Query psy11528
Match_columns 140
No_of_seqs 110 out of 580
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 20:43:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11528.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11528hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f9m_A Glucokinase; hexokinase 100.0 1.9E-50 6.4E-55 350.0 11.0 126 6-136 156-281 (470)
2 3hm8_A Hexokinase-3; glucose, 100.0 2.8E-47 9.7E-52 328.3 10.8 126 6-136 132-257 (445)
3 3o8m_A Hexokinase; rnaseh-like 100.0 3E-43 1E-47 305.9 10.9 127 6-136 157-287 (485)
4 1bdg_A Hexokinase; phosphotran 100.0 2E-40 7E-45 285.3 11.5 126 5-135 143-268 (451)
5 1cza_N Hexokinase type I; stru 100.0 1.3E-38 4.6E-43 292.7 11.9 126 5-135 602-727 (917)
6 2yhx_A Hexokinase B; transfera 100.0 1.7E-34 5.7E-39 249.2 7.9 125 6-136 137-263 (457)
7 1cza_N Hexokinase type I; stru 100.0 4.4E-31 1.5E-35 242.8 11.0 125 6-135 155-279 (917)
8 1zbs_A Hypothetical protein PG 95.4 0.04 1.4E-06 43.4 7.0 61 25-90 64-125 (291)
9 1zxo_A Conserved hypothetical 95.3 0.028 9.5E-07 44.3 5.6 61 25-90 62-123 (291)
10 2ch5_A NAGK protein; transfera 95.2 0.044 1.5E-06 43.6 6.7 65 24-91 74-138 (347)
11 2qm1_A Glucokinase; alpha-beta 95.1 0.032 1.1E-06 44.0 5.4 53 33-92 96-153 (326)
12 2ap1_A Putative regulator prot 93.4 0.13 4.3E-06 40.8 5.6 54 32-92 108-165 (327)
13 3vgl_A Glucokinase; ROK family 92.0 0.27 9.3E-06 39.1 5.8 53 33-92 85-141 (321)
14 4db3_A Glcnac kinase, N-acetyl 91.9 0.24 8.2E-06 39.6 5.4 54 32-92 108-165 (327)
15 2hoe_A N-acetylglucosamine kin 91.0 0.52 1.8E-05 38.3 6.7 53 33-92 177-231 (380)
16 3mcp_A Glucokinase; structural 90.5 0.64 2.2E-05 38.4 6.8 82 33-131 97-198 (366)
17 1z6r_A MLC protein; transcript 88.7 0.89 3E-05 37.1 6.3 54 32-92 174-231 (406)
18 2aa4_A Mannac kinase, putative 88.4 1.1 3.6E-05 34.6 6.3 53 33-92 85-140 (289)
19 1z05_A Transcriptional regulat 87.6 0.96 3.3E-05 37.4 5.9 53 33-92 197-253 (429)
20 2yhw_A Bifunctional UDP-N-acet 84.9 1.7 5.6E-05 34.6 5.8 54 32-92 119-176 (343)
21 2q2r_A Glucokinase 1, putative 83.8 2.3 8E-05 34.3 6.3 42 51-92 128-200 (373)
22 4htl_A Beta-glucoside kinase; 83.6 2.4 8.2E-05 33.1 6.1 54 32-92 85-142 (297)
23 3vov_A Glucokinase, hexokinase 81.8 3.9 0.00013 32.1 6.7 55 31-92 85-143 (302)
24 3htv_A D-allose kinase, alloki 81.4 3.1 0.00011 32.8 6.1 85 35-131 98-190 (310)
25 3epq_A Putative fructokinase; 80.2 4 0.00014 32.2 6.3 55 31-92 84-142 (302)
26 1sz2_A Glucokinase, glucose ki 79.9 3.5 0.00012 32.7 5.9 40 54-93 105-158 (332)
27 2gup_A ROK family protein; sug 79.7 2.7 9.3E-05 32.4 5.1 52 33-92 84-137 (292)
28 1woq_A Inorganic polyphosphate 75.0 6.9 0.00023 29.9 6.1 53 33-92 103-160 (267)
29 1zc6_A Probable N-acetylglucos 70.8 14 0.00047 28.6 7.1 35 54-90 104-138 (305)
30 3r8e_A Hypothetical sugar kina 70.2 6.4 0.00022 31.0 5.0 54 33-92 106-163 (321)
31 2e2o_A Hexokinase; acetate and 63.7 16 0.00055 28.0 6.1 55 24-85 63-118 (299)
32 1saz_A Probable butyrate kinas 43.8 26 0.00089 28.4 4.4 18 75-92 177-194 (381)
33 3lm2_A Putative kinase; struct 43.7 26 0.00089 26.7 4.2 36 55-92 95-130 (226)
34 1c1y_B Proto-onkogene serine/t 32.8 28 0.00095 22.8 2.3 26 32-58 20-45 (77)
35 2l05_A Serine/threonine-protei 32.1 31 0.001 23.5 2.5 26 32-58 36-61 (95)
36 2c8e_E Exoenzyme C3, mono-ADP- 31.6 50 0.0017 24.7 4.0 28 70-97 143-170 (211)
37 3ny5_A Serine/threonine-protei 31.0 30 0.001 23.6 2.3 28 32-60 32-59 (96)
38 2bov_B Mono-ADP-ribosyltransfe 26.8 61 0.0021 25.2 3.8 28 70-97 183-210 (251)
39 1wxm_A A-RAF proto-oncogene se 26.1 32 0.0011 23.0 1.8 26 32-58 26-51 (86)
40 3bw8_A Exoenzyme C3, mono-ADP- 26.0 71 0.0024 24.0 4.0 28 70-97 155-182 (217)
41 3ozb_A Methylthioadenosine pho 24.4 30 0.001 27.0 1.6 17 70-86 11-27 (259)
42 1g2o_A Purine nucleoside phosp 23.6 44 0.0015 26.2 2.4 18 69-86 22-39 (268)
43 3s5p_A Ribose 5-phosphate isom 22.3 94 0.0032 23.0 3.9 61 29-90 28-95 (166)
44 3odg_A Xanthosine phosphorylas 22.2 52 0.0018 26.2 2.6 15 72-86 31-45 (287)
45 1rrb_A RAF-1 RBD, RAF proto-on 22.0 56 0.0019 22.7 2.4 26 32-58 37-62 (107)
46 1qe5_A Pentosyltransferase; en 21.1 49 0.0017 25.9 2.2 16 71-86 26-41 (266)
47 1ojq_A ADP-ribosyltransferase; 20.6 1E+02 0.0034 23.0 3.9 28 70-97 147-176 (212)
48 3pg6_A E3 ubiquitin-protein li 20.5 30 0.001 25.7 0.8 19 30-48 86-104 (159)
49 1r45_A Exoenzyme C3, mono-ADP- 20.2 1.1E+02 0.0037 22.6 3.9 28 70-97 142-169 (204)
No 1
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=100.00 E-value=1.9e-50 Score=350.03 Aligned_cols=126 Identities=29% Similarity=0.593 Sum_probs=121.3
Q ss_pred CCceeeccCCCeEEEeeccceecCCCcCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccCCCCceEEEEecCCC
Q psy11528 6 KLSGMRCSESPGVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIEYLLPVPC 85 (140)
Q Consensus 6 ~f~~~q~si~~g~li~wtKgF~~~~~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~~~~~~iglIlGTGt 85 (140)
.||++|+++++|+|++|||||++++++|+||+++|++||+|++.++|+|+||||||||||+|++|.+++|+||+|+||||
T Consensus 156 SFP~~Q~sl~~g~Li~WTKGF~~~~v~G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~~~~~iGlI~GTGt 235 (470)
T 3f9m_A 156 SFPVRHEDIDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDHQCEVGMIVGTGC 235 (470)
T ss_dssp CSCEEEEETTEEEECCCCTTCCCBTCBTSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSSE
T ss_pred eccccccCCCceEEEeccccccCCCcCCccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCCCCceEEEEEecCC
Confidence 59999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred ceeEEeecCCCCccccCCCCCCCCcEEEEeccCcccCCCCCCCCCcccccc
Q psy11528 86 GYALQQAFDNIALPIYEGRSGQADHLVIRKAWVHFQPKQGLEFCPQYSLRF 136 (140)
Q Consensus 86 Na~Y~e~~~~i~~~k~~~~~~~~~~miINtEwG~Fg~~g~L~~~~T~fD~~ 136 (140)
|+||+|++++|+ |+++ +.++||||||||+||++++|+.++|+||+.
T Consensus 236 Na~Y~E~~~~I~--k~~~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~ 281 (470)
T 3f9m_A 236 NACYMEEMQNVE--LVEG---DEGRMCVNTEWGAFGDSGELDEFLLEYDRL 281 (470)
T ss_dssp EEEEEEEGGGCT--TSSC---CSSEEEEECCGGGTTTTSTTGGGCCHHHHH
T ss_pred ceEEeeeccccc--cccC---CCCcEEEeechhhcCCCcccCCCCCcccHH
Confidence 999999999999 9876 567899999999999999998899999984
No 2
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-47 Score=328.30 Aligned_cols=126 Identities=29% Similarity=0.530 Sum_probs=120.5
Q ss_pred CCceeeccCCCeEEEeeccceecCCCcCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccCCCCceEEEEecCCC
Q psy11528 6 KLSGMRCSESPGVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIEYLLPVPC 85 (140)
Q Consensus 6 ~f~~~q~si~~g~li~wtKgF~~~~~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~~~~~~iglIlGTGt 85 (140)
.||++|+++++|+|++|||||++++++|+||+++|++|++|++.++|+|+||+|||||||+|++|.+++|+||+|+||||
T Consensus 132 SFP~~Q~sl~~g~Li~wtKGF~~~~~~G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~~~~~iglIlGTGt 211 (445)
T 3hm8_A 132 SFPCRQLGLDQGILLNWTKGFKASDCEGQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYEDPRCEIGLIVGTGT 211 (445)
T ss_dssp CSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTCTTEEEEEEESSSE
T ss_pred eeeeEeccCCceEEEEeeccccCCCCCCCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCCCCceEEEEEeCCc
Confidence 59999999999999999999999999999999999999999977999999999999999999999999999999999999
Q ss_pred ceeEEeecCCCCccccCCCCCCCCcEEEEeccCcccCCCCCCCCCcccccc
Q psy11528 86 GYALQQAFDNIALPIYEGRSGQADHLVIRKAWVHFQPKQGLEFCPQYSLRF 136 (140)
Q Consensus 86 Na~Y~e~~~~i~~~k~~~~~~~~~~miINtEwG~Fg~~g~L~~~~T~fD~~ 136 (140)
|+||+|++++|+ |+++ +.++||||||||+||++++|+.++|+||+.
T Consensus 212 Na~y~e~~~~i~--k~~~---~~~~miINtEwG~Fg~~~~l~~~~T~~D~~ 257 (445)
T 3hm8_A 212 NACYMEELRNVA--GVPG---DSGRMCINMEWGAFGDDGSLAMLSTRFDAS 257 (445)
T ss_dssp EEEEEEEGGGCT--TSCC---CSSEEEEECCGGGTTTTTTTTTTCCHHHHH
T ss_pred eEEEEEeccccc--ccCC---CCCcEEEEcchhhcCCCCCCcCCCCccchH
Confidence 999999999999 8865 457899999999999999998899999984
No 3
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=100.00 E-value=3e-43 Score=305.90 Aligned_cols=127 Identities=30% Similarity=0.458 Sum_probs=117.0
Q ss_pred CCceeeccCCCeEEEeeccceecCCCcCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccCCCCceEEEEecCCC
Q psy11528 6 KLSGMRCSESPGVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIEYLLPVPC 85 (140)
Q Consensus 6 ~f~~~q~si~~g~li~wtKgF~~~~~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~~~~~~iglIlGTGt 85 (140)
.||++|+++++|+|++|||||++++++|+||+++|+++++|++ ++|+|+||+|||||||++++|.++++.||+|+||||
T Consensus 157 SfP~~q~~i~~g~li~wtKGF~i~~~~G~dv~~~L~~al~r~g-l~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~ 235 (485)
T 3o8m_A 157 SYPASQKKINSGVLQRWTKGFDIEGVEGHDVVPMLQEQIEKLN-IPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGV 235 (485)
T ss_dssp CSCEECSBTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHTT-CCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSE
T ss_pred eeeEEEcccCCEEEeeccccccCCCcCCccHHHHHHHHHHhcC-CCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCc
Confidence 5899999999999999999999999999999999999999998 899999999999999999999999999999999999
Q ss_pred ceeEEeecCCCCccccCC----CCCCCCcEEEEeccCcccCCCCCCCCCcccccc
Q psy11528 86 GYALQQAFDNIALPIYEG----RSGQADHLVIRKAWVHFQPKQGLEFCPQYSLRF 136 (140)
Q Consensus 86 Na~Y~e~~~~i~~~k~~~----~~~~~~~miINtEwG~Fg~~g~L~~~~T~fD~~ 136 (140)
|+||+|++++|+ |+++ ..+.+++||||||||+|++. ++..++|+||+.
T Consensus 236 N~~y~e~~~~i~--k~~~~~~~~~~~~~~miINtEwG~F~~~-~~~lp~T~~D~~ 287 (485)
T 3o8m_A 236 NGAYYDVVSGIE--KLEGLLPEDIGPDSPMAINCEYGSFDNE-HLVLPRTKYDVI 287 (485)
T ss_dssp EEEEEEEGGGCG--GGTTTCCTTSCTTCEEEEECCGGGTTTT-CSSSCCCHHHHH
T ss_pred ceEEEeeccccc--cccccccccCCCCCcEEEEcccccCCCC-cccCCCCchhhH
Confidence 999999999999 8873 24456789999999999764 444579999984
No 4
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=100.00 E-value=2e-40 Score=285.31 Aligned_cols=126 Identities=31% Similarity=0.527 Sum_probs=119.8
Q ss_pred cCCceeeccCCCeEEEeeccceecCCCcCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccCCCCceEEEEecCC
Q psy11528 5 SKLSGMRCSESPGVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIEYLLPVP 84 (140)
Q Consensus 5 ~~f~~~q~si~~g~li~wtKgF~~~~~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~~~~~~iglIlGTG 84 (140)
..||+.|+++++|+|++|||||++++++|+||+++|+++++|++ ++|+|+||+|||+|||++++|.++++.||+|+|||
T Consensus 143 fsfPv~q~~~~~G~l~~wtKgf~~~~~~g~dv~~~L~~al~r~~-l~v~v~al~NDtv~tlla~~y~~~~~~iglIlGTG 221 (451)
T 1bdg_A 143 FSFPCVQKGLTHATLVRWTKGFSADGVEGHNVAELLQTELDKRE-LNVKCVAVVNDTVGTLASCALEDPKCAVGLIVGTG 221 (451)
T ss_dssp ECSCEEEETTTEEEECCCCTTCCCBTCTTSBHHHHHHHHHHTTT-CCEEEEEEECHHHHHHHHHHTTCTTEEEEEEESSS
T ss_pred EeeEeccccCCCeEEeccccccCCCCCCCCcHHHHHHHHHHHcC-CCcceEEEEEchHHHHHHhcccCCCcEEEEEEeCC
Confidence 36999999999999999999999999999999999999999998 99999999999999999999999999999999999
Q ss_pred CceeEEeecCCCCccccCCCCCCCCcEEEEeccCcccCCCCCCCCCccccc
Q psy11528 85 CGYALQQAFDNIALPIYEGRSGQADHLVIRKAWVHFQPKQGLEFCPQYSLR 135 (140)
Q Consensus 85 tNa~Y~e~~~~i~~~k~~~~~~~~~~miINtEwG~Fg~~g~L~~~~T~fD~ 135 (140)
+|+||+|+.+.|+ |+++. ..++|+||+|||+|+++++++.++|+||+
T Consensus 222 ~na~yve~~~~i~--~~~g~--~~g~m~In~EwG~f~~~~~~~~p~t~~D~ 268 (451)
T 1bdg_A 222 TNVAYIEDSSKVE--LMDGV--KEPEVVINTEWGAFGEKGELDCWRTQFDK 268 (451)
T ss_dssp EEEEEEEETTTCG--GGCSC--SSSEEEEECCGGGTTTTSTTTTTCCHHHH
T ss_pred cceEEEEcCcccc--CcCCC--ccCcEEEecCcccCCCcccccCCCCcchh
Confidence 9999999999999 88763 45789999999999999989888999995
No 5
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=100.00 E-value=1.3e-38 Score=292.66 Aligned_cols=126 Identities=30% Similarity=0.582 Sum_probs=119.6
Q ss_pred cCCceeeccCCCeEEEeeccceecCCCcCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccCCCCceEEEEecCC
Q psy11528 5 SKLSGMRCSESPGVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIEYLLPVP 84 (140)
Q Consensus 5 ~~f~~~q~si~~g~li~wtKgF~~~~~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~~~~~~iglIlGTG 84 (140)
..||+.|+++++|.|++|||||++++++|+||+++|+++++|++.++|+++||+|||||||++++|.++++.||+|+|||
T Consensus 602 fsfPv~q~~i~~~~L~~WtKgf~~~~~~g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~~~~~iglIlGTG 681 (917)
T 1cza_N 602 FSFPCQQTSLDAGILITWTKGFKATDCVGHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEEPTCEVGLIVGTG 681 (917)
T ss_dssp ECSCEEEEETTEEEECCCCTTCCCBSCTTSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTCTTEEEEEEESSS
T ss_pred eeccccccccCccEECceecccccCCcCCCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCCCCcEEEEEEeCC
Confidence 36999999999999999999999999999999999999999996699999999999999999999999999999999999
Q ss_pred CceeEEeecCCCCccccCCCCCCCCcEEEEeccCcccCCCCCCCCCccccc
Q psy11528 85 CGYALQQAFDNIALPIYEGRSGQADHLVIRKAWVHFQPKQGLEFCPQYSLR 135 (140)
Q Consensus 85 tNa~Y~e~~~~i~~~k~~~~~~~~~~miINtEwG~Fg~~g~L~~~~T~fD~ 135 (140)
||+||+|+.++|+ ++.+ ..++|+||+|||+||++++|++++|+||+
T Consensus 682 ~na~y~e~~~~i~--~~~g---~~g~m~In~EwG~fg~~~~l~~~~T~~D~ 727 (917)
T 1cza_N 682 SNACYMEEMKNVE--MVEG---DQGQMCINMEWGAFGDNGCLDDIRTHYDR 727 (917)
T ss_dssp EEEEEEEETTTCT--TSSC---CSSEEEEECCGGGTTTTSTTTTTCCHHHH
T ss_pred eeEEEEEcCcccc--CcCC---CcCcEEEecccccCCCcccccCCCCchhh
Confidence 9999999999999 7764 45789999999999999999999999995
No 6
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=100.00 E-value=1.7e-34 Score=249.18 Aligned_cols=125 Identities=14% Similarity=0.077 Sum_probs=115.4
Q ss_pred CCceeeccCCCeEEEeeccceecCCCcCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccCCCCceEEEEecCCC
Q psy11528 6 KLSGMRCSESPGVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIEYLLPVPC 85 (140)
Q Consensus 6 ~f~~~q~si~~g~li~wtKgF~~~~~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~~~~~~iglIlGTGt 85 (140)
.||+.|+++++|+|++|||||++++++ ||+++|+++++|++ ++++|++|+|||+||+++++|.++++.||+|+|||+
T Consensus 137 s~P~~q~~~~~g~l~~wtKgf~i~~~~--~v~~~L~~~l~r~g-lpv~vval~NDa~~tll~e~~~~~~~~iglilGTGv 213 (457)
T 2yhx_A 137 XEAGAKEXVIKGQITXQAXAFSLAXLX--KLISAMXNAXFPAG-DXXXSVADIXDSHGILXXVNYTDAXIKMGIIFGSGV 213 (457)
T ss_dssp CSCCCCSBTTCCBCSSCCTTCCCSSCS--SBHHHHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSE
T ss_pred EEEEEEeecCceEEEeeccCCCcchhH--HHHHHHHHhHhhcC-CcceeEEEEecchhhccchhhcCCccEEEEEECcEE
Confidence 599999999999999999999999988 99999999999998 899999999999999999999999999999999999
Q ss_pred ceeEEeecCCCCccccCCC-CC-CCCcEEEEeccCcccCCCCCCCCCcccccc
Q psy11528 86 GYALQQAFDNIALPIYEGR-SG-QADHLVIRKAWVHFQPKQGLEFCPQYSLRF 136 (140)
Q Consensus 86 Na~Y~e~~~~i~~~k~~~~-~~-~~~~miINtEwG~Fg~~g~L~~~~T~fD~~ 136 (140)
|+||+|+.++|+ |+++. .+ ..++|+||||||+|++++++. ++|+||+.
T Consensus 214 gg~~i~~~~~i~--kl~~~~~~~~~g~~~in~EwG~f~~~~~~l-p~t~~D~~ 263 (457)
T 2yhx_A 214 NAAYWCDSTXIG--DAADGGXXGGAGXMXICCDQSSFRKAFPSL-PQIXYLXT 263 (457)
T ss_dssp EEEEEECGGGSS--CTTSCSSSCSSCCEEEECCCTTTTTTCSSS-CCCHHHHH
T ss_pred EEEEEECCCccc--ccccccccccCCceEEEEEcccCCCCCCcC-Cccccccc
Confidence 999999999999 88653 23 467899999999999988874 49999874
No 7
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=99.97 E-value=4.4e-31 Score=242.83 Aligned_cols=125 Identities=30% Similarity=0.591 Sum_probs=118.4
Q ss_pred CCceeeccCCCeEEEeeccceecCCCcCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccCCCCceEEEEecCCC
Q psy11528 6 KLSGMRCSESPGVLVRWTKGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIEYLLPVPC 85 (140)
Q Consensus 6 ~f~~~q~si~~g~li~wtKgF~~~~~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~~~~~~iglIlGTGt 85 (140)
.||+.|+++++|+|++|||||++++++|+||+++|+++++|++++++++++|+|||+||+++.+|.++++.||+|+|||+
T Consensus 155 s~P~~q~~~~~G~l~~wtkgfni~~~~g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~~~~~iglilGTGv 234 (917)
T 1cza_N 155 SFPCQQSKIDEAILITWTKRFKASGVEGADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDDQHCEVGLIIGTGT 234 (917)
T ss_dssp CSCEECSSTTCCEECCCCTTCCCBTCTTSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHCTTEEEEEEESSSE
T ss_pred ccccccCcCCceEEEecccCCCCCcccCCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccCCCcEEEEEEECCc
Confidence 59999999999999999999999999999999999999999987899999999999999999999999999999999999
Q ss_pred ceeEEeecCCCCccccCCCCCCCCcEEEEeccCcccCCCCCCCCCccccc
Q psy11528 86 GYALQQAFDNIALPIYEGRSGQADHLVIRKAWVHFQPKQGLEFCPQYSLR 135 (140)
Q Consensus 86 Na~Y~e~~~~i~~~k~~~~~~~~~~miINtEwG~Fg~~g~L~~~~T~fD~ 135 (140)
|+||+++.++|+ ++.+. .++|+||+|||+|++++.|+.++|+||.
T Consensus 235 ngg~i~~g~~i~--~~~G~---~g~~~in~E~G~f~~~~~l~~~~t~~D~ 279 (917)
T 1cza_N 235 NACYMEELRHID--LVEGD---EGRMCINTEWGAFGDDGSLEDIRTEFDR 279 (917)
T ss_dssp EEEEEEEGGGCT--TSSCC---SSEEEEECCGGGTTTTTTTTTTCCHHHH
T ss_pred ceEEEecCcccc--cccCC---CCceEEeccccccCCccccccCCCcccc
Confidence 999999999999 88762 4689999999999999999889999995
No 8
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=95.45 E-value=0.04 Score=43.40 Aligned_cols=61 Identities=18% Similarity=0.180 Sum_probs=41.3
Q ss_pred ceecCCCcCchHHHHHHHHHHHhCCCCc-eEEEEEechHHHHHhcccCCCCceEEEEecCCCceeEE
Q psy11528 25 GFKCEGVVGANVVELLQQALVRRSNFPV-NVVAILNDTAGCLVSCAYDHKHCKIEYLLPVPCGYALQ 90 (140)
Q Consensus 25 gF~~~~~~G~dv~~lL~~al~r~~~~~v-~v~aivNDTVatlls~~y~~~~~~iglIlGTGtNa~Y~ 90 (140)
|+.+++.+ .+-...|++.|+++. +. ..+.|.||..+..++.. ..+..+.+|+|||.+++.+
T Consensus 64 gig~pG~~-~~~~~~l~~~l~~~~--~~~~pv~v~NDa~~aa~ge~--g~~~~v~v~~GTGigg~~i 125 (291)
T 1zbs_A 64 YFYGAGCT-PAKAPMLNEALDSML--PHCDRIEVAGDMLGAARALC--GDSEGIACILGTGSNSCLF 125 (291)
T ss_dssp EEEETTCC-TTTHHHHHHHHHHHS--TTCSEEEEECHHHHHHHHHT--TTSCEEEEEESSSEEEEEE
T ss_pred EEECCCCC-hHHHHHHHHHHHHhc--CCCCcEEEeCcHHHHHHhhc--CCCCcEEEEecCChheEEE
Confidence 55566654 222234666666653 33 35788999999888753 4467789999999986665
No 9
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=95.28 E-value=0.028 Score=44.31 Aligned_cols=61 Identities=15% Similarity=0.176 Sum_probs=39.5
Q ss_pred ceecCCCcCchHHHHHHHHHHHhCCCCc-eEEEEEechHHHHHhcccCCCCceEEEEecCCCceeEE
Q psy11528 25 GFKCEGVVGANVVELLQQALVRRSNFPV-NVVAILNDTAGCLVSCAYDHKHCKIEYLLPVPCGYALQ 90 (140)
Q Consensus 25 gF~~~~~~G~dv~~lL~~al~r~~~~~v-~v~aivNDTVatlls~~y~~~~~~iglIlGTGtNa~Y~ 90 (140)
|+.+++.+ .+-...|.+.|+++. +. ..+.|.||..+.+++.. ..+.-+.+|+|||.+++.+
T Consensus 62 gig~pG~~-~~~~~~l~~~l~~~~--~~~~pv~v~NDa~~aalge~--g~~~~v~v~~GTGi~g~gi 123 (291)
T 1zxo_A 62 YFYGAGCT-PEKAPVLRRAIADSL--PVIGNIKANSDMLAAAHGLC--GQKAGIACILGTGSNSCFY 123 (291)
T ss_dssp EEECTTCC-TTTTHHHHHHHHHHS--CCCSCCEEECSHHHHHHHTT--TTSCBEEEEESSSEEEEEE
T ss_pred EEEcCCCC-HHHHHHHHHHHHHhc--CCCceEEEECcHHHHHHhhc--CCCCcEEEEeCCChheEEE
Confidence 55566653 222224555565553 32 23678999999888764 3456788999999985555
No 10
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=95.20 E-value=0.044 Score=43.65 Aligned_cols=65 Identities=17% Similarity=0.171 Sum_probs=44.4
Q ss_pred cceecCCCcCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccCCCCceEEEEecCCCceeEEe
Q psy11528 24 KGFKCEGVVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIEYLLPVPCGYALQQ 91 (140)
Q Consensus 24 KgF~~~~~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~~~~~~iglIlGTGtNa~Y~e 91 (140)
=|+.+++.+..+-...|.+.|+++-......+.|.||+.+..++ .+ .+..+-+++|||.+++.+.
T Consensus 74 igi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a-~~--~~~~v~v~~GTGig~~~v~ 138 (347)
T 2ch5_A 74 LGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIAT-AT--PDGGVVLISGTGSNCRLIN 138 (347)
T ss_dssp EEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHH-HC--SSCEEEEEESSSEEEEEEC
T ss_pred EEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHh-hC--CCCcEEEEEcCCceeEEEc
Confidence 46778887654434456666666621001235789999999988 44 3567889999999998774
No 11
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=95.06 E-value=0.032 Score=43.98 Aligned_cols=53 Identities=23% Similarity=0.207 Sum_probs=41.3
Q ss_pred Cc-hHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccC----CCCceEEEEecCCCceeEEee
Q psy11528 33 GA-NVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 33 G~-dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~----~~~~~iglIlGTGtNa~Y~e~ 92 (140)
+. ++.+.|++.+ + +| +.|.||+.+..++-.+. ..+..+.+++|||..++++..
T Consensus 96 ~~~~l~~~l~~~~---~-~p---v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtGiG~giv~~ 153 (326)
T 2qm1_A 96 TVQPVKEQIESAL---G-IP---FALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAA 153 (326)
T ss_dssp SCBCHHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEET
T ss_pred CCchHHHHHHHHh---C-CC---EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEEEC
Confidence 45 7888888776 3 44 56799999988876543 457789999999999999965
No 12
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=93.41 E-value=0.13 Score=40.84 Aligned_cols=54 Identities=22% Similarity=0.166 Sum_probs=41.2
Q ss_pred cCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccC----CCCceEEEEecCCCceeEEee
Q psy11528 32 VGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 32 ~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~----~~~~~iglIlGTGtNa~Y~e~ 92 (140)
.+.++.+.|++.+ + +| +.|.||..+..++-.+. ..+..+.+++|||..++++..
T Consensus 108 ~~~~l~~~l~~~~---~-~p---v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtGiG~giv~~ 165 (327)
T 2ap1_A 108 SGKPLRADLSARL---D-RD---VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVLN 165 (327)
T ss_dssp TTSCHHHHHHHHH---T-SC---EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSSEEEEEEET
T ss_pred CCCChHHHHHHHH---C-CC---EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCcEEEEEEEC
Confidence 4567788888766 3 44 57899999988776543 346788999999999998865
No 13
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=91.97 E-value=0.27 Score=39.06 Aligned_cols=53 Identities=15% Similarity=0.100 Sum_probs=40.9
Q ss_pred CchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhccc----CCCCceEEEEecCCCceeEEee
Q psy11528 33 GANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAY----DHKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 33 G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y----~~~~~~iglIlGTGtNa~Y~e~ 92 (140)
+.++.+.|++.+ + +| +.|.||..+..++-.+ ...+..+-+.+|||..++++..
T Consensus 85 ~~~l~~~l~~~~---~-~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~gii~~ 141 (321)
T 3vgl_A 85 HEPLKDKVEQRV---G-LP---VVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIG 141 (321)
T ss_dssp EECHHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEET
T ss_pred CCCHHHHHhhhh---C-CC---EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcceEEEEEEC
Confidence 457788888776 3 55 5679999988776544 3457789999999999999975
No 14
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=91.91 E-value=0.24 Score=39.61 Aligned_cols=54 Identities=22% Similarity=0.196 Sum_probs=42.0
Q ss_pred cCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccC----CCCceEEEEecCCCceeEEee
Q psy11528 32 VGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 32 ~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~----~~~~~iglIlGTGtNa~Y~e~ 92 (140)
.+.++.+.|++.+ + +| +.|.||..+..++-.+. ..+..+.+.+|||..++++..
T Consensus 108 ~~~~l~~~l~~~~---~-~p---V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtGiG~gii~~ 165 (327)
T 4db3_A 108 KGKPLRADLEAKI---G-RS---VKIENDANCFALSEAWDEELQDAPSVMGLILGTGFGGGLIYE 165 (327)
T ss_dssp TTSCHHHHHHHHH---S-SC---CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSSEEEEEEET
T ss_pred cCCCHHHHHHHHH---C-CC---EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCccceEEEEEC
Confidence 4568888888776 3 55 46799999888776654 346778899999999999975
No 15
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=91.02 E-value=0.52 Score=38.33 Aligned_cols=53 Identities=17% Similarity=0.067 Sum_probs=41.3
Q ss_pred CchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccCCC--CceEEEEecCCCceeEEee
Q psy11528 33 GANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHK--HCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 33 G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~~~--~~~iglIlGTGtNa~Y~e~ 92 (140)
+.++.+.|++.+ + +| +.|.||+-+..++-.+... +..+-+.+|||..++++..
T Consensus 177 ~~~l~~~l~~~~---~-~p---V~v~NDanaaalaE~~~g~~~~~~v~l~~GtGiG~giv~~ 231 (380)
T 2hoe_A 177 QIPLANLLKEKY---G-IE---VWVENDADMGAVGEKWYTKRDDSFAWILTGKGIGAGIIID 231 (380)
T ss_dssp TSCHHHHHHHHH---C-SE---EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSSCEEEEEET
T ss_pred CCChHHHHHHHh---C-CC---EEEechHHHHHHHHHHhCCCCCcEEEEEeCCceEEEEEEC
Confidence 568888888776 3 43 5789999998887654332 7789999999999999965
No 16
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=90.52 E-value=0.64 Score=38.37 Aligned_cols=82 Identities=18% Similarity=0.118 Sum_probs=54.0
Q ss_pred CchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccC-----------------CCCceEEEEecCCCceeEEeecCC
Q psy11528 33 GANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD-----------------HKHCKIEYLLPVPCGYALQQAFDN 95 (140)
Q Consensus 33 G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~-----------------~~~~~iglIlGTGtNa~Y~e~~~~ 95 (140)
+.++.+.|++.+ + +| +.|.||.-+..++-.+. ..+..+.+.+|||.-++.+..= .
T Consensus 97 ~~~l~~~L~~~~---g-~P---V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtGIG~givi~G-~ 168 (366)
T 3mcp_A 97 GVALGPFLEDIF---G-IP---VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTGFGAGVVIDG-E 168 (366)
T ss_dssp CBCHHHHHHHHH---C-SC---EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSSEEEEEEETT-E
T ss_pred CCCHHHHHHHHH---C-CC---EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCcceEEEEECC-E
Confidence 568888888877 4 55 56799998877665432 3467899999999999999752 1
Q ss_pred CCccccCCC---CCCCCcEEEEeccCcccCCCCCCCCCc
Q psy11528 96 IALPIYEGR---SGQADHLVIRKAWVHFQPKQGLEFCPQ 131 (140)
Q Consensus 96 i~~~k~~~~---~~~~~~miINtEwG~Fg~~g~L~~~~T 131 (140)
+ +.+. ..+-++|. | .-|..|+|+.+.+
T Consensus 169 l----~~G~~g~AGEiGH~~-~----~CG~~GclE~~~S 198 (366)
T 3mcp_A 169 L----LRGDNAAGGYVWCLR-N----KKYPEYIVEESVS 198 (366)
T ss_dssp E----CCCTTSCTTCCTTSB-C----SSCTTSBGGGTSS
T ss_pred E----ecCCCCCCceeeccc-C----CCCCCcceeeeec
Confidence 1 2222 23345666 4 3355667775443
No 17
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=88.72 E-value=0.89 Score=37.09 Aligned_cols=54 Identities=19% Similarity=0.132 Sum_probs=42.2
Q ss_pred cCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccC----CCCceEEEEecCCCceeEEee
Q psy11528 32 VGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 32 ~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~----~~~~~iglIlGTGtNa~Y~e~ 92 (140)
.+.++.+.|++.+ + +| +.|.||..+..++-.+. ..+..+-+.+|||..++++..
T Consensus 174 ~~~~l~~~l~~~~---~-~p---v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~ 231 (406)
T 1z6r_A 174 KEMPLGEALEQHT---G-VP---VYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITD 231 (406)
T ss_dssp SSBCHHHHHHHHH---S-SC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEET
T ss_pred cCCCHHHHHHHHH---C-CC---EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCcEEEEEEEC
Confidence 4568888888876 3 55 56799999988776543 456789999999999999965
No 18
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=88.37 E-value=1.1 Score=34.60 Aligned_cols=53 Identities=13% Similarity=0.088 Sum_probs=39.1
Q ss_pred CchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccCCC---CceEEEEecCCCceeEEee
Q psy11528 33 GANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHK---HCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 33 G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~~~---~~~iglIlGTGtNa~Y~e~ 92 (140)
+.++.+.|++.+ + +| +.+.||..+..++-.+... ...+-+++|||..++++..
T Consensus 85 ~~~l~~~l~~~~---~-~p---v~v~NDa~aaa~~e~~~g~~~~~~~v~l~~GtGiG~gii~~ 140 (289)
T 2aa4_A 85 HFPLVKTLEQLT---N-LP---TIAINDAQAAAWAEFQALDGDITDMVFITVSTGVGGGVVSG 140 (289)
T ss_dssp TCCHHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHTSCTTCCCEEEEEESSSEEEEEEET
T ss_pred CCChHHHHHHHH---C-CC---EEEechHHHHHHHHHHhCCCCCceEEEEEeCccEEEEEEEC
Confidence 457777777765 3 44 5679999998887654321 1788999999999999864
No 19
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=87.62 E-value=0.96 Score=37.36 Aligned_cols=53 Identities=13% Similarity=0.067 Sum_probs=41.5
Q ss_pred CchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccC----CCCceEEEEecCCCceeEEee
Q psy11528 33 GANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 33 G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~----~~~~~iglIlGTGtNa~Y~e~ 92 (140)
+.++.+.|++.+ + +| +.|.||..+..++-.+. ..+..+-+.+|||..++++..
T Consensus 197 ~~~l~~~L~~~~---~-~p---V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~giv~~ 253 (429)
T 1z05_A 197 NLALGPEIYKAT---G-LP---VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLD 253 (429)
T ss_dssp SBCHHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEET
T ss_pred CCCHHHHHHHHh---C-CC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCcEEEEEEEC
Confidence 468888888776 3 55 46799999988776543 457889999999999999965
No 20
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=84.94 E-value=1.7 Score=34.56 Aligned_cols=54 Identities=13% Similarity=0.064 Sum_probs=40.9
Q ss_pred cCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccC----CCCceEEEEecCCCceeEEee
Q psy11528 32 VGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 32 ~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~----~~~~~iglIlGTGtNa~Y~e~ 92 (140)
.+.++.+.|++.+ + +| +.|.||.-+..++-.+. ..+..+-+++|||..++++..
T Consensus 119 ~~~~l~~~l~~~~---~-~p---v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtGiG~gii~~ 176 (343)
T 2yhw_A 119 NSVDLRTPLSDTL---H-LP---VWVDNDGNCAALAERKFGQGKGLENFVTLITGTGIGGGIIHQ 176 (343)
T ss_dssp SSEECHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSSEEEEEEET
T ss_pred cCCCHHHHHHHHH---C-CC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCCEEEEEEEC
Confidence 3457778888766 3 55 56799999988876543 346788999999999999864
No 21
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=83.80 E-value=2.3 Score=34.27 Aligned_cols=42 Identities=19% Similarity=0.055 Sum_probs=31.8
Q ss_pred CceEEEEEechHHHHHh---------------ccc----------------CCCCceEEEEecCCCceeEEee
Q psy11528 51 PVNVVAILNDTAGCLVS---------------CAY----------------DHKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 51 ~v~v~aivNDTVatlls---------------~~y----------------~~~~~~iglIlGTGtNa~Y~e~ 92 (140)
++..+.|.||..+..++ -.+ ...+..+-+++|||..++++..
T Consensus 128 ~~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTGiG~gii~~ 200 (373)
T 2q2r_A 128 PPGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTGLGSSLIYY 200 (373)
T ss_dssp CTTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSSEEEEEEEE
T ss_pred CCCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccCCCcCcCCCCCEEEEEeCCceeEEEEec
Confidence 44346789999998888 232 2236788999999999999976
No 22
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=83.56 E-value=2.4 Score=33.13 Aligned_cols=54 Identities=20% Similarity=0.196 Sum_probs=41.2
Q ss_pred cCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhccc----CCCCceEEEEecCCCceeEEee
Q psy11528 32 VGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAY----DHKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 32 ~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y----~~~~~~iglIlGTGtNa~Y~e~ 92 (140)
.+.++.+.|++.+ + +| +.|.||.-+..++-.+ ...+..+-+.+|||..++++..
T Consensus 85 ~~~~l~~~l~~~~---~-~p---V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~giv~~ 142 (297)
T 4htl_A 85 DNFNLKEWLEAET---G-LP---VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSN 142 (297)
T ss_dssp TTEEHHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEET
T ss_pred cCCCHHHHHHHHH---C-cC---EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcceEEEEEEC
Confidence 3567888888766 3 55 5779999887776544 3457789999999999999975
No 23
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=81.78 E-value=3.9 Score=32.06 Aligned_cols=55 Identities=15% Similarity=0.123 Sum_probs=41.5
Q ss_pred CcCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccC----CCCceEEEEecCCCceeEEee
Q psy11528 31 VVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 31 ~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~----~~~~~iglIlGTGtNa~Y~e~ 92 (140)
-.+.++.+.|++.+ + +| +.+.||.-+..++-.+. ..+..+-+.+|||..++++..
T Consensus 85 w~~~~l~~~l~~~~---~-~p---v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtGiG~gii~~ 143 (302)
T 3vov_A 85 VQDFPIRRILEEAT---G-RP---VFLENDANAAALAEHHLGAAQGEESSLYLTVSTGIGGGVVLG 143 (302)
T ss_dssp CTTCCHHHHHHHHH---S-SC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEET
T ss_pred cCCCChHHHHHHhh---C-CC---EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCceeEEEEEC
Confidence 34567888888766 3 55 46799998887766543 456788999999999999975
No 24
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=81.38 E-value=3.1 Score=32.83 Aligned_cols=85 Identities=16% Similarity=0.154 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHhCCCCceEEEEEechHHHHHhccc---CCCCceEEEEecCCCceeEEeecCCCCccccCCC---CCCC
Q psy11528 35 NVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAY---DHKHCKIEYLLPVPCGYALQQAFDNIALPIYEGR---SGQA 108 (140)
Q Consensus 35 dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y---~~~~~~iglIlGTGtNa~Y~e~~~~i~~~k~~~~---~~~~ 108 (140)
++.+.|++.+ + +| +.+.||.-+..++..+ ...+..+.+.+|||.-++.+..=+ .+.+. ..+-
T Consensus 98 ~l~~~l~~~~---~-~p---v~v~NDanaaa~~e~~~~~~~~~~~~~v~~GtGiG~gii~~G~-----l~~G~~g~aGEi 165 (310)
T 3htv_A 98 DLADKLENTL---N-CP---VEFSRDVNLQLSWDVVENRLTQQLVLAAYLGTGMGFAVWMNGA-----PWTGAHGVAGEL 165 (310)
T ss_dssp THHHHHHHHH---T-SC---EEEEEHHHHHHHHHHHHTTCTTSCEEEEEESSSEEEEEEETTE-----EECCSSSCCCC-
T ss_pred cHHHHHHHHh---C-CC---EEEeeHHHHHHHHHHhhcccCCceEEEEEeceeEEEEEEECCE-----EeecCCCCceeC
Confidence 5566666555 3 54 5679999876553221 234567889999999999997521 12222 2344
Q ss_pred CcEEEEe--ccCcccCCCCCCCCCc
Q psy11528 109 DHLVIRK--AWVHFQPKQGLEFCPQ 131 (140)
Q Consensus 109 ~~miINt--EwG~Fg~~g~L~~~~T 131 (140)
++|.++- +....|..|+|+.+.+
T Consensus 166 Gh~~v~~~g~~C~cG~~GclE~~~S 190 (310)
T 3htv_A 166 GHIPLGDMTQHCACGNPGCLETNCS 190 (310)
T ss_dssp --------------------CCSSS
T ss_pred cceEeCCCCCcCCCCCCceehhhhC
Confidence 5677653 2223455667775443
No 25
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=80.19 E-value=4 Score=32.19 Aligned_cols=55 Identities=7% Similarity=0.025 Sum_probs=42.8
Q ss_pred CcCchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhccc----CCCCceEEEEecCCCceeEEee
Q psy11528 31 VVGANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAY----DHKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 31 ~~G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y----~~~~~~iglIlGTGtNa~Y~e~ 92 (140)
-.+.++.+.|++.+ + +| +.+.||.-+..++-.+ ...+..+.+.+|||.-++.+..
T Consensus 84 w~~~~l~~~l~~~~---~-~p---V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtGiG~gii~~ 142 (302)
T 3epq_A 84 WRHYPFLQTVXNEM---X-IP---VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTGIGAGAIVE 142 (302)
T ss_dssp TBTCCHHHHHHHHH---C-SC---EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEET
T ss_pred ccCCChHHHHHHHh---C-CC---EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEEEC
Confidence 45678888888777 3 55 5679999888776554 3457789999999999999975
No 26
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=79.85 E-value=3.5 Score=32.67 Aligned_cols=40 Identities=15% Similarity=0.013 Sum_probs=31.8
Q ss_pred EEEEEechHHHHHhcccC--------------CCCceEEEEecCCCceeEEeec
Q psy11528 54 VVAILNDTAGCLVSCAYD--------------HKHCKIEYLLPVPCGYALQQAF 93 (140)
Q Consensus 54 v~aivNDTVatlls~~y~--------------~~~~~iglIlGTGtNa~Y~e~~ 93 (140)
.+.|.||.-+..++-.+. ..+..+.+.+|||.-++.+..-
T Consensus 105 ~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGiG~giv~~g 158 (332)
T 1sz2_A 105 HLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHV 158 (332)
T ss_dssp EEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSEEEEEEEEE
T ss_pred cEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccceEEEEecC
Confidence 357899999988877653 3356788999999999999873
No 27
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=79.71 E-value=2.7 Score=32.37 Aligned_cols=52 Identities=19% Similarity=0.122 Sum_probs=36.9
Q ss_pred CchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhccc--CCCCceEEEEecCCCceeEEee
Q psy11528 33 GANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAY--DHKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 33 G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y--~~~~~~iglIlGTGtNa~Y~e~ 92 (140)
+.++.+.| +.+ + +| +.|.||..+..++-.+ ...+..+-+.+|||..++.+..
T Consensus 84 ~~~l~~~l-~~~---~-~p---v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtGiG~giv~~ 137 (292)
T 2gup_A 84 GFSWYEAL-SSY---Q-LP---VHLENDANCVGLSELLAHPELENAACVVIGTGIGGAMIIN 137 (292)
T ss_dssp SSBHHHHT-GGG---C-CC---EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSSEEEEEEET
T ss_pred CCCHHHHH-HHc---C-CC---EEEechHHHHHHHHHHhcCCCCeEEEEEECCceEEEEEEC
Confidence 34555555 432 3 44 5679999998877643 3456789999999999999864
No 28
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=75.02 E-value=6.9 Score=29.86 Aligned_cols=53 Identities=21% Similarity=0.191 Sum_probs=39.3
Q ss_pred CchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccC----CCC-ceEEEEecCCCceeEEee
Q psy11528 33 GANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYD----HKH-CKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 33 G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~----~~~-~~iglIlGTGtNa~Y~e~ 92 (140)
+.++.+.|++.+ + +| +.+.||.-+..++-.+. ..+ ..+.+.+|||.-++.+..
T Consensus 103 ~~~l~~~l~~~~---~-~p---V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtGIG~giv~~ 160 (267)
T 1woq_A 103 NTDIDALLTARL---G-RP---VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTGIGSAFIFD 160 (267)
T ss_dssp TCBHHHHHHHHH---T-SC---EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSSEEEEEEET
T ss_pred CCCHHHHHHHHH---C-CC---EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcceEEEEEEC
Confidence 568888888776 3 54 56799999888775542 223 457889999999999865
No 29
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=70.83 E-value=14 Score=28.64 Aligned_cols=35 Identities=11% Similarity=-0.074 Sum_probs=25.9
Q ss_pred EEEEEechHHHHHhcccCCCCceEEEEecCCCceeEE
Q psy11528 54 VVAILNDTAGCLVSCAYDHKHCKIEYLLPVPCGYALQ 90 (140)
Q Consensus 54 v~aivNDTVatlls~~y~~~~~~iglIlGTGtNa~Y~ 90 (140)
.+.|.||..+..++. +. .+..+-+++|||..++.+
T Consensus 104 pv~v~NDa~aaa~ge-~~-~~~~v~v~~GTGigg~~i 138 (305)
T 1zc6_A 104 RLSLATDGYTTLLGA-HG-GQPGIIVALGTGSIGEAL 138 (305)
T ss_dssp EEEEECHHHHHHHHH-TT-TSSEEEEEESSSEEEEEE
T ss_pred eEEEECCHHHHHHhh-cC-CCCeEEEEecCCeEEEEE
Confidence 468899999987775 33 356778999999964444
No 30
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=70.23 E-value=6.4 Score=30.96 Aligned_cols=54 Identities=19% Similarity=0.204 Sum_probs=39.3
Q ss_pred CchHHHHHHHHHHHhCCCCceEEEEEechHHHHHhccc----CCCCceEEEEecCCCceeEEee
Q psy11528 33 GANVVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAY----DHKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 33 G~dv~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y----~~~~~~iglIlGTGtNa~Y~e~ 92 (140)
+.++.+.|++.+. .+ .+.|.||..+..++-.+ ...+..+-+.+|||.-++.+..
T Consensus 106 ~~~l~~~l~~~~~-----~~-pV~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtGiG~gii~~ 163 (321)
T 3r8e_A 106 NVPIVEILRSEFP-----HI-HFKIENDAKCAALGEYYFGENKRMQTFILLALGTGVGSGVMMN 163 (321)
T ss_dssp SCCHHHHHHHHCT-----TS-EEEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSSEEEEEEET
T ss_pred CCCHHHHHHHHcC-----CC-CEEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEEEC
Confidence 4677777765431 33 35789999888776544 3457789999999999999975
No 31
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=63.70 E-value=16 Score=27.97 Aligned_cols=55 Identities=13% Similarity=0.047 Sum_probs=35.3
Q ss_pred cceecCCCcCch-HHHHHHHHHHHhCCCCceEEEEEechHHHHHhcccCCCCceEEEEecCCC
Q psy11528 24 KGFKCEGVVGAN-VVELLQQALVRRSNFPVNVVAILNDTAGCLVSCAYDHKHCKIEYLLPVPC 85 (140)
Q Consensus 24 KgF~~~~~~G~d-v~~lL~~al~r~~~~~v~v~aivNDTVatlls~~y~~~~~~iglIlGTGt 85 (140)
=|+.+++. ..+ -...|.+.|++ +++ .+.+.||..+..++... .+..+-+++|||.
T Consensus 63 igi~~~G~-~~~~~~~~l~~~l~~---~~~-pv~v~ND~~aaa~~e~~--~~~~v~l~~GTG~ 118 (299)
T 2e2o_A 63 VGMGVAGL-DSKFDWENFTPLASL---IAP-KVIIQHDGVIALFAETL--GEPGVVVIAGTGS 118 (299)
T ss_dssp EEEEETTC-CSHHHHHHHHHHHTT---SSS-EEEEEEHHHHHHHHHHT--TSCEEEEEESSSE
T ss_pred EEEEcCCC-CchhHHHHHHHHHHh---CCC-CEEEeCcHHHHHhhccC--CCCeEEEEecCCE
Confidence 35666665 321 11244555554 233 45789999998887654 4567889999994
No 32
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=43.77 E-value=26 Score=28.39 Aligned_cols=18 Identities=6% Similarity=-0.152 Sum_probs=16.1
Q ss_pred ceEEEEecCCCceeEEee
Q psy11528 75 CKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 75 ~~iglIlGTGtNa~Y~e~ 92 (140)
..+.+.+|||..+|.+..
T Consensus 177 ~~v~~~lGtGiG~g~i~~ 194 (381)
T 1saz_A 177 NLVVAHMGGGISIAAHRK 194 (381)
T ss_dssp EEEEEEESSSEEEEEEET
T ss_pred CEEEEEeCCCcEEEEEEC
Confidence 778999999999999965
No 33
>3lm2_A Putative kinase; structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2, transf; HET: MSE; 1.70A {Agrobacterium tumefaciens}
Probab=43.74 E-value=26 Score=26.67 Aligned_cols=36 Identities=19% Similarity=0.044 Sum_probs=28.7
Q ss_pred EEEEechHHHHHhcccCCCCceEEEEecCCCceeEEee
Q psy11528 55 VAILNDTAGCLVSCAYDHKHCKIEYLLPVPCGYALQQA 92 (140)
Q Consensus 55 ~aivNDTVatlls~~y~~~~~~iglIlGTGtNa~Y~e~ 92 (140)
+.+.||.-+.-++-.+. ...+.+.+|||.-++.+..
T Consensus 95 v~v~NDanaaalge~~~--~~~~~l~~GtGiG~gii~~ 130 (226)
T 3lm2_A 95 VRIVNDALMQAIGSYNG--GRMLFLGLGTGLGAAMIVE 130 (226)
T ss_dssp EEEEEHHHHHHHHHCCS--SEEEEEEESSSEEEEEEET
T ss_pred EEEEEHHHHHHHHHhhc--CcEEEEEeCCceEEEEEEC
Confidence 46799998887766554 5788999999999998853
No 34
>1c1y_B Proto-onkogene serine/threonine protein kinase RAF-1; GTP-binding proteins, protein-protein complex, effectors, signaling protein; HET: GTP; 1.90A {Homo sapiens} SCOP: d.15.1.5 PDB: 1gua_B* 1rfa_A 3kud_B* 3kuc_B*
Probab=32.75 E-value=28 Score=22.82 Aligned_cols=26 Identities=23% Similarity=0.338 Sum_probs=21.5
Q ss_pred cCchHHHHHHHHHHHhCCCCceEEEEE
Q psy11528 32 VGANVVELLQQALVRRSNFPVNVVAIL 58 (140)
Q Consensus 32 ~G~dv~~lL~~al~r~~~~~v~v~aiv 58 (140)
-|..+.+-|.+||++|+ +..+.++|-
T Consensus 20 pG~tlrdaL~KaLk~R~-L~pe~C~V~ 45 (77)
T 1c1y_B 20 NGMSLHDCLMKALKVRG-LQPECCAVF 45 (77)
T ss_dssp TTCBHHHHHHHHHHTTT-CCGGGEEEE
T ss_pred CCcCHHHHHHHHHHHcC-CCHHHeEEE
Confidence 48899999999999998 777666654
No 35
>2l05_A Serine/threonine-protein kinase B-RAF; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=32.13 E-value=31 Score=23.53 Aligned_cols=26 Identities=27% Similarity=0.406 Sum_probs=21.8
Q ss_pred cCchHHHHHHHHHHHhCCCCceEEEEE
Q psy11528 32 VGANVVELLQQALVRRSNFPVNVVAIL 58 (140)
Q Consensus 32 ~G~dv~~lL~~al~r~~~~~v~v~aiv 58 (140)
-|+.+.+-|.+||++|+ +..+.++|-
T Consensus 36 pG~tlrdAL~KaLk~R~-L~pe~C~Vy 61 (95)
T 2l05_A 36 CGVTVRDSLKKALMMRG-LIPECCAVY 61 (95)
T ss_dssp TTCBHHHHHHHHHHHHT-CCGGGEEEE
T ss_pred CCcCHHHHHHHHHHHcC-CCHHHcEEE
Confidence 48999999999999998 777666654
No 36
>2c8e_E Exoenzyme C3, mono-ADP-ribosyltransferase C3; C3 exoenzyme, ARTT motif, bacterial toxins, glycosyltransferase; 1.60A {Clostridium botulinum} PDB: 2c8f_E* 1g24_A 1gzf_A* 1uzi_A* 2c89_A 2c8a_A 2a9k_B* 2a78_B* 1gze_A 2c8b_X 2c8c_A* 2c8d_A 2c8h_A* 2c8g_A*
Probab=31.56 E-value=50 Score=24.68 Aligned_cols=28 Identities=4% Similarity=0.067 Sum_probs=21.7
Q ss_pred cCCCCceEEEEecCCCceeEEeecCCCC
Q psy11528 70 YDHKHCKIEYLLPVPCGYALQQAFDNIA 97 (140)
Q Consensus 70 y~~~~~~iglIlGTGtNa~Y~e~~~~i~ 97 (140)
|......+.+.+-.|+.++|+++++..|
T Consensus 143 f~~~~i~~~I~vpkG~~~~yi~~~s~~~ 170 (211)
T 2c8e_E 143 FAGRPIITKFKVAKGSKAGYIDPISAFA 170 (211)
T ss_dssp GTTCSEEEEEEECTTCBCEECGGGCTTT
T ss_pred cCCCCEEEEEEeCCCCeEEEecccCCCC
Confidence 4444566799999999999999887543
No 37
>3ny5_A Serine/threonine-protein kinase B-RAF; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; HET: MSE; 1.99A {Homo sapiens} SCOP: d.15.1.0
Probab=31.02 E-value=30 Score=23.63 Aligned_cols=28 Identities=25% Similarity=0.336 Sum_probs=23.4
Q ss_pred cCchHHHHHHHHHHHhCCCCceEEEEEec
Q psy11528 32 VGANVVELLQQALVRRSNFPVNVVAILND 60 (140)
Q Consensus 32 ~G~dv~~lL~~al~r~~~~~v~v~aivND 60 (140)
-|..+.+-|.+||++|+ +..+.++|--.
T Consensus 32 pG~tlrdaL~KaLk~R~-L~pe~C~Vy~~ 59 (96)
T 3ny5_A 32 CGVTVRDSLKKALMMRG-LIPECCAVYRI 59 (96)
T ss_dssp TTCBHHHHHHHHHHTTT-CCGGGEEEEEC
T ss_pred CCcCHHHHHHHHHHHcC-CChHHeEEEEc
Confidence 48999999999999998 77777776543
No 38
>2bov_B Mono-ADP-ribosyltransferase C3; C3BOT, exoenzyme, RAla, GTPase, ribosylating toxin, GTP-binding, lipoprotein, prenylation; HET: GDP; 2.66A {Clostridium botulinum}
Probab=26.78 E-value=61 Score=25.17 Aligned_cols=28 Identities=4% Similarity=0.067 Sum_probs=21.6
Q ss_pred cCCCCceEEEEecCCCceeEEeecCCCC
Q psy11528 70 YDHKHCKIEYLLPVPCGYALQQAFDNIA 97 (140)
Q Consensus 70 y~~~~~~iglIlGTGtNa~Y~e~~~~i~ 97 (140)
|......+.+.+-.|+.++|+++++..|
T Consensus 183 f~~~~vll~I~vPkGt~g~yi~~~S~~p 210 (251)
T 2bov_B 183 FAGRPIITKFKVAKGSKAGYIDPISAFA 210 (251)
T ss_dssp SSSSSEEEEEEECTTCBCEECGGGSCCS
T ss_pred cCCCCEEEEEEecCCCeEEeccccCCCC
Confidence 4444567789999999999999887544
No 39
>1wxm_A A-RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain (RBD), ubiquitin-like fold, A-RAF kinase, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=26.14 E-value=32 Score=23.00 Aligned_cols=26 Identities=23% Similarity=0.335 Sum_probs=21.2
Q ss_pred cCchHHHHHHHHHHHhCCCCceEEEEE
Q psy11528 32 VGANVVELLQQALVRRSNFPVNVVAIL 58 (140)
Q Consensus 32 ~G~dv~~lL~~al~r~~~~~v~v~aiv 58 (140)
-|+.+.+-|.+||++|+ +..+.++|-
T Consensus 26 pG~tlrdaL~KaLk~R~-L~pe~C~Vy 51 (86)
T 1wxm_A 26 DGMSVYDSLDKALKVRG-LNQDCCVVY 51 (86)
T ss_dssp SSCBSHHHHHHHHHTTT-CCSSSEEEE
T ss_pred CCcCHHHHHHHHHHHcC-CCHHHeEEE
Confidence 48899999999999998 766666654
No 40
>3bw8_A Exoenzyme C3, mono-ADP-ribosyltransferase C3; C3LIM, RHO, ribosylating toxin, ARTT, C3BOT, C3CER, C3STAU, glycosyltransferase, NAD; 1.80A {Clostridium limosum}
Probab=26.05 E-value=71 Score=23.99 Aligned_cols=28 Identities=0% Similarity=0.007 Sum_probs=22.0
Q ss_pred cCCCCceEEEEecCCCceeEEeecCCCC
Q psy11528 70 YDHKHCKIEYLLPVPCGYALQQAFDNIA 97 (140)
Q Consensus 70 y~~~~~~iglIlGTGtNa~Y~e~~~~i~ 97 (140)
|......+.+.+-.|+.++|+.+++..|
T Consensus 155 f~~~~v~~~I~vpkG~~~~~I~~~S~~p 182 (217)
T 3bw8_A 155 FAGRPIITKFKVLDGSKAGYIEPISTFK 182 (217)
T ss_dssp GTTCSEEEEEEECTTCBCEECGGGCSSC
T ss_pred ccCCCEEEEEEecCCCeEEEccccCCCC
Confidence 4345677899999999999999876544
No 41
>3ozb_A Methylthioadenosine phosphorylase; 5'-methylthioinosine,phosphorylase, transferase; HET: HPA; 2.80A {Pseudomonas aeruginosa}
Probab=24.43 E-value=30 Score=27.01 Aligned_cols=17 Identities=6% Similarity=-0.160 Sum_probs=11.5
Q ss_pred cCCCCceEEEEecCCCc
Q psy11528 70 YDHKHCKIEYLLPVPCG 86 (140)
Q Consensus 70 y~~~~~~iglIlGTGtN 86 (140)
|......||+|+|||..
T Consensus 11 ~~~~~p~igiI~GSGl~ 27 (259)
T 3ozb_A 11 YFQGMSVYAIIGGTGLT 27 (259)
T ss_dssp ----CCCEEEEECTTST
T ss_pred cccCCCCEEEEccCCcc
Confidence 44456789999999975
No 42
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=23.61 E-value=44 Score=26.20 Aligned_cols=18 Identities=6% Similarity=-0.143 Sum_probs=13.4
Q ss_pred ccCCCCceEEEEecCCCc
Q psy11528 69 AYDHKHCKIEYLLPVPCG 86 (140)
Q Consensus 69 ~y~~~~~~iglIlGTGtN 86 (140)
+...+...||+|+|||.-
T Consensus 22 ~~~~~~~~igiI~GSGl~ 39 (268)
T 1g2o_A 22 RTGIGEHDVAVVLGSGWL 39 (268)
T ss_dssp HHSCSCCSEEEEECTTCG
T ss_pred hcCCCCCCEEEEcCCchh
Confidence 333446789999999974
No 43
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=22.27 E-value=94 Score=23.02 Aligned_cols=61 Identities=11% Similarity=0.083 Sum_probs=34.1
Q ss_pred CCCcCchHHHHHHHHHHHhCCCCc-eEEEEEechH-----HHHHhcccCCCCceEEE-EecCCCceeEE
Q psy11528 29 EGVVGANVVELLQQALVRRSNFPV-NVVAILNDTA-----GCLVSCAYDHKHCKIEY-LLPVPCGYALQ 90 (140)
Q Consensus 29 ~~~~G~dv~~lL~~al~r~~~~~v-~v~aivNDTV-----atlls~~y~~~~~~igl-IlGTGtNa~Y~ 90 (140)
+|--|-++.+.|.+.|+.+| ..| ++-.--.|++ |..++-+-....+.-|+ |+|||.-++-.
T Consensus 28 sDhaG~~lK~~i~~~L~~~G-~eV~D~G~~~~~~~dYPd~a~~va~~V~~g~~d~GIliCGTGiG~sIa 95 (166)
T 3s5p_A 28 SDHGGRDLRMFLQQRASAHG-YEVMDLGTESDASVDYPDFAKIGCEAVTSGRADCCILVCGTGIGISIA 95 (166)
T ss_dssp ECGGGHHHHHHHHHHHHHTT-CEEEEEEC--------CHHHHHHHHHHHTTSCSEEEEEESSSHHHHHH
T ss_pred ECchHHHHHHHHHHHHHHCC-CEEEEcCCCCCCCCCHHHHHHHHHHHHHcCCCcEEEEEcCCcHHHHHH
Confidence 35568899999999999988 433 2221123322 22333333344555554 99999766543
No 44
>3odg_A Xanthosine phosphorylase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; HET: XAN; 1.64A {Yersinia pseudotuberculosis} PDB: 1yqq_A* 1yqu_A* 1yr3_A*
Probab=22.20 E-value=52 Score=26.17 Aligned_cols=15 Identities=20% Similarity=0.248 Sum_probs=12.3
Q ss_pred CCCceEEEEecCCCc
Q psy11528 72 HKHCKIEYLLPVPCG 86 (140)
Q Consensus 72 ~~~~~iglIlGTGtN 86 (140)
.....||+|+|+|..
T Consensus 31 ~~~p~igiI~GSGl~ 45 (287)
T 3odg_A 31 GFKPQIAFILGSGLG 45 (287)
T ss_dssp TCCCSEEEEECTTTG
T ss_pred CCCCCEEEEecCChh
Confidence 346789999999975
No 45
>1rrb_A RAF-1 RBD, RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain, transferase, riken structural genomics/proteomics initiative; NMR {Rattus norvegicus} SCOP: d.15.1.5
Probab=21.97 E-value=56 Score=22.68 Aligned_cols=26 Identities=23% Similarity=0.338 Sum_probs=21.3
Q ss_pred cCchHHHHHHHHHHHhCCCCceEEEEE
Q psy11528 32 VGANVVELLQQALVRRSNFPVNVVAIL 58 (140)
Q Consensus 32 ~G~dv~~lL~~al~r~~~~~v~v~aiv 58 (140)
-|..+.+-|.+||++|+ +..+.++|-
T Consensus 37 pG~tlrdaL~KaLk~R~-L~pe~C~Vy 62 (107)
T 1rrb_A 37 NGMSLHDCLMKALKVRG-LQPECCAVF 62 (107)
T ss_dssp TTCBHHHHHHHHHHHHT-CCTTTEEEE
T ss_pred CCcCHHHHHHHHHHHcC-CCHHHceeE
Confidence 48999999999999998 666666554
No 46
>1qe5_A Pentosyltransferase; enzyme, purine nucleoside phosphorylase; 2.20A {Cellulomonas SP} SCOP: c.56.2.1 PDB: 1c3x_A
Probab=21.06 E-value=49 Score=25.89 Aligned_cols=16 Identities=13% Similarity=0.144 Sum_probs=12.1
Q ss_pred CCCCceEEEEecCCCc
Q psy11528 71 DHKHCKIEYLLPVPCG 86 (140)
Q Consensus 71 ~~~~~~iglIlGTGtN 86 (140)
..+...||+|+|||.-
T Consensus 26 ~~~~p~igiI~GSGl~ 41 (266)
T 1qe5_A 26 GVEGHDMALVLGSGWG 41 (266)
T ss_dssp CCSCCSEEEECCTTCT
T ss_pred CCCCCCEEEEeCCchh
Confidence 3335679999999974
No 47
>1ojq_A ADP-ribosyltransferase; 1.68A {Staphylococcus aureus} SCOP: d.166.1.1 PDB: 1ojz_A*
Probab=20.61 E-value=1e+02 Score=23.05 Aligned_cols=28 Identities=11% Similarity=0.115 Sum_probs=21.1
Q ss_pred cCCCCceEEEEecCCCceeEEee--cCCCC
Q psy11528 70 YDHKHCKIEYLLPVPCGYALQQA--FDNIA 97 (140)
Q Consensus 70 y~~~~~~iglIlGTGtNa~Y~e~--~~~i~ 97 (140)
|......+.+.+-.|+.++|+.+ ++..+
T Consensus 147 f~~~~i~l~i~ipkG~~~~yI~~~~lS~~~ 176 (212)
T 1ojq_A 147 LAGRPIELKLELPKGTKAAYIDSKELTAYP 176 (212)
T ss_dssp SCCCSEEEEEEECTTCBCEECCSTTTCSST
T ss_pred cCCCCEEEEEEecCCCcceecccccccCCC
Confidence 33344667899999999999998 76544
No 48
>3pg6_A E3 ubiquitin-protein ligase DTX3L; DNA-damage, metal-binding, nucleus, phosphorylation, chromatin regulator, UBL conjugation pathway, zinc-finger; HET: CIT; 1.70A {Homo sapiens}
Probab=20.46 E-value=30 Score=25.69 Aligned_cols=19 Identities=26% Similarity=0.377 Sum_probs=16.9
Q ss_pred CCcCchHHHHHHHHHHHhC
Q psy11528 30 GVVGANVVELLQQALVRRS 48 (140)
Q Consensus 30 ~~~G~dv~~lL~~al~r~~ 48 (140)
..+|+.|-.||+.||+|+-
T Consensus 86 n~eGr~VL~LL~~AF~~rL 104 (159)
T 3pg6_A 86 NKEGRKVLKLLYRAFDQKL 104 (159)
T ss_dssp SHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHcCC
Confidence 3689999999999999994
No 49
>1r45_A Exoenzyme C3, mono-ADP-ribosyltransferase C3; binary toxin, C3 exoenzyme; 1.57A {Clostridium phage c-st} SCOP: d.166.1.1 PDB: 1r4b_A
Probab=20.21 E-value=1.1e+02 Score=22.57 Aligned_cols=28 Identities=0% Similarity=0.008 Sum_probs=21.6
Q ss_pred cCCCCceEEEEecCCCceeEEeecCCCC
Q psy11528 70 YDHKHCKIEYLLPVPCGYALQQAFDNIA 97 (140)
Q Consensus 70 y~~~~~~iglIlGTGtNa~Y~e~~~~i~ 97 (140)
|......+.+.+-.|+.++|+.+++..|
T Consensus 142 f~~~~i~~~I~vpkG~~g~~i~~~S~~~ 169 (204)
T 1r45_A 142 FGGRPIVTKFKVTNGSKGGYIDPISYFP 169 (204)
T ss_dssp GTTSSEEEEEEECTTCBCEECGGGCSST
T ss_pred ccCCCeEEEEEeCCCCceEeecccCCCC
Confidence 3344567789999999999999887654
Done!