Your job contains 1 sequence.
>psy11529
MAEVYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTG
IDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGS
GARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKD
IESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINVRMSQ
QVLP
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11529
(244 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0001961 - symbol:Arpc1 "Actin-related protein 2/3 ... 900 3.1e-90 1
ZFIN|ZDB-GENE-040116-1 - symbol:arpc1a "actin related pro... 813 8.3e-83 2
UNIPROTKB|Q5ZJI7 - symbol:ARPC1A "Uncharacterized protein... 808 2.8e-82 2
MGI|MGI:1928896 - symbol:Arpc1a "actin related protein 2/... 806 2.9e-80 1
ZFIN|ZDB-GENE-030131-7414 - symbol:arpc1b "actin related ... 806 2.9e-80 1
RGD|620834 - symbol:Arpc1a "actin related protein 2/3 com... 801 9.7e-80 1
UNIPROTKB|E2QYP4 - symbol:ARPC1A "Uncharacterized protein... 799 1.6e-79 1
UNIPROTKB|F1PT97 - symbol:ARPC1A "Uncharacterized protein... 799 1.6e-79 1
UNIPROTKB|E9PF58 - symbol:ARPC1A "Actin-related protein 2... 799 1.6e-79 1
UNIPROTKB|Q92747 - symbol:ARPC1A "Actin-related protein 2... 799 1.6e-79 1
UNIPROTKB|F1REX9 - symbol:ARPC1A "Uncharacterized protein... 799 1.6e-79 1
UNIPROTKB|Q1JP79 - symbol:ARPC1A "Actin-related protein 2... 798 2.0e-79 1
ZFIN|ZDB-GENE-040625-80 - symbol:zgc:86896 "zgc:86896" sp... 795 4.2e-79 1
UNIPROTKB|Q58CQ2 - symbol:ARPC1B "Actin-related protein 2... 768 3.1e-76 1
UNIPROTKB|O15143 - symbol:ARPC1B "Actin-related protein 2... 768 3.1e-76 1
MGI|MGI:1343142 - symbol:Arpc1b "actin related protein 2/... 768 3.1e-76 1
RGD|2155 - symbol:Arpc1b "actin related protein 2/3 compl... 767 3.9e-76 1
UNIPROTKB|O88656 - symbol:Arpc1b "Actin-related protein 2... 767 3.9e-76 1
UNIPROTKB|E2RMT4 - symbol:ARPC1B "Uncharacterized protein... 763 1.0e-75 1
WB|WBGene00000201 - symbol:arx-3 species:6239 "Caenorhabd... 729 4.1e-72 1
UNIPROTKB|F1RNS7 - symbol:ARPC1B "Uncharacterized protein... 722 2.3e-71 1
UNIPROTKB|F8WCG3 - symbol:ARPC1B "Actin-related protein 2... 701 3.8e-69 1
UNIPROTKB|F1PWL8 - symbol:F1PWL8 "Uncharacterized protein... 694 2.1e-68 1
UNIPROTKB|B4DLQ7 - symbol:ARPC1A "cDNA FLJ57124, highly s... 670 7.4e-66 1
UNIPROTKB|D4A992 - symbol:D4A992 "Uncharacterized protein... 651 7.6e-64 1
UNIPROTKB|H9KZ89 - symbol:ARPC1B "Uncharacterized protein... 645 3.3e-63 1
ASPGD|ASPL0000031126 - symbol:AN5778 species:162425 "Emer... 635 3.8e-62 1
POMBASE|SPBC14C8.06 - symbol:arc1 "ARP2/3 actin-organizin... 627 2.7e-61 1
UNIPROTKB|G4MYZ4 - symbol:MGG_04352 "Uncharacterized prot... 601 1.5e-58 1
DICTYBASE|DDB_G0277825 - symbol:arcA "actin related prote... 597 4.0e-58 1
CGD|CAL0002151 - symbol:ARC40 species:5476 "Candida albic... 591 1.7e-57 1
UNIPROTKB|Q59V79 - symbol:ARC40 "Putative uncharacterized... 591 1.7e-57 1
TAIR|locus:2052871 - symbol:ARPC1A "AT2G30910" species:37... 545 1.3e-52 1
TAIR|locus:2042491 - symbol:ARPC1B "AT2G31300" species:37... 545 1.3e-52 1
SGD|S000000438 - symbol:ARC40 "Subunit of the ARP2/3 comp... 487 1.8e-46 1
UNIPROTKB|C9J6C8 - symbol:ARPC1B "Actin-related protein 2... 470 1.2e-44 1
UNIPROTKB|C9JFG9 - symbol:ARPC1B "Actin-related protein 2... 470 1.2e-44 1
UNIPROTKB|C9JQM8 - symbol:ARPC1B "Actin-related protein 2... 470 1.2e-44 1
UNIPROTKB|C9JEY1 - symbol:ARPC1B "Actin-related protein 2... 444 6.6e-42 1
UNIPROTKB|C9J4Z7 - symbol:ARPC1B "Actin-related protein 2... 432 1.2e-40 1
UNIPROTKB|C9K057 - symbol:ARPC1B "Actin-related protein 2... 345 2.0e-31 1
UNIPROTKB|C9JBJ7 - symbol:ARPC1B "Actin-related protein 2... 322 5.6e-29 1
UNIPROTKB|C9JTT6 - symbol:ARPC1B "Actin-related protein 2... 252 1.5e-21 1
UNIPROTKB|B3RNR8 - symbol:TRIADDRAFT_20668 "Probable cyto... 178 4.3e-13 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 175 3.8e-12 1
POMBASE|SPAC806.02c - symbol:SPAC806.02c "Par A family AT... 176 9.1e-12 1
UNIPROTKB|F1SU35 - symbol:CIAO1 "Uncharacterized protein"... 171 2.1e-11 1
UNIPROTKB|O76071 - symbol:CIAO1 "Probable cytosolic iron-... 171 2.2e-11 1
UNIPROTKB|B5X9P2 - symbol:ciao1a "Probable cytosolic iron... 168 5.7e-11 1
ZFIN|ZDB-GENE-040426-839 - symbol:ciao1 "cytosolic iron-s... 166 1.1e-10 1
MGI|MGI:1346998 - symbol:Ciao1 "cytosolic iron-sulfur pro... 166 1.2e-10 1
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 164 2.3e-10 1
UNIPROTKB|B5X212 - symbol:ciao1b "Probable cytosolic iron... 162 4.1e-10 1
ASPGD|ASPL0000060163 - symbol:AN1385 species:162425 "Emer... 149 8.5e-10 2
DICTYBASE|DDB_G0269728 - symbol:ciao1 "putative cytosolic... 142 2.8e-08 2
UNIPROTKB|Q28DW0 - symbol:ciao1 "Probable cytosolic iron-... 144 8.0e-08 1
UNIPROTKB|B4LJT7 - symbol:Ciao1 "Probable cytosolic iron-... 143 1.1e-07 1
UNIPROTKB|B3NQR5 - symbol:Ciao1 "Probable cytosolic iron-... 142 1.4e-07 1
UNIPROTKB|B7QKS1 - symbol:ISCW023049 "Probable cytosolic ... 141 1.6e-07 1
UNIPROTKB|B4KTK4 - symbol:Ciao1 "Probable cytosolic iron-... 141 1.8e-07 1
UNIPROTKB|B4P7Q3 - symbol:Ciao1 "Probable cytosolic iron-... 141 1.9e-07 1
SGD|S000002675 - symbol:CIA1 "Component of cytosolic iron... 140 2.4e-07 1
UNIPROTKB|B4JW81 - symbol:Ciao1 "Probable cytosolic iron-... 138 4.2e-07 1
UNIPROTKB|Q17GR9 - symbol:Ciao1 "Probable cytosolic iron-... 138 4.4e-07 1
UNIPROTKB|B3MC74 - symbol:Ciao1 "Probable cytosolic iron-... 137 5.8e-07 1
UNIPROTKB|B4MY77 - symbol:Ciao1 "Probable cytosolic iron-... 136 7.6e-07 1
UNIPROTKB|B4HRQ6 - symbol:Ciao1 "Probable cytosolic iron-... 135 1.0e-06 1
UNIPROTKB|A7RWD2 - symbol:v1g226592 "Probable cytosolic i... 133 1.1e-06 2
UNIPROTKB|B4QFZ8 - symbol:Ciao1 "Probable cytosolic iron-... 133 1.7e-06 1
FB|FBgn0033972 - symbol:Ciao1 "Ciao1" species:7227 "Droso... 131 3.0e-06 1
UNIPROTKB|B4GDM7 - symbol:Ciao1 "Probable cytosolic iron-... 130 3.9e-06 1
UNIPROTKB|Q292E8 - symbol:Ciao1 "Probable cytosolic iron-... 130 3.9e-06 1
UNIPROTKB|Q7PS24 - symbol:Ciao1 "Probable cytosolic iron-... 126 7.8e-06 2
UNIPROTKB|Q5DFU0 - symbol:Q5DFU0 "Probable cytosolic iron... 127 9.8e-06 1
TAIR|locus:2057381 - symbol:emb1345 "AT2G26060" species:3... 124 2.2e-05 1
UNIPROTKB|Q3ZCC9 - symbol:SEC13 "Protein SEC13 homolog" s... 123 2.4e-05 1
TAIR|locus:2123752 - symbol:AT4G32990 "AT4G32990" species... 123 2.5e-05 1
UNIPROTKB|A4R7U3 - symbol:CIA1 "Probable cytosolic iron-s... 125 2.6e-05 1
MGI|MGI:2442115 - symbol:Wdr59 "WD repeat domain 59" spec... 129 2.7e-05 1
WB|WBGene00012479 - symbol:Y18D10A.9 species:6239 "Caenor... 123 2.7e-05 1
UNIPROTKB|Q9XW12 - symbol:Y18D10A.9 "Probable cytosolic i... 123 2.7e-05 1
DICTYBASE|DDB_G0277257 - symbol:DDB_G0277257 "Nucleoporin... 125 2.8e-05 1
UNIPROTKB|Q6PJI9 - symbol:WDR59 "WD repeat-containing pro... 128 3.4e-05 1
UNIPROTKB|B0XAF3 - symbol:Ciao1 "Probable cytosolic iron-... 122 3.5e-05 1
UNIPROTKB|F1PDM3 - symbol:SEC13 "Uncharacterized protein"... 119 7.1e-05 1
POMBASE|SPBC215.15 - symbol:sec13 "COPII-coated vesicle c... 118 8.0e-05 1
UNIPROTKB|P55735 - symbol:SEC13 "Protein SEC13 homolog" s... 118 9.4e-05 1
MGI|MGI:99832 - symbol:Sec13 "SEC13 homolog (S. cerevisia... 117 0.00012 1
RGD|1359555 - symbol:Sec13 "SEC13 homolog (S. cerevisiae)... 117 0.00012 1
CGD|CAL0000383 - symbol:orf19.4293 species:5476 "Candida ... 118 0.00013 1
UNIPROTKB|Q5AG86 - symbol:CIA1 "Probable cytosolic iron-s... 118 0.00013 1
SGD|S000004198 - symbol:SEC13 "Structural component of 3 ... 115 0.00018 1
FB|FBgn0024509 - symbol:Sec13 "Sec13 ortholog (S. cerevis... 116 0.00022 1
UNIPROTKB|E1BVC4 - symbol:SEC13 "Uncharacterized protein"... 112 0.00046 1
CGD|CAL0000650 - symbol:orf19.2307 species:5476 "Candida ... 114 0.00063 1
UNIPROTKB|Q59WJ4 - symbol:PFS2 "Polyadenylation factor su... 114 0.00063 1
CGD|CAL0004667 - symbol:SEC13 species:5476 "Candida albic... 110 0.00068 1
UNIPROTKB|B3GEK9 - symbol:npp-20 "Nuclear pore complex pr... 106 0.00084 1
DICTYBASE|DDB_G0292052 - symbol:sec13 "putative transport... 109 0.00091 1
>FB|FBgn0001961 [details] [associations]
symbol:Arpc1 "Actin-related protein 2/3 complex, subunit 1"
species:7227 "Drosophila melanogaster" [GO:0007010 "cytoskeleton
organization" evidence=ISS] [GO:0030041 "actin filament
polymerization" evidence=NAS] [GO:0003779 "actin binding"
evidence=IEA;ISS] [GO:0005885 "Arp2/3 protein complex"
evidence=ISS;NAS;TAS] [GO:0005200 "structural constituent of
cytoskeleton" evidence=ISS] [GO:0034314 "Arp2/3 complex-mediated
actin nucleation" evidence=ISS] [GO:0007413 "axonal fasciculation"
evidence=IGI] [GO:0030037 "actin filament reorganization involved
in cell cycle" evidence=IMP] [GO:0007409 "axonogenesis"
evidence=IGI] [GO:0008407 "chaeta morphogenesis" evidence=IMP]
[GO:0001745 "compound eye morphogenesis" evidence=IMP] [GO:0030029
"actin filament-based process" evidence=IMP] [GO:0030589
"pseudocleavage involved in syncytial blastoderm formation"
evidence=IMP] [GO:0022416 "chaeta development" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=IMP]
[GO:0045747 "positive regulation of Notch signaling pathway"
evidence=IMP] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0051491 "positive regulation of filopodium assembly"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006886 GO:GO:0003779 EMBL:AE014134 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0045747 GO:GO:0051491
GO:GO:0007413 GO:GO:0030037 GeneTree:ENSGT00390000008339 KO:K05757
OMA:KKSGNQW GO:GO:0030833 PANTHER:PTHR10709 GO:GO:0005885
GO:GO:0030589 GO:GO:0008407 GO:GO:0001745 EMBL:AY058778
EMBL:AJ133649 RefSeq:NP_476596.1 RefSeq:NP_723845.1
UniGene:Dm.19561 SMR:O97182 MINT:MINT-850983 STRING:O97182
EnsemblMetazoa:FBtr0080569 EnsemblMetazoa:FBtr0080570 GeneID:34793
KEGG:dme:Dmel_CG8978 UCSC:CG8978-RA CTD:34793 FlyBase:FBgn0001961
InParanoid:O97182 OrthoDB:EOG4CC2GP GenomeRNAi:34793 NextBio:790251
Uniprot:O97182
Length = 377
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 162/239 (67%), Positives = 189/239 (79%)
Query: 1 MAEVYSFGIN--PVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKV 58
MAE Y+FG + +T HAWN R Q+A +PNN E+H+Y E +DW DVL+ HDL+V
Sbjct: 1 MAETYTFGTSLASITCHAWNKDRTQIALSPNNHEIHIYSRE--GSDWKLADVLNQHDLRV 58
Query: 59 TGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAA 118
GIDWA NTNRIV+C+ADRNAYVWTQ DD KWKP LVLLRINRAATCVKWSP ENKFA
Sbjct: 59 MGIDWAKNTNRIVSCAADRNAYVWTQG-DDGKWKPALVLLRINRAATCVKWSPAENKFAV 117
Query: 119 GSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYI 178
GSGARLISVCYFESENDWWV+KHIKKPI+ST+T LDWHPNN LL GSTD+KVRVFSA+I
Sbjct: 118 GSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHPNNVLLLAGSTDYKVRVFSAFI 177
Query: 179 KDIESAPQSTNWGSKSTLGNCLVELNNS-SSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
KDIE P T WG++ LG + E NS +SGGGWI+SV+FS DGNK+CW HD +++
Sbjct: 178 KDIEEPPTPTPWGNRKPLGQLMAEFRNSQTSGGGWINSVSFSSDGNKVCWVGHDSCVSI 236
>ZFIN|ZDB-GENE-040116-1 [details] [associations]
symbol:arpc1a "actin related protein 2/3 complex,
subunit 1A" species:7955 "Danio rerio" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-040116-1 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005856 eggNOG:COG2319 CTD:10552 GeneTree:ENSGT00390000008339
HOGENOM:HOG000181752 HOVERGEN:HBG050560 KO:K05757 OMA:KKSGNQW
OrthoDB:EOG4NZTTG GO:GO:0030833 PANTHER:PTHR10709 EMBL:BX649559
EMBL:BC048036 EMBL:BC167955 EMBL:AY398313 IPI:IPI00490517
RefSeq:NP_958500.1 UniGene:Dr.3270 SMR:Q7ZUQ0 STRING:Q7ZUQ0
Ensembl:ENSDART00000014729 GeneID:394243 KEGG:dre:394243
InParanoid:Q7ZUQ0 NextBio:20815152 Uniprot:Q7ZUQ0
Length = 370
Score = 813 (291.2 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 145/233 (62%), Positives = 174/233 (74%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
++ F + P+T HAWN R Q+A +PNN EVH+Y+ K+ N W ++ L H+ +TGIDW
Sbjct: 3 LHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYK--KSGNQWVKVHELKEHNGHITGIDW 60
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP ++RIVTC ADRNAYVW+Q D WKPTLV+LRINRAAT VKWSPLENKFA GSGAR
Sbjct: 61 APKSDRIVTCGADRNAYVWSQK--DGVWKPTLVILRINRAATFVKWSPLENKFAVGSGAR 118
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LISVCYFESENDWWV+KHIKKPI+ST+ LDWHPNN LL GS DFK RVFSAYIK+++
Sbjct: 119 LISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDE 178
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
P T WGSK G + E + SGG W+HSV FS GN+L W SHD ++ V
Sbjct: 179 KPAPTPWGSKMPFGQVMTEFGGAGSGG-WVHSVCFSASGNRLAWVSHDSTVTV 230
Score = 36 (17.7 bits), Expect = 8.3e-83, Sum P(2) = 8.3e-83
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 220 KDGNKLCWTSHDGSINV 236
+D K C T DG++ +
Sbjct: 338 RDCRKFCTTGIDGAMTI 354
>UNIPROTKB|Q5ZJI7 [details] [associations]
symbol:ARPC1A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833 "regulation of
actin filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
eggNOG:COG2319 CTD:10552 GeneTree:ENSGT00390000008339
HOGENOM:HOG000181752 HOVERGEN:HBG050560 KO:K05757 OMA:KKSGNQW
OrthoDB:EOG4NZTTG GO:GO:0030833 PANTHER:PTHR10709 EMBL:AADN02023774
EMBL:AJ720447 IPI:IPI00574693 RefSeq:NP_001072963.1
UniGene:Gga.3197 SMR:Q5ZJI7 STRING:Q5ZJI7
Ensembl:ENSGALT00000007463 Ensembl:ENSGALT00000040792 GeneID:770269
KEGG:gga:770269 InParanoid:Q5ZJI7 NextBio:20920490 Uniprot:Q5ZJI7
Length = 370
Score = 808 (289.5 bits), Expect = 2.8e-82, Sum P(2) = 2.8e-82
Identities = 145/233 (62%), Positives = 175/233 (75%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
++ F + P+T HAWN R Q+A +PNN EVH+Y+ K + W + L H+ +TGIDW
Sbjct: 3 LHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYK--KNGSQWVKAHELKEHNGHITGIDW 60
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP ++RIVTC ADRNAYVW+Q D WKPTLV+LRINRAAT VKWSPLENKFA GSGAR
Sbjct: 61 APKSDRIVTCGADRNAYVWSQK--DGVWKPTLVILRINRAATFVKWSPLENKFAVGSGAR 118
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LISVCYFESENDWWV+KHIKKPI+ST+ LDWHPNN LL GS DFK RVFSAYIK+++
Sbjct: 119 LISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDE 178
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
P ST WGSK G + E + SGG W+HSV+FS GN+L W SHD +++V
Sbjct: 179 KPASTPWGSKMPFGQLMSEFGGAGSGG-WVHSVSFSASGNRLAWVSHDSTVSV 230
Score = 36 (17.7 bits), Expect = 2.8e-82, Sum P(2) = 2.8e-82
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 220 KDGNKLCWTSHDGSINV 236
+D K C T DG++ +
Sbjct: 338 RDCRKFCTTGIDGAMTI 354
>MGI|MGI:1928896 [details] [associations]
symbol:Arpc1a "actin related protein 2/3 complex, subunit
1A" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003779 "actin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005885 "Arp2/3 protein complex" evidence=TAS] [GO:0008150
"biological_process" evidence=ND] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1928896 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 CTD:10552
GeneTree:ENSGT00390000008339 HOGENOM:HOG000181752
HOVERGEN:HBG050560 KO:K05757 OMA:KKSGNQW OrthoDB:EOG4NZTTG
GO:GO:0030833 PANTHER:PTHR10709 ChiTaRS:ARPC1A EMBL:AB024984
EMBL:AK076107 EMBL:AK145663 EMBL:BC001988 IPI:IPI00127987
RefSeq:NP_062741.1 UniGene:Mm.371610 ProteinModelPortal:Q9R0Q6
SMR:Q9R0Q6 IntAct:Q9R0Q6 STRING:Q9R0Q6 PhosphoSite:Q9R0Q6
PaxDb:Q9R0Q6 PRIDE:Q9R0Q6 Ensembl:ENSMUST00000031625 GeneID:56443
KEGG:mmu:56443 UCSC:uc009ama.1 InParanoid:Q9R0Q6 NextBio:312642
Bgee:Q9R0Q6 CleanEx:MM_ARPC1A Genevestigator:Q9R0Q6
GermOnline:ENSMUSG00000029621 GO:GO:0005885 Uniprot:Q9R0Q6
Length = 370
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 144/233 (61%), Positives = 175/233 (75%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
++ F + P+T HAWN R Q+A +PNN EVH+Y+ K + W++ L H+ +TGIDW
Sbjct: 3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYK--KNGSQWTKAHELKEHNGHITGIDW 60
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP ++RIVTC ADRNAYVW+Q D WKPTLV+LRINRAAT VKWSPLENKFA GSGAR
Sbjct: 61 APKSDRIVTCGADRNAYVWSQK--DGIWKPTLVILRINRAATFVKWSPLENKFAVGSGAR 118
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LISVCYFESENDWWV+KHIKKPI+ST+ LDWHPNN LL GS DFK RVFSAYIK+++
Sbjct: 119 LISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDE 178
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
P ST WGSK G + E S +GG W+H V+FS GN+L W SHD +++V
Sbjct: 179 KPASTPWGSKMPFGQLMSEFGGSGTGG-WVHGVSFSASGNRLAWVSHDSTVSV 230
>ZFIN|ZDB-GENE-030131-7414 [details] [associations]
symbol:arpc1b "actin related protein 2/3 complex,
subunit 1B" species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-7414
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856 eggNOG:COG2319
GeneTree:ENSGT00390000008339 HOGENOM:HOG000181752
HOVERGEN:HBG050560 KO:K05757 OrthoDB:EOG4NZTTG GO:GO:0030833
PANTHER:PTHR10709 CTD:10095 OMA:VLFTYDS EMBL:BX649536 EMBL:BX649559
EMBL:BC053229 IPI:IPI00506469 RefSeq:NP_998321.1 UniGene:Dr.76686
SMR:Q7T372 STRING:Q7T372 Ensembl:ENSDART00000033713 GeneID:335474
KEGG:dre:335474 InParanoid:Q7T372 NextBio:20810868 Uniprot:Q7T372
Length = 369
Score = 806 (288.8 bits), Expect = 2.9e-80, P = 2.9e-80
Identities = 143/232 (61%), Positives = 170/232 (73%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y KA N+W+++ VL H+ +VTGIDWA
Sbjct: 4 HSFLLEPISCHAWNKDRTQIALCPNNHEVHIYN--KAGNNWNKIHVLKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P +NRIVTC DRNAYVWT D WKPTLV+LRINRAA CVKWSP ENKFA GSG+RL
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKGD--AWKPTLVILRINRAARCVKWSPKENKFAVGSGSRL 119
Query: 125 ISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESA 184
ISVCYFE +NDWWV KHIKKPI+STI CLDWHPNN LL GS DFK R+FSAYIK++E
Sbjct: 120 ISVCYFEQDNDWWVCKHIKKPIRSTILCLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEEK 179
Query: 185 PQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
P T WGSK G + E +S GW+H V FS GN++ W SHD ++ V
Sbjct: 180 PAPTAWGSKMPFGEVMFESTGTS---GWVHGVCFSDSGNRVAWASHDSTVAV 228
>RGD|620834 [details] [associations]
symbol:Arpc1a "actin related protein 2/3 complex, subunit 1A"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003779 "actin binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:620834 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005856 CTD:10552
HOVERGEN:HBG050560 KO:K05757 GO:GO:0030833 PANTHER:PTHR10709
EMBL:AF315378 IPI:IPI00200845 RefSeq:NP_112408.1 UniGene:Rn.844
ProteinModelPortal:Q99PD4 SMR:Q99PD4 IntAct:Q99PD4 PRIDE:Q99PD4
GeneID:81824 KEGG:rno:81824 NextBio:615755 Genevestigator:Q99PD4
Uniprot:Q99PD4
Length = 370
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 143/233 (61%), Positives = 175/233 (75%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
++ F + P+T HAWN R Q+A +PNN EVH+Y+ K + W++ L H+ +TGIDW
Sbjct: 3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYK--KNGSQWTKAHELKEHNGHITGIDW 60
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP ++RIVTC ADRNAYVW+Q D WKPTLV+LRINRAAT VKWSPLENKFA GSGAR
Sbjct: 61 APKSDRIVTCGADRNAYVWSQK--DGIWKPTLVILRINRAATFVKWSPLENKFAVGSGAR 118
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LISVCYFESENDWWV+KHIKKPI+ST+ LDWHPNN LL GS DFK RVFSAYIK+++
Sbjct: 119 LISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDE 178
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
P ST WGSK G + E S +GG W+H V+FS G++L W SHD +++V
Sbjct: 179 KPASTPWGSKMPFGQLMSEFGGSGTGG-WVHGVSFSASGSRLAWVSHDSTVSV 230
>UNIPROTKB|E2QYP4 [details] [associations]
symbol:ARPC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005856 GeneTree:ENSGT00390000008339 GO:GO:0030833
PANTHER:PTHR10709 EMBL:AAEX03004277 ProteinModelPortal:E2QYP4
PRIDE:E2QYP4 Ensembl:ENSCAFT00000036371 NextBio:20854878
Uniprot:E2QYP4
Length = 366
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 143/233 (61%), Positives = 174/233 (74%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
++ F + P+T HAWN R Q+A +PNN EVH+Y+ K + W + L H+ +TGIDW
Sbjct: 3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYK--KNGSQWVKAHELKEHNGHITGIDW 60
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP ++RIVTC ADRNAYVW+Q D WKPTLV+LRINRAAT VKWSPLENKFA GSGAR
Sbjct: 61 APKSDRIVTCGADRNAYVWSQK--DGVWKPTLVILRINRAATFVKWSPLENKFAVGSGAR 118
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LISVCYFESENDWWV+KHIKKPI+ST+ LDWHPNN LL GS DFK RVFSAYIK+++
Sbjct: 119 LISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDE 178
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
P ST WGSK G + E S +GG W+H V+FS G++L W SHD +++V
Sbjct: 179 KPASTPWGSKMPFGQLMSEFGGSGTGG-WVHGVSFSASGSRLAWVSHDSTVSV 230
>UNIPROTKB|F1PT97 [details] [associations]
symbol:ARPC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005856 GeneTree:ENSGT00390000008339 OMA:KKSGNQW
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AAEX03004277
Ensembl:ENSCAFT00000023968 Uniprot:F1PT97
Length = 401
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 143/233 (61%), Positives = 174/233 (74%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
++ F + P+T HAWN R Q+A +PNN EVH+Y+ K + W + L H+ +TGIDW
Sbjct: 34 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYK--KNGSQWVKAHELKEHNGHITGIDW 91
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP ++RIVTC ADRNAYVW+Q D WKPTLV+LRINRAAT VKWSPLENKFA GSGAR
Sbjct: 92 APKSDRIVTCGADRNAYVWSQK--DGVWKPTLVILRINRAATFVKWSPLENKFAVGSGAR 149
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LISVCYFESENDWWV+KHIKKPI+ST+ LDWHPNN LL GS DFK RVFSAYIK+++
Sbjct: 150 LISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDE 209
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
P ST WGSK G + E S +GG W+H V+FS G++L W SHD +++V
Sbjct: 210 KPASTPWGSKMPFGQLMSEFGGSGTGG-WVHGVSFSASGSRLAWVSHDSTVSV 261
>UNIPROTKB|E9PF58 [details] [associations]
symbol:ARPC1A "Actin-related protein 2/3 complex subunit
1A" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 HGNC:HGNC:703 ChiTaRS:ARPC1A
EMBL:AC004922 EMBL:AC004834 IPI:IPI00926706
ProteinModelPortal:E9PF58 SMR:E9PF58 Ensembl:ENST00000432786
ArrayExpress:E9PF58 Bgee:E9PF58 Uniprot:E9PF58
Length = 279
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 143/233 (61%), Positives = 174/233 (74%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
++ F + P+T HAWN R Q+A +PNN EVH+Y+ K + W + L H+ +TGIDW
Sbjct: 3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYK--KNGSQWVKAHELKEHNGHITGIDW 60
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP ++RIVTC ADRNAYVW+Q D WKPTLV+LRINRAAT VKWSPLENKFA GSGAR
Sbjct: 61 APKSDRIVTCGADRNAYVWSQK--DGVWKPTLVILRINRAATFVKWSPLENKFAVGSGAR 118
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LISVCYFESENDWWV+KHIKKPI+ST+ LDWHPNN LL GS DFK RVFSAYIK+++
Sbjct: 119 LISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDE 178
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
P ST WGSK G + E S +GG W+H V+FS G++L W SHD +++V
Sbjct: 179 KPASTPWGSKMPFGQLMSEFGGSGTGG-WVHGVSFSASGSRLAWVSHDSTVSV 230
>UNIPROTKB|Q92747 [details] [associations]
symbol:ARPC1A "Actin-related protein 2/3 complex subunit
1A" species:9606 "Homo sapiens" [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=TAS] [GO:0030036 "actin cytoskeleton
organization" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0030036 GO:GO:0015629 eggNOG:COG2319
EMBL:CH236956 EMBL:CH471091 CTD:10552 HOVERGEN:HBG050560 KO:K05757
OMA:KKSGNQW OrthoDB:EOG4NZTTG GO:GO:0030833 PANTHER:PTHR10709
EMBL:Y08999 EMBL:BC039594 EMBL:BC047889 EMBL:BC054027
IPI:IPI00333068 RefSeq:NP_006400.2 UniGene:Hs.124126
ProteinModelPortal:Q92747 SMR:Q92747 DIP:DIP-33142N IntAct:Q92747
STRING:Q92747 PhosphoSite:Q92747 DMDM:88984001 PaxDb:Q92747
PeptideAtlas:Q92747 PRIDE:Q92747 DNASU:10552
Ensembl:ENST00000262942 GeneID:10552 KEGG:hsa:10552 UCSC:uc003upx.2
GeneCards:GC07P098923 HGNC:HGNC:703 HPA:HPA004334 MIM:604220
neXtProt:NX_Q92747 PharmGKB:PA24997 InParanoid:Q92747
PhylomeDB:Q92747 ChiTaRS:ARPC1A GenomeRNAi:10552 NextBio:40025
ArrayExpress:Q92747 Bgee:Q92747 CleanEx:HS_ARPC1A
Genevestigator:Q92747 GermOnline:ENSG00000013455 Uniprot:Q92747
Length = 370
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 143/233 (61%), Positives = 174/233 (74%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
++ F + P+T HAWN R Q+A +PNN EVH+Y+ K + W + L H+ +TGIDW
Sbjct: 3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYK--KNGSQWVKAHELKEHNGHITGIDW 60
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP ++RIVTC ADRNAYVW+Q D WKPTLV+LRINRAAT VKWSPLENKFA GSGAR
Sbjct: 61 APKSDRIVTCGADRNAYVWSQK--DGVWKPTLVILRINRAATFVKWSPLENKFAVGSGAR 118
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LISVCYFESENDWWV+KHIKKPI+ST+ LDWHPNN LL GS DFK RVFSAYIK+++
Sbjct: 119 LISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDE 178
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
P ST WGSK G + E S +GG W+H V+FS G++L W SHD +++V
Sbjct: 179 KPASTPWGSKMPFGQLMSEFGGSGTGG-WVHGVSFSASGSRLAWVSHDSTVSV 230
>UNIPROTKB|F1REX9 [details] [associations]
symbol:ARPC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030833 "regulation of actin filament polymerization"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GeneTree:ENSGT00390000008339 OMA:KKSGNQW GO:GO:0030833
PANTHER:PTHR10709 EMBL:FP103031 Ensembl:ENSSSCT00000008349
Uniprot:F1REX9
Length = 370
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 143/233 (61%), Positives = 174/233 (74%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
++ F + P+T HAWN R Q+A +PNN EVH+Y+ K + W + L H+ +TGIDW
Sbjct: 3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYK--KNGSQWVKAHELKEHNGHITGIDW 60
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP ++RIVTC ADRNAYVW+Q D WKPTLV+LRINRAAT VKWSPLENKFA GSGAR
Sbjct: 61 APKSDRIVTCGADRNAYVWSQK--DGVWKPTLVILRINRAATFVKWSPLENKFAVGSGAR 118
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LISVCYFESENDWWV+KHIKKPI+ST+ LDWHPNN LL GS DFK RVFSAYIK+++
Sbjct: 119 LISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDE 178
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
P ST WGSK G + E S +GG W+H V+FS G++L W SHD +++V
Sbjct: 179 KPASTPWGSKMPFGQLMSEFGGSGTGG-WVHGVSFSASGSRLAWVSHDSTVSV 230
>UNIPROTKB|Q1JP79 [details] [associations]
symbol:ARPC1A "Actin-related protein 2/3 complex subunit
1A" species:9913 "Bos taurus" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005856 eggNOG:COG2319 EMBL:BT025475
EMBL:BC147946 IPI:IPI00696217 RefSeq:NP_001068827.1 UniGene:Bt.1766
ProteinModelPortal:Q1JP79 SMR:Q1JP79 STRING:Q1JP79 PRIDE:Q1JP79
Ensembl:ENSBTAT00000005555 GeneID:508402 KEGG:bta:508402 CTD:10552
GeneTree:ENSGT00390000008339 HOGENOM:HOG000181752
HOVERGEN:HBG050560 InParanoid:Q1JP79 KO:K05757 OMA:KKSGNQW
OrthoDB:EOG4NZTTG NextBio:20868503 ArrayExpress:Q1JP79
GO:GO:0030833 PANTHER:PTHR10709 Uniprot:Q1JP79
Length = 370
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 143/233 (61%), Positives = 173/233 (74%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
++ F + P+T HAWN R Q+A +PNN EVH+Y+ K W + L H+ +TGIDW
Sbjct: 3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYK--KNGGQWVKAHELKEHNGHITGIDW 60
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP ++RIVTC ADRNAYVW+Q D WKPTLV+LRINRAAT VKWSPLENKFA GSGAR
Sbjct: 61 APKSDRIVTCGADRNAYVWSQK--DGVWKPTLVILRINRAATFVKWSPLENKFAVGSGAR 118
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LISVCYFESENDWWV+KHIKKPI+ST+ LDWHPNN LL GS DFK RVFSAYIK+++
Sbjct: 119 LISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDE 178
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
P ST WGSK G + E S +GG W+H V+FS G++L W SHD +++V
Sbjct: 179 KPASTPWGSKMPFGQLMSEFGGSGTGG-WVHGVSFSASGSRLAWVSHDSTVSV 230
>ZFIN|ZDB-GENE-040625-80 [details] [associations]
symbol:zgc:86896 "zgc:86896" species:7955 "Danio
rerio" [GO:0003779 "actin binding" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040625-80 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005856 HOVERGEN:HBG050560 KO:K05757
GO:GO:0030833 PANTHER:PTHR10709 EMBL:BC071519 IPI:IPI00506039
RefSeq:NP_001002100.1 UniGene:Dr.104783 ProteinModelPortal:Q6IQ91
SMR:Q6IQ91 PRIDE:Q6IQ91 GeneID:415190 KEGG:dre:415190
NextBio:20818860 Bgee:Q6IQ91 Uniprot:Q6IQ91
Length = 357
Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
Identities = 142/238 (59%), Positives = 172/238 (72%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
+YSFG+ P++ HAWN R Q+A +PN+ +VH+YQ +W ++ L H ++TGIDW
Sbjct: 3 LYSFGLEPLSCHAWNKDRTQIAISPNSSDVHIYQMN--GKEWIKIHELTEHSGRITGIDW 60
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP +NRIVTC++DRNAYVWT D WKPTLVL+RINRAATCVKWSPLENKFA GSGA+
Sbjct: 61 APESNRIVTCASDRNAYVWTLK--DGVWKPTLVLVRINRAATCVKWSPLENKFALGSGAK 118
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LIS+CYFE ENDWW++KHIKKPI ST+ LDWHPNN LL GS D R+FSAYIKDIE
Sbjct: 119 LISICYFEKENDWWLSKHIKKPINSTVLSLDWHPNNMLLAAGSADLHCRIFSAYIKDIED 178
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINVRMSQQ 241
P T WGSK G L+E GGW+HSV FS G+ L W SH+ +INV + Q
Sbjct: 179 RPGPTPWGSKMPFGELLLEYKEC---GGWVHSVCFSPSGDSLAWVSHNSAINVADASQ 233
>UNIPROTKB|Q58CQ2 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9913 "Bos taurus" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005856 eggNOG:COG2319
GeneTree:ENSGT00390000008339 HOGENOM:HOG000181752
HOVERGEN:HBG050560 KO:K05757 OrthoDB:EOG4NZTTG GO:GO:0030833
PANTHER:PTHR10709 EMBL:BT021526 EMBL:BT021895 EMBL:BT026160
EMBL:BC102942 IPI:IPI00693939 RefSeq:NP_001014844.1
UniGene:Bt.23192 PDB:1K8K PDB:1TYQ PDB:1U2V PDB:2P9I PDB:2P9K
PDB:2P9L PDB:2P9N PDB:2P9P PDB:2P9S PDB:2P9U PDB:3DXK PDB:3DXM
PDB:3RSE PDBsum:1K8K PDBsum:1TYQ PDBsum:1U2V PDBsum:2P9I
PDBsum:2P9K PDBsum:2P9L PDBsum:2P9N PDBsum:2P9P PDBsum:2P9S
PDBsum:2P9U PDBsum:3DXK PDBsum:3DXM PDBsum:3RSE
ProteinModelPortal:Q58CQ2 SMR:Q58CQ2 DIP:DIP-29791N STRING:Q58CQ2
PRIDE:Q58CQ2 Ensembl:ENSBTAT00000064158 GeneID:326600
KEGG:bta:326600 CTD:10095 InParanoid:Q58CQ2 OMA:VLFTYDS
EvolutionaryTrace:Q58CQ2 NextBio:20809662 ArrayExpress:Q58CQ2
Uniprot:Q58CQ2
Length = 372
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 135/230 (58%), Positives = 168/230 (73%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ N W Q+ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGNKWVQVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P++NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P E KFA GSG+R+
Sbjct: 62 PDSNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRV 119
Query: 125 ISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESA 184
IS+CYFE ENDWWV KHIKKPI+ST+ LDWHPN+ LL GS DFK R+FSAYIK++E
Sbjct: 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEER 179
Query: 185 PQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSI 234
P T WGSK G + E SSS GW+H V FS +G+++ W SHD ++
Sbjct: 180 PAPTPWGSKMPFGELMFE---SSSSCGWVHGVCFSANGSRVAWVSHDSTV 226
>UNIPROTKB|O15143 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0015629
"actin cytoskeleton" evidence=TAS] [GO:0005200 "structural
constituent of cytoskeleton" evidence=TAS] [GO:0005885 "Arp2/3
protein complex" evidence=TAS] [GO:0006928 "cellular component
movement" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GO:GO:0005200 eggNOG:COG2319 GO:GO:0006928 HOGENOM:HOG000181752
HOVERGEN:HBG050560 KO:K05757 GO:GO:0030833 PANTHER:PTHR10709
GO:GO:0005885 CTD:10095 OMA:VLFTYDS EMBL:AF006084 EMBL:AC004922
EMBL:BC002562 EMBL:BC002988 EMBL:BC007555 IPI:IPI00005160
RefSeq:NP_005711.1 UniGene:Hs.489284 ProteinModelPortal:O15143
SMR:O15143 DIP:DIP-41254N IntAct:O15143 MINT:MINT-5003785
STRING:O15143 PhosphoSite:O15143 PaxDb:O15143 PRIDE:O15143
DNASU:10095 Ensembl:ENST00000252725 Ensembl:ENST00000451682
GeneID:10095 KEGG:hsa:10095 UCSC:uc003upz.3 GeneCards:GC07P098971
HGNC:HGNC:704 HPA:HPA004832 MIM:604223 neXtProt:NX_O15143
PharmGKB:PA24998 InParanoid:O15143 PhylomeDB:O15143 ChiTaRS:ARPC1B
GenomeRNAi:10095 NextBio:38181 ArrayExpress:O15143 Bgee:O15143
CleanEx:HS_ARPC1B Genevestigator:O15143 Uniprot:O15143
Length = 372
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 135/230 (58%), Positives = 167/230 (72%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWTKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P ENKFA GSG+R+
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRV 119
Query: 125 ISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESA 184
IS+CYFE ENDWWV KHIKKPI+ST+ LDWHPNN LL GS DFK R+FSAYIK++E
Sbjct: 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEER 179
Query: 185 PQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSI 234
P T WGSK G + E SSS GW+H V FS G+++ W SHD ++
Sbjct: 180 PAPTPWGSKMPFGELMFE---SSSSCGWVHGVCFSASGSRVAWVSHDSTV 226
>MGI|MGI:1343142 [details] [associations]
symbol:Arpc1b "actin related protein 2/3 complex, subunit
1B" species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005885 "Arp2/3 protein complex"
evidence=TAS] [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1343142 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 EMBL:CH466529 eggNOG:COG2319
GeneTree:ENSGT00390000008339 HOGENOM:HOG000181752
HOVERGEN:HBG050560 KO:K05757 OrthoDB:EOG4NZTTG GO:GO:0030833
PANTHER:PTHR10709 GO:GO:0005885 CTD:10095 OMA:VLFTYDS
ChiTaRS:ARPC1B EMBL:AF162768 EMBL:AK002274 EMBL:AK005378
EMBL:AK147731 EMBL:AK148145 EMBL:AK159371 EMBL:AK167978
EMBL:AK168774 EMBL:AK172124 EMBL:BC003441 IPI:IPI00125143
RefSeq:NP_075631.2 UniGene:Mm.30010 ProteinModelPortal:Q9WV32
SMR:Q9WV32 IntAct:Q9WV32 STRING:Q9WV32 PhosphoSite:Q9WV32
PaxDb:Q9WV32 PRIDE:Q9WV32 Ensembl:ENSMUST00000085679 GeneID:11867
KEGG:mmu:11867 NextBio:279879 Bgee:Q9WV32 CleanEx:MM_ARPC1B
Genevestigator:Q9WV32 GermOnline:ENSMUSG00000029622 Uniprot:Q9WV32
Length = 372
Score = 768 (275.4 bits), Expect = 3.1e-76, P = 3.1e-76
Identities = 135/230 (58%), Positives = 167/230 (72%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWNKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P ENKFA GSG+R+
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRV 119
Query: 125 ISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESA 184
IS+CYFE ENDWWV KHIKKPI+ST+ LDWHPNN LL GS DFK R+FSAYIK++E
Sbjct: 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEER 179
Query: 185 PQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSI 234
P T WGSK G + E SSS GW+H V FS G+++ W SHD ++
Sbjct: 180 PAPTPWGSKMPFGELMFE---SSSSCGWVHGVCFSASGSRVAWVSHDSTV 226
>RGD|2155 [details] [associations]
symbol:Arpc1b "actin related protein 2/3 complex, subunit 1B"
species:10116 "Rattus norvegicus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2155 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005856 eggNOG:COG2319 HOGENOM:HOG000181752
HOVERGEN:HBG050560 KO:K05757 OrthoDB:EOG4NZTTG GO:GO:0030833
PANTHER:PTHR10709 CTD:10095 EMBL:AF083269 EMBL:BC062027
IPI:IPI00211512 RefSeq:NP_062162.1 UniGene:Rn.2090
ProteinModelPortal:O88656 SMR:O88656 IntAct:O88656 STRING:O88656
PRIDE:O88656 GeneID:54227 KEGG:rno:54227 InParanoid:O88656
NextBio:610652 ArrayExpress:O88656 Genevestigator:O88656
GermOnline:ENSRNOG00000000991 Uniprot:O88656
Length = 372
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 135/230 (58%), Positives = 167/230 (72%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWNKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P ENKFA GSG+R+
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRV 119
Query: 125 ISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESA 184
IS+CYFE ENDWWV KHIKKPI+ST+ LDWHPNN LL GS DFK R+FSAYIK++E
Sbjct: 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEER 179
Query: 185 PQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSI 234
P T WGSK G + E SSS GW+H V FS G+++ W SHD ++
Sbjct: 180 PAPTPWGSKMPFGELMFE---SSSSCGWVHGVCFSAGGSRVAWVSHDSTV 226
>UNIPROTKB|O88656 [details] [associations]
symbol:Arpc1b "Actin-related protein 2/3 complex subunit
1B" species:10116 "Rattus norvegicus" [GO:0030833 "regulation of
actin filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:2155 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005856 eggNOG:COG2319
HOGENOM:HOG000181752 HOVERGEN:HBG050560 KO:K05757 OrthoDB:EOG4NZTTG
GO:GO:0030833 PANTHER:PTHR10709 CTD:10095 EMBL:AF083269
EMBL:BC062027 IPI:IPI00211512 RefSeq:NP_062162.1 UniGene:Rn.2090
ProteinModelPortal:O88656 SMR:O88656 IntAct:O88656 STRING:O88656
PRIDE:O88656 GeneID:54227 KEGG:rno:54227 InParanoid:O88656
NextBio:610652 ArrayExpress:O88656 Genevestigator:O88656
GermOnline:ENSRNOG00000000991 Uniprot:O88656
Length = 372
Score = 767 (275.1 bits), Expect = 3.9e-76, P = 3.9e-76
Identities = 135/230 (58%), Positives = 167/230 (72%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWNKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P ENKFA GSG+R+
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRV 119
Query: 125 ISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESA 184
IS+CYFE ENDWWV KHIKKPI+ST+ LDWHPNN LL GS DFK R+FSAYIK++E
Sbjct: 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEER 179
Query: 185 PQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSI 234
P T WGSK G + E SSS GW+H V FS G+++ W SHD ++
Sbjct: 180 PAPTPWGSKMPFGELMFE---SSSSCGWVHGVCFSAGGSRVAWVSHDSTV 226
>UNIPROTKB|E2RMT4 [details] [associations]
symbol:ARPC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005856 GeneTree:ENSGT00390000008339 KO:K05757 GO:GO:0030833
PANTHER:PTHR10709 CTD:10095 OMA:VLFTYDS EMBL:AAEX03004276
RefSeq:XP_536872.1 ProteinModelPortal:E2RMT4
Ensembl:ENSCAFT00000023944 GeneID:479744 KEGG:cfa:479744
NextBio:20854877 Uniprot:E2RMT4
Length = 372
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 135/230 (58%), Positives = 166/230 (72%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W ++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWVKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P ENKFA GSG+R+
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPHENKFAVGSGSRV 119
Query: 125 ISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESA 184
IS+CYFE ENDWWV KHIKKPI+ST+ LDWHPNN LL GS DFK R+FSAYIK++E
Sbjct: 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEER 179
Query: 185 PQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSI 234
P T WGSK G + E SSS GW+H V FS G+++ W SHD ++
Sbjct: 180 PAPTPWGSKMPFGELMFE---SSSSCGWVHGVCFSASGSRVAWVSHDSTM 226
>WB|WBGene00000201 [details] [associations]
symbol:arx-3 species:6239 "Caenorhabditis elegans"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0043652 "engulfment of apoptotic cell" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
SMART:SM00320 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
eggNOG:COG2319 GO:GO:0040011 GO:GO:0040018 GO:GO:0000003
GO:GO:0043652 GeneTree:ENSGT00390000008339 HOGENOM:HOG000181752
KO:K05757 OMA:KKSGNQW GO:GO:0030833 PANTHER:PTHR10709 EMBL:AL110501
PIR:T27432 RefSeq:NP_499570.1 ProteinModelPortal:Q9U1R7 SMR:Q9U1R7
STRING:Q9U1R7 PaxDb:Q9U1R7 EnsemblMetazoa:Y79H2A.6 GeneID:3565442
KEGG:cel:CELE_Y79H2A.6 UCSC:Y79H2A.6 CTD:3565442 WormBase:Y79H2A.6
InParanoid:Q9U1R7 NextBio:956507 Uniprot:Q9U1R7
Length = 368
Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
Identities = 128/231 (55%), Positives = 163/231 (70%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
++FGI P+T HAWN R Q+A + ++ ++H++++ DW + L HDL VTG+DW
Sbjct: 10 WNFGIGPITCHAWNKDRTQIAVSASSNDIHIFEWRNG--DWQSIHTLSEHDLPVTGLDWG 67
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
TNRIV+CS D+NA+VWT D WKP LVL+R NRAAT VKWSPLENKFA GSGA+L
Sbjct: 68 TKTNRIVSCSQDKNAFVWTF--DKNVWKPELVLVRFNRAATYVKWSPLENKFAVGSGAKL 125
Query: 125 ISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESA 184
+SVCY+E ENDWWV+K IKKPI+ST+TCLDWH NN LL GS DFK RVFSAY+K+++
Sbjct: 126 VSVCYYEKENDWWVSKQIKKPIRSTVTCLDWHSNNVLLAVGSCDFKCRVFSAYVKEVDEK 185
Query: 185 PQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSIN 235
P WG K G + E S GGW+H VAFS G +L + SHD S++
Sbjct: 186 PSPNPWGQKMPFGQLMSEY----SVGGWVHRVAFSPSGCRLAFVSHDSSVS 232
>UNIPROTKB|F1RNS7 [details] [associations]
symbol:ARPC1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030833 "regulation of actin filament polymerization"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005856 GeneTree:ENSGT00390000008339 GO:GO:0030833
PANTHER:PTHR10709 OMA:VLFTYDS EMBL:FP102617
Ensembl:ENSSSCT00000008365 Uniprot:F1RNS7
Length = 255
Score = 722 (259.2 bits), Expect = 2.3e-71, P = 2.3e-71
Identities = 128/212 (60%), Positives = 155/212 (73%)
Query: 23 QLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVW 82
++A PNN EVH+Y EK+ N W Q+ L H+ +VTGIDWAP +NRIVTC DRNAYVW
Sbjct: 16 EIAICPNNHEVHIY--EKSGNKWVQVHELKEHNGQVTGIDWAPESNRIVTCGTDRNAYVW 73
Query: 83 TQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHI 142
T + WKPTLV+LRINRAA CV+W+P ENKFA GSG+R+IS+CYFE ENDWWV KHI
Sbjct: 74 TLKG--RTWKPTLVILRINRAARCVRWAPQENKFAVGSGSRVISICYFEQENDWWVCKHI 131
Query: 143 KKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNCLVE 202
KKPI+ST+ LDWHPNN LL GS DFK R+FSAYIK++E P T WGSK G + E
Sbjct: 132 KKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFE 191
Query: 203 LNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSI 234
SSS GW+H V FS G+++ W SHD ++
Sbjct: 192 ---SSSSCGWVHGVCFSASGSRVAWVSHDSTV 220
>UNIPROTKB|F8WCG3 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00927418 ProteinModelPortal:F8WCG3 SMR:F8WCG3
Ensembl:ENST00000451694 ArrayExpress:F8WCG3 Bgee:F8WCG3
Uniprot:F8WCG3
Length = 213
Score = 701 (251.8 bits), Expect = 3.8e-69, P = 3.8e-69
Identities = 126/208 (60%), Positives = 152/208 (73%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWTKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P ENKFA GSG+R+
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRV 119
Query: 125 ISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESA 184
IS+CYFE ENDWWV KHIKKPI+ST+ LDWHPNN LL GS DFK R+FSAYIK++E
Sbjct: 120 ISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEER 179
Query: 185 PQSTNWGSKSTLGNCLVELNNSSSGGGW 212
P T WGSK G + E SSS GW
Sbjct: 180 PAPTPWGSKMPFGELMFE---SSSSCGW 204
>UNIPROTKB|F1PWL8 [details] [associations]
symbol:F1PWL8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030833 "regulation of actin filament
polymerization" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005856 GeneTree:ENSGT00390000008339 GO:GO:0030833
PANTHER:PTHR10709 EMBL:AAEX03005215 Ensembl:ENSCAFT00000023838
Uniprot:F1PWL8
Length = 366
Score = 694 (249.4 bits), Expect = 2.1e-68, P = 2.1e-68
Identities = 130/233 (55%), Positives = 163/233 (69%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
++ F + P+T HAWN Q+A +PNN EVH Y+K + W + L H+ +TGIDW
Sbjct: 3 LHQFLLEPITCHAWNREHTQIALSPNNHEVH---YKKNGSQWVKAHELKEHNGHITGIDW 59
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP ++RIVTC ADRNAYVW++ D WKPTLV+LRINRAAT VKWSPLENKFA GSGAR
Sbjct: 60 APKSDRIVTCGADRNAYVWSEK--DGVWKPTLVILRINRAATFVKWSPLENKFAVGSGAR 117
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LISVCYFESENDWWV+KH+K ++ + LDWH NN ++ GS DFK RVFSAYI+ ++
Sbjct: 118 LISVCYFESENDWWVSKHLKCMLEDSFFQLDWHANN-VVAAGSCDFKCRVFSAYIERKDA 176
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
P ST WGS+ LG + E S GG W+H V FS G++L W S D ++ V
Sbjct: 177 KPASTPWGSRMPLGQLMSEFGGSGPGG-WVHGVGFSASGSRL-WVSPDSTVPV 227
>UNIPROTKB|B4DLQ7 [details] [associations]
symbol:ARPC1A "cDNA FLJ57124, highly similar to
Actin-related protein 2/3 complex subunit 1A" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 SMART:SM00320 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005856 HOGENOM:HOG000181752
HOVERGEN:HBG050560 GO:GO:0030833 PANTHER:PTHR10709 HGNC:HGNC:703
ChiTaRS:ARPC1A EMBL:AC004922 EMBL:AC004834 EMBL:AK297111
IPI:IPI00909730 SMR:B4DLQ7 STRING:B4DLQ7 Ensembl:ENST00000432884
Uniprot:B4DLQ7
Length = 345
Score = 670 (240.9 bits), Expect = 7.4e-66, P = 7.4e-66
Identities = 120/176 (68%), Positives = 139/176 (78%)
Query: 61 IDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGS 120
IDWAP ++RIVTC ADRNAYVW+Q D WKPTLV+LRINRAAT VKWSPLENKFA GS
Sbjct: 11 IDWAPKSDRIVTCGADRNAYVWSQK--DGVWKPTLVILRINRAATFVKWSPLENKFAVGS 68
Query: 121 GARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKD 180
GARLISVCYFESENDWWV+KHIKKPI+ST+ LDWHPNN LL GS DFK RVFSAYIK+
Sbjct: 69 GARLISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKE 128
Query: 181 IESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
++ P ST WGSK G + E S +GG W+H V+FS G++L W SHD +++V
Sbjct: 129 VDEKPASTPWGSKMPFGQLMSEFGGSGTGG-WVHGVSFSASGSRLAWVSHDSTVSV 183
>UNIPROTKB|D4A992 [details] [associations]
symbol:D4A992 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833 "regulation of
actin filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GeneTree:ENSGT00390000008339 OrthoDB:EOG4NZTTG GO:GO:0030833
PANTHER:PTHR10709 IPI:IPI00957476 Ensembl:ENSRNOT00000066198
Uniprot:D4A992
Length = 329
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 125/225 (55%), Positives = 151/225 (67%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDW 63
++ F + P+T HAWN R Q+A +PNN EVH+Y+ K + W++ L H+ +TGIDW
Sbjct: 3 LHQFLLEPITCHAWNRDRTQIALSPNNHEVHIYK--KNGSQWTKAHELKEHNGHITGIDW 60
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
AP ++RIVTC ADRNAYVW+Q D WKPTLV+LRINRAAT VKWSPLENKFA GSGAR
Sbjct: 61 APKSDRIVTCGADRNAYVWSQK--DGIWKPTLVILRINRAATFVKWSPLENKFAVGSGAR 118
Query: 124 LISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIES 183
LISVCYFESENDWWV+KHIKKPI+ST+ LDWHPNN LL GS DFK RV +
Sbjct: 119 LISVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVIDGWEPPGAG 178
Query: 184 APQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAF-SKDGNKLCW 227
P S N + + S G GW SV++ S G + W
Sbjct: 179 NPTPVPCKSSIPFSNT-TQKRDGSLGEGWSRSVSYTSLSGERAQW 222
>UNIPROTKB|H9KZ89 [details] [associations]
symbol:ARPC1B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833 "regulation of
actin filament polymerization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GeneTree:ENSGT00390000008339 GO:GO:0030833 PANTHER:PTHR10709
OMA:VLFTYDS EMBL:AADN02001635 Ensembl:ENSGALT00000007478
Uniprot:H9KZ89
Length = 270
Score = 645 (232.1 bits), Expect = 3.3e-63, P = 3.3e-63
Identities = 113/175 (64%), Positives = 131/175 (74%)
Query: 60 GIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAG 119
GIDWAP +NR+VTC DRNAYVWT + WKPTLV+LRINRAA CVKWSP ENKFA G
Sbjct: 1 GIDWAPESNRLVTCGTDRNAYVWTLKGN--VWKPTLVILRINRAARCVKWSPKENKFAVG 58
Query: 120 SGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIK 179
SG+RLIS+CYFE ENDWWV HIKKPI+ST+ LDWHPNN LL GS DFK R+FSAYIK
Sbjct: 59 SGSRLISICYFEQENDWWVCNHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIK 118
Query: 180 DIESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSI 234
++E P T WGSK G + E SSS GW+HS+ FS GN++ W SHD ++
Sbjct: 119 EVEERPSPTPWGSKMPFGELMFE---SSSSCGWVHSICFSASGNRVAWVSHDSTL 170
>ASPGD|ASPL0000031126 [details] [associations]
symbol:AN5778 species:162425 "Emericella nidulans"
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] [GO:0033205 "cell cycle cytokinesis" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005885 "Arp2/3
protein complex" evidence=IEA] [GO:0030479 "actin cortical patch"
evidence=IEA] [GO:0051286 "cell tip" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856 eggNOG:COG2319
EMBL:AACD01000098 EMBL:BN001305 GO:GO:0045010 HOGENOM:HOG000181752
KO:K05757 PANTHER:PTHR10709 OMA:FQTLCGD OrthoDB:EOG42FWS2
RefSeq:XP_663382.1 ProteinModelPortal:Q5B102 STRING:Q5B102
EnsemblFungi:CADANIAT00003275 GeneID:2872066 KEGG:ani:AN5778.2
Uniprot:Q5B102
Length = 363
Score = 635 (228.6 bits), Expect = 3.8e-62, P = 3.8e-62
Identities = 121/226 (53%), Positives = 152/226 (67%)
Query: 11 PVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRI 70
P+ H++++ + LA N V LYQ K + +S D L GH+ VT +D APN+ RI
Sbjct: 13 PIADHSFSSDKSVLAVARENN-VELYQ--KTGSKFSLTDELKGHEKTVTSVDIAPNSGRI 69
Query: 71 VTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYF 130
VTCS DRNAYVW Q WKPTLVLLRINRAAT V+WSP E KFA GSGAR+I+VCYF
Sbjct: 70 VTCSQDRNAYVWEQTPTG--WKPTLVLLRINRAATFVRWSPSEQKFAVGSGARVIAVCYF 127
Query: 131 ESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNW 190
E ENDWW++KH+KKPI+STIT L WHPN+ LL GSTD RVFS++IK +++ P+ + W
Sbjct: 128 EEENDWWISKHLKKPIRSTITTLAWHPNSVLLAAGSTDSHARVFSSFIKGVDTRPEPSAW 187
Query: 191 GSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
G + E N S+G WIH V FS GN L +T HD S+ +
Sbjct: 188 GERLPFNTICGEFLNDSAG--WIHGVCFSPSGNALAFTGHDSSVTI 231
>POMBASE|SPBC14C8.06 [details] [associations]
symbol:arc1 "ARP2/3 actin-organizing complex subunit
Sop2" species:4896 "Schizosaccharomyces pombe" [GO:0000147 "actin
cortical patch assembly" evidence=IC] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005885 "Arp2/3 protein
complex" evidence=IDA] [GO:0006897 "endocytosis" evidence=IC]
[GO:0030479 "actin cortical patch" evidence=IDA] [GO:0032153 "cell
division site" evidence=IDA] [GO:0033205 "cell cycle cytokinesis"
evidence=IMP] [GO:0034314 "Arp2/3 complex-mediated actin
nucleation" evidence=IDA] [GO:0051286 "cell tip" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC14C8.06 GO:GO:0005829
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0032153
GO:GO:0051286 EMBL:CU329671 eggNOG:COG2319 GO:GO:0006897
GenomeReviews:CU329671_GR GO:GO:0030479 GO:GO:0000147 GO:GO:0033205
HOGENOM:HOG000181752 KO:K05757 PANTHER:PTHR10709 GO:GO:0005885
GO:GO:0034314 PDB:3DWL PDBsum:3DWL EMBL:Y08998 EMBL:D89122
PIR:T39434 PIR:T42364 PIR:T45528 RefSeq:NP_595909.1
ProteinModelPortal:P78774 IntAct:P78774 STRING:P78774 PRIDE:P78774
EnsemblFungi:SPBC14C8.06.1 GeneID:2540002 KEGG:spo:SPBC14C8.06
OMA:FQTLCGD OrthoDB:EOG42FWS2 EvolutionaryTrace:P78774
NextBio:20801145 Uniprot:P78774
Length = 377
Score = 627 (225.8 bits), Expect = 2.7e-61, P = 2.7e-61
Identities = 115/226 (50%), Positives = 148/226 (65%)
Query: 11 PVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRI 70
P HA+N+ R + T +V LY E+ N W HD VT +DWAP +NRI
Sbjct: 13 PSYEHAFNSQRTEFVTTTATNQVELY--EQDGNGWKHARTFSDHDKIVTCVDWAPKSNRI 70
Query: 71 VTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYF 130
VTCS DRNAYV+ + D WK TLVLLR+NRAAT V+WSP E+KFA GSGAR+ISVCYF
Sbjct: 71 VTCSQDRNAYVY-EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYF 129
Query: 131 ESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNW 190
E ENDWWV+KH+K+P++STI LDWHPNN LL G D K V SAY++D+++ P+++ W
Sbjct: 130 EQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVW 189
Query: 191 GSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
GS+ E + GGW+H+V FS GN L + HD S+ +
Sbjct: 190 GSRLPFNTVCAEYPS----GGWVHAVGFSPSGNALAYAGHDSSVTI 231
>UNIPROTKB|G4MYZ4 [details] [associations]
symbol:MGG_04352 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0045010 KO:K05757 PANTHER:PTHR10709
GO:GO:0005885 EMBL:CM001232 RefSeq:XP_003713462.1
EnsemblFungi:MGG_04352T0 GeneID:2677781 KEGG:mgr:MGG_04352
Uniprot:G4MYZ4
Length = 363
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 120/235 (51%), Positives = 154/235 (65%)
Query: 3 EVYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGID 62
EV+ NP+ H+++ RQ LA + V LY +A + D L GHD VT +D
Sbjct: 5 EVHHLFHNPIADHSFSADRQTLAIA-RDSTVELYG--RAEKGFRLQDELKGHDKTVTSVD 61
Query: 63 WAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGA 122
AP++ RIVTCS DRNA VW + +KPTLVLLRINRAAT V+WSP E KFA GSG
Sbjct: 62 IAPSSGRIVTCSQDRNALVWEPSPTG--YKPTLVLLRINRAATYVRWSPSETKFAVGSGD 119
Query: 123 RLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIE 182
R+I++CYFE ENDWWV+KH+KKPI+STIT + WHPN+ LL GSTD RV S++IK ++
Sbjct: 120 RVIAICYFEEENDWWVSKHLKKPIRSTITTVAWHPNSVLLAAGSTDAHARVLSSFIKGVD 179
Query: 183 SAPQSTNWGSKSTLGN-CLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
+ P+ T WG + C LNNS+ GW+H+VAFS G L + +HD SI V
Sbjct: 180 TKPEPTGWGERLPFNTVCGEYLNNSA---GWVHAVAFSPSGEALAFAAHDSSITV 231
>DICTYBASE|DDB_G0277825 [details] [associations]
symbol:arcA "actin related protein 2/3 complex,
subunit 1" species:44689 "Dictyostelium discoideum" [GO:0030670
"phagocytic vesicle membrane" evidence=IDA] [GO:0006909
"phagocytosis" evidence=IEP] [GO:0006887 "exocytosis" evidence=IEP]
[GO:0005885 "Arp2/3 protein complex" evidence=IDA] [GO:0030864
"cortical actin cytoskeleton" evidence=IC] [GO:0030175 "filopodium"
evidence=IC] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0051015 "actin filament binding" evidence=TAS] [GO:0045010
"actin nucleation" evidence=TAS] [GO:0030041 "actin filament
polymerization" evidence=TAS] [GO:0006928 "cellular component
movement" evidence=TAS] [GO:0031252 "cell leading edge"
evidence=IC] [GO:0031143 "pseudopodium" evidence=IEA;IC]
[GO:0030833 "regulation of actin filament polymerization"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005938
"cell cortex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005905 "coated pit" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277825 GO:GO:0005829 GO:GO:0031252
GO:GO:0030670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR EMBL:AAFI02000023 eggNOG:COG2319
GO:GO:0006909 GO:GO:0006928 GO:GO:0030175 GO:GO:0031143
GO:GO:0030041 GO:GO:0030864 GO:GO:0006887 GO:GO:0045010 KO:K05757
PANTHER:PTHR10709 GO:GO:0005885 EMBL:AF095930 RefSeq:XP_642137.1
ProteinModelPortal:O96622 STRING:O96622 EnsemblProtists:DDB0214932
GeneID:8621345 KEGG:ddi:DDB_G0277825 OMA:LEPLSCH
ProtClustDB:CLSZ2846836 Uniprot:O96622
Length = 369
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 115/221 (52%), Positives = 146/221 (66%)
Query: 12 VTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIV 71
+T HAWN R ++A PNN EVH+Y K W VL HD VT IDWAP TNRI+
Sbjct: 13 ITAHAWNADRSRVALCPNNNEVHIYA--KQGTSWVVEHVLAEHDQLVTSIDWAPKTNRIL 70
Query: 72 TCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFE 131
T S DRNAYVWT D +WKP LVLLRINRAAT VKWSP ENKFA +GA+L+ +C+FE
Sbjct: 71 TSSQDRNAYVWTFK--DGQWKPVLVLLRINRAATHVKWSPQENKFAVATGAKLVCICFFE 128
Query: 132 SENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWG 191
E+DWW + HIKK KST+ +DWHPNN LL S+D+KVRVF AYIK + + +G
Sbjct: 129 EEHDWWASNHIKKH-KSTVLKVDWHPNNLLLATSSSDYKVRVFDAYIKKADGRSVTRPYG 187
Query: 192 SKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDG 232
+ G + E + +S W+H++ +S G+ L ++SHDG
Sbjct: 188 EVA-FGEPVFEFDQCAS---WVHALKWSPSGSTLAYSSHDG 224
>CGD|CAL0002151 [details] [associations]
symbol:ARC40 species:5476 "Candida albicans" [GO:0030479
"actin cortical patch" evidence=IEA] [GO:0051286 "cell tip"
evidence=IEA] [GO:0005885 "Arp2/3 protein complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0032153 "cell division
site" evidence=IEA] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0034314 "Arp2/3 complex-mediated actin nucleation"
evidence=IEA] [GO:0033205 "cell cycle cytokinesis" evidence=IEA]
[GO:0009267 "cellular response to starvation" evidence=IMP]
[GO:0036170 "filamentous growth of a population of unicellular
organisms in response to starvation" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017383 Pfam:PF00400
PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0002151 GO:GO:0071216 GO:GO:0036180 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0005856 eggNOG:COG2319 GO:GO:0009267
GO:GO:0036170 KO:K05757 GO:GO:0030833 PANTHER:PTHR10709
EMBL:AACQ01000125 RefSeq:XP_713498.1 ProteinModelPortal:Q59V79
STRING:Q59V79 GeneID:3644866 KEGG:cal:CaO19.3873 Uniprot:Q59V79
Length = 384
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 117/233 (50%), Positives = 151/233 (64%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKA-ANDWSQL-DVLDGHDLKVTGI 61
+Y G P+ H ++ R LA T N +V +YQ + + QL VL HD VT +
Sbjct: 7 IYQLGHLPIKDHVFSPDRSILAITKGN-DVEVYQISPSNLSSKPQLIAVLKDHDKTVTSV 65
Query: 62 DWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSG 121
D +P+ ++I+TCS DRNA VW N + +KPTLVLLRINRAAT +WSP +KFA GS
Sbjct: 66 DISPDGSKILTCSQDRNALVWEYANGE--YKPTLVLLRINRAATVCRWSPDGSKFAVGSS 123
Query: 122 ARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDI 181
R+I+VCY+E ENDWWV+KH+KKP+KSTIT +DWHPN LL CGSTD VRVFS YIK I
Sbjct: 124 DRIIAVCYYEEENDWWVSKHLKKPLKSTITTIDWHPNGVLLACGSTDGHVRVFSGYIKGI 183
Query: 182 ESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSI 234
++ P + WG+K + N ++ WIH V FS DGN L + SHD S+
Sbjct: 184 DAKPDPSVWGTKLPFQTLCGDYTNETNA--WIHGVKFSPDGNALAYVSHDSSV 234
>UNIPROTKB|Q59V79 [details] [associations]
symbol:ARC40 "Putative uncharacterized protein ARC40"
species:237561 "Candida albicans SC5314" [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0036170 "filamentous growth of a
population of unicellular organisms in response to starvation"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0002151 GO:GO:0071216
GO:GO:0036180 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
eggNOG:COG2319 GO:GO:0009267 GO:GO:0036170 KO:K05757 GO:GO:0030833
PANTHER:PTHR10709 EMBL:AACQ01000125 RefSeq:XP_713498.1
ProteinModelPortal:Q59V79 STRING:Q59V79 GeneID:3644866
KEGG:cal:CaO19.3873 Uniprot:Q59V79
Length = 384
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 117/233 (50%), Positives = 151/233 (64%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKA-ANDWSQL-DVLDGHDLKVTGI 61
+Y G P+ H ++ R LA T N +V +YQ + + QL VL HD VT +
Sbjct: 7 IYQLGHLPIKDHVFSPDRSILAITKGN-DVEVYQISPSNLSSKPQLIAVLKDHDKTVTSV 65
Query: 62 DWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSG 121
D +P+ ++I+TCS DRNA VW N + +KPTLVLLRINRAAT +WSP +KFA GS
Sbjct: 66 DISPDGSKILTCSQDRNALVWEYANGE--YKPTLVLLRINRAATVCRWSPDGSKFAVGSS 123
Query: 122 ARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDI 181
R+I+VCY+E ENDWWV+KH+KKP+KSTIT +DWHPN LL CGSTD VRVFS YIK I
Sbjct: 124 DRIIAVCYYEEENDWWVSKHLKKPLKSTITTIDWHPNGVLLACGSTDGHVRVFSGYIKGI 183
Query: 182 ESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSI 234
++ P + WG+K + N ++ WIH V FS DGN L + SHD S+
Sbjct: 184 DAKPDPSVWGTKLPFQTLCGDYTNETNA--WIHGVKFSPDGNALAYVSHDSSV 234
>TAIR|locus:2052871 [details] [associations]
symbol:ARPC1A "AT2G30910" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0030833 "regulation of actin filament polymerization"
evidence=IEA] [GO:0007015 "actin filament organization"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005885
"Arp2/3 protein complex" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0007015 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC004669 HOGENOM:HOG000181752
KO:K05757 GO:GO:0030833 PANTHER:PTHR10709 GO:GO:0005885 OMA:FQTLCGD
EMBL:BT004616 EMBL:AK227543 IPI:IPI00516797 PIR:B84714
RefSeq:NP_001189645.1 RefSeq:NP_180648.1 UniGene:At.48535
UniGene:At.71148 ProteinModelPortal:O80856 SMR:O80856 STRING:O80856
PaxDb:O80856 EnsemblPlants:AT2G30910.1 EnsemblPlants:AT2G30910.3
GeneID:817641 KEGG:ath:AT2G30910 TAIR:At2g30910 InParanoid:O80856
PhylomeDB:O80856 ProtClustDB:CLSN2683126 ArrayExpress:O80856
Genevestigator:O80856 Uniprot:O80856
Length = 378
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 103/234 (44%), Positives = 149/234 (63%)
Query: 1 MAEVYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTG 60
+ +V+ F +T HAW+ +A PNN EVH+Y+ + + W +L VL HD V+G
Sbjct: 3 VVDVHRFA-ESITCHAWSPDLSMVALCPNNTEVHIYK-SLSQDHWERLHVLQKHDQIVSG 60
Query: 61 IDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGS 120
IDW+ +N+IVT S DRN+YVW+ + +W PTLV+LR+NRAA CV+WSP ENKFA GS
Sbjct: 61 IDWSSKSNKIVTVSHDRNSYVWSL--EGAEWVPTLVILRLNRAALCVQWSPKENKFAVGS 118
Query: 121 GARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKD 180
GA+ + +CY+E EN+WWV+K I+K +S++T + WHPNN LL STD K RVFS +IK
Sbjct: 119 GAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKG 178
Query: 181 IESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSI 234
+++ +++ G +++L+ S S W V +S GN L + H I
Sbjct: 179 VDTKDSKAGSPAETKFGEQILQLDLSYS---WAFGVKWSPSGNTLAYVGHSSMI 229
>TAIR|locus:2042491 [details] [associations]
symbol:ARPC1B "AT2G31300" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0030833 "regulation of actin filament polymerization"
evidence=IEA] [GO:0007015 "actin filament organization"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005885
"Arp2/3 protein complex" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0007015 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC006593 HOGENOM:HOG000181752
KO:K05757 GO:GO:0030833 PANTHER:PTHR10709 GO:GO:0005885
UniGene:At.48535 UniGene:At.71148 ProtClustDB:CLSN2683126
EMBL:AF439845 EMBL:BT000567 IPI:IPI00517913 PIR:A84719
RefSeq:NP_180688.1 ProteinModelPortal:Q9SJW6 SMR:Q9SJW6
IntAct:Q9SJW6 STRING:Q9SJW6 PRIDE:Q9SJW6 EnsemblPlants:AT2G31300.1
GeneID:817687 KEGG:ath:AT2G31300 TAIR:At2g31300 InParanoid:Q9SJW6
OMA:THENTIT PhylomeDB:Q9SJW6 Genevestigator:Q9SJW6 Uniprot:Q9SJW6
Length = 378
Score = 545 (196.9 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 103/234 (44%), Positives = 149/234 (63%)
Query: 1 MAEVYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTG 60
+ +V+ F +T HAW+ +A PNN EVH+Y+ + + W +L VL HD V+G
Sbjct: 3 VVDVHRFA-ESITCHAWSPDLSMVALCPNNTEVHIYK-SLSQDHWERLHVLQKHDQIVSG 60
Query: 61 IDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGS 120
IDW+ +N+IVT S DRN+YVW+ + +W PTLV+LR+NRAA CV+WSP ENKFA GS
Sbjct: 61 IDWSSKSNKIVTVSHDRNSYVWSL--EGAEWVPTLVILRLNRAALCVQWSPKENKFAVGS 118
Query: 121 GARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKD 180
GA+ + +CY+E EN+WWV+K I+K +S++T + WHPNN LL STD K RVFS +IK
Sbjct: 119 GAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHPNNVLLATTSTDGKCRVFSTFIKG 178
Query: 181 IESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSI 234
+++ +++ G +++L+ S S W V +S GN L + H I
Sbjct: 179 VDTKDSKAGSPAETKFGEQILQLDLSYS---WAFGVKWSPSGNTLAYVGHSSMI 229
>SGD|S000000438 [details] [associations]
symbol:ARC40 "Subunit of the ARP2/3 complex" species:4932
"Saccharomyces cerevisiae" [GO:0003779 "actin binding"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0005885 "Arp2/3 protein complex" evidence=IDA] [GO:0007015
"actin filament organization" evidence=IMP] [GO:0000001
"mitochondrion inheritance" evidence=TAS] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030833 "regulation of actin
filament polymerization" evidence=IEA] [GO:0030479 "actin cortical
patch" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045010 "actin nucleation" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR017383
Pfam:PF00400 PIRSF:PIRSF038093 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000438 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 EMBL:BK006936 GO:GO:0030479
GO:GO:0000001 GO:GO:0045010 GeneTree:ENSGT00390000008339
HOGENOM:HOG000181752 KO:K05757 PANTHER:PTHR10709 GO:GO:0005885
OMA:FQTLCGD OrthoDB:EOG42FWS2 EMBL:Z36103 EMBL:AY692758 PIR:S46110
RefSeq:NP_009793.1 ProteinModelPortal:P38328 SMR:P38328
DIP:DIP-2219N IntAct:P38328 MINT:MINT-382482 STRING:P38328
PaxDb:P38328 PeptideAtlas:P38328 EnsemblFungi:YBR234C GeneID:852536
KEGG:sce:YBR234C CYGD:YBR234c NextBio:971595 Genevestigator:P38328
GermOnline:YBR234C GO:GO:0043130 Uniprot:P38328
Length = 384
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 107/236 (45%), Positives = 139/236 (58%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQL-DVLDGHDLKVTGID 62
VY P+ +H ++ + LA T E Y + N L L HD +T +D
Sbjct: 14 VYKLVKAPIYSHCFSQDKSILAVTC---ETDCLVYRVSNNTPPVLFATLKDHDKTITAVD 70
Query: 63 WAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGA 122
+ + RIVTCS DRNAYVW +D +KPTLVLLRINRAAT V W+P KFA GS A
Sbjct: 71 ISIH-GRIVTCSQDRNAYVWEPLSDGT-YKPTLVLLRINRAATSVTWAPNGYKFAVGSSA 128
Query: 123 RLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIE 182
R+I+VCY+E EN+WWV+KHIKKPIKSTI CL WH N LL G TD +RVFS +IK ++
Sbjct: 129 RIIAVCYYEHENNWWVSKHIKKPIKSTINCLSWHANGVLLAAGGTDGFMRVFSGFIKGLD 188
Query: 183 SAPQ--STNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
S + WG K G CL+ G +IH V + ++ + +HDG++NV
Sbjct: 189 SKESVAGSPWGQKFPFG-CLIR---EWYQGSYIHDVEWRSQMERIAYVAHDGTLNV 240
>UNIPROTKB|C9J6C8 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00925033
ProteinModelPortal:C9J6C8 SMR:C9J6C8 STRING:C9J6C8
Ensembl:ENST00000431816 ArrayExpress:C9J6C8 Bgee:C9J6C8
Uniprot:C9J6C8
Length = 133
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 82/134 (61%), Positives = 102/134 (76%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWTKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P ENKFA GSG+R+
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRV 119
Query: 125 ISVCYFESENDWWV 138
IS+CYFE ENDWWV
Sbjct: 120 ISICYFEQENDWWV 133
>UNIPROTKB|C9JFG9 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00925033 ProteinModelPortal:C9JFG9 SMR:C9JFG9
Ensembl:ENST00000427217 Bgee:C9JFG9 Uniprot:C9JFG9
Length = 133
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 82/134 (61%), Positives = 102/134 (76%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWTKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P ENKFA GSG+R+
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRV 119
Query: 125 ISVCYFESENDWWV 138
IS+CYFE ENDWWV
Sbjct: 120 ISICYFEQENDWWV 133
>UNIPROTKB|C9JQM8 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00925033 ProteinModelPortal:C9JQM8 SMR:C9JQM8
Ensembl:ENST00000458033 Bgee:C9JQM8 Uniprot:C9JQM8
Length = 133
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 82/134 (61%), Positives = 102/134 (76%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWTKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P ENKFA GSG+R+
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRV 119
Query: 125 ISVCYFESENDWWV 138
IS+CYFE ENDWWV
Sbjct: 120 ISICYFEQENDWWV 133
>UNIPROTKB|C9JEY1 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00924615
ProteinModelPortal:C9JEY1 SMR:C9JEY1 STRING:C9JEY1
Ensembl:ENST00000417330 ArrayExpress:C9JEY1 Bgee:C9JEY1
Uniprot:C9JEY1
Length = 130
Score = 444 (161.4 bits), Expect = 6.6e-42, P = 6.6e-42
Identities = 79/131 (60%), Positives = 99/131 (75%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWTKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P ENKFA GSG+R+
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRV 119
Query: 125 ISVCYFESEND 135
IS+CYFE END
Sbjct: 120 ISICYFEQEND 130
>UNIPROTKB|C9J4Z7 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00927612
ProteinModelPortal:C9J4Z7 SMR:C9J4Z7 STRING:C9J4Z7
Ensembl:ENST00000455009 ArrayExpress:C9J4Z7 Bgee:C9J4Z7
Uniprot:C9J4Z7
Length = 128
Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
Identities = 77/129 (59%), Positives = 97/129 (75%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWTKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARL 124
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P ENKFA GSG+R+
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNENKFAVGSGSRV 119
Query: 125 ISVCYFESE 133
IS+CYFE E
Sbjct: 120 ISICYFEQE 128
>UNIPROTKB|C9K057 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
HOGENOM:HOG000181752 GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00927861
ProteinModelPortal:C9K057 SMR:C9K057 STRING:C9K057
Ensembl:ENST00000443222 ArrayExpress:C9K057 Bgee:C9K057
Uniprot:C9K057
Length = 108
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 62/109 (56%), Positives = 79/109 (72%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWTKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLE 113
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV+W+P E
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCVRWAPNE 108
>UNIPROTKB|C9JBJ7 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
OrthoDB:EOG4NZTTG GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922
HGNC:HGNC:704 ChiTaRS:ARPC1B IPI:IPI00927206
ProteinModelPortal:C9JBJ7 SMR:C9JBJ7 STRING:C9JBJ7
Ensembl:ENST00000414376 HOGENOM:HOG000195746 ArrayExpress:C9JBJ7
Bgee:C9JBJ7 Uniprot:C9JBJ7
Length = 102
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 59/103 (57%), Positives = 74/103 (71%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWTKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCV 107
P +NRIVTC DRNAYVWT + WKPTLV+LRINRAA CV
Sbjct: 62 PESNRIVTCGTDRNAYVWTLKG--RTWKPTLVILRINRAARCV 102
>UNIPROTKB|C9JTT6 [details] [associations]
symbol:ARPC1B "Actin-related protein 2/3 complex subunit
1B" species:9606 "Homo sapiens" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR017383 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005856
GO:GO:0030833 PANTHER:PTHR10709 EMBL:AC004922 HGNC:HGNC:704
ChiTaRS:ARPC1B IPI:IPI00925248 ProteinModelPortal:C9JTT6 SMR:C9JTT6
STRING:C9JTT6 Ensembl:ENST00000418347 ArrayExpress:C9JTT6
Bgee:C9JTT6 Uniprot:C9JTT6
Length = 83
Score = 252 (93.8 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 44/79 (55%), Positives = 57/79 (72%)
Query: 5 YSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA 64
+SF + P++ HAWN R Q+A PNN EVH+Y EK+ W+++ L H+ +VTGIDWA
Sbjct: 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIY--EKSGAKWTKVHELKEHNGQVTGIDWA 61
Query: 65 PNTNRIVTCSADRNAYVWT 83
P +NRIVTC DRNAYVWT
Sbjct: 62 PESNRIVTCGTDRNAYVWT 80
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 178 (67.7 bits), Expect = 4.3e-13, P = 4.3e-13
Identities = 55/222 (24%), Positives = 104/222 (46%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSA 75
AW+ LA + + ++ K D+ + L+GH+ +V ++W+ + + +CS
Sbjct: 52 AWSPCGNYLASCSFDATICIWS--KKDGDFECMATLEGHENEVKCVNWSSSGVYLASCSR 109
Query: 76 DRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEND 135
D++A++W +D++++ VL ++ V WSP EN + S I + Y E ++D
Sbjct: 110 DKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSPKENALVSASYDNTIKI-YKEVDDD 168
Query: 136 WWVAKHIKKPIKSTITCLDWHPNNHL-LGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKS 194
W H +ST+ L +H + L + CG D ++++ K ++S P W S
Sbjct: 169 W-ECSHTLIGHESTVWSLSFHSSGELFVSCGD-DKVLKIW----KCLKSGPSDVKWISIC 222
Query: 195 TLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
T+ +N I+ V +SK NK+ D +I +
Sbjct: 223 TIAG----YHNRP-----IYDVDWSKLNNKIATACGDDAIRI 255
Score = 116 (45.9 bits), Expect = 0.00015, P = 0.00015
Identities = 34/167 (20%), Positives = 69/167 (41%)
Query: 31 QEVHLYQYEKAANDWSQLDVL-DGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDK 89
Q + ++ ++ W+ +L +GH + + W+P N + +CS D +W++ + D
Sbjct: 20 QYIRIWAKNSDSDQWTCKSILTEGHTRTIRSVAWSPCGNYLASCSFDATICIWSKKDGDF 79
Query: 90 KWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKST 149
+ TL CV WS A+ S + + F E++ + +
Sbjct: 80 ECMATLE--GHENEVKCVNWSSSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQD 137
Query: 150 ITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKSTL 196
+ + W P + L S D ++++ D E + T G +ST+
Sbjct: 138 VKHVVWSPKENALVSASYDNTIKIYKEVDDDWECS--HTLIGHESTV 182
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 175 (66.7 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 52/199 (26%), Positives = 96/199 (48%)
Query: 38 YEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVL 97
++K +D+ + L+GH+ +V + WAP+ N + TCS D++ +VW + +D+ ++ VL
Sbjct: 88 WKKNEDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-YECVSVL 146
Query: 98 LRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHP 157
+ V W P + A+ S + + Y E E+DW ++ +ST+ L + P
Sbjct: 147 NSHTQDVKHVVWHPSQELLASASYDDTVKL-YREEEDDWVCCATLEGH-ESTVWSLAFDP 204
Query: 158 NNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVA 217
+ L S D VR++ Y+ E + GS+++ C+ L+ S I+ VA
Sbjct: 205 SGQRLASCSDDRTVRIWRQYLPGNEQGVACS--GSEASW-KCVCTLSGFHSRT--IYDVA 259
Query: 218 FSKDGNKLCWTSHDGSINV 236
+ + L D +I V
Sbjct: 260 WCQLTGTLATACGDDAIRV 278
Score = 138 (53.6 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 41/160 (25%), Positives = 70/160 (43%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVL-DGHDLKVTGIDWAPNTNRIVTCS 74
AWN LA ++ V ++ E + W VL +GH V + W+P N + + S
Sbjct: 23 AWNPAGTLLASCGGDRSVRIWGRE--GDSWICKSVLCEGHQRTVRKVAWSPCGNYLASAS 80
Query: 75 ADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEN 134
D +W +N DD + TL N + V W+P N A S + + V + E+
Sbjct: 81 FDATTCIWKKNEDDFECVTTLEGHE-NEVKS-VAWAPSGNLLATCSRDKSVWVWEVDEED 138
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVF 174
++ + + + + WHP+ LL S D V+++
Sbjct: 139 EYECVSVLNSHTQD-VKHVVWHPSQELLASASYDDTVKLY 177
Score = 126 (49.4 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 42/170 (24%), Positives = 70/170 (41%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ +++ LA + V LY+ E+ +DW L+GH+ V + + P+ R+ +CS D
Sbjct: 158 WHPSQELLASASYDDTVKLYREEE--DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215
Query: 77 RNAYVWTQ---NND--------DKKWKPTLVLLRIN-RAATCVKWSPLENKFAAGSGARL 124
R +W Q N+ + WK L + R V W L A G
Sbjct: 216 RTVRIWRQYLPGNEQGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGTLATACGDDA 275
Query: 125 ISVCYFESEND-----WWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTD 168
I V + +D + + H+ + + C+ W+P LL S D
Sbjct: 276 IRVFEEDPGSDPQQPTFSLTAHVPQAHSQDVNCVAWNPKERGLLASCSDD 325
>POMBASE|SPAC806.02c [details] [associations]
symbol:SPAC806.02c "Par A family ATPase/WD repeat iron
cluster assembly fusion protein (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0043234 "protein complex" evidence=NAS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051539 "4 iron,
4 sulfur cluster binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR000808 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS01215 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC806.02c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
eggNOG:COG2319 GO:GO:0016887 GO:GO:0051539 GO:GO:0016226
InterPro:IPR019591 Pfam:PF10609 PIR:T39094 RefSeq:NP_592852.1
ProteinModelPortal:Q9UT57 EnsemblFungi:SPAC806.02c.1 GeneID:2542122
KEGG:spo:SPAC806.02c OrthoDB:EOG4XKZGD NextBio:20803194
Uniprot:Q9UT57
Length = 608
Score = 176 (67.0 bits), Expect = 9.1e-12, P = 9.1e-12
Identities = 50/199 (25%), Positives = 87/199 (43%)
Query: 39 EKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLL 98
EK +DW L+GH+ +V I W+ N N + TCS D++ ++W DD+ + VL
Sbjct: 362 EKIDDDWECTAALEGHENEVKCIAWSCNGNYLATCSRDKSVWIWEATEDDE-FDCLAVLQ 420
Query: 99 RINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPN 158
+ V W P E+ +GS S+C++ + D W + +T+ L + PN
Sbjct: 421 EHTQDVKVVTWHPTEDLLVSGSYDN--SICFWRDDGDDWALTCQLQGHTNTVWALAFSPN 478
Query: 159 NHLLGCGSTDFKVRVFSAYIKDIESAP-QSTNWGSKSTLGNCLVELNNSSSGGGWIHSVA 217
+ L D V ++ + + A STN + + + G +++++
Sbjct: 479 GNTLASADNDGNVFLWIKISSNEDVATIDSTNILRPALQEEWKQQTSLPHIHKGAVYTIS 538
Query: 218 FSKDGNKLCWTSHDGSINV 236
+ D LC DG I V
Sbjct: 539 WMNDAT-LCSAGGDGKIVV 556
>UNIPROTKB|F1SU35 [details] [associations]
symbol:CIAO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097361 "CIA complex" evidence=IEA] [GO:0071817 "MMXD
complex" evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0071817 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:CU896688
Ensembl:ENSSSCT00000008907 Uniprot:F1SU35
Length = 337
Score = 171 (65.3 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 53/199 (26%), Positives = 95/199 (47%)
Query: 38 YEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVL 97
++K +D+ + L+GH+ +V + WAP+ N + TCS D++ +VW +++ PT V
Sbjct: 88 WKKNKDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEGTVENQPSDPTRVP 147
Query: 98 LRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHP 157
+ ++ V W P + A+ S + + Y E E+DW ++ +ST+ L + P
Sbjct: 148 YK-PQSMKKVLWHPSQELLASASYDDTVKL-YREEEDDWVCCATLEGH-ESTVWSLAFDP 204
Query: 158 NNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVA 217
+ L S D VR++ Y+ E + N GS + C+ L+ S I+ VA
Sbjct: 205 SGQRLASCSDDRTVRIWRQYLPGNEQGV-ACN-GSDPSW-KCICTLSGFHSRT--IYDVA 259
Query: 218 FSKDGNKLCWTSHDGSINV 236
+ + L D +I V
Sbjct: 260 WCQLTGALATACGDDAIRV 278
Score = 133 (51.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 43/170 (25%), Positives = 69/170 (40%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ +++ LA + V LY+ E+ +DW L+GH+ V + + P+ R+ +CS D
Sbjct: 158 WHPSQELLASASYDDTVKLYREEE--DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215
Query: 77 RNAYVWTQ-----------NNDDKKWKPTLVLLRIN-RAATCVKWSPLENKFAAGSGARL 124
R +W Q N D WK L + R V W L A G
Sbjct: 216 RTVRIWRQYLPGNEQGVACNGSDPSWKCICTLSGFHSRTIYDVAWCQLTGALATACGDDA 275
Query: 125 ISVCYFESEND-----WWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTD 168
I V + +D + + H+ + + C+ W+P LL S D
Sbjct: 276 IRVFEEDPGSDPQQPTFSLTAHLPQAHSQDVNCVAWNPKEQGLLASCSDD 325
Score = 132 (51.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 44/161 (27%), Positives = 70/161 (43%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVL-DGHDLKVTGIDWAPNTNRIVTCS 74
AWN LA ++ V ++ E + W VL +GH V + W+P N + + S
Sbjct: 23 AWNPAGTLLASCGGDRSVRIWGRE--GDSWICKSVLCEGHQRTVRKVAWSPCGNYLASAS 80
Query: 75 ADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEN 134
D +W +N DD + TL N + V W+P N A S + + V EN
Sbjct: 81 FDATTCIWKKNKDDFECVTTLEGHE-NEVKS-VAWAPSGNLLATCSRDKSVWVWEGTVEN 138
Query: 135 DWWVAKHIKKPIK-STITCLDWHPNNHLLGCGSTDFKVRVF 174
+ + P K ++ + WHP+ LL S D V+++
Sbjct: 139 Q--PSDPTRVPYKPQSMKKVLWHPSQELLASASYDDTVKLY 177
>UNIPROTKB|O76071 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9606 "Homo sapiens" [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0016226 "iron-sulfur
cluster assembly" evidence=IGI] [GO:0071817 "MMXD complex"
evidence=IDA] [GO:0097361 "CIA complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0008284 "positive regulation of cell
proliferation" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0008284 eggNOG:COG2319
GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HOGENOM:HOG000208901
OMA:SWKCVCT CTD:9391 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:U63810 EMBL:EF011618 EMBL:AC004020 EMBL:CR456802
EMBL:AK223257 EMBL:BC001395 EMBL:BC032812 IPI:IPI00008791
RefSeq:NP_004795.1 UniGene:Hs.12109 PDB:3FM0 PDBsum:3FM0
ProteinModelPortal:O76071 SMR:O76071 IntAct:O76071
MINT:MINT-1416717 STRING:O76071 PhosphoSite:O76071 PaxDb:O76071
PeptideAtlas:O76071 PRIDE:O76071 DNASU:9391 Ensembl:ENST00000488633
GeneID:9391 KEGG:hsa:9391 UCSC:uc002svs.3 GeneCards:GC02P096931
HGNC:HGNC:14280 HPA:HPA017882 MIM:604333 neXtProt:NX_O76071
PharmGKB:PA162382269 InParanoid:O76071 PhylomeDB:O76071
ChiTaRS:CIAO1 EvolutionaryTrace:O76071 GenomeRNAi:9391
NextBio:35187 Bgee:O76071 CleanEx:HS_CIAO1 Genevestigator:O76071
GermOnline:ENSG00000144021 Uniprot:O76071
Length = 339
Score = 171 (65.3 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 51/199 (25%), Positives = 94/199 (47%)
Query: 38 YEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVL 97
++K +D+ + L+GH+ +V + WAP+ N + TCS D++ +VW + +D+ ++ VL
Sbjct: 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-YECVSVL 146
Query: 98 LRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHP 157
+ V W P + A+ S + + Y E E+DW ++ +ST+ L + P
Sbjct: 147 NSHTQDVKHVVWHPSQELLASASYDDTVKL-YREEEDDWVCCATLEGH-ESTVWSLAFDP 204
Query: 158 NNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVA 217
+ L S D VR++ Y+ E + GS + C+ L+ S I+ +A
Sbjct: 205 SGQRLASCSDDRTVRIWRQYLPGNEQGVACS--GSDPSW-KCICTLSGFHSRT--IYDIA 259
Query: 218 FSKDGNKLCWTSHDGSINV 236
+ + L D +I V
Sbjct: 260 WCQLTGALATACGDDAIRV 278
Score = 137 (53.3 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 40/160 (25%), Positives = 70/160 (43%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVL-DGHDLKVTGIDWAPNTNRIVTCS 74
AWN LA ++ + ++ E + W VL +GH V + W+P N + + S
Sbjct: 23 AWNPAGTLLASCGGDRRIRIWGTE--GDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS 80
Query: 75 ADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEN 134
D +W +N DD + TL N + V W+P N A S + + V + E+
Sbjct: 81 FDATTCIWKKNQDDFECVTTLEGHE-NEVKS-VAWAPSGNLLATCSRDKSVWVWEVDEED 138
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVF 174
++ + + + + WHP+ LL S D V+++
Sbjct: 139 EYECVSVLNSHTQD-VKHVVWHPSQELLASASYDDTVKLY 177
Score = 130 (50.8 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 43/173 (24%), Positives = 72/173 (41%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ +++ LA + V LY+ E+ +DW L+GH+ V + + P+ R+ +CS D
Sbjct: 158 WHPSQELLASASYDDTVKLYREEE--DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDD 215
Query: 77 RNAYVWTQ---NND--------DKKWKPTLVLLRIN-RAATCVKWSPLENKFAAGSGARL 124
R +W Q N+ D WK L + R + W L A G
Sbjct: 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA 275
Query: 125 ISVCYFESEND-----WWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTDFKV 171
I V + +D + + H+ + + C+ W+P LL S D +V
Sbjct: 276 IRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEV 328
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 168 (64.2 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 43/160 (26%), Positives = 81/160 (50%)
Query: 38 YEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVL 97
++K +D+ L VL+GH+ +V + WAP+ N++ TCS D++ ++W + +D+ ++ V+
Sbjct: 88 WKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEEDE-YECVSVV 146
Query: 98 LRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHP 157
+ V W P + A+ S +VC ++ E+D W + + ST+ L + P
Sbjct: 147 NSHTQDVKHVVWHPTQELLASCSYDN--NVCVYKEEDDDWECRATLEGHTSTVWGLTFDP 204
Query: 158 NNHLLGCGSTDFKVRVFSAYIKDIE-SAPQSTNWGSKSTL 196
+ L S D V+++ K+ + Q T W TL
Sbjct: 205 SGQRLASCSDDRTVKIW----KECQPGGGQDTAWKCVCTL 240
Score = 155 (59.6 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 43/171 (25%), Positives = 74/171 (43%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ T++ LA + V +Y+ E +DW L+GH V G+ + P+ R+ +CS D
Sbjct: 158 WHPTQELLASCSYDNNVCVYKEED--DDWECRATLEGHTSTVWGLTFDPSGQRLASCSDD 215
Query: 77 RNAYVWTQ----NNDDKKWKPTLVLLRIN-RAATCVKWSPLENKFAAGSGARLISVCYFE 131
R +W + D WK L + R + W PL A G + V +
Sbjct: 216 RTVKIWKECQPGGGQDTAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVFKED 275
Query: 132 SEND-----WWVAKHIKKPIKSTITCLDWHPNNH--LLGCGSTDFKVRVFS 175
D + ++ H+ K + C+ WHP L+ C S + ++ V++
Sbjct: 276 ETADPDQPVFSLSAHVPKAHSQDVNCIAWHPKEAGLLVSC-SDNGEIAVWN 325
Score = 154 (59.3 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 47/182 (25%), Positives = 75/182 (41%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVL-DGHDLKVTGIDWAPNTNRIVTCS 74
AWN LA ++ + ++ E + W VL DGH V + W+P N + + S
Sbjct: 23 AWNPKGTLLASCGGDRAIRIWGRE--GDSWECKTVLQDGHQRAVRKVAWSPCGNYLASAS 80
Query: 75 ADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEN 134
D +W + NDD ++ VL CV W+P N+ A S + + + + E+
Sbjct: 81 FDATTCIWKKKNDD--FECLTVLEGHENEVKCVAWAPSGNQLATCSRDKSVWIWEVDEED 138
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIE-----SAPQSTN 189
++ + + + + WHP LL S D V V+ D E ST
Sbjct: 139 EYECVSVVNSHTQD-VKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTV 197
Query: 190 WG 191
WG
Sbjct: 198 WG 199
Score = 114 (45.2 bits), Expect = 0.00029, P = 0.00029
Identities = 32/134 (23%), Positives = 59/134 (44%)
Query: 48 LDVLDGH-DLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATC 106
L + H D + + W P + +C DR +W + D + K T++ RA
Sbjct: 8 LQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGREGDSWECK-TVLQDGHQRAVRK 66
Query: 107 VKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGS 166
V WSP N A+ S + C ++ +ND + + + ++ + C+ W P+ + L S
Sbjct: 67 VAWSPCGNYLASASFDA--TTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNQLATCS 124
Query: 167 TDFKVRVFSAYIKD 180
D V ++ +D
Sbjct: 125 RDKSVWIWEVDEED 138
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 166 (63.5 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 49/199 (24%), Positives = 91/199 (45%)
Query: 38 YEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVL 97
++K D+ L VL+GH+ +V + WAP+ + + TCS D++ ++W + +D+ ++ V+
Sbjct: 88 WKKTDEDFECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEEDE-YECLSVV 146
Query: 98 LRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHP 157
+ V W P + A+ S +C ++ E+D W + + +ST+ L + P
Sbjct: 147 NSHTQDVKHVVWHPTQELLASASYDN--KICIYKEEDDDWECRATLEGHESTVWSLTFDP 204
Query: 158 NNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVA 217
L S D V+++ ES +T GS C+ L S G I+ +A
Sbjct: 205 EGRRLASCSDDRTVKIWK------ES---TTGDGSSDESWKCICTL--SGFHGRTIYDIA 253
Query: 218 FSKDGNKLCWTSHDGSINV 236
+ + L D + V
Sbjct: 254 WCRLTGALATACGDDGVRV 272
Score = 139 (54.0 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 42/182 (23%), Positives = 78/182 (42%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVL-DGHDLKVTGIDWAPNTNRIVTCS 74
AWN LA ++ + ++ K + W VL DGH V + W+P + + S
Sbjct: 23 AWNPAGTTLATCGGDRAIRIWG--KEGDSWECKCVLSDGHQRTVRKVAWSPCGKYLASAS 80
Query: 75 ADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEN 134
D +W + ++D ++ VL CV W+P + A S + + + + E+
Sbjct: 81 FDATTCIWKKTDED--FECLTVLEGHENEVKCVAWAPSGSLLATCSRDKSVWIWEVDEED 138
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKS 194
++ + + + + WHP LL S D K+ ++ D E ++T G +S
Sbjct: 139 EYECLSVVNSHTQD-VKHVVWHPTQELLASASYDNKICIYKEEDDDWEC--RATLEGHES 195
Query: 195 TL 196
T+
Sbjct: 196 TV 197
Score = 136 (52.9 bits), Expect = 7.3e-07, P = 7.3e-07
Identities = 35/152 (23%), Positives = 66/152 (43%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ T++ LA + ++ +Y+ E +DW L+GH+ V + + P R+ +CS D
Sbjct: 158 WHPTQELLASASYDNKICIYKEED--DDWECRATLEGHESTVWSLTFDPEGRRLASCSDD 215
Query: 77 RNAYVWTQN-----NDDKKWKPTLVLLRIN-RAATCVKWSPLENKFAAGSGARLISVCYF 130
R +W ++ + D+ WK L + R + W L A G + V
Sbjct: 216 RTVKIWKESTTGDGSSDESWKCICTLSGFHGRTIYDIAWCRLTGALATACGDDGVRVFSE 275
Query: 131 ESEND-----WWVAKHIKKPIKSTITCLDWHP 157
+ D + ++ H+ K + C+ W+P
Sbjct: 276 DPTADPEQPIFALSAHVPKAHNQDVNCVSWNP 307
>MGI|MGI:1346998 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10090 "Mus musculus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007059 "chromosome segregation" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISO]
[GO:0071817 "MMXD complex" evidence=ISO] [GO:0097361 "CIA complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1346998 GO:GO:0007059 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0003700 GO:GO:0006357 GO:GO:0016226 GO:GO:0071817 HSSP:P16649
HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 ChiTaRS:CIAO1 EMBL:AK002314 EMBL:AK028376
EMBL:AL845368 EMBL:BC004089 IPI:IPI00320161 RefSeq:NP_079572.2
UniGene:Mm.45179 ProteinModelPortal:Q99KN2 SMR:Q99KN2 IntAct:Q99KN2
STRING:Q99KN2 PhosphoSite:Q99KN2 PaxDb:Q99KN2 PRIDE:Q99KN2
Ensembl:ENSMUST00000003759 GeneID:26371 KEGG:mmu:26371
UCSC:uc008mfb.2 InParanoid:Q99KN2 NextBio:304265 Bgee:Q99KN2
Genevestigator:Q99KN2 Uniprot:Q99KN2
Length = 339
Score = 166 (63.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/199 (24%), Positives = 93/199 (46%)
Query: 38 YEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVL 97
++K +D+ + L+GH+ +V + WAP+ N + TCS D++ +VW + +D+ ++ VL
Sbjct: 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-YECVSVL 146
Query: 98 LRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHP 157
+ V W P + A+ S + + ++ E D WV + +ST+ + + P
Sbjct: 147 SSHTQDVKHVVWHPSQELLASASYDDTVKL--YQEEGDDWVCCATLEGHESTVWSIAFDP 204
Query: 158 NNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVA 217
+ L S D VR++ Y+ E + GS + C+ L+ + I+ VA
Sbjct: 205 SGQRLASCSDDRTVRIWRQYLPGNEQGVACS--GSDPSW-KCICTLSGFHTRT--IYDVA 259
Query: 218 FSKDGNKLCWTSHDGSINV 236
+ + L D +I V
Sbjct: 260 WCQLTGALATACGDDAIRV 278
Score = 139 (54.0 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 40/160 (25%), Positives = 72/160 (45%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVL-DGHDLKVTGIDWAPNTNRIVTCS 74
AWN + LA ++++ ++ E + W VL +GH V + W+P N + + S
Sbjct: 23 AWNPSGTLLASCGGDRKIRIWGTE--GDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS 80
Query: 75 ADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEN 134
D +W +N DD + TL N + V W+P N A S + + V + E+
Sbjct: 81 FDATTCIWKKNQDDFECVTTLEGHE-NEVKS-VAWAPSGNLLATCSRDKSVWVWEVDEED 138
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVF 174
++ + + + + WHP+ LL S D V+++
Sbjct: 139 EYECVSVLSSHTQD-VKHVVWHPSQELLASASYDDTVKLY 177
Score = 136 (52.9 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 46/173 (26%), Positives = 72/173 (41%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ +++ LA + V LYQ E +DW L+GH+ V I + P+ R+ +CS D
Sbjct: 158 WHPSQELLASASYDDTVKLYQEE--GDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDD 215
Query: 77 RNAYVWTQ---NND--------DKKWKPTLVLLRIN-RAATCVKWSPLENKFAAGSGARL 124
R +W Q N+ D WK L + R V W L A G
Sbjct: 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHTRTIYDVAWCQLTGALATACGDDA 275
Query: 125 ISVCYFESEND-----WWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTDFKV 171
I V + +D + + H+++ + C+ W+P LL S D +V
Sbjct: 276 IRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEPGLLASCSDDGEV 328
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 164 (62.8 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 49/199 (24%), Positives = 93/199 (46%)
Query: 38 YEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVL 97
++K +D+ + L+GH+ +V + WAP+ N + TCS D++ +VW + +D+ ++ VL
Sbjct: 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE-YECVSVL 146
Query: 98 LRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHP 157
+ V W P + A+ S + + ++ E D WV + +ST+ + + P
Sbjct: 147 NSHTQDVKHVVWHPSQELLASASYDDTVKL--YQEEGDDWVCCATLEGHESTVWSIAFDP 204
Query: 158 NNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVA 217
+ L S D VR++ Y+ E + GS + C+ L+ + I+ VA
Sbjct: 205 SGQRLASCSDDRTVRIWRQYLPGNEQGVACS--GSDPSW-KCVCTLSGFHTRT--IYDVA 259
Query: 218 FSKDGNKLCWTSHDGSINV 236
+ + L D +I V
Sbjct: 260 WCQLTGALATACGDDAIRV 278
Score = 143 (55.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 41/160 (25%), Positives = 72/160 (45%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVL-DGHDLKVTGIDWAPNTNRIVTCS 74
AWN T LA ++++ ++ E + W VL +GH V + W+P N + + S
Sbjct: 23 AWNPTGTLLASCGGDRKIRIWGTE--GDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS 80
Query: 75 ADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEN 134
D +W +N DD + TL N + V W+P N A S + + V + E+
Sbjct: 81 FDATTCIWKKNQDDFECVTTLEGHE-NEVKS-VAWAPSGNLLATCSRDKSVWVWEVDEED 138
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVF 174
++ + + + + WHP+ LL S D V+++
Sbjct: 139 EYECVSVLNSHTQD-VKHVVWHPSQELLASASYDDTVKLY 177
Score = 137 (53.3 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 46/173 (26%), Positives = 72/173 (41%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ +++ LA + V LYQ E +DW L+GH+ V I + P+ R+ +CS D
Sbjct: 158 WHPSQELLASASYDDTVKLYQEE--GDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDD 215
Query: 77 RNAYVWTQ---NND--------DKKWKPTLVLLRIN-RAATCVKWSPLENKFAAGSGARL 124
R +W Q N+ D WK L + R V W L A G
Sbjct: 216 RTVRIWRQYLPGNEQGVACSGSDPSWKCVCTLSGFHTRTIYDVAWCQLTGALATACGDDA 275
Query: 125 ISVCYFESEND-----WWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTDFKV 171
I V + +D + + H+++ + C+ W+P LL S D +V
Sbjct: 276 IRVFEEDPGSDPQQPTFSLTAHLRQAHSQDVNCVAWNPKEAGLLASCSDDGEV 328
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 162 (62.1 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 47/199 (23%), Positives = 93/199 (46%)
Query: 38 YEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVL 97
++K +D+ L VL+GH+ +V + WAP+ N + TCS D++ ++W + +++ +++ V+
Sbjct: 88 WKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIW-EVDEENEYECVSVV 146
Query: 98 LRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHP 157
+ V W P + A+ S +VC ++ E+D W + + ST+ L + P
Sbjct: 147 NSHTQDVKHVVWHPTQELLASCSYDN--NVCVYKEEDDDWECRATLEGHTSTVWGLTFDP 204
Query: 158 NNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVA 217
+ L S D V+++ E P+ G+ + C+ L S G ++ +A
Sbjct: 205 SGQRLASCSDDCTVKIWK------ECQPEGGQEGTDAAW-KCVCTL--SGFHGRTVYDIA 255
Query: 218 FSKDGNKLCWTSHDGSINV 236
+ L D + V
Sbjct: 256 WCPLTGALATACGDDGVRV 274
Score = 156 (60.0 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 48/182 (26%), Positives = 74/182 (40%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVL-DGHDLKVTGIDWAPNTNRIVTCS 74
AWN LA ++ + ++ E + W VL DGH V + W+P N + + S
Sbjct: 23 AWNPKGTLLASCGGDRTIRIWGRE--GDSWECKTVLQDGHQRTVRKVAWSPCGNYLASAS 80
Query: 75 ADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEN 134
D +W + NDD ++ VL CV W+P N A S + + + + EN
Sbjct: 81 FDATTCIWKKKNDD--FECLTVLEGHENEVKCVAWAPSGNLLATCSRDKSVWIWEVDEEN 138
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIE-----SAPQSTN 189
++ + + + + WHP LL S D V V+ D E ST
Sbjct: 139 EYECVSVVNSHTQD-VKHVVWHPTQELLASCSYDNNVCVYKEEDDDWECRATLEGHTSTV 197
Query: 190 WG 191
WG
Sbjct: 198 WG 199
Score = 142 (55.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 43/174 (24%), Positives = 73/174 (41%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ T++ LA + V +Y+ E +DW L+GH V G+ + P+ R+ +CS D
Sbjct: 158 WHPTQELLASCSYDNNVCVYKEED--DDWECRATLEGHTSTVWGLTFDPSGQRLASCSDD 215
Query: 77 RNAYVWT-------QNNDDKKWKPTLVLLRIN-RAATCVKWSPLENKFAAGSGARLISVC 128
+W Q D WK L + R + W PL A G + V
Sbjct: 216 CTVKIWKECQPEGGQEGTDAAWKCVCTLSGFHGRTVYDIAWCPLTGALATACGDDGVRVF 275
Query: 129 YFESEND-----WWVAKHIKKPIKSTITCLDWHPNNH--LLGCGSTDFKVRVFS 175
+ D + ++ H+ K + C+ WHP L+ C S + ++ V++
Sbjct: 276 KEDETADPDQPAFSLSAHVPKAHTQDVNCIAWHPKEAGLLVSC-SDNGEIAVWN 328
Score = 117 (46.2 bits), Expect = 0.00013, P = 0.00013
Identities = 31/128 (24%), Positives = 57/128 (44%)
Query: 48 LDVLDGH-DLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATC 106
L + H D + + W P + +C DR +W + D + K T++ R
Sbjct: 8 LQKFNAHPDSRCWYVAWNPKGTLLASCGGDRTIRIWGREGDSWECK-TVLQDGHQRTVRK 66
Query: 107 VKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGS 166
V WSP N A+ S + C ++ +ND + + + ++ + C+ W P+ +LL S
Sbjct: 67 VAWSPCGNYLASASFDA--TTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLLATCS 124
Query: 167 TDFKVRVF 174
D V ++
Sbjct: 125 RDKSVWIW 132
>ASPGD|ASPL0000060163 [details] [associations]
symbol:AN1385 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0002098 "tRNA wobble uridine modification"
evidence=IEA] [GO:0016226 "iron-sulfur cluster assembly"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000208901 EMBL:AACD01000019 RefSeq:XP_658989.1
ProteinModelPortal:Q5BDJ5 STRING:Q5BDJ5 GeneID:2877158
KEGG:ani:AN1385.2 OMA:TAIWENI OrthoDB:EOG4CVKH5 Uniprot:Q5BDJ5
Length = 446
Score = 149 (57.5 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 34/118 (28%), Positives = 55/118 (46%)
Query: 39 EKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNND-DKKWKPTLVL 97
E ++W +LDGHD +V + W+ + + TCS D++ ++W D D ++ V+
Sbjct: 130 EDEDDEWRFAVLLDGHDSEVKSVSWSASGMLLATCSRDKSIWIWEDLEDGDNNFETVAVM 189
Query: 98 LRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDW 155
CV W P E A+GS I + + E +DW IK T+ +DW
Sbjct: 190 QEHEGDVKCVAWHPAEECLASGSYDDTIRI-WREDIDDWGQVACIKGHT-GTVWGIDW 245
Score = 51 (23.0 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 184 APQ-STNWGSKSTLGNC--LVELNNSSSGGGWIHSVAFSKDGNK----LCWTSHDGSINV 236
AP ST W + + + E+N+ + W +DGNK L T+ DGSI V
Sbjct: 386 APHPSTEWSIVAVVNGAHGIYEINHVA----WAKRADRGRDGNKEEEVLITTADDGSIKV 441
>DICTYBASE|DDB_G0269728 [details] [associations]
symbol:ciao1 "putative cytosolic iron-sulfur assembly
protein" species:44689 "Dictyostelium discoideum" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0269728 EMBL:AAFI02000005
GenomeReviews:CM000150_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
HSSP:P63005 RefSeq:XP_646229.1 ProteinModelPortal:Q55DA2
STRING:Q55DA2 EnsemblProtists:DDB0266672 GeneID:8617183
KEGG:ddi:DDB_G0269728 ProtClustDB:CLSZ2497289 Uniprot:Q55DA2
Length = 333
Score = 142 (55.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 38/161 (23%), Positives = 70/161 (43%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ + LA + + + ++ DW ++ L GH+ + + + + +++V+C D
Sbjct: 168 WHPNEELLASSSYDDTIKFWK--DIDGDWECINTLTGHESSIWDLAFNKDGDKLVSCGED 225
Query: 77 RNAYVWTQNNDDKKWKPTLVLLRIN-RAATCVKWSPLENKFAAGSGARLISVCYFESEND 135
+ W + +++KW N R + WS L N GS S+ ++E E+D
Sbjct: 226 KLVLFWKFDKENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADD--SIIFYEQESD 283
Query: 136 WWVAKH---IKKPIK--STITCLDWHPN--NHLLGCGSTDF 169
K+ +KK S + C W+P N L CG F
Sbjct: 284 DTPDKYKIILKKKNAHDSDVNCTKWNPKFKNILASCGDDGF 324
Score = 140 (54.3 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 39/167 (23%), Positives = 69/167 (41%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSA 75
AW+ + LA N++ + ++ + W + L+GH+ V + W+P + S
Sbjct: 31 AWHPNGEILATCANDKYIQIWSKDTNGK-WGLVQSLEGHEKTVRRVAWSPCGRFLAGASF 89
Query: 76 DRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEND 135
D + +W ++ D+ ++ L V W A S + I + E +ND
Sbjct: 90 DASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSRDKSIWIWQMEDDND 149
Query: 136 WWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIE 182
+ I I C+ WHPN LL S D ++ + KDI+
Sbjct: 150 FECLS-INSGHGQDIKCVLWHPNEELLASSSYDDTIKFW----KDID 191
Score = 121 (47.7 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 38/168 (22%), Positives = 76/168 (45%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSA 75
AW+ + LA + +++ K +++ + L+GH +V + W + TCS
Sbjct: 76 AWSPCGRFLAGASFDASTSIWEKSKDELEFTHVSSLEGHTYEVKSVAWDSTGTLLATCSR 135
Query: 76 DRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEND 135
D++ ++W Q DD ++ + + CV W P E A+ S I + + + D
Sbjct: 136 DKSIWIW-QMEDDNDFECLSINSGHGQDIKCVLWHPNEELLASSSYDDTIKF-WKDIDGD 193
Query: 136 WWVAKHIKKPIKSTITCLDWHPN-NHLLGCGSTDFKVRVFSAYIKDIE 182
W + +S+I L ++ + + L+ CG K+ +F + K+ E
Sbjct: 194 WECINTLTGH-ESSIWDLAFNKDGDKLVSCGED--KLVLFWKFDKENE 238
Score = 116 (45.9 bits), Expect = 0.00017, P = 0.00017
Identities = 38/175 (21%), Positives = 73/175 (41%)
Query: 12 VTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIV 71
V + AW++T LA ++ + ++Q E ND+ L + GH + + W PN +
Sbjct: 118 VKSVAWDSTGTLLATCSRDKSIWIWQMEDD-NDFECLSINSGHGQDIKCVLWHPNEELLA 176
Query: 72 TCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFE 131
+ S D W + D W+ L + + ++ +K + +L+ F+
Sbjct: 177 SSSYDDTIKFWKDIDGD--WECINTLTGHESSIWDLAFNKDGDKLVSCGEDKLVLFWKFD 234
Query: 132 SENDWWV-AKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESAP 185
EN+ W+ K I +DW + + GS D + +F Y ++ + P
Sbjct: 235 KENEKWINIFKFKNENSRPIYSIDWSSLTNTIVTGSADDSI-IF--YEQESDDTP 286
Score = 43 (20.2 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 199 CLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHD 231
C+ L S I +AF+KDG+KL D
Sbjct: 196 CINTLTGHESS---IWDLAFNKDGDKLVSCGED 225
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 144 (55.7 bits), Expect = 8.0e-08, P = 8.0e-08
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 40 KAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLR 99
K ++ + L+GH+ +V + WAP+ + + TCS D++ +VW + +++++++ VL
Sbjct: 90 KKKEEFECITTLEGHENEVKSVAWAPSGSLLATCSRDKSVWVW-EVDEEEEYECVSVLNS 148
Query: 100 INRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNN 159
+ V W P + A+ S + + Y E E+DW ++ ST+ L +
Sbjct: 149 HTQDVKHVVWHPNQELLASASYDDSVKL-YREEEDDWVCCATLEGHT-STVWSLAFDQTG 206
Query: 160 HLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKSTL 196
L S D VR++ + + NW TL
Sbjct: 207 EQLATCSDDKTVRIWRQLGTGEQGSKSDPNWKCVCTL 243
Score = 132 (51.5 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 42/177 (23%), Positives = 72/177 (40%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ ++ LA + V LY+ E+ +DW L+GH V + + ++ TCS D
Sbjct: 158 WHPNQELLASASYDDSVKLYREEE--DDWVCCATLEGHTSTVWSLAFDQTGEQLATCSDD 215
Query: 77 RNAYVWTQ-------NNDDKKWKPTLVLLRIN-RAATCVKWSPLENKFAAGSGARLISVC 128
+ +W Q + D WK L + R V W+ L A G + +
Sbjct: 216 KTVRIWRQLGTGEQGSKSDPNWKCVCTLTGYHTRTVYDVNWNHLTGAIATACGDDAVRIF 275
Query: 129 YFESEND-----WWVAKHIKKPIKSTITCLDWHPNN-HLLGCGSTDFKVRVFSAYIK 179
+ +D + + H+ + + C+ WHP +LL S D ++ F Y K
Sbjct: 276 EEDPGSDPLQPTFSLTAHMPRAHTQDVNCVTWHPKEPNLLASCSDDGEM-AFWRYQK 331
Score = 125 (49.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 37/160 (23%), Positives = 70/160 (43%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVL-DGHDLKVTGIDWAPNTNRIVTCS 74
AWN + LA ++ + ++ K ++W VL +GH V + W+P N + + S
Sbjct: 23 AWNPSGTLLASCGGDRTIRIWG--KDGDNWVCKSVLGEGHQRTVRKVSWSPCGNYLASAS 80
Query: 75 ADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEN 134
D +W + ++ + TL N + V W+P + A S + + V + E
Sbjct: 81 FDATTCIWMKKKEEFECITTLEGHE-NEVKS-VAWAPSGSLLATCSRDKSVWVWEVDEEE 138
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVF 174
++ + + + + WHPN LL S D V+++
Sbjct: 139 EYECVSVLNSHTQD-VKHVVWHPNQELLASASYDDSVKLY 177
Score = 38 (18.4 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 213 IHSVAFSKDGNKLCWTSHDGSINV 236
+ S+AF + G +L S D ++ +
Sbjct: 197 VWSLAFDQTGEQLATCSDDKTVRI 220
>UNIPROTKB|B4LJT7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7244 "Drosophila virilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH940648 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_002049403.1 ProteinModelPortal:B4LJT7 STRING:B4LJT7
EnsemblMetazoa:FBtr0237487 GeneID:6626094 KEGG:dvi:Dvir_GJ21562
FlyBase:FBgn0208682 InParanoid:B4LJT7 Uniprot:B4LJT7
Length = 331
Score = 143 (55.4 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 47/223 (21%), Positives = 103/223 (46%)
Query: 20 TRQQLAFTPNNQEVHLYQYEKAANDWSQLD---VLDGHDLKVTGIDWAPNTNRIVTCSAD 76
T +++ ++P + + ++ WS+ + L+GH+ +V + W+ + + TCS D
Sbjct: 61 TIREVRWSPCGEYLASASFDATTAIWSKHECTATLEGHENEVKSVSWSRSGGLLATCSRD 120
Query: 77 RNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFES--EN 134
++ ++W DD+ ++ VL ++ V W P + A+ S I + + ES ++
Sbjct: 121 KSVWIWEVAGDDE-FECAAVLNAHSQDVKRVVWHPTKEVLASASYDNTIKM-FAESALDS 178
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSK 193
DW + ST+ +D+ + L+ C S D ++++ AY ++ + + K
Sbjct: 179 DWDCTATLSSHT-STVWSIDFDADGERLVSC-SDDATLKIWRAYHPGNDAGIATPD---K 233
Query: 194 STLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
+T+ C+ L+ S I+ V++ K + D I +
Sbjct: 234 TTVWKCVCTLSGEHSRA--IYDVSWCKQTGLIASACGDDGIRI 274
>UNIPROTKB|B3NQR5 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7220 "Drosophila erecta"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH954179 OrthoDB:EOG45DV4X RefSeq:XP_001975575.1
ProteinModelPortal:B3NQR5 EnsemblMetazoa:FBtr0142445 GeneID:6549053
KEGG:der:Dere_GG22391 FlyBase:FBgn0114563 Uniprot:B3NQR5
Length = 335
Score = 142 (55.0 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 52/223 (23%), Positives = 98/223 (43%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ Q LA + ++ K++ ++ L+GH+ +V + W+ + + TCS D
Sbjct: 67 WSPCGQYLASASFDATTAIWS--KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 77 RNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFES--EN 134
++ ++W DD+ ++ VL + V W P + A+ S I + Y E +N
Sbjct: 125 KSVWIWEVAGDDE-FECAAVLNSHTQDVKRVVWHPTKEVLASASYDNTIKM-YAEDPVDN 182
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSK 193
DW + STI +D+ + L+ C S D ++++ AY SA +T +
Sbjct: 183 DWDCTATLTSHT-STIWGIDFDADGERLVSC-SDDTTIKIWKAYHPG-NSAGVATP--DQ 237
Query: 194 STLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
T+ C+ L+ S I+ V++ K + D I +
Sbjct: 238 QTVWKCVCTLSGQHSRA--IYDVSWCKLTGLIATACGDDGIRI 278
>UNIPROTKB|B7QKS1 [details] [associations]
symbol:ISCW023049 "Probable cytosolic iron-sulfur protein
assembly protein" species:6945 "Ixodes scapularis" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X EMBL:DS961804 RefSeq:XP_002415776.1
UniGene:Isc.5088 ProteinModelPortal:B7QKS1 STRING:B7QKS1
EnsemblMetazoa:ISCW023049-RA GeneID:8042725
KEGG:isc:IscW_ISCW023049 VectorBase:ISCW023049 CTD:8042725
PhylomeDB:B7QKS1 Uniprot:B7QKS1
Length = 315
Score = 141 (54.7 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 38/161 (23%), Positives = 64/161 (39%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTN-RIVTCSA 75
W+ R +LA + + + E +DW LD H V G+ + P ++ +C+A
Sbjct: 155 WHPDRDELASASYDNTIRFFCEE--VDDWQCYCTLDKHASTVWGLSFGPGPEPQLASCAA 212
Query: 76 DRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEND 135
D + YVW D + W+ L R R V W A G + V + + D
Sbjct: 213 DGSVYVWGTKGDRRSWELCGTLERHPRPVYDVSWCRTRGFLATACGDNAVRV-FVKDGGD 271
Query: 136 --WWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVF 174
W + + + + + W P+ LL D VR++
Sbjct: 272 CSWRLGCTLTQAHSQDVNSVSWSPSGGLLASAGDDGYVRLW 312
Score = 119 (46.9 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 48/184 (26%), Positives = 77/184 (41%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVL-DGHDLKVTGIDWAPNTNRIVTCS 74
AWN + LA ++ + L+ E W VL DGH V G+ W+ N R + S
Sbjct: 20 AWNPSGTILASCGGDKSIRLWGLE--GGSWVCKSVLLDGHQRTVRGVSWS-NCGRYLASS 76
Query: 75 A-DRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFE-S 132
+ D +W + +D + TL N C WSP +F A + +R +V +E
Sbjct: 77 SFDGTTCIWRRQDDTFESCATLEGHE-NEVKAC-GWSP-SGRFLA-TCSRDKTVWIWEVG 132
Query: 133 ENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIE-----SAPQS 187
E++ + ++ + + WHP+ L S D +R F + D + S
Sbjct: 133 EDEEFECASVQTCHSQDVKKVLWHPDRDELASASYDNTIRFFCEEVDDWQCYCTLDKHAS 192
Query: 188 TNWG 191
T WG
Sbjct: 193 TVWG 196
Score = 109 (43.4 bits), Expect = 0.0010, P = 0.0010
Identities = 36/161 (22%), Positives = 74/161 (45%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSA 75
+W+N + LA + + +++ + + + L+GH+ +V W+P+ + TCS
Sbjct: 65 SWSNCGRYLASSSFDGTTCIWRRQD--DTFESCATLEGHENEVKACGWSPSGRFLATCSR 122
Query: 76 DRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEND 135
D+ ++W + +D++++ V ++ V W P ++ A+ S I + E +D
Sbjct: 123 DKTVWIW-EVGEDEEFECASVQTCHSQDVKKVLWHPDRDELASASYDNTIRF-FCEEVDD 180
Query: 136 WWVAKHIKKPIKSTITCLDWHPNNH--LLGCGSTDFKVRVF 174
W + K ST+ L + P L C + D V V+
Sbjct: 181 WQCYCTLDKHA-STVWGLSFGPGPEPQLASCAA-DGSVYVW 219
>UNIPROTKB|B4KTK4 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7230 "Drosophila mojavensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH933808 OrthoDB:EOG45DV4X RefSeq:XP_002005652.1
ProteinModelPortal:B4KTK4 EnsemblMetazoa:FBtr0169681 GeneID:6579773
KEGG:dmo:Dmoj_GI18956 FlyBase:FBgn0141695 InParanoid:B4KTK4
Uniprot:B4KTK4
Length = 331
Score = 141 (54.7 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 48/223 (21%), Positives = 104/223 (46%)
Query: 20 TRQQLAFTPNNQEVHLYQYEKAANDWSQLD---VLDGHDLKVTGIDWAPNTNRIVTCSAD 76
T +++ ++P + + ++ WS+ + L+GH+ +V + W+ + + TCS D
Sbjct: 61 TIREVRWSPCGEYLASASFDATTAIWSKHECTATLEGHENEVKSVSWSRSGGLLATCSRD 120
Query: 77 RNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFES--EN 134
++ ++W DD+ ++ VL ++ V W P + A+ S I + Y ES ++
Sbjct: 121 KSVWIWEVAGDDE-FECAAVLNAHSQDVKRVVWHPTKEILASASYDNTIKM-YAESALDS 178
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSK 193
DW + ST+ +D+ + L+ C S D ++++ AY E+ + + K
Sbjct: 179 DWDCTATLSSHT-STVWSIDFDADGERLVSC-SDDATLKIWRAYHPGNEAGIATPD---K 233
Query: 194 STLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
+T+ C+ L+ + I+ V++ K + D +I +
Sbjct: 234 TTVWKCVCTLSGLHTRA--IYDVSWCKLTGLIASACGDDAIRI 274
>UNIPROTKB|B4P7Q3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7245 "Drosophila yakuba"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000158 OrthoDB:EOG45DV4X RefSeq:XP_002091367.1
ProteinModelPortal:B4P7Q3 STRING:B4P7Q3 EnsemblMetazoa:FBtr0258798
GeneID:6530451 KEGG:dya:Dyak_GE12280 FlyBase:FBgn0230036
Uniprot:B4P7Q3
Length = 335
Score = 141 (54.7 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 53/223 (23%), Positives = 98/223 (43%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ Q LA + ++ K++ ++ L+GH+ +V + W+ + + TCS D
Sbjct: 67 WSPCGQYLASASFDATTAIWS--KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 77 RNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFES--EN 134
++ ++W DD+ ++ VL + V W P + A+ S I + Y E +N
Sbjct: 125 KSVWIWEVAGDDE-FECAAVLNSHTQDVKRVVWHPTKEILASASYDNTIKM-YAEEPIDN 182
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSK 193
DW + STI +D+ + L+ C S D V+++ AY SA +T +
Sbjct: 183 DWDCTATLTSHT-STIWGIDFDADGERLVSC-SDDTTVKIWRAYHPG-NSAGVATP--DQ 237
Query: 194 STLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
T+ C+ L+ S I+ V++ K + D I +
Sbjct: 238 QTVWKCVCTLSGQHSRA--IYDVSWCKLTGLIATACGDDGIRI 278
>SGD|S000002675 [details] [associations]
symbol:CIA1 "Component of cytosolic iron-sulfur protein
assembly (CIA) machinery" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IMP] [GO:0016226
"iron-sulfur cluster assembly" evidence=IGI;IMP] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0002098 "tRNA
wobble uridine modification" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000002675 GO:GO:0005829
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BK006938 GO:GO:0016226 EMBL:U51030 GO:GO:0002098 GO:GO:0000055
HOGENOM:HOG000208901 GeneTree:ENSGT00700000104486 OMA:TAIWENI
OrthoDB:EOG4CVKH5 PIR:S70127 RefSeq:NP_010553.3 RefSeq:NP_010559.3
PDB:2HES PDBsum:2HES ProteinModelPortal:Q05583 SMR:Q05583
DIP:DIP-1836N IntAct:Q05583 MINT:MINT-405749 STRING:Q05583
PaxDb:Q05583 PeptideAtlas:Q05583 EnsemblFungi:YDR267C GeneID:851860
GeneID:851866 KEGG:sce:YDR267C KEGG:sce:YDR273W CYGD:YDR267c
EvolutionaryTrace:Q05583 NextBio:969800 Genevestigator:Q05583
GermOnline:YDR267C Uniprot:Q05583
Length = 330
Score = 140 (54.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 55/228 (24%), Positives = 102/228 (44%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVL---DGHDLKVTGIDWAPNTNRIVT 72
AW LA + V ++ E++A+ ++D+L +GH+ +V G+ W+ + + T
Sbjct: 65 AWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLAT 124
Query: 73 CSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFES 132
CS D++ ++W + ++++ VL ++ V W P E A+ S + + ++
Sbjct: 125 CSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRI--WKD 182
Query: 133 ENDWWVAKHIKKPIKSTITCLDWHPNNHLLG-C-GSTDFKVRVFSAYIKDIESAPQSTNW 190
+D W + + T+ D+ + C GS D VRV+ Y+ D E Q W
Sbjct: 183 YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWK-YMGDDEDDQQE--W 239
Query: 191 GSKSTLGNCLV-ELNNSSSG-GGWIHSVAFSKDGNKLCWTSHDGSINV 236
++ L + ++ N + G G I SV DG + DG V
Sbjct: 240 VCEAILPDVHKRQVYNVAWGFNGLIASVG--ADGVLAVYEEVDGEWKV 285
>UNIPROTKB|B4JW81 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7222 "Drosophila grimshawi"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH916375 OMA:SWKCVCT OrthoDB:EOG45DV4X
RefSeq:XP_001995147.1 ProteinModelPortal:B4JW81 STRING:B4JW81
EnsemblMetazoa:FBtr0158402 GeneID:6569131 KEGG:dgr:Dgri_GH22988
FlyBase:FBgn0130445 InParanoid:B4JW81 Uniprot:B4JW81
Length = 331
Score = 138 (53.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 45/207 (21%), Positives = 97/207 (46%)
Query: 20 TRQQLAFTPNNQEVHLYQYEKAANDWSQLD---VLDGHDLKVTGIDWAPNTNRIVTCSAD 76
T +++ ++P + + ++ WS+ + L+GH+ +V + W+ + + TCS D
Sbjct: 61 TIREVRWSPCGEYLASASFDATTAIWSKHECNATLEGHENEVKSVSWSQSGGLLATCSRD 120
Query: 77 RNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFES--EN 134
++ ++W DD+ ++ VL + V W P + A+ S I + Y ES ++
Sbjct: 121 KSVWIWEVAGDDE-FECAAVLNAHTQDVKRVVWHPSKEILASASYDNTIKM-YAESALDS 178
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSK 193
DW + ST+ +D+ + L+ C S D ++++ AY E+ + + K
Sbjct: 179 DWDCTATLSSHT-STVWSIDFEADGERLVSC-SDDTTLKIWRAYHPGNEAGIATPD---K 233
Query: 194 STLGNCLVELNNSSSGGGWIHSVAFSK 220
+T+ C+ + S ++ V++ K
Sbjct: 234 TTVWKCVCTVAGQHSRA--VYDVSWCK 258
>UNIPROTKB|Q17GR9 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7159 "Aedes aegypti" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:CH477256
RefSeq:XP_001662680.1 UniGene:Aae.8569 ProteinModelPortal:Q17GR9
STRING:Q17GR9 EnsemblMetazoa:AAEL002912-RA GeneID:5576487
KEGG:aag:AaeL_AAEL002912 VectorBase:AAEL002912 HOGENOM:HOG000208901
OMA:SWKCVCT OrthoDB:EOG45DV4X PhylomeDB:Q17GR9 Uniprot:Q17GR9
Length = 337
Score = 138 (53.6 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 48/188 (25%), Positives = 89/188 (47%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSA 75
AW+ Q LA + V ++ +K + ++ L+GH+ +V + W+ + + + TCS
Sbjct: 67 AWSPCGQYLASASFDATVAIW--DKKSGEFECNATLEGHENEVKSVSWSKSGSLLATCSR 124
Query: 76 DRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFE--SE 133
D++ +VW +D+ ++ VL + V+W P E+ A+ S I + Y E ++
Sbjct: 125 DKSVWVWEVAQEDE-YECAAVLNTHTQDVKKVEWHPHEDILASASYDNTIKL-YKEDLAD 182
Query: 134 NDWWVAKHIKKPIKSTITCLDWHPN-NHLLGCGSTDFKVRVFSAYIKDIE---SAPQSTN 189
+DW + +ST+ + + + N L C S D V+++ Y E S P +T
Sbjct: 183 SDWSSFDTLVSH-ESTVWSISFDGSGNRLASC-SDDQTVKIWQEYKPGNEFGVSCPDNTP 240
Query: 190 -WGSKSTL 196
W TL
Sbjct: 241 VWKCVCTL 248
Score = 115 (45.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 37/181 (20%), Positives = 77/181 (42%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVL-DGHDLKVTGIDWAPNTNRIVTCSA 75
W+ LA ++ + ++ E A+ W VL DGH + + W+P + + S
Sbjct: 22 WHPKGNVLATCGEDKTIRIWA-EDASQRWVAKTVLSDGHSRTIRDVAWSPCGQYLASASF 80
Query: 76 DRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESEND 135
D +W + + + + TL N + V WS + A S + + V E++
Sbjct: 81 DATVAIWDKKSGEFECNATLEGHE-NEVKS-VSWSKSGSLLATCSRDKSVWVWEVAQEDE 138
Query: 136 WWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKST 195
+ A + + + ++WHP+ +L S D ++++ + D + + T +ST
Sbjct: 139 YECAAVLNTHTQD-VKKVEWHPHEDILASASYDNTIKLYKEDLADSDWSSFDTLVSHEST 197
Query: 196 L 196
+
Sbjct: 198 V 198
Score = 41 (19.5 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 213 IHSVAFSKDGNKLCWTSHDGSINV 236
+ S++F GN+L S D ++ +
Sbjct: 198 VWSISFDGSGNRLASCSDDQTVKI 221
>UNIPROTKB|B3MC74 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7217 "Drosophila ananassae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CH902619 OrthoDB:EOG45DV4X RefSeq:XP_001959352.1
ProteinModelPortal:B3MC74 STRING:B3MC74 EnsemblMetazoa:FBtr0116785
GeneID:6494943 KEGG:dan:Dana_GF12085 FlyBase:FBgn0089124
InParanoid:B3MC74 Uniprot:B3MC74
Length = 335
Score = 137 (53.3 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 42/201 (20%), Positives = 91/201 (45%)
Query: 38 YEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVL 97
+ K++ ++ L+GH+ +V + W+ + + TCS D++ ++W DD+ ++ VL
Sbjct: 86 WSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDE-FECAAVL 144
Query: 98 LRINRAATCVKWSPLENKFAAGSGARLISVCYFES-ENDWWVAKHIKKPIKSTITCLDWH 156
+ V W P + A+ S I + ++ ++DW + ST+ +D+
Sbjct: 145 NPHTQDVKRVVWHPTKELLASASYDNTIKMFAEDALDSDWDCVATLSSHT-STVWSIDFD 203
Query: 157 PNNH-LLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHS 215
L+ C S D ++++ AY ++ + + K T+ C+ ++ S I+
Sbjct: 204 ATGERLVSC-SDDTSLKIWQAYHPGNDAGVATPD---KQTVWKCVCTISGQHSRA--IYD 257
Query: 216 VAFSKDGNKLCWTSHDGSINV 236
V++ K N + D I +
Sbjct: 258 VSWCKLTNLIATACGDDGIRI 278
>UNIPROTKB|B4MY77 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7260 "Drosophila willistoni"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 OMA:SWKCVCT OrthoDB:EOG45DV4X EMBL:CH963894
RefSeq:XP_002066080.1 ProteinModelPortal:B4MY77 STRING:B4MY77
EnsemblMetazoa:FBtr0252775 GeneID:6643305 KEGG:dwi:Dwil_GK22124
FlyBase:FBgn0224109 InParanoid:B4MY77 Uniprot:B4MY77
Length = 335
Score = 136 (52.9 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 48/223 (21%), Positives = 99/223 (44%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ Q LA + ++ K++ ++ L+GH+ +V + W+ + + TCS D
Sbjct: 67 WSPCGQYLASASFDATTAIWS--KSSGEFECNATLEGHENEVKSVSWSKSGGLLATCSRD 124
Query: 77 RNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFES--EN 134
++ ++W DD+ ++ VL + V W P + A+ S I + + ES ++
Sbjct: 125 KSVWIWEVAGDDE-FECAAVLNPHTQDVKRVVWHPTKEILASASYDNTIKM-FAESALDS 182
Query: 135 DWWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSK 193
DW + ST+ +D+ + L+ C S D ++++ AY ++ + + K
Sbjct: 183 DWDCTATLSSHT-STVWSIDFDADGERLVSC-SDDTTLKIWRAYHPGNDAGVATPD---K 237
Query: 194 STLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
T+ C+ L+ S I+ V++ K + D I +
Sbjct: 238 QTVWKCVCTLSGQHSRA--IYDVSWCKLTGLIATACGDDGIRI 278
>UNIPROTKB|B4HRQ6 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7238 "Drosophila sechellia"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH480816 OrthoDB:EOG45DV4X RefSeq:XP_002033907.1
ProteinModelPortal:B4HRQ6 EnsemblMetazoa:FBtr0203159 GeneID:6609216
KEGG:dse:Dsec_GM20174 FlyBase:FBgn0175057 Uniprot:B4HRQ6
Length = 335
Score = 135 (52.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 49/240 (20%), Positives = 104/240 (43%)
Query: 6 SFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLD-------VLDGHDLKV 58
++G + + T +++ ++P Q + ++ WS+ L+GH+ +V
Sbjct: 47 TWGTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEV 106
Query: 59 TGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAA 118
+ W+ + + TCS D++ ++W DD+ ++ VL + V W P ++ A+
Sbjct: 107 KSVSWSRSGGLLATCSRDKSVWIWEVAGDDE-FECAAVLNPHTQDVKRVVWHPTKDVLAS 165
Query: 119 GSGARLISVCYFES-ENDWWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTDFKVRVFSA 176
S I + E +NDW + ST+ +D+ + L+ C S D ++++ A
Sbjct: 166 ASYDNTIKMFAEEPIDNDWDCTATLTSHT-STVWGIDFDADGERLVSC-SDDTTIKIWRA 223
Query: 177 YIKDIESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
Y +A +T + T+ C+ ++ S I+ V++ K + D I +
Sbjct: 224 YHPG-NTAGVATP--EQQTVWKCVCTVSGQHSRA--IYDVSWCKLTGLIATACGDDGIRI 278
>UNIPROTKB|A7RWD2 [details] [associations]
symbol:v1g226592 "Probable cytosolic iron-sulfur protein
assembly protein" species:45351 "Nematostella vectensis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS469546
RefSeq:XP_001636358.1 UniGene:Nve.10750 ProteinModelPortal:A7RWD2
STRING:A7RWD2 EnsemblMetazoa:NEMVEDRAFT_v1g226592-RA GeneID:5516269
KEGG:nve:NEMVE_v1g226592 Uniprot:A7RWD2
Length = 327
Score = 133 (51.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 44/187 (23%), Positives = 85/187 (45%)
Query: 51 LDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWS 110
L+GH+ +V +DW+ + + + TC D++ ++W DD+ ++ V+ + V W
Sbjct: 90 LEGHENEVKSVDWSVSGSLLATCGRDKSVWIWEVQEDDE-YECASVIHSHTQDVKKVVWH 148
Query: 111 PLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPN-NHLLGCGSTDF 169
P + A+ S I + Y E E+DW ++ +ST+ + + + + ++ C S D
Sbjct: 149 PTKEILASCSYDDTIKL-YKEDEDDWSCCDTLEGH-ESTVWSISFDGSGDRIVSC-SDDK 205
Query: 170 KVRVFSAYIKDIESAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTS 229
VR++ +Y + + K T C+ L S I+ V +SK + S
Sbjct: 206 TVRIWKSYPPGNQ---EGVVVSGKHTKWKCVCVL--SGYHDRTIYDVHWSKVSGLIATAS 260
Query: 230 HDGSINV 236
D I +
Sbjct: 261 GDDCIRI 267
Score = 128 (50.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 37/131 (28%), Positives = 61/131 (46%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ T++ LA + + LY+ ++ +DWS D L+GH+ V I + + +RIV+CS D
Sbjct: 147 WHPTKEILASCSYDDTIKLYKEDE--DDWSCCDTLEGHESTVWSISFDGSGDRIVSCSDD 204
Query: 77 RNAYVWTQ---NNDD--------KKWKPTLVLLRIN-RAATCVKWSPLENKFAAGSGARL 124
+ +W N + KWK VL + R V WS + A SG
Sbjct: 205 KTVRIWKSYPPGNQEGVVVSGKHTKWKCVCVLSGYHDRTIYDVHWSKVSGLIATASGDDC 264
Query: 125 ISVCYFESEND 135
I + ++ +D
Sbjct: 265 IRIFKEDTNSD 275
Score = 42 (19.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 217 AFSKDGNKLCWTSHDGSI 234
A S D N +CW D +I
Sbjct: 290 AHSMDVNSICWHPKDENI 307
>UNIPROTKB|B4QFZ8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7240 "Drosophila simulans"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CM000362 OrthoDB:EOG45DV4X RefSeq:XP_002081558.1
UniGene:Dsi.12266 ProteinModelPortal:B4QFZ8
EnsemblMetazoa:FBtr0225561 GeneID:6734549 KEGG:dsi:Dsim_GD25651
FlyBase:FBgn0196936 Uniprot:B4QFZ8
Length = 335
Score = 133 (51.9 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 48/222 (21%), Positives = 98/222 (44%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ Q LA + ++ K++ ++ L+GH+ +V + W+ + + TCS D
Sbjct: 67 WSPCGQYLASASFDATTAIWS--KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 77 RNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFES-END 135
++ ++W DD+ ++ VL + V W P ++ A+ S I + E +ND
Sbjct: 125 KSVWIWEVAGDDE-FECAAVLNPHTQDVKRVVWHPTKDVLASASYDNTIKMFAEEPIDND 183
Query: 136 WWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKS 194
W + ST+ +D+ + L+ C S D ++++ AY +A +T +
Sbjct: 184 WDCTATLTSHT-STVWGIDFDADGERLVSC-SDDTTIKIWKAYHPG-NTAGVATP--EQQ 238
Query: 195 TLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
T+ C+ ++ S I+ V++ K + D I +
Sbjct: 239 TVWKCVCTVSGQHSRA--IYDVSWCKLTGLIATACGDDGIRI 278
>FB|FBgn0033972 [details] [associations]
symbol:Ciao1 "Ciao1" species:7227 "Drosophila melanogaster"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE013599 GO:GO:0022008 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 OMA:SWKCVCT
OrthoDB:EOG45DV4X CTD:9391 GeneTree:ENSGT00700000104486
EMBL:AY061388 RefSeq:NP_610996.1 UniGene:Dm.630
ProteinModelPortal:Q7K1Y4 SMR:Q7K1Y4 IntAct:Q7K1Y4 STRING:Q7K1Y4
PaxDb:Q7K1Y4 PRIDE:Q7K1Y4 EnsemblMetazoa:FBtr0087460 GeneID:36655
KEGG:dme:Dmel_CG12797 UCSC:CG12797-RA FlyBase:FBgn0033972
InParanoid:Q7K1Y4 PhylomeDB:Q7K1Y4 GenomeRNAi:36655 NextBio:799718
Bgee:Q7K1Y4 Uniprot:Q7K1Y4
Length = 335
Score = 131 (51.2 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 48/222 (21%), Positives = 98/222 (44%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ Q LA + ++ K++ ++ L+GH+ +V + W+ + + TCS D
Sbjct: 67 WSPCGQYLASASFDATTAIWS--KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 77 RNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFES-END 135
++ ++W DD+ ++ VL + V W P ++ A+ S I + E +ND
Sbjct: 125 KSVWIWEVAGDDE-FECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPIDND 183
Query: 136 WWVAKHIKKPIKSTITCLDWHPNNH-LLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKS 194
W + ST+ +D+ + L+ C S D ++++ AY +A +T +
Sbjct: 184 WDCTATLTSHT-STVWGIDFDADGERLVSC-SDDTTIKIWRAYHPG-NTAGVATP--DQQ 238
Query: 195 TLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
T+ C+ ++ S I+ V++ K + D I +
Sbjct: 239 TVWKCVCTVSGQHSRA--IYDVSWCKLTGLIATACGDDGIRI 278
>UNIPROTKB|B4GDM7 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7234 "Drosophila persimilis"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226
EMBL:CH479181 OrthoDB:EOG45DV4X RefSeq:XP_002015794.1
ProteinModelPortal:B4GDM7 GeneID:6591258 KEGG:dpe:Dper_GL10827
FlyBase:FBgn0148437 Uniprot:B4GDM7
Length = 335
Score = 130 (50.8 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 45/207 (21%), Positives = 96/207 (46%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ Q LA + ++ K++ ++ L+GH+ +V + W+ + + TCS D
Sbjct: 67 WSPCGQYLASASFDATTAIWS--KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 77 RNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESE--N 134
++ ++W DD+ ++ VL + V W P ++ A+ S I + + ES+ +
Sbjct: 125 KSVWIWEVAGDDE-FECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKM-FAESQLDS 182
Query: 135 DWWVAKHIKKPIKSTITCLDWHPN-NHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSK 193
DW + ST+ +D+ + L+ C S D ++++ AY ++ + + K
Sbjct: 183 DWDCTATLSSHT-STVWSIDFDAEGDRLVSC-SDDKTLKIWRAYHPGNDAGIATPD---K 237
Query: 194 STLGNCLVELNNSSSGGGWIHSVAFSK 220
++ C+ L+ S I+ V++ K
Sbjct: 238 QSVWKCVCTLSGQHSRA--IYDVSWCK 262
>UNIPROTKB|Q292E8 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:46245 "Drosophila pseudoobscura
pseudoobscura" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 EMBL:CM000071 GenomeReviews:CM000071_GR OMA:SWKCVCT
OrthoDB:EOG45DV4X HSSP:P63005 RefSeq:XP_001360339.1
ProteinModelPortal:Q292E8 GeneID:4803656 KEGG:dpo:Dpse_GA11817
FlyBase:FBgn0071866 InParanoid:Q292E8 Uniprot:Q292E8
Length = 335
Score = 130 (50.8 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 45/207 (21%), Positives = 96/207 (46%)
Query: 17 WNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSAD 76
W+ Q LA + ++ K++ ++ L+GH+ +V + W+ + + TCS D
Sbjct: 67 WSPCGQYLASASFDATTAIWS--KSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRD 124
Query: 77 RNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESE--N 134
++ ++W DD+ ++ VL + V W P ++ A+ S I + + ES+ +
Sbjct: 125 KSVWIWEVAGDDE-FECAAVLNAHTQDVKRVVWHPTKDILASASYDNTIKM-FAESQLDS 182
Query: 135 DWWVAKHIKKPIKSTITCLDWHPN-NHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSK 193
DW + ST+ +D+ + L+ C S D ++++ AY ++ + + K
Sbjct: 183 DWDCTATLSSHT-STVWSIDFDAEGDRLVSC-SDDKTLKIWRAYHPGNDAGIATPD---K 237
Query: 194 STLGNCLVELNNSSSGGGWIHSVAFSK 220
++ C+ L+ S I+ V++ K
Sbjct: 238 QSVWKCVCTLSGQHSRA--IYDVSWCK 262
>UNIPROTKB|Q7PS24 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7165 "Anopheles gambiae"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:AAAB01008846 RefSeq:XP_310648.3 HSSP:P63005
ProteinModelPortal:Q7PS24 STRING:Q7PS24
EnsemblMetazoa:AGAP000444-RA GeneID:1271794
KEGG:aga:AgaP_AGAP000444 VectorBase:AGAP000444 CTD:1271794
PhylomeDB:Q7PS24 Uniprot:Q7PS24
Length = 341
Score = 126 (49.4 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 45/225 (20%), Positives = 98/225 (43%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSA 75
AW+ LA + V ++ +K + ++ L+GHD +V + W+ + N + TCS
Sbjct: 67 AWSCCGHYLASASFDTTVAVW--DKKSGEFECNATLEGHDNEVKSVTWSRSGNLLATCSR 124
Query: 76 DRNAYVWTQNN---DDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFE- 131
D++ ++W ++ + +++ VL + V W P E+ A+ S I + +
Sbjct: 125 DKSVWIWEIHHAPDQEDEYECVAVLNGHTQDVKKVCWHPQEDLLASASYDNTIRMYRQDL 184
Query: 132 SENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWG 191
++++W + + ++ ST+ + + L S D V+V+ Y D + G
Sbjct: 185 ADSEWEMLEPLESH-SSTVWSISFDATGQRLASCSEDTTVKVWQQYGPDNALGIPCPDRG 243
Query: 192 SKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
T+ C+ L+ S ++ + + K L D ++ +
Sbjct: 244 ---TIWKCVCTLSGYHSRS--VYDIDWCKQTGLLATACGDDTVRI 283
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 217 AFSKDGNKLCW 227
A S+D NK+ W
Sbjct: 305 AHSQDANKVAW 315
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 127 (49.8 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 43/177 (24%), Positives = 81/177 (45%)
Query: 1 MAEVYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKA--ANDWSQLDVLDGHDLKV 58
+ E + I VT W+ +A + V +++ +A A + L L+GH +V
Sbjct: 55 LPEAHKKSIRCVT---WSPCGTYIASASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEV 111
Query: 59 TGIDWAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAA 118
+ W P+ + I TC D++ ++W + +D++ + VL ++ V W P +
Sbjct: 112 KCVAWCPSGHLIATCGRDKSVWLW-EFDDEEDVQCVSVLQPHSQDVKSVAWHPHGEVLVS 170
Query: 119 GSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFS 175
S I+V Y E +DW V + ST+ ++ P+ +L S D V+++S
Sbjct: 171 TSYDNKINV-YREELDDWTVFAQLSGH-DSTVWKAEFSPSGDILASCSDDLCVKLWS 225
Score = 116 (45.9 bits), Expect = 0.00019, P = 0.00019
Identities = 45/228 (19%), Positives = 87/228 (38%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAAND--W-SQLDVLDGHDLKVTGIDWAPNTNRIVT 72
+WN+ L + ++ + L+ ND W S + + H + + W+P I +
Sbjct: 21 SWNHKGSVLISSGEDRVIKLWA---KCNDQLWGSSFSLPEAHKKSIRCVTWSPCGTYIAS 77
Query: 73 CSADRNAYVW--TQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYF 130
S D +W ++ + + + + L CV W P + A + + + F
Sbjct: 78 ASFDGTVTIWKISEAHSAPEMEALVSLEGHTSEVKCVAWCPSGHLIATCGRDKSVWLWEF 137
Query: 131 ESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIE-----SAP 185
+ E D + +P + + WHP+ +L S D K+ V+ + D S
Sbjct: 138 DDEEDVQCVS-VLQPHSQDVKSVAWHPHGEVLVSTSYDNKINVYREELDDWTVFAQLSGH 196
Query: 186 QSTNWGSK-STLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDG 232
ST W ++ S G+ L ++ W K + +C + G
Sbjct: 197 DSTVWKAEFSPSGDILASCSDDLCVKLWSWEGVCGKSSSWMCIATLSG 244
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 124 (48.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 52/234 (22%), Positives = 96/234 (41%)
Query: 4 VYSFGINPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDG-HDLKVTGID 62
V+S NPV++HA + LA + V +++ + W+ VL+ H V
Sbjct: 23 VWSVAWNPVSSHA-DGVSPILASCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCA 81
Query: 63 WAPNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGA 122
W+P+ + T S D +W N +++ L V W+ + A S
Sbjct: 82 WSPSGQLLATASFDGTTGIW--KNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRD 139
Query: 123 RLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIE 182
+ + + N++ A + + + + WHP +L S D ++V+ + +D +
Sbjct: 140 KSVWIWEVLEGNEYDCAAVLTGHTQD-VKMVQWHPTMDVLFSCSYDNTIKVW--WSEDDD 196
Query: 183 SAPQSTNWGSKSTLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
Q TLG E NN S W S++F+ G+K+ S D ++ +
Sbjct: 197 GEYQCVQ-----TLG----ESNNGHSSTVW--SISFNAAGDKMVTCSDDLTLKI 239
>UNIPROTKB|Q3ZCC9 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9913 "Bos
taurus" [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0012507 GO:GO:0000776 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0051028 GO:GO:0031080 EMBL:BC102514
IPI:IPI00691005 RefSeq:NP_001069033.1 UniGene:Bt.62595
ProteinModelPortal:Q3ZCC9 SMR:Q3ZCC9 STRING:Q3ZCC9 PRIDE:Q3ZCC9
Ensembl:ENSBTAT00000023702 GeneID:512530 KEGG:bta:512530 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 InParanoid:Q3ZCC9 KO:K14004 OMA:IKLWKEE
OrthoDB:EOG40P471 NextBio:20870435 Uniprot:Q3ZCC9
Length = 322
Score = 123 (48.4 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 34/122 (27%), Positives = 55/122 (45%)
Query: 39 EKAANDWSQLDVLDGHDLKVTGIDWAPN----TNRIVTCSADRNAYVWTQNN-DDKKWKP 93
E+ W + L+ H V + WAP+ T+ I +CS D +VWT ++ W P
Sbjct: 196 EEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSP 255
Query: 94 TLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVA-KHIKK---PIKST 149
L L + N V WS N A G +++ + ES + WV + K P+ ++
Sbjct: 256 KL-LHKFNDVVWHVSWSITANILAVSGGDNKVTL-WKESVDGQWVCISDVNKGQGPVSTS 313
Query: 150 IT 151
+T
Sbjct: 314 VT 315
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 123 (48.4 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 41/191 (21%), Positives = 82/191 (42%)
Query: 38 YEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWT-QNNDDKKWKPTLV 96
+E A D + VL GH+ +V + W + + + TC D++ ++W Q +D ++ V
Sbjct: 75 WENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAV 134
Query: 97 LLRINRAATCVKWSPLENKFAAGSGARLISV-CYFESENDW---WVAKHIKKPIKSTITC 152
L + V W P + + S I + C + + D+ + ST+
Sbjct: 135 LTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWS 194
Query: 153 LDWHP-NNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNCLVELNNSSSGGG 211
+ ++ + ++ C S D V+++ I ++S W TL ++ +
Sbjct: 195 ISFNAAGDKMVTC-SDDLAVKIWKTDISRMQSGEGYVPWTHVCTLSG----FHDRT---- 245
Query: 212 WIHSVAFSKDG 222
I+SV +S+DG
Sbjct: 246 -IYSVHWSRDG 255
>UNIPROTKB|A4R7U3 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:242507 "Magnaporthe oryzae 70-15"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CM001234 OrthoDB:EOG4CVKH5 RefSeq:XP_003716845.1
ProteinModelPortal:A4R7U3 STRING:A4R7U3 GeneID:2676736
KEGG:mgr:MGG_03150 Uniprot:A4R7U3
Length = 446
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 31/127 (24%), Positives = 55/127 (43%)
Query: 43 NDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQ---NNDDKKWKPTLVLLR 99
+DW VL+GH+ ++ ++P+ + TCS D++ ++W N D +W+ VL
Sbjct: 133 DDWEFTLVLEGHENEIKSAAFSPSGQYLATCSRDKSIWIWEDVGANEGDDEWETVAVLTE 192
Query: 100 INRAATCVKWSP--LENKFAAGSGARLISVCYFESENDW-------WVAKHIKKPIKSTI 150
+ CV W P ++ S L S Y ++ W W + + ST+
Sbjct: 193 HDGDVKCVAWCPDVPGRNISSYSPDVLASASYDDTIRIWREDGDGEWACVAVLEGHSSTV 252
Query: 151 TCLDWHP 157
+ W P
Sbjct: 253 WGVQWEP 259
>MGI|MGI:2442115 [details] [associations]
symbol:Wdr59 "WD repeat domain 59" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
MGI:MGI:2442115 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00650000093352
OMA:TGGWNIA CTD:79726 HOVERGEN:HBG092820 EMBL:EF011622
EMBL:AK173301 EMBL:AK030644 EMBL:AK040807 EMBL:AK052262
EMBL:AK136303 EMBL:AK170910 EMBL:BC066082 IPI:IPI00263940
IPI:IPI00469939 IPI:IPI00955111 RefSeq:NP_001164213.1
RefSeq:NP_001164214.1 RefSeq:NP_795897.2 UniGene:Mm.247294
ProteinModelPortal:Q8C0M0 SMR:Q8C0M0 PhosphoSite:Q8C0M0
PRIDE:Q8C0M0 Ensembl:ENSMUST00000038193 GeneID:319481
KEGG:mmu:319481 UCSC:uc009nmi.2 UCSC:uc009nmj.2 NextBio:394820
Bgee:Q8C0M0 CleanEx:MM_WDR59 Genevestigator:Q8C0M0 Uniprot:Q8C0M0
Length = 992
Score = 129 (50.5 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 39/146 (26%), Positives = 69/146 (47%)
Query: 29 NNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAP-NTNRIVTCSADRNAYVWTQNND 87
+NQ V LY+++ + + L GH ++ +DWA + +VT S D Y+W D
Sbjct: 81 SNQRVDLYKWKDGSGEVGT--TLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIW-DIKD 137
Query: 88 DKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIK 147
+K PT+ L + A+ VKW+ + A S + + ++ +++ +
Sbjct: 138 TRK--PTVALSAV-AGASQVKWNKKNANYLATSHDGDVRI--WDKRKPSTAVEYLAAHL- 191
Query: 148 STITCLDWHPNN-HLLGCGSTDFKVR 172
S I LDWHP++ H+ S D V+
Sbjct: 192 SKIHGLDWHPDSEHIFATSSQDNSVK 217
>WB|WBGene00012479 [details] [associations]
symbol:Y18D10A.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0000003 GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT
GeneTree:ENSGT00700000104486 EMBL:AL034393 PIR:T26531
RefSeq:NP_493247.2 ProteinModelPortal:Q9XW12 SMR:Q9XW12
IntAct:Q9XW12 STRING:Q9XW12 PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9
GeneID:173152 KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 123 (48.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 42/181 (23%), Positives = 82/181 (45%)
Query: 12 VTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIV 71
V + A++N + L + V +YQ E ++++++ L+GH+ +V ++ + +
Sbjct: 70 VRSVAFSNDGKCLVSASFDASVVVYQQEDG--EFAEVNKLEGHESEVKCAVFSKSDEFLA 127
Query: 72 TCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFE 131
TCS D++ + W Q ++D+ + + +L + V W P E+ + S I F+
Sbjct: 128 TCSRDKSVWFW-QQDEDEDFSVSSILQPHTQDVKQVAWHPTEDLLVSCSYDSSIRFYRFD 186
Query: 132 SENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWG 191
E DW + I T+ + + H L D +++F +SA Q T W
Sbjct: 187 GE-DWVTQQKIDGCHVGTVWSIAFDTEGHRLVTVGEDHCIQLFVRENIGSKSADQDT-WK 244
Query: 192 S 192
S
Sbjct: 245 S 245
>UNIPROTKB|Q9XW12 [details] [associations]
symbol:Y18D10A.9 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1 homolog" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0016226
HOGENOM:HOG000208901 OMA:SWKCVCT GeneTree:ENSGT00700000104486
EMBL:AL034393 PIR:T26531 RefSeq:NP_493247.2
ProteinModelPortal:Q9XW12 SMR:Q9XW12 IntAct:Q9XW12 STRING:Q9XW12
PaxDb:Q9XW12 EnsemblMetazoa:Y18D10A.9 GeneID:173152
KEGG:cel:CELE_Y18D10A.9 UCSC:Y18D10A.9 CTD:173152
WormBase:Y18D10A.9 InParanoid:Q9XW12 NextBio:878489 Uniprot:Q9XW12
Length = 337
Score = 123 (48.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 42/181 (23%), Positives = 82/181 (45%)
Query: 12 VTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIV 71
V + A++N + L + V +YQ E ++++++ L+GH+ +V ++ + +
Sbjct: 70 VRSVAFSNDGKCLVSASFDASVVVYQQEDG--EFAEVNKLEGHESEVKCAVFSKSDEFLA 127
Query: 72 TCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFE 131
TCS D++ + W Q ++D+ + + +L + V W P E+ + S I F+
Sbjct: 128 TCSRDKSVWFW-QQDEDEDFSVSSILQPHTQDVKQVAWHPTEDLLVSCSYDSSIRFYRFD 186
Query: 132 SENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWG 191
E DW + I T+ + + H L D +++F +SA Q T W
Sbjct: 187 GE-DWVTQQKIDGCHVGTVWSIAFDTEGHRLVTVGEDHCIQLFVRENIGSKSADQDT-WK 244
Query: 192 S 192
S
Sbjct: 245 S 245
>DICTYBASE|DDB_G0277257 [details] [associations]
symbol:DDB_G0277257 "Nucleoporin SEH1" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277257 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000019 KO:K14299 RefSeq:XP_642765.1
ProteinModelPortal:Q86K39 STRING:Q86K39 EnsemblProtists:DDB0169145
GeneID:8620954 KEGG:ddi:DDB_G0277257 InParanoid:Q86K39 OMA:TELEDHI
Uniprot:Q86K39
Length = 467
Score = 125 (49.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 45/207 (21%), Positives = 89/207 (42%)
Query: 22 QQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWA-PNTNRIV-TCSADRNA 79
++LA ++Q++ ++ + W H V + WA P +++ +CS DR
Sbjct: 25 KRLATCSSDQKIKVWD-QNDNQKWELSAEWKAHSGSVWKLAWAHPEYGQVIASCSFDRTV 83
Query: 80 YVWTQNNDDK---KWKPTLVLLRINRAATCVKWSP----LENKFAAGSG-ARLISVCYFE 131
+W ++ D+K KW+ L+ + T +K++P L + G R+
Sbjct: 84 CIWEESEDEKGQKKWQLKAHLVDSRDSVTDIKFAPKSFGLRLATCSSDGYIRIYEAMDIM 143
Query: 132 SENDWWVAKHIKKPIKSTITCLDWHPNNH---LLGCGSTDFKVRVFSAYIKDIESAPQST 188
+ + W + + + K T C+ W+P+++ ++ GS + YIK E + +
Sbjct: 144 NLSQWTIVEEFESQ-KGTSNCISWNPSSYDKPMIAVGSNE-------PYIKIWEYSETAR 195
Query: 189 NWGSKSTLG----NCLVELNNSSSGGG 211
W TL + +N +SGGG
Sbjct: 196 KWLQIDTLTAYPIGSTISSSNLNSGGG 222
>UNIPROTKB|Q6PJI9 [details] [associations]
symbol:WDR59 "WD repeat-containing protein 59" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006575 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50908
SMART:SM00320 SMART:SM00591 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:3.10.110.10 InterPro:IPR016135 OMA:TGGWNIA EMBL:AK022332
EMBL:AK091316 EMBL:AF370390 EMBL:BC004519 EMBL:BC014887
EMBL:AB067510 IPI:IPI00012257 IPI:IPI00242841 IPI:IPI00644331
IPI:IPI00646489 RefSeq:NP_085058.3 UniGene:Hs.280951
ProteinModelPortal:Q6PJI9 SMR:Q6PJI9 IntAct:Q6PJI9 STRING:Q6PJI9
PhosphoSite:Q6PJI9 DMDM:134035358 PaxDb:Q6PJI9 PRIDE:Q6PJI9
Ensembl:ENST00000262144 GeneID:79726 KEGG:hsa:79726 UCSC:uc002fdf.1
UCSC:uc002fdg.1 CTD:79726 GeneCards:GC16M074908 H-InvDB:HIX0013239
HGNC:HGNC:25706 HPA:HPA041084 neXtProt:NX_Q6PJI9
PharmGKB:PA142670593 HOGENOM:HOG000004834 HOVERGEN:HBG092820
InParanoid:Q6PJI9 OrthoDB:EOG4CNQQ9 GenomeRNAi:79726 NextBio:69094
Bgee:Q6PJI9 CleanEx:HS_WDR59 Genevestigator:Q6PJI9 Uniprot:Q6PJI9
Length = 974
Score = 128 (50.1 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 40/146 (27%), Positives = 69/146 (47%)
Query: 29 NNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAP-NTNRIVTCSADRNAYVWTQNND 87
+NQ V LY+++ + + L GH ++ +DWA + +VT S D Y+W D
Sbjct: 81 SNQRVDLYKWKDGSGEVGT--TLQGHTRVISDLDWAVFEPDLLVTSSVDTYIYIW-DIKD 137
Query: 88 DKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIK 147
+K PT+ L + A+ VKW+ A S + + ++ +++ +
Sbjct: 138 TRK--PTVALSAV-AGASQVKWNKKNANCLATSHDGDVRI--WDKRKPSTAVEYLAAHL- 191
Query: 148 STITCLDWHPNN-HLLGCGSTDFKVR 172
S I LDWHP++ H+L S D V+
Sbjct: 192 SKIHGLDWHPDSEHILATSSQDNSVK 217
>UNIPROTKB|B0XAF3 [details] [associations]
symbol:Ciao1 "Probable cytosolic iron-sulfur protein
assembly protein Ciao1" species:7176 "Culex quinquefasciatus"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT OrthoDB:EOG45DV4X
EMBL:DS232580 RefSeq:XP_001866625.1 UniGene:Cpi.8879
ProteinModelPortal:B0XAF3 STRING:B0XAF3
EnsemblMetazoa:CPIJ016096-RA GeneID:6049938
KEGG:cqu:CpipJ_CPIJ016096 VectorBase:CPIJ016096 PhylomeDB:B0XAF3
Uniprot:B0XAF3
Length = 338
Score = 122 (48.0 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 44/223 (19%), Positives = 98/223 (43%)
Query: 16 AWNNTRQQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSA 75
AW+ + LA + V ++ ++ + ++ L+GH+ +V + W+ + + TCS
Sbjct: 67 AWSPCGRFLASASFDATVAIW--DRRSGEFECNATLEGHENEVKSVSWSKSGALLATCSR 124
Query: 76 DRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFE--SE 133
D++ ++W +D+ ++ VL ++ V+W P E+ A+ S I + Y E ++
Sbjct: 125 DKSVWIWEVAQEDE-YECAAVLNTHSQDVKKVEWHPNEDVLASASYDNTIQL-YREDLAD 182
Query: 134 NDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGSTDFKVRVFSAYIKDIESAPQSTNWGSK 193
+DW + ST+ + + + L S D VR++ Y E + K
Sbjct: 183 SDWSSFDTLASH-DSTVWSIAFDASGSRLASCSDDQTVRIWQEYKPGNEFGVACPD--GK 239
Query: 194 STLGNCLVELNNSSSGGGWIHSVAFSKDGNKLCWTSHDGSINV 236
+ + C+ L+ S ++ +++ K + D + +
Sbjct: 240 TPVWKCVCTLSGFHSRA--VYDISWCKKTGLIATACGDDMVRI 280
>UNIPROTKB|F1PDM3 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AAEX03012077 RefSeq:XP_850437.1 ProteinModelPortal:F1PDM3
Ensembl:ENSCAFT00000008242 GeneID:607653 KEGG:cfa:607653
NextBio:20893365 Uniprot:F1PDM3
Length = 322
Score = 119 (46.9 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 30/105 (28%), Positives = 46/105 (43%)
Query: 39 EKAANDWSQLDVLDGHDLKVTGIDWAPN----TNRIVTCSADRNAYVWT-QNNDDKKWKP 93
E+ W + L+ H V + WAP+ T+ I +CS D ++WT + W P
Sbjct: 196 EEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDTSGNTWSP 255
Query: 94 TLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWV 138
L L + N V WS N A G +++ + ES + WV
Sbjct: 256 KL-LHKFNDVVWHVSWSITANILAVSGGDNKVTL-WKESVDGQWV 298
Score = 111 (44.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 45/168 (26%), Positives = 66/168 (39%)
Query: 51 LDGHDLKVTGIDWA-PNTNRIV-TCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVK 108
L GH+ V + WA P I+ +CS DR +W + N W+ T + + V
Sbjct: 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT--WEKTHEHTGHDSSVNSVC 110
Query: 109 WSPLENKF--AAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGS 166
W+P + A GS IS+ + E W +KK I N H +GC +
Sbjct: 111 WAPHDYGLILACGSSDGAISLLTYTGEGQW----EVKK-----IN------NAHTIGCNA 155
Query: 167 TDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNC--LVELNNSSSGGGW 212
+ V + D S Q N+ K G C L++L G W
Sbjct: 156 VSWAPAVVPGSLIDQPSG-QKPNYIKKFASGGCDNLIKLWKEEEDGQW 202
Score = 38 (18.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 219 SKDGNKLCWTSHDGSIN 235
S+DG WT D S N
Sbjct: 235 SQDGRVFIWTCDDTSGN 251
>POMBASE|SPBC215.15 [details] [associations]
symbol:sec13 "COPII-coated vesicle component Sec13"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006999
"nuclear pore organization" evidence=ISO] [GO:0030127 "COPII
vesicle coat" evidence=ISO] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0071937 "barrier septum assembly involved in cell
cycle cytokinesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC215.15 GO:GO:0005829
GO:GO:0005886 GO:GO:0006886 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0005789 EMBL:CU329671 eggNOG:COG2319 GO:GO:0005643
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0051028 GO:GO:0071937
GO:GO:0030127 GO:GO:0006999 HOGENOM:HOG000216895 KO:K14004
OMA:IKLWKEE OrthoDB:EOG4QNR53 PIR:T39905 RefSeq:NP_596692.1
ProteinModelPortal:O94319 STRING:O94319 PRIDE:O94319
EnsemblFungi:SPBC215.15.1 GeneID:2540716 KEGG:spo:SPBC215.15
NextBio:20801838 Uniprot:O94319
Length = 297
Score = 118 (46.6 bits), Expect = 8.0e-05, P = 8.0e-05
Identities = 31/119 (26%), Positives = 52/119 (43%)
Query: 22 QQLAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNTNR----IVTCSADR 77
++LA + V ++ ++ N+W D L GH + WAP+ + + S D+
Sbjct: 172 KKLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWTRDVAWAPSVGLTKTYLASASQDK 231
Query: 78 NAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDW 136
N ++WT+ D K L + A V WS N A G + + + ES+N W
Sbjct: 232 NVFIWTKEGDGPWQKTPLTEEKFPDIAWRVSWSLSGNILAVSCGDNKVYL-FKESQNKW 289
>UNIPROTKB|P55735 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9606 "Homo
sapiens" [GO:0051028 "mRNA transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=NAS]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=TAS] [GO:0012507 "ER to Golgi transport vesicle
membrane" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] Reactome:REACT_11123 Reactome:REACT_17015
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0006886 GO:GO:0012507 GO:GO:0002474 Reactome:REACT_21300
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886
GO:GO:0005789 eggNOG:COG2319 GO:GO:0043687 GO:GO:0018279
GO:GO:0051028 GO:GO:0000236 GO:GO:0048208 GO:GO:0031080 PDB:3BG0
PDB:3BG1 PDBsum:3BG0 PDBsum:3BG1 CTD:6396 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:L09260
EMBL:BC002634 EMBL:BC006167 EMBL:BC091506 IPI:IPI00479141
RefSeq:NP_001129704.1 RefSeq:NP_899195.1 UniGene:Hs.166924
ProteinModelPortal:P55735 SMR:P55735 DIP:DIP-39091N IntAct:P55735
MINT:MINT-1154053 STRING:P55735 PhosphoSite:P55735 DMDM:50403748
PaxDb:P55735 PRIDE:P55735 DNASU:6396 Ensembl:ENST00000337354
Ensembl:ENST00000350697 GeneID:6396 KEGG:hsa:6396 UCSC:uc003bvl.3
GeneCards:GC03M010335 HGNC:HGNC:10697 HPA:HPA035292 MIM:600152
neXtProt:NX_P55735 PharmGKB:PA35620 InParanoid:P55735
EvolutionaryTrace:P55735 GenomeRNAi:6396 NextBio:24846
ArrayExpress:P55735 Bgee:P55735 CleanEx:HS_SEC13
Genevestigator:P55735 GermOnline:ENSG00000157020 Uniprot:P55735
Length = 322
Score = 118 (46.6 bits), Expect = 9.4e-05, P = 9.4e-05
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 39 EKAANDWSQLDVLDGHDLKVTGIDWAPN----TNRIVTCSADRNAYVWTQNN-DDKKWKP 93
E+ W + L+ H V + WAP+ T+ I +CS D ++WT ++ W P
Sbjct: 196 EEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSP 255
Query: 94 TLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWV 138
L L + N V WS N A G +++ + ES + WV
Sbjct: 256 KL-LHKFNDVVWHVSWSITANILAVSGGDNKVTL-WKESVDGQWV 298
Score = 104 (41.7 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 43/168 (25%), Positives = 66/168 (39%)
Query: 51 LDGHDLKVTGIDWA-PNTNRIV-TCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVK 108
L GH+ V + WA P I+ +CS DR +W + N W+ + + + V
Sbjct: 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT--WEKSHEHAGHDSSVNSVC 110
Query: 109 WSPLENKF--AAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGS 166
W+P + A GS IS+ + E W +KK I N H +GC +
Sbjct: 111 WAPHDYGLILACGSSDGAISLLTYTGEGQW----EVKK-----IN------NAHTIGCNA 155
Query: 167 TDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNC--LVELNNSSSGGGW 212
+ V + D S Q N+ + G C L++L G W
Sbjct: 156 VSWAPAVVPGSLIDHPSG-QKPNYIKRFASGGCDNLIKLWKEEEDGQW 202
Score = 42 (19.8 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 219 SKDGNKLCWTSHDGSIN 235
S+DG WT D S N
Sbjct: 235 SQDGRVFIWTCDDASSN 251
>MGI|MGI:99832 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISO] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:99832 GO:GO:0012507 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OMA:IKLWKEE OrthoDB:EOG40P471
EMBL:AK003354 EMBL:AK009755 EMBL:BC002128 IPI:IPI00133920
RefSeq:NP_077168.2 UniGene:Mm.29296 ProteinModelPortal:Q9D1M0
SMR:Q9D1M0 IntAct:Q9D1M0 STRING:Q9D1M0 PhosphoSite:Q9D1M0
REPRODUCTION-2DPAGE:Q9D1M0 PaxDb:Q9D1M0 PRIDE:Q9D1M0 DNASU:110379
Ensembl:ENSMUST00000032440 GeneID:110379 KEGG:mmu:110379
UCSC:uc009dhm.1 InParanoid:Q9D1M0 NextBio:363887 Bgee:Q9D1M0
CleanEx:MM_SEC13 Genevestigator:Q9D1M0
GermOnline:ENSMUSG00000030298 Uniprot:Q9D1M0
Length = 322
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 39 EKAANDWSQLDVLDGHDLKVTGIDWAPN----TNRIVTCSADRNAYVWTQNN-DDKKWKP 93
E+ W + L+ H V + WAP+ T+ I +CS D ++WT ++ W P
Sbjct: 196 EEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSP 255
Query: 94 TLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWV 138
L L + N V WS N A G +++ + ES + WV
Sbjct: 256 KL-LHKFNDVVWHVSWSITANILAVSGGDNKVTL-WKESVDGQWV 298
Score = 110 (43.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 45/168 (26%), Positives = 66/168 (39%)
Query: 51 LDGHDLKVTGIDWA-PNTNRIV-TCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVK 108
L GH+ V + WA P I+ +CS DR +W + N W+ T + + V
Sbjct: 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT--WEKTHEHSGHDSSVNSVC 110
Query: 109 WSPLENKF--AAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGS 166
W+P + A GS IS+ + E W +KK I N H +GC +
Sbjct: 111 WAPHDYGLILACGSSDGAISLLTYTGEGQW----EVKK-----IN------NAHTIGCNA 155
Query: 167 TDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNC--LVELNNSSSGGGW 212
+ V + D S Q N+ K G C L++L G W
Sbjct: 156 VSWAPAVVPGSLIDQPSG-QKPNYIKKFASGGCDNLIKLWREEEDGQW 202
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 219 SKDGNKLCWTSHDGSINV 236
S+DG WT D S N+
Sbjct: 235 SQDGRVFIWTCDDASGNM 252
>RGD|1359555 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359555 GO:GO:0012507 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031 eggNOG:COG2319
GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:BC084705
IPI:IPI00364566 RefSeq:NP_001006979.1 UniGene:Rn.1553
ProteinModelPortal:Q5XFW8 SMR:Q5XFW8 STRING:Q5XFW8 PRIDE:Q5XFW8
Ensembl:ENSRNOT00000014377 GeneID:297522 KEGG:rno:297522
UCSC:RGD:1359555 InParanoid:Q5XFW8 NextBio:642376
Genevestigator:Q5XFW8 Uniprot:Q5XFW8
Length = 322
Score = 117 (46.2 bits), Expect = 0.00012, P = 0.00012
Identities = 30/105 (28%), Positives = 47/105 (44%)
Query: 39 EKAANDWSQLDVLDGHDLKVTGIDWAPN----TNRIVTCSADRNAYVWTQNN-DDKKWKP 93
E+ W + L+ H V + WAP+ T+ I +CS D ++WT ++ W P
Sbjct: 196 EEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSP 255
Query: 94 TLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWV 138
L L + N V WS N A G +++ + ES + WV
Sbjct: 256 KL-LHKFNDVVWHVSWSITANILAVSGGDNKVTL-WKESVDGQWV 298
Score = 110 (43.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 45/168 (26%), Positives = 66/168 (39%)
Query: 51 LDGHDLKVTGIDWA-PNTNRIV-TCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVK 108
L GH+ V + WA P I+ +CS DR +W + N W+ T + + V
Sbjct: 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGT--WEKTHEHSGHDSSVNSVC 110
Query: 109 WSPLENKF--AAGSGARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHPNNHLLGCGS 166
W+P + A GS IS+ + E W +KK I N H +GC +
Sbjct: 111 WAPHDYGLILACGSSDGAISLLTYTGEGQW----EVKK-----IN------NAHTIGCNA 155
Query: 167 TDFKVRVFSAYIKDIESAPQSTNWGSKSTLGNC--LVELNNSSSGGGW 212
+ V + D S Q N+ K G C L++L G W
Sbjct: 156 VSWAPAVVPGSLIDQPSG-QKPNYIKKFASGGCDNLIKLWREEEDGQW 202
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 219 SKDGNKLCWTSHDGSINV 236
S+DG WT D S N+
Sbjct: 235 SQDGRVFIWTCDDASGNM 252
>CGD|CAL0000383 [details] [associations]
symbol:orf19.4293 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0002098 "tRNA
wobble uridine modification" evidence=IEA] [GO:0000055 "ribosomal
large subunit export from nucleus" evidence=IEA] [GO:0016226
"iron-sulfur cluster assembly" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000383 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000021 EMBL:AACQ01000022 RefSeq:XP_720601.1
RefSeq:XP_720729.1 ProteinModelPortal:Q5AG86 STRING:Q5AG86
GeneID:3637653 GeneID:3637738 KEGG:cal:CaO19.11769
KEGG:cal:CaO19.4293 Uniprot:Q5AG86
Length = 383
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 25/111 (22%), Positives = 53/111 (47%)
Query: 43 NDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDD-KKWKPTLVLLRIN 101
N+W+ + +++GH+ +V +DW + +CS D++ ++W + + ++++ VL +
Sbjct: 125 NEWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLNDHS 184
Query: 102 RAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITC 152
+ V W P N A+ S I + + D W I + T+ C
Sbjct: 185 QDVKNVSWHPSMNILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVWC 235
>UNIPROTKB|Q5AG86 [details] [associations]
symbol:CIA1 "Probable cytosolic iron-sulfur protein
assembly protein 1" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000383 GO:GO:0005634
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AACQ01000021 EMBL:AACQ01000022 RefSeq:XP_720601.1
RefSeq:XP_720729.1 ProteinModelPortal:Q5AG86 STRING:Q5AG86
GeneID:3637653 GeneID:3637738 KEGG:cal:CaO19.11769
KEGG:cal:CaO19.4293 Uniprot:Q5AG86
Length = 383
Score = 118 (46.6 bits), Expect = 0.00013, P = 0.00013
Identities = 25/111 (22%), Positives = 53/111 (47%)
Query: 43 NDWSQLDVLDGHDLKVTGIDWAPNTNRIVTCSADRNAYVWTQNNDD-KKWKPTLVLLRIN 101
N+W+ + +++GH+ +V +DW + +CS D++ ++W + + ++++ VL +
Sbjct: 125 NEWNLMAIIEGHENEVKAVDWNFQGQYLASCSRDKSVWIWETDPETLEEFECVAVLNDHS 184
Query: 102 RAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIKKPIKSTITC 152
+ V W P N A+ S I + + D W I + T+ C
Sbjct: 185 QDVKNVSWHPSMNILASSSYDDTIRIYQQDIAGDEWSCVGILNGHEGTVWC 235
>SGD|S000004198 [details] [associations]
symbol:SEC13 "Structural component of 3 distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP] [GO:0031080 "nuclear pore
outer ring" evidence=IDA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IMP] [GO:0030127 "COPII vesicle coat"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=IDA;IMP] [GO:0005773 "vacuole" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0043547 "positive regulation of GTPase activity" evidence=IDA]
[GO:0035859 "Seh1-associated complex" evidence=IDA] [GO:0031081
"nuclear pore distribution" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004198 GO:GO:0005774
GO:GO:0045893 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0043547 GO:GO:0005198 GO:GO:0015031 eggNOG:COG2319
EMBL:BK006945 GO:GO:0030433 GO:GO:0051028 EMBL:U14913 GO:GO:0030127
GO:GO:0031080 GO:GO:0031081 GO:GO:0035859 PDB:3IKO PDBsum:3IKO
PDB:3JRO PDBsum:3JRO GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE OrthoDB:EOG4QNR53
EMBL:L05929 PIR:A45442 RefSeq:NP_013309.1 PDB:2PM6 PDB:2PM7
PDB:2PM9 PDB:3JRP PDB:3MZK PDB:3MZL PDBsum:2PM6 PDBsum:2PM7
PDBsum:2PM9 PDBsum:3JRP PDBsum:3MZK PDBsum:3MZL
ProteinModelPortal:Q04491 SMR:Q04491 DIP:DIP-1826N IntAct:Q04491
MINT:MINT-402427 STRING:Q04491 PaxDb:Q04491 PeptideAtlas:Q04491
EnsemblFungi:YLR208W GeneID:850905 KEGG:sce:YLR208W CYGD:YLR208w
EvolutionaryTrace:Q04491 NextBio:967299 Genevestigator:Q04491
GermOnline:YLR208W GO:GO:0090114 Uniprot:Q04491
Length = 297
Score = 115 (45.5 bits), Expect = 0.00018, P = 0.00018
Identities = 30/125 (24%), Positives = 51/125 (40%)
Query: 18 NNTRQQLAFTPNNQE--VHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNT---NRIVT 72
N T++ F + V +++Y A + L+GH V + W+P + + +
Sbjct: 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 224
Query: 73 CSADRNAYVWTQNNDDKKWKPTLVLL-RINRAATCVKWSPLENKFAAGSGARLISVCYFE 131
S DR +WTQ+N+ WK TL+ + WS N A G +++
Sbjct: 225 VSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284
Query: 132 SENDW 136
E W
Sbjct: 285 LEGKW 289
>FB|FBgn0024509 [details] [associations]
symbol:Sec13 "Sec13 ortholog (S. cerevisiae)" species:7227
"Drosophila melanogaster" [GO:0006900 "membrane budding"
evidence=ISS] [GO:0008363 "larval chitin-based cuticle development"
evidence=IMP] [GO:0035293 "chitin-based larval cuticle pattern
formation" evidence=IMP] [GO:0010629 "negative regulation of gene
expression" evidence=IDA] [GO:0031080 "nuclear pore outer ring"
evidence=ISS] [GO:0007184 "SMAD protein import into nucleus"
evidence=IMP] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0010629 GO:GO:0007184 GO:GO:0035293 EMBL:AF160909
ProteinModelPortal:Q7KLW8 STRING:Q7KLW8 PaxDb:Q7KLW8 PRIDE:Q7KLW8
FlyBase:FBgn0024509 InParanoid:Q7KLW8 OrthoDB:EOG46T1H2
ArrayExpress:Q7KLW8 Bgee:Q7KLW8 Uniprot:Q7KLW8
Length = 386
Score = 116 (45.9 bits), Expect = 0.00022, P = 0.00022
Identities = 30/99 (30%), Positives = 45/99 (45%)
Query: 43 ND-WSQLDVLDGHDLKVTGIDWAPNT----NRIVTCSADRNAYVWTQNNDDKKWKPTLVL 97
ND W + L+ H V + WAP+ ++I T S DR+ VW+ N D +W T VL
Sbjct: 229 NDRWVEEHRLEAHSDWVRDVAWAPSIGLPRSQIATASQDRHVIVWSSNADLSEWTST-VL 287
Query: 98 LRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDW 136
+ A + WS N A G +++ +E W
Sbjct: 288 HTFDDAVWSISWSTTGNILAVTGGDNNVTLWKENTEGQW 326
>UNIPROTKB|E1BVC4 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AADN02014522 EMBL:AADN02014521 IPI:IPI00586706
RefSeq:XP_414450.3 UniGene:Gga.12581 ProteinModelPortal:E1BVC4
Ensembl:ENSGALT00000013715 GeneID:416119 KEGG:gga:416119
Uniprot:E1BVC4
Length = 320
Score = 112 (44.5 bits), Expect = 0.00046, P = 0.00046
Identities = 28/105 (26%), Positives = 47/105 (44%)
Query: 38 YEKAANDWSQLDVLDGHDLKVTGIDWAPN----TNRIVTCSADRNAYVWTQNN-DDKKWK 92
+++ W + L+ H V + WAP+ T+ I +CS D ++WT ++ W
Sbjct: 194 WKEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGSSWS 253
Query: 93 PTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWW 137
P L L + N V WS N A G +++ + ES + W
Sbjct: 254 PKL-LHKFNDVVWHVSWSITANILAVSGGDNKVTL-WKESVDGLW 296
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 114 (45.2 bits), Expect = 0.00063, P = 0.00063
Identities = 55/237 (23%), Positives = 95/237 (40%)
Query: 9 INPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWS-----QLDVLDGHDLKVTGIDW 63
+N ++ HA N R +AF+PN+ + + A W+ + L GH +V DW
Sbjct: 211 VNNISAHA-NGVRD-IAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADW 268
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSP--LENKFAAGSG 121
PN IV+ S D +W D + L ++ P A+ S
Sbjct: 269 HPNLGLIVSGSKDNLVKLW----DPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSR 324
Query: 122 ARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHP-NNHLLGCGSTDFKVRVF--SAYI 178
R + + D V + + + ++C+ WHP + ++ + + + F +YI
Sbjct: 325 DRSCRIFDLRTMKDMLVIRDSE----TDLSCVAWHPIHASMVTTAAYNGSISNFLLDSYI 380
Query: 179 KDI-ESAPQSTNWGSK-STLGNCLVELNNSS--SGGGWIHSVAFSKDGNKLCWTSHD 231
D ES P+ +N S ST N ++ + IH+V + G+ LC D
Sbjct: 381 PDSNESVPKRSNNNSNLSTNTNNTIDAVQKIPYAHEKAIHAVEYHPLGHLLCTAGSD 437
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 114 (45.2 bits), Expect = 0.00063, P = 0.00063
Identities = 55/237 (23%), Positives = 95/237 (40%)
Query: 9 INPVTTHAWNNTRQQLAFTPNNQEVHLYQYEKAANDWS-----QLDVLDGHDLKVTGIDW 63
+N ++ HA N R +AF+PN+ + + A W+ + L GH +V DW
Sbjct: 211 VNNISAHA-NGVRD-IAFSPNDSKFLTCGDDSAIKIWNFNNGKEERTLSGHHWEVKSADW 268
Query: 64 APNTNRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSP--LENKFAAGSG 121
PN IV+ S D +W D + L ++ P A+ S
Sbjct: 269 HPNLGLIVSGSKDNLVKLW----DPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSR 324
Query: 122 ARLISVCYFESENDWWVAKHIKKPIKSTITCLDWHP-NNHLLGCGSTDFKVRVF--SAYI 178
R + + D V + + + ++C+ WHP + ++ + + + F +YI
Sbjct: 325 DRSCRIFDLRTMKDMLVIRDSE----TDLSCVAWHPIHASMVTTAAYNGSISNFLLDSYI 380
Query: 179 KDI-ESAPQSTNWGSK-STLGNCLVELNNSS--SGGGWIHSVAFSKDGNKLCWTSHD 231
D ES P+ +N S ST N ++ + IH+V + G+ LC D
Sbjct: 381 PDSNESVPKRSNNNSNLSTNTNNTIDAVQKIPYAHEKAIHAVEYHPLGHLLCTAGSD 437
>CGD|CAL0004667 [details] [associations]
symbol:SEC13 species:5476 "Candida albicans" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0005643 GO:GO:0051028 EMBL:AACQ01000027
EMBL:AACQ01000026 KO:K14004 RefSeq:XP_720011.1 RefSeq:XP_720143.1
ProteinModelPortal:Q5AEF2 SMR:Q5AEF2 STRING:Q5AEF2 GeneID:3638207
GeneID:3638425 KEGG:cal:CaO19.316 KEGG:cal:CaO19.7948
Uniprot:Q5AEF2
Length = 298
Score = 110 (43.8 bits), Expect = 0.00068, P = 0.00068
Identities = 33/133 (24%), Positives = 58/133 (43%)
Query: 11 PVTTHAWNNT--RQQ--LAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPN 66
PV+T + ++ +QQ + ++ +++Y+ A N + + L+GH V + W+P+
Sbjct: 158 PVSTSSKDSAALKQQRRIVSCGSDNLAKIWKYDAANNTYVEEAKLEGHTDWVRDVAWSPS 217
Query: 67 T---NRIVTCSADRNAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENKFAAGSGAR 123
+ I T S DR +WTQ+ D K K L + WS N A G
Sbjct: 218 NLIRSYIATASQDRTVLIWTQDRDGKWQKQLLTEEKFPDVCWRCSWSLSGNILAVSGGDN 277
Query: 124 LISVCYFESENDW 136
+S+ + W
Sbjct: 278 KVSLWKENLQGKW 290
>UNIPROTKB|B3GEK9 [details] [associations]
symbol:npp-20 "Nuclear pore complex protein 20"
species:135651 "Caenorhabditis brenneri" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0005643 "nuclear pore" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 GO:GO:0005643
GO:GO:0000910 EMBL:EU692928 ProteinModelPortal:B3GEK9 STRING:B3GEK9
Uniprot:B3GEK9
Length = 209
Score = 106 (42.4 bits), Expect = 0.00084, P = 0.00084
Identities = 29/132 (21%), Positives = 50/132 (37%)
Query: 24 LAFTPNNQEVHLYQYEKAANDWSQLDVLDGHDLKVTGIDWAPNT------NRIVTCSADR 77
LA + + ++ + +Y+ W + H+ V + WAP T R+V+ D
Sbjct: 27 LASSSADGDIGILRYDTVTGQWQSSKIQKCHEQGVNSVSWAPGTADLSAKKRLVSAGNDN 86
Query: 78 NAYVWTQNNDDKKWKPTLVLLRINRAATCVKWSPLENK-----FAAGSGARLISVCYFES 132
+W N+ +W VL W P+ NK + G L+
Sbjct: 87 KVKIWLLNDTTNEWTCEKVLSGHTDYVREASWCPVTNKGQHSIVSCGIDGNLVLFRTANI 146
Query: 133 ENDWWVAKHIKK 144
E D W +K ++K
Sbjct: 147 ETDEWKSKLLEK 158
>DICTYBASE|DDB_G0292052 [details] [associations]
symbol:sec13 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0030127 "COPII vesicle coat"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0005643 "nuclear pore" evidence=IEA;ISS]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292052 GenomeReviews:CM000155_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
EMBL:AAFI02000187 GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643
GO:GO:0006888 GO:GO:0051028 GO:GO:0030127 KO:K14004 OMA:IKLWKEE
RefSeq:XP_629794.1 ProteinModelPortal:Q54DS8 SMR:Q54DS8
STRING:Q54DS8 PRIDE:Q54DS8 EnsemblProtists:DDB0235182
GeneID:8628472 KEGG:ddi:DDB_G0292052 ProtClustDB:CLSZ2429468
Uniprot:Q54DS8
Length = 301
Score = 109 (43.4 bits), Expect = 0.00091, P = 0.00091
Identities = 29/112 (25%), Positives = 53/112 (47%)
Query: 38 YEKAANDWSQLDVLDGHDLKVTGIDWAPNT----NRIVTCSADRNAYVWTQNNDDKKW-- 91
++ + W L+ H V + WAPN ++I +CS DR+ VWTQ+ ++ W
Sbjct: 192 FKNVEDKWILDKQLEDHKDWVRDVAWAPNIGLPYSKIASCSQDRSVIVWTQD-ENGVWSG 250
Query: 92 KPTLVLLRINRAATCVKWSPLENKFAAGSGARLISVCYFESENDWWVAKHIK 143
KP L + + V WS + N A G +++ +++W + H++
Sbjct: 251 KP---LPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKLISHVE 299
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.130 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 244 244 0.00098 113 3 11 22 0.46 33
32 0.45 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 99
No. of states in DFA: 621 (66 KB)
Total size of DFA: 243 KB (2128 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 21.91u 0.11s 22.02t Elapsed: 00:00:08
Total cpu time: 21.93u 0.12s 22.05t Elapsed: 00:00:09
Start: Thu Aug 15 12:23:31 2013 End: Thu Aug 15 12:23:40 2013