46666666544433
No 237
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.77 E-value=1.3e-06 Score=80.36 Aligned_cols=192 Identities=13% Similarity=0.070 Sum_probs=111.1
Q ss_pred CEEEEEEc-CCCCeEEEEeeCC----eEEEEeCCCCc-eeEeecc-CCCeEEEEECCCCCEEEEEcCCC--ceEeeeEEe
Q psy11524 83 PVYSAAWS-PDSNKVLLTQAKS----LVIKPLSPNNK-ATKWQAH-DGLILKVAWCSSTDLILSGGEDC--KYKASFVWD 153 (323)
Q Consensus 83 ~v~~~~~s-p~~~~l~~~~~~~----~~v~~~~~~~~-~~~~~~~-~~~v~~~~~~~~~~~l~~~~~d~--~i~~i~v~d 153 (323)
.+...+|| |||++||++.... ..|+++++.++ .. +... ......++|+|||+.|+....+. .-..|++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~-l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT-IADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC-CCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe-CCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 67889999 9999999886543 35999988765 31 1111 11134689999998888776652 223455888
Q ss_pred CCCCe---eeEee-cCCCceeEEEEecCCCEEEEEeC---C-eEEEEeCCCC--ee--e-ecCCCCccEEEEEEcCCCCE
Q psy11524 154 TDGRQ---LYSSL-THDHPISSLAWAPGGDMFAVGSY---N-TLRLCDKVGW--SH--S-LDKPDTGSVYDLVWSNDATQ 220 (323)
Q Consensus 154 ~~~~~---~~~~~-~~~~~v~~~~~~p~~~~l~~~~~---~-~i~i~d~~~~--~~--~-~~~~~~~~v~~~~~~~~~~~ 220 (323)
+.+.. ...+. .......++.|+|||++|+..+. . .|+++|+.+. .. . ..........++.|+.++.+
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l 333 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHL 333 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEE
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEE
Confidence 85432 22222 22234567899999999876653 3 7899998753 22 3 33333445566666554444
Q ss_pred EEEEecC--c---EEEEEcCCC-ceee-eecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEe
Q psy11524 221 IAGACAN--V---IHIFDISSS-SSSN-VTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSM 281 (323)
Q Consensus 221 l~~~~~d--~---i~iwd~~~~-~~~~-~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~ 281 (323)
++....+ + |..+|+.++ +... .+ .......+..+.+. + +..+.....++...++.
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li-~~~~~~~l~~~~~~--~---~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLV-DHSEDVFMESIAVR--S---NYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEE-CCCSSEEEEEEEEC--S---SEEEEEEEETTEEEEEE
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEE-CCCCCcEEEEEEEE--C---CEEEEEEEeCCEEEEEE
Confidence 4454443 2 667777642 2222 11 12222245555554 3 14555566666544443
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.76 E-value=1.5e-07 Score=77.53 Aligned_cols=217 Identities=13% Similarity=0.086 Sum_probs=124.2
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCce-eEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeee
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKA-TKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLY 160 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~ 160 (323)
..+.++...++|...+ ++ . . +..++..+.. ..+...........+. +..+..++.++.+. .+|.+++...
T Consensus 60 ~~~~~~~~~~~g~l~v-~t-~-~-l~~~d~~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~---~~d~~g~~~~ 130 (330)
T 3hxj_A 60 IIECRPSIGKDGTIYF-GS-D-K-VYAINPDGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLY---AINTDGTEKW 130 (330)
T ss_dssp EEEECCEETTTTEECC-SS-C-E-EEEECCCGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEE---EECTTSCEEE
T ss_pred CcccceEEecCCcEEE-ec-C-c-EEEECCCCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEE---EEcCCCCEEE
Confidence 3456777777775443 32 3 2 7778865442 2222222222222333 45677788888888 9998866666
Q ss_pred EeecCCCceeEEEEecCCCEEEEEeC-CeEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCcEEEEEcCCCce
Q psy11524 161 SSLTHDHPISSLAWAPGGDMFAVGSY-NTLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANVIHIFDISSSSS 239 (323)
Q Consensus 161 ~~~~~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~i~iwd~~~~~~ 239 (323)
........+.++...+++. +..++. +.+..+|..+............+.++...+++... .++ .+|..+| .+++.
T Consensus 131 ~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~d~~g~l~-v~t-~~l~~~d-~~g~~ 206 (330)
T 3hxj_A 131 RFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPDGTEKWRFKTNDAITSAASIGKDGTIY-FGS-DKVYAIN-PDGTE 206 (330)
T ss_dssp EEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTCCEE-EES-SSEEEEC-TTSCE
T ss_pred EEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCCCCEeEEEecCCCceeeeEEcCCCEEE-EEe-CEEEEEC-CCCcE
Confidence 6665555567777777777 445555 59999998854443333334456777787888644 444 3399999 77776
Q ss_pred eeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc---cCCCCccceeEEEEeeCCCeeEeeecCCeEE
Q psy11524 240 SNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS---LDKPDTGSVYDLVWSSDATQIAGACANGSLL 316 (323)
Q Consensus 240 ~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~ 316 (323)
+.. .......+.++...++| .|.+...++.+..++.... ........+.++...++| .|..++.+|.+.
T Consensus 207 ~~~--~~~~~~~~~~~~~~~~g-----~l~v~t~~~gl~~~~~~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~ 278 (330)
T 3hxj_A 207 KWN--FYAGYWTVTRPAISEDG-----TIYVTSLDGHLYAINPDGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLY 278 (330)
T ss_dssp EEE--ECCSSCCCSCCEECTTS-----CEEEEETTTEEEEECTTSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEE
T ss_pred EEE--EccCCcceeceEECCCC-----eEEEEcCCCeEEEECCCCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEE
Confidence 665 33344557777777775 3444444444333332111 000112223445555555 566677787777
Q ss_pred EEE
Q psy11524 317 LGT 319 (323)
Q Consensus 317 ~~~ 319 (323)
.++
T Consensus 279 ~~d 281 (330)
T 3hxj_A 279 AIN 281 (330)
T ss_dssp EEC
T ss_pred EEC
Confidence 665
No 239
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.75 E-value=1.2e-06 Score=73.82 Aligned_cols=182 Identities=16% Similarity=0.126 Sum_probs=114.3
Q ss_pred CEEEEEEcCCCCeEEEEeeC-----CeEEEEeCCCCc--eeEeecc--C-CCeEEEEECCCCCEEEEEc-----------
Q psy11524 83 PVYSAAWSPDSNKVLLTQAK-----SLVIKPLSPNNK--ATKWQAH--D-GLILKVAWCSSTDLILSGG----------- 141 (323)
Q Consensus 83 ~v~~~~~sp~~~~l~~~~~~-----~~~v~~~~~~~~--~~~~~~~--~-~~v~~~~~~~~~~~l~~~~----------- 141 (323)
.-..+..+|+| .++++..+ .+.+.++|..+. +.++... . .--..+-|+|+++.+++..
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~ 217 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGL 217 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCC
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccccc
Confidence 45677889999 55555443 157888987754 4444322 1 1234578899999888874
Q ss_pred --------CCCceEeeeEEeCCCC-eeeEeecC--CCceeEEEE--ecCCCEEEEEeC------C-eEEEEeCCCCee--
Q psy11524 142 --------EDCKYKASFVWDTDGR-QLYSSLTH--DHPISSLAW--APGGDMFAVGSY------N-TLRLCDKVGWSH-- 199 (323)
Q Consensus 142 --------~d~~i~~i~v~d~~~~-~~~~~~~~--~~~v~~~~~--~p~~~~l~~~~~------~-~i~i~d~~~~~~-- 199 (323)
.+.+|. +||++.. .+.++... ......+.| +|+++++++++. + +|.+|.......
T Consensus 218 ~~~~~~~~~~d~V~---v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~ 294 (462)
T 2ece_A 218 KLEHLKDRYGNRIH---FWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA 294 (462)
T ss_dssp CTTTHHHHSCCEEE---EEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE
T ss_pred chhhhhhccCCEEE---EEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE
Confidence 367888 9999644 44444432 134556666 999999777664 2 676554332110
Q ss_pred -ee--cCC----------------CCccEEEEEEcCCCCEEEEEecCc--EEEEEcCCC---ceeeeecCCCC-------
Q psy11524 200 -SL--DKP----------------DTGSVYDLVWSNDATQIAGACANV--IHIFDISSS---SSSNVTAPLSH------- 248 (323)
Q Consensus 200 -~~--~~~----------------~~~~v~~~~~~~~~~~l~~~~~d~--i~iwd~~~~---~~~~~~~~~~~------- 248 (323)
+. ... .......+.+||||++|.++.... |.+||+... +.+..+...+.
T Consensus 295 ~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~ 374 (462)
T 2ece_A 295 EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHP 374 (462)
T ss_dssp EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCT
T ss_pred EEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeecccccc
Confidence 00 000 024578899999999999988765 999998632 34443211111
Q ss_pred -----ccceEEEEEccCCCCccceEEEEe
Q psy11524 249 -----SHEITQLAVNQTGSLQERHVAFID 272 (323)
Q Consensus 249 -----~~~v~~~~~~p~g~~~d~~l~~~~ 272 (323)
.+....++++|+| +.|.+.+
T Consensus 375 ~G~~~~ggPr~~~lSpDG----k~LyVaN 399 (462)
T 2ece_A 375 AGHKLTGAPQMLEISRDG----RRVYVTN 399 (462)
T ss_dssp TSCCCCSCCCCEEECTTS----SEEEEEC
T ss_pred ccccCCCCCCEEEEcCCC----CEEEEEc
Confidence 0135789999999 7787776
No 240
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.75 E-value=2.9e-09 Score=89.56 Aligned_cols=140 Identities=9% Similarity=0.015 Sum_probs=72.8
Q ss_pred CCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeC-CCCeeeEeecCCC-
Q psy11524 92 DSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDT-DGRQLYSSLTHDH- 167 (323)
Q Consensus 92 ~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~-~~~~~~~~~~~~~- 167 (323)
++..+++++.+ +.|+.||..+. ...+.. +.+.+..+.+++..+++++.|+.++ .||. +++.+..+..+..
T Consensus 8 ~~~~v~~gs~d-g~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~---a~d~~tG~~~w~~~~~~~~ 81 (369)
T 2hz6_A 8 PETLLFVSTLD-GSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLY---TLGSKNNEGLTKLPFTIPE 81 (369)
T ss_dssp CTTEEEEEETT-SEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEE---EC-----CCSEECSCCHHH
T ss_pred eCCEEEEEcCC-CEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEE---EEECCCCceeeeeeccCcc
Confidence 56778877766 59999997655 223333 4455555566777888888999999 9999 4666555543211
Q ss_pred cee-EEEEecCCCEEEEEeCC-eEEEEeCCCCeee-ecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeee
Q psy11524 168 PIS-SLAWAPGGDMFAVGSYN-TLRLCDKVGWSHS-LDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNV 242 (323)
Q Consensus 168 ~v~-~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~ 242 (323)
.+. +..+. ++..+++++.+ .++.||..+.... ....+. ...++|++..+++++.++ |+.||.++|+.+..
T Consensus 82 ~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 82 LVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp HHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred ccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence 110 11111 23456666664 9999998754333 322221 234567888999999999 99999999987655
No 241
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.73 E-value=1.6e-09 Score=91.09 Aligned_cols=172 Identities=7% Similarity=-0.079 Sum_probs=85.0
Q ss_pred CCCEEEEEcCCCceEeeeEEeC-CCCeeeEeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCC-CCeeeecCCCCc-c
Q psy11524 133 STDLILSGGEDCKYKASFVWDT-DGRQLYSSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKV-GWSHSLDKPDTG-S 208 (323)
Q Consensus 133 ~~~~l~~~~~d~~i~~i~v~d~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~-~~~~~~~~~~~~-~ 208 (323)
++..+++++.|+.+. .||. +++.+..+.. ..+.+..+.+++..+++++.+ .++.||.. ++.+.....+.. .
T Consensus 8 ~~~~v~~gs~dg~v~---a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLH---AVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEE---EEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eCCEEEEEcCCCEEE---EEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 577899999999999 9998 5777777765 455555556677777776665 99999985 433322222211 1
Q ss_pred EE-EEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEeccccc
Q psy11524 209 VY-DLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSL 286 (323)
Q Consensus 209 v~-~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~~ 286 (323)
+. +..+. ++..+++++.++ ++.||.++|+.+.. +..+. ...++|++ +.+.+...++.+..|+..++.
T Consensus 83 ~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~--~~~~~----~~~~~p~~----~~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 83 VQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQT--LSSAF----ADSLSPST----SLLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC--------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred cccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEE--ecCCC----cccccccC----CEEEEEecCCEEEEEECCCCC
Confidence 11 11111 344677888889 99999999998876 33332 13455655 666666666666666665421
Q ss_pred --CCCCccceeEEEEeeCC---CeeEeeecCCeEEEEEe
Q psy11524 287 --DKPDTGSVYDLVWSSDA---TQIAGACANGSLLLGTI 320 (323)
Q Consensus 287 --~~~~~~~v~~~~~s~~g---~~l~s~~~dg~i~~~~l 320 (323)
...........++++++ ..++.++.||.|+.|+.
T Consensus 152 ~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~ 190 (369)
T 2hz6_A 152 LRWNATYFDYAASLPEDDVDYKMSHFVSNGDGLVVTVDS 190 (369)
T ss_dssp CCCEEEEEEECCBCCCCCTTCCCCEEEEETSCEEEEECT
T ss_pred EEEeEecccccCccccCCccccceEEEECCCCEEEEEEC
Confidence 00000111223333332 56777888999988875
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.72 E-value=5.9e-06 Score=64.63 Aligned_cols=188 Identities=10% Similarity=0.051 Sum_probs=114.1
Q ss_pred cceeeecCCCCC--EEEEEEcCCCCeEEEEeeC-CeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEE-EcCCCc
Q psy11524 72 LSLCRTLNVSPP--VYSAAWSPDSNKVLLTQAK-SLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILS-GGEDCK 145 (323)
Q Consensus 72 ~~~~~~~~~~~~--v~~~~~sp~~~~l~~~~~~-~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~~ 145 (323)
.++.+++.|... ...+.|+ ++..+.+++.+ ...|+.+|..+. ...+.- ..........++++.|.. ...++.
T Consensus 31 ~~vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l-~~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 31 YQIVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL-GKRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC-CTTCCEEEEEEETTEEEEEESSSSE
T ss_pred eEEEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec-CCccceeEEEEeCCEEEEEEeeCCE
Confidence 456677777654 4889998 66544544443 247999998765 333322 233333222334444444 445788
Q ss_pred eEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeC-CeEEEEeCCCCee-eecCC--CC---ccEEEEEEcCC
Q psy11524 146 YKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-NTLRLCDKVGWSH-SLDKP--DT---GSVYDLVWSND 217 (323)
Q Consensus 146 i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d~~~~~~-~~~~~--~~---~~v~~~~~~~~ 217 (323)
+. ++|.+ .+.+.++.... ....+++|++.|+.+.. +.|.++|..+..+ ....- .. ..++.+.|. +
T Consensus 109 v~---v~D~~t~~~~~ti~~~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~ 181 (262)
T 3nol_A 109 GF---VWNIRNLRQVRSFNYDG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-D 181 (262)
T ss_dssp EE---EEETTTCCEEEEEECSS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EE---EEECccCcEEEEEECCC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-C
Confidence 88 99995 66666665432 22334467777666654 5999999875432 22211 11 235567776 6
Q ss_pred CCEEEEEecCc-EEEEEcCCCceeeeecCCCC----------ccceEEEEEccCCCCccceEEEEe
Q psy11524 218 ATQIAGACANV-IHIFDISSSSSSNVTAPLSH----------SHEITQLAVNQTGSLQERHVAFID 272 (323)
Q Consensus 218 ~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~----------~~~v~~~~~~p~g~~~d~~l~~~~ 272 (323)
|+..+..-.++ |.+.|.++++.+..+.+.+. ....+.+||+|++ +.+.+-.
T Consensus 182 G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~----~~lfVTG 243 (262)
T 3nol_A 182 GEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH----HRLFVTG 243 (262)
T ss_dssp TEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT----TEEEEEE
T ss_pred CEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC----CEEEEEC
Confidence 75444444566 99999999998887544321 2355889999988 5555543
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.71 E-value=2.5e-06 Score=66.75 Aligned_cols=182 Identities=12% Similarity=0.061 Sum_probs=106.7
Q ss_pred ccCCC--eEEEEECCCCCEEEEEcCCC--ceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeC-C-eEEEE
Q psy11524 120 AHDGL--ILKVAWCSSTDLILSGGEDC--KYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-N-TLRLC 192 (323)
Q Consensus 120 ~~~~~--v~~~~~~~~~~~l~~~~~d~--~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~ 192 (323)
.|... ...+.|+ ++.++.+.+.+| .|+ ++|++ ++.+..+.- ..........+++..|..... + .+.+|
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~---~vD~~Tgkv~~~~~l-~~~~FgeGit~~g~~ly~ltw~~~~v~v~ 112 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIR---KVDIESGKTLQQIEL-GKRYFGEGISDWKDKIVGLTWKNGLGFVW 112 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEE---EECTTTCCEEEEEEC-CTTCCEEEEEEETTEEEEEESSSSEEEEE
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEE---EEECCCCcEEEEEec-CCccceeEEEEeCCEEEEEEeeCCEEEEE
Confidence 45444 3788998 676667777665 888 99996 555555543 344444444445667777775 4 99999
Q ss_pred eCCCCe-eeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccc---eEEEEEccCCC-----
Q psy11524 193 DKVGWS-HSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHE---ITQLAVNQTGS----- 262 (323)
Q Consensus 193 d~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~---v~~~~~~p~g~----- 262 (323)
|..+.. +..+.. .. ....++++++.|+.+...+ |.++|..+.+.+.++.......+ ++.+.|. +|+
T Consensus 113 D~~t~~~~~ti~~-~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~ 188 (262)
T 3nol_A 113 NIRNLRQVRSFNY-DG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANV 188 (262)
T ss_dssp ETTTCCEEEEEEC-SS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred ECccCcEEEEEEC-CC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEE
Confidence 987543 333321 22 2233445777777776667 99999999988887534322223 3456665 442
Q ss_pred CccceEEEEeCCCCeE--EEeccccc-----CCCCccceeEEEEeeCCCeeEeee
Q psy11524 263 LQERHVAFIDKNRDLY--LSMWSHSL-----DKPDTGSVYDLVWSSDATQIAGAC 310 (323)
Q Consensus 263 ~~d~~l~~~~~~~~~~--~~~~~~~~-----~~~~~~~v~~~~~s~~g~~l~s~~ 310 (323)
..++.|...|...... .+++.... ........+.+||+|+++.|+..+
T Consensus 189 w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 189 WQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred ccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 1223444444433222 23332211 011134679999999987666554
No 244
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.70 E-value=9.2e-05 Score=62.45 Aligned_cols=222 Identities=11% Similarity=0.030 Sum_probs=134.6
Q ss_pred EEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEE-cCCCceEeeeEEeCCCCeeeEe
Q psy11524 85 YSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSG-GEDCKYKASFVWDTDGRQLYSS 162 (323)
Q Consensus 85 ~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~i~v~d~~~~~~~~~ 162 (323)
.|.+..+ ..+|+++... .|+..+..+. ...+......+..++|.+.+..|+.+ ...+.|. .+++++.....+
T Consensus 80 ~C~~~~~-~~~l~~~~~~--~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~---r~~~~g~~~~~~ 153 (386)
T 3v65_B 80 SCKALGP-EPVLLFANRI--DIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRIL---RANLNGSNVEEV 153 (386)
T ss_dssp CEEECSS-CCEEEEECBS--CEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEE---EEETTSCCEEEE
T ss_pred eECCccc-cceeEeecCc--cceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEE---EEecCCCCcEEE
Confidence 3445555 4455555443 5666776654 33333444567899999866555544 4567788 999987655444
Q ss_pred ec-CCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeee-ecCCCCccEEEEEEcCCCCEEEEEe-cC-c-EEEEEcC
Q psy11524 163 LT-HDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHS-LDKPDTGSVYDLVWSNDATQIAGAC-AN-V-IHIFDIS 235 (323)
Q Consensus 163 ~~-~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~-i~iwd~~ 235 (323)
.. .......+++++.+..|+.+.. . .|.+.++.+.... ...........++++|.+..|+... .. + |..+++.
T Consensus 154 ~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 154 VSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp ECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 32 2345678999987666666655 4 8999998865433 3333345689999999766665554 34 5 8888876
Q ss_pred CCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCC-CeEEEecccc----cCCCCccceeEEEEeeCCCeeEeee
Q psy11524 236 SSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNR-DLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGAC 310 (323)
Q Consensus 236 ~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~-~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~ 310 (323)
....... ..........++|+|++ +.|.+.+... .+..+++... +.........++++ ..+..+++-.
T Consensus 234 G~~~~~~--~~~~~~~PnGlavd~~~----~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~ 306 (386)
T 3v65_B 234 GSGRRII--ADTHLFWPNGLTIDYAG----RRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDW 306 (386)
T ss_dssp SCSCEEE--ECSSCSCEEEEEEEGGG----TEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEET
T ss_pred CCCcEEE--EECCCCCeeeEEEeCCC----CEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeC
Confidence 4433222 23334457899999887 6676666543 3444444331 11111334567777 4555555666
Q ss_pred cCCeEEEEE
Q psy11524 311 ANGSLLLGT 319 (323)
Q Consensus 311 ~dg~i~~~~ 319 (323)
..+.|..++
T Consensus 307 ~~~~V~~~~ 315 (386)
T 3v65_B 307 HTKSINSAN 315 (386)
T ss_dssp TTTEEEEEE
T ss_pred CCCeEEEEE
Confidence 677777665
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.68 E-value=3.5e-06 Score=69.27 Aligned_cols=176 Identities=8% Similarity=-0.001 Sum_probs=112.3
Q ss_pred CCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecC--------------------CCceeEEEEec-CCCEE
Q psy11524 123 GLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTH--------------------DHPISSLAWAP-GGDMF 181 (323)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~--------------------~~~v~~~~~~p-~~~~l 181 (323)
....+++|.++++++.++..++.|. .|+.++.....+... ...+..+++.+ +++ |
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l 94 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVI---KYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-L 94 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEE---EECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-E
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEE---EECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-E
Confidence 3456789999998788888889999 999876555444310 13578899998 565 5
Q ss_pred EEEeC-CeEEEEeCCCCeeeecCC-----CCccEEEEEEcC-CCCEEEEEec-----------------Cc-EEEEEcCC
Q psy11524 182 AVGSY-NTLRLCDKVGWSHSLDKP-----DTGSVYDLVWSN-DATQIAGACA-----------------NV-IHIFDISS 236 (323)
Q Consensus 182 ~~~~~-~~i~i~d~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~l~~~~~-----------------d~-i~iwd~~~ 236 (323)
+++.. ..+..+|..+.....+.. .......+++.| +|+..++... ++ |..||..+
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 55544 478889977543322211 113478899999 9986665432 36 88999876
Q ss_pred CceeeeecCCCCccceEEEEEccCCCCccceEEEEeCC-CCeEEEecccc-------cCCCCccceeEEEEeeCCCeeEe
Q psy11524 237 SSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKN-RDLYLSMWSHS-------LDKPDTGSVYDLVWSSDATQIAG 308 (323)
Q Consensus 237 ~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~-~~~~~~~~~~~-------~~~~~~~~v~~~~~s~~g~~l~s 308 (323)
++.... .........++++|++ +.+.+.+.. +.+..+++... .... .+ ...+++.++|++.++
T Consensus 175 ~~~~~~---~~~~~~p~gia~~~dg----~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~-~g-P~gi~~d~~G~l~va 245 (322)
T 2fp8_A 175 KETTLL---LKELHVPGGAEVSADS----SFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI-PN-PGNIKRNADGHFWVS 245 (322)
T ss_dssp TEEEEE---EEEESCCCEEEECTTS----SEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC-SS-EEEEEECTTSCEEEE
T ss_pred CEEEEe---ccCCccCcceEECCCC----CEEEEEeCCCCeEEEEECCCCcCCccceEEeC-CC-CCCeEECCCCCEEEE
Confidence 654322 1112345678999998 667766543 45666665431 0011 12 678899999986666
Q ss_pred eec
Q psy11524 309 ACA 311 (323)
Q Consensus 309 ~~~ 311 (323)
...
T Consensus 246 ~~~ 248 (322)
T 2fp8_A 246 SSE 248 (322)
T ss_dssp EEE
T ss_pred ecC
Confidence 544
No 246
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.68 E-value=1.7e-05 Score=67.90 Aligned_cols=230 Identities=10% Similarity=0.078 Sum_probs=128.1
Q ss_pred CCEEEEEEcCC--CCeEEEEeeCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCC---C-ceEeeeEEeC
Q psy11524 82 PPVYSAAWSPD--SNKVLLTQAKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGED---C-KYKASFVWDT 154 (323)
Q Consensus 82 ~~v~~~~~sp~--~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d---~-~i~~i~v~d~ 154 (323)
.....++|+|+ +..|+++... ..|+.++.... +..+.........++++++|+++++.... . .+. ..+.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~---~~~~ 214 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIY---LFTR 214 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEE---EECG
T ss_pred CCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEE---EEEC
Confidence 34678999995 5566666544 57888887444 55555555668999999999944443321 1 122 3443
Q ss_pred CCCee--eEeecCCCceeEEEEec-CCCEEEEEeCC-eEEEEeCCCCee--eec-CCCCccEEEEEEcCCCCEEEEEecC
Q psy11524 155 DGRQL--YSSLTHDHPISSLAWAP-GGDMFAVGSYN-TLRLCDKVGWSH--SLD-KPDTGSVYDLVWSNDATQIAGACAN 227 (323)
Q Consensus 155 ~~~~~--~~~~~~~~~v~~~~~~p-~~~~l~~~~~~-~i~i~d~~~~~~--~~~-~~~~~~v~~~~~~~~~~~l~~~~~d 227 (323)
.+... ..+. .......++++| +|.++++-..+ .|+.+|..+... ... .........++|+|+|++|+.+...
T Consensus 215 ~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~ 293 (433)
T 4hw6_A 215 ASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG 293 (433)
T ss_dssp GGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT
T ss_pred CCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC
Confidence 22111 1222 234567789999 56544443334 899999874332 221 1122334579999999977666654
Q ss_pred -c-EEEEEcC--CCcee--eeec-CCC------------CccceEEEEE---------ccCCCCccceEEEEeCCC-CeE
Q psy11524 228 -V-IHIFDIS--SSSSS--NVTA-PLS------------HSHEITQLAV---------NQTGSLQERHVAFIDKNR-DLY 278 (323)
Q Consensus 228 -~-i~iwd~~--~~~~~--~~~~-~~~------------~~~~v~~~~~---------~p~g~~~d~~l~~~~~~~-~~~ 278 (323)
+ |+.++.. ++... ..+. ..+ .-.....+++ .++ +.|.+.+..+ .+.
T Consensus 294 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~-----g~lyvaD~~n~~I~ 368 (433)
T 4hw6_A 294 KHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDE-----YDFYFCDRDSHTVR 368 (433)
T ss_dssp TTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCC-----EEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCC-----CcEEEEECCCCEEE
Confidence 4 9998865 23211 1100 000 0123566888 444 3455554432 233
Q ss_pred EEecccc------cC----CC----------CccceeEEEEe-eCCCeeEeeecCCeEEEEEee
Q psy11524 279 LSMWSHS------LD----KP----------DTGSVYDLVWS-SDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 279 ~~~~~~~------~~----~~----------~~~~v~~~~~s-~~g~~l~s~~~dg~i~~~~l~ 321 (323)
.++.... .. .+ .-.....++++ ++|.++++-..+++|+..++.
T Consensus 369 ~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 369 VLTPEGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EECTTSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 3322110 00 00 01236789999 677777777778888888764
No 247
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.67 E-value=5.2e-05 Score=59.56 Aligned_cols=198 Identities=8% Similarity=0.060 Sum_probs=117.4
Q ss_pred EeeccCCCeEEEEECCCCCEEE-EEcCCCceEeeeEEeCCCCeeeEeec-CCCceeEEEEecCCCEEEEEeCC-eEEEEe
Q psy11524 117 KWQAHDGLILKVAWCSSTDLIL-SGGEDCKYKASFVWDTDGRQLYSSLT-HDHPISSLAWAPGGDMFAVGSYN-TLRLCD 193 (323)
Q Consensus 117 ~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~i~v~d~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d 193 (323)
.+.+-...+..++|+|+++.|+ +...++.|. ..|.+++.+..+.- .....-.+++.+++.++++.-.+ .+.+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~---~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIV---EMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEE---EEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEE---EEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 4455667899999999866554 566778888 99998777776642 23567889999888655543334 899988
Q ss_pred CCCCe----eeec------CCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcC---CCceeeeecC-----CCCccceEE
Q psy11524 194 KVGWS----HSLD------KPDTGSVYDLVWSNDATQIAGACANV-IHIFDIS---SSSSSNVTAP-----LSHSHEITQ 254 (323)
Q Consensus 194 ~~~~~----~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~---~~~~~~~~~~-----~~~~~~v~~ 254 (323)
+.... .... .........++|+|.++.|.++.+.. ..+|.+. ....+..... ......+.+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 65321 1111 12344579999999998888888776 6666554 1111111000 112335688
Q ss_pred EEEccCCC------CccceEEEEeCCCCe-EEEecccccCCC--CccceeEEEEeeCCCeeEeeecCCeEEEE
Q psy11524 255 LAVNQTGS------LQERHVAFIDKNRDL-YLSMWSHSLDKP--DTGSVYDLVWSSDATQIAGACANGSLLLG 318 (323)
Q Consensus 255 ~~~~p~g~------~~d~~l~~~~~~~~~-~~~~~~~~~~~~--~~~~v~~~~~s~~g~~l~s~~~dg~i~~~ 318 (323)
++++|... ...+.|...+.++.+ ..+.+..+.... --.....|+|.++|+ |+..++-..++.+
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~n~~y~f 249 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEPNRFYRF 249 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETTTEEEEE
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCCceEEEE
Confidence 99999763 222344444444442 222222111000 013568999999997 4544666655444
No 248
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.66 E-value=7.7e-05 Score=60.75 Aligned_cols=220 Identities=9% Similarity=0.007 Sum_probs=124.2
Q ss_pred ceeEeeEeccCCcceeeeeecc---ccccccceeeecCCCCCEEEEEEcCCCCeEEEEeeC-CeEEEEeCCCC-ceeEee
Q psy11524 45 GTVINYPISPYISVLHSYAASH---SWPQALSLCRTLNVSPPVYSAAWSPDSNKVLLTQAK-SLVIKPLSPNN-KATKWQ 119 (323)
Q Consensus 45 ~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~-~~~v~~~~~~~-~~~~~~ 119 (323)
.....+.++|++..+..-...+ .++...+....+........++++++|+.+++.... ...|..++... .+..+.
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~ 111 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLL 111 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEE
Confidence 3456788888875222111111 133333333333445678899999999965543322 23465555433 333322
Q ss_pred c--cCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCe--eeEee---------cCCCceeEEEEecCCCEEEEEeC
Q psy11524 120 A--HDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQ--LYSSL---------THDHPISSLAWAPGGDMFAVGSY 186 (323)
Q Consensus 120 ~--~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~--~~~~~---------~~~~~v~~~~~~p~~~~l~~~~~ 186 (323)
. .......++..+++..+++-..++.|. ++|..+.. +.... ..-.....+ +|+++.|+++..
T Consensus 112 ~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~---~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 112 TLPDAIFLNGITPLSDTQYLTADSYRGAIW---LIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp ECTTCSCEEEEEESSSSEEEEEETTTTEEE---EEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred eCCCccccCcccccCCCcEEEEECCCCeEE---EEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 1 122345566566555555555678777 88876432 21111 111234555 888888877776
Q ss_pred -C-eEEEEeCCC-Cee---eecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEc-
Q psy11524 187 -N-TLRLCDKVG-WSH---SLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVN- 258 (323)
Q Consensus 187 -~-~i~i~d~~~-~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~- 258 (323)
. .|..+|+.. ... ..+. .......++++++|++.++....+ |.++|.. ++......+........+++|.
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECC
T ss_pred CCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEec
Confidence 4 999999764 111 1111 113467789999998766655566 9999965 6553211122223567899998
Q ss_pred --cCCCCccceEEEEeCCC
Q psy11524 259 --QTGSLQERHVAFIDKNR 275 (323)
Q Consensus 259 --p~g~~~d~~l~~~~~~~ 275 (323)
|++ +.|.+.+..+
T Consensus 265 ~~~d~----~~LyVt~~~~ 279 (306)
T 2p4o_A 265 TEGDC----TAIYVVTNGG 279 (306)
T ss_dssp STTTT----TEEEEEECTT
T ss_pred ccCCC----CEEEEECCCC
Confidence 787 7888776643
No 249
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.64 E-value=0.00031 Score=65.20 Aligned_cols=222 Identities=10% Similarity=0.036 Sum_probs=140.0
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeec---------cCCCeEEEEECCCCCEEEEEcCCCceEeee
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQA---------HDGLILKVAWCSSTDLILSGGEDCKYKASF 150 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~---------~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~ 150 (323)
...|.++...++|..-+ |..++ -|..++.... ...+.. ....|.++...++|+.|..|+.++.+.
T Consensus 356 ~~~V~~i~~d~~g~lWi-Gt~~~-Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~--- 430 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWI-GTNDG-GLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLS--- 430 (795)
T ss_dssp CSSEEEEEECTTSCEEE-EESSS-CEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEE---
T ss_pred CCeeEEEEECCCCCEEE-EECCC-CeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCcee---
Confidence 45699999999887554 54553 4667776654 333321 235688998888888455667667788
Q ss_pred EEeCCCCeeeEeec-----CCCceeEEEEecCCCEEEEEeCCeEEEEeCCCCeeeecCC-------CCccEEEEEEcCCC
Q psy11524 151 VWDTDGRQLYSSLT-----HDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHSLDKP-------DTGSVYDLVWSNDA 218 (323)
Q Consensus 151 v~d~~~~~~~~~~~-----~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~~~~~~~~-------~~~~v~~~~~~~~~ 218 (323)
.+|.++.....+.. ....|.++...++|++.+... +.+.+||..+........ ....|.++...++|
T Consensus 431 ~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g 509 (795)
T 4a2l_A 431 ILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHK 509 (795)
T ss_dssp EEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTC
T ss_pred EEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCC
Confidence 99987655555542 235688999888887655544 668889987654443321 23568999999998
Q ss_pred CEEEEEecCcEEEEEcCCCceeeeecC--C---CCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-------c
Q psy11524 219 TQIAGACANVIHIFDISSSSSSNVTAP--L---SHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-------L 286 (323)
Q Consensus 219 ~~l~~~~~d~i~iwd~~~~~~~~~~~~--~---~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-------~ 286 (323)
+..+.. .+|+..||..+++. . +.. . .....|.++...++| .|.++... .+..++.... .
T Consensus 510 ~lWigt-~~Gl~~~~~~~~~~-~-~~~~~~~~~l~~~~i~~i~~d~~g-----~lWigT~~-Gl~~~d~~~~~~~~~~~~ 580 (795)
T 4a2l_A 510 RLWIGG-EEGLSVFKQEGLDI-Q-KASILPVSNVTKLFTNCIYEASNG-----IIWVGTRE-GFYCFNEKDKQIKRYNTT 580 (795)
T ss_dssp CEEEEE-SSCEEEEEEETTEE-E-ECCCSCSCGGGGSCEEEEEECTTS-----CEEEEESS-CEEEEETTTTEEEEECGG
T ss_pred CEEEEe-CCceEEEeCCCCeE-E-EecCCCCCCCCCCeeEEEEECCCC-----CEEEEeCC-CceeECCCCCcEEEeCCC
Confidence 755544 44599999877665 2 101 1 123468888888876 45555443 4555554332 1
Q ss_pred CCCCccceeEEEEeeCCCeeEeeecCCeEEEEE
Q psy11524 287 DKPDTGSVYDLVWSSDATQIAGACANGSLLLGT 319 (323)
Q Consensus 287 ~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~ 319 (323)
.......|.++...++|++.+++ .+| |..++
T Consensus 581 ~gl~~~~i~~i~~d~~g~lWi~t-~~G-l~~~~ 611 (795)
T 4a2l_A 581 NGLPNNVVYGILEDSFGRLWLST-NRG-ISCFN 611 (795)
T ss_dssp GTCSCSCEEEEEECTTSCEEEEE-TTE-EEEEE
T ss_pred CCCchhheEEEEECCCCCEEEEc-CCc-eEEEc
Confidence 12234568889888888765554 444 34443
No 250
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.63 E-value=3.9e-06 Score=76.16 Aligned_cols=218 Identities=11% Similarity=0.022 Sum_probs=130.9
Q ss_pred CCCeEEEEeeCCeEEEEeCCCCc--eeEeecc-C----CCeEE-EEECCCCCEEEEEcC------CCceEeeeEEeCC-C
Q psy11524 92 DSNKVLLTQAKSLVIKPLSPNNK--ATKWQAH-D----GLILK-VAWCSSTDLILSGGE------DCKYKASFVWDTD-G 156 (323)
Q Consensus 92 ~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~-~----~~v~~-~~~~~~~~~l~~~~~------d~~i~~i~v~d~~-~ 156 (323)
++..+++++.+ +.|+.+|..+. +-.+... . ..+.+ ... .+..+++++. ++.|. .+|.+ +
T Consensus 127 ~~~~v~v~~~d-g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~---a~D~~tG 200 (677)
T 1kb0_A 127 WKGKVYVGAWD-GRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYIT---AYDAETG 200 (677)
T ss_dssp ETTEEEEECTT-SEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEE---EEETTTC
T ss_pred ECCEEEEEcCC-CEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEE---EEECCCC
Confidence 45667776655 58888887654 2233322 1 11111 111 2345555543 68888 99984 7
Q ss_pred CeeeEeecCCCc--------------------------------eeEEEEecCCCEEEEEeCC-----------------
Q psy11524 157 RQLYSSLTHDHP--------------------------------ISSLAWAPGGDMFAVGSYN----------------- 187 (323)
Q Consensus 157 ~~~~~~~~~~~~--------------------------------v~~~~~~p~~~~l~~~~~~----------------- 187 (323)
+.+..+...... ...++++|++..++.+..+
T Consensus 201 ~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~ 280 (677)
T 1kb0_A 201 ERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNL 280 (677)
T ss_dssp CEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCT
T ss_pred cEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCe
Confidence 777666432211 1357889988888877653
Q ss_pred ---eEEEEeCCCCeee-e--cCCCC-------ccEEEEEEcCCC---CEEEEEecCc-EEEEEcCCCceeeeecCCCCc-
Q psy11524 188 ---TLRLCDKVGWSHS-L--DKPDT-------GSVYDLVWSNDA---TQIAGACANV-IHIFDISSSSSSNVTAPLSHS- 249 (323)
Q Consensus 188 ---~i~i~d~~~~~~~-~--~~~~~-------~~v~~~~~~~~~---~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~- 249 (323)
.|..+|.++.+.. . ...|. ....-+....+| ..++.++.++ ++++|.++|+.+....+....
T Consensus 281 ~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~ 360 (677)
T 1kb0_A 281 YLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNW 360 (677)
T ss_dssp TTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSS
T ss_pred eeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCc
Confidence 3888998754333 2 11121 122233334477 6788899999 999999999987653222100
Q ss_pred --------cce------------------------EEEEEccCCC-----C-----------------------------
Q psy11524 250 --------HEI------------------------TQLAVNQTGS-----L----------------------------- 263 (323)
Q Consensus 250 --------~~v------------------------~~~~~~p~g~-----~----------------------------- 263 (323)
.++ ..++++|++. .
T Consensus 361 ~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 440 (677)
T 1kb0_A 361 ASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGW 440 (677)
T ss_dssp EEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTC
T ss_pred ccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccccccccc
Confidence 001 1355666542 0
Q ss_pred --------------ccceEEEEeCCCCeEEEecccccCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 264 --------------QERHVAFIDKNRDLYLSMWSHSLDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 264 --------------~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
..+.|..+|......+|.... ..++.+..++.++..++.++.||.+++|++.
T Consensus 441 ~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~------~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 441 NTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH------VSPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp CCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE------SSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred ccccccccccCCCCCccEEEEEeCCCCcEEeecCC------CCCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 014566677766667777654 3445556677788889999999999999864
No 251
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.63 E-value=0.00013 Score=60.57 Aligned_cols=224 Identities=11% Similarity=0.030 Sum_probs=134.5
Q ss_pred CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEE-cCCCceEeeeEEeCCCCeee
Q psy11524 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSG-GEDCKYKASFVWDTDGRQLY 160 (323)
Q Consensus 83 ~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~i~v~d~~~~~~~ 160 (323)
..+|.+..+ ..+|+++... .|+..+..+. ...+......+..++|++.+..|+.+ ...+.|. .+++++....
T Consensus 35 ~~~C~~~~~-~~~ll~~~~~--~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~---r~~~~g~~~~ 108 (349)
T 3v64_C 35 RRSCKALGP-EPVLLFANRI--DIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRIL---RANLNGSNVE 108 (349)
T ss_dssp SSCEEESSS-CCEEEEECBS--CEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEE---EEETTSCSCE
T ss_pred CCccccccc-CceeEeeccc--ceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceE---EEecCCCCce
Confidence 345556666 4456555443 4666676654 33333344567899999866655554 4567788 9999766554
Q ss_pred Eeec-CCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeee-ecCCCCccEEEEEEcCCCCEEEEEe-cC-c-EEEEE
Q psy11524 161 SSLT-HDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHS-LDKPDTGSVYDLVWSNDATQIAGAC-AN-V-IHIFD 233 (323)
Q Consensus 161 ~~~~-~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~-~d-~-i~iwd 233 (323)
.+.. .......+++.+.+..|+.+.. . .|.+.++.+.... .....-.....++++|.+..|+... .. + |..++
T Consensus 109 ~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 109 EVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp EEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 4432 2345678999986666666555 3 9999998865433 3333345689999999665555444 44 6 88888
Q ss_pred cCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCC-CeEEEecccc----cCCCCccceeEEEEeeCCCeeEe
Q psy11524 234 ISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNR-DLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAG 308 (323)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~-~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s 308 (323)
+.... ...+ ..........++++|++ +.|.+.+... .+..+++... +.........++++ .++..+++
T Consensus 189 ~dG~~-~~~~-~~~~~~~PnGla~d~~~----~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~t 261 (349)
T 3v64_C 189 MDGSG-RRII-ADTHLFWPNGLTIDYAG----RRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWT 261 (349)
T ss_dssp TTSCS-CEES-CCSSCSCEEEEEEETTT----TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEE
T ss_pred CCCCC-cEEE-EECCCCCcceEEEeCCC----CEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEe
Confidence 76433 3321 22334467899999987 6666666543 3444444331 11111344567777 35555555
Q ss_pred eecCCeEEEEE
Q psy11524 309 ACANGSLLLGT 319 (323)
Q Consensus 309 ~~~dg~i~~~~ 319 (323)
-...+.|...+
T Consensus 262 d~~~~~V~~~~ 272 (349)
T 3v64_C 262 DWHTKSINSAN 272 (349)
T ss_dssp ETTTTEEEEEE
T ss_pred cCCCCeEEEEE
Confidence 55666666654
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.59 E-value=1.5e-05 Score=62.47 Aligned_cols=176 Identities=9% Similarity=0.039 Sum_probs=103.5
Q ss_pred eEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeee-
Q psy11524 125 ILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHS- 200 (323)
Q Consensus 125 v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~- 200 (323)
...+.|+ ++.+..+.+.+|.|+ ++|++ ++.+..+ ...........+++..|..... + .+.+||..+....
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~---~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLR---QLSLESAQPVWME--RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEE---ECCSSCSSCSEEE--ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred cceEEEE-CCEEEEEcCCCCEEE---EEECCCCcEEeEE--CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 4688887 466777888889999 99996 5555555 3334444333445666666665 4 9999998865433
Q ss_pred ecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccc---eEEEEEccCCC-----CccceEEEE
Q psy11524 201 LDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHE---ITQLAVNQTGS-----LQERHVAFI 271 (323)
Q Consensus 201 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~---v~~~~~~p~g~-----~~d~~l~~~ 271 (323)
.+. ....-..+ +++++.|+.+..++ |.++|..+.+.+.++.......+ ++.+.|. +|+ ...+.|...
T Consensus 131 ti~-~~~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 131 TTR-YSGEGWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp EEE-CSSCCCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEE
T ss_pred EEe-CCCceeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEE
Confidence 332 22222333 35678888877677 99999999998887544333332 3556665 442 122344444
Q ss_pred eCCCCe--EEEeccccc------CCCCccceeEEEEeeCCCeeEeee
Q psy11524 272 DKNRDL--YLSMWSHSL------DKPDTGSVYDLVWSSDATQIAGAC 310 (323)
Q Consensus 272 ~~~~~~--~~~~~~~~~------~~~~~~~v~~~~~s~~g~~l~s~~ 310 (323)
|..... ..+++.... ........+.+||+|+++.|+..+
T Consensus 207 Dp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 207 DPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred eCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 443321 223332110 111134679999999877555444
No 253
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.59 E-value=1.6e-05 Score=73.18 Aligned_cols=185 Identities=9% Similarity=0.050 Sum_probs=104.5
Q ss_pred CeEEEEEC-CCCCEEEEEcC-CC----ceEeeeEEeCCCC-eeeEeecCCCceeEEEEecCCCEEEEEeCC------eEE
Q psy11524 124 LILKVAWC-SSTDLILSGGE-DC----KYKASFVWDTDGR-QLYSSLTHDHPISSLAWAPGGDMFAVGSYN------TLR 190 (323)
Q Consensus 124 ~v~~~~~~-~~~~~l~~~~~-d~----~i~~i~v~d~~~~-~~~~~~~~~~~v~~~~~~p~~~~l~~~~~~------~i~ 190 (323)
.+...+|| |||++||.+.. +| .|+ ++|+++. .... ........+++|+|||+.|+....+ .|+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~---v~dl~~g~~~l~-~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIE---FKRISDPSQTIA-DKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEE---EEETTCTTCCCC-CCEEEECSCCEECSSTTEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEE---EEECCCCCEeCC-ccccCceeeEEEecCCCEEEEEEECCCCCCCEEE
Confidence 57889999 99998886543 23 366 9999754 3211 0011123568999999887776542 577
Q ss_pred EEeCCCCe---eeec-CCCCccEEEEEEcCCCCEEEEEec---Cc-EEEEEcCCCc-ee--eeecCCCCccceEEEEEcc
Q psy11524 191 LCDKVGWS---HSLD-KPDTGSVYDLVWSNDATQIAGACA---NV-IHIFDISSSS-SS--NVTAPLSHSHEITQLAVNQ 259 (323)
Q Consensus 191 i~d~~~~~---~~~~-~~~~~~v~~~~~~~~~~~l~~~~~---d~-i~iwd~~~~~-~~--~~~~~~~~~~~v~~~~~~p 259 (323)
++++.+.. .... .........+.|+|||++|+..+. .. |+++|+.++. .. ..+ .........++.|+.
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l-~~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIV-RPREKGVRYDVQMHG 329 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEES-SCCCTTCCEEEEEET
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEe-ecCCCCceEEEeeee
Confidence 88876532 1222 223345678899999999887653 23 8999988762 12 221 233344555565544
Q ss_pred CCCCccceEEEEeCC--CC--eEEEeccc-c---c-CCCCcc--ceeEEEEeeCCC-eeEeeecCCeEEEEE
Q psy11524 260 TGSLQERHVAFIDKN--RD--LYLSMWSH-S---L-DKPDTG--SVYDLVWSSDAT-QIAGACANGSLLLGT 319 (323)
Q Consensus 260 ~g~~~d~~l~~~~~~--~~--~~~~~~~~-~---~-~~~~~~--~v~~~~~s~~g~-~l~s~~~dg~i~~~~ 319 (323)
.+ ..+.+.+.+ +. +..+++.. . . .-.+.. .+..+++ .++ ++++...+|..++|-
T Consensus 330 g~----~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 330 TS----HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp TT----EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEEEEEEETTEEEEEE
T ss_pred CC----EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEEEEEEeCCEEEEEE
Confidence 32 333333333 22 33444432 1 1 111222 3445554 444 555777788766654
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.59 E-value=2e-05 Score=61.71 Aligned_cols=182 Identities=9% Similarity=0.013 Sum_probs=112.8
Q ss_pred ceeeecCCCC--CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCe--EEEEECCCCCEEEEEcCCCce
Q psy11524 73 SLCRTLNVSP--PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLI--LKVAWCSSTDLILSGGEDCKY 146 (323)
Q Consensus 73 ~~~~~~~~~~--~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~i 146 (323)
++.+++.|.. ....+.|+ ++.|..+....+.|+.+|..+. ...+ -.... ..+++.. ++.......++.+
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g-~~Ly~ltw~~~~v 118 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDG-ERLYQLTWTEGLL 118 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECS-SCEEEEESSSCEE
T ss_pred EEEEEEcCCCccccceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeC-CEEEEEEccCCEE
Confidence 5566676654 45789997 3566666555568999998765 3333 22233 3355543 2444445568888
Q ss_pred EeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeC-CeEEEEeCCCCeee-ecCC--CC---ccEEEEEEcCCC
Q psy11524 147 KASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-NTLRLCDKVGWSHS-LDKP--DT---GSVYDLVWSNDA 218 (323)
Q Consensus 147 ~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d~~~~~~~-~~~~--~~---~~v~~~~~~~~~ 218 (323)
. +||.+ .+.+.++... ..-..++ +|++.|+.+.. +.|.++|..+..+. ...- .. ..+..+.|. +|
T Consensus 119 ~---V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG 191 (268)
T 3nok_A 119 F---TWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NG 191 (268)
T ss_dssp E---EEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred E---EEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CC
Confidence 8 99996 5566666543 2223444 56777766654 49999998764332 2211 21 235677877 77
Q ss_pred CEEEEEecCc-EEEEEcCCCceeeeecCCC-----------CccceEEEEEccCCCCccceEEE
Q psy11524 219 TQIAGACANV-IHIFDISSSSSSNVTAPLS-----------HSHEITQLAVNQTGSLQERHVAF 270 (323)
Q Consensus 219 ~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~-----------~~~~v~~~~~~p~g~~~d~~l~~ 270 (323)
+..+..-.+. |.+.|.++++.+..+.+.+ .....+.+|++|++ +.+.+
T Consensus 192 ~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~----~rlfV 251 (268)
T 3nok_A 192 VIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGS----GRIFM 251 (268)
T ss_dssp EEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTT----CCEEE
T ss_pred EEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCC----CEEEE
Confidence 5444444566 9999999999888754321 12356889999987 45554
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.57 E-value=0.00048 Score=63.92 Aligned_cols=223 Identities=9% Similarity=0.048 Sum_probs=141.9
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeec--------cCCCeEEEEECCCCCEEEEEcCCCceEeeeE
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQA--------HDGLILKVAWCSSTDLILSGGEDCKYKASFV 151 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v 151 (323)
...|.++...++|...+ |... | |..++.... ...+.. ....|.++...++|.+. .|+.++-|. .
T Consensus 262 ~~~i~~i~~d~~g~lWi-gt~~-G-l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-igt~~~Gl~---~ 334 (795)
T 4a2l_A 262 SNYIRSLAMDSQNRLWI-GTFN-D-LNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMW-LGTYFGGLN---Y 334 (795)
T ss_dssp CSBEEEEEECTTSCEEE-EESS-C-EEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEE-EEESSSCEE---E
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-h-hheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEE-EEECCCCeE---E
Confidence 35699999999887665 4344 3 666776544 323321 23569999999888755 456666677 8
Q ss_pred EeCCCCeeeEeec-------CCCceeEEEEecCCCEEEEEeC-CeEEEEeCCCCeeeecC-C--------CCccEEEEEE
Q psy11524 152 WDTDGRQLYSSLT-------HDHPISSLAWAPGGDMFAVGSY-NTLRLCDKVGWSHSLDK-P--------DTGSVYDLVW 214 (323)
Q Consensus 152 ~d~~~~~~~~~~~-------~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d~~~~~~~~~~-~--------~~~~v~~~~~ 214 (323)
++........+.. ....|.++...++|.+. .|+. +-|..||..+....... . ....|.++..
T Consensus 335 ~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 413 (795)
T 4a2l_A 335 YHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYV 413 (795)
T ss_dssp ECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEE
T ss_pred eCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEE
Confidence 8875444333321 23458899988888755 4565 48999998755433221 1 1356899999
Q ss_pred cCCCCEEEEEecCc-EEEEEcCCCceeeeecCC---CCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----c
Q psy11524 215 SNDATQIAGACANV-IHIFDISSSSSSNVTAPL---SHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----L 286 (323)
Q Consensus 215 ~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~ 286 (323)
.++|+.|..|+.++ |..||..+++..... .. .....|.++...++| .|.++.. +.+..++.... .
T Consensus 414 d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~-~~~~~l~~~~v~~i~~d~~g-----~lwigt~-~Gl~~~~~~~~~~~~~ 486 (795)
T 4a2l_A 414 DEKKSLVYIGTHAGGLSILHRNSGQVENFN-QRNSQLVNENVYAILPDGEG-----NLWLGTL-SALVRFNPEQRSFTTI 486 (795)
T ss_dssp ETTTTEEEEEETTTEEEEEETTTCCEEEEC-TTTSCCSCSCEEEEEECSSS-----CEEEEES-SCEEEEETTTTEEEEC
T ss_pred cCCCCEEEEEeCcCceeEEeCCCCcEEEee-cCCCCcCCCeeEEEEECCCC-----CEEEEec-CceeEEeCCCCeEEEc
Confidence 99988567777767 999998887654421 10 123578888887775 5556555 45666665432 1
Q ss_pred C------CCCccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 287 D------KPDTGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 287 ~------~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
. ..+...|.++...++|+..+... +| +..|+.
T Consensus 487 ~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G-l~~~~~ 524 (795)
T 4a2l_A 487 EKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG-LSVFKQ 524 (795)
T ss_dssp CBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC-EEEEEE
T ss_pred cccccccccCCceEEEEEECCCCCEEEEeC-Cc-eEEEeC
Confidence 0 12246789999998887655443 44 566654
No 256
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.56 E-value=0.00012 Score=63.14 Aligned_cols=151 Identities=10% Similarity=0.052 Sum_probs=95.8
Q ss_pred CEEEEEEcC-CCCeEEEEeeCCeEEEEeCCCCc-eeEeecc----CCCeEEEEE-------CCCCCEEEEEcCCC-c---
Q psy11524 83 PVYSAAWSP-DSNKVLLTQAKSLVIKPLSPNNK-ATKWQAH----DGLILKVAW-------CSSTDLILSGGEDC-K--- 145 (323)
Q Consensus 83 ~v~~~~~sp-~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~----~~~v~~~~~-------~~~~~~l~~~~~d~-~--- 145 (323)
....|+|+| ++..|+++......|++.|..++ +..+... ......++| +++|+.|+++...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 578999999 46677777666668998988775 4444322 235899999 99998666666544 2
Q ss_pred eEeeeEEeCCC--Cee-----eEeecCCCceeEEEEecCCCEEEEEeC-C-eEEEEeCC-------CCee----------
Q psy11524 146 YKASFVWDTDG--RQL-----YSSLTHDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKV-------GWSH---------- 199 (323)
Q Consensus 146 i~~i~v~d~~~--~~~-----~~~~~~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~-------~~~~---------- 199 (323)
-..+++.+... ... ..+.. ......++++|++..|+++.. + .|+.+|+. +...
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 11233665432 221 22222 234567899996666666655 4 89999976 3322
Q ss_pred ---e-ecCCCCccEEEEEEcCCCCEEEEEecC-c-EEEEEc
Q psy11524 200 ---S-LDKPDTGSVYDLVWSNDATQIAGACAN-V-IHIFDI 234 (323)
Q Consensus 200 ---~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-~-i~iwd~ 234 (323)
. ...+.....+.++|+|+|++|+.+... . |+.++.
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 1 112233457899999999976666554 4 888664
No 257
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.53 E-value=0.00023 Score=58.18 Aligned_cols=214 Identities=7% Similarity=-0.047 Sum_probs=125.2
Q ss_pred eEEEEeeCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEE-cCCCceEeeeEEeCCC----CeeeEee-cCCC
Q psy11524 95 KVLLTQAKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSG-GEDCKYKASFVWDTDG----RQLYSSL-THDH 167 (323)
Q Consensus 95 ~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~i~v~d~~~----~~~~~~~-~~~~ 167 (323)
+|+++... .|+..++... ...+......+.+++|++++..|+.+ ...+.|. .+++++ .....+. ....
T Consensus 3 ~ll~~~~~--~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~---~~~~~g~~~~~~~~~~~~~~~~ 77 (316)
T 1ijq_A 3 YLFFTNRH--EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMIC---STQLDRAHGVSSYDTVISRDIQ 77 (316)
T ss_dssp EEEEECBS--SEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEE---EEEC--------CEEEECSSCS
T ss_pred EEEEECCC--eEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEE---EEECCCCCCCcccEEEEeCCCC
Confidence 45665544 3566666554 33333345567899999876555544 4568888 999875 3333332 2234
Q ss_pred ceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeee-ecCCCCccEEEEEEcCCCCEEEEEec-C-c-EEEEEcCCCceee
Q psy11524 168 PISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHS-LDKPDTGSVYDLVWSNDATQIAGACA-N-V-IHIFDISSSSSSN 241 (323)
Q Consensus 168 ~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~-d-~-i~iwd~~~~~~~~ 241 (323)
....+++++.+..|+.+.. . .|.++|+.+.... ...........++++|.+..|+.+.. . + |...++.. ....
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~ 156 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIY 156 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeE
Confidence 5688999986666665554 4 9999998875433 22223456899999996666655543 3 5 88888653 3333
Q ss_pred eecCCCCccceEEEEEccCCCCccceEEEEeCCC-CeEEEecccc----cCC--CCccceeEEEEeeCCCeeEeeecCCe
Q psy11524 242 VTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNR-DLYLSMWSHS----LDK--PDTGSVYDLVWSSDATQIAGACANGS 314 (323)
Q Consensus 242 ~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~-~~~~~~~~~~----~~~--~~~~~v~~~~~s~~g~~l~s~~~dg~ 314 (323)
.+ ....-.....++++|++ +.|...+... .+..+++... +.. .......++++. .+..+++-...+.
T Consensus 157 ~~-~~~~~~~P~gla~d~~~----~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~ 230 (316)
T 1ijq_A 157 SL-VTENIQWPNGITLDLLS----GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA 230 (316)
T ss_dssp EE-ECSSCSCEEEEEEETTT----TEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTE
T ss_pred EE-EECCCCCceEEEEeccC----CEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCe
Confidence 21 22233567899999987 5666665432 3445554331 100 012345677774 4555556666677
Q ss_pred EEEEEe
Q psy11524 315 LLLGTI 320 (323)
Q Consensus 315 i~~~~l 320 (323)
|..++.
T Consensus 231 V~~~~~ 236 (316)
T 1ijq_A 231 IFSANR 236 (316)
T ss_dssp EEEEET
T ss_pred EEEEeC
Confidence 777653
No 258
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.52 E-value=0.00023 Score=60.03 Aligned_cols=173 Identities=10% Similarity=-0.035 Sum_probs=114.0
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEe-eccCCCeEEEEECCCCCEE-EEEcCCCceEeeeEEeCCC
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKW-QAHDGLILKVAWCSSTDLI-LSGGEDCKYKASFVWDTDG 156 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~i~v~d~~~ 156 (323)
.......++|++.+..|+.+....+.|+.++..+. ...+ .........+++.+.+..| ++-...+.|. +.++++
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~---~~~~dg 190 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIE---VANLDG 190 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEE---ECBTTS
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEE---EEeCCC
Confidence 45568899999988888887766678888887765 3333 2223345678888755544 4555567788 999886
Q ss_pred CeeeEeec-CCCceeEEEEecCCCEEEEEeC---CeEEEEeCCCCeeee-cCCCCccEEEEEEcCCCCEEEEEecC-c-E
Q psy11524 157 RQLYSSLT-HDHPISSLAWAPGGDMFAVGSY---NTLRLCDKVGWSHSL-DKPDTGSVYDLVWSNDATQIAGACAN-V-I 229 (323)
Q Consensus 157 ~~~~~~~~-~~~~v~~~~~~p~~~~l~~~~~---~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d-~-i 229 (323)
.....+.. .......++++|.+..|+.+.. +.|..+++.+..... ....-.....++++|++..|+.+... + |
T Consensus 191 ~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I 270 (386)
T 3v65_B 191 AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 270 (386)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEE
T ss_pred CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEE
Confidence 65544433 3356789999997777666655 278888888654333 22334568899999877777666554 4 9
Q ss_pred EEEEcCCCceeeeecCCCCccceEEEEE
Q psy11524 230 HIFDISSSSSSNVTAPLSHSHEITQLAV 257 (323)
Q Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 257 (323)
..+|+........ +.........+++
T Consensus 271 ~~~d~dG~~~~~~--~~~~~~~P~giav 296 (386)
T 3v65_B 271 ERANLDGSHRKAV--ISQGLPHPFAITV 296 (386)
T ss_dssp EEECTTSCSCEEE--ECSSCSSEEEEEE
T ss_pred EEEeCCCCeeEEE--EECCCCCceEEEE
Confidence 9999765433222 2223344566776
No 259
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.50 E-value=1.8e-05 Score=72.06 Aligned_cols=218 Identities=11% Similarity=0.063 Sum_probs=127.0
Q ss_pred CCeEEEEeeCCeEEEEeCCCCce--eEeec--cCCCeEEEEECC---CCCEEEEEc------CCCceEeeeEEeCC-CCe
Q psy11524 93 SNKVLLTQAKSLVIKPLSPNNKA--TKWQA--HDGLILKVAWCS---STDLILSGG------EDCKYKASFVWDTD-GRQ 158 (323)
Q Consensus 93 ~~~l~~~~~~~~~v~~~~~~~~~--~~~~~--~~~~v~~~~~~~---~~~~l~~~~------~d~~i~~i~v~d~~-~~~ 158 (323)
+..+++++.+ +.|+.+|..+.. -.+.. +......+..+| ++ .+++++ .++.|. .||.+ ++.
T Consensus 121 ~g~v~v~~~d-g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g-~v~vg~~~~~~~~~g~v~---a~D~~tG~~ 195 (689)
T 1yiq_A 121 KGKVYVGVLD-GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNG-KVVIGNGGAEFGVRGYVT---AYDAETGKE 195 (689)
T ss_dssp TTEEEEECTT-SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETT-EEEECCBCTTTCCBCEEE---EEETTTCCE
T ss_pred CCEEEEEccC-CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECC-EEEEEeCCCccCCCCEEE---EEECCCCcE
Confidence 5567766655 588888876552 22221 111111111122 34 444443 267888 99984 777
Q ss_pred eeEeecCC-------------------------------CceeEEEEecCCCEEEEEeCC-e------------------
Q psy11524 159 LYSSLTHD-------------------------------HPISSLAWAPGGDMFAVGSYN-T------------------ 188 (323)
Q Consensus 159 ~~~~~~~~-------------------------------~~v~~~~~~p~~~~l~~~~~~-~------------------ 188 (323)
+..+.... .....++++|++..++++..+ .
T Consensus 196 ~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~ 275 (689)
T 1yiq_A 196 AWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLS 275 (689)
T ss_dssp EEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTT
T ss_pred EEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeee
Confidence 76654211 011257889988888887764 3
Q ss_pred -EEEEeCCCCeee-ecC--CCC-------ccEEEEEEcCCCC---EEEEEecCc-EEEEEcCCCceeeeecCCCCc----
Q psy11524 189 -LRLCDKVGWSHS-LDK--PDT-------GSVYDLVWSNDAT---QIAGACANV-IHIFDISSSSSSNVTAPLSHS---- 249 (323)
Q Consensus 189 -i~i~d~~~~~~~-~~~--~~~-------~~v~~~~~~~~~~---~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~---- 249 (323)
|..+|.++.+.. ... .|. ..+.......+|+ .++.++.+| ++++|.++|+.+....+....
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~ 355 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKG 355 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccc
Confidence 899998754333 221 121 1222223333665 788889999 999999999987432111100
Q ss_pred ---------------------------------cceEEEEEccCCC-------------------------------C--
Q psy11524 250 ---------------------------------HEITQLAVNQTGS-------------------------------L-- 263 (323)
Q Consensus 250 ---------------------------------~~v~~~~~~p~g~-------------------------------~-- 263 (323)
..-..++++|+.. .
T Consensus 356 ~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 435 (689)
T 1yiq_A 356 MDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLR 435 (689)
T ss_dssp EETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSE
T ss_pred cCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCcc
Confidence 0001245555432 0
Q ss_pred -----------------ccceEEEEeCCCCeEEEecccccCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 264 -----------------QERHVAFIDKNRDLYLSMWSHSLDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 264 -----------------~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
.++.|..+|......+|.... ..+...-.++..+.+++.++.||.++.||..
T Consensus 436 ~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~------~~~~~~g~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 436 TGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPY------VTIFNGGTLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp ECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEE------SSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred ccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccC------CCCccCccceECCCEEEEECCCCcEEEEECC
Confidence 025677788777777787765 3333444667788899999999999999863
No 260
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.48 E-value=7.7e-05 Score=57.82 Aligned_cols=182 Identities=13% Similarity=0.105 Sum_probs=104.2
Q ss_pred ccCC--CeEEEEECCCCCEEEEEcCC--CceEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeC--CeEEEE
Q psy11524 120 AHDG--LILKVAWCSSTDLILSGGED--CKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSY--NTLRLC 192 (323)
Q Consensus 120 ~~~~--~v~~~~~~~~~~~l~~~~~d--~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~--~~i~i~ 192 (323)
.|.. ....+.|++ +.+..+.+.+ ..|+ ++|++ ++.+..+. ...........+.+..|..... +.+.+|
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~---~vD~~tgkv~~~~~-l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~ 90 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVR---KVDLETGRILQRAE-VPPPYFGAGIVAWRDRLIQLTWRNHEGFVY 90 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEE---EEETTTCCEEEEEE-CCTTCCEEEEEEETTEEEEEESSSSEEEEE
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEE---EEECCCCCEEEEEe-CCCCcceeEEEEeCCEEEEEEeeCCEEEEE
Confidence 4543 466899986 5566666664 4888 99996 55555443 2333433434444667776665 499999
Q ss_pred eCCCCeee-ecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCcc---ceEEEEEccCCC-----
Q psy11524 193 DKVGWSHS-LDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSH---EITQLAVNQTGS----- 262 (323)
Q Consensus 193 d~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~---~v~~~~~~p~g~----- 262 (323)
|..+.... .+. ....-..+ .++++.|+.+..++ |.++|..+.+.+.++....+.. .++.+.|. +|+
T Consensus 91 D~~tl~~~~ti~-~~~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanv 166 (243)
T 3mbr_X 91 DLATLTPRARFR-YPGEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANV 166 (243)
T ss_dssp ETTTTEEEEEEE-CSSCCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred ECCcCcEEEEEe-CCCCceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEE
Confidence 98865433 332 22222333 35677777776677 9999999998887754433322 23445544 332
Q ss_pred CccceEEEEeCCCCe--EEEecccccC------CCCccceeEEEEeeCCCeeEeee
Q psy11524 263 LQERHVAFIDKNRDL--YLSMWSHSLD------KPDTGSVYDLVWSSDATQIAGAC 310 (323)
Q Consensus 263 ~~d~~l~~~~~~~~~--~~~~~~~~~~------~~~~~~v~~~~~s~~g~~l~s~~ 310 (323)
...+.|...|..... ..+++..... .......+.+|++|+++.|+..+
T Consensus 167 w~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 167 WLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 122344444543332 2333332111 11134679999999877665444
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.48 E-value=0.00036 Score=57.89 Aligned_cols=173 Identities=10% Similarity=-0.044 Sum_probs=114.3
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEe-eccCCCeEEEEECCCCCE-EEEEcCCCceEeeeEEeCCC
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKW-QAHDGLILKVAWCSSTDL-ILSGGEDCKYKASFVWDTDG 156 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~~i~v~d~~~ 156 (323)
....+..++|++.+..|+.+....+.|+.++..+. ...+ .........+++.+.+.. ..+-...+.|. +.++++
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~---~~~~dG 147 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIE---VANLDG 147 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEE---EEETTS
T ss_pred CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEE---EEcCCC
Confidence 44568899999988888887666678888887765 2332 222345578899875544 45555567888 999987
Q ss_pred CeeeEee-cCCCceeEEEEecCCCEEEEEeC---CeEEEEeCCCCeeeecC-CCCccEEEEEEcCCCCEEEEEecC-c-E
Q psy11524 157 RQLYSSL-THDHPISSLAWAPGGDMFAVGSY---NTLRLCDKVGWSHSLDK-PDTGSVYDLVWSNDATQIAGACAN-V-I 229 (323)
Q Consensus 157 ~~~~~~~-~~~~~v~~~~~~p~~~~l~~~~~---~~i~i~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d-~-i 229 (323)
.....+. ........++++|.+..|+.... +.|..+++.+.....+. ..-.....++++|++..|+.+... + |
T Consensus 148 ~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I 227 (349)
T 3v64_C 148 AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVI 227 (349)
T ss_dssp CSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEE
Confidence 6554443 33456789999997666666654 37888888875444332 234568899999977777766654 4 9
Q ss_pred EEEEcCCCceeeeecCCCCccceEEEEE
Q psy11524 230 HIFDISSSSSSNVTAPLSHSHEITQLAV 257 (323)
Q Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 257 (323)
..+|+........ +.........+++
T Consensus 228 ~~~~~dG~~~~~~--~~~~~~~P~giav 253 (349)
T 3v64_C 228 ERANLDGSHRKAV--ISQGLPHPFAITV 253 (349)
T ss_dssp EEEETTSCSCEEE--ECSSCSSEEEEEE
T ss_pred EEEeCCCCceEEE--EeCCCCCceEEEE
Confidence 9999765433222 2222344566666
No 262
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.46 E-value=0.00095 Score=61.80 Aligned_cols=225 Identities=9% Similarity=0.039 Sum_probs=138.2
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeec----------cCCCeEEEEECCCCCEEEEEcCCCceEee
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQA----------HDGLILKVAWCSSTDLILSGGEDCKYKAS 149 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~----------~~~~v~~~~~~~~~~~l~~~~~d~~i~~i 149 (323)
...|.++...++|..-+ |..++ -|..++.... ...+.. ....|.++...++|.+. .|+.++-+.
T Consensus 312 ~~~v~~i~~D~~g~lWi-gt~~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl~-- 386 (781)
T 3v9f_A 312 NASARYIFQDSFNNIWI-GTWGG-GINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGIN-- 386 (781)
T ss_dssp SSCEEEEEECSSCCEEE-EEBSS-CEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCEE--
T ss_pred CCeEEEEEEeCCCCEEE-EecCC-eEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcEE--
Confidence 46799999999887544 55454 4555665543 222211 23568899888877654 455555677
Q ss_pred eEEeCCCCeeeEee----cCCCceeEEEEecCCCEEEEEeC-CeEEEEeCCCCeeeecC---CCCccEEEEEEcCCCCEE
Q psy11524 150 FVWDTDGRQLYSSL----THDHPISSLAWAPGGDMFAVGSY-NTLRLCDKVGWSHSLDK---PDTGSVYDLVWSNDATQI 221 (323)
Q Consensus 150 ~v~d~~~~~~~~~~----~~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d~~~~~~~~~~---~~~~~v~~~~~~~~~~~l 221 (323)
.++........+. .....|.++...++|.+.+ |+. +.+..+|..+....... .....|.++...++|. |
T Consensus 387 -~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-l 463 (781)
T 3v9f_A 387 -VFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-I 463 (781)
T ss_dssp -EEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-E
T ss_pred -EEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-E
Confidence 8888644333321 1235688888888886554 565 48999998765544332 1345799999998886 4
Q ss_pred EEEecCcEEEEEcCCCceeeeecCC---CCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-------cCCCCc
Q psy11524 222 AGACANVIHIFDISSSSSSNVTAPL---SHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-------LDKPDT 291 (323)
Q Consensus 222 ~~~~~d~i~iwd~~~~~~~~~~~~~---~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-------~~~~~~ 291 (323)
..++.+||..+|..+++........ .....|.++...++| .|.++...+.+..++.... ......
T Consensus 464 wigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g-----~lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~ 538 (781)
T 3v9f_A 464 WIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEG-----RFWIGTFGGGVGIYTPDMQLVRKFNQYEGFCS 538 (781)
T ss_dssp EEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTC-----CEEEEESSSCEEEECTTCCEEEEECTTTTCSC
T ss_pred EEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCC-----CEEEEEcCCCEEEEeCCCCeEEEccCCCCCCC
Confidence 4455545999998876654321011 113578888888775 5666665455555554332 112234
Q ss_pred cceeEEEEeeCCCeeEeeecCCeEEEEE
Q psy11524 292 GSVYDLVWSSDATQIAGACANGSLLLGT 319 (323)
Q Consensus 292 ~~v~~~~~s~~g~~l~s~~~dg~i~~~~ 319 (323)
..|.++...++|++.++. .+|.+..|+
T Consensus 539 ~~i~~i~~d~~g~lWi~T-~~Glv~~~d 565 (781)
T 3v9f_A 539 NTINQIYRSSKGQMWLAT-GEGLVCFPS 565 (781)
T ss_dssp SCEEEEEECTTSCEEEEE-TTEEEEESC
T ss_pred CeeEEEEECCCCCEEEEE-CCCceEEEC
Confidence 678899988888755543 366535544
No 263
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.40 E-value=0.00034 Score=54.22 Aligned_cols=186 Identities=9% Similarity=-0.014 Sum_probs=109.8
Q ss_pred ceeeecCCC--CCEEEEEEcCCCCeEEEEeeC-CeEEEEeCCCCc--eeEeeccCCCe--EEEEECCCCCEEEEEcCCCc
Q psy11524 73 SLCRTLNVS--PPVYSAAWSPDSNKVLLTQAK-SLVIKPLSPNNK--ATKWQAHDGLI--LKVAWCSSTDLILSGGEDCK 145 (323)
Q Consensus 73 ~~~~~~~~~--~~v~~~~~sp~~~~l~~~~~~-~~~v~~~~~~~~--~~~~~~~~~~v--~~~~~~~~~~~l~~~~~d~~ 145 (323)
++.+++.|. .....+.|++ +....+++.+ ...|+.+|..+. ..... -.... ..++.. +++.......++.
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~-l~~~~fgeGi~~~-~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAE-VPPPYFGAGIVAW-RDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEE-CCTTCCEEEEEEE-TTEEEEEESSSSE
T ss_pred EEEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEe-CCCCcceeEEEEe-CCEEEEEEeeCCE
Confidence 455666664 4577999986 4444443332 247888888765 33332 22222 233433 2344444556888
Q ss_pred eEeeeEEeCC-CCeeeEeecCCCceeEEEEecCCCEEEEEeC-CeEEEEeCCCCee-eecCC--CC---ccEEEEEEcCC
Q psy11524 146 YKASFVWDTD-GRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-NTLRLCDKVGWSH-SLDKP--DT---GSVYDLVWSND 217 (323)
Q Consensus 146 i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d~~~~~~-~~~~~--~~---~~v~~~~~~~~ 217 (323)
+. ++|.+ .+.+.++.... .-..++ +++..|+.+.. +.|.++|..+..+ ....- +. ..++.+.|. +
T Consensus 87 v~---v~D~~tl~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~ 159 (243)
T 3mbr_X 87 GF---VYDLATLTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-N 159 (243)
T ss_dssp EE---EEETTTTEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred EE---EEECCcCcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-C
Confidence 88 99996 55566665433 223444 56666665554 4999999876432 22211 11 245667766 6
Q ss_pred CCEEEEEecCc-EEEEEcCCCceeeeecCCC-----------CccceEEEEEccCCCCccceEEEEe
Q psy11524 218 ATQIAGACANV-IHIFDISSSSSSNVTAPLS-----------HSHEITQLAVNQTGSLQERHVAFID 272 (323)
Q Consensus 218 ~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~-----------~~~~v~~~~~~p~g~~~d~~l~~~~ 272 (323)
|+..+..-.+. |.+.|.++++.+..+.+.+ .....+.++++|++ +.+.+-.
T Consensus 160 G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~----~~lfVTG 222 (243)
T 3mbr_X 160 GELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEH----DRLFVTG 222 (243)
T ss_dssp TEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTT----TEEEEEE
T ss_pred CEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCC----CEEEEEC
Confidence 66444444556 9999999999887753321 12356889999987 5555533
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.37 E-value=0.0016 Score=60.34 Aligned_cols=221 Identities=9% Similarity=-0.020 Sum_probs=132.2
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEe----eccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKW----QAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD 155 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~----~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~ 155 (323)
...|.++...++|...+ |..+. -|..++.... ...+ ......|.++...++|.+.+ |+.++.+. .++..
T Consensus 362 ~~~v~~i~~d~~g~lWi-gt~~~-Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~---~~~~~ 435 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLWI-GTDGG-GINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNIS---YYNTR 435 (781)
T ss_dssp SSCEEEEEECTTSCEEE-EEBSS-CEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEE---EECSS
T ss_pred CcceEEEEEcCCCCEEE-EeCCC-cEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEE---EEcCC
Confidence 35799999998887554 54444 3666666543 2111 12345788998888777555 55556677 89887
Q ss_pred CCeeeEeec---CCCceeEEEEecCCCEEEEEeCCeEEEEeCCCCeeeec-CCC-----CccEEEEEEcCCCCEEEEEec
Q psy11524 156 GRQLYSSLT---HDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHSLD-KPD-----TGSVYDLVWSNDATQIAGACA 226 (323)
Q Consensus 156 ~~~~~~~~~---~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~~~~~~-~~~-----~~~v~~~~~~~~~~~l~~~~~ 226 (323)
......+.. ....|.++...++|.+.+ ++.+.+..+|..+...... ... ...|.++...++|.+. .++.
T Consensus 436 ~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igt~ 513 (781)
T 3v9f_A 436 LKKFQIIELEKNELLDVRVFYEDKNKKIWI-GTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW-IGTF 513 (781)
T ss_dssp SCEEEECCSTTTCCCCEEEEEECTTSEEEE-EETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE-EEES
T ss_pred CCcEEEeccCCCCCCeEEEEEECCCCCEEE-EECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE-EEEc
Confidence 665555532 345788888888776544 4446788999765433221 111 3578999999988754 4555
Q ss_pred -CcEEEEEcCCCceeeeecCCC-CccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-------cCCCCccceeEE
Q psy11524 227 -NVIHIFDISSSSSSNVTAPLS-HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-------LDKPDTGSVYDL 297 (323)
Q Consensus 227 -d~i~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~v~~~ 297 (323)
+|+..||..+++........+ ....|.++...++| .|.++...|-+..++.... ........|.++
T Consensus 514 ~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-----~lWi~T~~Glv~~~d~~~~~~~~~~~~~gl~~~~i~~i 588 (781)
T 3v9f_A 514 GGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKG-----QMWLATGEGLVCFPSARNFDYQVFQRKEGLPNTHIRAI 588 (781)
T ss_dssp SSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTS-----CEEEEETTEEEEESCTTTCCCEEECGGGTCSCCCCCEE
T ss_pred CCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCC-----CEEEEECCCceEEECCCCCcEEEccccCCCCCceEEEE
Confidence 448889987665433210011 23468888888775 4555544322144443321 111223467888
Q ss_pred EEeeCCCeeEeeecCCeE
Q psy11524 298 VWSSDATQIAGACANGSL 315 (323)
Q Consensus 298 ~~s~~g~~l~s~~~dg~i 315 (323)
...++|++.++ +.+|..
T Consensus 589 ~~d~~g~lW~~-t~~Gl~ 605 (781)
T 3v9f_A 589 SEDKNGNIWAS-TNTGIS 605 (781)
T ss_dssp EECSSSCEEEE-CSSCEE
T ss_pred EECCCCCEEEE-cCCceE
Confidence 88888875554 455643
No 265
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.37 E-value=2.3e-05 Score=71.12 Aligned_cols=173 Identities=12% Similarity=0.130 Sum_probs=110.7
Q ss_pred EEEEEcCCCCeEEEEeeCC------------------eEEEEeCCCCcee--Eee--ccC-------CCeEEEEECCCC-
Q psy11524 85 YSAAWSPDSNKVLLTQAKS------------------LVIKPLSPNNKAT--KWQ--AHD-------GLILKVAWCSST- 134 (323)
Q Consensus 85 ~~~~~sp~~~~l~~~~~~~------------------~~v~~~~~~~~~~--~~~--~~~-------~~v~~~~~~~~~- 134 (323)
..++++|++..++++..+. +.|..+|..+... .++ .|. .....+....+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 3578899998888776542 1488888776522 222 121 122223333467
Q ss_pred --CEEEEEcCCCceEeeeEEeCC-CCeeeEeecCC-----------Cce------------------------eEEEEec
Q psy11524 135 --DLILSGGEDCKYKASFVWDTD-GRQLYSSLTHD-----------HPI------------------------SSLAWAP 176 (323)
Q Consensus 135 --~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~-----------~~v------------------------~~~~~~p 176 (323)
..++.++.+|.+. ++|.+ ++.+..+.... .++ ..++++|
T Consensus 326 ~~~~l~~~~~~G~l~---~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp 402 (677)
T 1kb0_A 326 PRKVILHAPKNGFFF---VLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP 402 (677)
T ss_dssp EEEEEEECCTTSEEE---EEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET
T ss_pred EeeEEEEECCCCEEE---EEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC
Confidence 6789999999999 99985 66655443211 001 1578899
Q ss_pred CCCEEEEEeC--------------------------------------------CeEEEEeCCCCeeeecCCCCccEEEE
Q psy11524 177 GGDMFAVGSY--------------------------------------------NTLRLCDKVGWSHSLDKPDTGSVYDL 212 (323)
Q Consensus 177 ~~~~l~~~~~--------------------------------------------~~i~i~d~~~~~~~~~~~~~~~v~~~ 212 (323)
++.++++... +.|..||+.+.++.....+..++...
T Consensus 403 ~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g 482 (677)
T 1kb0_A 403 QTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGG 482 (677)
T ss_dssp TTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCC
T ss_pred CCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCc
Confidence 8877766431 46889998866554333344444555
Q ss_pred EEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCC
Q psy11524 213 VWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTG 261 (323)
Q Consensus 213 ~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g 261 (323)
.+..++..+++++.++ +++||.++++.+.++.. +.......+.+.++|
T Consensus 483 ~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~-~~~~~~~p~~y~~~G 531 (677)
T 1kb0_A 483 TLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT-GTGVVAAPSTYMVDG 531 (677)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC-SSCCCSCCEEEEETT
T ss_pred ceEeCCCEEEEECCCCcEEEEECCCCceeeeeeC-CCCcccCCEEEEeCC
Confidence 5666777888899999 99999999999987422 222233345566776
No 266
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.36 E-value=0.00084 Score=56.82 Aligned_cols=157 Identities=9% Similarity=-0.027 Sum_probs=107.8
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-----eeE-eeccCCCeEEEEECCC-CCEEEEEcCCCceEeeeE
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-----ATK-WQAHDGLILKVAWCSS-TDLILSGGEDCKYKASFV 151 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-----~~~-~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~i~v 151 (323)
.....+..++|++.+..|+.+....+.|+.++..+. ... +.........+++.+. +++..+-...+.|. +
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~---~ 185 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS---V 185 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE---E
T ss_pred cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEE---E
Confidence 345678999999988888887666668888877651 222 2324456788999884 44445555678888 9
Q ss_pred EeCCCCeeeEeec-CCCceeEEEEecCCCEEEEEeC---CeEEEEeCCCCeee-ecCCCCccEEEEEEcCCCCEEEEEec
Q psy11524 152 WDTDGRQLYSSLT-HDHPISSLAWAPGGDMFAVGSY---NTLRLCDKVGWSHS-LDKPDTGSVYDLVWSNDATQIAGACA 226 (323)
Q Consensus 152 ~d~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~~~~~---~~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~ 226 (323)
.++++.....+.. .......++++|.+..|+.... ..|...++.+.... .....-.....++++|++..|+.+..
T Consensus 186 ~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~ 265 (400)
T 3p5b_L 186 ADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDS 265 (400)
T ss_dssp ECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEET
T ss_pred EeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEEC
Confidence 9998766555443 4455889999997666666653 37889998875443 33333457899999998877777765
Q ss_pred C-c-EEEEEcCCCc
Q psy11524 227 N-V-IHIFDISSSS 238 (323)
Q Consensus 227 d-~-i~iwd~~~~~ 238 (323)
. . |..+|+....
T Consensus 266 ~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 266 KLHSISSIDVNGGN 279 (400)
T ss_dssp TTTEEEEEETTSCC
T ss_pred CCCEEEEEeCCCCc
Confidence 4 4 9999986543
No 267
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.32 E-value=0.00083 Score=54.92 Aligned_cols=172 Identities=12% Similarity=0.003 Sum_probs=111.0
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCce---eEeeccCCCeEEEEECCCC-CEEEEEcCCCceEeeeEEeCCCC
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKA---TKWQAHDGLILKVAWCSST-DLILSGGEDCKYKASFVWDTDGR 157 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~---~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~i~v~d~~~~ 157 (323)
....+++|++.+..|+.+....+.|+.++..+.. ..+...-.....+++.+.+ ++..+-...+.|. ++++++.
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~---~~~~dG~ 111 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIE---VSNLDGS 111 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEE---EEETTSC
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEE---EEECCCC
Confidence 3567899999888888776666688888776541 2222233456688888754 4445555667888 9999876
Q ss_pred eeeEee-cCCCceeEEEEecCCCEEEEEeC--C-eEEEEeCCCCeeee-cCCCCccEEEEEEcCCCCEEEEEecC-c-EE
Q psy11524 158 QLYSSL-THDHPISSLAWAPGGDMFAVGSY--N-TLRLCDKVGWSHSL-DKPDTGSVYDLVWSNDATQIAGACAN-V-IH 230 (323)
Q Consensus 158 ~~~~~~-~~~~~v~~~~~~p~~~~l~~~~~--~-~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d-~-i~ 230 (323)
....+. ........++++|.+..|+.+.. . .|...++.+..... ....-.....++++|++..|+.+... + |.
T Consensus 112 ~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 112 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 555543 34456789999997666666653 3 88888988654332 22234567899999977777766654 4 99
Q ss_pred EEEcCCCceeeeecCCCCccceEEEEEc
Q psy11524 231 IFDISSSSSSNVTAPLSHSHEITQLAVN 258 (323)
Q Consensus 231 iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 258 (323)
.+|+........ ..........+++.
T Consensus 192 ~~d~dG~~~~~~--~~~~~~~P~glav~ 217 (318)
T 3sov_A 192 KSNLDGTNRQAV--VKGSLPHPFALTLF 217 (318)
T ss_dssp EEETTSCSCEEE--ECSCCSCEEEEEEE
T ss_pred EEcCCCCceEEE--ecCCCCCceEEEEe
Confidence 999864332222 22233344556654
No 268
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.30 E-value=7e-05 Score=68.15 Aligned_cols=181 Identities=12% Similarity=0.149 Sum_probs=110.5
Q ss_pred EEEEcCCCCeEEEEeeCCe------------------EEEEeCCCCcee--Eeec--cC-------CCeEEEEECCCCC-
Q psy11524 86 SAAWSPDSNKVLLTQAKSL------------------VIKPLSPNNKAT--KWQA--HD-------GLILKVAWCSSTD- 135 (323)
Q Consensus 86 ~~~~sp~~~~l~~~~~~~~------------------~v~~~~~~~~~~--~~~~--~~-------~~v~~~~~~~~~~- 135 (323)
.++++|++..++++..+.. .|..+|..+... .++. |. ..+.......+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~ 318 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKP 318 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcE
Confidence 5788998888888765521 388888776522 2222 21 1222222223564
Q ss_pred --EEEEEcCCCceEeeeEEeCC-CCeeeEeecCC---------------------------------------CceeEEE
Q psy11524 136 --LILSGGEDCKYKASFVWDTD-GRQLYSSLTHD---------------------------------------HPISSLA 173 (323)
Q Consensus 136 --~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~---------------------------------------~~v~~~~ 173 (323)
.++.++.+|.++ ++|.+ ++.+....... ..-..++
T Consensus 319 ~~~v~~~~~~G~l~---~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a 395 (689)
T 1yiq_A 319 RKVLMQAPKNGFFY---VIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMS 395 (689)
T ss_dssp EEEEEECCTTSEEE---EEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCE
T ss_pred EEEEEEECCCCeEE---EEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcce
Confidence 788899999999 99985 55543221100 0012378
Q ss_pred EecCCCEEEEEeC----------------------------------------------CeEEEEeCCCCeeeecCCCCc
Q psy11524 174 WAPGGDMFAVGSY----------------------------------------------NTLRLCDKVGWSHSLDKPDTG 207 (323)
Q Consensus 174 ~~p~~~~l~~~~~----------------------------------------------~~i~i~d~~~~~~~~~~~~~~ 207 (323)
|+|+..++++... +.|+.||+.+.++.....+..
T Consensus 396 ~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~ 475 (689)
T 1yiq_A 396 YNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT 475 (689)
T ss_dssp EETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS
T ss_pred ECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC
Confidence 8998777766421 368889987665543322333
Q ss_pred cEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeC
Q psy11524 208 SVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDK 273 (323)
Q Consensus 208 ~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~ 273 (323)
......+...+.++++++.|+ ++.||.++|+.+.+++.. ......-+.|..+|+ .+|.+...
T Consensus 476 ~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~-~~~~~~p~ty~~~G~---qyv~~~~G 538 (689)
T 1yiq_A 476 IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA-SGVMAAPVTYSVDGE---QYVTFMAG 538 (689)
T ss_dssp SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS-SCCCSCCEEEEETTE---EEEEEEEC
T ss_pred CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC-CCcccCceEEEECCE---EEEEEEec
Confidence 333345556777899999999 999999999999874222 222223466777773 56665544
No 269
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.30 E-value=0.00093 Score=54.58 Aligned_cols=155 Identities=9% Similarity=-0.053 Sum_probs=105.1
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCC----c-eeEe-eccCCCeEEEEECCCCCEE-EEEcCCCceEeeeEE
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNN----K-ATKW-QAHDGLILKVAWCSSTDLI-LSGGEDCKYKASFVW 152 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~----~-~~~~-~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~i~v~ 152 (323)
......+++|++++..|+.+....+.|+.++..+ . ...+ ...-..+..+++.+.+..| ++-...+.|. +.
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~---~~ 104 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS---VA 104 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEE---EE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEE---EE
Confidence 4566889999998888888776667888888765 2 2222 2222456788998755444 4545678888 99
Q ss_pred eCCCCeeeEeec-CCCceeEEEEecCCCEEEEEeC---CeEEEEeCCCCeeeec-CCCCccEEEEEEcCCCCEEEEEecC
Q psy11524 153 DTDGRQLYSSLT-HDHPISSLAWAPGGDMFAVGSY---NTLRLCDKVGWSHSLD-KPDTGSVYDLVWSNDATQIAGACAN 227 (323)
Q Consensus 153 d~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~~~~~---~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d 227 (323)
+++++....+.. .......++++|.+..++.+.. +.|...++.+.....+ ...-.....++++|++..|+.+...
T Consensus 105 ~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~ 184 (316)
T 1ijq_A 105 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 184 (316)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred eCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECC
Confidence 998765554432 3456789999997666655554 3788888886544432 2234568899999987777766654
Q ss_pred -c-EEEEEcCCC
Q psy11524 228 -V-IHIFDISSS 237 (323)
Q Consensus 228 -~-i~iwd~~~~ 237 (323)
+ |..+|+...
T Consensus 185 ~~~I~~~d~dg~ 196 (316)
T 1ijq_A 185 LHSISSIDVNGG 196 (316)
T ss_dssp TTEEEEEETTSC
T ss_pred CCeEEEEecCCC
Confidence 4 999998643
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.29 E-value=0.00097 Score=54.50 Aligned_cols=214 Identities=12% Similarity=-0.039 Sum_probs=124.1
Q ss_pred eEEEEeeCCeEEEEeCCCCc---eeEeeccCCCeEEEEECCCCCEEEEE-cCCCceEeeeEEeCCCCe--eeEeecCCCc
Q psy11524 95 KVLLTQAKSLVIKPLSPNNK---ATKWQAHDGLILKVAWCSSTDLILSG-GEDCKYKASFVWDTDGRQ--LYSSLTHDHP 168 (323)
Q Consensus 95 ~l~~~~~~~~~v~~~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~-~~d~~i~~i~v~d~~~~~--~~~~~~~~~~ 168 (323)
+|+++.. ..|+..++.+. ..........+.+++|.+.+..|+.+ ...+.|. .+++++.. ...+......
T Consensus 6 ~ll~~~~--~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~---r~~~~g~~~~~~~~~~~l~~ 80 (318)
T 3sov_A 6 LLLYANR--RDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIK---RTEFNKTESVQNVVVSGLLS 80 (318)
T ss_dssp EEEEECE--EEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEE---EEETTSSSCCCEEEEECCSC
T ss_pred EEEEEcc--CeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEE---EEEccCCCceEEEEcCCCCC
Confidence 4555543 36777776654 11122223356789999865555444 4567788 89887542 1222223345
Q ss_pred eeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeee-ecCCCCccEEEEEEcCCCCEEEEEec--Cc-EEEEEcCCCceeee
Q psy11524 169 ISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHS-LDKPDTGSVYDLVWSNDATQIAGACA--NV-IHIFDISSSSSSNV 242 (323)
Q Consensus 169 v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~--d~-i~iwd~~~~~~~~~ 242 (323)
...+++.+.+..|+.+.. . .|.++++.+.... ...........++++|.+..|+.+.. .+ |...++.... ...
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~ 159 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFI 159 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEE
Confidence 678999986666665554 3 9999999875433 33334456899999997666666553 45 8888875432 222
Q ss_pred ecCCCCccceEEEEEccCCCCccceEEEEeCCC-CeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecCCeEEE
Q psy11524 243 TAPLSHSHEITQLAVNQTGSLQERHVAFIDKNR-DLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACANGSLLL 317 (323)
Q Consensus 243 ~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~-~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~ 317 (323)
+ ....-.....++++|++ +.|...|... .+..+++... +.........++++. .+..+.+-...+.|..
T Consensus 160 ~-~~~~l~~Pnglavd~~~----~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~ 233 (318)
T 3sov_A 160 I-INSEIYWPNGLTLDYEE----QKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILA 233 (318)
T ss_dssp E-ECSSCSCEEEEEEETTT----TEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEE
T ss_pred E-EECCCCCccEEEEeccC----CEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEE
Confidence 1 22333456899999977 6666666432 3444444321 111113445667764 3344445555677776
Q ss_pred EEe
Q psy11524 318 GTI 320 (323)
Q Consensus 318 ~~l 320 (323)
++.
T Consensus 234 ~~~ 236 (318)
T 3sov_A 234 CNK 236 (318)
T ss_dssp EET
T ss_pred EEC
Confidence 654
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.26 E-value=0.0015 Score=55.35 Aligned_cols=214 Identities=7% Similarity=-0.040 Sum_probs=127.0
Q ss_pred CeEEEEeeCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEc-CCCceEeeeEEeCCCC----eeeEe-ecCC
Q psy11524 94 NKVLLTQAKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGG-EDCKYKASFVWDTDGR----QLYSS-LTHD 166 (323)
Q Consensus 94 ~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~~i~v~d~~~~----~~~~~-~~~~ 166 (323)
.+|+++... .|+..++... ...+......+..++|++.+..|+.+. ..+.|. .+++++. ....+ ....
T Consensus 84 ~~ll~~~~~--~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~---~~~~~g~~~~~~~~~~~~~~~ 158 (400)
T 3p5b_L 84 AYLFFTNRH--EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMIC---STQLDRAHGVSSYDTVISRDI 158 (400)
T ss_dssp CEEEEEETT--EEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEE---EEEC------CCCEEEECSSC
T ss_pred ceeEEeccc--eeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEE---EEEcccCCCCCcceEEEeCCC
Confidence 355555333 6777777665 344444566788999998766665554 567788 8888652 22233 3344
Q ss_pred CceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeee-ecCCCCccEEEEEEcCCCCEEEEEec--Cc-EEEEEcCCCcee
Q psy11524 167 HPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHS-LDKPDTGSVYDLVWSNDATQIAGACA--NV-IHIFDISSSSSS 240 (323)
Q Consensus 167 ~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~--d~-i~iwd~~~~~~~ 240 (323)
.....+++.+.+..|+.+.. . .|.+.++.+.... ...........++++|.+.+|+.... .+ |...++......
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 56789999986666666655 3 9999999876443 33334456899999997666665543 35 888887654333
Q ss_pred eeecCCCCccceEEEEEccCCCCccceEEEEeCCC-CeEEEecccc----cCC--CCccceeEEEEeeCCCeeEeeecCC
Q psy11524 241 NVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNR-DLYLSMWSHS----LDK--PDTGSVYDLVWSSDATQIAGACANG 313 (323)
Q Consensus 241 ~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~-~~~~~~~~~~----~~~--~~~~~v~~~~~s~~g~~l~s~~~dg 313 (323)
.. ....-.....++++|++ +.|...|... .+...++... +.. ..-....++++ ..+..+.+-...+
T Consensus 239 ~~--~~~~l~~P~glavd~~~----~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~ 311 (400)
T 3p5b_L 239 SL--VTENIQWPNGITLDLLS----GRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINE 311 (400)
T ss_dssp EE--ECSSCSCEEEEEEETTT----TEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSC
T ss_pred EE--EECCCCceEEEEEEeCC----CEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCC
Confidence 22 23333567899999887 5666665432 3444444332 100 01123446666 2334444555566
Q ss_pred eEEEEE
Q psy11524 314 SLLLGT 319 (323)
Q Consensus 314 ~i~~~~ 319 (323)
.|..++
T Consensus 312 ~V~~~~ 317 (400)
T 3p5b_L 312 AIFSAN 317 (400)
T ss_dssp SEEEEE
T ss_pred eEEEEE
Confidence 676665
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.25 E-value=0.00025 Score=60.70 Aligned_cols=188 Identities=10% Similarity=0.025 Sum_probs=111.6
Q ss_pred CeEEEEECCC--CCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeC----C-eEEEEeCCC
Q psy11524 124 LILKVAWCSS--TDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSY----N-TLRLCDKVG 196 (323)
Q Consensus 124 ~v~~~~~~~~--~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~----~-~i~i~d~~~ 196 (323)
....++|+|+ +..|+.+...+.|+ .+|+.+..+..+.........++++++|+++++... . .+...+..+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~---~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFR---HVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRAS 216 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEE---EEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGG
T ss_pred CCceEEEccccCCCEEEEEeCCCCEE---EEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCC
Confidence 4568999984 44555555447788 999976777766665667899999999994444331 1 244444332
Q ss_pred Cee--eecCCCCccEEEEEEcC-CCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEe
Q psy11524 197 WSH--SLDKPDTGSVYDLVWSN-DATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFID 272 (323)
Q Consensus 197 ~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~ 272 (323)
... .... .......++++| +|.+.++-..++ |+.+|..++.....+...+.......++|+|++ +.|.+.+
T Consensus 217 ~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG----~~LYvad 291 (433)
T 4hw6_A 217 GFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTG----DWAYIIY 291 (433)
T ss_dssp TTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTS----SEEEEEE
T ss_pred Ceecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCC----CEEEEEe
Confidence 111 1111 223467788999 666555555566 999998877652221011222233479999998 6677776
Q ss_pred CC-CCeEEEeccc--ccC----------C--C---------CccceeEEEE---------eeCCCeeEeeecCCeEEEEE
Q psy11524 273 KN-RDLYLSMWSH--SLD----------K--P---------DTGSVYDLVW---------SSDATQIAGACANGSLLLGT 319 (323)
Q Consensus 273 ~~-~~~~~~~~~~--~~~----------~--~---------~~~~v~~~~~---------s~~g~~l~s~~~dg~i~~~~ 319 (323)
.. ..+..++... ... . + .-.....+++ .++|.++++-...++|+.++
T Consensus 292 ~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~ 371 (433)
T 4hw6_A 292 NGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLT 371 (433)
T ss_dssp TTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEEC
T ss_pred CCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEEC
Confidence 54 3344444321 000 0 0 0123567888 67777776666677777664
No 273
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.25 E-value=0.00025 Score=59.42 Aligned_cols=141 Identities=10% Similarity=0.020 Sum_probs=80.3
Q ss_pred CCeEEEEeeCCeEEEEeCCCCc-ee-Eeecc---------CCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeee
Q psy11524 93 SNKVLLTQAKSLVIKPLSPNNK-AT-KWQAH---------DGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLY 160 (323)
Q Consensus 93 ~~~l~~~~~~~~~v~~~~~~~~-~~-~~~~~---------~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~ 160 (323)
+..+++++.+ +.|+.+|..+. .. ..... ...+.+. ...++..+++++.++.+. .+|.+ ++.+.
T Consensus 53 ~~~v~~~~~~-g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~---a~d~~tG~~~W 127 (376)
T 3q7m_A 53 DNVVYAADRA-GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVY---ALNTSDGTVAW 127 (376)
T ss_dssp TTEEEEECTT-SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEE---EEETTTCCEEE
T ss_pred CCEEEEEcCC-CeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEE---EEECCCCCEEE
Confidence 5566666555 57888887544 21 22211 1222221 112456777888899999 99985 77766
Q ss_pred EeecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCCCCeee-ecCCCCccE------EEEEEcCCCCEEEEEecCc-EEE
Q psy11524 161 SSLTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHS-LDKPDTGSV------YDLVWSNDATQIAGACANV-IHI 231 (323)
Q Consensus 161 ~~~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~-~~~~~~~~v------~~~~~~~~~~~l~~~~~d~-i~i 231 (323)
............... +..+++++.+ .+..+|..+.... ... ....+ ...... +..++.++.++ +..
T Consensus 128 ~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~-~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~ 202 (376)
T 3q7m_A 128 QTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVN-LDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSA 202 (376)
T ss_dssp EEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEE-CCC-----CCCCCCEEE--TTEEEECCTTTEEEE
T ss_pred EEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEe-CCCCceeecCCCCcEEE--CCEEEEEcCCCEEEE
Confidence 665433222222332 3466666664 8999998644332 222 11111 112222 34677788888 999
Q ss_pred EEcCCCceeeee
Q psy11524 232 FDISSSSSSNVT 243 (323)
Q Consensus 232 wd~~~~~~~~~~ 243 (323)
+|..+|+.+...
T Consensus 203 ~d~~tG~~~w~~ 214 (376)
T 3q7m_A 203 VLMEQGQMIWQQ 214 (376)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCcEEEEE
Confidence 999999887653
No 274
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.24 E-value=0.0013 Score=54.01 Aligned_cols=221 Identities=12% Similarity=0.049 Sum_probs=121.7
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEee---ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQ---AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD- 155 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~- 155 (323)
...+.++.|+| +. +++++... .|+.-...++ -.... .+.+.+..+.+.+++..++++. ++.+. . ..+
T Consensus 79 ~~~~~~i~~~~-~~-~~~~g~~g-~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~---~-S~Dg 150 (327)
T 2xbg_A 79 DYRFNSVSFQG-NE-GWIVGEPP-IMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITN-VGAIY---R-TKDS 150 (327)
T ss_dssp CCEEEEEEEET-TE-EEEEEETT-EEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEET-TCCEE---E-ESST
T ss_pred CccEEEEEecC-Ce-EEEEECCC-eEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeC-CccEE---E-EcCC
Confidence 44689999986 44 44445553 4444333232 11111 2345677888877776666554 55443 2 222
Q ss_pred CCeeeEe-ecCCCceeEEEEecCCCEEEEEeCC-eEEEEeCC--CCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EE
Q psy11524 156 GRQLYSS-LTHDHPISSLAWAPGGDMFAVGSYN-TLRLCDKV--GWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IH 230 (323)
Q Consensus 156 ~~~~~~~-~~~~~~v~~~~~~p~~~~l~~~~~~-~i~i~d~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~ 230 (323)
++.-... ......+..+++.|++.+++++..+ ..+-.|-. ..... .......+..+.+.+++..+ ..+.++ ++
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~ 228 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH-NRTTSRRLHNMGFTPDGRLW-MIVNGGKIA 228 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE-ECCSSSCEEEEEECTTSCEE-EEETTTEEE
T ss_pred CCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC-CCCCCCccceeEECCCCCEE-EEeCCceEE
Confidence 2222222 2344578899999999888777666 44445542 22222 22345678899999988755 455677 77
Q ss_pred EEEcCCCceeeeecCC--CCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-----cC--CCCccceeEEEEee
Q psy11524 231 IFDISSSSSSNVTAPL--SHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-----LD--KPDTGSVYDLVWSS 301 (323)
Q Consensus 231 iwd~~~~~~~~~~~~~--~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-----~~--~~~~~~v~~~~~s~ 301 (323)
+.+...++.-...... .....+..+++.+++ .+.+...++.+.. ....+ +. ......+.++.|.+
T Consensus 229 ~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~-----~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~v~~~~ 302 (327)
T 2xbg_A 229 FSDPDNSENWGELLSPLRRNSVGFLDLAYRTPN-----EVWLAGGAGALLC-SQDGGQTWQQDVDVKKVPSNFYKILFFS 302 (327)
T ss_dssp EEETTEEEEECCCBCTTSSCCSCEEEEEESSSS-----CEEEEESTTCEEE-ESSTTSSCEECGGGTTSSSCCCEEEEEE
T ss_pred EecCCCCCeeEeccCCcccCCcceEEEEecCCC-----EEEEEeCCCeEEE-eCCCCcccEEcCccCCCCCCeEEEEEEC
Confidence 7643323332221011 122458889998875 3444444554432 22211 11 01135678899986
Q ss_pred CCCeeEeeecCCeEEEE
Q psy11524 302 DATQIAGACANGSLLLG 318 (323)
Q Consensus 302 ~g~~l~s~~~dg~i~~~ 318 (323)
+++ ++.++.+|.|.-+
T Consensus 303 ~~~-~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 303 PDQ-GFILGQKGILLRY 318 (327)
T ss_dssp TTE-EEEECSTTEEEEE
T ss_pred CCc-eEEEcCCceEEEE
Confidence 654 6666778976654
No 275
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.21 E-value=0.0015 Score=60.19 Aligned_cols=157 Identities=10% Similarity=-0.033 Sum_probs=107.2
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc------eeEeeccCCCeEEEEECCCCCEEE-EEcCCCceEeeeEE
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK------ATKWQAHDGLILKVAWCSSTDLIL-SGGEDCKYKASFVW 152 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~i~v~ 152 (323)
....+..++|++.+..|+.+....+.|+.+++.+. ...+......+..|++.+.+..|+ +-...+.|. +.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~---v~ 498 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS---VA 498 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEE---EE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEE---EE
Confidence 45678899999988888877666667887776642 222232345567889988775554 445567888 99
Q ss_pred eCCCCeeeEeec-CCCceeEEEEecCCCEEEEEeC---CeEEEEeCCCCeeee-cCCCCccEEEEEEcCCCCEEEEEecC
Q psy11524 153 DTDGRQLYSSLT-HDHPISSLAWAPGGDMFAVGSY---NTLRLCDKVGWSHSL-DKPDTGSVYDLVWSNDATQIAGACAN 227 (323)
Q Consensus 153 d~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~~~~~---~~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d 227 (323)
++++.....+.. .......|+++|.+..|+.+.. ..|...++.+..... ....-.....|++++.+..|+.+...
T Consensus 499 ~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~ 578 (791)
T 3m0c_C 499 DTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 578 (791)
T ss_dssp ETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred eCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC
Confidence 998776655543 3456889999998666666654 378889988765443 33334578999999877777776554
Q ss_pred c--EEEEEcCCCce
Q psy11524 228 V--IHIFDISSSSS 239 (323)
Q Consensus 228 ~--i~iwd~~~~~~ 239 (323)
. |..+++.....
T Consensus 579 ~~~I~~~d~dG~~~ 592 (791)
T 3m0c_C 579 LHSISSIDVNGGNR 592 (791)
T ss_dssp TTEEEEEETTSCSC
T ss_pred CCcEEEEecCCCce
Confidence 4 99999865433
No 276
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.17 E-value=0.002 Score=53.51 Aligned_cols=219 Identities=11% Similarity=0.047 Sum_probs=115.2
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEee------ccCCCeEEEEECCC---CCEEEEEcC----C----
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKWQ------AHDGLILKVAWCSS---TDLILSGGE----D---- 143 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~~------~~~~~v~~~~~~~~---~~~l~~~~~----d---- 143 (323)
-.....|+|.|+|+.++ +... +.|++++..+. ..+. ........++++|+ +..|+.+.. +
T Consensus 28 l~~P~~ia~~pdG~l~V-~e~~-g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLV-TERP-GRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CSCEEEEEEEETTEEEE-EETT-TEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCCCeEEEEcCCCeEEE-EeCC-CEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 45678999999998554 4344 68888875543 2221 12356889999997 445544432 2
Q ss_pred CceEeeeEEeCCCC--e---eeE----eec-CCCceeEEEEecCCCEEEEEeC--------------CeEEEEeCCCCe-
Q psy11524 144 CKYKASFVWDTDGR--Q---LYS----SLT-HDHPISSLAWAPGGDMFAVGSY--------------NTLRLCDKVGWS- 198 (323)
Q Consensus 144 ~~i~~i~v~d~~~~--~---~~~----~~~-~~~~v~~~~~~p~~~~l~~~~~--------------~~i~i~d~~~~~- 198 (323)
..|. .++.++. . ... +.. .......++|.|||.++++.+. +.|.-++..+..
T Consensus 105 ~~v~---r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p 181 (354)
T 3a9g_A 105 NRVI---RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPP 181 (354)
T ss_dssp EEEE---EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCC
T ss_pred eEEE---EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCC
Confidence 4555 7776543 1 111 221 1123467999999987666432 245555554420
Q ss_pred --------eeecCCCCccEEEEEEcC-CCCEEEEEecC-c---EEEEEcCCCc------------------eeeeecCCC
Q psy11524 199 --------HSLDKPDTGSVYDLVWSN-DATQIAGACAN-V---IHIFDISSSS------------------SSNVTAPLS 247 (323)
Q Consensus 199 --------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d-~---i~iwd~~~~~------------------~~~~~~~~~ 247 (323)
.....++ .....++|+| +|++.++-... . |.+.. .+. ++.. +..
T Consensus 182 ~~npf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~--~~~ 256 (354)
T 3a9g_A 182 ADNPFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVID--TGS 256 (354)
T ss_dssp TTSSSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEE--CTT
T ss_pred CCCCCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEee--cCC
Confidence 1111222 2356899999 66655443322 1 33332 221 1111 211
Q ss_pred CccceEEEEEccCCC--CccceEEEEeCCC-CeEEEecccc--------cCCCCccceeEEEEeeCCCeeEeee
Q psy11524 248 HSHEITQLAVNQTGS--LQERHVAFIDKNR-DLYLSMWSHS--------LDKPDTGSVYDLVWSSDATQIAGAC 310 (323)
Q Consensus 248 ~~~~v~~~~~~p~g~--~~d~~l~~~~~~~-~~~~~~~~~~--------~~~~~~~~v~~~~~s~~g~~l~s~~ 310 (323)
.......++|..... ..++.+.+.+..+ .+....+... +.......+..+++.|||.++++..
T Consensus 257 ~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 257 ETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 223567778853221 1224555555443 2333333310 1211135789999999997666554
No 277
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.13 E-value=0.0005 Score=55.65 Aligned_cols=193 Identities=8% Similarity=-0.029 Sum_probs=112.3
Q ss_pred cCCCCeEEEEee-CCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEEEEcCCC--------------ceEeeeEEe
Q psy11524 90 SPDSNKVLLTQA-KSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLILSGGEDC--------------KYKASFVWD 153 (323)
Q Consensus 90 sp~~~~l~~~~~-~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------------~i~~i~v~d 153 (323)
+++|.+|++... ++..|+..+..+. ...+.... +--++++|.+|+.+.... .|+ ..+
T Consensus 22 ~~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~----~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy---~i~ 94 (302)
T 3s25_A 22 CESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDT----AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLC---RIK 94 (302)
T ss_dssp EEETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEE----EEEEEECSSEEEEEEECC------CCSSCCSEEEE---EEE
T ss_pred EEeCCEEEEEeCCCCceEEEEcCCCCCCEEccCCc----eeeEEEcCCEEEEEECCCCcccccceeccCCCeEE---EEe
Confidence 457888887752 3457777776654 44443321 234578898888776532 344 777
Q ss_pred CCCCeeeEeecCCCceeEEEEecCCCEEEEEe---C-C-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecC-
Q psy11524 154 TDGRQLYSSLTHDHPISSLAWAPGGDMFAVGS---Y-N-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACAN- 227 (323)
Q Consensus 154 ~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~---~-~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d- 227 (323)
+++.....+.... ...|+++++.|+... . + .|+..++.+.....+..+.. ..++|+++.|+-.+.+
T Consensus 95 ~dg~~~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~ 166 (302)
T 3s25_A 95 RNGHGSTVLDPDP----CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKN 166 (302)
T ss_dssp TTSCCCEEEECSC----EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTT
T ss_pred CCCCcceEeecCC----ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCC
Confidence 7766655554332 236788899988877 3 3 78888888654444433322 3567888888877663
Q ss_pred c-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCC--CeEEEecccc-cCCCCccceeEEEEeeCC
Q psy11524 228 V-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNR--DLYLSMWSHS-LDKPDTGSVYDLVWSSDA 303 (323)
Q Consensus 228 ~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~--~~~~~~~~~~-~~~~~~~~v~~~~~s~~g 303 (323)
. |...++..+..... +.+ ... ..+.|++ +.|...+... .+...++... ....-...+ ..|+|++
T Consensus 167 ~~Iy~~~l~g~~~~~l--~~~---~~~-~~~~P~g----~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~~~--~~~~~~g 234 (302)
T 3s25_A 167 GQLYRYDTASQSEALF--YDC---NCY-KPVVLDD----TNVYYMDVNRDNAIVHVNINNPNPVVLTEANI--EHYNVYG 234 (302)
T ss_dssp CCEEEEETTTTEEEEE--ECS---CEE-EEEEEET----TEEEEEEGGGTTEEEEECSSSCCCEECSCSCE--EEEEEET
T ss_pred ceEEEEECCCCCEEEE--eCC---Ccc-ceeeecC----CEEEEEEcCCCcEEEEEECCCCCeEEEeCCCc--ceEEECC
Confidence 4 88888776654432 222 222 2356887 6665544433 2333333332 000111222 3478888
Q ss_pred CeeEee
Q psy11524 304 TQIAGA 309 (323)
Q Consensus 304 ~~l~s~ 309 (323)
+.|+-+
T Consensus 235 ~~Iy~~ 240 (302)
T 3s25_A 235 SLIFYQ 240 (302)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 877754
No 278
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.12 E-value=0.00039 Score=56.36 Aligned_cols=157 Identities=8% Similarity=0.087 Sum_probs=100.6
Q ss_pred ecCCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCCC-eeeecCCC-------CccEEEEEE---cCCCCEEEEEec---
Q psy11524 163 LTHDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGW-SHSLDKPD-------TGSVYDLVW---SNDATQIAGACA--- 226 (323)
Q Consensus 163 ~~~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~-~~~~~~~~-------~~~v~~~~~---~~~~~~l~~~~~--- 226 (323)
........+++|++....|..++. . +|..||..+. ........ ...+..+.| .|+++++++...
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~a 88 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKS 88 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTT
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccc
Confidence 334445668899987777777775 4 9999998743 22222221 114689999 688877775432
Q ss_pred ----------Cc-EEEEEcC---CCceeeeecCCC-----------CccceEEEEEccCCC-----Ccc-ceEEEEeCCC
Q psy11524 227 ----------NV-IHIFDIS---SSSSSNVTAPLS-----------HSHEITQLAVNQTGS-----LQE-RHVAFIDKNR 275 (323)
Q Consensus 227 ----------d~-i~iwd~~---~~~~~~~~~~~~-----------~~~~v~~~~~~p~g~-----~~d-~~l~~~~~~~ 275 (323)
+. +..||+. +++.+....+.. .......++..++|+ +.. ..|.-.+.+|
T Consensus 89 f~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG 168 (334)
T 2p9w_A 89 FNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG 168 (334)
T ss_dssp TCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS
T ss_pred ccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC
Confidence 56 9999999 777765432221 113578999999986 222 4445555555
Q ss_pred C-eEEEecccccCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 276 D-LYLSMWSHSLDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 276 ~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
. +..|..... ........+.++++|+|+.|+.....|.+..+++
T Consensus 169 ~~~~~~~~~~~-~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~ 213 (334)
T 2p9w_A 169 KTVSTFAWESG-NGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDV 213 (334)
T ss_dssp CCEEEEEECCC-CSSSCCSCSEEEEETTTTEEEEESSSSSEEEEEC
T ss_pred CEEeeeeecCC-CcccccCcceEEEeCCCCEEEEEcCCCeEEEEcC
Confidence 4 334443321 1111334679999999998888777998888775
No 279
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.10 E-value=0.0059 Score=56.24 Aligned_cols=177 Identities=7% Similarity=-0.076 Sum_probs=109.8
Q ss_pred eEEEEeeCCeEEEEeCCCCc-eeEeeccCCCeEEEEECCCCCEEE-EEcCCCceEeeeEEeCCCC-----eeeEeecCCC
Q psy11524 95 KVLLTQAKSLVIKPLSPNNK-ATKWQAHDGLILKVAWCSSTDLIL-SGGEDCKYKASFVWDTDGR-----QLYSSLTHDH 167 (323)
Q Consensus 95 ~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~i~v~d~~~~-----~~~~~~~~~~ 167 (323)
+|+++... .|+..++... ...+......+..++|.+.+..|+ +-...+.|+ .+++++. ....+.....
T Consensus 397 ~Ll~an~~--~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~---~~~l~g~~~~~~~~~vi~~~l~ 471 (791)
T 3m0c_C 397 YLFFTNRH--EVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMIC---STQLDRAHGVSSYDTVISRDIQ 471 (791)
T ss_dssp EEEEECBS--SEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEE---EEEC--------CEEEECSSCS
T ss_pred cccccccc--ceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEE---EEeccCCCCCcceeEEEecCCC
Confidence 55555443 4555565544 334444556778999998655554 444567787 8888652 2223333445
Q ss_pred ceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeeee-cCCCCccEEEEEEcCCCCEEEEEec-C-c-EEEEEcCCCceee
Q psy11524 168 PISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHSL-DKPDTGSVYDLVWSNDATQIAGACA-N-V-IHIFDISSSSSSN 241 (323)
Q Consensus 168 ~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~-d-~-i~iwd~~~~~~~~ 241 (323)
....|++.+.+..|+.+.. . .|.+.++.+..... ..........|+++|.+.+|+.... . . |...++.......
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~ 551 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 551 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEE
Confidence 6788999998877777766 4 99999998764443 3334456899999997666665543 3 5 8888876544333
Q ss_pred eecCCCCccceEEEEEccCCCCccceEEEEeCCC-CeEEEec
Q psy11524 242 VTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNR-DLYLSMW 282 (323)
Q Consensus 242 ~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~-~~~~~~~ 282 (323)
. +.........|++++.+ +.|.+.+... .+...++
T Consensus 552 l--v~~~l~~P~GLavD~~~----~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 552 L--VTENIQWPNGITLDLLS----GRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp E--ECSSCSCEEEEEEETTT----TEEEEEETTTTEEEEEET
T ss_pred E--EeCCCCCceEEEEecCC----CeEEEEeCCCCcEEEEec
Confidence 2 33344578899999876 6666666443 3444444
No 280
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.10 E-value=0.0049 Score=55.24 Aligned_cols=155 Identities=9% Similarity=-0.094 Sum_probs=102.9
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCce-eEee-ccCCCeEEEEECCCCCEEEEEcC--CCceEeeeEEeCCCC
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKA-TKWQ-AHDGLILKVAWCSSTDLILSGGE--DCKYKASFVWDTDGR 157 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~i~v~d~~~~ 157 (323)
.....+++.+.+..|+.+....+.|.+.+..+.. ..+. ..-.....|++.|.+..|+.+.. .+.|. ..++++.
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~---r~~~dG~ 160 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIE---RAGMDGS 160 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEE---EEETTSC
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEE---EEECCCC
Confidence 5788999999888888887766789999888763 3332 34455778999997665655543 35666 7788776
Q ss_pred eeeEee-cCCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeeeecCC-CCccEEEEEEcCCCCEEEEEec-Cc-EEE
Q psy11524 158 QLYSSL-THDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHSLDKP-DTGSVYDLVWSNDATQIAGACA-NV-IHI 231 (323)
Q Consensus 158 ~~~~~~-~~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d~-i~i 231 (323)
....+. ..-.....+++++++..|+.+.. . .|..+|+.+........ .......+++..+ .|+.+.. .+ |..
T Consensus 161 ~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~ 238 (619)
T 3s94_A 161 SRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILA 238 (619)
T ss_dssp SCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEE
T ss_pred ceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEE
Confidence 555543 23456789999998777777776 3 89999998764443321 2233456777655 4555543 44 988
Q ss_pred EEcCCCceee
Q psy11524 232 FDISSSSSSN 241 (323)
Q Consensus 232 wd~~~~~~~~ 241 (323)
.|..+++...
T Consensus 239 ~d~~tg~~~~ 248 (619)
T 3s94_A 239 CNKYTGEGLR 248 (619)
T ss_dssp EESSSCCCCE
T ss_pred EECCCCcccE
Confidence 8987775443
No 281
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.09 E-value=0.00067 Score=56.77 Aligned_cols=209 Identities=12% Similarity=0.064 Sum_probs=109.4
Q ss_pred CCCeEEEEeeCCeEEEEeCCCCc-e-eEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeC-CCCeeeEeecCCCc
Q psy11524 92 DSNKVLLTQAKSLVIKPLSPNNK-A-TKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDT-DGRQLYSSLTHDHP 168 (323)
Q Consensus 92 ~~~~l~~~~~~~~~v~~~~~~~~-~-~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~-~~~~~~~~~~~~~~ 168 (323)
++..+++++.+ +.|+.+|..+. . ............... .+..++.++.++.+. .+|. +++.+.........
T Consensus 102 ~~~~v~v~~~~-g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~---~~d~~tG~~~W~~~~~~~~ 175 (376)
T 3q7m_A 102 SGGHVYIGSEK-AQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQ---ALNEADGAVKWTVNLDMPS 175 (376)
T ss_dssp ETTEEEEEETT-SEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEE---EEETTTCCEEEEEECCC--
T ss_pred eCCEEEEEcCC-CEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEE---EEECCCCcEEEEEeCCCCc
Confidence 35566666555 58888887654 2 222222111111122 245777888899999 9998 47766665543221
Q ss_pred e-----eEEEEecCCCEEEEEeCC-eEEEEeCCCCeee-ecCCC-C-c-----cEEEEEEcC--CCCEEEEEecCc-EEE
Q psy11524 169 I-----SSLAWAPGGDMFAVGSYN-TLRLCDKVGWSHS-LDKPD-T-G-----SVYDLVWSN--DATQIAGACANV-IHI 231 (323)
Q Consensus 169 v-----~~~~~~p~~~~l~~~~~~-~i~i~d~~~~~~~-~~~~~-~-~-----~v~~~~~~~--~~~~l~~~~~d~-i~i 231 (323)
. ...... +..++++..+ .+..+|..+.... ..... . . .+..+.-.| .+..++.++.++ +..
T Consensus 176 ~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~ 253 (376)
T 3q7m_A 176 LSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTA 253 (376)
T ss_dssp ---CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEE
T ss_pred eeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEE
Confidence 1 222222 3456666664 8999998644332 21111 0 0 000011112 245777888888 999
Q ss_pred EEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-----cCCCCccceeEEEEeeCCCee
Q psy11524 232 FDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-----LDKPDTGSVYDLVWSSDATQI 306 (323)
Q Consensus 232 wd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~s~~g~~l 306 (323)
+|.++++.+... .. .....+... + +.+.+.+.++.+..++..++ ........+..+.. .+..|
T Consensus 254 ~d~~tG~~~w~~--~~--~~~~~~~~~--~----~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l 321 (376)
T 3q7m_A 254 LDLRSGQIMWKR--EL--GSVNDFIVD--G----NRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNL 321 (376)
T ss_dssp EETTTCCEEEEE--CC--CCEEEEEEE--T----TEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEE
T ss_pred EECCCCcEEeec--cC--CCCCCceEE--C----CEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEE
Confidence 999999988763 21 123333332 2 34555555555554444332 00011112222222 34578
Q ss_pred EeeecCCeEEEEEe
Q psy11524 307 AGACANGSLLLGTI 320 (323)
Q Consensus 307 ~s~~~dg~i~~~~l 320 (323)
+.++.+|.+++++.
T Consensus 322 ~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 322 VVGDSEGYLHWINV 335 (376)
T ss_dssp EEECTTSEEEEEET
T ss_pred EEEeCCCeEEEEEC
Confidence 88888998888875
No 282
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.08 E-value=0.00058 Score=55.35 Aligned_cols=152 Identities=9% Similarity=0.083 Sum_probs=103.4
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEe--ec----cC--CCeEEEEE---CCCCCEEEEEcC-------
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKW--QA----HD--GLILKVAW---CSSTDLILSGGE------- 142 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~--~~----~~--~~v~~~~~---~~~~~~l~~~~~------- 142 (323)
-.-.+++|.+....+.+++-..+.|..|+..+. ...+ .. .. ..+..+.| .|+++++++...
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 344578898877888888766689999998744 2222 11 11 13579999 588777775431
Q ss_pred ------CCceEeeeEEeCC----CCeeeEee--c-----------CCCceeEEEEecCCCEEEEEeC--CeEEEEeCCCC
Q psy11524 143 ------DCKYKASFVWDTD----GRQLYSSL--T-----------HDHPISSLAWAPGGDMFAVGSY--NTLRLCDKVGW 197 (323)
Q Consensus 143 ------d~~i~~i~v~d~~----~~~~~~~~--~-----------~~~~v~~~~~~p~~~~l~~~~~--~~i~i~d~~~~ 197 (323)
+..+. .+|+. ++.+.... . .......++..++|+..++++. +.|..++..+.
T Consensus 93 g~~~~g~~~v~---~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 93 DQSSHGASSFH---SFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp SCCSSSCCEEE---EEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC
T ss_pred ccccCCCCEEE---EEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC
Confidence 45677 99987 55554432 1 1135889999999998887765 47777777765
Q ss_pred eeeec--C----CCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCC
Q psy11524 198 SHSLD--K----PDTGSVYDLVWSNDATQIAGACANV-IHIFDISS 236 (323)
Q Consensus 198 ~~~~~--~----~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~ 236 (323)
..... . ......+.++++|+|+.|++....+ |.-+|+..
T Consensus 170 ~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 170 TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 33321 1 1122367999999999888887778 99999884
No 283
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.07 E-value=0.00045 Score=62.63 Aligned_cols=219 Identities=12% Similarity=0.042 Sum_probs=123.9
Q ss_pred CCeEEEEeeCCeEEEEeCCCCc--eeEeeccC-CCeEEEEECC--CCCEEEEEcC------CCceEeeeEEeC-CCCeee
Q psy11524 93 SNKVLLTQAKSLVIKPLSPNNK--ATKWQAHD-GLILKVAWCS--STDLILSGGE------DCKYKASFVWDT-DGRQLY 160 (323)
Q Consensus 93 ~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~-~~v~~~~~~~--~~~~l~~~~~------d~~i~~i~v~d~-~~~~~~ 160 (323)
+..+++++.+ +.|+.+|..+. +-.+.... .....+.-+| .+..++++.. +|.|. .+|. +++.+.
T Consensus 117 ~~~v~v~~~d-g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~---a~D~~tG~~~W 192 (668)
T 1kv9_A 117 GDKVYVGTLD-GRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVS---AYDADTGKLAW 192 (668)
T ss_dssp BTEEEEECTT-SEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEE---EEETTTCCEEE
T ss_pred CCEEEEEcCC-CEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEE---EEECCCCcEEE
Confidence 4566666555 58888887654 22222110 0000001111 1334555543 47888 9998 477776
Q ss_pred EeecCC-------------------------------CceeEEEEecCCCEEEEEeCC-e-------------------E
Q psy11524 161 SSLTHD-------------------------------HPISSLAWAPGGDMFAVGSYN-T-------------------L 189 (323)
Q Consensus 161 ~~~~~~-------------------------------~~v~~~~~~p~~~~l~~~~~~-~-------------------i 189 (323)
.+.... .....++++|+...++.++.+ . |
T Consensus 193 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v 272 (668)
T 1kv9_A 193 RFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSI 272 (668)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred EecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeE
Confidence 664211 011246888887788777653 3 8
Q ss_pred EEEeCCCCeee-ec--CCCC-------ccEEEEEEcCCCC---EEEEEecCc-EEEEEcCCCceeeeecCCCC-------
Q psy11524 190 RLCDKVGWSHS-LD--KPDT-------GSVYDLVWSNDAT---QIAGACANV-IHIFDISSSSSSNVTAPLSH------- 248 (323)
Q Consensus 190 ~i~d~~~~~~~-~~--~~~~-------~~v~~~~~~~~~~---~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~------- 248 (323)
..+|.++.+.. .. ..|. .+.....+..+|+ .++.++.++ ++++|.++|+.+....+...
T Consensus 273 ~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d 352 (668)
T 1kv9_A 273 LAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVD 352 (668)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEEC
T ss_pred EEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccc
Confidence 89998754433 21 1122 2233333334665 688888999 99999999998743211110
Q ss_pred ---ccce------------------------EEEEEccCCC---------------------------------------
Q psy11524 249 ---SHEI------------------------TQLAVNQTGS--------------------------------------- 262 (323)
Q Consensus 249 ---~~~v------------------------~~~~~~p~g~--------------------------------------- 262 (323)
..++ ..++++|+..
T Consensus 353 ~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p 432 (668)
T 1kv9_A 353 LATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVP 432 (668)
T ss_dssp TTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCC
T ss_pred cccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCC
Confidence 0000 0134444321
Q ss_pred --CccceEEEEeCCCCeEEEecccccCCCCccceeEEEEeeCCCeeEeeecCCeEEEEEee
Q psy11524 263 --LQERHVAFIDKNRDLYLSMWSHSLDKPDTGSVYDLVWSSDATQIAGACANGSLLLGTII 321 (323)
Q Consensus 263 --~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~ 321 (323)
..++.|..+|......+|.... ........+...+.+++.++.||.++.|+..
T Consensus 433 ~~~~~g~l~A~D~~tG~~~W~~~~------~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 433 AAVVSGALLAWDPVKQKAAWKVPY------PTHWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp GGGCEEEEEEEETTTTEEEEEEEE------SSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CCCccceEEEEeCCCCcEEEEccC------CCCCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 0125677788777777787765 3333444455678889999999999999853
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.07 E-value=0.00023 Score=60.88 Aligned_cols=150 Identities=7% Similarity=0.061 Sum_probs=95.6
Q ss_pred CeEEEEECC-CCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeC-----C-eEEEEeCCC
Q psy11524 124 LILKVAWCS-STDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-----N-TLRLCDKVG 196 (323)
Q Consensus 124 ~v~~~~~~~-~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-----~-~i~i~d~~~ 196 (323)
....++++| ++..|+++...+.|+ .+|+++..+..+.........++|+++|+.|+++.. . .+..++..+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~---~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTR---LIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEE---EEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEE---EEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC
Confidence 457889998 455666666556777 999988777777666667889999999996666654 2 344455443
Q ss_pred Cee--eecCCCCccEEEEEEcC-CCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEe
Q psy11524 197 WSH--SLDKPDTGSVYDLVWSN-DATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFID 272 (323)
Q Consensus 197 ~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~ 272 (323)
... ..+. .......++++| +|.++++-..++ |..++...+...... ..........++|+|++ +.|.+.+
T Consensus 215 ~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~-~~~~~~~P~gia~~pdG----~~lyv~d 288 (430)
T 3tc9_A 215 GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF-TIQDSGWEFHIQFHPSG----NYAYIVV 288 (430)
T ss_dssp TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE-ECSSSSCCEEEEECTTS----SEEEEEE
T ss_pred ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-EcCCCCcceeEEEcCCC----CEEEEEE
Confidence 211 1111 123467788999 666555555566 999998876542221 12223456789999998 6566665
Q ss_pred CC-CCeEEEec
Q psy11524 273 KN-RDLYLSMW 282 (323)
Q Consensus 273 ~~-~~~~~~~~ 282 (323)
.. ..+..++.
T Consensus 289 ~~~~~I~~~~~ 299 (430)
T 3tc9_A 289 VNQHYILRSDY 299 (430)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCEEEEEeC
Confidence 43 33444443
No 285
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.05 E-value=0.0041 Score=55.82 Aligned_cols=155 Identities=8% Similarity=-0.068 Sum_probs=107.0
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEee-ccCCCeEEEEECCCCCEEEEEcC--CCceEeeeEEeCCCC
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQ-AHDGLILKVAWCSSTDLILSGGE--DCKYKASFVWDTDGR 157 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~i~v~d~~~~ 157 (323)
.....+++.+.+..|+.+....+.|.+.++.+. ...+. ..-.....+++.|....|+.... .+.|. ..++++.
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~---r~~~dG~ 156 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKID---RAAMDGS 156 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEE---EEETTSC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEE---EEeCCCC
Confidence 457789999888888887766678998888766 22332 34456789999996555655542 46677 8888877
Q ss_pred eeeEeecCCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEec-Cc-EEEEE
Q psy11524 158 QLYSSLTHDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACA-NV-IHIFD 233 (323)
Q Consensus 158 ~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-d~-i~iwd 233 (323)
....+...-.....+++++++..|+.+.. . .|..+|+.+.....+.........+++.. + .|+.+.. .+ |...|
T Consensus 157 ~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~~P~glav~~-~-~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 157 ERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLPHPFGLTQYQ-D-YIYWTDWSRRSIERAN 234 (628)
T ss_dssp SCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCSCEEEEEEET-T-EEEEEETTTTEEEEEE
T ss_pred ceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCceEEeeccCCCceEEEEEC-C-EEEEecCCCCEEEEEE
Confidence 66665555567889999998888887776 3 99999988653343333334566788765 3 4554444 55 98888
Q ss_pred cCCCceee
Q psy11524 234 ISSSSSSN 241 (323)
Q Consensus 234 ~~~~~~~~ 241 (323)
..+++...
T Consensus 235 k~tg~~~~ 242 (628)
T 4a0p_A 235 KTSGQNRT 242 (628)
T ss_dssp TTTCCSCE
T ss_pred CCCCCceE
Confidence 77665443
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.05 E-value=0.0061 Score=54.75 Aligned_cols=155 Identities=10% Similarity=0.022 Sum_probs=107.6
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEe-eccCCCeEEEEECCCCCEE-EEEcCCCceEeeeEEeCCCC
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKW-QAHDGLILKVAWCSSTDLI-LSGGEDCKYKASFVWDTDGR 157 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~-~~~~~~v~~~~~~~~~~~l-~~~~~d~~i~~i~v~d~~~~ 157 (323)
-..+..++|++.+..|+.+....+.|+.++..+. ...+ ......+..+++.+.+..| .+-...+.|. +.++++.
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~---v~~~dG~ 112 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIE---VSKLDGQ 112 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEE---EEETTST
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEE---EEecCCC
Confidence 4568899999988888888766678888877654 3332 2222456788888765555 4444567888 9999876
Q ss_pred eeeEee-cCCCceeEEEEecCCCEEEEEeC---CeEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc--EEE
Q psy11524 158 QLYSSL-THDHPISSLAWAPGGDMFAVGSY---NTLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV--IHI 231 (323)
Q Consensus 158 ~~~~~~-~~~~~v~~~~~~p~~~~l~~~~~---~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--i~i 231 (323)
....+. ..-.....++++|....|+.... +.|...++.+.....+...-.....++++++++.|+.+.... |..
T Consensus 113 ~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~ 192 (628)
T 4a0p_A 113 HRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIES 192 (628)
T ss_dssp TCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred cEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEE
Confidence 554443 34456789999996556666553 388888888764443333456789999999877777776544 999
Q ss_pred EEcCCCc
Q psy11524 232 FDISSSS 238 (323)
Q Consensus 232 wd~~~~~ 238 (323)
+|+....
T Consensus 193 ~d~dG~~ 199 (628)
T 4a0p_A 193 SNMLGLN 199 (628)
T ss_dssp EETTSCS
T ss_pred EcCCCCc
Confidence 9986543
No 287
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.02 E-value=0.00033 Score=63.50 Aligned_cols=112 Identities=14% Similarity=0.227 Sum_probs=70.7
Q ss_pred EEEEcC-CCCeEEEEeeCC----------eEEEEeCCCCc----eeEeec-cCCCeEEEEECCCCCEEEEEcC-CCceEe
Q psy11524 86 SAAWSP-DSNKVLLTQAKS----------LVIKPLSPNNK----ATKWQA-HDGLILKVAWCSSTDLILSGGE-DCKYKA 148 (323)
Q Consensus 86 ~~~~sp-~~~~l~~~~~~~----------~~v~~~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-d~~i~~ 148 (323)
++++.| +++.+++|+.+. ..+.+||.... +..+.. +.....++++.+++++++.|+. +..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~- 268 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS- 268 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE-
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE-
Confidence 566777 888888876432 26888988765 222221 2333445778889999999985 45677
Q ss_pred eeEEeCCCCeeeEeecC--CCceeEEEEecCCCEEEEEeC-------CeEEEEeCCCCeee
Q psy11524 149 SFVWDTDGRQLYSSLTH--DHPISSLAWAPGGDMFAVGSY-------NTLRLCDKVGWSHS 200 (323)
Q Consensus 149 i~v~d~~~~~~~~~~~~--~~~v~~~~~~p~~~~l~~~~~-------~~i~i~d~~~~~~~ 200 (323)
+||.....-..+... ...-.+++..++|++++.|+. +.+.+||.....-.
T Consensus 269 --~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 269 --LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp --EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred --EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence 999864443333221 111234566678999999883 25899998765433
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.02 E-value=0.002 Score=52.68 Aligned_cols=176 Identities=11% Similarity=0.115 Sum_probs=111.0
Q ss_pred CCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecC----CCE--EEEEe--C--C-eEEEEeC--CCCeee
Q psy11524 134 TDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPG----GDM--FAVGS--Y--N-TLRLCDK--VGWSHS 200 (323)
Q Consensus 134 ~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~----~~~--l~~~~--~--~-~i~i~d~--~~~~~~ 200 (323)
..+++...+.+.+. +||++++.+..+.. +.++.+..-|+ |+. ++.++ . + +|.+|++ ....+.
T Consensus 40 ~s~ii~t~k~~gL~---Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 40 NSKLITTNKKSGLV---VYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp GCEEEEEETTTEEE---EEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred ccEEEEEcCCCCEE---EEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 35666667778888 99999999988754 56777777663 332 33332 3 3 8999976 343444
Q ss_pred ecCC------CC-ccEEEEEE--cCC-CC-EEEEEecCc-EEEEEcC---C----CceeeeecCCCCccceEEEEEccCC
Q psy11524 201 LDKP------DT-GSVYDLVW--SND-AT-QIAGACANV-IHIFDIS---S----SSSSNVTAPLSHSHEITQLAVNQTG 261 (323)
Q Consensus 201 ~~~~------~~-~~v~~~~~--~~~-~~-~l~~~~~d~-i~iwd~~---~----~~~~~~~~~~~~~~~v~~~~~~p~g 261 (323)
.... .. ..+..+++ +|. ++ ++++...++ +..|++. . .+.++++ . ....+..+...+..
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f--~-lgsq~EgcvvDd~~ 191 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF--K-MNSQTEGMAADDEY 191 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE--E-CSSCEEEEEEETTT
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe--c-CCCCcceEEEcCCC
Confidence 3321 11 55777888 774 54 677778888 9888872 2 3445553 2 23467788888877
Q ss_pred CCccceEEEEeCCCCeEEEecccc---------cC-CCC-ccceeEEEE--eeCCC-eeEeee-cCCeEEEEEee
Q psy11524 262 SLQERHVAFIDKNRDLYLSMWSHS---------LD-KPD-TGSVYDLVW--SSDAT-QIAGAC-ANGSLLLGTII 321 (323)
Q Consensus 262 ~~~d~~l~~~~~~~~~~~~~~~~~---------~~-~~~-~~~v~~~~~--s~~g~-~l~s~~-~dg~i~~~~l~ 321 (323)
+.|.+...+..+..++.... .. ..+ ...+..|++ .++|+ +|++++ .+.+..+|+..
T Consensus 192 ----g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 192 ----GRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp ----TEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred ----CeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 88999888865444443211 11 111 246788888 45555 565555 56788888763
No 289
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.97 E-value=0.0052 Score=50.95 Aligned_cols=99 Identities=11% Similarity=0.153 Sum_probs=59.1
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEe---e---ccCCCeEEEEECCC---CCEEEEEcC-C-----Cc
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKW---Q---AHDGLILKVAWCSS---TDLILSGGE-D-----CK 145 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~---~---~~~~~v~~~~~~~~---~~~l~~~~~-d-----~~ 145 (323)
-.....|+|.|+|+.++ +... +.|+.++ .+....+ . ........++|+|+ +..|+.+.. . +.
T Consensus 30 l~~P~~ia~~pdG~l~V-~e~~-g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLI-AERP-GRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEE-EETT-TEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEE-EeCC-CeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 45678999999998554 4334 6888887 3332211 1 12356889999998 555554433 2 45
Q ss_pred eEeeeEEeCCCCee------e-Eee---cCCCceeEEEEecCCCEEEEEe
Q psy11524 146 YKASFVWDTDGRQL------Y-SSL---THDHPISSLAWAPGGDMFAVGS 185 (323)
Q Consensus 146 i~~i~v~d~~~~~~------~-~~~---~~~~~v~~~~~~p~~~~l~~~~ 185 (323)
|. .++.++..+ . .+. ........++|.|||.++++.+
T Consensus 107 v~---r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VV---RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EE---EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EE---EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 66 777754211 1 122 1112346899999997766643
No 290
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.96 E-value=0.0052 Score=55.09 Aligned_cols=156 Identities=11% Similarity=0.007 Sum_probs=105.9
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeE-eeccCCCeEEEEECCCCCEEE-EEcCCCceEeeeEEeCC
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATK-WQAHDGLILKVAWCSSTDLIL-SGGEDCKYKASFVWDTD 155 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~-~~~~~~~v~~~~~~~~~~~l~-~~~~d~~i~~i~v~d~~ 155 (323)
.......++|++.+..|+.+....+.|+.++..+. ... +...-..+..+++.+.+..|+ +-...+.|. +.+++
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~---v~~~d 114 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIE---VSNLD 114 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE---EEETT
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEE---EEECC
Confidence 45668899999988888887665567887777654 122 232335788999998655444 445678888 99998
Q ss_pred CCeeeEee-cCCCceeEEEEecCCCEEEEEeC--C-eEEEEeCCCCeee-ecCCCCccEEEEEEcCCCCEEEEEecC-c-
Q psy11524 156 GRQLYSSL-THDHPISSLAWAPGGDMFAVGSY--N-TLRLCDKVGWSHS-LDKPDTGSVYDLVWSNDATQIAGACAN-V- 228 (323)
Q Consensus 156 ~~~~~~~~-~~~~~v~~~~~~p~~~~l~~~~~--~-~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d-~- 228 (323)
+.....+. ........++++|.+..|+.+.. . .|...++.+.... .....-.....++++++++.|+.+... +
T Consensus 115 G~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~ 194 (619)
T 3s94_A 115 GSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNF 194 (619)
T ss_dssp SCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCC
T ss_pred CCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCe
Confidence 77665554 34456789999997666666654 3 7777788765333 332344568999999987777766554 4
Q ss_pred EEEEEcCCCc
Q psy11524 229 IHIFDISSSS 238 (323)
Q Consensus 229 i~iwd~~~~~ 238 (323)
|..+|+....
T Consensus 195 I~~~~~dG~~ 204 (619)
T 3s94_A 195 IHKSNLDGTN 204 (619)
T ss_dssp EEEESSSCCE
T ss_pred EEEecCCCCc
Confidence 9999976543
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.91 E-value=9e-05 Score=67.49 Aligned_cols=155 Identities=8% Similarity=-0.053 Sum_probs=97.2
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCC-----ceeE-eeccCCCeEEEEECCCC-CEEEEEcCCCceEeeeEE
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNN-----KATK-WQAHDGLILKVAWCSST-DLILSGGEDCKYKASFVW 152 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~-----~~~~-~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~i~v~ 152 (323)
....+..++|++.+..|+.+....+.|+.+++.+ .... +.........|++.+.+ +++++-...+.|. +.
T Consensus 404 ~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~---v~ 480 (699)
T 1n7d_A 404 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS---VA 480 (699)
T ss_dssp CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEE---EE
T ss_pred cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEE---EE
Confidence 3455678899998888887755555677776654 1111 11122234567887644 4444445567888 99
Q ss_pred eCCCCeeeEeec-CCCceeEEEEecCCCEEEEEeC---CeEEEEeCCCCeeeec-CCCCccEEEEEEcCCCCEEEEEec-
Q psy11524 153 DTDGRQLYSSLT-HDHPISSLAWAPGGDMFAVGSY---NTLRLCDKVGWSHSLD-KPDTGSVYDLVWSNDATQIAGACA- 226 (323)
Q Consensus 153 d~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~~~~~---~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~- 226 (323)
++++.....+.. .......++++|.+..|+.+.. +.|..+++.+.....+ ...-.....++|+|++..|+.+..
T Consensus 481 d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~ 560 (699)
T 1n7d_A 481 DTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK 560 (699)
T ss_dssp BSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETT
T ss_pred ecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecC
Confidence 998766555533 2345678999997655555443 3788888776533322 223345778999998766666554
Q ss_pred Cc-EEEEEcCCC
Q psy11524 227 NV-IHIFDISSS 237 (323)
Q Consensus 227 d~-i~iwd~~~~ 237 (323)
.+ |..+|+...
T Consensus 561 ~~~I~~~d~dG~ 572 (699)
T 1n7d_A 561 LHSISSIDVNGG 572 (699)
T ss_dssp TTEEEEECSSSS
T ss_pred CCeEEEEccCCC
Confidence 44 999998643
No 292
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.90 E-value=0.0066 Score=49.75 Aligned_cols=218 Identities=13% Similarity=0.124 Sum_probs=119.0
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeE--ee--ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeC
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATK--WQ--AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDT 154 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~--~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~ 154 (323)
....+.++.|.+++..++++ .. +.|+.....++ -.. .. .....+.++.|.+ +..++ ++..+.|. . ..
T Consensus 34 ~~~~~~~v~~~~~~~~~~~G-~~-g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~g~i~---~-S~ 105 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWLVG-VN-ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWI-VGEPPIML---H-TT 105 (327)
T ss_dssp CSSCEEEEEESSSSCEEEEE-TT-TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEE-EEETTEEE---E-ES
T ss_pred CCCcEEEEEECCCCcEEEEc-CC-CeEEEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEE-EECCCeEE---E-EC
Confidence 45689999998888777744 44 45544333332 111 11 1244688899976 44444 45566554 3 33
Q ss_pred C-CCeeeEee---cCCCceeEEEEecCCCEEEEEeCCeE-EEEeC-CCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc
Q psy11524 155 D-GRQLYSSL---THDHPISSLAWAPGGDMFAVGSYNTL-RLCDK-VGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV 228 (323)
Q Consensus 155 ~-~~~~~~~~---~~~~~v~~~~~~p~~~~l~~~~~~~i-~i~d~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 228 (323)
+ ++.-.... .....+..+.+.++++.++++..+.| +-.|- .+.... ..+....+..+++.|++.+++.+..+.
T Consensus 106 DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~-~~~~~~~~~~~~~~~~~~~~~~g~~G~ 184 (327)
T 2xbg_A 106 DGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQAL-VQEAIGVMRNLNRSPSGEYVAVSSRGS 184 (327)
T ss_dssp STTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEE-ECSCCCCEEEEEECTTSCEEEEETTSS
T ss_pred CCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEe-ecCCCcceEEEEEcCCCcEEEEECCCc
Confidence 3 22222222 12345778888777777766655544 33332 122222 233456789999999988777665545
Q ss_pred -EEEEEc--CCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-----cC-C--CCccceeEE
Q psy11524 229 -IHIFDI--SSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-----LD-K--PDTGSVYDL 297 (323)
Q Consensus 229 -i~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-----~~-~--~~~~~v~~~ 297 (323)
.+-.|- .+.+.+. ......+..+++.+++ . +.+...++.+.......+ +. . .+...+.++
T Consensus 185 ~~~S~d~gG~tW~~~~----~~~~~~~~~~~~~~~g----~-~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v 255 (327)
T 2xbg_A 185 FYSTWEPGQTAWEPHN----RTTSRRLHNMGFTPDG----R-LWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDL 255 (327)
T ss_dssp EEEEECTTCSSCEEEE----CCSSSCEEEEEECTTS----C-EEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEE
T ss_pred EEEEeCCCCCceeECC----CCCCCccceeEECCCC----C-EEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEE
Confidence 555552 2223332 2344578888998886 3 334444444443321101 11 1 112458899
Q ss_pred EEeeCCCeeEeeecCCeEE
Q psy11524 298 VWSSDATQIAGACANGSLL 316 (323)
Q Consensus 298 ~~s~~g~~l~s~~~dg~i~ 316 (323)
++.+++..++++. +|.|.
T Consensus 256 ~~~~~~~~~~~g~-~g~i~ 273 (327)
T 2xbg_A 256 AYRTPNEVWLAGG-AGALL 273 (327)
T ss_dssp EESSSSCEEEEES-TTCEE
T ss_pred EecCCCEEEEEeC-CCeEE
Confidence 9998877666554 66553
No 293
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.87 E-value=0.0051 Score=49.76 Aligned_cols=160 Identities=15% Similarity=0.051 Sum_probs=98.5
Q ss_pred EEEcCCCCeEEEEeeC-------------CeEEEEeCCCCcee-EeeccCCCeEEEEECCCCCEEEEEc--CCCceEeee
Q psy11524 87 AAWSPDSNKVLLTQAK-------------SLVIKPLSPNNKAT-KWQAHDGLILKVAWCSSTDLILSGG--EDCKYKASF 150 (323)
Q Consensus 87 ~~~sp~~~~l~~~~~~-------------~~~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~i~~i~ 150 (323)
--++++|++|+.+... +..|+..++.+... .+.... +..|+++++.|+-.. .++.-. |+
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~----~~~~s~~g~~Iy~~~~~~~~~~~-Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP----CIYASLIGNYIYYLHYDTQTATS-LY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC----EEEEEEETTEEEEEEESSSSCEE-EE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC----ccEEEEeCCEEEEEeecCCCCce-EE
Confidence 4468899999998754 24677777766532 232221 236778898888776 333332 22
Q ss_pred EEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc
Q psy11524 151 VWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV 228 (323)
Q Consensus 151 v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 228 (323)
..++++.....+..+.. .+++|+++.|+..+. . +|+..++.+...+.+.. +... ..+.|++.+|+-...+.
T Consensus 133 ~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~~ 205 (302)
T 3s25_A 133 RIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVNR 205 (302)
T ss_dssp EEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGGG
T ss_pred EEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcCC
Confidence 66777776666665543 456888999888776 3 89999998765444322 2222 34569898888776543
Q ss_pred ---EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEE
Q psy11524 229 ---IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVA 269 (323)
Q Consensus 229 ---i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~ 269 (323)
|..-++..... .. +... .+ ..|+|++ +.|.
T Consensus 206 ~~~I~~~~ldG~~~-~~--Lt~~--~~--~~~~~~g----~~Iy 238 (302)
T 3s25_A 206 DNAIVHVNINNPNP-VV--LTEA--NI--EHYNVYG----SLIF 238 (302)
T ss_dssp TTEEEEECSSSCCC-EE--CSCS--CE--EEEEEET----TEEE
T ss_pred CcEEEEEECCCCCe-EE--EeCC--Cc--ceEEECC----CEEE
Confidence 66666665443 22 3322 22 3477887 5563
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.80 E-value=0.0035 Score=54.09 Aligned_cols=144 Identities=14% Similarity=0.082 Sum_probs=89.0
Q ss_pred CeEEEEECC-CCCEEEEEcC-CCceEeeeEEeCCCCeeeEeecCC----CceeEEEE-------ecCCCEEEEEeC-C-e
Q psy11524 124 LILKVAWCS-STDLILSGGE-DCKYKASFVWDTDGRQLYSSLTHD----HPISSLAW-------APGGDMFAVGSY-N-T 188 (323)
Q Consensus 124 ~v~~~~~~~-~~~~l~~~~~-d~~i~~i~v~d~~~~~~~~~~~~~----~~v~~~~~-------~p~~~~l~~~~~-~-~ 188 (323)
....|+|.| ++..|+.+.. .+.|+ +.|++.+.+..+.... .....++| +++|+.|+++.. + .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~---~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~ 216 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQ---LIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGK 216 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEE---EEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEE---EEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCC
Confidence 467899998 3554555443 45677 9999887777765432 25789999 999997777765 3 2
Q ss_pred ------EEEEeCCC-Cee------eecCCCCccEEEEEEcCCCCEEEE-EecCc-EEEEEcC-------CCce-------
Q psy11524 189 ------LRLCDKVG-WSH------SLDKPDTGSVYDLVWSNDATQIAG-ACANV-IHIFDIS-------SSSS------- 239 (323)
Q Consensus 189 ------i~i~d~~~-~~~------~~~~~~~~~v~~~~~~~~~~~l~~-~~~d~-i~iwd~~-------~~~~------- 239 (323)
+.+++... ... .... .......++++|++..|+. -..++ |..+|+. ++..
T Consensus 217 ~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~ 295 (496)
T 3kya_A 217 GDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKN 295 (496)
T ss_dssp GGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGG
T ss_pred cccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccc
Confidence 66776333 111 1111 1124567889995555554 44566 9999987 5543
Q ss_pred ----eeeecCCCCccceEEEEEccCCCCccceEEEEeCCC
Q psy11524 240 ----SNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNR 275 (323)
Q Consensus 240 ----~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~ 275 (323)
...+...........++|+|+| +.|.+.+...
T Consensus 296 ~~g~~~~l~~~~~~~~p~~ia~~p~G----~~lYvaD~~~ 331 (496)
T 3kya_A 296 NPNTFKQLFTIADPSWEFQIFIHPTG----KYAYFGVINN 331 (496)
T ss_dssp CTTTEEEEEECSSSSCCEEEEECTTS----SEEEEEETTT
T ss_pred cccccceeEecCCCCCceEEEEcCCC----CEEEEEeCCC
Confidence 1111011223456789999998 6677776543
No 295
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.75 E-value=0.012 Score=48.18 Aligned_cols=164 Identities=10% Similarity=0.073 Sum_probs=98.1
Q ss_pred CCCeEEEEeeCCeEEEEeCCCCceeEeeccCCCeEEEEECCC----CC---EEEEEc-C--CCceEeeeEEeC--CCCee
Q psy11524 92 DSNKVLLTQAKSLVIKPLSPNNKATKWQAHDGLILKVAWCSS----TD---LILSGG-E--DCKYKASFVWDT--DGRQL 159 (323)
Q Consensus 92 ~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~~~~-~--d~~i~~i~v~d~--~~~~~ 159 (323)
....+ .+....+-+.+||+.++....... +.++.+..-|+ |+ ++++.. . +++|. +|++ ..+.+
T Consensus 39 ~~s~i-i~t~k~~gL~Vydl~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~---vf~iDp~~~~l 113 (355)
T 3amr_A 39 QNSKL-ITTNKKSGLVVYSLDGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIE---IYAIDGKNGTL 113 (355)
T ss_dssp GGCEE-EEEETTTEEEEEETTSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEE---EEEECTTTCCE
T ss_pred CccEE-EEEcCCCCEEEEcCCCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEE---EEEECCCCCce
Confidence 33444 455555689999998774433222 66777777663 22 233333 3 57888 9966 44555
Q ss_pred eEeec------CC-CceeEEEE--ecC-CCE-EEEEeC-CeEEEEeCC---CC-----eeeecCCCCccEEEEEEcCCCC
Q psy11524 160 YSSLT------HD-HPISSLAW--APG-GDM-FAVGSY-NTLRLCDKV---GW-----SHSLDKPDTGSVYDLVWSNDAT 219 (323)
Q Consensus 160 ~~~~~------~~-~~v~~~~~--~p~-~~~-l~~~~~-~~i~i~d~~---~~-----~~~~~~~~~~~v~~~~~~~~~~ 219 (323)
..+.. .. ..+..+++ +|. +.+ +++... +.+..|++. .. .+..+ ...+.+..+...+...
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f-~lgsq~EgcvvDd~~g 192 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF-KMNSQTEGMAADDEYG 192 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE-ECSSCEEEEEEETTTT
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe-cCCCCcceEEEcCCCC
Confidence 55522 11 56777888 774 554 444444 488888762 11 12222 2456788999999888
Q ss_pred EEEEEecCc-EEEEEcC-----CCceeeeecCCCCccceEEEEE--ccCC
Q psy11524 220 QIAGACANV-IHIFDIS-----SSSSSNVTAPLSHSHEITQLAV--NQTG 261 (323)
Q Consensus 220 ~l~~~~~d~-i~iwd~~-----~~~~~~~~~~~~~~~~v~~~~~--~p~g 261 (323)
+|+.+-++. |+.+|.+ +++.+...........+..+++ .+++
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g 242 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADG 242 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGG
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCC
Confidence 999999998 9999865 3445544111122246778877 4444
No 296
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.74 E-value=0.0036 Score=56.80 Aligned_cols=155 Identities=14% Similarity=0.186 Sum_probs=94.6
Q ss_pred EEEEcCCCCeEEEEeeCCe------------------EEEEeCCCCcee--Eeec--cC-------CCeEEEEECCCCC-
Q psy11524 86 SAAWSPDSNKVLLTQAKSL------------------VIKPLSPNNKAT--KWQA--HD-------GLILKVAWCSSTD- 135 (323)
Q Consensus 86 ~~~~sp~~~~l~~~~~~~~------------------~v~~~~~~~~~~--~~~~--~~-------~~v~~~~~~~~~~- 135 (323)
.++++|++..++++..+.. .|..+|..+... .++. |. .++....+..+|+
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~ 313 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKP 313 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEE
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcE
Confidence 4788888888887765421 488888766522 2221 22 2222223333665
Q ss_pred --EEEEEcCCCceEeeeEEeCC-CCeeeEeecCC------------Cc------------------------eeEEEEec
Q psy11524 136 --LILSGGEDCKYKASFVWDTD-GRQLYSSLTHD------------HP------------------------ISSLAWAP 176 (323)
Q Consensus 136 --~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~------------~~------------------------v~~~~~~p 176 (323)
.++.++.+|.+. ++|.+ ++.+....... .+ -..++++|
T Consensus 314 ~~~v~~~~~~G~l~---~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp 390 (668)
T 1kv9_A 314 RKVLMQAPKNGFFY---VLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNP 390 (668)
T ss_dssp EEEEEECCTTSEEE---EEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEET
T ss_pred EEEEEEECCCCEEE---EEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECC
Confidence 688899999999 99985 55553221110 00 01267888
Q ss_pred CCCEEEEEe------------------------------------C-CeEEEEeCCCCeeeecCCCCccEEEEEEcCCCC
Q psy11524 177 GGDMFAVGS------------------------------------Y-NTLRLCDKVGWSHSLDKPDTGSVYDLVWSNDAT 219 (323)
Q Consensus 177 ~~~~l~~~~------------------------------------~-~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~ 219 (323)
+...+++.. . +.|..||+.+.++..............+...+.
T Consensus 391 ~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg 470 (668)
T 1kv9_A 391 GTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGN 470 (668)
T ss_dssp TTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTT
T ss_pred CCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCC
Confidence 766655421 2 378899987655443222223333334444677
Q ss_pred EEEEEecCc-EEEEEcCCCceeeee
Q psy11524 220 QIAGACANV-IHIFDISSSSSSNVT 243 (323)
Q Consensus 220 ~l~~~~~d~-i~iwd~~~~~~~~~~ 243 (323)
++++++.|+ ++.||.++++.+..+
T Consensus 471 ~vf~g~~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 471 LVFQGTAAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEECCcccchhhhhhcChhheEe
Confidence 888999999 999999999998874
No 297
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.73 E-value=0.001 Score=60.29 Aligned_cols=222 Identities=7% Similarity=-0.045 Sum_probs=115.6
Q ss_pred CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCcee-Eeec-cCC-CeEEEEECCCCCEEEEEc-CC-----CceEeeeEEe
Q psy11524 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKAT-KWQA-HDG-LILKVAWCSSTDLILSGG-ED-----CKYKASFVWD 153 (323)
Q Consensus 83 ~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~-~~~~-~~~-~v~~~~~~~~~~~l~~~~-~d-----~~i~~i~v~d 153 (323)
...++++.++|+.+++|+.+...+++||.....- .+.. ... .-.+++..++++.++.|+ .+ ..+. +||
T Consensus 244 ~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e---~yd 320 (656)
T 1k3i_A 244 FCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGE---VYS 320 (656)
T ss_dssp SSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEE---EEE
T ss_pred ccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccce---EeC
Confidence 3445788899999999886656789998765521 1111 111 113456677899999988 34 3456 999
Q ss_pred CCCCeeeEeecC-----CCceeEEEEecCCCEEEEEe----------CCeEEEEeCCCCee-eecCCC---------Ccc
Q psy11524 154 TDGRQLYSSLTH-----DHPISSLAWAPGGDMFAVGS----------YNTLRLCDKVGWSH-SLDKPD---------TGS 208 (323)
Q Consensus 154 ~~~~~~~~~~~~-----~~~v~~~~~~p~~~~l~~~~----------~~~i~i~d~~~~~~-~~~~~~---------~~~ 208 (323)
.....-..+... ...-....+..++..++.++ .+.+..||...... ...... ...
T Consensus 321 ~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~ 400 (656)
T 1k3i_A 321 PSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMC 400 (656)
T ss_dssp TTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBT
T ss_pred CCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCC
Confidence 975544443110 00000011223444444443 23678888764321 111111 112
Q ss_pred EEEEEEcC-CCCEEEEEecC------------cEEEEEcCCCceeeee-cCCCCccceEEEEEccCCCCccceEEEEeCC
Q psy11524 209 VYDLVWSN-DATQIAGACAN------------VIHIFDISSSSSSNVT-APLSHSHEITQLAVNQTGSLQERHVAFIDKN 274 (323)
Q Consensus 209 v~~~~~~~-~~~~l~~~~~d------------~i~iwd~~~~~~~~~~-~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~ 274 (323)
-.++.+.. +++.++.|+.+ .+.+||..+.+..... ........-.+++..|++ ..+.++..+
T Consensus 401 ~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g----~i~v~GG~~ 476 (656)
T 1k3i_A 401 GNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDG----STFITGGQR 476 (656)
T ss_dssp CEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTS----CEEEECCBS
T ss_pred CceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCC----CEEEECCcc
Confidence 23444443 67777777632 1567777766544331 001111122345566776 555555432
Q ss_pred -----------CCeEEEecccc----c--CCCCccceeEEEEeeCCCeeEeeec
Q psy11524 275 -----------RDLYLSMWSHS----L--DKPDTGSVYDLVWSSDATQIAGACA 311 (323)
Q Consensus 275 -----------~~~~~~~~~~~----~--~~~~~~~v~~~~~s~~g~~l~s~~~ 311 (323)
..+.+|+.... + .......-....+.|+|+.++.|+.
T Consensus 477 ~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 477 RGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp BCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred cCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 34667776553 1 1111122234456789999998885
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.72 E-value=0.00019 Score=65.36 Aligned_cols=156 Identities=10% Similarity=-0.058 Sum_probs=97.9
Q ss_pred CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCce-eEee-ccCCCeEEEEECCCCCEEEEEcC--CCceEeeeEEeCCCCe
Q psy11524 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKA-TKWQ-AHDGLILKVAWCSSTDLILSGGE--DCKYKASFVWDTDGRQ 158 (323)
Q Consensus 83 ~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~-~~~~-~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~i~v~d~~~~~ 158 (323)
....|++.+.+..|+++....+.|.+.+..+.. ..+. ........+++.|.+..|+.+.. .+.|. +.++++..
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~---~~~~dG~~ 530 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIK---KGGLNGVD 530 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEE---BCCSSSCC
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEE---EEeCCCCC
Confidence 356788887666676665555678888877663 3332 22345678899997665555443 26777 88887655
Q ss_pred eeEee-cCCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCCCeeeecCC---CCccEEEEEEcCCCCEEEEEecCc-EEE
Q psy11524 159 LYSSL-THDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGWSHSLDKP---DTGSVYDLVWSNDATQIAGACANV-IHI 231 (323)
Q Consensus 159 ~~~~~-~~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~d~-i~i 231 (323)
...+. ..-.....|+|+|++..|+.+.. . .|..+|+.+.....+.. .......+++..+ .++++....+ |..
T Consensus 531 ~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~ 609 (699)
T 1n7d_A 531 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFS 609 (699)
T ss_dssp CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEE
T ss_pred eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEE
Confidence 44442 22345678999998777776666 4 99999987653333221 1233455666554 3333444455 999
Q ss_pred EEcCCCceeee
Q psy11524 232 FDISSSSSSNV 242 (323)
Q Consensus 232 wd~~~~~~~~~ 242 (323)
+|..+++.+..
T Consensus 610 ~d~~~G~~~~~ 620 (699)
T 1n7d_A 610 ANRLTGSDVNL 620 (699)
T ss_dssp EETTTEEEEEC
T ss_pred EEccCCCceEE
Confidence 99888887776
No 299
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.70 E-value=0.0052 Score=54.60 Aligned_cols=145 Identities=11% Similarity=0.038 Sum_probs=79.8
Q ss_pred CCeEEEEeeCCeEEEEeCCCCcee--Eee--ccCC--CeE-EEEECCCCCEEEEEcC------CCceEeeeEEeCC-CCe
Q psy11524 93 SNKVLLTQAKSLVIKPLSPNNKAT--KWQ--AHDG--LIL-KVAWCSSTDLILSGGE------DCKYKASFVWDTD-GRQ 158 (323)
Q Consensus 93 ~~~l~~~~~~~~~v~~~~~~~~~~--~~~--~~~~--~v~-~~~~~~~~~~l~~~~~------d~~i~~i~v~d~~-~~~ 158 (323)
+..+++++.+ +.++.+|..+... ... .+.. .+. ..... ++ .+++++. ++.|. .+|.+ ++.
T Consensus 115 ~~~v~v~~~d-g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g-~v~vg~~~~~~~~~g~v~---a~D~~tG~~ 188 (571)
T 2ad6_A 115 AGQIVKKQAN-GHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KD-TVLMGCSGAELGVRGAVN---AFDLKTGEL 188 (571)
T ss_dssp TTEEEEECTT-SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEEECBCGGGTCCCEEE---EEETTTCCE
T ss_pred CCEEEEEeCC-CEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CC-EEEEEecCCccCCCCEEE---EEECCCCcE
Confidence 4566666555 5888888755422 211 1110 111 11111 33 5555554 78888 99985 777
Q ss_pred eeEeecCCCc--------------------------------------eeEEEEecCCCEEEEEeC--------------
Q psy11524 159 LYSSLTHDHP--------------------------------------ISSLAWAPGGDMFAVGSY-------------- 186 (323)
Q Consensus 159 ~~~~~~~~~~--------------------------------------v~~~~~~p~~~~l~~~~~-------------- 186 (323)
+..+...... ...+++.++...++.+..
T Consensus 189 ~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~ 268 (571)
T 2ad6_A 189 KWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDN 268 (571)
T ss_dssp EEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCC
T ss_pred EEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCc
Confidence 7665432211 023567776666665542
Q ss_pred ---CeEEEEeCCCCeee-ec--CCCC-------ccEEEEEEcCCCC---EEEEEecCc-EEEEEcCCCceeeee
Q psy11524 187 ---NTLRLCDKVGWSHS-LD--KPDT-------GSVYDLVWSNDAT---QIAGACANV-IHIFDISSSSSSNVT 243 (323)
Q Consensus 187 ---~~i~i~d~~~~~~~-~~--~~~~-------~~v~~~~~~~~~~---~l~~~~~d~-i~iwd~~~~~~~~~~ 243 (323)
+.|..+|.++.+.. .. ..|. ....-+...++|+ .++.++.++ ++++|.++|+.+...
T Consensus 269 ~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 269 KWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp TTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred eeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 14888998754333 21 1121 1111122334774 567788899 999999999887654
No 300
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.60 E-value=0.022 Score=47.17 Aligned_cols=137 Identities=12% Similarity=0.045 Sum_probs=74.9
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeE----e----eccCCCeEEEEECCC---CCEEEEEc-C-------
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATK----W----QAHDGLILKVAWCSS---TDLILSGG-E------- 142 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~----~----~~~~~~v~~~~~~~~---~~~l~~~~-~------- 142 (323)
.....|+|.|+|++|+++.. .+.|++++..+.... + .........++++|+ +..|+.+. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~-~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLR-GGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEET-TTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeC-CceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 45689999999984444434 468888875543211 1 112346789999996 44444442 2
Q ss_pred CCceEeeeEEeCCCC-----eeeE-eecC------CCceeEEEEecCCCEEEEEeC--------------CeEEEEeCCC
Q psy11524 143 DCKYKASFVWDTDGR-----QLYS-SLTH------DHPISSLAWAPGGDMFAVGSY--------------NTLRLCDKVG 196 (323)
Q Consensus 143 d~~i~~i~v~d~~~~-----~~~~-~~~~------~~~v~~~~~~p~~~~l~~~~~--------------~~i~i~d~~~ 196 (323)
...|. .++++.. .... +... ......++|.|||.++++.++ +.|.-+|..+
T Consensus 97 ~~~v~---r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 97 GTAVG---YGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp EEEEE---EEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred eeEEE---EEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 12344 6666421 1111 1111 112457999999966555433 2466666654
Q ss_pred Ce-------------ee-ecCCCCccEEEEEEcC-CCCEEEE
Q psy11524 197 WS-------------HS-LDKPDTGSVYDLVWSN-DATQIAG 223 (323)
Q Consensus 197 ~~-------------~~-~~~~~~~~v~~~~~~~-~~~~l~~ 223 (323)
.. .. ...++ .....++|+| +|++.++
T Consensus 174 ~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 174 EIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred CCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 31 11 11122 3477899999 6654444
No 301
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.57 E-value=0.024 Score=46.90 Aligned_cols=174 Identities=15% Similarity=0.132 Sum_probs=91.8
Q ss_pred CCCEEEEEEcCC---CCeEEEEeeCC-----eEEEEeCCCCc-------ee-Eeec---cCCCeEEEEECCCCCEEEEEc
Q psy11524 81 SPPVYSAAWSPD---SNKVLLTQAKS-----LVIKPLSPNNK-------AT-KWQA---HDGLILKVAWCSSTDLILSGG 141 (323)
Q Consensus 81 ~~~v~~~~~sp~---~~~l~~~~~~~-----~~v~~~~~~~~-------~~-~~~~---~~~~v~~~~~~~~~~~l~~~~ 141 (323)
......|+|+|+ +..|+++.... ..|..++.... +. .+.. .......++|.|||.+.++.+
T Consensus 74 ~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 74 ESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred CCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 467899999998 66666554421 45666665432 11 1221 111236899999997666643
Q ss_pred CC-------------CceEeeeEEeCCCC-------------eeeEeecCCCceeEEEEec-CCCEEEEEeC-Ce-----
Q psy11524 142 ED-------------CKYKASFVWDTDGR-------------QLYSSLTHDHPISSLAWAP-GGDMFAVGSY-NT----- 188 (323)
Q Consensus 142 ~d-------------~~i~~i~v~d~~~~-------------~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~-~~----- 188 (323)
.. |.|. .++.++. ....+...-.....++|+| +++++++-.. +.
T Consensus 154 ~~~~~~~~~d~~~~~g~I~---ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~ 230 (352)
T 2ism_A 154 EVYERELAQDLASLGGKIL---RLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYG 230 (352)
T ss_dssp CTTCGGGGGCTTCSSSEEE---EECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------C
T ss_pred CCCCCccccCCCCCceEEE---EEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCC
Confidence 21 4555 6666552 1122221223467889999 6665555433 23
Q ss_pred ---EEEEeCCC---C--------------eeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCce------ee
Q psy11524 189 ---LRLCDKVG---W--------------SHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSS------SN 241 (323)
Q Consensus 189 ---i~i~d~~~---~--------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~------~~ 241 (323)
|.+....+ + ..... .+......++| .+|..+++....+ |...++..... ..
T Consensus 231 ~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~-~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~ 308 (352)
T 2ism_A 231 HDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFW-PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVE 308 (352)
T ss_dssp CCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEEC-TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEE
T ss_pred CeEEEEeccCCcCCCCcccCCCCCCCCcCCeEec-CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchh
Confidence 43332211 0 01111 12234567777 4566555544555 87777654331 11
Q ss_pred eecCCCCccceEEEEEccCC
Q psy11524 242 VTAPLSHSHEITQLAVNQTG 261 (323)
Q Consensus 242 ~~~~~~~~~~v~~~~~~p~g 261 (323)
. +......+..+++.|+|
T Consensus 309 ~--~~~~~~rp~~v~~~pdG 326 (352)
T 2ism_A 309 T--ALSGFGRLREVQVGPDG 326 (352)
T ss_dssp E--EEESSCCEEEEEECTTS
T ss_pred e--ecccCCCeeEEEECCCC
Confidence 2 11223568889999986
No 302
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.55 E-value=0.0083 Score=53.45 Aligned_cols=151 Identities=17% Similarity=0.194 Sum_probs=83.2
Q ss_pred EEEcCCCCe----EEEEeeCCeEEEEeCCCCceeEe--eccC----CCeE-EEEECCCCCEEEEEc------CCCceEee
Q psy11524 87 AAWSPDSNK----VLLTQAKSLVIKPLSPNNKATKW--QAHD----GLIL-KVAWCSSTDLILSGG------EDCKYKAS 149 (323)
Q Consensus 87 ~~~sp~~~~----l~~~~~~~~~v~~~~~~~~~~~~--~~~~----~~v~-~~~~~~~~~~l~~~~------~d~~i~~i 149 (323)
++++|.+.. +++++.+ +.|+-+|..+....+ .... ..+. ..... ++ .+++++ .++.|+
T Consensus 111 ~av~p~~g~~~~rV~v~t~d-g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~-- 185 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLD-GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLT-- 185 (599)
T ss_dssp CEEECCCSSSCCEEEEECTT-SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEE--
T ss_pred eEEEecCCcceeEEEEEcCC-CEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEE--
Confidence 455444444 7666555 578888865542221 1111 0111 11111 34 455554 378888
Q ss_pred eEEeCC-CCeeeEeecCCCc-------------------------------------e-eEEEEecCCCEEEEEeCC---
Q psy11524 150 FVWDTD-GRQLYSSLTHDHP-------------------------------------I-SSLAWAPGGDMFAVGSYN--- 187 (323)
Q Consensus 150 ~v~d~~-~~~~~~~~~~~~~-------------------------------------v-~~~~~~p~~~~l~~~~~~--- 187 (323)
.+|.+ ++.+..+...... + ..+++.++...++.+..+
T Consensus 186 -A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p 264 (599)
T 1w6s_A 186 -AYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAP 264 (599)
T ss_dssp -EEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSC
T ss_pred -EEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCcc
Confidence 99985 7777665432211 0 135666766676666542
Q ss_pred --------------eEEEEeCCCCeee-e--cCCCCc-------cEEEEEEc-CCC---CEEEEEecCc-EEEEEcCCCc
Q psy11524 188 --------------TLRLCDKVGWSHS-L--DKPDTG-------SVYDLVWS-NDA---TQIAGACANV-IHIFDISSSS 238 (323)
Q Consensus 188 --------------~i~i~d~~~~~~~-~--~~~~~~-------~v~~~~~~-~~~---~~l~~~~~d~-i~iwd~~~~~ 238 (323)
.|..+|.++.+.. . ...|.. ...-+... .+| +.++.++.++ ++++|.++|+
T Consensus 265 ~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 344 (599)
T 1w6s_A 265 WNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGA 344 (599)
T ss_dssp SCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCC
T ss_pred ccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCC
Confidence 6888898754433 1 222211 11112222 567 4677788899 9999999999
Q ss_pred eeeee
Q psy11524 239 SSNVT 243 (323)
Q Consensus 239 ~~~~~ 243 (323)
.+...
T Consensus 345 ~lw~~ 349 (599)
T 1w6s_A 345 LVSAN 349 (599)
T ss_dssp EEEEE
T ss_pred Eeecc
Confidence 87653
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.54 E-value=0.027 Score=46.55 Aligned_cols=147 Identities=9% Similarity=0.093 Sum_probs=89.2
Q ss_pred CEEEEEEcC--CCC-eEEEEeeC--CeEEEEe--CCCCce----eEeecc-CCCeEEEEECCCCCEEEEEcC--------
Q psy11524 83 PVYSAAWSP--DSN-KVLLTQAK--SLVIKPL--SPNNKA----TKWQAH-DGLILKVAWCSSTDLILSGGE-------- 142 (323)
Q Consensus 83 ~v~~~~~sp--~~~-~l~~~~~~--~~~v~~~--~~~~~~----~~~~~~-~~~v~~~~~~~~~~~l~~~~~-------- 142 (323)
....+.+.+ +|+ +|+++... +..+.+| +..+.. ..+... -...+++.+.++|.+.++...
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence 567777765 354 45555433 2345454 444332 222222 245789999999987776541
Q ss_pred ---------CCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEEeC-C-eEEEEeCCC-Cee---eecCCCCc
Q psy11524 143 ---------DCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVGSY-N-TLRLCDKVG-WSH---SLDKPDTG 207 (323)
Q Consensus 143 ---------d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~-~~~---~~~~~~~~ 207 (323)
.|.+. .++.. .+..+...-...+.++|+||++.++++.. . .|+.|++.. ..+ ..+ ...+
T Consensus 193 ~~e~~~~~~~g~vy---r~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g 266 (355)
T 3sre_A 193 SWEMHLGLAWSFVT---YYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDT 266 (355)
T ss_dssp HHHHHTTCCCEEEE---EECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSS
T ss_pred cchhhccCCccEEE---EEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCC
Confidence 13333 55542 34444334456789999999999888876 3 999999752 211 122 2356
Q ss_pred cEEEEEEcC-CCCEEEEEecCc--EEEEEcC
Q psy11524 208 SVYDLVWSN-DATQIAGACANV--IHIFDIS 235 (323)
Q Consensus 208 ~v~~~~~~~-~~~~l~~~~~d~--i~iwd~~ 235 (323)
....+++.+ +|++.+++..++ |..|+..
T Consensus 267 ~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 267 LVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred CCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 678899999 598777666565 5555543
No 304
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.50 E-value=0.013 Score=49.04 Aligned_cols=137 Identities=15% Similarity=0.142 Sum_probs=86.7
Q ss_pred CCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecC----CCceeEEEEecCCCEEEEEeCCeEEEEeCC-CC---e-----
Q psy11524 133 STDLILSGGEDCKYKASFVWDTD-GRQLYSSLTH----DHPISSLAWAPGGDMFAVGSYNTLRLCDKV-GW---S----- 198 (323)
Q Consensus 133 ~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~----~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~-~~---~----- 198 (323)
+|..++.+- ++.|| .-++. ...-+.+... -..+..+..+|+|++||..+...|.|..+. +. .
T Consensus 31 n~t~i~~a~-~n~iR---~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIR---WYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTEEEEEE-TTEEE---EEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHH
T ss_pred CCCEEEEEE-CCEEE---EEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccc
Confidence 444444433 46676 66665 3222233222 225788999999999999988888888865 21 0
Q ss_pred --e--ee--cC----CCCccEEEEEEcCC---CCEEEEEecCc-EEEEEcCCCc--eeeeec-------CCCCccceEEE
Q psy11524 199 --H--SL--DK----PDTGSVYDLVWSND---ATQIAGACANV-IHIFDISSSS--SSNVTA-------PLSHSHEITQL 255 (323)
Q Consensus 199 --~--~~--~~----~~~~~v~~~~~~~~---~~~l~~~~~d~-i~iwd~~~~~--~~~~~~-------~~~~~~~v~~~ 255 (323)
. .. .. ....+|..+.|+|- +..|++-..|+ |++||+.... +. .+. +......+.++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEE
Confidence 0 01 10 02467999999994 56899999999 9999988632 22 110 11223578899
Q ss_pred EEccCCCCccceEEEEe--CCCCeE
Q psy11524 256 AVNQTGSLQERHVAFID--KNRDLY 278 (323)
Q Consensus 256 ~~~p~g~~~d~~l~~~~--~~~~~~ 278 (323)
+|.+++ -+|.+.. ..|.++
T Consensus 186 ~Fg~~~----lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 186 EFSKDG----LTLYCLNTTEGGDIF 206 (452)
T ss_dssp EECTTS----SCEEEEECTTSCEEE
T ss_pred EEcCCC----cEEEEEecCCCCCEE
Confidence 999976 6676655 445554
No 305
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.48 E-value=0.035 Score=49.35 Aligned_cols=72 Identities=11% Similarity=0.074 Sum_probs=39.9
Q ss_pred Cc-EEEEEcCCCceeeeecCCC--CccceE---EEEEccCCCCccceEEEEeCCCCeEEEecccccCCCCccce--eEEE
Q psy11524 227 NV-IHIFDISSSSSSNVTAPLS--HSHEIT---QLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSLDKPDTGSV--YDLV 298 (323)
Q Consensus 227 d~-i~iwd~~~~~~~~~~~~~~--~~~~v~---~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~ 298 (323)
++ |.-||+.+++.+-+..... ...++. .+.|.. ..|+.|..+|.+....+|..+. ...+ .-+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g---~~dg~l~A~D~~tG~~lW~~~~------~~g~~a~P~~ 535 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTG---TGDGYFKAFDAKSGKELWKFQT------GSGIVSPPIT 535 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEE---CTTSEEEEEETTTCCEEEEEEC------SSCCCSCCEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEE---CCCCcEEEEECCCCCEEEEecC------CCCcccCceE
Confidence 56 9999999998876532211 111111 122222 2246777777776777777655 2222 2366
Q ss_pred EeeCCCeeE
Q psy11524 299 WSSDATQIA 307 (323)
Q Consensus 299 ~s~~g~~l~ 307 (323)
+..+|+..+
T Consensus 536 y~~~G~qYv 544 (582)
T 1flg_A 536 WEQDGEQYL 544 (582)
T ss_dssp EEETTEEEE
T ss_pred EEECCEEEE
Confidence 778887443
No 306
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.44 E-value=0.01 Score=52.65 Aligned_cols=56 Identities=9% Similarity=-0.072 Sum_probs=35.5
Q ss_pred eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeee
Q psy11524 188 TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVT 243 (323)
Q Consensus 188 ~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~ 243 (323)
.+..||+.+.+..........+....+...+..++.++.|+ |+.+|.++|+.+.++
T Consensus 445 ~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 445 QIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp EEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred eEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence 78888877543332211222222222233455777888999 999999999998874
No 307
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.43 E-value=0.037 Score=45.70 Aligned_cols=174 Identities=11% Similarity=0.050 Sum_probs=97.7
Q ss_pred CCEEEEEEcCCCCeEEEEe-----------eCCeEEEEeCCCCc---ee--Eeec-----cCCCeEEEEECC--CCC-EE
Q psy11524 82 PPVYSAAWSPDSNKVLLTQ-----------AKSLVIKPLSPNNK---AT--KWQA-----HDGLILKVAWCS--STD-LI 137 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~-----------~~~~~v~~~~~~~~---~~--~~~~-----~~~~v~~~~~~~--~~~-~l 137 (323)
.....+...|+|..+++++ ...|.|+++|..+. .. .+.+ .......+.+.+ +++ +|
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp SCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred CCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 3455666677664444331 24578999987632 22 2222 234677787765 454 44
Q ss_pred EEEc-C--CCceEeeeEEeC--CCCeeeEe---ecC-CCceeEEEEecCCCEEEEEe-----------------C-CeEE
Q psy11524 138 LSGG-E--DCKYKASFVWDT--DGRQLYSS---LTH-DHPISSLAWAPGGDMFAVGS-----------------Y-NTLR 190 (323)
Q Consensus 138 ~~~~-~--d~~i~~i~v~d~--~~~~~~~~---~~~-~~~v~~~~~~p~~~~l~~~~-----------------~-~~i~ 190 (323)
+++. . +.+|. +|++ .++....+ .+. -...+.+++.++|.++++.. . +.++
T Consensus 130 ~Vvnh~~~~s~ie---lf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 130 LVVNHPGSSSTVE---VFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EEEECSTTCCEEE---EEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EEEECCCCCCeEE---EEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence 4443 3 45666 6665 34433322 221 23578999999998776654 1 2455
Q ss_pred EEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecC-c-EEEEEcCC-CceeeeecCCCCccceEEEEEcc-CC
Q psy11524 191 LCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACAN-V-IHIFDISS-SSSSNVTAPLSHSHEITQLAVNQ-TG 261 (323)
Q Consensus 191 i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-~-i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~p-~g 261 (323)
-+|.. ........-...+.++|+||++.|+.+... + |+.|++.. ++......+ ......-.+++.+ +|
T Consensus 207 r~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G 278 (355)
T 3sre_A 207 YYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTG 278 (355)
T ss_dssp EECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTC
T ss_pred EEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCC
Confidence 55543 222222233457899999999988877654 4 99999863 332211002 2234566777777 46
No 308
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.36 E-value=0.031 Score=46.91 Aligned_cols=143 Identities=10% Similarity=0.072 Sum_probs=94.9
Q ss_pred EecCCCEEEEEeCCeEEEEeCC-CCeeeecCC----CCccEEEEEEcCCCCEEEEEecCcEEEEEcCCCce---------
Q psy11524 174 WAPGGDMFAVGSYNTLRLCDKV-GWSHSLDKP----DTGSVYDLVWSNDATQIAGACANVIHIFDISSSSS--------- 239 (323)
Q Consensus 174 ~~p~~~~l~~~~~~~i~i~d~~-~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~d~i~iwd~~~~~~--------- 239 (323)
...+|..++++-.+.||.-++. ....+.+.. .-..+..+..+|+|++||..+..+|.|..+..+..
T Consensus 28 ~~~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 28 SSQNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp EETTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHH
T ss_pred EEcCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCccccccc
Confidence 3456777777777788888866 333332221 12357889999999999998776688887763321
Q ss_pred ---eeeecCCC----CccceEEEEEccCCCCccceEEEEeCCCCeEEEeccccc-----C-C--------CCccceeEEE
Q psy11524 240 ---SNVTAPLS----HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSL-----D-K--------PDTGSVYDLV 298 (323)
Q Consensus 240 ---~~~~~~~~----~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~~-----~-~--------~~~~~v~~~~ 298 (323)
.+.+.+.. ...+|..+.|+|-+. .+..|.+-..++.+++|++.... . + .....|.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~-~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSY-RDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBG-GGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccC-CCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence 11111111 246799999999873 34678888888889998887520 0 0 0125788999
Q ss_pred EeeCCCeeEeee--cCCeEEE
Q psy11524 299 WSSDATQIAGAC--ANGSLLL 317 (323)
Q Consensus 299 ~s~~g~~l~s~~--~dg~i~~ 317 (323)
|.+++=.|...+ ..|.|+-
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEE
Confidence 999887777644 7787763
No 309
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.33 E-value=0.03 Score=42.45 Aligned_cols=138 Identities=13% Similarity=0.089 Sum_probs=78.9
Q ss_pred CceeEEEEecCCCEEEEEeCCeEEEEeCCC-CeeeecC-------CCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCC
Q psy11524 167 HPISSLAWAPGGDMFAVGSYNTLRLCDKVG-WSHSLDK-------PDTGSVYDLVWSNDATQIAGACANV-IHIFDISSS 237 (323)
Q Consensus 167 ~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~-~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~ 237 (323)
..+..++|+|+|.+.++ ..+.++-.+..+ ....... ..-.....+.|.|+|.+.++ .|+ |+-++..+.
T Consensus 41 ~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred ccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 36779999999997777 667877777543 1111111 01112478999999987666 558 877775432
Q ss_pred ceee-----eecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-----------cCCCCccceeEEEEee
Q psy11524 238 SSSN-----VTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-----------LDKPDTGSVYDLVWSS 301 (323)
Q Consensus 238 ~~~~-----~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-----------~~~~~~~~v~~~~~s~ 301 (323)
..-. +..-...-..+..+.|.|+| .|.... ++.++....... +-+..-..-.-+.|.|
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G-----~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~ 191 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNG-----YLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSS 191 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTS-----CEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECT
T ss_pred CCCceeccccEeccCCCCceEEEEECCCc-----eEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECC
Confidence 1110 00011222467899999997 555555 666443322211 0001122345577999
Q ss_pred CCCeeEeeecCCeE
Q psy11524 302 DATQIAGACANGSL 315 (323)
Q Consensus 302 ~g~~l~s~~~dg~i 315 (323)
+|.+.+.. +|.+
T Consensus 192 ~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 192 VGTLFGVQ--GGKF 203 (236)
T ss_dssp TSCEEEEE--TTEE
T ss_pred CCcEEEEe--CCeE
Confidence 98766655 7743
No 310
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.30 E-value=0.014 Score=51.84 Aligned_cols=82 Identities=13% Similarity=0.078 Sum_probs=45.3
Q ss_pred eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccc
Q psy11524 188 TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQER 266 (323)
Q Consensus 188 ~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~ 266 (323)
.|..||+.+.++........+...-.....+.+++.++.|+ ++.||.++|+.+.+++... .....-+.+..+|+ .
T Consensus 467 ~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~-g~~a~P~~y~~~G~---q 542 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS-GIVSPPITWEQDGE---Q 542 (582)
T ss_dssp EEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS-CCCSCCEEEEETTE---E
T ss_pred eEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCC-CcccCceEEEECCE---E
Confidence 78888977544332111111221111122356788899999 9999999999998743321 11112245556652 4
Q ss_pred eEEEEeC
Q psy11524 267 HVAFIDK 273 (323)
Q Consensus 267 ~l~~~~~ 273 (323)
+|.+.+.
T Consensus 543 Yv~~~~G 549 (582)
T 1flg_A 543 YLGVTVG 549 (582)
T ss_dssp EEEEEEC
T ss_pred EEEEEcc
Confidence 5555443
No 311
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.12 E-value=0.032 Score=49.73 Aligned_cols=82 Identities=9% Similarity=-0.020 Sum_probs=43.2
Q ss_pred eEEEEeCCCCeeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccc
Q psy11524 188 TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQER 266 (323)
Q Consensus 188 ~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~ 266 (323)
.+..||+.+.++........+...-.....+..++.++.|+ ++.||.++|+.+.+.++.. .....-+.+..+|+ .
T Consensus 454 ~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~-g~~~~P~~y~~~G~---q 529 (599)
T 1w6s_A 454 QIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPS-GAIGYPMTYTHKGT---Q 529 (599)
T ss_dssp EEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS-CCCSCCEEEEETTE---E
T ss_pred eEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCC-CcEeccEEEEeCCE---E
Confidence 67777766443332211111111111222456777888999 9999999999988743322 11122244555652 3
Q ss_pred eEEEEeC
Q psy11524 267 HVAFIDK 273 (323)
Q Consensus 267 ~l~~~~~ 273 (323)
+|.+...
T Consensus 530 yv~~~~G 536 (599)
T 1w6s_A 530 YVAIYYG 536 (599)
T ss_dssp EEEEEEC
T ss_pred EEEEEcc
Confidence 4555443
No 312
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.03 E-value=0.021 Score=43.36 Aligned_cols=135 Identities=11% Similarity=-0.021 Sum_probs=78.9
Q ss_pred CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEeeccCCC--------eEEEEECCCCCEEEEEcCCCceEeeeEEe
Q psy11524 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQAHDGL--------ILKVAWCSSTDLILSGGEDCKYKASFVWD 153 (323)
Q Consensus 83 ~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~d~~i~~i~v~d 153 (323)
.+..++|+|+|...++ .+ +.++-.+.... ...+...... -.++.|.|+|.+.++ .||.|. -++
T Consensus 42 ~~~~laf~P~G~LYaV--~~-G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iy---r~~ 113 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LN-DKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLY---KAS 113 (236)
T ss_dssp TCSEEEECTTSCEEEE--ET-TEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEE---EES
T ss_pred cceeEEECCCccEEEE--eC-CeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEE---EeC
Confidence 5669999999986655 44 57777765431 1111111122 368899999988777 568887 777
Q ss_pred C--CCCee-----eEe-ecCCCceeEEEEecCCCEEEEEeCCeEEEEeCC-CCe------e-eecCCCCccEEEEEEcCC
Q psy11524 154 T--DGRQL-----YSS-LTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKV-GWS------H-SLDKPDTGSVYDLVWSND 217 (323)
Q Consensus 154 ~--~~~~~-----~~~-~~~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~-~~~------~-~~~~~~~~~v~~~~~~~~ 217 (323)
. ++... ..+ ...-..+..+.|.|+|.+.++. ++.++-.... +.. . ......-...+.+.|.|+
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~ 192 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSV 192 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTT
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCC
Confidence 5 22111 111 1122467899999999988888 6565433322 110 1 111122334556778888
Q ss_pred CCEEEEEecCc
Q psy11524 218 ATQIAGACANV 228 (323)
Q Consensus 218 ~~~l~~~~~d~ 228 (323)
|...++. ++
T Consensus 193 G~l~~v~--~g 201 (236)
T 1tl2_A 193 GTLFGVQ--GG 201 (236)
T ss_dssp SCEEEEE--TT
T ss_pred CcEEEEe--CC
Confidence 8766655 55
No 313
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.56 E-value=0.25 Score=40.60 Aligned_cols=140 Identities=13% Similarity=0.111 Sum_probs=79.0
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEe-------eccCCCeEEEEECCC---CCEEEEE---cCCCc
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKW-------QAHDGLILKVAWCSS---TDLILSG---GEDCK 145 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~-------~~~~~~v~~~~~~~~---~~~l~~~---~~d~~ 145 (323)
.-.....|+|.|+|..+++ ....|.|+.++.... ...+ .........|+++|+ +..|+.. ..++.
T Consensus 30 gL~~P~~ia~~pdG~llVt-er~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~ 108 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVS-SRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNR 108 (347)
T ss_dssp CCSSEEEEEECTTSCEEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEE
T ss_pred CCCCceEEEEcCCCcEEEE-EecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCE
Confidence 4567889999999986654 343578888876433 2222 123456889999996 3444432 23445
Q ss_pred eEeeeEEeCCC---------Ceee---Eeec-CCCceeEEEEecCCCEEEEEeC--------------CeEEEEeCCCCe
Q psy11524 146 YKASFVWDTDG---------RQLY---SSLT-HDHPISSLAWAPGGDMFAVGSY--------------NTLRLCDKVGWS 198 (323)
Q Consensus 146 i~~i~v~d~~~---------~~~~---~~~~-~~~~v~~~~~~p~~~~l~~~~~--------------~~i~i~d~~~~~ 198 (323)
|. -|..+. .... .+.. ....-..++|.|||.++++.++ +.|.-.+..+..
T Consensus 109 v~---R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~i 185 (347)
T 3das_A 109 IV---RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEP 185 (347)
T ss_dssp EE---EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSB
T ss_pred EE---EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCc
Confidence 55 565543 1111 1111 1123457999999987776542 244444544320
Q ss_pred ---------eeecCCCCccEEEEEEcCCCCEEEEE
Q psy11524 199 ---------HSLDKPDTGSVYDLVWSNDATQIAGA 224 (323)
Q Consensus 199 ---------~~~~~~~~~~v~~~~~~~~~~~l~~~ 224 (323)
.....++. ....++|+|+|.+.++-
T Consensus 186 p~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d 219 (347)
T 3das_A 186 APGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASE 219 (347)
T ss_dssp CTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEE
T ss_pred cCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEe
Confidence 11222332 35689999988765543
No 314
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.53 E-value=0.24 Score=42.56 Aligned_cols=101 Identities=15% Similarity=0.207 Sum_probs=57.7
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCC-CceeE---eec------cCCCeEEEEECCC---CCEEEEEcC-----
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPN-NKATK---WQA------HDGLILKVAWCSS---TDLILSGGE----- 142 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~-~~~~~---~~~------~~~~v~~~~~~~~---~~~l~~~~~----- 142 (323)
-.....|+|.|+|+.+++ ....+.|+.++.. +.... +.. .......|+|+|+ +..|+.+..
T Consensus 26 l~~P~~~a~~pdG~l~V~-e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLT-ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTSCEEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEE-EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 446779999999986664 3443467777654 22222 211 2456779999995 445444432
Q ss_pred --------CCceEeeeEEeCCC--Cee---eE----eec-CCCceeEEEEecCCCEEEEEe
Q psy11524 143 --------DCKYKASFVWDTDG--RQL---YS----SLT-HDHPISSLAWAPGGDMFAVGS 185 (323)
Q Consensus 143 --------d~~i~~i~v~d~~~--~~~---~~----~~~-~~~~v~~~~~~p~~~~l~~~~ 185 (323)
...|. .++.+. ..+ .. +.. .......|+|.|||.++++.+
T Consensus 105 ~~~~~~~~~~~v~---r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIR---RYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEE---EEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEE---EEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 12344 555421 111 11 111 123468899999998877654
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.51 E-value=0.28 Score=40.55 Aligned_cols=193 Identities=11% Similarity=0.127 Sum_probs=100.5
Q ss_pred CCCEEEEEEcCC---CCeEEEEeeC-------CeEEEEeCCCCc------eeE-eecc------CCCeEEEEECCCCCEE
Q psy11524 81 SPPVYSAAWSPD---SNKVLLTQAK-------SLVIKPLSPNNK------ATK-WQAH------DGLILKVAWCSSTDLI 137 (323)
Q Consensus 81 ~~~v~~~~~sp~---~~~l~~~~~~-------~~~v~~~~~~~~------~~~-~~~~------~~~v~~~~~~~~~~~l 137 (323)
......|+++|+ +.+|.++... ...|..++.... ... +... ......++|.|||.+.
T Consensus 65 ~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Ly 144 (353)
T 2g8s_A 65 QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLF 144 (353)
T ss_dssp TCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEE
T ss_pred CCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEE
Confidence 456789999996 5566555322 234555543211 111 1111 1123579999999766
Q ss_pred EEEcCC-------------CceEeeeEEeCCCC-------------eeeEeecCCCceeEEEEec-CCCEEEEEeC-C--
Q psy11524 138 LSGGED-------------CKYKASFVWDTDGR-------------QLYSSLTHDHPISSLAWAP-GGDMFAVGSY-N-- 187 (323)
Q Consensus 138 ~~~~~d-------------~~i~~i~v~d~~~~-------------~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~-~-- 187 (323)
++.+.. |.|. -++.+++ ....+...-.....++|+| +|+++++-.. +
T Consensus 145 v~~Gd~~~~~~~q~~~~~~g~I~---ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~ 221 (353)
T 2g8s_A 145 IALGENNQRPTAQDLDKLQGKLV---RLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGG 221 (353)
T ss_dssp EEECCTTCGGGGGCTTSCTTEEE---EEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSC
T ss_pred EEECCCCCCCccCCCCCCCeEEE---EECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCC
Confidence 654432 4565 6676654 2222222234478899999 6665554332 1
Q ss_pred -eEEEEeCCC---Cee---------------------------eecCCCCccEEEEEEcC-------CCCEEEEEecCc-
Q psy11524 188 -TLRLCDKVG---WSH---------------------------SLDKPDTGSVYDLVWSN-------DATQIAGACANV- 228 (323)
Q Consensus 188 -~i~i~d~~~---~~~---------------------------~~~~~~~~~v~~~~~~~-------~~~~l~~~~~d~- 228 (323)
.|.+....+ +.. ... .+...+..+.|.. +|+++++....+
T Consensus 222 dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~-~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~ 300 (353)
T 2g8s_A 222 DEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYW-KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKD 300 (353)
T ss_dssp EEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEE-SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTE
T ss_pred cEEeEeccCCcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEe-CCCcCcceeEEECCccCcccCCcEEEEEccCCE
Confidence 343322110 000 000 1123466778864 466666555566
Q ss_pred EEEEEcCCCceeeeecC-CCCccceEEEEEccCCCCccceEEEEeCCCCeEEEec
Q psy11524 229 IHIFDISSSSSSNVTAP-LSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMW 282 (323)
Q Consensus 229 i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~ 282 (323)
|...++..++......+ ......+..+++.|+| . |.+.+....-.+|.+
T Consensus 301 v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG----~-lyv~td~~~g~I~ri 350 (353)
T 2g8s_A 301 VIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDG----Y-LYVLTDESSGELLKV 350 (353)
T ss_dssp EEEEEEETTEEEEEEEESGGGCCCEEEEEECTTS----C-EEEEECSTTEEEEEE
T ss_pred EEEEEeCCCeEeeeEEcccCCCCceeEEEECCCC----c-EEEEEeCCCCEEEEE
Confidence 88888776654332112 2223478899999997 3 555433333344443
No 316
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.39 E-value=0.29 Score=39.60 Aligned_cols=193 Identities=10% Similarity=0.099 Sum_probs=119.8
Q ss_pred CCCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc---eeEeecc----CCCeEEEEECCCCCEEEEEcC---C----C
Q psy11524 79 NVSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK---ATKWQAH----DGLILKVAWCSSTDLILSGGE---D----C 144 (323)
Q Consensus 79 ~~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~---~~~~~~~----~~~v~~~~~~~~~~~l~~~~~---d----~ 144 (323)
...++|.-=.|-.+. .|+..... .|+-|+..+. .+.+..| ...|..-..+++.++++..+- + |
T Consensus 104 ~~~e~VvfWkWis~~-~L~lVT~t--aVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G 180 (365)
T 2xzh_A 104 TMTDDVTFWKWISLN-TVALVTDN--AVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVG 180 (365)
T ss_dssp ECSSCEEEEEECSSS-EEEEEESS--EEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred ecCCccEEEEecCCC-eEEEEcCC--cEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccce
Confidence 346777777776544 44444343 7888977643 4444444 346777788888887765542 3 4
Q ss_pred ceEeeeEEeCCCCeeeEeecCCCceeEEEEecC---CCEEEEEeC---C-eEEEEeCCCC----------eeeecCC---
Q psy11524 145 KYKASFVWDTDGRQLYSSLTHDHPISSLAWAPG---GDMFAVGSY---N-TLRLCDKVGW----------SHSLDKP--- 204 (323)
Q Consensus 145 ~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~---~~~l~~~~~---~-~i~i~d~~~~----------~~~~~~~--- 204 (323)
.+. +|..+.+....+++|......+.+.-+ ...|+.+.. + .+++.++... ......+
T Consensus 181 ~mQ---LYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea 257 (365)
T 2xzh_A 181 AMQ---LYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 257 (365)
T ss_dssp EEE---EEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTC
T ss_pred eEE---EEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccc
Confidence 555 999998888888888766544443221 223444443 3 8999997422 1111222
Q ss_pred CCccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecc
Q psy11524 205 DTGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWS 283 (323)
Q Consensus 205 ~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~ 283 (323)
..+-..++..++.-..++.-+.-| |++||++++.++...++.. .+|...+-+... +-+...+..|.+....+.
T Consensus 258 ~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~--d~iF~ta~~~~~----~Gi~~Vnr~GqVl~v~v~ 331 (365)
T 2xzh_A 258 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG--ETIFVTAPHEAT----AGIIGVNRKGQVLSVCVE 331 (365)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS--SCEEEEEEEGGG----TEEEEEETTCEEEEEEEC
T ss_pred cCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCC--CceEEecccCCC----CcEEEEcCCCEEEEEEEC
Confidence 244567888888777899999999 9999999999988743333 445444444333 334444566665544443
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.35 E-value=0.35 Score=39.97 Aligned_cols=177 Identities=11% Similarity=0.067 Sum_probs=96.8
Q ss_pred CCCEEEEEEcCC---CCeEEEEeeC---C----eEEEEeCCCCc------eeE----eecc-CCCeEEEEECCCCCEEEE
Q psy11524 81 SPPVYSAAWSPD---SNKVLLTQAK---S----LVIKPLSPNNK------ATK----WQAH-DGLILKVAWCSSTDLILS 139 (323)
Q Consensus 81 ~~~v~~~~~sp~---~~~l~~~~~~---~----~~v~~~~~~~~------~~~----~~~~-~~~v~~~~~~~~~~~l~~ 139 (323)
......|+++|+ +..|+++... . ..|..++.... ... +... ......++|.|||.+.++
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt 151 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYIT 151 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEE
Confidence 457899999998 5566555432 1 35666654332 111 2211 112457999999987766
Q ss_pred EcC-------------CCceEeeeEEeCCCC--------eeeEeecCCCceeEEEEec-CCCEEEEEeC-C---eEEEEe
Q psy11524 140 GGE-------------DCKYKASFVWDTDGR--------QLYSSLTHDHPISSLAWAP-GGDMFAVGSY-N---TLRLCD 193 (323)
Q Consensus 140 ~~~-------------d~~i~~i~v~d~~~~--------~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~-~---~i~i~d 193 (323)
.+. .|.|. .++.+++ ....+...-.....++|+| +|+++++-.. + .|.+..
T Consensus 152 ~G~~~~~~~~~d~~~~~G~I~---ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~ 228 (354)
T 3a9g_A 152 TGDAADPRLAQDLSSLAGKIL---RVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL 228 (354)
T ss_dssp CCCTTCGGGGTCTTCCSSEEE---EECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC
T ss_pred ECCCCCCccccCCCCCCeEEE---EEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec
Confidence 442 14455 6666554 1122222223467899999 6765555433 2 355443
Q ss_pred CCC---C--------------eeeecCCCCccEEEEEEc-------CCCCEEEEEecCc-EEEEEcCCC-cee--eeecC
Q psy11524 194 KVG---W--------------SHSLDKPDTGSVYDLVWS-------NDATQIAGACANV-IHIFDISSS-SSS--NVTAP 245 (323)
Q Consensus 194 ~~~---~--------------~~~~~~~~~~~v~~~~~~-------~~~~~l~~~~~d~-i~iwd~~~~-~~~--~~~~~ 245 (323)
..+ + ..............++|. .+|.++++.-..+ |...++... +.. ..+ +
T Consensus 229 ~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~-~ 307 (354)
T 3a9g_A 229 KGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTF-F 307 (354)
T ss_dssp TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEE-C
T ss_pred CCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeee-c
Confidence 211 0 111110122357788884 4676666555556 888888753 332 221 2
Q ss_pred CCCccceEEEEEccCC
Q psy11524 246 LSHSHEITQLAVNQTG 261 (323)
Q Consensus 246 ~~~~~~v~~~~~~p~g 261 (323)
.+....+..+++.|+|
T Consensus 308 ~~~~~rp~~v~~~pDG 323 (354)
T 3a9g_A 308 KNVFGRLRDVVIDDDG 323 (354)
T ss_dssp TTTSCCEEEEEECTTS
T ss_pred cCCCCCeeEEEECCCC
Confidence 3334578899999996
No 318
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.33 E-value=0.4 Score=40.49 Aligned_cols=192 Identities=10% Similarity=0.098 Sum_probs=119.6
Q ss_pred CCCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc---eeEeecc----CCCeEEEEECCCCCEEEEEcC---C----Cc
Q psy11524 80 VSPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK---ATKWQAH----DGLILKVAWCSSTDLILSGGE---D----CK 145 (323)
Q Consensus 80 ~~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~---~~~~~~~----~~~v~~~~~~~~~~~l~~~~~---d----~~ 145 (323)
..++|.-=.|-.+. .|+..+.. .|+-|+..+. .+.+..| ...|..-..+++.++++..+- + |.
T Consensus 104 ~~e~VvfWkWis~~-~l~lVT~t--aVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~ 180 (494)
T 1bpo_A 104 MTDDVTFWKWISLN-TVALVTDN--AVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA 180 (494)
T ss_dssp CSSCCCEEEEEETT-EEEEECSS--EEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEE
T ss_pred cCCCceEEEecCCC-eEEEEcCC--eeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccce
Confidence 34555555554433 44444333 7888987643 4445444 346777788899998775442 3 45
Q ss_pred eEeeeEEeCCCCeeeEeecCCCceeEEEEecC---CCEEEEEeC---C-eEEEEeCCCC----------eeeecCC---C
Q psy11524 146 YKASFVWDTDGRQLYSSLTHDHPISSLAWAPG---GDMFAVGSY---N-TLRLCDKVGW----------SHSLDKP---D 205 (323)
Q Consensus 146 i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~---~~~l~~~~~---~-~i~i~d~~~~----------~~~~~~~---~ 205 (323)
+. +|..+.+....+++|......+...-+ ...|..+.. + .+++.++... ......+ .
T Consensus 181 mQ---LYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~ 257 (494)
T 1bpo_A 181 MQ---LYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ 257 (494)
T ss_dssp EE---EEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTST
T ss_pred EE---EeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccc
Confidence 55 999998888888888776655554322 124555554 3 8999997422 0111111 2
Q ss_pred CccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecc
Q psy11524 206 TGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWS 283 (323)
Q Consensus 206 ~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~ 283 (323)
.+-..++..++.-..+..-+.-| |++||++++.++...++. ..+|...+-+... +-+...+..|.+....+.
T Consensus 258 ~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs--~~~iF~t~~~~~~----~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 258 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRIS--GETIFVTAPHEAT----AGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECC--SSCEEEEEEETTT----TEEEEEETTCEEEEEEEC
T ss_pred cCceeEEEecccCCEEEEEecCceEEEEecccceeeeeeccc--CCceEEecccCCC----CcEEEEccCceEEEEEEc
Confidence 34577888999888899999999 999999999998874333 3444444444443 334444566665544443
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.65 E-value=0.64 Score=37.09 Aligned_cols=107 Identities=13% Similarity=0.122 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCC--ceEeeeEEeCCCCe---eeEeecCCC--ceeEEEEecCCCEEEEEeC------CeEEEEeCCCCee
Q psy11524 133 STDLILSGGEDC--KYKASFVWDTDGRQ---LYSSLTHDH--PISSLAWAPGGDMFAVGSY------NTLRLCDKVGWSH 199 (323)
Q Consensus 133 ~~~~l~~~~~d~--~i~~i~v~d~~~~~---~~~~~~~~~--~v~~~~~~p~~~~l~~~~~------~~i~i~d~~~~~~ 199 (323)
+++.++.|+.++ ....+++||+.... -..+..... .-.+++. .+++.++.|+. +.+.+||+.+..-
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 567777777542 22234499986444 333322111 1112222 25667777653 2588999875433
Q ss_pred eecC--CCCccEEEEEEcCCCCEEEEEecC-----c-EEEEEcCCCceee
Q psy11524 200 SLDK--PDTGSVYDLVWSNDATQIAGACAN-----V-IHIFDISSSSSSN 241 (323)
Q Consensus 200 ~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~-i~iwd~~~~~~~~ 241 (323)
.... .....-.+++. .+++.++.|+.+ . +.+||+.+.+...
T Consensus 141 ~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 141 SMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp EEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred EECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 2211 11111112222 266667776643 4 8899988776544
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.63 E-value=0.36 Score=41.43 Aligned_cols=105 Identities=13% Similarity=0.025 Sum_probs=57.9
Q ss_pred CccEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecCCC------CccceEEEEEccCCCCccceEEEEeCC----
Q psy11524 206 TGSVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAPLS------HSHEITQLAVNQTGSLQERHVAFIDKN---- 274 (323)
Q Consensus 206 ~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~------~~~~v~~~~~~p~g~~~d~~l~~~~~~---- 274 (323)
-.....++|.|+|+++++-...+ |++++..+++......+.. .......++|+|+-. .++.|.+....
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~-~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFK-NNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTT-TSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcC-cCCEEEEEEeccccC
Confidence 34577999999998777665556 8888765554322111221 245677899999510 01445444321
Q ss_pred ---------CCeEEEecccc-------------cCCCCccceeEEEEeeCCCeeEeeec
Q psy11524 275 ---------RDLYLSMWSHS-------------LDKPDTGSVYDLVWSSDATQIAGACA 311 (323)
Q Consensus 275 ---------~~~~~~~~~~~-------------~~~~~~~~v~~~~~s~~g~~l~s~~~ 311 (323)
..+..+..... +..........|+|.|||.+.++.++
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 12222222110 11111234689999999987776554
No 321
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.33 E-value=0.59 Score=38.40 Aligned_cols=103 Identities=12% Similarity=0.005 Sum_probs=61.8
Q ss_pred ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEe-------ecCCCceeEEEEecC----CCEEEEEe--C
Q psy11524 120 AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSS-------LTHDHPISSLAWAPG----GDMFAVGS--Y 186 (323)
Q Consensus 120 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~-------~~~~~~v~~~~~~p~----~~~l~~~~--~ 186 (323)
..-.....|+|.|||+++++-...|.|+ +++.++.....+ .........|+++|+ +.+.++-+ .
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~G~I~---~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDEATIT---RVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTCEEE---EECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred cCCCCceEEEEcCCCcEEEEEecCCEEE---EEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 3345678999999999877766689999 888753332222 123456889999995 44433322 2
Q ss_pred -CeEEEEeCCC---------Ceeee---cC-CCCccEEEEEEcCCCCEEEEEe
Q psy11524 187 -NTLRLCDKVG---------WSHSL---DK-PDTGSVYDLVWSNDATQIAGAC 225 (323)
Q Consensus 187 -~~i~i~d~~~---------~~~~~---~~-~~~~~v~~~~~~~~~~~l~~~~ 225 (323)
+.|.-|.... ..... +. ........++|.|||.+.++.+
T Consensus 106 ~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 106 DNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp SEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred CCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 3666665543 11111 11 1112346799999998666644
No 322
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.20 E-value=2.4 Score=41.71 Aligned_cols=207 Identities=8% Similarity=0.034 Sum_probs=114.0
Q ss_pred EEEEeCCCCceeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeEEEEecCCCEEEEE
Q psy11524 105 VIKPLSPNNKATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISSLAWAPGGDMFAVG 184 (323)
Q Consensus 105 ~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~~~~~p~~~~l~~~ 184 (323)
.|.+.|+..+... ...+-...+.-.+|..+.+|.-. ..++. |+|++.+....-.....+|.-=.|- +.+.|+..
T Consensus 49 ~vvIidl~~~~~~-~rrpi~AdsAIMnP~~~iiALra-g~~lQ---iFnl~~k~klks~~~~e~VvfWkWi-s~~~l~lV 122 (1630)
T 1xi4_A 49 QVVIIDMNDPSNP-IRRPISADSAIMNPASKVIALKA-GKTLQ---IFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALV 122 (1630)
T ss_pred eEEEEECCCCCCc-ccccccchhhccCCCcceEEEec-CCeEE---EeehHHhhhhcccccCCCceEEEec-CCCeeEEE
Confidence 5666676654211 11112223445688777666654 67888 9999644333222234456655665 45567777
Q ss_pred eCCeEEEEeCCCC--eeeecCCC----CccEEEEEEcCCCCEEEEEe-------cCc-EEEEEcCCCceeeeecCCCCcc
Q psy11524 185 SYNTLRLCDKVGW--SHSLDKPD----TGSVYDLVWSNDATQIAGAC-------ANV-IHIFDISSSSSSNVTAPLSHSH 250 (323)
Q Consensus 185 ~~~~i~i~d~~~~--~~~~~~~~----~~~v~~~~~~~~~~~l~~~~-------~d~-i~iwd~~~~~~~~~~~~~~~~~ 250 (323)
+...|+-|++.+. +...+.-| ...|..-..+++.++++..+ -.| +.+|..+.+.... +.+|.+
T Consensus 123 T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~---iegha~ 199 (1630)
T 1xi4_A 123 TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP---IEGHAA 199 (1630)
T ss_pred cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchh---hhHhHh
Confidence 7779999998653 33333323 34577788889999887544 246 8999877654322 344443
Q ss_pred ceEEEEEccCCCCccceEEEEeCC----CCeEEEecccc--------------cCCC--CccceeEEEEeeCCCeeEeee
Q psy11524 251 EITQLAVNQTGSLQERHVAFIDKN----RDLYLSMWSHS--------------LDKP--DTGSVYDLVWSSDATQIAGAC 310 (323)
Q Consensus 251 ~v~~~~~~p~g~~~d~~l~~~~~~----~~~~~~~~~~~--------------~~~~--~~~~v~~~~~s~~g~~l~s~~ 310 (323)
....+...... .+..+.+.... +++.+.++... .++. ...-..++..|+.-..+...+
T Consensus 200 ~F~~~~~~~~~--~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~it 277 (1630)
T 1xi4_A 200 SFAQFKMEGNA--EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT 277 (1630)
T ss_pred hhheeccCCCC--CCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEe
Confidence 33222221110 00112211111 23344443221 0000 122345677788778888889
Q ss_pred cCCeEEEEEeec
Q psy11524 311 ANGSLLLGTIIQ 322 (323)
Q Consensus 311 ~dg~i~~~~l~~ 322 (323)
.-|.|++||+.+
T Consensus 278 k~G~~~~~d~~t 289 (1630)
T 1xi4_A 278 KYGYIHLYDLET 289 (1630)
T ss_pred cCceEEEEeccc
Confidence 999999999853
No 323
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.60 E-value=3.5 Score=39.92 Aligned_cols=175 Identities=9% Similarity=0.046 Sum_probs=99.2
Q ss_pred CCEEEEEc----------CCCceEeeeEEeCCCCeeeEe--ecCCCceeEEEEecCCCEEEEEeCCeEEEEeCCCC-eee
Q psy11524 134 TDLILSGG----------EDCKYKASFVWDTDGRQLYSS--LTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGW-SHS 200 (323)
Q Consensus 134 ~~~l~~~~----------~d~~i~~i~v~d~~~~~~~~~--~~~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~-~~~ 200 (323)
..+++.|. ..|.|. ++++.+..+..+ ...++++++++-- +| +|+++-...+++|++... .+.
T Consensus 844 ~~~lvVGTa~~~~~e~~~~~Gri~---vf~v~~~kL~lv~~~~v~g~v~al~~~-~g-~Lla~ig~~l~vy~l~~~~~L~ 918 (1158)
T 3ei3_A 844 NTYFIVGTAMVYPEEAEPKQGRIV---VFQYSDGKLQTVAEKEVKGAVYSMVEF-NG-KLLASINSTVRLYEWTTEKELR 918 (1158)
T ss_dssp CCEEEEEEEECCTTCSSCCCEEEE---EEEEETTEEEEEEEEEESSCEEEEEEE-TT-EEEEEETTEEEEEEECTTSCEE
T ss_pred CEEEEEEeeecCCCCCCCCceEEE---EEEEECCEEEEEEEEEcCCcCEEEeee-CC-EEEEEcCCEEEEEECCCCceEE
Confidence 36777775 246777 998864444433 2346778887633 45 566666569999998743 222
Q ss_pred ecCCCCccEEEEEEcCCCCEEEEEecCc-EEE--EEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCe
Q psy11524 201 LDKPDTGSVYDLVWSNDATQIAGACANV-IHI--FDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDL 277 (323)
Q Consensus 201 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~i--wd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~ 277 (323)
....+-..+..+.....+++++.|..-. +.+ |+...++..... -......++++.|-.+ .++...|..+.+
T Consensus 919 ~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a-~D~~~~~vta~~~ld~-----~t~l~aD~~gNl 992 (1158)
T 3ei3_A 919 TECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIA-RDFNPNWMSAVEILDD-----DNFLGAENAFNL 992 (1158)
T ss_dssp EEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEEE-ECCSCBCEEEEEEEET-----TEEEEEETTSEE
T ss_pred EEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEE-eecccccEEEEEEEcc-----CcEEEEcCCCcE
Confidence 1111111122223333567888888766 555 454444333221 2335567888888755 477778888888
Q ss_pred EEEecccc------------cCCCC-ccceeEEE---EeeC---------CCeeEeeecCCeEEEEE
Q psy11524 278 YLSMWSHS------------LDKPD-TGSVYDLV---WSSD---------ATQIAGACANGSLLLGT 319 (323)
Q Consensus 278 ~~~~~~~~------------~~~~~-~~~v~~~~---~s~~---------g~~l~s~~~dg~i~~~~ 319 (323)
.+...... ....| +..|+++. +.+. ...++-++.+|.|-+.-
T Consensus 993 ~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~~~~~~il~~T~~GsIg~l~ 1059 (1158)
T 3ei3_A 993 FVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGSVLFGTVNGMIGLVT 1059 (1158)
T ss_dssp EEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------CEEEEEEEEETTSCEEEEE
T ss_pred EEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccccccceEEEEecCCEEEEEE
Confidence 77665442 00011 34566654 2222 23577788888887653
No 324
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.24 E-value=1.7 Score=34.77 Aligned_cols=106 Identities=16% Similarity=0.053 Sum_probs=55.1
Q ss_pred CCCEEEEEcC----CCc--eEeeeEEeCCCCeeeEeecCCCc--eeEEEEecCCCEEEEEeC------CeEEEEeCCCCe
Q psy11524 133 STDLILSGGE----DCK--YKASFVWDTDGRQLYSSLTHDHP--ISSLAWAPGGDMFAVGSY------NTLRLCDKVGWS 198 (323)
Q Consensus 133 ~~~~l~~~~~----d~~--i~~i~v~d~~~~~~~~~~~~~~~--v~~~~~~p~~~~l~~~~~------~~i~i~d~~~~~ 198 (323)
++..++.|+. ++. ...+++||+....-..+.....+ -.+++. -++++++.|+. +.+.+||+.+..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 5667777765 221 12344899865554444321111 112222 25667777653 358889987654
Q ss_pred eeecCCCC---ccEEEEEEcCCCCEEEEEecC-----c-EEEEEcCCCceee
Q psy11524 199 HSLDKPDT---GSVYDLVWSNDATQIAGACAN-----V-IHIFDISSSSSSN 241 (323)
Q Consensus 199 ~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d-----~-i~iwd~~~~~~~~ 241 (323)
-....... .....+.+ +++.++.|+.+ . +.+||+.+.+...
T Consensus 149 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 149 WHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred EeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 43322211 11122222 56666766643 4 8899988776443
No 325
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.17 E-value=1.7 Score=34.56 Aligned_cols=107 Identities=12% Similarity=0.052 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCC--ceEeeeEEeCCCCeeeEeecCCCc--eeEEEEecCCCEEEEEeC------CeEEEEeCCCCeeeec
Q psy11524 133 STDLILSGGEDC--KYKASFVWDTDGRQLYSSLTHDHP--ISSLAWAPGGDMFAVGSY------NTLRLCDKVGWSHSLD 202 (323)
Q Consensus 133 ~~~~l~~~~~d~--~i~~i~v~d~~~~~~~~~~~~~~~--v~~~~~~p~~~~l~~~~~------~~i~i~d~~~~~~~~~ 202 (323)
++..++.|+.++ ....+++||.....-..+.....+ -.+++. -+++.++.|+. +.+.+||+.+..-...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 566777777543 223445899876554444322211 112222 25677777764 1477889876543322
Q ss_pred CCCCc--cEEEEEEcCCCCEEEEEec-------Cc-EEEEEcCCCceee
Q psy11524 203 KPDTG--SVYDLVWSNDATQIAGACA-------NV-IHIFDISSSSSSN 241 (323)
Q Consensus 203 ~~~~~--~v~~~~~~~~~~~l~~~~~-------d~-i~iwd~~~~~~~~ 241 (323)
..... .-.+++. -+++.++.|+. -. +.+||+.+.+...
T Consensus 140 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~ 187 (302)
T 2xn4_A 140 APMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTY 187 (302)
T ss_dssp CCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEE
T ss_pred CCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEE
Confidence 22111 1112222 25666666553 24 8899988776444
No 326
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.92 E-value=1.7 Score=34.56 Aligned_cols=145 Identities=6% Similarity=-0.026 Sum_probs=73.5
Q ss_pred CCCeEEEEeeCC----eEEEEeCCCCce-eEee---ccCCCeEEEEECCCCCEEEEEcCCCc----eEeeeEEeCCCCee
Q psy11524 92 DSNKVLLTQAKS----LVIKPLSPNNKA-TKWQ---AHDGLILKVAWCSSTDLILSGGEDCK----YKASFVWDTDGRQL 159 (323)
Q Consensus 92 ~~~~l~~~~~~~----~~v~~~~~~~~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~----i~~i~v~d~~~~~~ 159 (323)
+++.+++|+.+. ..++.||..... ..+. ........+.+ +++.++.|+.++. ...+++||+....-
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 566777776442 357788876652 1221 11111222222 5667777765332 22344999875544
Q ss_pred eEeecCCCc--eeEEEEecCCCEEEEEeC------CeEEEEeCCCCeeeecCCCCc--cEEEEEEcCCCCEEEEEecC--
Q psy11524 160 YSSLTHDHP--ISSLAWAPGGDMFAVGSY------NTLRLCDKVGWSHSLDKPDTG--SVYDLVWSNDATQIAGACAN-- 227 (323)
Q Consensus 160 ~~~~~~~~~--v~~~~~~p~~~~l~~~~~------~~i~i~d~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d-- 227 (323)
..+.....+ -.+++. -++++++.|+. +.+.+||+.+..-........ .-..++. .+++.++.|+.+
T Consensus 186 ~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~~~ 263 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGV-LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDDGS 263 (302)
T ss_dssp EEECCCSSCCBSCEEEE-ETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBCSS
T ss_pred EECCCCccccccccEEE-ECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcCCC
Confidence 443322111 112222 25677777764 258899987654333222111 1111222 256677776643
Q ss_pred ---c-EEEEEcCCCcee
Q psy11524 228 ---V-IHIFDISSSSSS 240 (323)
Q Consensus 228 ---~-i~iwd~~~~~~~ 240 (323)
. +.+||+.+.+..
T Consensus 264 ~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 264 CNLASVEYYNPTTDKWT 280 (302)
T ss_dssp SBCCCEEEEETTTTEEE
T ss_pred cccccEEEEcCCCCeEE
Confidence 3 788898876544
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.88 E-value=2.2 Score=34.85 Aligned_cols=93 Identities=11% Similarity=0.137 Sum_probs=45.4
Q ss_pred CCCeEEEEeeCCeEEEEeCCCC--c-eeEeeccC----CCeEEEEECCCCCEEEEEcC-C---C---ceEeeeEEeCCCC
Q psy11524 92 DSNKVLLTQAKSLVIKPLSPNN--K-ATKWQAHD----GLILKVAWCSSTDLILSGGE-D---C---KYKASFVWDTDGR 157 (323)
Q Consensus 92 ~~~~l~~~~~~~~~v~~~~~~~--~-~~~~~~~~----~~v~~~~~~~~~~~l~~~~~-d---~---~i~~i~v~d~~~~ 157 (323)
+++.+++|+.+...++.+|... . -..+.... .....+.+ ++++++.|+. + + ....+++||+...
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 5666666665545688888763 2 22221111 11222222 5677777765 2 1 1224459998655
Q ss_pred eeeEeecCC-Cc-eeEEEEecCCCEEEEEeC
Q psy11524 158 QLYSSLTHD-HP-ISSLAWAPGGDMFAVGSY 186 (323)
Q Consensus 158 ~~~~~~~~~-~~-v~~~~~~p~~~~l~~~~~ 186 (323)
.-..+.... .+ ....+...++++++.|+.
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 127 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGV 127 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECC
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCc
Confidence 444433222 11 111122256777777764
No 328
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=93.84 E-value=1.1 Score=35.77 Aligned_cols=144 Identities=14% Similarity=0.010 Sum_probs=73.4
Q ss_pred CCCeEEEEeeCC----eEEEEeCCCCce-eEee---ccCCCeEEEEECCCCCEEEEEcCCCc--eEeeeEEeCCCCeeeE
Q psy11524 92 DSNKVLLTQAKS----LVIKPLSPNNKA-TKWQ---AHDGLILKVAWCSSTDLILSGGEDCK--YKASFVWDTDGRQLYS 161 (323)
Q Consensus 92 ~~~~l~~~~~~~----~~v~~~~~~~~~-~~~~---~~~~~v~~~~~~~~~~~l~~~~~d~~--i~~i~v~d~~~~~~~~ 161 (323)
+++.+++|+.+. ..++.+|..... ..+. ........+.+ +++.++.|+.++. ...+++||+....-..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 566666665332 357888876652 1121 11111222222 5677777775532 2234499987655444
Q ss_pred eecCCCc--eeEEEEecCCCEEEEEeC------CeEEEEeCCCCeeeecCCCC---ccEEEEEEcCCCCEEEEEecC---
Q psy11524 162 SLTHDHP--ISSLAWAPGGDMFAVGSY------NTLRLCDKVGWSHSLDKPDT---GSVYDLVWSNDATQIAGACAN--- 227 (323)
Q Consensus 162 ~~~~~~~--v~~~~~~p~~~~l~~~~~------~~i~i~d~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~d--- 227 (323)
+.....+ -.+++. -++++++.|+. +.+.+||+.+..-....... .....+. -+++.++.|+.+
T Consensus 190 ~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~ 266 (301)
T 2vpj_A 190 VTPMATKRSGAGVAL-LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNS 266 (301)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSS
T ss_pred CCCCCcccccceEEE-ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEE--ECCEEEEEcCcCCCc
Confidence 4322221 112222 25667777664 25889998765443322211 1112222 256666776654
Q ss_pred --c-EEEEEcCCCcee
Q psy11524 228 --V-IHIFDISSSSSS 240 (323)
Q Consensus 228 --~-i~iwd~~~~~~~ 240 (323)
. +.+||.++.+..
T Consensus 267 ~~~~v~~yd~~~~~W~ 282 (301)
T 2vpj_A 267 LLSSIECYDPIIDSWE 282 (301)
T ss_dssp BEEEEEEEETTTTEEE
T ss_pred ccccEEEEcCCCCeEE
Confidence 4 778888776543
No 329
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.47 E-value=6.5 Score=38.84 Aligned_cols=187 Identities=12% Similarity=0.071 Sum_probs=107.2
Q ss_pred EEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCC--CeeeEe
Q psy11524 87 AAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDG--RQLYSS 162 (323)
Q Consensus 87 ~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~--~~~~~~ 162 (323)
.-.+|..+.+|.-+ +..+.++++..+ +.... ....|.-=.|-.+. .|+..+ +..|. -|++.+ .+...+
T Consensus 71 AIMnP~~~iiALra--g~~lQiFnl~~k~klks~~-~~e~VvfWkWis~~-~l~lVT-~~aVy---HW~~~~~s~P~k~f 142 (1630)
T 1xi4_A 71 AIMNPASKVIALKA--GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLN-TVALVT-DNAVY---HWSMEGESQPVKMF 142 (1630)
T ss_pred hccCCCcceEEEec--CCeEEEeehHHhhhhcccc-cCCCceEEEecCCC-eeEEEc-CCeEE---EeccCCCCccHHHH
Confidence 44577777666543 458889988765 33332 23445545665443 344333 44577 999953 444444
Q ss_pred ecC----CCceeEEEEecCCCEEEEEeC--------CeEEEEeCCCCeeeecCCCCccEEEEEEc--CC-CCEEEEEec-
Q psy11524 163 LTH----DHPISSLAWAPGGDMFAVGSY--------NTLRLCDKVGWSHSLDKPDTGSVYDLVWS--ND-ATQIAGACA- 226 (323)
Q Consensus 163 ~~~----~~~v~~~~~~p~~~~l~~~~~--------~~i~i~d~~~~~~~~~~~~~~~v~~~~~~--~~-~~~l~~~~~- 226 (323)
..| ...|.+-..+++.++++..+- |.+.+|.......+.+.+|.+....+... +. ...++.+..
T Consensus 143 dR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~ 222 (1630)
T 1xi4_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRG 222 (1630)
T ss_pred hcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEec
Confidence 333 456777788888888664431 47888988776666677776655444432 11 223333322
Q ss_pred --Cc-EEEEEcCCC---ceee-----eecCCC--CccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc
Q psy11524 227 --NV-IHIFDISSS---SSSN-----VTAPLS--HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS 285 (323)
Q Consensus 227 --d~-i~iwd~~~~---~~~~-----~~~~~~--~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~ 285 (323)
++ ++|.++... .+.. .+.+.. ...-..++..++.- +.+.+...-|.+.++++.++
T Consensus 223 ~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~----g~iy~itk~G~~~~~d~~t~ 290 (1630)
T 1xi4_A 223 QAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH----DVVFLITKYGYIHLYDLETG 290 (1630)
T ss_pred CCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecccc----CEEEEEecCceEEEEecccc
Confidence 25 899887543 1110 000111 11222345556554 78888888888999998886
No 330
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.33 E-value=4.6 Score=36.73 Aligned_cols=148 Identities=14% Similarity=0.124 Sum_probs=80.3
Q ss_pred CCCCeEEEEeeCC---eEEEEeCCCCc-eeEee-c--------cCCCeEEEEECCCCCEEEEEcCCC---ceEeeeEEeC
Q psy11524 91 PDSNKVLLTQAKS---LVIKPLSPNNK-ATKWQ-A--------HDGLILKVAWCSSTDLILSGGEDC---KYKASFVWDT 154 (323)
Q Consensus 91 p~~~~l~~~~~~~---~~v~~~~~~~~-~~~~~-~--------~~~~v~~~~~~~~~~~l~~~~~d~---~i~~i~v~d~ 154 (323)
.++..+++||.+. ..++.||.... -..+. . ....-..+.+..+++.++.|+.++ ....+++||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 4566667666431 24677776655 22222 1 111223333332677888887653 2345669998
Q ss_pred CCCeeeEeecCCCc--eeEEEEecCCCEEEEEeCC---eEEEEeCCCCeeeecCC------CCccEEEEEEcCC-CCEEE
Q psy11524 155 DGRQLYSSLTHDHP--ISSLAWAPGGDMFAVGSYN---TLRLCDKVGWSHSLDKP------DTGSVYDLVWSND-ATQIA 222 (323)
Q Consensus 155 ~~~~~~~~~~~~~~--v~~~~~~p~~~~l~~~~~~---~i~i~d~~~~~~~~~~~------~~~~v~~~~~~~~-~~~l~ 222 (323)
....-..+.....+ -.+.+.-.+++.++.|+.+ .+.+||..+..-..... .......+.+..+ ++.++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 75544433222211 1223332478888888763 68999987654443321 1112233555655 66677
Q ss_pred EEec-------Cc-EEEEEcCCCc
Q psy11524 223 GACA-------NV-IHIFDISSSS 238 (323)
Q Consensus 223 ~~~~-------d~-i~iwd~~~~~ 238 (323)
.|+. -. +.+||+.+.+
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ECCcCCCCCeeeCcEEEEEccCCc
Confidence 7764 14 8899988876
No 331
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.89 E-value=2.9 Score=33.25 Aligned_cols=146 Identities=13% Similarity=0.065 Sum_probs=73.8
Q ss_pred CCCeEEEEeeC---CeEEEEeCCCCce-eEeec---cCCCeEEEEECCCCCEEEEEcCC-C--ceEeeeEEeCCCCeeeE
Q psy11524 92 DSNKVLLTQAK---SLVIKPLSPNNKA-TKWQA---HDGLILKVAWCSSTDLILSGGED-C--KYKASFVWDTDGRQLYS 161 (323)
Q Consensus 92 ~~~~l~~~~~~---~~~v~~~~~~~~~-~~~~~---~~~~v~~~~~~~~~~~l~~~~~d-~--~i~~i~v~d~~~~~~~~ 161 (323)
+++.+++|+.+ ...++.+|..... ..+.. .......+.+ +++.++.|+.+ + ....+++||+....-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56666666543 1367888877652 22211 1112222222 56777777754 1 12234499987655444
Q ss_pred eecCCCc--eeEEEEecCCCEEEEEeC----------CeEEEEeCCCCeeeecCCCCc--cEEEEEEcCCCCEEEEEecC
Q psy11524 162 SLTHDHP--ISSLAWAPGGDMFAVGSY----------NTLRLCDKVGWSHSLDKPDTG--SVYDLVWSNDATQIAGACAN 227 (323)
Q Consensus 162 ~~~~~~~--v~~~~~~p~~~~l~~~~~----------~~i~i~d~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d 227 (323)
+.....+ -.+++. -++++++.|+. +.+.+||+.+..-........ .-.+++.. +++.++.|+.+
T Consensus 133 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~ 210 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVGGQN 210 (306)
T ss_dssp ECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCEE
T ss_pred CCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEeCCC
Confidence 4322111 112222 25666666652 348899987654433322211 11122222 56666666542
Q ss_pred -----c-EEEEEcCCCceee
Q psy11524 228 -----V-IHIFDISSSSSSN 241 (323)
Q Consensus 228 -----~-i~iwd~~~~~~~~ 241 (323)
. +.+||+.+.+-..
T Consensus 211 ~~~~~~~~~~yd~~~~~W~~ 230 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNEWKM 230 (306)
T ss_dssp TTEEBCCEEEEETTTTEEEE
T ss_pred CCCCCceEEEeeCCCCcEEE
Confidence 3 8899988875443
No 332
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.74 E-value=5.9 Score=36.35 Aligned_cols=214 Identities=12% Similarity=0.117 Sum_probs=121.1
Q ss_pred CCCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCceeEe--eccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCe
Q psy11524 81 SPPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNKATKW--QAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQ 158 (323)
Q Consensus 81 ~~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~ 158 (323)
...|.++.-..+|. |-++.. .| +..+|........ ......|.++.. .+|. |..++.+ .+. .+|.....
T Consensus 62 ~~~i~~i~~d~~g~-lWigT~-~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g~-lWigt~~-Gl~---~~~~~~~~ 132 (758)
T 3ott_A 62 NTRIYCGVIIDNTY-LYMGTD-NG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGDT-LWLGALN-GLY---TYQLQSRK 132 (758)
T ss_dssp SSCEEEEEEETTTE-EEEEET-TE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETTE-EEEEETT-EEE---EEETTTCC
T ss_pred CceEEEEEEcCCCc-EEEEeC-CC-eEEEeCCCCEEECcccCCCceEEEEEe-cCCc-EEEEcCC-cce---eEeCCCCe
Confidence 45788988877764 444544 34 5677765442111 112235666654 3554 4445544 566 88886555
Q ss_pred eeEeec-----CCCceeEEEEecCCCEEEEEeCCeEEEEeCCCCeeeecC-C-----CCccEEEEEEcCCCCEEEEEecC
Q psy11524 159 LYSSLT-----HDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHSLDK-P-----DTGSVYDLVWSNDATQIAGACAN 227 (323)
Q Consensus 159 ~~~~~~-----~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~~~~~~~-~-----~~~~v~~~~~~~~~~~l~~~~~d 227 (323)
...+.. ....|.++...++|.+.+ ++.+-+..+|..+....... . ....|.++...+++..|..++.+
T Consensus 133 ~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~ 211 (758)
T 3ott_A 133 LTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEG 211 (758)
T ss_dssp EEEECHHHHCCSCSCEEEEEECTTCCEEE-EETTEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEE
T ss_pred EEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECC
Confidence 544411 234578888877777655 44556778887655433221 1 12248888888877665566643
Q ss_pred cEEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc-----------cCCCCccceeE
Q psy11524 228 VIHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS-----------LDKPDTGSVYD 296 (323)
Q Consensus 228 ~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-----------~~~~~~~~v~~ 296 (323)
|+..+|..+++.... .......|.++...++| .|.++.. +.+.+++.... ........|.+
T Consensus 212 Gl~~~~~~~~~~~~~--~~l~~~~i~~i~~d~~g-----~lWigT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 283 (758)
T 3ott_A 212 YLFQYFPSTGQIKQT--EAFHNNSIKSLALDGNG-----DLLAGTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWN 283 (758)
T ss_dssp EEEEEETTTTEEEEE--EEEEEEEEEEEEECTTC-----CEEEEET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEE
T ss_pred CCeEEcCCCCeEEec--cCCCCCeEEEEEEcCCC-----CEEEEeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEE
Confidence 488999877654322 11123457777776664 5666653 44555554332 01122356888
Q ss_pred EEEeeCCCeeEeeecCC
Q psy11524 297 LVWSSDATQIAGACANG 313 (323)
Q Consensus 297 ~~~s~~g~~l~s~~~dg 313 (323)
+....+|.+-+ |+..|
T Consensus 284 i~~D~~g~lWi-GT~~G 299 (758)
T 3ott_A 284 IFADQEHNIWL-GTDYG 299 (758)
T ss_dssp EEECTTCCEEE-EESSS
T ss_pred EEEcCCCCEEE-EeCCc
Confidence 88877776443 33445
No 333
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=92.45 E-value=0.85 Score=39.85 Aligned_cols=70 Identities=4% Similarity=-0.024 Sum_probs=50.7
Q ss_pred CceeEEEEecCCCEEEEEeC-C-eEEEEeCCCC------ee-------eecCCCCccEEEEEEcCCCCEEEEEecCc-EE
Q psy11524 167 HPISSLAWAPGGDMFAVGSY-N-TLRLCDKVGW------SH-------SLDKPDTGSVYDLVWSNDATQIAGACANV-IH 230 (323)
Q Consensus 167 ~~v~~~~~~p~~~~l~~~~~-~-~i~i~d~~~~------~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~ 230 (323)
.....+.++|||+++++++. . ++.++|.+.. .+ .......-.....+|.++|....+..-|. |.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 44567889999999999998 5 9999997631 11 11112344678899999995555566788 99
Q ss_pred EEEcCC
Q psy11524 231 IFDISS 236 (323)
Q Consensus 231 iwd~~~ 236 (323)
-|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999764
No 334
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.87 E-value=4 Score=32.44 Aligned_cols=143 Identities=13% Similarity=0.134 Sum_probs=69.9
Q ss_pred eEEEEeeC-CeEEEEeCCCCce-eEe---eccCCCeEEEEECCCCCEEEEEcCC-CceEeeeEEeCCCCeeeEeecCCCc
Q psy11524 95 KVLLTQAK-SLVIKPLSPNNKA-TKW---QAHDGLILKVAWCSSTDLILSGGED-CKYKASFVWDTDGRQLYSSLTHDHP 168 (323)
Q Consensus 95 ~l~~~~~~-~~~v~~~~~~~~~-~~~---~~~~~~v~~~~~~~~~~~l~~~~~d-~~i~~i~v~d~~~~~~~~~~~~~~~ 168 (323)
.+++|+.. ...++.||..... ..+ .........+.+ ++..++.|+.+ .....+++||+....-..+.....+
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 44455432 2357777766552 111 111112222222 56677777755 2223444999876554444322211
Q ss_pred -e-eEEEEecCCCEEEEEeC-------CeEEEEeCCCCeeeecCCCCc--cEEEEEEcCCCCEEEEEec---------Cc
Q psy11524 169 -I-SSLAWAPGGDMFAVGSY-------NTLRLCDKVGWSHSLDKPDTG--SVYDLVWSNDATQIAGACA---------NV 228 (323)
Q Consensus 169 -v-~~~~~~p~~~~l~~~~~-------~~i~i~d~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~---------d~ 228 (323)
. .+++ .-++++++.|+. +.+.+||..+..-........ .-.+++. -+++.++.|+. -.
T Consensus 92 r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 92 RDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp CBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECC
T ss_pred ccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccc
Confidence 1 1222 225667676653 258899987654332221111 1112222 25666666653 34
Q ss_pred -EEEEEcCCCceee
Q psy11524 229 -IHIFDISSSSSSN 241 (323)
Q Consensus 229 -i~iwd~~~~~~~~ 241 (323)
+.+||..+.+...
T Consensus 170 ~~~~yd~~~~~W~~ 183 (306)
T 3ii7_A 170 SCEVYDPATETWTE 183 (306)
T ss_dssp CEEEEETTTTEEEE
T ss_pred eEEEeCCCCCeEEE
Confidence 8899998876444
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.80 E-value=4.2 Score=32.54 Aligned_cols=136 Identities=10% Similarity=0.029 Sum_probs=69.2
Q ss_pred EEEEeCCCCceeEeec---cCCCeEEEEECCCCCEEEEEcC-------CCce-EeeeEEeCCCCeeeEeecCCCce--eE
Q psy11524 105 VIKPLSPNNKATKWQA---HDGLILKVAWCSSTDLILSGGE-------DCKY-KASFVWDTDGRQLYSSLTHDHPI--SS 171 (323)
Q Consensus 105 ~v~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~~~~~-------d~~i-~~i~v~d~~~~~~~~~~~~~~~v--~~ 171 (323)
.+..||.....-.... ............+++.++.|+. ...+ ..+++||.....-..+.....+- .+
T Consensus 14 ~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 93 (315)
T 4asc_A 14 GAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFG 93 (315)
T ss_dssp EEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCE
T ss_pred ceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhcee
Confidence 6778887766322211 1122233333457788888873 1111 23558998755544443222211 12
Q ss_pred EEEecCCCEEEEEe------C---CeEEEEeCCCCeeeecCCCCc-cEEEEEEcCCCCEEEEEec------Cc-EEEEEc
Q psy11524 172 LAWAPGGDMFAVGS------Y---NTLRLCDKVGWSHSLDKPDTG-SVYDLVWSNDATQIAGACA------NV-IHIFDI 234 (323)
Q Consensus 172 ~~~~p~~~~l~~~~------~---~~i~i~d~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~~~~~------d~-i~iwd~ 234 (323)
++.. +++.++.|+ . +.+.+||+.+..-........ .....+...+++.++.|+. -. +.+||.
T Consensus 94 ~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~ 172 (315)
T 4asc_A 94 LGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDP 172 (315)
T ss_dssp EEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEET
T ss_pred EEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeC
Confidence 2222 566667666 1 258899987654333222111 1111122235666677765 13 889998
Q ss_pred CCCceee
Q psy11524 235 SSSSSSN 241 (323)
Q Consensus 235 ~~~~~~~ 241 (323)
.+.+-..
T Consensus 173 ~~~~W~~ 179 (315)
T 4asc_A 173 KKFEWKE 179 (315)
T ss_dssp TTTEEEE
T ss_pred CCCeEEE
Confidence 8775443
No 336
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=91.65 E-value=10 Score=36.77 Aligned_cols=266 Identities=14% Similarity=0.102 Sum_probs=126.7
Q ss_pred cceeEeeEeccC--Ccceeeeeecccc-ccccceeee----------cCCCCCEEEEEEcC--CCCeEEEEeeCCeEEE-
Q psy11524 44 DGTVINYPISPY--ISVLHSYAASHSW-PQALSLCRT----------LNVSPPVYSAAWSP--DSNKVLLTQAKSLVIK- 107 (323)
Q Consensus 44 ~~~v~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~----------~~~~~~v~~~~~sp--~~~~l~~~~~~~~~v~- 107 (323)
...|.++.+.|. +..-..+++-|.| |.+.+++.. +.......++.+.. ...+|..|-.+ |.+.
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~d-G~l~~ 631 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGD-GALFY 631 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETT-SEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCC-CeEEE
Confidence 457888888753 4444567778888 666665431 21223344444332 23456655555 4543
Q ss_pred -EeCCCCc----eeEeeccCCCeEEEEECCCCC-EEEEEcCCCceEeeeEEeCCCCeeeEeecCCCceeE-EEEecC--C
Q psy11524 108 -PLSPNNK----ATKWQAHDGLILKVAWCSSTD-LILSGGEDCKYKASFVWDTDGRQLYSSLTHDHPISS-LAWAPG--G 178 (323)
Q Consensus 108 -~~~~~~~----~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~i~v~d~~~~~~~~~~~~~~~v~~-~~~~p~--~ 178 (323)
.+|.... .++..-...++.-..+...+. .+++++ +.... ++.-+++....-. .-..+.. ..|+.. .
T Consensus 632 ~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s-~rp~l---iy~~~~~l~~s~l-~~~~v~~~~~F~se~~~ 706 (1158)
T 3ei3_A 632 FGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACS-DRPTV---IYSSNHKLVFSNV-NLKEVNYMCPLNSDGYP 706 (1158)
T ss_dssp EEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEES-SSCEE---EEESSSSEEEEEB-SSSCCCEEEEECCSSST
T ss_pred EEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEEC-CCCEE---EEEcCCceEEecc-ChHHhceEeccCcccCC
Confidence 3343222 111111233444333433333 333333 33333 4443433222111 1122322 345432 2
Q ss_pred CEEEEEeCCeEEEEeCCC--CeeeecCCCCccEEEEEEcCCCCEEEEEec------------------------------
Q psy11524 179 DMFAVGSYNTLRLCDKVG--WSHSLDKPDTGSVYDLVWSNDATQIAGACA------------------------------ 226 (323)
Q Consensus 179 ~~l~~~~~~~i~i~d~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------------------ 226 (323)
.-++..+.+.++|..+.. .......+....++.++++|+.+.++.+..
T Consensus 707 ~g~v~~~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1158)
T 3ei3_A 707 DSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSS 786 (1158)
T ss_dssp TEEEEECSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCC
T ss_pred CcEEEEcCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhccccc
Confidence 345555555677766532 111122224567888888887665443321
Q ss_pred -------------------Cc-EEEEEcCCCceeeeecCCCCccceEEE---EEccCCCCccceEEEEe----------C
Q psy11524 227 -------------------NV-IHIFDISSSSSSNVTAPLSHSHEITQL---AVNQTGSLQERHVAFID----------K 273 (323)
Q Consensus 227 -------------------d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~---~~~p~g~~~d~~l~~~~----------~ 273 (323)
-. |++.|..+.+.+..+.+.... .+.++ .|..+. ..+++++. .
T Consensus 787 ~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE-~~~sv~~v~~~~~~---~~~lvVGTa~~~~~e~~~~ 862 (1158)
T 3ei3_A 787 KLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNE-YALSLVSCKLGKDP---NTYFIVGTAMVYPEEAEPK 862 (1158)
T ss_dssp CCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTE-EEEEEEEECCTTCC---CCEEEEEEEECCTTCSSCC
T ss_pred ccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCc-ceEEEEEEEEccCC---CEEEEEEeeecCCCCCCCC
Confidence 13 677887777766654344433 33333 333222 24565553 2
Q ss_pred CCCeEEEecccc-cCC----CCccceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 274 NRDLYLSMWSHS-LDK----PDTGSVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 274 ~~~~~~~~~~~~-~~~----~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
.|.+.++++... +.. .-.++|++++-- +|+.|++. ..+|++|++.+
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~i--g~~l~vy~l~~ 913 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLASI--NSTVRLYEWTT 913 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEEE--TTEEEEEEECT
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEEc--CCEEEEEECCC
Confidence 344566655321 000 014677777632 45544443 47899999864
No 337
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.65 E-value=4.3 Score=32.37 Aligned_cols=106 Identities=13% Similarity=0.041 Sum_probs=54.5
Q ss_pred CCCEEEEEcCC-CceEeeeEEeCCCCeeeEeecCCCc--eeEEEEecCCCEEEEEeC----------CeEEEEeCCCCee
Q psy11524 133 STDLILSGGED-CKYKASFVWDTDGRQLYSSLTHDHP--ISSLAWAPGGDMFAVGSY----------NTLRLCDKVGWSH 199 (323)
Q Consensus 133 ~~~~l~~~~~d-~~i~~i~v~d~~~~~~~~~~~~~~~--v~~~~~~p~~~~l~~~~~----------~~i~i~d~~~~~~ 199 (323)
++..++.|+.+ ..+..+++||.....-..+.....+ -.+++. -++.+++.|+. +.+.+||+.+..-
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 45666666642 2233444899876554444322111 112222 25666666653 2588899876544
Q ss_pred eecCCCC---ccEEEEEEcCCCCEEEEEecC-----c-EEEEEcCCCceee
Q psy11524 200 SLDKPDT---GSVYDLVWSNDATQIAGACAN-----V-IHIFDISSSSSSN 241 (323)
Q Consensus 200 ~~~~~~~---~~v~~~~~~~~~~~l~~~~~d-----~-i~iwd~~~~~~~~ 241 (323)
....... .....+.+ +++.++.|+.+ . +.+||..+.+...
T Consensus 103 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 151 (308)
T 1zgk_A 103 SPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHL 151 (308)
T ss_dssp EECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEE
T ss_pred eECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeE
Confidence 3322211 11222222 56666666532 3 8899988776443
No 338
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.36 E-value=6.4 Score=33.77 Aligned_cols=104 Identities=15% Similarity=0.205 Sum_probs=56.9
Q ss_pred CCEEEEEEcCCCC-eEEEEeeCCeEEEEeCCCCc-----eeEee---------ccCCCeEEEEECCC----CCEEEEEcC
Q psy11524 82 PPVYSAAWSPDSN-KVLLTQAKSLVIKPLSPNNK-----ATKWQ---------AHDGLILKVAWCSS----TDLILSGGE 142 (323)
Q Consensus 82 ~~v~~~~~sp~~~-~l~~~~~~~~~v~~~~~~~~-----~~~~~---------~~~~~v~~~~~~~~----~~~l~~~~~ 142 (323)
.....|+|.|+|. +|+++. ..|.|++++..+. +..+. ........|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~e-r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILE-KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEE-TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEe-CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4567899999996 455454 4478999875432 11111 11456789999996 443333222
Q ss_pred --CC-------ceEeeeEEeCCC-----------CeeeEee--cCCCceeEEEEecCCCEEEEEeC
Q psy11524 143 --DC-------KYKASFVWDTDG-----------RQLYSSL--THDHPISSLAWAPGGDMFAVGSY 186 (323)
Q Consensus 143 --d~-------~i~~i~v~d~~~-----------~~~~~~~--~~~~~v~~~~~~p~~~~l~~~~~ 186 (323)
++ ....|.-|.++. +.+..+. .....-..|+|.|||.++++.++
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 11 011111455421 1122222 11234578999999988776654
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.35 E-value=1.4 Score=36.03 Aligned_cols=106 Identities=8% Similarity=0.078 Sum_probs=58.8
Q ss_pred CEEEEEcCCCceEeeeEEeC-CCCeeeEeecC-CCceeEEEE--ec-CCCEEEEE-eC-CeEEEEeCCCCeeeecCC---
Q psy11524 135 DLILSGGEDCKYKASFVWDT-DGRQLYSSLTH-DHPISSLAW--AP-GGDMFAVG-SY-NTLRLCDKVGWSHSLDKP--- 204 (323)
Q Consensus 135 ~~l~~~~~d~~i~~i~v~d~-~~~~~~~~~~~-~~~v~~~~~--~p-~~~~l~~~-~~-~~i~i~d~~~~~~~~~~~--- 204 (323)
..++.++.||.|. -.|. +++.+..+... ..++....- .+ ++..++.. .. +.++.+|..+........
T Consensus 11 ~~V~v~t~dG~l~---Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 11 DILIAADVEGGLH---AVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEETTSCEE---EEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CEEEEEeCCCeEE---EEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 4677788888888 8886 46666666543 112221110 01 22333332 33 488888876432221110
Q ss_pred --CCccEEE---EEE-c----CCCCEEEEEecCc-EEEEEcCCCceeeee
Q psy11524 205 --DTGSVYD---LVW-S----NDATQIAGACANV-IHIFDISSSSSSNVT 243 (323)
Q Consensus 205 --~~~~v~~---~~~-~----~~~~~l~~~~~d~-i~iwd~~~~~~~~~~ 243 (323)
...++.. ... . ..+..+++++.++ +.-.|+++|+.+.++
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 1122221 001 0 0345788999999 999999999999884
No 340
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=89.65 E-value=7.3 Score=31.70 Aligned_cols=221 Identities=11% Similarity=0.080 Sum_probs=125.9
Q ss_pred EEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC--CCeeeEee
Q psy11524 88 AWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD--GRQLYSSL 163 (323)
Q Consensus 88 ~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~--~~~~~~~~ 163 (323)
-.+|..+.+|.-+ +..+.+++++.+ +.... ....|.-=.|-.+. .|+..+ +..|+ -|+++ ..+.+.+.
T Consensus 73 IMnP~~~ViALra--g~~LQiFnletK~klks~~-~~e~VvfWkWis~~-~L~lVT-~taVy---HWs~~~~s~P~kvFd 144 (365)
T 2xzh_A 73 IMNPASKVIALKA--GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLN-TVALVT-DNAVY---HWSMEGESQPVKMFD 144 (365)
T ss_dssp EECSSSSEEEEEE--TTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSS-EEEEEE-SSEEE---EEESSTTCCCEEEEE
T ss_pred eeCCCccEEEEec--CCeEEEechHHhhhhccee-cCCccEEEEecCCC-eEEEEc-CCcEE---EEcccCCCCCceeee
Confidence 3488888777654 347889988876 33332 34566666776543 444443 44566 99995 35555555
Q ss_pred cC----CCceeEEEEecCCCEEEEEe----C----CeEEEEeCCCCeeeecCCCCccEEEEEEcCC---CCEEEEEec--
Q psy11524 164 TH----DHPISSLAWAPGGDMFAVGS----Y----NTLRLCDKVGWSHSLDKPDTGSVYDLVWSND---ATQIAGACA-- 226 (323)
Q Consensus 164 ~~----~~~v~~~~~~p~~~~l~~~~----~----~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~-- 226 (323)
.| ...|..-..+++.++++..+ . |.+.+|..+.+..+.+.+|.+....+...-+ .+.++.+..
T Consensus 145 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~ 224 (365)
T 2xzh_A 145 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQ 224 (365)
T ss_dssp CCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEET
T ss_pred cchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecC
Confidence 44 34677778888999865443 1 3688999988888888888766544443321 123333333
Q ss_pred C-c-EEEEEcCCC---cee-----eeecCCC--CccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCC
Q psy11524 227 N-V-IHIFDISSS---SSS-----NVTAPLS--HSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPD 290 (323)
Q Consensus 227 d-~-i~iwd~~~~---~~~-----~~~~~~~--~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~ 290 (323)
. + +++.++... .+. ..+.+.. ...-.-++..++.- +.+.+...-|.+.+++++++ ..+..
T Consensus 225 ~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~ky----gviyviTK~G~ihlyDleTgt~i~~nrIS 300 (365)
T 2xzh_A 225 AGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH----DVVFLITKYGYIHLYDLETGTCIYMNRIS 300 (365)
T ss_dssp TEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTT----TEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccC----CEEEEEeCCcEEEEEEcccCcEEEEeccC
Confidence 2 4 999987432 110 0100111 12233345556554 77888888888888888874 11122
Q ss_pred ccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 291 TGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 291 ~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
.+.|-.-+-+....-++....+|.|.--.+
T Consensus 301 ~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v 330 (365)
T 2xzh_A 301 GETIFVTAPHEATAGIIGVNRKGQVLSVCV 330 (365)
T ss_dssp SSCEEEEEEEGGGTEEEEEETTCEEEEEEE
T ss_pred CCceEEecccCCCCcEEEEcCCCEEEEEEE
Confidence 334433333333334444456666554433
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=88.97 E-value=4.1 Score=37.07 Aligned_cols=147 Identities=7% Similarity=-0.023 Sum_probs=74.8
Q ss_pred CCCeEEEEeeCC-----eEEEEeCCCCceeE----eeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCCCCeeeEe
Q psy11524 92 DSNKVLLTQAKS-----LVIKPLSPNNKATK----WQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTDGRQLYSS 162 (323)
Q Consensus 92 ~~~~l~~~~~~~-----~~v~~~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~~~~~~~~ 162 (323)
+++.+++||.+. ..++.||.....-. +...... .+++...+++.++.|+.++.- .+++||+....-..+
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~-~v~~yd~~t~~W~~~ 528 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGP-AMLLYNVTEEIFKDV 528 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSC-SEEEEETTTTEEEEC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCC-CEEEEECCCCceEEc
Confidence 677777776432 24677777665211 1111111 223333478888888876532 334999875544443
Q ss_pred ec------CCCceeEEEEecC-CCEEEEEeC--------CeEEEEeCCCCe------eeecCC--CCcc-EEEEEEcCCC
Q psy11524 163 LT------HDHPISSLAWAPG-GDMFAVGSY--------NTLRLCDKVGWS------HSLDKP--DTGS-VYDLVWSNDA 218 (323)
Q Consensus 163 ~~------~~~~v~~~~~~p~-~~~l~~~~~--------~~i~i~d~~~~~------~~~~~~--~~~~-v~~~~~~~~~ 218 (323)
.. .......+.+..+ ++.++.|+. +.+..||+.+.. ...... .... -.+++...++
T Consensus 529 ~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~ 608 (695)
T 2zwa_A 529 TPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPR 608 (695)
T ss_dssp CCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETT
T ss_pred cCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCC
Confidence 32 1112233555655 667777754 258899976543 111111 0111 1122233336
Q ss_pred CEEEEEec--------Cc-EEEEEcCCCcee
Q psy11524 219 TQIAGACA--------NV-IHIFDISSSSSS 240 (323)
Q Consensus 219 ~~l~~~~~--------d~-i~iwd~~~~~~~ 240 (323)
+.++.|+. .. +.+||+.+.+..
T Consensus 609 ~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 609 KLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp EEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred EEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 66666653 23 777887766543
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.68 E-value=3.2 Score=36.36 Aligned_cols=115 Identities=12% Similarity=-0.017 Sum_probs=72.2
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--------------eeEeeccCCCeEEEEECCCCCEEEEEcCCCceE
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--------------ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYK 147 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 147 (323)
.....+..+|||+++++++.-...+.+++..+. +.....-.-.....+|.++|....+..-|..|.
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 455678999999999998765556666665421 111122344667899999996666667899999
Q ss_pred eeeEEeCC-------C----CeeeEeecCCCceeEEEE------ecCCCEEEEEeC---C-----------eEEEEeCCC
Q psy11524 148 ASFVWDTD-------G----RQLYSSLTHDHPISSLAW------APGGDMFAVGSY---N-----------TLRLCDKVG 196 (323)
Q Consensus 148 ~i~v~d~~-------~----~~~~~~~~~~~~v~~~~~------~p~~~~l~~~~~---~-----------~i~i~d~~~ 196 (323)
.|+++ + ..+..+.-|-. +-.+.- .|||++|++... | .-.+.|+.+
T Consensus 403 ---kWni~~a~~~~~g~~~~~v~~k~dv~Yq-pGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsG 478 (638)
T 3sbq_A 403 ---KWNMEEAVRAYKGEKVNYIKQKLDVHYQ-PGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISG 478 (638)
T ss_dssp ---EEEHHHHHHHHTTCCCCCEEEEEECSSC-EEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSS
T ss_pred ---EEeccHHHHHhcCccCCeeeeccccccC-CcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCC
Confidence 99983 2 22333433322 222222 468899888764 2 246777776
Q ss_pred Ceee
Q psy11524 197 WSHS 200 (323)
Q Consensus 197 ~~~~ 200 (323)
.+..
T Consensus 479 dkM~ 482 (638)
T 3sbq_A 479 DEMK 482 (638)
T ss_dssp SSCE
T ss_pred CceE
Confidence 5433
No 343
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=88.13 E-value=11 Score=31.98 Aligned_cols=223 Identities=12% Similarity=0.094 Sum_probs=128.6
Q ss_pred EEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC--CCeeeE
Q psy11524 86 SAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD--GRQLYS 161 (323)
Q Consensus 86 ~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~--~~~~~~ 161 (323)
+.-.+|..+.+|.=. +..+.+++++.+ +.... ....|.-=.|-.+ +.|+..+ +..|+ -|+++ ..+.+.
T Consensus 70 sAIMnP~~~iiALra--g~~lQiFnle~K~klks~~-~~e~VvfWkWis~-~~l~lVT-~taVy---HWsi~~~s~P~kv 141 (494)
T 1bpo_A 70 SAIMNPASKVIALKA--GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISL-NTVALVT-DNAVY---HWSMEGESQPVKM 141 (494)
T ss_dssp EEEECSSSSCEEEEE--TTEEEEEETTTTEEEEEEE-CSSCCCEEEEEET-TEEEEEC-SSEEE---EEESSSSCCCEEE
T ss_pred eeeeCCCCcEEEEec--CCeEEEEchHHhhhhccee-cCCCceEEEecCC-CeEEEEc-CCeeE---EecccCCCCchhh
Confidence 344678777777654 348888888776 33333 2344544456543 3444444 44577 99995 455556
Q ss_pred eecC----CCceeEEEEecCCCEEEEEe----C----CeEEEEeCCCCeeeecCCCCccEEEEEEcCCC---CEEEEEec
Q psy11524 162 SLTH----DHPISSLAWAPGGDMFAVGS----Y----NTLRLCDKVGWSHSLDKPDTGSVYDLVWSNDA---TQIAGACA 226 (323)
Q Consensus 162 ~~~~----~~~v~~~~~~p~~~~l~~~~----~----~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~~~ 226 (323)
+..| ...|..-..+++.++++..+ . |.+.+|..+....+.+.+|.+....+...-+. ..++.+..
T Consensus 142 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r 221 (494)
T 1bpo_A 142 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVR 221 (494)
T ss_dssp EECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEEC
T ss_pred eecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEe
Confidence 6554 34677778889999866433 1 36889999888788888887766555443221 23444433
Q ss_pred ---Cc-EEEEEcCCC---ce-----eeeecCC--CCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCC
Q psy11524 227 ---NV-IHIFDISSS---SS-----SNVTAPL--SHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDK 288 (323)
Q Consensus 227 ---d~-i~iwd~~~~---~~-----~~~~~~~--~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~ 288 (323)
.+ ++|.++... .+ ...+.+. ....-.-++..++.- +.+.+...-|.+.++++.++ ..+
T Consensus 222 ~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~ky----gviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 222 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH----DVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp STTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTT----TEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred cCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccC----CEEEEEecCceEEEEecccceeeeeec
Confidence 25 999988543 11 1110011 112233456666665 78888888888888888874 111
Q ss_pred CCccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 289 PDTGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 289 ~~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
...+.|-.-+-+....-++....+|.|.--.+
T Consensus 298 Is~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 298 ISGETIFVTAPHEATAGIIGVNRKGQVLSVCV 329 (494)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTCEEEEEEE
T ss_pred ccCCceEEecccCCCCcEEEEccCceEEEEEE
Confidence 22334433333333344555556666554443
No 344
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=83.85 E-value=20 Score=30.73 Aligned_cols=101 Identities=9% Similarity=-0.015 Sum_probs=57.6
Q ss_pred CCeEEEEECCCCC-EEEEEcCCCceEeeeEEeCCCCe----eeEee---------cCCCceeEEEEecC----CCEEEEE
Q psy11524 123 GLILKVAWCSSTD-LILSGGEDCKYKASFVWDTDGRQ----LYSSL---------THDHPISSLAWAPG----GDMFAVG 184 (323)
Q Consensus 123 ~~v~~~~~~~~~~-~l~~~~~d~~i~~i~v~d~~~~~----~~~~~---------~~~~~v~~~~~~p~----~~~l~~~ 184 (323)
.....|+|.|||. .|+++...|.|+ +++.++.. +..+. ........|+|+|+ +.+.++-
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~---~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~y 90 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVK---ILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSY 90 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEE---EECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEE---EEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEE
Confidence 4567899999996 455667789999 98765331 22221 11356789999996 4443332
Q ss_pred eC-------------CeEEEEeCCC----------Ceee-e-c-CCCCccEEEEEEcCCCCEEEEEec
Q psy11524 185 SY-------------NTLRLCDKVG----------WSHS-L-D-KPDTGSVYDLVWSNDATQIAGACA 226 (323)
Q Consensus 185 ~~-------------~~i~i~d~~~----------~~~~-~-~-~~~~~~v~~~~~~~~~~~l~~~~~ 226 (323)
+. +.|.-|.+.. ..+. . . ......-..++|.|||.+.++.+.
T Consensus 91 t~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 91 TTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp EECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred eCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 21 1333344421 1111 1 1 111224678999999986666543
No 345
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=83.21 E-value=18 Score=29.88 Aligned_cols=184 Identities=9% Similarity=-0.014 Sum_probs=89.6
Q ss_pred CCCEEEEEEcC-CCCeEEEEeeCC---eEEEEeCCCCc-eeEee------c--------cCCCeEEEEECC-C-CCEEEE
Q psy11524 81 SPPVYSAAWSP-DSNKVLLTQAKS---LVIKPLSPNNK-ATKWQ------A--------HDGLILKVAWCS-S-TDLILS 139 (323)
Q Consensus 81 ~~~v~~~~~sp-~~~~l~~~~~~~---~~v~~~~~~~~-~~~~~------~--------~~~~v~~~~~~~-~-~~~l~~ 139 (323)
...|.+|++.| +...|.+++... ..|+..+..+. -..+. . ....|.++++.| + ...+.+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 46799999998 333444454442 03444433332 11111 1 112577889987 2 455655
Q ss_pred EcCCCceEeeeEEeCCCCeeeEeec-------------------CCCceeEEEEecC-CCEEEEEe-CCeEEEEeCCCCe
Q psy11524 140 GGEDCKYKASFVWDTDGRQLYSSLT-------------------HDHPISSLAWAPG-GDMFAVGS-YNTLRLCDKVGWS 198 (323)
Q Consensus 140 ~~~d~~i~~i~v~d~~~~~~~~~~~-------------------~~~~v~~~~~~p~-~~~l~~~~-~~~i~i~d~~~~~ 198 (323)
+...+.|. ..+-.++.-..+.. ....+.+|.++|. ...+..+. .+.|...+-.+..
T Consensus 134 g~~~ggl~---~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~DgG~t 210 (394)
T 3b7f_A 134 GTSPQGLF---RSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDAGTD 210 (394)
T ss_dssp EEETTEEE---EESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESSTTSS
T ss_pred EecCCcEE---EEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCCCCC
Confidence 55555554 44333333222211 1235788999883 34444444 3455554433332
Q ss_pred eeecCC--C-----------CccEEEEEEcCC-CCEEEEEecCcEEEEEcCCCceeeeecC-CCC--ccceEEEEEccCC
Q psy11524 199 HSLDKP--D-----------TGSVYDLVWSND-ATQIAGACANVIHIFDISSSSSSNVTAP-LSH--SHEITQLAVNQTG 261 (323)
Q Consensus 199 ~~~~~~--~-----------~~~v~~~~~~~~-~~~l~~~~~d~i~iwd~~~~~~~~~~~~-~~~--~~~v~~~~~~p~g 261 (323)
-..... . ...+.++.++|. ...|..+...+|...+ ..++.-..+.. ... ...+..++++|..
T Consensus 211 W~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~ 289 (394)
T 3b7f_A 211 WKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRD 289 (394)
T ss_dssp CEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSC
T ss_pred ceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeC-CCCCcceECCCCCCCCCccceEEEEECCCC
Confidence 221110 0 134889999985 4566666655565554 22332222100 111 0235678887743
Q ss_pred CCccceEEEE
Q psy11524 262 SLQERHVAFI 271 (323)
Q Consensus 262 ~~~d~~l~~~ 271 (323)
. +.|.+.
T Consensus 290 ~---~~l~~~ 296 (394)
T 3b7f_A 290 P---RTVWVF 296 (394)
T ss_dssp T---TCEEEE
T ss_pred C---CEEEEE
Confidence 2 455554
No 346
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=81.51 E-value=18 Score=28.69 Aligned_cols=100 Identities=9% Similarity=0.008 Sum_probs=51.3
Q ss_pred EEEEEcCCCceEeeeEEeCCCCeeeEeec--CCCceeEEEEecCCCEEEEEeC--------C----eEEEEeCCCCeeee
Q psy11524 136 LILSGGEDCKYKASFVWDTDGRQLYSSLT--HDHPISSLAWAPGGDMFAVGSY--------N----TLRLCDKVGWSHSL 201 (323)
Q Consensus 136 ~l~~~~~d~~i~~i~v~d~~~~~~~~~~~--~~~~v~~~~~~p~~~~l~~~~~--------~----~i~i~d~~~~~~~~ 201 (323)
+++.|+ ..+. +||.....-..... ........+...++..++.|+. . .+..||..+..-..
T Consensus 7 l~~~GG--~~~~---~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 7 IFMISE--EGAV---AYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp EEEEET--TEEE---EEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred EEEEcC--CceE---EECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 344555 4566 99986554322111 1122223333457778777772 1 27788987654433
Q ss_pred cCCCCccE--EEEEEcCCCCEEEEEecC--------c-EEEEEcCCCceee
Q psy11524 202 DKPDTGSV--YDLVWSNDATQIAGACAN--------V-IHIFDISSSSSSN 241 (323)
Q Consensus 202 ~~~~~~~v--~~~~~~~~~~~l~~~~~d--------~-i~iwd~~~~~~~~ 241 (323)
......+- .+++.. +++.++.|+.+ . +.+||..+.+...
T Consensus 82 ~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~ 131 (315)
T 4asc_A 82 MPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGE 131 (315)
T ss_dssp CCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEE
T ss_pred CCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeE
Confidence 32221111 122222 56666666631 3 8899988775443
No 347
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=81.11 E-value=19 Score=28.63 Aligned_cols=135 Identities=10% Similarity=0.044 Sum_probs=66.0
Q ss_pred EEEEeCCCCceeE---eeccCCCeEEEEECCCCCEEEEEcC----CCc---e-EeeeEEeCCCCeeeEeecCCCc--eeE
Q psy11524 105 VIKPLSPNNKATK---WQAHDGLILKVAWCSSTDLILSGGE----DCK---Y-KASFVWDTDGRQLYSSLTHDHP--ISS 171 (323)
Q Consensus 105 ~v~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~----d~~---i-~~i~v~d~~~~~~~~~~~~~~~--v~~ 171 (323)
.+..||.....-. +..............++..++.|+. ++. + ..+++||.....-..+.....+ -.+
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~ 104 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFG 104 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCE
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccc
Confidence 3667777655211 1111122223333456778888873 121 1 1144888865554444322211 112
Q ss_pred EEEecCCCEEEEEeC--------CeEEEEeCCCCeeeecCCCCccE--EEEEEcCCCCEEEEEec------Cc-EEEEEc
Q psy11524 172 LAWAPGGDMFAVGSY--------NTLRLCDKVGWSHSLDKPDTGSV--YDLVWSNDATQIAGACA------NV-IHIFDI 234 (323)
Q Consensus 172 ~~~~p~~~~l~~~~~--------~~i~i~d~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~~~~~------d~-i~iwd~ 234 (323)
++.. +++.++.|+. +.+.+||+.+..-.......... .+++. .+++.++.|+. -. +.+||.
T Consensus 105 ~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 182 (318)
T 2woz_A 105 LGEV-DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNP 182 (318)
T ss_dssp EEEE-TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEET
T ss_pred eEEE-CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcC
Confidence 2222 5667666653 14788898765443332222111 12222 46666666653 23 889998
Q ss_pred CCCceee
Q psy11524 235 SSSSSSN 241 (323)
Q Consensus 235 ~~~~~~~ 241 (323)
.+.+...
T Consensus 183 ~~~~W~~ 189 (318)
T 2woz_A 183 KKGDWKD 189 (318)
T ss_dssp TTTEEEE
T ss_pred CCCEEEE
Confidence 8876444
No 348
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=80.48 E-value=35 Score=31.22 Aligned_cols=216 Identities=12% Similarity=0.088 Sum_probs=118.2
Q ss_pred CCEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc-eeEee-----ccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC
Q psy11524 82 PPVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK-ATKWQ-----AHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD 155 (323)
Q Consensus 82 ~~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~-~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~ 155 (323)
..|.++.. .+| .|.++..+ -+..++..+. ...+. .....|.++....+|.+.+. +.. -+. .++..
T Consensus 103 ~~i~~i~~-~~g-~lWigt~~--Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-t~~-Gl~---~~~~~ 173 (758)
T 3ott_A 103 TDVRTMAL-QGD-TLWLGALN--GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYVG-TYN-GLC---RYIPS 173 (758)
T ss_dssp SCEEEEEE-ETT-EEEEEETT--EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEEE-ETT-EEE---EEETT
T ss_pred ceEEEEEe-cCC-cEEEEcCC--cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEEE-eCC-CHh---hCccC
Confidence 35777654 345 45445444 3566665543 33331 11346888888877776553 333 466 78876
Q ss_pred CCeeeEeecC------CCceeEEEEecCCCEEEEEeCCeEEEEeCCCCeeeecCC-CCccEEEEEEcCCCCEEEEEecCc
Q psy11524 156 GRQLYSSLTH------DHPISSLAWAPGGDMFAVGSYNTLRLCDKVGWSHSLDKP-DTGSVYDLVWSNDATQIAGACANV 228 (323)
Q Consensus 156 ~~~~~~~~~~------~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~ 228 (323)
......+... ...|.++...+++..|..++.+.+..+|..+........ ....|.++...++|.+.+ |+.+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~G 252 (758)
T 3ott_A 174 NGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDNG 252 (758)
T ss_dssp TTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETTE
T ss_pred CCceEEecCCCccccccceeEEEEEECCCCEEEEEECCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCCc
Confidence 5554433211 124788888777765555554468888977554332211 234588888888886544 45445
Q ss_pred EEEEEcCCCceeeeecCC-----CCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc---------cCCCCccce
Q psy11524 229 IHIFDISSSSSSNVTAPL-----SHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS---------LDKPDTGSV 294 (323)
Q Consensus 229 i~iwd~~~~~~~~~~~~~-----~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~---------~~~~~~~~v 294 (323)
+.+++..+++........ -....|.++....+| .|-++...| +.+...... ........|
T Consensus 253 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g-----~lWiGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v 326 (758)
T 3ott_A 253 LYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEH-----NIWLGTDYG-ISLSRYNSALQFIPISQITGTGDGNQF 326 (758)
T ss_dssp EEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTC-----CEEEEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBE
T ss_pred eeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCC-----CEEEEeCCc-ccccccCCceeEEecccCCCCCCCceE
Confidence 888997765433210000 112357888777664 566666544 333221110 011123468
Q ss_pred eEEEEeeCCCeeEeeecCCe
Q psy11524 295 YDLVWSSDATQIAGACANGS 314 (323)
Q Consensus 295 ~~~~~s~~g~~l~s~~~dg~ 314 (323)
.++.-.++|.+.+. +.+|.
T Consensus 327 ~~i~~D~~g~lWiG-t~~Gl 345 (758)
T 3ott_A 327 YSLFRDSKGFYWFG-GANGL 345 (758)
T ss_dssp EEEEECTTCCEEEE-ETTEE
T ss_pred EEEEEcCCCCEEEe-eCCcc
Confidence 88887777764443 34553
No 349
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=76.16 E-value=29 Score=28.03 Aligned_cols=91 Identities=11% Similarity=0.142 Sum_probs=44.2
Q ss_pred CCCEEEEEcCCCceEeeeEEeCCC--CeeeEeecCC--Cc-eeEEEEecCCCEEEEEeC-----------CeEEEEeCCC
Q psy11524 133 STDLILSGGEDCKYKASFVWDTDG--RQLYSSLTHD--HP-ISSLAWAPGGDMFAVGSY-----------NTLRLCDKVG 196 (323)
Q Consensus 133 ~~~~l~~~~~d~~i~~i~v~d~~~--~~~~~~~~~~--~~-v~~~~~~p~~~~l~~~~~-----------~~i~i~d~~~ 196 (323)
+++.++.|+.++. .++++|+.. ..-..+.... .. -.+++. -++++++.|+. +.+.+||+.+
T Consensus 19 ~~~iyv~GG~~~~--~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGT--AWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTT--CEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCC--eEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 5666667765432 233888852 3333332222 11 112222 25666666654 2588899876
Q ss_pred CeeeecCCCC--ccEEEEEEcCCCCEEEEEec
Q psy11524 197 WSHSLDKPDT--GSVYDLVWSNDATQIAGACA 226 (323)
Q Consensus 197 ~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~ 226 (323)
..-....... ......+...+++.++.|+.
T Consensus 96 ~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 127 (357)
T 2uvk_A 96 NSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGV 127 (357)
T ss_dssp TEEEECSCCCSSCCSSEEEEEETTEEEEEECC
T ss_pred CcEEECCCCCCcccccceEEEECCEEEEEeCc
Confidence 5443332211 11112122256777777764
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=72.16 E-value=34 Score=26.89 Aligned_cols=208 Identities=11% Similarity=-0.020 Sum_probs=101.7
Q ss_pred CEEEEEEcCCCCeEEEEeeCCeEEEEeCCCCc--eeEeeccCCCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC--CCe
Q psy11524 83 PVYSAAWSPDSNKVLLTQAKSLVIKPLSPNNK--ATKWQAHDGLILKVAWCSSTDLILSGGEDCKYKASFVWDTD--GRQ 158 (323)
Q Consensus 83 ~v~~~~~sp~~~~l~~~~~~~~~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~--~~~ 158 (323)
.|..++.... +.+.. . ++.++.|-.+.. +..-......|..++...+. .++. . ||.+. .|-.. ++.
T Consensus 25 ~i~~ia~G~~--h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~---~wG~n~~Gql 94 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH-SLAL-K-DGEVI---AWGGNEDGQT 94 (282)
T ss_dssp SCCEEEECSS--EEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE-EEEE-E-TTEEE---EEECCTTSTT
T ss_pred CCcEEEeCCC--eEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE-EEEE-E-CCEEE---EeeCCCCCCC
Confidence 4556655432 22222 2 357777754432 11111123356677665432 2333 4 89888 88763 221
Q ss_pred eeEeecCCCceeEEEEecCCCEEEEEeCCeEEEEeCCCC-eeeecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCC
Q psy11524 159 LYSSLTHDHPISSLAWAPGGDMFAVGSYNTLRLCDKVGW-SHSLDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISS 236 (323)
Q Consensus 159 ~~~~~~~~~~v~~~~~~p~~~~l~~~~~~~i~i~d~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~ 236 (323)
- .-......|..++...+. .++.. ++.++.|-.... .+.........|..++.-.+. .+.-. ++ ++.|-...
T Consensus 95 g-~P~~~~~~v~~ia~G~~h-s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~ 168 (282)
T 3qhy_B 95 T-VPAEARSGVDAIAAGAWA-SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNY 168 (282)
T ss_dssp C-CCGGGSSSEEEEEEETTE-EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCT
T ss_pred C-CCcccCCCeEEEECcCCE-EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCC
Confidence 1 111113467777766443 33444 669999975432 111111123457666654433 23333 68 99997654
Q ss_pred CceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccc----cCCCCccceeEEEEeeCCCeeEeeecC
Q psy11524 237 SSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHS----LDKPDTGSVYDLVWSSDATQIAGACAN 312 (323)
Q Consensus 237 ~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~----~~~~~~~~v~~~~~s~~g~~l~s~~~d 312 (323)
...+.. .......|..++.... ..+++ .++.++.|-.... +.......|..++-... +.+.-. |
T Consensus 169 ~gqlg~--p~~~~~~v~~i~~G~~-----hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~--h~~al~-~ 236 (282)
T 3qhy_B 169 FGQTTV--PAEAQSGVDDVAGGIF-----HSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEW--YSLALK-N 236 (282)
T ss_dssp TSTTSC--CGGGGSSEEEEEECSS-----EEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSS--CEEEEE-T
T ss_pred CCCCCC--ceecCCCeEEEEecCC-----EEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCC--EEEEEE-C
Confidence 322221 1112345666665543 45555 3777777754432 10001245666665433 333333 8
Q ss_pred CeEEEE
Q psy11524 313 GSLLLG 318 (323)
Q Consensus 313 g~i~~~ 318 (323)
|.++.|
T Consensus 237 g~v~~w 242 (282)
T 3qhy_B 237 GKVIAW 242 (282)
T ss_dssp TEEEEE
T ss_pred CEEEEe
Confidence 888887
No 351
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=70.22 E-value=25 Score=30.97 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=39.1
Q ss_pred ceeEEEEecCCCEEEEEeC------------C-eEEEEeCCCCeee-ecC-CCCccEEEEEEcCCCCEEEEEe
Q psy11524 168 PISSLAWAPGGDMFAVGSY------------N-TLRLCDKVGWSHS-LDK-PDTGSVYDLVWSNDATQIAGAC 225 (323)
Q Consensus 168 ~v~~~~~~p~~~~l~~~~~------------~-~i~i~d~~~~~~~-~~~-~~~~~v~~~~~~~~~~~l~~~~ 225 (323)
....|.|+++|.+.+.... + .+..++..+..+. ... .....++.++|+||++.|++.-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 4568999999987663321 1 5777776544333 332 2345789999999999887664
No 352
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=68.33 E-value=45 Score=26.86 Aligned_cols=180 Identities=8% Similarity=-0.028 Sum_probs=94.0
Q ss_pred CCCCEEEEEcCCCceEeeeEEeCC-----CCeeeEeecCCCceeEEEEecCCCE-EEEEeCCeEEE---EeCCCC-----
Q psy11524 132 SSTDLILSGGEDCKYKASFVWDTD-----GRQLYSSLTHDHPISSLAWAPGGDM-FAVGSYNTLRL---CDKVGW----- 197 (323)
Q Consensus 132 ~~~~~l~~~~~d~~i~~i~v~d~~-----~~~~~~~~~~~~~v~~~~~~p~~~~-l~~~~~~~i~i---~d~~~~----- 197 (323)
|+...+++.+.+|.|+ --.+. +.....+...+ .+..+........ ++..+.|.++- +++...
T Consensus 3 ~~e~~~v~lT~~G~IK---r~~~~~~~~~~~~~~~lke~D-~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~ 78 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVK---RTSLRSYAASNGQDFAMKDTD-RLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDL 78 (323)
T ss_dssp SCCEEEEEEETTCEEE---EEEHHHHHHTTTCCCCCCTTC-CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSC
T ss_pred cCCcEEEEEeCCCEEE---EeEHHHhhhcCccccccCCCC-EEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCC
Confidence 5667888999999998 54431 22112233333 3333333333444 44444465443 444311
Q ss_pred ee--ee-c-CCCCccEEEE-EEcC--CCCEEEEEecCc-EEEEEcCC------CceeeeecCCCCccceEEEEEccCCCC
Q psy11524 198 SH--SL-D-KPDTGSVYDL-VWSN--DATQIAGACANV-IHIFDISS------SSSSNVTAPLSHSHEITQLAVNQTGSL 263 (323)
Q Consensus 198 ~~--~~-~-~~~~~~v~~~-~~~~--~~~~l~~~~~d~-i~iwd~~~------~~~~~~~~~~~~~~~v~~~~~~p~g~~ 263 (323)
-. .. + ......|..+ ...+ ++.+++..+.+| ++--.+.. ++-+..+++... ..+-.+......
T Consensus 79 G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~-d~lv~~~~~~~~-- 155 (323)
T 1wp5_A 79 GQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND-DQVVDVHLTDGM-- 155 (323)
T ss_dssp CEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT-CCEEEEEEECSC--
T ss_pred CcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC-CEEEEEEEeCCC--
Confidence 11 11 1 1123345554 3332 256899999999 98887532 111222113333 444444443333
Q ss_pred ccceEEEEeCCCCeEEEecccc-----------cCCC-CccceeEEEEeeCCC-eeEeeecCCeEEEEEe
Q psy11524 264 QERHVAFIDKNRDLYLSMWSHS-----------LDKP-DTGSVYDLVWSSDAT-QIAGACANGSLLLGTI 320 (323)
Q Consensus 264 ~d~~l~~~~~~~~~~~~~~~~~-----------~~~~-~~~~v~~~~~s~~g~-~l~s~~~dg~i~~~~l 320 (323)
..|.+.+..|....+..... .... .+..|.++..-+++. .|+..+..|..+..++
T Consensus 156 --~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~ 223 (323)
T 1wp5_A 156 --NELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKL 223 (323)
T ss_dssp --SEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred --CEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEH
Confidence 57888888888777666542 1111 134566665544455 7888888888776554
No 353
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=67.69 E-value=37 Score=29.98 Aligned_cols=62 Identities=10% Similarity=0.110 Sum_probs=39.8
Q ss_pred CeEEEEECCCCCEEEEEcCC----------CceEeeeEEeCCCCeeeEeec--CCCceeEEEEecCCCEEEEEeC
Q psy11524 124 LILKVAWCSSTDLILSGGED----------CKYKASFVWDTDGRQLYSSLT--HDHPISSLAWAPGGDMFAVGSY 186 (323)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~d----------~~i~~i~v~d~~~~~~~~~~~--~~~~v~~~~~~p~~~~l~~~~~ 186 (323)
....|.|.++|.+.+..... +.- .++.++.....+..+.. ....++.++|+||++.|+++-.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn-~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNN-QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSC-EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCc-eEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 46789999999877743321 100 23366765444544432 2357899999999998877654
No 354
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=66.92 E-value=27 Score=28.40 Aligned_cols=25 Identities=12% Similarity=0.003 Sum_probs=20.7
Q ss_pred CEEEEEecCc-EEEEEcCCCceeeee
Q psy11524 219 TQIAGACANV-IHIFDISSSSSSNVT 243 (323)
Q Consensus 219 ~~l~~~~~d~-i~iwd~~~~~~~~~~ 243 (323)
..++.++.|| |+-.|..+|+.+-++
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~ 36 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSI 36 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 3688888999 999999899887763
No 355
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=64.71 E-value=31 Score=30.65 Aligned_cols=60 Identities=10% Similarity=0.139 Sum_probs=34.1
Q ss_pred CeEEEEECCCCCEEEEEcCCC----------ceEeeeEEeCCCCeeeEee-c-CCCceeEEEEecCCCEEEEE
Q psy11524 124 LILKVAWCSSTDLILSGGEDC----------KYKASFVWDTDGRQLYSSL-T-HDHPISSLAWAPGGDMFAVG 184 (323)
Q Consensus 124 ~v~~~~~~~~~~~l~~~~~d~----------~i~~i~v~d~~~~~~~~~~-~-~~~~v~~~~~~p~~~~l~~~ 184 (323)
..-.|+|+|+|.+++.-..+. .- .+++.+.....+..+. . ....++.++|+||++.|++.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn-~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNN-QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSC-EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccc-eEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 346789999998766544321 11 1224455433443332 2 34567778888877776554
No 356
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=62.15 E-value=13 Score=35.27 Aligned_cols=36 Identities=6% Similarity=0.260 Sum_probs=31.3
Q ss_pred cEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeee
Q psy11524 208 SVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVT 243 (323)
Q Consensus 208 ~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~ 243 (323)
.+.+++..++..++++-+.|+ +|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 467788888888999999999 999999999887753
No 357
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=61.29 E-value=59 Score=25.68 Aligned_cols=149 Identities=8% Similarity=0.091 Sum_probs=75.3
Q ss_pred EcCCCCeEEEEeeC----C------eEEEEeCCCCce-eEe---eccCCCeEEEEECCCCCEEEEEcCC----CceEeee
Q psy11524 89 WSPDSNKVLLTQAK----S------LVIKPLSPNNKA-TKW---QAHDGLILKVAWCSSTDLILSGGED----CKYKASF 150 (323)
Q Consensus 89 ~sp~~~~l~~~~~~----~------~~v~~~~~~~~~-~~~---~~~~~~v~~~~~~~~~~~l~~~~~d----~~i~~i~ 150 (323)
...+++.+++|+.. . ..++.+|..... ..+ .........+.+ +++.++.|+.+ .....++
T Consensus 53 ~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 53 VTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp ECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEE
T ss_pred EEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEE
Confidence 34567777777621 1 126777776552 111 111111222222 56777777653 2334566
Q ss_pred EEeCCCCeeeEeecCCCce--eEEEEecCCCEEEEEeC-------CeEEEEeCCCCeeeecCCCC--ccEEEEEEcCCCC
Q psy11524 151 VWDTDGRQLYSSLTHDHPI--SSLAWAPGGDMFAVGSY-------NTLRLCDKVGWSHSLDKPDT--GSVYDLVWSNDAT 219 (323)
Q Consensus 151 v~d~~~~~~~~~~~~~~~v--~~~~~~p~~~~l~~~~~-------~~i~i~d~~~~~~~~~~~~~--~~v~~~~~~~~~~ 219 (323)
+||+....-..+.....+. .+++. .++++++.|+. +.+.+||+.+..-....... ..-.+++. -+++
T Consensus 131 ~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~ 208 (318)
T 2woz_A 131 CYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HKGK 208 (318)
T ss_dssp EEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTE
T ss_pred EEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-ECCE
Confidence 9998765544443222211 12222 46777777653 25889998765433222111 11112222 2566
Q ss_pred EEEEEecC-----c-EEEEEcCCCceee
Q psy11524 220 QIAGACAN-----V-IHIFDISSSSSSN 241 (323)
Q Consensus 220 ~l~~~~~d-----~-i~iwd~~~~~~~~ 241 (323)
.++.|+.+ . +.+||+.+.+...
T Consensus 209 iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 236 (318)
T 2woz_A 209 IVIAGGVTEDGLSASVEAFDLKTNKWEV 236 (318)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTCCEEE
T ss_pred EEEEcCcCCCCccceEEEEECCCCeEEE
Confidence 77776542 3 7789988776444
No 358
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=57.21 E-value=57 Score=28.92 Aligned_cols=58 Identities=9% Similarity=-0.009 Sum_probs=39.3
Q ss_pred cEEEEEEcCCCCEEEEEecC------------c-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEE
Q psy11524 208 SVYDLVWSNDATQIAGACAN------------V-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAF 270 (323)
Q Consensus 208 ~v~~~~~~~~~~~l~~~~~d------------~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~ 270 (323)
..-.|+|+|.|.+++.-..+ . +.+.+..+++....+ .......++.++|+||+ ++|.+
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~-~~P~gaE~TG~~fspDg----~tlfv 547 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFM-VGPIGCEVTGISFSPDQ----KTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEE-ECCTTCEEEEEEECTTS----SEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEE-eCCCCccCcCeeECCCC----CEEEE
Confidence 45789999999865554321 2 566677777765542 22356789999999998 66654
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=49.90 E-value=13 Score=36.12 Aligned_cols=36 Identities=6% Similarity=0.260 Sum_probs=30.0
Q ss_pred cEEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeee
Q psy11524 208 SVYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVT 243 (323)
Q Consensus 208 ~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~ 243 (323)
.+.+++..++..++++-+.|+ +|+|++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 345566778888999999999 999999999887764
No 360
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=46.92 E-value=31 Score=31.40 Aligned_cols=35 Identities=11% Similarity=0.103 Sum_probs=27.3
Q ss_pred EEEEEEcCCCCEEEEEecCc-EEEEEcCCCceeeeecC
Q psy11524 209 VYDLVWSNDATQIAGACANV-IHIFDISSSSSSNVTAP 245 (323)
Q Consensus 209 v~~~~~~~~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~ 245 (323)
|.++.+ +..++++-+.|. +|+|++++++++.+..+
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 444444 467999999999 99999999997776434
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=45.69 E-value=2e+02 Score=27.24 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=25.0
Q ss_pred ceeEEEEecCCCEEEEEeCC-eEEEEeCCCC
Q psy11524 168 PISSLAWAPGGDMFAVGSYN-TLRLCDKVGW 197 (323)
Q Consensus 168 ~v~~~~~~p~~~~l~~~~~~-~i~i~d~~~~ 197 (323)
.+.+++..++..++++-+.| ++|+|++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTT
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCC
Confidence 46777788888899999998 9999998754
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=43.55 E-value=40 Score=32.74 Aligned_cols=30 Identities=7% Similarity=0.074 Sum_probs=22.8
Q ss_pred ceeEEEEeeCCCeeEeeecCCeEEEEEeec
Q psy11524 293 SVYDLVWSSDATQIAGACANGSLLLGTIIQ 322 (323)
Q Consensus 293 ~v~~~~~s~~g~~l~s~~~dg~i~~~~l~~ 322 (323)
.+.+++..++..+|++-+.|+++|+|++.+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t 268 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLST 268 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTT
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCC
Confidence 445566677778888889999999998743
No 363
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=43.54 E-value=1.2e+02 Score=23.77 Aligned_cols=111 Identities=8% Similarity=-0.020 Sum_probs=65.8
Q ss_pred CCccEEEEEEcC-CCCEEEEEecCc-EEEEEcCCCc----eeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeE
Q psy11524 205 DTGSVYDLVWSN-DATQIAGACANV-IHIFDISSSS----SSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLY 278 (323)
Q Consensus 205 ~~~~v~~~~~~~-~~~~l~~~~~d~-i~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~ 278 (323)
....|..+.... +..+++..+.+| ++-..+..-. -...+.+... ..+..+...... ..|.+.+..|...
T Consensus 66 ~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkeg-D~l~~~~~~~~~----~~ill~T~~G~~~ 140 (276)
T 3no0_A 66 REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEG-DEVVSIASSVDE----THILLFTKKGRVA 140 (276)
T ss_dssp TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTT-CCEEEEEECCSS----CEEEEEETTSEEE
T ss_pred CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCC-CEEEEEEEeCCC----CEEEEEECCCEEE
Confidence 345566664422 467899999999 9888764422 1111112332 344444444333 6788888888877
Q ss_pred EEecccc-----------cCCC-CccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 279 LSMWSHS-----------LDKP-DTGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 279 ~~~~~~~-----------~~~~-~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
.+..... .... .++.|.++...+++..|+..+..|.++...+
T Consensus 141 r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~ 194 (276)
T 3no0_A 141 RFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISH 194 (276)
T ss_dssp EEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEG
T ss_pred EEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEH
Confidence 7665442 0011 1355666655566678888889998876654
No 364
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=40.78 E-value=2.2e+02 Score=26.24 Aligned_cols=143 Identities=8% Similarity=-0.002 Sum_probs=69.0
Q ss_pred CCCEEEEEEcCCCC-eEEEEeeCCeEEEEeCCCCc-eeEeec-------cCCCeEEEEECCC-CCEEEEEcCCCc----e
Q psy11524 81 SPPVYSAAWSPDSN-KVLLTQAKSLVIKPLSPNNK-ATKWQA-------HDGLILKVAWCSS-TDLILSGGEDCK----Y 146 (323)
Q Consensus 81 ~~~v~~~~~sp~~~-~l~~~~~~~~~v~~~~~~~~-~~~~~~-------~~~~v~~~~~~~~-~~~l~~~~~d~~----i 146 (323)
...|.+|+++|... .+++++.. +.|+..+..+. -..+.. ....+.++++.|. ...++.+..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~-ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDI-GGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESS-SCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecC-CCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 56899999999754 44444444 34544443333 222222 1246899999984 344444432211 2
Q ss_pred EeeeEEe-CC-CCeeeEeecC-------C--CceeEEEEecC-CCEEEEEeC-CeEEEEeCCC--CeeeecC----CCCc
Q psy11524 147 KASFVWD-TD-GRQLYSSLTH-------D--HPISSLAWAPG-GDMFAVGSY-NTLRLCDKVG--WSHSLDK----PDTG 207 (323)
Q Consensus 147 ~~i~v~d-~~-~~~~~~~~~~-------~--~~v~~~~~~p~-~~~l~~~~~-~~i~i~d~~~--~~~~~~~----~~~~ 207 (323)
. ||- .+ ++.-..+... . ..+..++++|. ...++.+.. +.|..=+=.+ ....... ....
T Consensus 93 ~---v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~~S~DgG~TW~~~~~~~~~~~~~~ 169 (789)
T 1sqj_A 93 A---FYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIWKSSDRAKTWTNVTSIPDAFTNGI 169 (789)
T ss_dssp E---EEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEEEESSTTSSCEEETTSCCCCSTTT
T ss_pred E---EEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEEEECCCCcccCCCccCccccCCCC
Confidence 2 333 33 2222222110 1 13567888884 445555553 3432211112 2222111 1124
Q ss_pred cEEEEEEcC-CCCEEEEEecC
Q psy11524 208 SVYDLVWSN-DATQIAGACAN 227 (323)
Q Consensus 208 ~v~~~~~~~-~~~~l~~~~~d 227 (323)
.+..+.++| ++..++.+..+
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESS
T ss_pred CeEEEEECCCCCCEEEEEEcC
Confidence 578899998 44566666654
No 365
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=40.41 E-value=75 Score=20.74 Aligned_cols=60 Identities=7% Similarity=-0.020 Sum_probs=29.3
Q ss_pred CCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEeccc
Q psy11524 218 ATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSH 284 (323)
Q Consensus 218 ~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~ 284 (323)
|.+.+.-..|| +.+|+...+..+-.. -......-..+.+..+| .+.+.+.++. .+|....
T Consensus 24 g~~~L~~q~dGNLvL~~~~~~~~vWss-nt~~~~~~~~l~l~~dG-----NLVl~d~~~~-~iW~S~t 84 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKGSKTNIVWES-GTSGRGQHCFMRLGHSG-----ELDITDDRLN-TVFVSNT 84 (113)
T ss_dssp TTEEEEECTTSCEEEEETTTTEEEEEC-CCTTSCSSCEEEECTTS-----CEEEECTTSC-EEEECSC
T ss_pred CCEEEEEcCCCEEEEEECCCCEEEEEC-CcccCCcCEEEEEeCCC-----cEEEECCCCC-EEEECCC
Confidence 44444445555 666654223333320 01111122456777775 5667776654 4787654
No 366
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=38.88 E-value=1.5e+02 Score=23.65 Aligned_cols=179 Identities=12% Similarity=-0.002 Sum_probs=94.7
Q ss_pred CCCCCEEEEEcCCCceEeeeEEeCC---C-----Ceee--EeecCCCceeEEEEecCCCEEEEEeC-CeEEEEe---CCC
Q psy11524 131 CSSTDLILSGGEDCKYKASFVWDTD---G-----RQLY--SSLTHDHPISSLAWAPGGDMFAVGSY-NTLRLCD---KVG 196 (323)
Q Consensus 131 ~~~~~~l~~~~~d~~i~~i~v~d~~---~-----~~~~--~~~~~~~~v~~~~~~p~~~~l~~~~~-~~i~i~d---~~~ 196 (323)
-|+...+++.+.+|.|+ --.+. . +-.. .+... ..+..+........++..+. |.++-+. +..
T Consensus 5 i~~e~~~v~~T~~G~iK---r~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~ 80 (312)
T 1suu_A 5 MQKENIVVMLTKKGFLK---RLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKD 80 (312)
T ss_dssp ---CEEEEEEETTCBEE---EEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC
T ss_pred cCCCCEEEEEeCCCEEE---EeEHHHhhccccCCCCceecccCCC-CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCC
Confidence 35667888899999999 55441 1 1111 12222 33444444444445555555 6555444 321
Q ss_pred C-------eee-e-cCCCCccEEEEEEcC---CCCEEEEEecCc-EEEEEcCC-------CceeeeecCCCCccceEEEE
Q psy11524 197 W-------SHS-L-DKPDTGSVYDLVWSN---DATQIAGACANV-IHIFDISS-------SSSSNVTAPLSHSHEITQLA 256 (323)
Q Consensus 197 ~-------~~~-~-~~~~~~~v~~~~~~~---~~~~l~~~~~d~-i~iwd~~~-------~~~~~~~~~~~~~~~v~~~~ 256 (323)
. .+. . .......+..+..-+ +..+|+..+..| ++...+.. |..... +.. ...+..+.
T Consensus 81 ~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~--L~~-~d~lv~~~ 157 (312)
T 1suu_A 81 SSRASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIK--LND-KDFVTSAE 157 (312)
T ss_dssp -------CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBC--CCT-TCCEEEEE
T ss_pred CCccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEe--cCC-CCEEEEEE
Confidence 1 100 0 111233455544332 456788889999 88776532 222222 343 34454444
Q ss_pred EccCCCCccceEEEEeCCCCeEEEecccc-----------cCCC-CccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 257 VNQTGSLQERHVAFIDKNRDLYLSMWSHS-----------LDKP-DTGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 257 ~~p~g~~~d~~l~~~~~~~~~~~~~~~~~-----------~~~~-~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
..... ..+.+.+..|....+..... .... .+..|.++..-+++..|++.+..|..+...+
T Consensus 158 ~~~~~----~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~ 229 (312)
T 1suu_A 158 IVFKD----EKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNM 229 (312)
T ss_dssp EECTT----CEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEG
T ss_pred EeCCC----CEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEH
Confidence 44333 57888888888777766552 1111 1345666665556667888888998877665
No 367
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=34.67 E-value=1.1e+02 Score=20.90 Aligned_cols=68 Identities=22% Similarity=0.292 Sum_probs=37.2
Q ss_pred EEeCCCCeeeEee--cCCCceeEEEEec---CCCEEEEEeCC-eEEEEeCCCCeeeecCCCCccEEEEEEcCCC
Q psy11524 151 VWDTDGRQLYSSL--THDHPISSLAWAP---GGDMFAVGSYN-TLRLCDKVGWSHSLDKPDTGSVYDLVWSNDA 218 (323)
Q Consensus 151 v~d~~~~~~~~~~--~~~~~v~~~~~~p---~~~~l~~~~~~-~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (323)
|+|..++.++++. ........+.|.. +|..+.-|..- .+...|..+..........+.|.++.+...+
T Consensus 45 I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~d~~g~~~~~~~~~~~~V~~V~~~~g~ 118 (138)
T 3c12_A 45 ITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQTDTAGAKSKLATYVDAPVDSVTIGSDG 118 (138)
T ss_dssp EECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEEEETTCCEEEECEEEEEEEEEEEEETTE
T ss_pred EEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEEEECCCCEEEEeeeEEEEEEEEEecCCe
Confidence 8888888777765 2445567788875 23434333322 3333444444333222245668888876443
No 368
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=34.35 E-value=1.9e+02 Score=23.60 Aligned_cols=144 Identities=9% Similarity=0.007 Sum_probs=70.1
Q ss_pred CCCeEEEEECC-CCCEEEEEcCCC----ceEeeeEEeCCCCeeeEeec--------------CCCceeEEEEec-C-CCE
Q psy11524 122 DGLILKVAWCS-STDLILSGGEDC----KYKASFVWDTDGRQLYSSLT--------------HDHPISSLAWAP-G-GDM 180 (323)
Q Consensus 122 ~~~v~~~~~~~-~~~~l~~~~~d~----~i~~i~v~d~~~~~~~~~~~--------------~~~~v~~~~~~p-~-~~~ 180 (323)
...|.+|++.| +...|.++...| .|. ..+-.++.-..+.. ....|.++++.| + ...
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~---~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ 130 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVF---RSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGT 130 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEE---EESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTC
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEE---EeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCE
Confidence 45689999998 333344444444 343 33222322222111 112477889987 2 444
Q ss_pred EEEEeC-CeEEEEeCCCCeeeecC-------------------CCCccEEEEEEcC-CCCEEEEEecCc-EEEEEcCCCc
Q psy11524 181 FAVGSY-NTLRLCDKVGWSHSLDK-------------------PDTGSVYDLVWSN-DATQIAGACANV-IHIFDISSSS 238 (323)
Q Consensus 181 l~~~~~-~~i~i~d~~~~~~~~~~-------------------~~~~~v~~~~~~~-~~~~l~~~~~d~-i~iwd~~~~~ 238 (323)
+.++.. +.|...+-.+..-.... .....+.++.++| +...|..+..++ |...+ ..++
T Consensus 131 l~~g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~ 209 (394)
T 3b7f_A 131 WYAGTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGT 209 (394)
T ss_dssp EEEEEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTS
T ss_pred EEEEecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCC
Confidence 555544 56665554333222110 1123578999998 344566665555 65543 2232
Q ss_pred eeeeecC--CC---------CccceEEEEEccCCCCccceEEEEe
Q psy11524 239 SSNVTAP--LS---------HSHEITQLAVNQTGSLQERHVAFID 272 (323)
Q Consensus 239 ~~~~~~~--~~---------~~~~v~~~~~~p~g~~~d~~l~~~~ 272 (323)
.-..... .. ....+..++++|... +.|.+..
T Consensus 210 tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~---~~l~vg~ 251 (394)
T 3b7f_A 210 DWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAP---DILYQQN 251 (394)
T ss_dssp SCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSST---TEEEEEE
T ss_pred CceECCCCccccccCCCccccCcceeEEEECCCCC---CEEEEEc
Confidence 2221100 00 013488899998631 4555544
No 369
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=32.92 E-value=2.8e+02 Score=25.21 Aligned_cols=217 Identities=8% Similarity=0.058 Sum_probs=106.5
Q ss_pred CEEEEE-EcCCCCeEEEEee----CCeEEEEeCCCCceeE---ee-ccCC------CeEEEEECCCCCEEEEEc------
Q psy11524 83 PVYSAA-WSPDSNKVLLTQA----KSLVIKPLSPNNKATK---WQ-AHDG------LILKVAWCSSTDLILSGG------ 141 (323)
Q Consensus 83 ~v~~~~-~sp~~~~l~~~~~----~~~~v~~~~~~~~~~~---~~-~~~~------~v~~~~~~~~~~~l~~~~------ 141 (323)
....+. ++|++++++++-+ +-..++++|+.++... +. ..+. ....++|..+...+++..
T Consensus 130 ~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 130 AYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCB
T ss_pred EEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCc
Confidence 345566 8999999887743 4457899998776221 11 1111 113447874444443321
Q ss_pred -CCCceEeeeEEeCCC---CeeeEeecCCCce-eEEEEecCCCE-----EEEEeC---C-eEEEEeCCC--Ce-eeecCC
Q psy11524 142 -EDCKYKASFVWDTDG---RQLYSSLTHDHPI-SSLAWAPGGDM-----FAVGSY---N-TLRLCDKVG--WS-HSLDKP 204 (323)
Q Consensus 142 -~d~~i~~i~v~d~~~---~~~~~~~~~~~~v-~~~~~~p~~~~-----l~~~~~---~-~i~i~d~~~--~~-~~~~~~ 204 (323)
..+.-+.++.|.+-+ +-...+......+ .+...++++++ +++.+. . .+++.|... .. .....+
T Consensus 210 ~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 289 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMP 289 (711)
T ss_dssp CTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSC
T ss_pred CcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecC
Confidence 112122344887732 2223333333332 34455666652 444432 3 577777652 23 223222
Q ss_pred CCccEEEEEEcCCCCEEEEE----------ecCc-EEEEEcCCCc-------eeeeecCCCCccceEEEEEccCCCCccc
Q psy11524 205 DTGSVYDLVWSNDATQIAGA----------CANV-IHIFDISSSS-------SSNVTAPLSHSHEITQLAVNQTGSLQER 266 (323)
Q Consensus 205 ~~~~v~~~~~~~~~~~l~~~----------~~d~-i~iwd~~~~~-------~~~~~~~~~~~~~v~~~~~~p~g~~~d~ 266 (323)
.... +..++++.+++.. ...+ |...|+.++. ....+-.......+..+.|..+ .
T Consensus 290 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~ 361 (711)
T 4hvt_A 290 SDAT---LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-----R 361 (711)
T ss_dssp TTCE---EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-----C
T ss_pred Ccce---EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-----E
Confidence 2222 2344566555532 1345 8888887632 1111102334557788888876 4
Q ss_pred eEEEEeCCCC--eEEEecccc---c---CCCC-ccceeEEEEeeCCCeeE
Q psy11524 267 HVAFIDKNRD--LYLSMWSHS---L---DKPD-TGSVYDLVWSSDATQIA 307 (323)
Q Consensus 267 ~l~~~~~~~~--~~~~~~~~~---~---~~~~-~~~v~~~~~s~~g~~l~ 307 (323)
.+.....++. +.+++...+ . .... .+.+...+.++++..++
T Consensus 362 l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~ 411 (711)
T 4hvt_A 362 VFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEAL 411 (711)
T ss_dssp EEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEE
T ss_pred EEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEE
Confidence 6666665654 344443321 1 1121 24566666667765443
No 370
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=31.11 E-value=2e+02 Score=22.82 Aligned_cols=180 Identities=11% Similarity=0.011 Sum_probs=91.1
Q ss_pred CCCCEEEEEcCCCceEeeeEEeCCC---C-----ee--eEeecCCCceeEEEEecCCCE-EEEEeCCeEEE---EeCCCC
Q psy11524 132 SSTDLILSGGEDCKYKASFVWDTDG---R-----QL--YSSLTHDHPISSLAWAPGGDM-FAVGSYNTLRL---CDKVGW 197 (323)
Q Consensus 132 ~~~~~l~~~~~d~~i~~i~v~d~~~---~-----~~--~~~~~~~~~v~~~~~~p~~~~-l~~~~~~~i~i---~d~~~~ 197 (323)
|+...+++.+.+|.|+ --.++. . -. ..+... ..+..+........ ++..+.|.++- +++...
T Consensus 1 ~~e~~~v~~T~~G~iK---r~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~ 76 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVK---YQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEA 76 (307)
T ss_dssp CCCEEEEEEETTSEEE---EEECC---------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCC
T ss_pred CCCcEEEEEeCCCEEE---EeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCC
Confidence 4556788889999998 444421 0 11 112222 23333333333344 44444464443 444311
Q ss_pred -----eee---ec-CCCCccEEEEEEc---CCCCEEEEEecCc-EEEEEcCCC-----ceeeeecCCCCccceEEEEEcc
Q psy11524 198 -----SHS---LD-KPDTGSVYDLVWS---NDATQIAGACANV-IHIFDISSS-----SSSNVTAPLSHSHEITQLAVNQ 259 (323)
Q Consensus 198 -----~~~---~~-~~~~~~v~~~~~~---~~~~~l~~~~~d~-i~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~p 259 (323)
-.. .+ ......|..+..- .++.+++..+.+| ++--.+..- .-+..+++... ..+..+....
T Consensus 77 ~~~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~ 155 (307)
T 1zi0_A 77 TRGARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTS 155 (307)
T ss_dssp CSSSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEEC
T ss_pred CCCCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeC
Confidence 111 11 1233456555432 3556889999999 888865321 11111113333 4444444433
Q ss_pred CCCCccceEEEEeCCCCeEEEecccc-----------cCCC-CccceeEEEEeeCCCeeEeeecCCeEEEEEe
Q psy11524 260 TGSLQERHVAFIDKNRDLYLSMWSHS-----------LDKP-DTGSVYDLVWSSDATQIAGACANGSLLLGTI 320 (323)
Q Consensus 260 ~g~~~d~~l~~~~~~~~~~~~~~~~~-----------~~~~-~~~~v~~~~~s~~g~~l~s~~~dg~i~~~~l 320 (323)
.. ..|.+....|....+..... .... .++.|.++...+++..|+..+..|.++-..+
T Consensus 156 ~~----~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 156 GE----DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp TT----CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECG
T ss_pred CC----CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEH
Confidence 33 57888888888776665442 1111 1355666655555667888888888776544
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=23.81 E-value=2.6e+02 Score=21.74 Aligned_cols=189 Identities=9% Similarity=0.035 Sum_probs=99.9
Q ss_pred CCeEEEEECCCCCEEEEEcCCCceEeeeEEeCC-CCeeeEeecCCCceeEEEEec-CCCEEEEEeC-CeEEEEeCCCC--
Q psy11524 123 GLILKVAWCSSTDLILSGGEDCKYKASFVWDTD-GRQLYSSLTHDHPISSLAWAP-GGDMFAVGSY-NTLRLCDKVGW-- 197 (323)
Q Consensus 123 ~~v~~~~~~~~~~~l~~~~~d~~i~~i~v~d~~-~~~~~~~~~~~~~v~~~~~~p-~~~~l~~~~~-~~i~i~d~~~~-- 197 (323)
+.+..+.-......|+.-+..|.++.+.++++. .+... +......|..+.... +..+++..+. |.++-..+...
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~-ll~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~ 102 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVS-LKSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEY 102 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECC-CSSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTT
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccc-cCCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhh
Confidence 344444444444566667778888866666652 11111 222345566664421 4567888887 58888775422
Q ss_pred ---eee-ecCCCCccEEEEEEcCCCCEEEEEecCc-EEEEEcCC----C---ceeeeecCCCCccceEEEEEccCCCCcc
Q psy11524 198 ---SHS-LDKPDTGSVYDLVWSNDATQIAGACANV-IHIFDISS----S---SSSNVTAPLSHSHEITQLAVNQTGSLQE 265 (323)
Q Consensus 198 ---~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~-i~iwd~~~----~---~~~~~~~~~~~~~~v~~~~~~p~g~~~d 265 (323)
... ......+.+..+........++..+..| +..++... + +=+.-+.+.. ...|..+...+++
T Consensus 103 ~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~---- 177 (276)
T 3no0_A 103 KAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGE---- 177 (276)
T ss_dssp CSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSC----
T ss_pred hcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCC----
Confidence 111 1111344566666665666788888888 77766422 1 1111111222 2345444443443
Q ss_pred ceEEEEeCCCCeEEEecccccCC----------CCccceeEEEEeeCCCeeEeeecCCeEEE
Q psy11524 266 RHVAFIDKNRDLYLSMWSHSLDK----------PDTGSVYDLVWSSDATQIAGACANGSLLL 317 (323)
Q Consensus 266 ~~l~~~~~~~~~~~~~~~~~~~~----------~~~~~v~~~~~s~~g~~l~s~~~dg~i~~ 317 (323)
..+.+....|......+...... ...+.+..+....+...++..+.+|.+..
T Consensus 178 ~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~G~~ir 239 (276)
T 3no0_A 178 PYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKNGKAFY 239 (276)
T ss_dssp SEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETTSCEEE
T ss_pred CEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCCCeEEE
Confidence 67888888888877776553100 11233444333333345666677777665
No 372
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=21.78 E-value=1.7e+02 Score=18.90 Aligned_cols=81 Identities=7% Similarity=0.046 Sum_probs=37.5
Q ss_pred CCCEEEEEecCc-EEEEEcCCCceeeeecCCCCccceEEEEEccCCCCccceEEEEeCCCCeEEEecccccCCCCcccee
Q psy11524 217 DATQIAGACANV-IHIFDISSSSSSNVTAPLSHSHEITQLAVNQTGSLQERHVAFIDKNRDLYLSMWSHSLDKPDTGSVY 295 (323)
Q Consensus 217 ~~~~l~~~~~d~-i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~p~g~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~ 295 (323)
+|++.+.-..|| +.+++... +-.. -......-..+.+..+| .+.+.+.++...+|.... .........
T Consensus 19 ~g~~~L~~q~dGnLvl~~~~~---vW~s-nt~~~~~~~~l~l~~dG-----NLVl~~~~~~~~vW~S~t--~~~~~~~~~ 87 (111)
T 3mez_A 19 YESAAFVMQGDCNLVLYNEAG---GFQS-NTHGRGVDCTLRLNNRG-----QLEIHSANSNTPVWVYPR--SVNTVRGNY 87 (111)
T ss_dssp ETTEEEEECTTSCEEEECSSC---CEEC-CCTTSCSSCEEEECTTS-----CEEEECSSCSSCSEEESS--SCCCCSSCC
T ss_pred cCCEEEEEccCCeEEEECCCC---EEEC-CcccCCcCEEEEEcCCC-----cEEEEeCCCCEEEEEecc--ccCCCCcCE
Confidence 345555555566 66665432 2210 01111122356677765 566777766555775442 100011223
Q ss_pred EEEEeeCCCeeEe
Q psy11524 296 DLVWSSDATQIAG 308 (323)
Q Consensus 296 ~~~~s~~g~~l~s 308 (323)
.+.+.+||++++-
T Consensus 88 ~l~Lq~dGNlvly 100 (111)
T 3mez_A 88 AATLGPDQHVTIY 100 (111)
T ss_dssp EEEECTTSCEEEE
T ss_pred EEEECCCCeEEEe
Confidence 4555556654443
Done!