BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1153
(195 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91089707|ref|XP_974909.1| PREDICTED: similar to AGAP000598-PA [Tribolium castaneum]
gi|270011317|gb|EFA07765.1| hypothetical protein TcasGA2_TC005319 [Tribolium castaneum]
Length = 244
Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/158 (81%), Positives = 144/158 (91%), Gaps = 1/158 (0%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
VLEE GQTIDFP GQAAYCSPLGKLLFRIEGVKSVF G +FITVTK DD+++WK++KPEI
Sbjct: 70 VLEE-GQTIDFPNGQAAYCSPLGKLLFRIEGVKSVFLGPEFITVTKTDDEIEWKIIKPEI 128
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
FATIMDFF+SGLPVL DA P++DT I+EDD E VQMIKELLDTRIRPTVQEDGGDI F+
Sbjct: 129 FATIMDFFASGLPVLNDATPNADTQINEDDSEIVQMIKELLDTRIRPTVQEDGGDIIFMG 188
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G+VKLK+QG+CTSCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 189 YDDGIVKLKLQGACTSCPSSIVTLKNGVQNMLQFYIPE 226
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ + DG+++
Sbjct: 164 MIKELLDTRIRPTVQEDGGDIIFMGYDDGIVK 195
>gi|345486124|ref|XP_003425407.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Nasonia vitripennis]
Length = 278
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/153 (81%), Positives = 140/153 (91%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
GQT DFP+ A+CSPL K+LFRIEGVKSVFFG DFIT+TK D+DV+WKL+KPEIFATIM
Sbjct: 92 GQTKDFPSATDAFCSPLAKMLFRIEGVKSVFFGSDFITITKIDEDVEWKLIKPEIFATIM 151
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP+ T+AQ SSDTVI+EDDDE VQMIKELLDTRIRPTVQEDGGDI F+ F+ G+
Sbjct: 152 DFFASGLPIFTEAQSSSDTVINEDDDEIVQMIKELLDTRIRPTVQEDGGDIVFMGFENGI 211
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSCTSCPSSVVTLKNGVQNM+QFYIPE
Sbjct: 212 VKLKMQGSCTSCPSSVVTLKNGVQNMMQFYIPE 244
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ F++G+++
Sbjct: 182 MIKELLDTRIRPTVQEDGGDIVFMGFENGIVK 213
>gi|239799267|dbj|BAH70563.1| ACYPI005854 [Acyrthosiphon pisum]
Length = 254
Score = 266 bits (679), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 125/165 (75%), Positives = 144/165 (87%), Gaps = 1/165 (0%)
Query: 24 ISFQDGV-LEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
+ F GV + E G T+DFP AAYCSPL K+LFRIEGVKSVFFG D+IT+TK DDD++W
Sbjct: 56 VKFLPGVQVLEKGHTMDFPNATAAYCSPLAKVLFRIEGVKSVFFGSDYITLTKTDDDIEW 115
Query: 83 KLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDG 142
+LKPEI+ATIMDFF+SGLP+LTDA+P+SDT IHEDD+ETV MIKELLD+RIRPTVQEDG
Sbjct: 116 MVLKPEIYATIMDFFASGLPILTDAKPTSDTQIHEDDNETVMMIKELLDSRIRPTVQEDG 175
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GDI FI + G+VKLK+QGSCTSCPSSVVTLK GVQNMLQFYIPE
Sbjct: 176 GDILFIGYDAGIVKLKLQGSCTSCPSSVVTLKGGVQNMLQFYIPE 220
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLD+RIRPTVQEDGGDI FI + G+++
Sbjct: 158 MIKELLDSRIRPTVQEDGGDILFIGYDAGIVK 189
>gi|193599106|ref|XP_001949519.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Acyrthosiphon pisum]
Length = 254
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 124/165 (75%), Positives = 143/165 (86%), Gaps = 1/165 (0%)
Query: 24 ISFQDGV-LEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
+ F GV + E G T+DFP AAYCSPL K+LFRIEGVKSVFFG D+IT+TK DDD++W
Sbjct: 56 VKFLPGVQVLEKGHTMDFPNATAAYCSPLAKVLFRIEGVKSVFFGSDYITLTKTDDDIEW 115
Query: 83 KLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDG 142
+LKPEI+ATIMDFF+SGLP+LTDA+P+SDT IHEDD+ETV MIKELLD+RIRPTVQEDG
Sbjct: 116 MVLKPEIYATIMDFFASGLPILTDAKPTSDTQIHEDDNETVMMIKELLDSRIRPTVQEDG 175
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GDI FI + G+VKLK+QGSCTSCPSSVVTLK GVQ MLQFYIPE
Sbjct: 176 GDILFIGYDAGIVKLKLQGSCTSCPSSVVTLKGGVQYMLQFYIPE 220
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLD+RIRPTVQEDGGDI FI + G+++
Sbjct: 158 MIKELLDSRIRPTVQEDGGDILFIGYDAGIVK 189
>gi|340712507|ref|XP_003394800.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Bombus terrestris]
Length = 275
Score = 261 bits (666), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/155 (78%), Positives = 137/155 (88%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
E GQT DFP AYCSPL K+LFRI+GVKSVFFG DFIT++K D+DV+WKLLKPEIFA
Sbjct: 87 ETGQTKDFPNATDAYCSPLAKMLFRIDGVKSVFFGPDFITISKADEDVEWKLLKPEIFAV 146
Query: 93 IMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
IMDFF++GLP+LTD QP++DT I EDD E VQMIKELLDTRIRPTVQEDGGDI F+ F+
Sbjct: 147 IMDFFATGLPILTDEQPATDTQISEDDSEIVQMIKELLDTRIRPTVQEDGGDIVFMGFEE 206
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLKMQGSCTSCPSSV+TLKNGVQNM+QFYIPE
Sbjct: 207 GIVKLKMQGSCTSCPSSVITLKNGVQNMMQFYIPE 241
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ F++G+++
Sbjct: 179 MIKELLDTRIRPTVQEDGGDIVFMGFEEGIVK 210
>gi|350399846|ref|XP_003485658.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Bombus impatiens]
Length = 275
Score = 260 bits (664), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/155 (78%), Positives = 137/155 (88%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
E GQT DFP AYCSPL K+LFRI+GVKSVFFG DFIT++K D+DV+WKLLKPEIFA
Sbjct: 87 ETGQTKDFPNATDAYCSPLAKMLFRIDGVKSVFFGPDFITISKADEDVEWKLLKPEIFAV 146
Query: 93 IMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
IMDFF++GLP+LTD QP++DT I EDD E VQMIKELLDTRIRPTVQEDGGDI F+ F+
Sbjct: 147 IMDFFATGLPILTDEQPATDTQISEDDSEIVQMIKELLDTRIRPTVQEDGGDIVFMGFEE 206
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLKMQGSCTSCPSSV+TLKNGVQNM+QFYIPE
Sbjct: 207 GIVKLKMQGSCTSCPSSVITLKNGVQNMMQFYIPE 241
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ F++G+++
Sbjct: 179 MIKELLDTRIRPTVQEDGGDIVFMGFEEGIVK 210
>gi|66543732|ref|XP_395826.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Apis mellifera]
Length = 275
Score = 259 bits (661), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 125/165 (75%), Positives = 141/165 (85%), Gaps = 1/165 (0%)
Query: 24 ISFQDGV-LEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
+ F GV + E GQT DFP YCSPL K+LFRI+GVKSVFFG DFIT+TK D+DV+W
Sbjct: 77 LKFLPGVKILEQGQTKDFPNAIDGYCSPLAKMLFRIDGVKSVFFGPDFITITKADEDVEW 136
Query: 83 KLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDG 142
KLLKPEIFA IMDFF+SGLPVLTD QP++DT I +DD E VQMIKELLDTRIRPTVQEDG
Sbjct: 137 KLLKPEIFAVIMDFFASGLPVLTDEQPAADTQISDDDSEIVQMIKELLDTRIRPTVQEDG 196
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GDI F+ F+ G+VKLKMQGSCTSCPSSV+TLKNGVQNM+QFYIPE
Sbjct: 197 GDIVFMGFEEGIVKLKMQGSCTSCPSSVITLKNGVQNMMQFYIPE 241
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ F++G+++
Sbjct: 179 MIKELLDTRIRPTVQEDGGDIVFMGFEEGIVK 210
>gi|380016958|ref|XP_003692434.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Apis florea]
Length = 275
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 120/155 (77%), Positives = 136/155 (87%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
E GQT DFP YCSPL K+LFRI+GVKSVFFG DFIT+TK D+DV+WKLLKPEIFA
Sbjct: 87 EQGQTKDFPNAIDGYCSPLAKMLFRIDGVKSVFFGPDFITITKADEDVEWKLLKPEIFAV 146
Query: 93 IMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
IMDFF+SGLP+LTD +P++DT I +DD E VQMIKELLDTRIRPTVQEDGGDI F+ F+
Sbjct: 147 IMDFFASGLPILTDEEPAADTQISDDDSEIVQMIKELLDTRIRPTVQEDGGDIVFMGFEE 206
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLKMQGSCTSCPSSV+TLKNGVQNM+QFYIPE
Sbjct: 207 GIVKLKMQGSCTSCPSSVITLKNGVQNMMQFYIPE 241
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ F++G+++
Sbjct: 179 MIKELLDTRIRPTVQEDGGDIVFMGFEEGIVK 210
>gi|157167461|ref|XP_001654807.1| hypothetical protein AaeL_AAEL002148 [Aedes aegypti]
gi|108882432|gb|EAT46657.1| AAEL002148-PA [Aedes aegypti]
Length = 263
Score = 255 bits (652), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 126/193 (65%), Positives = 151/193 (78%), Gaps = 15/193 (7%)
Query: 8 TRIRPTVQEDGGDIQFISFQD-------------GVLEEPGQTIDFPTGQAAYCSPLGKL 54
T P + + FI QD VLE+ GQT+DFPT AA CSPL KL
Sbjct: 41 TNTHPALASNHVRTMFIQTQDTPNPDSLKFLPGVAVLEK-GQTMDFPTQAAALCSPLAKL 99
Query: 55 LFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTV 114
LFRIEGV+SVFFG DF+T++K ++ +W+L+KPE+FA IMDFF+SGLPV+TDA+P DT
Sbjct: 100 LFRIEGVRSVFFGADFVTISKHEE-AEWRLIKPEVFAVIMDFFASGLPVVTDAKPMGDTQ 158
Query: 115 IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLK 174
I+EDDDETVQMIKELLD++IRPTVQEDGGDI F++F+ GVVKLKMQGSC+SCPSS+VTLK
Sbjct: 159 INEDDDETVQMIKELLDSKIRPTVQEDGGDIIFMAFEDGVVKLKMQGSCSSCPSSIVTLK 218
Query: 175 NGVQNMLQFYIPE 187
NGVQNMLQFYIPE
Sbjct: 219 NGVQNMLQFYIPE 231
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 31/32 (96%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLD++IRPTVQEDGGDI F++F+DGV++
Sbjct: 169 MIKELLDSKIRPTVQEDGGDIIFMAFEDGVVK 200
>gi|225711062|gb|ACO11377.1| NFU1 iron-sulfur cluster scaffold homolog [Caligus rogercresseyi]
Length = 237
Score = 255 bits (651), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 120/160 (75%), Positives = 143/160 (89%), Gaps = 2/160 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDD-DVDWKLLKPE 88
VLE G T+DFPT AAYCSPL KLLFR++GVK VFFG DFIT+TK++D +V+WK++KPE
Sbjct: 48 VLETAGSTLDFPTPSAAYCSPLAKLLFRVDGVKGVFFGQDFITITKEEDSEVEWKVIKPE 107
Query: 89 IFATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
++AT+MDFF+SGLP++ DA+P SDT IHEDDD+TV MIKELLD+RIRPTVQEDGGDI F
Sbjct: 108 VYATLMDFFASGLPIVNEDAKPHSDTEIHEDDDDTVAMIKELLDSRIRPTVQEDGGDIIF 167
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ F+ G+VKLKMQGSCTSCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 168 MGFEDGIVKLKMQGSCTSCPSSIVTLKNGVQNMLQFYIPE 207
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLD+RIRPTVQEDGGDI F+ F+DG+++
Sbjct: 145 MIKELLDSRIRPTVQEDGGDIIFMGFEDGIVK 176
>gi|225710000|gb|ACO10846.1| NFU1 iron-sulfur cluster scaffold homolog [Caligus rogercresseyi]
Length = 237
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 119/160 (74%), Positives = 142/160 (88%), Gaps = 2/160 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDD-DVDWKLLKPE 88
VLE G T+DFPT AAYCSPL KLLFR++GVK VFFG DFIT+TK++D +V+WK++KPE
Sbjct: 48 VLETAGSTLDFPTPSAAYCSPLAKLLFRVDGVKGVFFGQDFITITKEEDSEVEWKVIKPE 107
Query: 89 IFATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
++AT+MDFF+SGLP++ DA+P SDT IHED D+TV MIKELLD+RIRPTVQEDGGDI F
Sbjct: 108 VYATLMDFFASGLPIVNEDAKPHSDTEIHEDGDDTVAMIKELLDSRIRPTVQEDGGDIIF 167
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ F+ G+VKLKMQGSCTSCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 168 MGFEDGIVKLKMQGSCTSCPSSIVTLKNGVQNMLQFYIPE 207
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLD+RIRPTVQEDGGDI F+ F+DG+++
Sbjct: 145 MIKELLDSRIRPTVQEDGGDIIFMGFEDGIVK 176
>gi|347964133|ref|XP_310479.5| AGAP000598-PA [Anopheles gambiae str. PEST]
gi|333466873|gb|EAA06366.5| AGAP000598-PA [Anopheles gambiae str. PEST]
Length = 273
Score = 252 bits (643), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 117/155 (75%), Positives = 139/155 (89%), Gaps = 1/155 (0%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
E GQT+DFP+ AA CSPL KLLFR+EGV++VFFG DF+T++KQ+D +W+++KPE+FA
Sbjct: 81 EKGQTMDFPSVSAAQCSPLAKLLFRVEGVRAVFFGGDFVTISKQED-AEWRIIKPEVFAV 139
Query: 93 IMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
IMDFF+SGLPV+TDA+P+ DT +EDDDETVQMIKELLDTRIRPTVQEDGGDI F+ F
Sbjct: 140 IMDFFASGLPVVTDAKPNPDTQFNEDDDETVQMIKELLDTRIRPTVQEDGGDIIFMGFDD 199
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVVKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 200 GVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 234
Score = 56.2 bits (134), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ F DGV++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDIIFMGFDDGVVK 203
>gi|383852412|ref|XP_003701722.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Megachile rotundata]
Length = 276
Score = 251 bits (642), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 123/156 (78%), Positives = 136/156 (87%), Gaps = 3/156 (1%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
+PGQT DFP AYCSPL K++FRIEGVKSVFFG DFITVTK D+DV+WKLLKPEIFA
Sbjct: 88 QPGQTKDFPHVSDAYCSPLAKMIFRIEGVKSVFFGPDFITVTKIDEDVEWKLLKPEIFAV 147
Query: 93 IMDFFSSGLPVLTDAQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
IMDFF+SGLPVL D QP+ T+ H DDD E VQMIKELLDTRIRPTVQEDGGDI F+ F+
Sbjct: 148 IMDFFASGLPVLNDDQPA--TIAHSDDDSEIVQMIKELLDTRIRPTVQEDGGDIVFMGFE 205
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLKMQGSCTSCPSSVVTL+NGVQNM+QFYIPE
Sbjct: 206 EGIVKLKMQGSCTSCPSSVVTLRNGVQNMMQFYIPE 241
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 10/83 (12%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEG 60
MIKELLDTRIRPTVQEDGGDI F+ F++G+++ Q G C P + R G
Sbjct: 179 MIKELLDTRIRPTVQEDGGDIVFMGFEEGIVKLKMQ------GSCTSC-PSSVVTLR-NG 230
Query: 61 VKSV--FFGHDFITVTKQDDDVD 81
V+++ F+ + + V + +D+ D
Sbjct: 231 VQNMMQFYIPEVLGVVQVEDETD 253
>gi|405971247|gb|EKC36093.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Crassostrea gigas]
gi|405971248|gb|EKC36094.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Crassostrea gigas]
Length = 210
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/164 (73%), Positives = 139/164 (84%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV TIDFP Q++ CSPL KLLFRI+GVK VFFG +FITVTK DDD+DW+
Sbjct: 14 LKFVPGVQVLESGTIDFPNPQSSACSPLAKLLFRIDGVKGVFFGPEFITVTKADDDLDWQ 73
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGG 143
++KP+I+ATIMDFF+S LP+LTD QPS+DT I DDDETV MIKELLDTRIRPTVQEDGG
Sbjct: 74 VMKPDIYATIMDFFASNLPILTDEQPSADTAIDPDDDETVLMIKELLDTRIRPTVQEDGG 133
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI ++ F+ G+VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE
Sbjct: 134 DIVYMGFEDGIVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 177
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI ++ F+DG+++
Sbjct: 115 MIKELLDTRIRPTVQEDGGDIVYMGFEDGIVK 146
>gi|225711844|gb|ACO11768.1| NFU1 iron-sulfur cluster scaffold homolog [Lepeophtheirus salmonis]
Length = 238
Score = 249 bits (637), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/160 (75%), Positives = 139/160 (86%), Gaps = 2/160 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDD-DVDWKLLKPE 88
VLE G TIDFP AA+CSPL KLLFR+EGVK VFFG DFIT+TK+++ + +WKL+KP
Sbjct: 50 VLETAGSTIDFPQPSAAFCSPLAKLLFRVEGVKGVFFGPDFITITKEEEVNAEWKLMKPL 109
Query: 89 IFATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
I+ATIMDFF+SGLP++ DA+P SDT IHEDDD+TV MIKELLD+RIRPTVQEDGGDI F
Sbjct: 110 IYATIMDFFASGLPIVNEDAKPHSDTEIHEDDDDTVAMIKELLDSRIRPTVQEDGGDIVF 169
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ F GVVKLKMQGSCTSCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 170 MGFDDGVVKLKMQGSCTSCPSSIVTLKNGVQNMLQFYIPE 209
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLD+RIRPTVQEDGGDI F+ F DGV++
Sbjct: 147 MIKELLDSRIRPTVQEDGGDIVFMGFDDGVVK 178
>gi|195169040|ref|XP_002025336.1| GL13432 [Drosophila persimilis]
gi|263504975|sp|B4H303.1|NFU1_DROPE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194108792|gb|EDW30835.1| GL13432 [Drosophila persimilis]
Length = 282
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 114/153 (74%), Positives = 137/153 (89%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+G AA+CSPL KLLFR+EGV++VFFG DFIT++K++ +W L+KPE+FA IM
Sbjct: 88 GNTYDFPSGTAAHCSPLAKLLFRVEGVRAVFFGSDFITISKEES-AEWSLIKPEVFAVIM 146
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP+L +A+P++DT I +DDDETV MIKELLDTRIRPTVQEDGGDI FIS++ GV
Sbjct: 147 DFFASGLPILHEARPNADTEILDDDDETVMMIKELLDTRIRPTVQEDGGDIVFISYENGV 206
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 207 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 239
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 31/32 (96%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI FIS+++GV++
Sbjct: 177 MIKELLDTRIRPTVQEDGGDIVFISYENGVVK 208
>gi|195059008|ref|XP_001995543.1| GH17809 [Drosophila grimshawi]
gi|263505270|sp|B4JWR9.1|NFU1_DROGR RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|193896329|gb|EDV95195.1| GH17809 [Drosophila grimshawi]
Length = 298
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 114/153 (74%), Positives = 137/153 (89%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+ AA+CSPL KLLFR+EGV++VFFG DFIT++K+++ +W L+KPE+FA IM
Sbjct: 104 GNTYDFPSATAAHCSPLAKLLFRVEGVRAVFFGSDFITISKEENG-EWGLIKPEVFAVIM 162
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP+L +A+P++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI FIS++ GV
Sbjct: 163 DFFASGLPILHEARPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFISYEKGV 222
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 223 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 255
Score = 57.4 bits (137), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI FIS++ GV++
Sbjct: 193 MIKELLDTRIRPTVQEDGGDIVFISYEKGVVK 224
>gi|322798976|gb|EFZ20436.1| hypothetical protein SINV_01605 [Solenopsis invicta]
Length = 226
Score = 249 bits (635), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 116/154 (75%), Positives = 139/154 (90%), Gaps = 1/154 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+ + AYCSPL K+LFRIEGVK++FFG DFITVTK D+DV+WKLLKPE+FATIM
Sbjct: 40 GCTKDFPSAKDAYCSPLAKMLFRIEGVKAIFFGPDFITVTKIDEDVEWKLLKPEVFATIM 99
Query: 95 DFFSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
DFF++GLPV+ + +QP++DT I+ +DDE VQMIKELLDTRIRPTVQEDGGDI F+ F+ G
Sbjct: 100 DFFATGLPVMDETSQPAADTQINAEDDEIVQMIKELLDTRIRPTVQEDGGDIVFVGFEEG 159
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+VKLKMQGSCT+CPSSVVTL+NGVQNM+QFYIPE
Sbjct: 160 IVKLKMQGSCTNCPSSVVTLRNGVQNMMQFYIPE 193
Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ F++G+++
Sbjct: 131 MIKELLDTRIRPTVQEDGGDIVFVGFEEGIVK 162
>gi|198470316|ref|XP_002133420.1| GA22888 [Drosophila pseudoobscura pseudoobscura]
gi|263504850|sp|B5DKJ8.1|NFU1_DROPS RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|198145392|gb|EDY72048.1| GA22888 [Drosophila pseudoobscura pseudoobscura]
Length = 286
Score = 249 bits (635), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 114/153 (74%), Positives = 137/153 (89%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+G AA+CSPL KLLFR+EGV++VFFG DFIT++K++ +W L+KPE+FA IM
Sbjct: 92 GNTYDFPSGTAAHCSPLAKLLFRVEGVRAVFFGSDFITISKEES-AEWSLIKPEVFAVIM 150
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP+L +A+P++DT I +DDDETV MIKELLDTRIRPTVQEDGGDI FIS++ GV
Sbjct: 151 DFFASGLPILHEARPNADTEILDDDDETVMMIKELLDTRIRPTVQEDGGDIVFISYENGV 210
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 211 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 243
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 31/32 (96%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI FIS+++GV++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFISYENGVVK 212
>gi|6760408|gb|AAF28338.1|AF213379_1 r10h10-like protein TO42 [Drosophila melanogaster]
gi|6554171|gb|AAF16622.1| TO42 [Drosophila melanogaster]
Length = 286
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 116/153 (75%), Positives = 133/153 (86%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP G A+ SPL KLLFR+EGVK VFFG DF+T++KQ+ +W L+KPE+FA IM
Sbjct: 95 GNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFFGADFVTISKQEG-AEWSLIKPEVFAVIM 153
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPVL DAQP++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++GGV
Sbjct: 154 DFFASGLPVLNDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEGGV 213
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 214 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 246
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 184 MIKELLDTRIRPTVQEDGGDIVFMGYEGGVVK 215
>gi|195392814|ref|XP_002055049.1| GJ19011 [Drosophila virilis]
gi|263505537|sp|B4M375.1|NFU1_DROVI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194149559|gb|EDW65250.1| GJ19011 [Drosophila virilis]
Length = 298
Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 112/153 (73%), Positives = 136/153 (88%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+G AA+CSPL KLLFR+EGV++VFFG DFIT++K++ +W L+KPE+FA IM
Sbjct: 100 GNTYDFPSGSAAHCSPLAKLLFRVEGVRAVFFGGDFITISKEESG-EWGLIKPEVFAVIM 158
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPV+ +A+P++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ G+
Sbjct: 159 DFFASGLPVIHEARPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYENGI 218
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 219 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 251
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ +++G+++
Sbjct: 189 MIKELLDTRIRPTVQEDGGDIVFMGYENGIVK 220
>gi|24643765|ref|NP_728443.1| CG32857 [Drosophila melanogaster]
gi|45551492|ref|NP_728447.2| CG32500 [Drosophila melanogaster]
gi|45556188|ref|NP_996529.1| CG33502 [Drosophila melanogaster]
gi|74866115|sp|Q8SY96.1|NFU1_DROME RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|17946577|gb|AAL49319.1| RH16335p [Drosophila melanogaster]
gi|22831388|gb|AAG22462.2| CG33502 [Drosophila melanogaster]
gi|22831391|gb|AAN09001.1| CG32857 [Drosophila melanogaster]
gi|45446754|gb|AAN09005.2| CG32500 [Drosophila melanogaster]
gi|220949278|gb|ACL87182.1| CG32500-PA [synthetic construct]
gi|220958368|gb|ACL91727.1| CG32500-PA [synthetic construct]
Length = 283
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 116/153 (75%), Positives = 133/153 (86%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP G A+ SPL KLLFR+EGVK VFFG DF+T++KQ+ +W L+KPE+FA IM
Sbjct: 92 GNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFFGADFVTISKQEG-AEWSLIKPEVFAVIM 150
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPVL DAQP++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++GGV
Sbjct: 151 DFFASGLPVLNDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEGGV 210
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 211 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 243
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFMGYEGGVVK 212
>gi|291225596|ref|XP_002732785.1| PREDICTED: GM13534-like [Saccoglossus kowalevskii]
Length = 275
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 112/151 (74%), Positives = 134/151 (88%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DFPT + A+ SPL + LFRI+GVKSVF G DFIT+TK DDD +WK++KPE++A +MDF
Sbjct: 91 TMDFPTARVAHGSPLARQLFRIDGVKSVFLGPDFITITKHDDDSEWKIIKPEVYAAVMDF 150
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F++GLP+LTD QPS+DT IH DDDETV MIKELLDTRIRPTVQEDGGDI ++ F+ G+VK
Sbjct: 151 FATGLPILTDEQPSADTEIHPDDDETVAMIKELLDTRIRPTVQEDGGDIVYMGFEKGIVK 210
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LKMQGSCTSCPSSVVTLK+GVQNMLQFY+PE
Sbjct: 211 LKMQGSCTSCPSSVVTLKSGVQNMLQFYVPE 241
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI ++ F+ G+++
Sbjct: 179 MIKELLDTRIRPTVQEDGGDIVYMGFEKGIVK 210
>gi|195482335|ref|XP_002102005.1| GE15286 [Drosophila yakuba]
gi|263505516|sp|B4PZ52.1|NFU1_DROYA RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194189529|gb|EDX03113.1| GE15286 [Drosophila yakuba]
Length = 283
Score = 246 bits (629), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 115/153 (75%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP G A+ SPL KLLFR+EGVK VFFG DF+T++KQ+ +W L+KPE+FA IM
Sbjct: 92 GNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGADFVTISKQEG-AEWSLIKPEVFAVIM 150
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPVL DAQP++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ GV
Sbjct: 151 DFFASGLPVLHDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGV 210
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 211 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 243
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFMGYEAGVVK 212
>gi|195357024|ref|XP_002044916.1| GM13534 [Drosophila sechellia]
gi|263505008|sp|B4IMF6.1|NFU1_DROSE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194124051|gb|EDW46094.1| GM13534 [Drosophila sechellia]
Length = 283
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/153 (75%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP G A+ SPL KLLFR+EGVK VFFG DFIT++KQ+ +W L+KPE+FA IM
Sbjct: 92 GNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGADFITISKQEG-AEWSLIKPEVFAVIM 150
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPVL DAQP++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ GV
Sbjct: 151 DFFASGLPVLNDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGV 210
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 211 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 243
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFMGYEAGVVK 212
>gi|195568040|ref|XP_002107563.1| GD15490 [Drosophila simulans]
gi|263505455|sp|B4R3T1.1|NFU1_DROSI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194204973|gb|EDX18549.1| GD15490 [Drosophila simulans]
Length = 283
Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 116/153 (75%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP G A+ SPL KLLFR+EGVK VFFG DFIT++KQ+ +W L+KPE+FA IM
Sbjct: 92 GNTYDFPHGTTAHSSPLAKLLFRVEGVKGVFFGADFITISKQEG-AEWSLIKPEVFAVIM 150
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPVL DAQP++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ GV
Sbjct: 151 DFFASGLPVLNDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGV 210
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 211 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 243
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFMGYEAGVVK 212
>gi|194897711|ref|XP_001978709.1| GG17526 [Drosophila erecta]
gi|263504966|sp|B3NYF7.1|NFU1_DROER RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|190650358|gb|EDV47636.1| GG17526 [Drosophila erecta]
Length = 283
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 115/153 (75%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP G A+ SPL KLLFR+EGVK VFFG DF+T++KQ+ +W L+KPE+FA IM
Sbjct: 92 GNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGADFVTISKQEG-AEWSLIKPEVFAVIM 150
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPVL DAQP++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ GV
Sbjct: 151 DFFASGLPVLHDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGV 210
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 211 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 243
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFMGYEAGVVK 212
>gi|332028326|gb|EGI68373.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Acromyrmex echinatior]
Length = 211
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 118/154 (76%), Positives = 137/154 (88%), Gaps = 4/154 (2%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+ + AYCSPL K+LFRIEGVK++FFG DFITVTK D+DV+WKLLKPEIFATIM
Sbjct: 26 GCTKDFPSAKDAYCSPLAKMLFRIEGVKAIFFGPDFITVTKVDEDVEWKLLKPEIFATIM 85
Query: 95 DFFSSGLPVLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
DFF+SGLPV+ +A QP++DT I+ +DDE VQMIKELLDTRIRPTVQEDGGD I F+ G
Sbjct: 86 DFFASGLPVMDEASQPAADTQINAEDDEVVQMIKELLDTRIRPTVQEDGGD---IGFEEG 142
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+VKLKMQGSCT+CPSSVVTL+NGVQNM+QFYIPE
Sbjct: 143 IVKLKMQGSCTNCPSSVVTLRNGVQNMMQFYIPE 176
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%), Gaps = 3/32 (9%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD I F++G+++
Sbjct: 117 MIKELLDTRIRPTVQEDGGD---IGFEEGIVK 145
>gi|357625645|gb|EHJ76025.1| hypothetical protein KGM_02013 [Danaus plexippus]
Length = 173
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 113/145 (77%), Positives = 133/145 (91%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
EPGQT+DFP AA+CSPL K+LFRIEGVK VFFG DF+T+TKQDDDVDWKL+KPE+FAT
Sbjct: 24 EPGQTLDFPNIGAAHCSPLAKMLFRIEGVKGVFFGSDFVTITKQDDDVDWKLVKPEVFAT 83
Query: 93 IMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
IMDFF+SGLP++TDA+PS DT I++DDDE VQMIKELLDTRIRPTVQEDGGD+ F+ F+
Sbjct: 84 IMDFFASGLPIVTDAKPSGDTQINDDDDEIVQMIKELLDTRIRPTVQEDGGDVLFVDFKD 143
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGV 177
GV++LKMQGSC+SCPSS+VTLKNGV
Sbjct: 144 GVLRLKMQGSCSSCPSSIVTLKNGV 168
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ F+ F+DGVL
Sbjct: 116 MIKELLDTRIRPTVQEDGGDVLFVDFKDGVLR 147
>gi|307215410|gb|EFN90079.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Harpegnathos saltator]
Length = 265
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/153 (75%), Positives = 134/153 (87%), Gaps = 3/153 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP + AYCSPL K+LFRIEGVK++FFG DFITVTK D+D++WKLLKPEIFATIM
Sbjct: 81 GCTKDFPNAKDAYCSPLAKMLFRIEGVKAIFFGPDFITVTKLDEDIEWKLLKPEIFATIM 140
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP++ ++Q ++DT I DDDE VQMIKELLDTRIRPTVQEDGGD I F+ G+
Sbjct: 141 DFFASGLPIMDESQLAADTQISTDDDEVVQMIKELLDTRIRPTVQEDGGD---IGFEEGI 197
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSCT+CPSSVVTL+NGVQNM+QFYIPE
Sbjct: 198 VKLKMQGSCTNCPSSVVTLRNGVQNMMQFYIPE 230
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%), Gaps = 3/32 (9%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD I F++G+++
Sbjct: 171 MIKELLDTRIRPTVQEDGGD---IGFEEGIVK 199
>gi|195132295|ref|XP_002010579.1| GI14603 [Drosophila mojavensis]
gi|193909029|gb|EDW07896.1| GI14603 [Drosophila mojavensis]
Length = 259
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 112/153 (73%), Positives = 135/153 (88%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+G AA+CSPL KLLFR+EGV++VFFG DFIT++K++ +W L+KPE+FA IM
Sbjct: 65 GNTYDFPSGAAAHCSPLAKLLFRVEGVRAVFFGGDFITISKEESG-EWGLIKPEVFAIIM 123
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP+L +A+ ++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ GV
Sbjct: 124 DFFASGLPILHEARANADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYENGV 183
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 184 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 216
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ +++GV++
Sbjct: 154 MIKELLDTRIRPTVQEDGGDIVFMGYENGVVK 185
>gi|195447128|ref|XP_002071076.1| GK25604 [Drosophila willistoni]
gi|263505026|sp|B4NE93.1|NFU1_DROWI RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|194167161|gb|EDW82062.1| GK25604 [Drosophila willistoni]
Length = 289
Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/153 (73%), Positives = 134/153 (87%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+ AA+CSPL KLLFR+EGV+SVFFG DFIT++K++ +W L+KPE+FA IM
Sbjct: 93 GNTYDFPSVAAAHCSPLAKLLFRVEGVRSVFFGSDFITISKEEA-AEWGLIKPEVFAVIM 151
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP+L +A+ ++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+S+ GV
Sbjct: 152 DFFASGLPILHEARNNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMSYDNGV 211
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 212 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 244
Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+S+ +GV++
Sbjct: 182 MIKELLDTRIRPTVQEDGGDIVFMSYDNGVVK 213
>gi|312384995|gb|EFR29592.1| hypothetical protein AND_01304 [Anopheles darlingi]
Length = 214
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/155 (74%), Positives = 134/155 (86%), Gaps = 1/155 (0%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
+ GQT+DFP +A CSPL KLLFRIEGV+SVFFG DF+T++K +D +W ++KPE FA
Sbjct: 24 DAGQTMDFPNVSSAQCSPLAKLLFRIEGVRSVFFGADFVTISKVED-AEWSIIKPETFAV 82
Query: 93 IMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
IMDFF+SGLPV+T A P++ T I+EDDDETVQMIKELLDTRIRPTVQEDGGDI F+ F
Sbjct: 83 IMDFFASGLPVVTGANPNNSTQINEDDDETVQMIKELLDTRIRPTVQEDGGDIIFMGFDD 142
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVVKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 143 GVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 177
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 10/83 (12%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEG 60
MIKELLDTRIRPTVQEDGGDI F+ F DGV++ Q G + C ++ G
Sbjct: 115 MIKELLDTRIRPTVQEDGGDIIFMGFDDGVVKLKMQ------GSCSSCP--SSIVTLKNG 166
Query: 61 VKSV--FFGHDFITVTKQDDDVD 81
V+++ F+ + ++V + D+VD
Sbjct: 167 VQNMLQFYIPEVVSVEQVTDEVD 189
>gi|194763845|ref|XP_001964043.1| GF20932 [Drosophila ananassae]
gi|263505256|sp|B3MRT7.1|NFU1_DROAN RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; Flags: Precursor
gi|190618968|gb|EDV34492.1| GF20932 [Drosophila ananassae]
Length = 286
Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 147/197 (74%), Gaps = 14/197 (7%)
Query: 3 KELLDTRIRPTVQEDGGDIQFISFQDGVLEEP------------GQTIDFPTGQAAYCSP 50
K LL T+ R +Q G FI QD E G T DFP+G A+ SP
Sbjct: 49 KGLLQTQQR-QIQLSGARNMFIQTQDTPNPESLKFLPGVEVLGKGNTHDFPSGTTAHGSP 107
Query: 51 LGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPS 110
L KLLFR+EGV++VFFG DFIT++K++ +W L+KPE+FA IMDFF+SGLP+L ++ P+
Sbjct: 108 LAKLLFRVEGVRAVFFGADFITISKEEG-AEWSLIKPEVFAVIMDFFASGLPILHESTPN 166
Query: 111 SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSV 170
+DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ G+VKLKMQGSC+SCPSS+
Sbjct: 167 ADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSI 226
Query: 171 VTLKNGVQNMLQFYIPE 187
VTLKNGVQNMLQFYIPE
Sbjct: 227 VTLKNGVQNMLQFYIPE 243
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ +++G+++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFMGYENGIVK 212
>gi|307189950|gb|EFN74186.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Camponotus floridanus]
Length = 289
Score = 239 bits (609), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 113/154 (73%), Positives = 135/154 (87%), Gaps = 4/154 (2%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+ + AYCS L K+LFRIEGVK++FFG DFITVTK D+DV+WKLLKPEIFATIM
Sbjct: 106 GCTKDFPSAKDAYCSSLAKMLFRIEGVKAIFFGPDFITVTKLDEDVEWKLLKPEIFATIM 165
Query: 95 DFFSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
DFF+SGLP++ + +QP++DT I+ DDDE VQMIKELL+TRIRPTVQEDGGD I F+ G
Sbjct: 166 DFFASGLPIMNETSQPATDTQINADDDEIVQMIKELLETRIRPTVQEDGGD---IGFEEG 222
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+VKLKMQGSCT+CPSS VTL+NGVQNM++FYIPE
Sbjct: 223 IVKLKMQGSCTNCPSSAVTLRNGVQNMMRFYIPE 256
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 13/83 (15%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEG 60
MIKELL+TRIRPTVQEDGGD I F++G+++ Q G C P + R G
Sbjct: 197 MIKELLETRIRPTVQEDGGD---IGFEEGIVKLKMQ------GSCTNC-PSSAVTLR-NG 245
Query: 61 VKSV--FFGHDFITVTKQDDDVD 81
V+++ F+ + + V + +D+ D
Sbjct: 246 VQNMMRFYIPEVLGVVQVEDETD 268
>gi|53136898|emb|CAG32778.1| hypothetical protein RCJMB04_35n21 [Gallus gallus]
Length = 232
Score = 236 bits (602), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 110/158 (69%), Positives = 135/158 (85%), Gaps = 2/158 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
VLE +T++F + AA+CSPL + LFRIEGVKSVFFG DFIT+TK+ +D+DW LLKP+I
Sbjct: 56 VLE--SRTMEFSSPAAAFCSPLARQLFRIEGVKSVFFGPDFITITKESEDLDWNLLKPDI 113
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
+ATIMDFF+SGLPVLT+ P +DT E+DDE V MIKELLDTRIRPTVQEDGGD+ +
Sbjct: 114 YATIMDFFASGLPVLTEEAPRTDTAQSEEDDEVVLMIKELLDTRIRPTVQEDGGDVIYKG 173
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 174 FEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 211
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 149 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 180
>gi|347800691|ref|NP_001006305.2| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Gallus
gallus]
Length = 252
Score = 235 bits (600), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 112/169 (66%), Positives = 141/169 (83%), Gaps = 3/169 (1%)
Query: 19 GDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDD 78
++FI ++ VLE +T++F + AA+CSPL + LFRIEGVKSVFFG DFIT+TK+ +
Sbjct: 66 NSLKFIPGKE-VLE--SRTMEFSSPAAAFCSPLARQLFRIEGVKSVFFGPDFITITKESE 122
Query: 79 DVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTV 138
D+DW LLKP+I+ATIMDFF+SGLPVLT+ P +DT E+DDE V MIKELLDTRIRPTV
Sbjct: 123 DLDWNLLKPDIYATIMDFFASGLPVLTEEAPRTDTAQSEEDDEVVLMIKELLDTRIRPTV 182
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
QEDGGD+ + F+ G+V+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 183 QEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 231
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 169 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 200
>gi|326932642|ref|XP_003212423.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Meleagris gallopavo]
Length = 233
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 106/153 (69%), Positives = 132/153 (86%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T++F + AA+CSPL + LFRIEGVKS+FFG DFIT+TK+ +D+DW LLKP+I+ATIM
Sbjct: 60 SRTMEFSSPAAAFCSPLARQLFRIEGVKSIFFGPDFITITKESEDLDWNLLKPDIYATIM 119
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPVLT+ P +DT E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+
Sbjct: 120 DFFASGLPVLTEEAPRTDTAQSEEDDEVVLMIKELLDTRIRPTVQEDGGDVIYKGFEDGI 179
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 180 VQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 212
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 150 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 181
>gi|146326964|gb|AAI41716.1| Lpd-8 protein [Xenopus laevis]
Length = 250
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/153 (69%), Positives = 129/153 (84%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T+DFP +A+CSPL + LFRIEGVKSVFFG DFIT+TK +D+DW L+KP+IFATIM
Sbjct: 78 ARTMDFPNPASAFCSPLARHLFRIEGVKSVFFGPDFITITKNGEDMDWNLIKPDIFATIM 137
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFFS+GLPV+TD P D E++DE V MIKELLDTRIRPTVQEDGGD+ + FQ G+
Sbjct: 138 DFFSTGLPVVTDEAPRGDPAASEEEDEVVAMIKELLDTRIRPTVQEDGGDVLYKGFQDGI 197
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 198 VQLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 230
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + FQDG+++
Sbjct: 168 MIKELLDTRIRPTVQEDGGDVLYKGFQDGIVQ 199
>gi|114108171|gb|AAI23134.1| Lpd-8 protein [Xenopus laevis]
Length = 249
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 106/153 (69%), Positives = 129/153 (84%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T+DFP +A+CSPL + LFRIEGVKSVFFG DFIT+TK +D+DW L+KP+IFATIM
Sbjct: 77 ARTMDFPNPASAFCSPLARHLFRIEGVKSVFFGPDFITITKNGEDMDWNLIKPDIFATIM 136
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFFS+GLPV+TD P D E++DE V MIKELLDTRIRPTVQEDGGD+ + FQ G+
Sbjct: 137 DFFSTGLPVVTDEAPRGDPAASEEEDEVVAMIKELLDTRIRPTVQEDGGDVLYKGFQDGI 196
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 197 VQLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 229
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + FQDG+++
Sbjct: 167 MIKELLDTRIRPTVQEDGGDVLYKGFQDGIVQ 198
>gi|443733606|gb|ELU17898.1| hypothetical protein CAPTEDRAFT_18536 [Capitella teleta]
Length = 207
Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/159 (71%), Positives = 134/159 (84%), Gaps = 2/159 (1%)
Query: 29 GVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPE 88
GVLE T+DFP+ ++A+ SP+ K LFR+EGVK VF G DFIT+TK D+ VDW++LKPE
Sbjct: 21 GVLET--GTMDFPSVRSAHGSPIAKRLFRLEGVKGVFLGSDFITITKVDERVDWQILKPE 78
Query: 89 IFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
IFA IMDFF+SG PV+T P +DT + EDDDETV MIKELLDTRIRPTVQEDGGDI F+
Sbjct: 79 IFAVIMDFFASGQPVITGEPPPADTEVFEDDDETVAMIKELLDTRIRPTVQEDGGDIVFM 138
Query: 149 SFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V+LKMQGSCTSCPSSVVTLK+GVQNMLQFYIPE
Sbjct: 139 GFEEGIVRLKMQGSCTSCPSSVVTLKSGVQNMLQFYIPE 177
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 29/31 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELLDTRIRPTVQEDGGDI F+ F++G++
Sbjct: 115 MIKELLDTRIRPTVQEDGGDIVFMGFEEGIV 145
>gi|350537073|ref|NP_001232275.1| putative iron-sulfur cluster scaffold protein Nfu variant 3
[Taeniopygia guttata]
gi|197128017|gb|ACH44515.1| putative iron-sulfur cluster scaffold protein Nfu variant 3
[Taeniopygia guttata]
Length = 252
Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/159 (69%), Positives = 133/159 (83%), Gaps = 2/159 (1%)
Query: 29 GVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPE 88
VLE +T++F T AAYCSPL + LFRIEGVKSVFFG DFIT+TK+ +D+DW LLKP+
Sbjct: 75 AVLE--SRTMEFSTPAAAYCSPLARQLFRIEGVKSVFFGPDFITITKESEDLDWNLLKPD 132
Query: 89 IFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
I+ATIMDFF+SGLPV+TD +DT E+DDE V MIKELLDTRIRPTVQEDGGD+ +
Sbjct: 133 IYATIMDFFASGLPVVTDEASRTDTAASEEDDEVVLMIKELLDTRIRPTVQEDGGDVIYK 192
Query: 149 SFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 193 GFEDGIVLLKLQGSCTSCPSSLITLKSGIQNMLQFYIPE 231
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 169 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 199
>gi|334312031|ref|XP_001381686.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Monodelphis domestica]
Length = 196
Score = 232 bits (591), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 109/153 (71%), Positives = 131/153 (85%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
QT+DFPT A+ SPL + LFRIEGVKSVF G DFITVTK+ +D+DW LLKP+I+ATIM
Sbjct: 25 SQTMDFPTPATAFRSPLARQLFRIEGVKSVFLGPDFITVTKESEDLDWNLLKPDIYATIM 84
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP+LT+ PSS+T E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+
Sbjct: 85 DFFASGLPILTEETPSSETA-TEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGI 143
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 144 VQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 176
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 114 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 145
>gi|387017300|gb|AFJ50768.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Crotalus
adamanteus]
Length = 248
Score = 232 bits (591), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 104/153 (67%), Positives = 131/153 (85%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T++F + + YCSPL + LFRIEG+KS+FFG DFITVTK+ +DVDW L+KP+I+ATIM
Sbjct: 77 SRTMEFLSPASTYCSPLARQLFRIEGIKSIFFGTDFITVTKESEDVDWNLIKPDIYATIM 136
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DF++SGLP++T+ P +DT E+DDE V MIKELLDTRIRPTVQEDGGD+ F F+ G+
Sbjct: 137 DFYASGLPIVTEEAPRTDTAPSEEDDEVVLMIKELLDTRIRPTVQEDGGDVIFKGFEDGI 196
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS+VTLKNG+QNMLQFYIPE
Sbjct: 197 VQLKLQGSCTSCPSSIVTLKNGIQNMLQFYIPE 229
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ F F+DG+++
Sbjct: 167 MIKELLDTRIRPTVQEDGGDVIFKGFEDGIVQ 198
>gi|390348426|ref|XP_798698.3| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 209
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/152 (71%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDD-VDWKLLKPEIFATIMD 95
T DFP+ A+ SPL + LFRIEGV+ VFFG DFITVTK DDD +DW++LKPEI+AT+MD
Sbjct: 27 TKDFPSAMNAHGSPLARQLFRIEGVQGVFFGPDFITVTKMDDDNIDWRVLKPEIYATVMD 86
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF++G+P+LTD +DT I EDDDETV MIKELLDTRIRPTVQEDGGDI ++ F+ GVV
Sbjct: 87 FFATGVPILTDETAPTDTEIQEDDDETVMMIKELLDTRIRPTVQEDGGDIVYMGFEEGVV 146
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
KLK+QG+CTSCPSS+VTLK+GVQNMLQFY+PE
Sbjct: 147 KLKLQGACTSCPSSIVTLKHGVQNMLQFYVPE 178
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI ++ F++GV++
Sbjct: 116 MIKELLDTRIRPTVQEDGGDIVYMGFEEGVVK 147
>gi|355751378|gb|EHH55633.1| hypothetical protein EGM_04877 [Macaca fascicularis]
Length = 254
Score = 229 bits (583), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++D+DW LLKP+I+ATIMD
Sbjct: 84 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEDLDWNLLKPDIYATIMD 143
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 144 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 202
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 203 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 234
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 203
>gi|402891127|ref|XP_003908809.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Papio anubis]
Length = 254
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++D+DW LLKP+I+ATIMD
Sbjct: 84 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEDLDWNLLKPDIYATIMD 143
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 144 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 202
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 203 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 234
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 203
>gi|402891131|ref|XP_003908811.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 3 [Papio anubis]
Length = 196
Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++D+DW LLKP+I+ATIMD
Sbjct: 26 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEDLDWNLLKPDIYATIMD 85
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 86 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 144
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 145 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 176
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 114 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 145
>gi|355565754|gb|EHH22183.1| hypothetical protein EGK_05404 [Macaca mulatta]
gi|380789185|gb|AFE66468.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Macaca mulatta]
gi|384941620|gb|AFI34415.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Macaca mulatta]
Length = 254
Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++D+DW LLKP+I+ATIMD
Sbjct: 84 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEDLDWNLLKPDIYATIMD 143
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 144 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 202
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 203 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 234
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 203
>gi|402891129|ref|XP_003908810.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 2 [Papio anubis]
gi|380786363|gb|AFE65057.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Macaca mulatta]
Length = 230
Score = 228 bits (582), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++D+DW LLKP+I+ATIMD
Sbjct: 60 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEDLDWNLLKPDIYATIMD 119
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 120 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 178
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 179 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 210
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 148 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 179
>gi|351708084|gb|EHB11003.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial
[Heterocephalus glaber]
Length = 229
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++D+DW LLKP+I+ATIMD
Sbjct: 59 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEDLDWNLLKPDIYATIMD 118
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ + SS E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 119 FFASGLPLVTE-ETSSGEAASEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 177
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 178 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 209
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 147 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 178
>gi|114577877|ref|XP_001137587.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 7 [Pan troglodytes]
Length = 230
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 60 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 119
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 120 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 178
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 179 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 210
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 148 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 179
>gi|118403546|ref|NP_001072356.1| NFU1 iron-sulfur cluster scaffold homolog [Xenopus (Silurana)
tropicalis]
gi|111307911|gb|AAI21453.1| HIRA interacting protein 5 [Xenopus (Silurana) tropicalis]
Length = 199
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 101/153 (66%), Positives = 129/153 (84%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T+DFP+ +A+CSPL + LFRI+GVKSVF G DFIT+TK +++DW L+KP+I+ATIM
Sbjct: 25 ARTMDFPSPASAFCSPLARHLFRIDGVKSVFLGPDFITITKNSEELDWNLIKPDIYATIM 84
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPV+T+ P D E++DE V MIKELLDTRIRPTVQEDGGD+ + FQ G+
Sbjct: 85 DFFASGLPVVTEDAPRGDAAASEEEDEVVAMIKELLDTRIRPTVQEDGGDVLYKGFQDGI 144
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 145 VQLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 177
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + FQDG+++
Sbjct: 115 MIKELLDTRIRPTVQEDGGDVLYKGFQDGIVQ 146
>gi|55596270|ref|XP_525775.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 8 [Pan troglodytes]
gi|397521803|ref|XP_003830976.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Pan paniscus]
gi|410209724|gb|JAA02081.1| NFU1 iron-sulfur cluster scaffold homolog [Pan troglodytes]
gi|410253660|gb|JAA14797.1| NFU1 iron-sulfur cluster scaffold homolog [Pan troglodytes]
gi|410291790|gb|JAA24495.1| NFU1 iron-sulfur cluster scaffold homolog [Pan troglodytes]
gi|410333769|gb|JAA35831.1| NFU1 iron-sulfur cluster scaffold homolog [Pan troglodytes]
Length = 254
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 84 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 143
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 144 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 202
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 203 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 234
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 203
>gi|50593025|ref|NP_056515.2| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 1
[Homo sapiens]
gi|32967071|gb|AAP92373.1| cytosolic iron-sulfur cluster scaffold protein Nfu [Homo sapiens]
gi|119620256|gb|EAW99850.1| HIRA interacting protein 5, isoform CRA_b [Homo sapiens]
Length = 230
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 60 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 119
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 120 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 178
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 179 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 210
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 148 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 179
>gi|34500319|gb|AAQ73784.1| NifU-like protein HIRIP5 [Homo sapiens]
gi|194374137|dbj|BAG62381.1| unnamed protein product [Homo sapiens]
Length = 254
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 84 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 143
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 144 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 202
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 203 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 234
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 203
>gi|50593021|ref|NP_001002755.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
[Homo sapiens]
gi|205371805|sp|Q9UMS0.2|NFU1_HUMAN RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; AltName: Full=HIRA-interacting protein 5;
Flags: Precursor
gi|32967069|gb|AAP92372.1| iron-sulfur cluster scaffold protein Nfu [Homo sapiens]
gi|109731123|gb|AAI13693.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Homo
sapiens]
gi|109731125|gb|AAI13695.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Homo
sapiens]
gi|119620255|gb|EAW99849.1| HIRA interacting protein 5, isoform CRA_a [Homo sapiens]
gi|261860742|dbj|BAI46893.1| NFU1 iron-sulfur cluster scaffold homolog [synthetic construct]
gi|313884030|gb|ADR83501.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
[synthetic construct]
Length = 254
Score = 227 bits (579), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 84 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 143
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 144 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 202
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 203 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 234
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 203
>gi|332813521|ref|XP_003309120.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Pan troglodytes]
gi|5738608|emb|CAB53015.1| HIRA-interacting protein HIRIP5 [Homo sapiens]
gi|62822279|gb|AAY14828.1| unknown [Homo sapiens]
gi|189054196|dbj|BAG36716.1| unnamed protein product [Homo sapiens]
Length = 196
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 26 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 85
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 86 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 144
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 145 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 176
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 114 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 145
>gi|403260508|ref|XP_003922710.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Saimiri boliviensis boliviensis]
Length = 254
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 84 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 143
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 144 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 202
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 203 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 234
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 203
>gi|403260510|ref|XP_003922711.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 2 [Saimiri boliviensis boliviensis]
Length = 230
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 60 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 119
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 120 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 178
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 179 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 210
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 148 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 179
>gi|332226734|ref|XP_003262547.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 3 [Nomascus leucogenys]
Length = 230
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFIT+TK+++++DW LLKP+I+ATIMD
Sbjct: 60 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITITKENEELDWNLLKPDIYATIMD 119
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 120 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 178
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 179 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 210
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 148 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 179
>gi|332226730|ref|XP_003262545.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Nomascus leucogenys]
Length = 254
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFIT+TK+++++DW LLKP+I+ATIMD
Sbjct: 84 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITITKENEELDWNLLKPDIYATIMD 143
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 144 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 202
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 203 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 234
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 203
>gi|31874276|emb|CAD98142.1| hypothetical protein [Homo sapiens]
Length = 242
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 84 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 143
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 144 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 202
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 203 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 234
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 203
>gi|441642027|ref|XP_004090414.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Nomascus leucogenys]
Length = 196
Score = 226 bits (577), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 105/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFIT+TK+++++DW LLKP+I+ATIMD
Sbjct: 26 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITITKENEELDWNLLKPDIYATIMD 85
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 86 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 144
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 145 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 176
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 114 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 145
>gi|296223650|ref|XP_002757718.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Callithrix jacchus]
Length = 235
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 65 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 124
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 125 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 183
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 184 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 215
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 153 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 184
>gi|114053059|ref|NP_001040031.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Bos
taurus]
gi|86823819|gb|AAI05370.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Bos
taurus]
gi|296482427|tpg|DAA24542.1| TPA: HIRA interacting protein 5 [Bos taurus]
Length = 253
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT A+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 83 RTMDFPTPATAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 142
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + EDDDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 143 FFASGLPLVTEETPSGEAG-SEDDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 201
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 202 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 233
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 171 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 202
>gi|301758232|ref|XP_002914967.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 420
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+ +++DW LLKP+I+ATIMD
Sbjct: 250 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKESEELDWNLLKPDIYATIMD 309
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ + SS E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 310 FFASGLPLVTE-ETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 368
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 369 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 400
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 338 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 369
>gi|348566587|ref|XP_003469083.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Cavia porcellus]
Length = 253
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 83 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 142
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ + SS E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 143 FFASGLPLVTE-ETSSGEPASEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 201
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 202 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 233
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 171 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 202
>gi|440907806|gb|ELR57903.1| NFU1 iron-sulfur cluster scaffold-like protein, mitochondrial,
partial [Bos grunniens mutus]
Length = 235
Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT A+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 78 RTMDFPTPATAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 137
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + EDDDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 138 FFASGLPLVTEETPSGEAG-SEDDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 196
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 197 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 228
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 166 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 197
>gi|149727512|ref|XP_001491099.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like isoform 1 [Equus caballus]
Length = 253
Score = 225 bits (574), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+ +++DW LLKP+I+ATIMD
Sbjct: 83 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKESEELDWNLLKPDIYATIMD 142
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ + SS E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 143 FFASGLPLVTE-ETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 201
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 202 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 233
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 171 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 202
>gi|348530364|ref|XP_003452681.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Oreochromis niloticus]
Length = 261
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/152 (68%), Positives = 130/152 (85%), Gaps = 1/152 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F + A+CSPL + LFRI+GVKSVF G DFIT+TK D +++WK++KP++FATIMDF
Sbjct: 93 TMNFAGPREAHCSPLARQLFRIDGVKSVFLGPDFITITKADPNLEWKVIKPDVFATIMDF 152
Query: 97 FSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
F+SGLPV+ D+QPS DT +DDDE V MIKELLDTRIRPTVQEDGGD+ + F+ GVV
Sbjct: 153 FTSGLPVVNEDSQPSPDTAPSDDDDEVVAMIKELLDTRIRPTVQEDGGDVLYRGFEDGVV 212
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
KLK+QGSCTSCPSS+VTLK+G+QNMLQFY+PE
Sbjct: 213 KLKLQGSCTSCPSSIVTLKSGIQNMLQFYVPE 244
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FR 57
MIKELLDTRIRPTVQEDGGD+ + F+DGV L+ G P+ S + +L F
Sbjct: 182 MIKELLDTRIRPTVQEDGGDVLYRGFEDGVVKLKLQGSCTSCPSSIVTLKSGIQNMLQFY 241
Query: 58 IEGVKSV 64
+ V+SV
Sbjct: 242 VPEVESV 248
>gi|355707161|gb|AES02874.1| NFU1 iron-sulfur cluster scaffold-like protein [Mustela putorius
furo]
Length = 202
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+ +++DW LLKP+I+ATIMD
Sbjct: 38 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKESEELDWNLLKPDIYATIMD 97
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ + SS E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 98 FFASGLPLVTE-ETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 156
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 157 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 188
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 126 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 157
>gi|195559882|ref|XP_002077376.1| GD12677 [Drosophila simulans]
gi|194202482|gb|EDX16058.1| GD12677 [Drosophila simulans]
Length = 175
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/137 (77%), Positives = 121/137 (88%), Gaps = 1/137 (0%)
Query: 52 GKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSS 111
KLLFR+EGVK VFFG DFIT++KQ+ +W L+KPE+FA IMDFF+SGLPVL DAQP++
Sbjct: 1 AKLLFRVEGVKGVFFGSDFITISKQEG-AEWSLIKPEVFAVIMDFFASGLPVLNDAQPNA 59
Query: 112 DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVV 171
DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ GVVKLKMQGSC+SCPSS+V
Sbjct: 60 DTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGVVKLKMQGSCSSCPSSIV 119
Query: 172 TLKNGVQNMLQFYIPET 188
TLKNGVQNMLQFYIPE
Sbjct: 120 TLKNGVQNMLQFYIPEV 136
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 73 MIKELLDTRIRPTVQEDGGDIVFMGYEAGVVK 104
>gi|170016007|ref|NP_001116180.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Danio
rerio]
Length = 243
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/152 (67%), Positives = 128/152 (84%), Gaps = 1/152 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DF + A+CSPL + LFRI+GVKSVFFG DFIT+TK + +WK++KP++FATIMDF
Sbjct: 77 TMDFAGPRDAFCSPLARQLFRIDGVKSVFFGPDFITITKTSGETEWKVIKPDVFATIMDF 136
Query: 97 FSSGLPVLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
F+SGLPV+ +A P +DT EDDDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 137 FTSGLPVINEADAPRADTAPSEDDDEVVAMIKELLDTRIRPTVQEDGGDVLYHGFEDGIV 196
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
KLK+QGSCTSCPSS++TLKNG+QNMLQFY+PE
Sbjct: 197 KLKLQGSCTSCPSSIITLKNGIQNMLQFYVPE 228
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 166 MIKELLDTRIRPTVQEDGGDVLYHGFEDGIVK 197
>gi|345776689|ref|XP_855433.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Canis lupus familiaris]
Length = 252
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+ +++DW LLKP+I+ATIMD
Sbjct: 82 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKESEELDWNLLKPDIYATIMD 141
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ + SS E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 142 FFASGLPLVTE-ETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 200
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 201 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 232
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 170 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 201
>gi|281346707|gb|EFB22291.1| hypothetical protein PANDA_002901 [Ailuropoda melanoleuca]
Length = 186
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+ +++DW LLKP+I+ATIMD
Sbjct: 29 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKESEELDWNLLKPDIYATIMD 88
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ + SS E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 89 FFASGLPLVTE-ETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 147
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 148 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 179
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 117 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 148
>gi|432874670|ref|XP_004072534.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Oryzias latipes]
Length = 250
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/159 (67%), Positives = 134/159 (84%), Gaps = 3/159 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
VLEE T+DF + AYCSPL + LFRI+GVKSVF G DFIT+TK D +++WK++KP++
Sbjct: 76 VLEE--GTMDFGGPRDAYCSPLARQLFRIDGVKSVFLGPDFITITKSDANMEWKVIKPDV 133
Query: 90 FATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
FA IMDFF+SGLPV+ D++PS+DT ++DDE V MIKELLDTRIRPTVQEDGGD+ +
Sbjct: 134 FAAIMDFFTSGLPVVNEDSKPSADTAPSDEDDEVVAMIKELLDTRIRPTVQEDGGDVVYR 193
Query: 149 SFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ GVVKLK+QGSCTSCPSS+VTLK+G+QNMLQFY+PE
Sbjct: 194 GFEDGVVKLKLQGSCTSCPSSIVTLKSGIQNMLQFYVPE 232
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DGV++
Sbjct: 170 MIKELLDTRIRPTVQEDGGDVVYRGFEDGVVK 201
>gi|37681825|gb|AAQ97790.1| HIRA interacting protein 5 [Danio rerio]
gi|62205090|gb|AAH92670.1| HIRA interacting protein 5 [Danio rerio]
gi|182891738|gb|AAI65097.1| Hirip5 protein [Danio rerio]
Length = 243
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 103/152 (67%), Positives = 128/152 (84%), Gaps = 1/152 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DF + A+CSPL + LFRI+GVKSVFFG DFIT+TK + +WK++KP++FATIMDF
Sbjct: 77 TMDFAGPRDAFCSPLARQLFRIDGVKSVFFGPDFITITKTSGETEWKVIKPDVFATIMDF 136
Query: 97 FSSGLPVLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
F+SGLPV+ +A P +DT EDDDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 137 FTSGLPVVNEADAPRADTAPSEDDDEVVAMIKELLDTRIRPTVQEDGGDVLYHGFEDGIV 196
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
KLK+QGSCTSCPSS++TLKNG+QNMLQFY+PE
Sbjct: 197 KLKLQGSCTSCPSSIITLKNGIQNMLQFYVPE 228
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 166 MIKELLDTRIRPTVQEDGGDVLYHGFEDGIVK 197
>gi|282154799|ref|NP_001100076.2| NFU1 iron-sulfur cluster scaffold homolog precursor [Rattus
norvegicus]
gi|149036647|gb|EDL91265.1| histone cell cycle regulation defective interacting protein 5
(predicted), isoform CRA_a [Rattus norvegicus]
Length = 253
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 104/152 (68%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 82 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 141
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ P + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 142 FFASGLPLVTEETPPGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGIV 200
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 201 RLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 232
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 170 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIVR 201
>gi|410954971|ref|XP_003984132.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Felis catus]
Length = 253
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+ +++DW LLKP+I+ATIMD
Sbjct: 83 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKESEELDWNLLKPDIYATIMD 142
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ + SS E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 143 FFASGLPLVTE-ETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 201
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 202 QLKLQGSCTSCPSSMITLKNGIQNMLQFYIPE 233
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 171 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 202
>gi|395841324|ref|XP_003793493.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 1 [Otolemur garnettii]
gi|395841326|ref|XP_003793494.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 2 [Otolemur garnettii]
Length = 229
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 102/152 (67%), Positives = 130/152 (85%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFP A+ SPL + LFRIEGVKSVFFG DFIT+TK+++++DW LLKP+I+ATIMD
Sbjct: 59 RTMDFPNPATAFQSPLARQLFRIEGVKSVFFGPDFITITKENEELDWNLLKPDIYATIMD 118
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
F++SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 119 FYASGLPIVTEEAPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 177
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 178 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 209
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 147 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 178
>gi|354491749|ref|XP_003508017.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Cricetulus griseus]
Length = 251
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 104/152 (68%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 81 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 140
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ P + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 141 FFASGLPLVTEETPPGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGIV 199
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 200 RLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 231
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 169 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIVR 200
>gi|26324295|dbj|BAC24985.1| unnamed protein product [Mus musculus]
Length = 200
Score = 223 bits (567), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/154 (67%), Positives = 131/154 (85%), Gaps = 2/154 (1%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 26 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 85
Query: 96 FFSSGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
FF+SGLP++T+ P + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G
Sbjct: 86 FFASGLPLVTEETPPPPGEAGSSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDG 145
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 146 IVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 179
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 117 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIV 147
>gi|6013069|emb|CAB57314.1| HIRA-interacting protein (HIRIP5) [Mus musculus]
gi|17390830|gb|AAH18355.1| NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Mus
musculus]
Length = 199
Score = 222 bits (566), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 104/153 (67%), Positives = 130/153 (84%), Gaps = 1/153 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 26 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 85
Query: 96 FFSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
FF+SGLP++T+ P E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+
Sbjct: 86 FFASGLPLVTEETPPPPGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGI 145
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 146 VRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 178
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 116 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIV 146
>gi|291386642|ref|XP_002709869.1| PREDICTED: HIRA interacting protein 5 [Oryctolagus cuniculus]
Length = 255
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/152 (68%), Positives = 131/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT +A+ SPL + LFRIEGVKSVFFG DFIT+TK ++++DW LLKP+I+ATIMD
Sbjct: 85 RTMDFPTPASAFRSPLARQLFRIEGVKSVFFGPDFITITKDNEELDWNLLKPDIYATIMD 144
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ + SS E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 145 FFASGLPLVTE-ETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 203
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 204 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 235
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 173 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 204
>gi|148666782|gb|EDK99198.1| mCG130855, isoform CRA_b [Mus musculus]
Length = 256
Score = 222 bits (565), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/154 (67%), Positives = 131/154 (85%), Gaps = 2/154 (1%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 82 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 141
Query: 96 FFSSGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
FF+SGLP++T+ P + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G
Sbjct: 142 FFASGLPLVTEETPPPPGEAGSSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDG 201
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 202 IVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 235
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 173 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIVR 204
>gi|282154803|ref|NP_001164062.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 1
precursor [Mus musculus]
gi|74211556|dbj|BAE26508.1| unnamed protein product [Mus musculus]
Length = 256
Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 104/154 (67%), Positives = 131/154 (85%), Gaps = 2/154 (1%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 82 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 141
Query: 96 FFSSGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
FF+SGLP++T+ P + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G
Sbjct: 142 FFASGLPLVTEETPPPPGEAGSSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDG 201
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 202 IVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 235
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 173 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIVR 204
>gi|34500321|gb|AAQ73785.1| NifU-like protein HIRIP5, partial [Mus musculus]
Length = 245
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 104/153 (67%), Positives = 130/153 (84%), Gaps = 1/153 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 72 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 131
Query: 96 FFSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
FF+SGLP++T+ P E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+
Sbjct: 132 FFASGLPLVTEETPPPPGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGI 191
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 192 VRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 224
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 162 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIVR 193
>gi|148666781|gb|EDK99197.1| mCG130855, isoform CRA_a [Mus musculus]
Length = 255
Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 104/153 (67%), Positives = 130/153 (84%), Gaps = 1/153 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 82 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 141
Query: 96 FFSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
FF+SGLP++T+ P E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+
Sbjct: 142 FFASGLPLVTEETPPPPGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGI 201
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 202 VRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 234
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIVR 203
>gi|282154801|ref|NP_064429.2| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 2
precursor [Mus musculus]
gi|205830867|sp|Q9QZ23.2|NFU1_MOUSE RecName: Full=NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial; AltName: Full=HIRA-interacting protein 5;
Short=mHIRIP5; Flags: Precursor
gi|12834577|dbj|BAB22965.1| unnamed protein product [Mus musculus]
Length = 255
Score = 221 bits (564), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 104/153 (67%), Positives = 130/153 (84%), Gaps = 1/153 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 82 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 141
Query: 96 FFSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
FF+SGLP++T+ P E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+
Sbjct: 142 FFASGLPLVTEETPPPPGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGI 201
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 202 VRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 234
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIVR 203
>gi|395509269|ref|XP_003758923.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Sarcophilus harrisii]
Length = 253
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 102/153 (66%), Positives = 128/153 (83%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T+DFPT A+ SPL + LFRIEGVKSVF G DFIT+TK+ +D+DW LLKP+I+ATIM
Sbjct: 82 SRTMDFPTPATAFRSPLARQLFRIEGVKSVFLGPDFITITKESEDLDWNLLKPDIYATIM 141
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP++ + S++ E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+
Sbjct: 142 DFFASGLPLVNEESLSTEAAT-EEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGI 200
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 201 VQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 233
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 171 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 202
>gi|242011992|ref|XP_002426727.1| HIRA-interacting protein, putative [Pediculus humanus corporis]
gi|212510898|gb|EEB13989.1| HIRA-interacting protein, putative [Pediculus humanus corporis]
Length = 216
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/155 (68%), Positives = 122/155 (78%), Gaps = 10/155 (6%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
E G+T DFP +A CSPLGK LFRI GVKSVFFG DFIT+TKQD+DV WKL+ PEIFAT
Sbjct: 37 ENGKTKDFPNAASALCSPLGKSLFRINGVKSVFFGPDFITITKQDEDVSWKLINPEIFAT 96
Query: 93 IMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
IMDFFSSGLP+LT+ + SD V ELL+TRIRPTVQEDGGD+ F F+
Sbjct: 97 IMDFFSSGLPILTENESKSDFVKE----------NELLETRIRPTVQEDGGDVVFKGFEN 146
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLK+ GSCT+CPSS+VTLKNG+QNMLQFYIPE
Sbjct: 147 GIVKLKLLGSCTTCPSSIVTLKNGIQNMLQFYIPE 181
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 3 KELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
ELL+TRIRPTVQEDGGD+ F F++G+++
Sbjct: 121 NELLETRIRPTVQEDGGDVVFKGFENGIVK 150
>gi|321470871|gb|EFX81846.1| hypothetical protein DAPPUDRAFT_49825 [Daphnia pulex]
Length = 206
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 111/169 (65%), Positives = 136/169 (80%), Gaps = 7/169 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F+ VLE +T+DFPT +A CSPL KLLFRIEGVKSVF G DFIT+TK D++
Sbjct: 14 LKFLPGVQVVLE--SETMDFPTLSSAQCSPLAKLLFRIEGVKSVFLGPDFITITKIDEET 71
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDA--QPSSDTVIHEDDDETVQMIKELLDTRIRPTV 138
DWK +K E+FATIMDFF+SGLPV+ + QP + +E+D++TV MIKELLD+RIRPTV
Sbjct: 72 DWKTIKAEVFATIMDFFTSGLPVVNEGINQPDNG---NEEDNDTVLMIKELLDSRIRPTV 128
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
QEDGGD+ F F+ G+V LK+QGSCTSCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 129 QEDGGDLVFKGFKDGIVYLKLQGSCTSCPSSMVTLKNGVQNMLQFYIPE 177
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELLD+RIRPTVQEDGGD+ F F+DG++
Sbjct: 115 MIKELLDSRIRPTVQEDGGDLVFKGFKDGIV 145
>gi|238231487|ref|NP_001154157.1| HIRA-interacting protein 5 [Oncorhynchus mykiss]
gi|225704456|gb|ACO08074.1| HIRA-interacting protein 5 [Oncorhynchus mykiss]
Length = 250
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/152 (66%), Positives = 126/152 (82%), Gaps = 1/152 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DF + AYCSPL + LFRI+GVK VF G DFIT+TK D D++WKL+KP++FA IMDF
Sbjct: 82 TMDFTAPREAYCSPLARQLFRIDGVKGVFLGPDFITITKTDVDLEWKLIKPDVFAAIMDF 141
Query: 97 FSSGLPVLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
F+SGLPV+ + P +DT +DDDE + MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 142 FTSGLPVVNEEDTPRADTAPSDDDDEVIAMIKELLDTRIRPTVQEDGGDVLYCGFEDGIV 201
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
KLK+QGSCTSCPSS+VTLK+G+QNMLQFY+PE
Sbjct: 202 KLKLQGSCTSCPSSMVTLKSGIQNMLQFYVPE 233
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLLF-- 56
MIKELLDTRIRPTVQEDGGD+ + F+DG+ L+ G P+ S + +L
Sbjct: 171 MIKELLDTRIRPTVQEDGGDVLYCGFEDGIVKLKLQGSCTSCPSSMVTLKSGIQNMLQFY 230
Query: 57 --RIEGVKSV 64
+EGV+ V
Sbjct: 231 VPEVEGVEQV 240
>gi|156389173|ref|XP_001634866.1| predicted protein [Nematostella vectensis]
gi|156221954|gb|EDO42803.1| predicted protein [Nematostella vectensis]
Length = 186
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/164 (64%), Positives = 128/164 (78%), Gaps = 1/164 (0%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GVL T++F + +A+ SPL + LFRI GVK V FG +FITVTK D++V W
Sbjct: 14 LKFVPGVLVLESGTVNFDSSSSAHRSPLARNLFRINGVKGVMFGPEFITVTKSDEEVQWS 73
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGG 143
+LKPEIFATIMDFFSS LP++T+ +P DT DDD TV MIKELLDTRIRPTVQEDGG
Sbjct: 74 VLKPEIFATIMDFFSSNLPIMTEEEPPQDTGSCNDDD-TVLMIKELLDTRIRPTVQEDGG 132
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI F F+ G+VKLKMQG+C SCPSS+VTLKNG++NM+QFYIPE
Sbjct: 133 DIIFKGFKDGIVKLKMQGACASCPSSIVTLKNGIENMMQFYIPE 176
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 33/48 (68%), Gaps = 6/48 (12%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYC 48
MIKELLDTRIRPTVQEDGGDI F F+DG+++ Q G A C
Sbjct: 114 MIKELLDTRIRPTVQEDGGDIIFKGFKDGIVKLKMQ------GACASC 155
>gi|4680705|gb|AAD27742.1|AF132967_1 CGI-33 protein [Homo sapiens]
Length = 231
Score = 216 bits (549), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 103/153 (67%), Positives = 129/153 (84%), Gaps = 2/153 (1%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHD-FITVTKQDDDVDWKLLKPEIFATIM 94
+T+DFPT AA+ SPL + LFRIEGVKSVFF FITVTK+++++DW LLKP+I+ATIM
Sbjct: 60 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFWDQIFITVTKENEELDWNLLKPDIYATIM 119
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP++T+ P + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+
Sbjct: 120 DFFASGLPLVTEETPPGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGI 178
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 179 VQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 211
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 149 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 180
>gi|344283678|ref|XP_003413598.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Loxodonta africana]
Length = 312
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/153 (68%), Positives = 130/153 (84%), Gaps = 2/153 (1%)
Query: 36 QTIDFPTGQAAYCS-PLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T+DFPT +A+ S LG LFRIEGVKSVFFG DFITVTK+ +++DW LL+P+I+ATIM
Sbjct: 141 RTMDFPTPASAFRSLWLGMQLFRIEGVKSVFFGPDFITVTKESEELDWNLLRPDIYATIM 200
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP++T+ + SS E+DDE V MIKELLDTRIRPTVQEDGGD+ F F+ G+
Sbjct: 201 DFFASGLPLVTE-ETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIFKGFEDGI 259
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 260 VQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 292
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ F F+DG+++
Sbjct: 230 MIKELLDTRIRPTVQEDGGDVIFKGFEDGIVQ 261
>gi|47212055|emb|CAF90173.1| unnamed protein product [Tetraodon nigroviridis]
Length = 196
Score = 215 bits (547), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 99/152 (65%), Positives = 128/152 (84%), Gaps = 1/152 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F + + A+CSPL + LFR++GVKSV G DFIT++K D ++DWK++KP++FATIMDF
Sbjct: 27 TMNFDSPRDAHCSPLARQLFRVDGVKSVLLGPDFITISKIDANIDWKVIKPDVFATIMDF 86
Query: 97 FSSGLPVLTDAQPS-SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
F+SGLPV+++ DT +DDDE V MIKELLDTRIRPTVQEDGGD+ + F+GGVV
Sbjct: 87 FTSGLPVVSEGSKQIEDTAPSDDDDELVAMIKELLDTRIRPTVQEDGGDVLYRGFEGGVV 146
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
KLK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 147 KLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 178
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FR 57
MIKELLDTRIRPTVQEDGGD+ + F+ GV L+ G P+ S + +L F
Sbjct: 116 MIKELLDTRIRPTVQEDGGDVLYRGFEGGVVKLKLQGSCTSCPSSIITLKSGIQNMLQFY 175
Query: 58 IEGVKSV 64
I V+SV
Sbjct: 176 IPEVESV 182
>gi|196003412|ref|XP_002111573.1| hypothetical protein TRIADDRAFT_55734 [Trichoplax adhaerens]
gi|190585472|gb|EDV25540.1| hypothetical protein TRIADDRAFT_55734 [Trichoplax adhaerens]
Length = 236
Score = 215 bits (547), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 97/164 (59%), Positives = 128/164 (78%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV TID+ + + A SPL K LFR++GVKSVF G DF+T+++ DDD++W
Sbjct: 49 LKFVPGVPVLGSGTIDYSSARDALTSPLAKNLFRVDGVKSVFLGPDFVTISRADDDIEWN 108
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGG 143
LKP+I+A IMDFF+SG PVL D +P++DT + +D +TV MIKELL+TRIRPT+QEDGG
Sbjct: 109 TLKPDIYAVIMDFFASGAPVLIDYEPATDTAVQPEDSDTVAMIKELLETRIRPTLQEDGG 168
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI ++ + G+VKLKMQG+C SCPS+ VTLK+G+QNMLQFYIPE
Sbjct: 169 DIVYMGYDNGIVKLKMQGACDSCPSATVTLKHGIQNMLQFYIPE 212
Score = 50.1 bits (118), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRPT+QEDGGDI ++ + +G+++
Sbjct: 150 MIKELLETRIRPTLQEDGGDIVYMGYDNGIVK 181
>gi|225717260|gb|ACO14476.1| NFU1 iron-sulfur cluster scaffold homolog [Esox lucius]
Length = 253
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/165 (60%), Positives = 128/165 (77%), Gaps = 1/165 (0%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + T+DF + AYC PL + LF I+GVK VF G DFIT+TK + D++WK
Sbjct: 72 LKFLPGCMVLERGTMDFAAPREAYCCPLARQLFGIDGVKGVFLGPDFITITKANVDLEWK 131
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQ-PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDG 142
L+KP++FA IMDFF+SGLPV+ + P +DT +DDDE + MIKELLDTRIRPTVQEDG
Sbjct: 132 LIKPDVFAAIMDFFASGLPVMNEEDTPRADTAPSDDDDEVITMIKELLDTRIRPTVQEDG 191
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GD+ + F+ G+VKLK+QGSCTSCPSS+VTLK+G+QNMLQFY+PE
Sbjct: 192 GDVLYRGFEDGIVKLKLQGSCTSCPSSIVTLKSGIQNMLQFYVPE 236
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 174 MIKELLDTRIRPTVQEDGGDVLYRGFEDGIVK 205
>gi|340374369|ref|XP_003385710.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Amphimedon queenslandica]
Length = 264
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 124/154 (80%), Gaps = 1/154 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP ++ S L + LFRI+GVKS+FFG DFITVTK DDD+ W +KP ++AT+M
Sbjct: 81 GGTRDFPNPLSSRPSVLAQQLFRIDGVKSIFFGPDFITVTKADDDMPWSTIKPHVYATVM 140
Query: 95 DFFSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
DFF+SGLPV+ + A PS D ED+DETV MIKELLDTRIRPTVQEDGGDI F+ F+ G
Sbjct: 141 DFFASGLPVIKEEATPSGDLPAEEDEDETVMMIKELLDTRIRPTVQEDGGDIVFVDFKDG 200
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+VKLKMQGSC++CPSS VTLK GV+NM+QFY+PE
Sbjct: 201 IVKLKMQGSCSNCPSSTVTLKAGVENMIQFYVPE 234
Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ F+DG+++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDIVFVDFKDGIVK 203
>gi|410925765|ref|XP_003976350.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Takifugu rubripes]
Length = 196
Score = 212 bits (540), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 96/152 (63%), Positives = 128/152 (84%), Gaps = 1/152 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F + + A+CSPL + LFR++GVKSV G DFIT++K D +++WK++KP++FA IMDF
Sbjct: 27 TMNFESPRDAHCSPLARQLFRVDGVKSVLLGTDFITISKSDANMEWKVIKPDVFAAIMDF 86
Query: 97 FSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
F+SGLPV+++ + S DT +DDDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 87 FTSGLPVVSEGSHQSEDTAPSDDDDEVVAMIKELLDTRIRPTVQEDGGDVLYRGFEDGIV 146
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
KLK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 147 KLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 178
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FR 57
MIKELLDTRIRPTVQEDGGD+ + F+DG+ L+ G P+ S + +L F
Sbjct: 116 MIKELLDTRIRPTVQEDGGDVLYRGFEDGIVKLKLQGSCTSCPSSIITLKSGIQNMLQFY 175
Query: 58 IEGVKSV 64
I V+SV
Sbjct: 176 IPEVESV 182
>gi|241156886|ref|XP_002407882.1| conserved hypothetical protein [Ixodes scapularis]
gi|215494245|gb|EEC03886.1| conserved hypothetical protein [Ixodes scapularis]
Length = 260
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 125/154 (81%), Gaps = 3/154 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFPT +A SPL K LFR+EGVK+VFFG DFITVTK DD+ +W++LKP ++A IMDF
Sbjct: 74 TRDFPTLASAKDSPLAKHLFRVEGVKAVFFGSDFITVTKADDETEWQVLKPHLYAAIMDF 133
Query: 97 FSSGLPVLTD--AQP-SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
F++GLPV+ + +P + DT EDD ETV MIKEL++TRIRPTVQEDGGDI ++ F+ G
Sbjct: 134 FTTGLPVVNEDGTEPVAEDTRPKEDDSETVLMIKELIETRIRPTVQEDGGDIVYMGFEDG 193
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VVKLK+QGSCT CPSS VTLK G+QNMLQFY+PE
Sbjct: 194 VVKLKLQGSCTGCPSSSVTLKAGIQNMLQFYVPE 227
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKEL++TRIRPTVQEDGGDI ++ F+DGV++
Sbjct: 165 MIKELIETRIRPTVQEDGGDIVYMGFEDGVVK 196
>gi|442749587|gb|JAA66953.1| Putative nifu-like domain-containing-containing protein [Ixodes
ricinus]
Length = 260
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 125/154 (81%), Gaps = 3/154 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFPT +A SPL K LFR+EGVK+VFFG DFITVTK DD+ +W++LKP ++A IMDF
Sbjct: 74 TRDFPTLASAKDSPLAKHLFRVEGVKAVFFGPDFITVTKADDETEWQVLKPHLYAAIMDF 133
Query: 97 FSSGLPVLTD--AQP-SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
F++GLPV+ + +P + DT EDD ETV MIKEL++TRIRPTVQEDGGDI ++ F+ G
Sbjct: 134 FTTGLPVVNEDGTEPVAEDTRPKEDDSETVLMIKELIETRIRPTVQEDGGDIVYMGFEDG 193
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VVKLK+QGSCT CPSS VTLK G+QNMLQFY+PE
Sbjct: 194 VVKLKLQGSCTGCPSSSVTLKAGIQNMLQFYVPE 227
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKEL++TRIRPTVQEDGGDI ++ F+DGV++
Sbjct: 165 MIKELIETRIRPTVQEDGGDIVYMGFEDGVVK 196
>gi|346471251|gb|AEO35470.1| hypothetical protein [Amblyomma maculatum]
Length = 259
Score = 206 bits (523), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 102/155 (65%), Positives = 120/155 (77%), Gaps = 4/155 (2%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFP +A SPL + LFR+EGVK+VF G DFITVTK DD+ +WK++KP IFA IMDF
Sbjct: 72 TRDFPNIASAKGSPLARHLFRVEGVKAVFLGPDFITVTKFDDETEWKVIKPHIFAAIMDF 131
Query: 97 FSSGLPVLTDA----QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
F++GLPVL D Q S DT E D ETV IKEL++TRIRPTVQEDGGDI ++ F+
Sbjct: 132 FTTGLPVLDDGSASTQVSEDTQPQEGDSETVLTIKELIETRIRPTVQEDGGDILYMGFED 191
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVVKLK+QGSCT CPSS VTLK G+QNMLQFY+PE
Sbjct: 192 GVVKLKLQGSCTGCPSSSVTLKAGIQNMLQFYVPE 226
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FRI 58
IKEL++TRIRPTVQEDGGDI ++ F+DGV L+ G P+ + + +L F +
Sbjct: 165 IKELIETRIRPTVQEDGGDILYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQNMLQFYV 224
Query: 59 EGVKSV 64
VKSV
Sbjct: 225 PEVKSV 230
>gi|444721161|gb|ELW61913.1| NFU1 iron-sulfur cluster scaffold like protein, mitochondrial
[Tupaia chinensis]
Length = 143
Score = 205 bits (521), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Query: 38 IDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFF 97
+DFPTG AA+ SPL + LFRIEGV+S+FFG DFITVTK+++++DW LLKP I+ATIMDFF
Sbjct: 1 MDFPTGAAAFRSPLARQLFRIEGVQSIFFGPDFITVTKENEELDWNLLKPVIYATIMDFF 60
Query: 98 SSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKL 157
+SGLP+ T+ PS + E+DDE V MIKELL TRIRPTVQEDGGDI + F+ G+V+L
Sbjct: 61 ASGLPLYTEETPSGEAG-SEEDDEVVAMIKELLGTRIRPTVQEDGGDIIYKGFEDGIVQL 119
Query: 158 KMQGSCTSCPSSVVTLKNGVQNML 181
K+QGSCTSCPSS VTLKNG+QN L
Sbjct: 120 KLQGSCTSCPSSSVTLKNGIQNKL 143
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL TRIRPTVQEDGGDI + F+DG+++
Sbjct: 87 MIKELLGTRIRPTVQEDGGDIIYKGFEDGIVQ 118
>gi|221104801|ref|XP_002157169.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Hydra magnipapillata]
Length = 267
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 109/156 (69%), Positives = 127/156 (81%), Gaps = 3/156 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDD-VDWKLLKPEIFATIMD 95
T+DFPT Y SPL + LFRI+GV+S+FFG DFIT++K DDD V W LLKP+I+A IMD
Sbjct: 85 TVDFPTPSHGYRSPLARQLFRIKGVRSIFFGKDFITISKSDDDDVSWVLLKPDIYAVIMD 144
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GG 153
FF+S LPVLTD P+ DT+ EDD+ETV +IKELLDTRIRPTVQEDGGDI F F G
Sbjct: 145 FFASNLPVLTDDVPAQDTIAAEDDNETVLLIKELLDTRIRPTVQEDGGDIIFKGFDSVSG 204
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+VKLK+QGSC+SCPSS VTLKNGVQNM+QFYIPE T
Sbjct: 205 IVKLKLQGSCSSCPSSSVTLKNGVQNMMQFYIPEVT 240
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
+IKELLDTRIRPTVQEDGGDI F F
Sbjct: 174 LIKELLDTRIRPTVQEDGGDIIFKGF 199
>gi|427792445|gb|JAA61674.1| Putative nifu-like domain-containing-containing protein, partial
[Rhipicephalus pulchellus]
Length = 257
Score = 202 bits (515), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/155 (64%), Positives = 119/155 (76%), Gaps = 4/155 (2%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFP +A SPL + L R+EGVK+VF G DFITVTK DD+ +WK++KP +FA IMDF
Sbjct: 70 TRDFPNIASAKDSPLARHLLRVEGVKAVFLGPDFITVTKVDDETEWKVIKPHVFAAIMDF 129
Query: 97 FSSGLPVLTDA----QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
F++GLPVL D Q S DT E D ETV IKEL++TRIRPTVQEDGGDI ++ F+
Sbjct: 130 FATGLPVLDDGSAPTQVSEDTQPKEGDSETVLTIKELIETRIRPTVQEDGGDIVYMGFED 189
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVVKLK+QGSCT CPSS VTLK G+QNMLQFY+PE
Sbjct: 190 GVVKLKLQGSCTGCPSSSVTLKAGIQNMLQFYVPE 224
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FRI 58
IKEL++TRIRPTVQEDGGDI ++ F+DGV L+ G P+ + + +L F +
Sbjct: 163 IKELIETRIRPTVQEDGGDIVYMGFEDGVVKLKLQGSCTGCPSSSVTLKAGIQNMLQFYV 222
Query: 59 EGVKSV 64
VKSV
Sbjct: 223 PEVKSV 228
>gi|431912616|gb|ELK14634.1| NFU1 iron-sulfur cluster scaffold like protein, mitochondrial
[Pteropus alecto]
Length = 318
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 116/133 (87%), Gaps = 1/133 (0%)
Query: 55 LFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTV 114
LFRIEGVK VFFG DFITVTK+ +++DW LLKP+I+ATIMDFF+SGLP++T+ + SS
Sbjct: 167 LFRIEGVKGVFFGPDFITVTKESEELDWNLLKPDIYATIMDFFASGLPLVTE-ETSSGEA 225
Query: 115 IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLK 174
E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V+LK+QGSCTSCPSS++TLK
Sbjct: 226 GSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQLKLQGSCTSCPSSIITLK 285
Query: 175 NGVQNMLQFYIPE 187
NG+QNMLQFYIPE
Sbjct: 286 NGIQNMLQFYIPE 298
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 236 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 267
>gi|17541876|ref|NP_501917.1| Protein LPD-8 [Caenorhabditis elegans]
gi|3879150|emb|CAA94609.1| Protein LPD-8 [Caenorhabditis elegans]
Length = 222
Score = 199 bits (505), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/158 (60%), Positives = 117/158 (74%), Gaps = 2/158 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
+L + +T DF + A SPL L R++GVK VFFG DF+TVTK D+ VDW LL+PEI
Sbjct: 37 LLPDASKTYDFSSAATAKQSPLAIKLLRVDGVKRVFFGEDFVTVTKSDETVDWALLRPEI 96
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
F+TI D +G PV+ +A SD V E+DDE V MIKE+L+TRIRP VQEDGGDI ++
Sbjct: 97 FSTIADHIQTGKPVINEAATVSDQV--EEDDEVVMMIKEILETRIRPMVQEDGGDITYVG 154
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F GVVKLKMQGSCT CPSS VTLKNG++NML FY+PE
Sbjct: 155 FDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLTFYVPE 192
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FR 57
MIKE+L+TRIRP VQEDGGDI ++ F DGV L+ G P+ + + +L F
Sbjct: 130 MIKEILETRIRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLTFY 189
Query: 58 IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+ VK V D + DD V+ +L K E I D
Sbjct: 190 VPEVKEVIEVKD-----ESDDLVEQELKKFEQSKGIKD 222
>gi|255568026|ref|XP_002524990.1| HIRA-interacting protein, putative [Ricinus communis]
gi|223535734|gb|EEF37397.1| HIRA-interacting protein, putative [Ricinus communis]
Length = 271
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/155 (61%), Positives = 118/155 (76%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
++DFP +AA SPL K L+ I+G VFFG DFITVTK DD V W LLKPEIFA IMDF
Sbjct: 96 SVDFPNARAALNSPLAKSLYGIDGTTRVFFGSDFITVTKSDD-VSWDLLKPEIFAAIMDF 154
Query: 97 FSSGLPVLTDAQ--PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D++ S DT IH+DD ETV MIKELL+TRIRP VQ+DGGDI++ F +
Sbjct: 155 YSSGQPLFLDSEIAASKDTAIHKDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPET 214
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLKMQG+C+ CPSS VTLK+G++NML Y+ E
Sbjct: 215 GIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVSE 249
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 185 MIKELLETRIRPAVQDDGGDIEYRGF 210
>gi|324510498|gb|ADY44390.1| NFU1 iron-sulfur cluster scaffold [Ascaris suum]
Length = 213
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 123/158 (77%), Gaps = 4/158 (2%)
Query: 34 PGQ-TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
PG+ T+DF + AA SPL LFR++GVKS+FFG DFITVTK D++ DW ++KPEIFAT
Sbjct: 25 PGRGTMDFTSVSAAKRSPLALQLFRVDGVKSIFFGEDFITVTKADEETDWAVMKPEIFAT 84
Query: 93 IMDFFSSGLPVLTDAQPSS---DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
IMDF +G ++ D + DT+IH +DD+TV MIKELL++R++P VQEDGGDI +
Sbjct: 85 IMDFLQTGKAIVNDGEVPDGPMDTMIHPEDDDTVAMIKELLESRVKPMVQEDGGDIIYKG 144
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F G+V LK++GSCT CPSS+VTLK+G++NMLQFY+PE
Sbjct: 145 FHDGIVHLKLKGSCTGCPSSLVTLKSGIKNMLQFYVPE 182
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 26/32 (81%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL++R++P VQEDGGDI + F DG++
Sbjct: 120 MIKELLESRVKPMVQEDGGDIIYKGFHDGIVH 151
>gi|410932901|ref|XP_003979831.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like, partial [Takifugu rubripes]
Length = 153
Score = 196 bits (498), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 89/134 (66%), Positives = 115/134 (85%), Gaps = 1/134 (0%)
Query: 55 LFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD-AQPSSDT 113
LFR++GVKSV G DFIT++K D +++WK++KP++FA IMDFF+SGLPV+++ + S DT
Sbjct: 2 LFRVDGVKSVLLGTDFITISKSDANMEWKVIKPDVFAAIMDFFTSGLPVVSEGSHQSEDT 61
Query: 114 VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTL 173
+DDDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+VKLK+QGSCTSCPSS++TL
Sbjct: 62 APSDDDDEVVAMIKELLDTRIRPTVQEDGGDVLYRGFEDGIVKLKLQGSCTSCPSSIITL 121
Query: 174 KNGVQNMLQFYIPE 187
K+G+QNMLQFYIPE
Sbjct: 122 KSGIQNMLQFYIPE 135
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FR 57
MIKELLDTRIRPTVQEDGGD+ + F+DG+ L+ G P+ S + +L F
Sbjct: 73 MIKELLDTRIRPTVQEDGGDVLYRGFEDGIVKLKLQGSCTSCPSSIITLKSGIQNMLQFY 132
Query: 58 IEGVKSV 64
I V+SV
Sbjct: 133 IPEVESV 139
>gi|268570156|ref|XP_002648431.1| C. briggsae CBR-LPD-8 protein [Caenorhabditis briggsae]
Length = 228
Score = 195 bits (496), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 93/158 (58%), Positives = 115/158 (72%), Gaps = 1/158 (0%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
+L + +T DF + A SPL L R++GVK VFFG DFITVTK D+ VDW LL+PEI
Sbjct: 42 LLPDASKTYDFSSAATAKQSPLAIKLLRVDGVKRVFFGEDFITVTKSDETVDWALLRPEI 101
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
F+TI D +G V+ +A ++ EDD+E V MIKE+L+TRIRP VQEDGGDI ++
Sbjct: 102 FSTIADHLQTGKSVINEASATAGEA-EEDDNEVVMMIKEILETRIRPMVQEDGGDITYVG 160
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F GVVKLKMQGSCT CPSS VTLKNG++NML FY+PE
Sbjct: 161 FDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLTFYVPE 198
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FR 57
MIKE+L+TRIRP VQEDGGDI ++ F DGV L+ G P+ + + +L F
Sbjct: 136 MIKEILETRIRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLTFY 195
Query: 58 IEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
+ VK V I V + DD+ K LK
Sbjct: 196 VPEVKEV------IEVKDESDDLVEKELK 218
>gi|296087967|emb|CBI35250.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K L+ I+G+ VFFG DFITVTK DD W +KPEIFA IMDF
Sbjct: 27 SADFPNSRSAMSSPLAKSLYGIDGITRVFFGSDFITVTKSDD-ASWDFIKPEIFAAIMDF 85
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D+ ++ DT IHEDD ETV MIKELL+TRIRP VQ+DGGDI++ F +
Sbjct: 86 YSSGKPLFLDSNTAAAMDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPET 145
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 146 GIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPE 180
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 116 MIKELLETRIRPAVQDDGGDIEYRGF 141
>gi|326497811|dbj|BAJ94768.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521670|dbj|BAK00411.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 268
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 114/153 (74%), Gaps = 5/153 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP + A SPL K LF IEGV VFFG DF+TVTK D+ W LKPE+FA IMDF+S
Sbjct: 96 DFPNARTAMTSPLAKALFAIEGVTRVFFGSDFVTVTKSDE-TSWDYLKPEVFAAIMDFYS 154
Query: 99 SGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SG P+ D+ ++ DT IHEDD E V MIKELL+TRIRP VQ+DGGDI++ F + G+
Sbjct: 155 SGQPLFLDSNTAAAMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFEPETGI 214
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 215 VKLKMQGACSGCPSSSVTLKSGIENMLMHYVPE 247
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQ 27
MIKELL+TRIRP VQ+DGGDI++ F+
Sbjct: 183 MIKELLETRIRPAVQDDGGDIEYRGFE 209
>gi|325087305|gb|ADY77002.1| iron-sulfur cluster assembly protein NFU4 [Ipomoea batatas]
gi|325087311|gb|ADY77005.1| iron-sulfur cluster assembly protein NFU4 [Ipomoea batatas]
Length = 281
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 115/155 (74%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K LF I+G+ VF+G DF+TVTK DD W LLKPEIFA IMDF
Sbjct: 106 SADFPNARSAMNSPLAKALFGIDGITRVFYGSDFVTVTKSDD-ASWDLLKPEIFAAIMDF 164
Query: 97 FSSGLPVLTDAQ--PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG-- 152
FSSG P+ D+ S DT I EDD ETV MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 165 FSSGKPLFLDSNTAASMDTAIQEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDADS 224
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKL+MQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 225 GIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPE 259
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 195 MIKELLETRIRPAVQDDGGDIEYRGF 220
>gi|225464130|ref|XP_002264979.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Vitis vinifera]
Length = 271
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K L+ I+G+ VFFG DFITVTK DD W +KPEIFA IMDF
Sbjct: 96 SADFPNSRSAMSSPLAKSLYGIDGITRVFFGSDFITVTKSDD-ASWDFIKPEIFAAIMDF 154
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D+ ++ DT IHEDD ETV MIKELL+TRIRP VQ+DGGDI++ F +
Sbjct: 155 YSSGKPLFLDSNTAAAMDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDPET 214
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 215 GIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPE 249
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 185 MIKELLETRIRPAVQDDGGDIEYRGF 210
>gi|308492754|ref|XP_003108567.1| CRE-LPD-8 protein [Caenorhabditis remanei]
gi|308248307|gb|EFO92259.1| CRE-LPD-8 protein [Caenorhabditis remanei]
Length = 223
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 116/158 (73%), Gaps = 1/158 (0%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
+L + +T DF + AA SPL L R++GVK VFFG DF+TVTK D+ VDW LL+PEI
Sbjct: 37 LLPDASKTYDFNSAAAAKQSPLAVKLLRVDGVKRVFFGEDFVTVTKADEHVDWALLRPEI 96
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
F+TI D +G PV+ + ++D +D+E V MIKE+L+TRIRP VQEDGGDI ++
Sbjct: 97 FSTIADHLQTGKPVINEV-AATDGEAEVEDNEVVMMIKEILETRIRPMVQEDGGDITYVG 155
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F GVVKLKMQGSCT CPSS VTLKNG++NML FY+PE
Sbjct: 156 FDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLTFYVPE 193
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FR 57
MIKE+L+TRIRP VQEDGGDI ++ F DGV L+ G P+ + + +L F
Sbjct: 131 MIKEILETRIRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLTFY 190
Query: 58 IEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
+ VK V I V + DD+ + LK
Sbjct: 191 VPEVKEV------IEVKDESDDLVERELK 213
>gi|42562675|ref|NP_175550.2| NifU-like protein 5 [Arabidopsis thaliana]
gi|75169527|sp|Q9C8J2.1|NIFU5_ARATH RecName: Full=NifU-like protein 5, mitochondrial; Short=AtNfu-I;
Short=AtNfu5; Flags: Precursor
gi|12325368|gb|AAG52627.1|AC024261_14 unknown protein; 90320-88994 [Arabidopsis thaliana]
gi|28207824|emb|CAD55562.1| NFU5 protein [Arabidopsis thaliana]
gi|105829764|gb|ABF74703.1| At1g51390 [Arabidopsis thaliana]
gi|110741134|dbj|BAE98660.1| hypothetical protein [Arabidopsis thaliana]
gi|332194540|gb|AEE32661.1| NifU-like protein 5 [Arabidopsis thaliana]
Length = 275
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 120/155 (77%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K +F I+GV VF+G DF+TVTK DD V W +LKP+IFA +MDF
Sbjct: 101 SADFPNSRSAMSSPLAKAIFAIDGVVRVFYGSDFVTVTKSDD-VTWDILKPDIFAVVMDF 159
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D+Q ++ DT IHEDD ETV MIKELL+TRIRP+VQ+DGGDI++ F +
Sbjct: 160 YSSGQPLFLDSQATAAKDTAIHEDDSETVAMIKELLETRIRPSVQDDGGDIEYCGFDTET 219
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKL+MQG+C+ CPSS VTLK+G++NML Y+ E
Sbjct: 220 GIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSE 254
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGV--LEEPGQTIDFPTGQAAYCSPLGKLLF 56
MIKELL+TRIRP+VQ+DGGDI++ F + G+ L G P+ S + +L
Sbjct: 190 MIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLM 249
Query: 57 R----IEGVKSVFFGHD 69
++GV+ F G +
Sbjct: 250 HYVSEVKGVEQEFDGEE 266
>gi|225707158|gb|ACO09425.1| HIRA-interacting protein 5 [Osmerus mordax]
Length = 268
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/151 (64%), Positives = 110/151 (72%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DFPT Q A CS L K LF IEGVKSVFFG DFITVTK DDDV+W +K I F
Sbjct: 90 TLDFPTPQNAECSSLAKDLFEIEGVKSVFFGPDFITVTKADDDVEWTNIKRHAVEAITKF 149
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F SG P+ T ++ EDDDE V +IKELLDTRIRPTVQEDGGD+ F F+ G VK
Sbjct: 150 FDSGAPITTGVS-HHESSHSEDDDEIVSIIKELLDTRIRPTVQEDGGDVIFKGFEDGTVK 208
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK+ GSCT CPSS VTL+NG+QNMLQFYIPE
Sbjct: 209 LKLVGSCTGCPSSSVTLRNGIQNMLQFYIPE 239
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
+IKELLDTRIRPTVQEDGGD+ F F+DG ++
Sbjct: 177 IIKELLDTRIRPTVQEDGGDVIFKGFEDGTVK 208
>gi|225707504|gb|ACO09598.1| HIRA-interacting protein 5 [Osmerus mordax]
Length = 263
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 97/151 (64%), Positives = 109/151 (72%), Gaps = 2/151 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DFPT Q A CS L K LF IEGVKSVFFG DFITVTK DDDV+W +K I F
Sbjct: 86 TLDFPTPQNAECSSLAKDLFEIEGVKSVFFGPDFITVTKADDDVEWTNIKRHAVEAITKF 145
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F SG P+ T + H +DDE V +IKELLDTRIRPTVQEDGGD+ F F+ G VK
Sbjct: 146 FDSGAPITTGVSHHESS--HSEDDEIVSIIKELLDTRIRPTVQEDGGDVIFKGFEDGTVK 203
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK+ GSCT CPSS VTL+NG+QNMLQFYIPE
Sbjct: 204 LKLVGSCTGCPSSSVTLRNGIQNMLQFYIPE 234
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
+IKELLDTRIRPTVQEDGGD+ F F+DG ++
Sbjct: 172 IIKELLDTRIRPTVQEDGGDVIFKGFEDGTVK 203
>gi|357461643|ref|XP_003601103.1| NifU-like protein [Medicago truncatula]
gi|355490151|gb|AES71354.1| NifU-like protein [Medicago truncatula]
Length = 275
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 118/155 (76%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K +F I+G+ VFFG DF+TVTK +D W+ LKPEIFA IMDF
Sbjct: 100 SADFPNPRSAMNSPLAKSIFTIDGITRVFFGSDFVTVTKSED-ASWEFLKPEIFAAIMDF 158
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D+Q +S DT IH+DD ETV MIKELL+TRIRPTVQ+DGGDI + F
Sbjct: 159 YSSGEPLFLDSQAASSKDTAIHDDDSETVAMIKELLETRIRPTVQDDGGDIVYCGFDPDT 218
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 219 GIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPE 253
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRPTVQ+DGGDI + F
Sbjct: 189 MIKELLETRIRPTVQDDGGDIVYCGF 214
>gi|297847512|ref|XP_002891637.1| hypothetical protein ARALYDRAFT_892107 [Arabidopsis lyrata subsp.
lyrata]
gi|297337479|gb|EFH67896.1| hypothetical protein ARALYDRAFT_892107 [Arabidopsis lyrata subsp.
lyrata]
Length = 274
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 120/155 (77%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K +F I+GV VFFG DF+TVTK DD V W +LKP+IFA +MDF
Sbjct: 100 SADFPNSRSAMGSPLAKAIFAIDGVVRVFFGSDFVTVTKSDD-VTWDILKPDIFAVVMDF 158
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D+Q ++ DT IHEDD ETV MIKELL+TRIRP+VQ+DGGDI++ F +
Sbjct: 159 YSSGQPLFLDSQATAAKDTAIHEDDSETVAMIKELLETRIRPSVQDDGGDIEYCGFDTET 218
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKL+MQG+C+ CPSS VTLK+G++NML Y+ E
Sbjct: 219 GIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSE 253
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGV--LEEPGQTIDFPTGQAAYCSPLGKLLF 56
MIKELL+TRIRP+VQ+DGGDI++ F + G+ L G P+ S + +L
Sbjct: 189 MIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLM 248
Query: 57 R----IEGVKSVFFGHD 69
++GV+ F G +
Sbjct: 249 HYVSEVKGVEQEFDGEE 265
>gi|209484091|gb|ACI47520.1| iron-sulfer cluster scaffold protein NFU4 [Eucalyptus grandis]
Length = 243
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 116/155 (74%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP + + S L + LF I+GV VF+G DF+TVTK DD W LLKPEIFA IMDF
Sbjct: 66 SADFPNARTSMNSALARALFGIDGVTRVFYGSDFVTVTKSDD-ASWDLLKPEIFAAIMDF 124
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D+Q +S DT IHEDD ETV MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 125 YSSGQPLFLDSQTASAMDTAIHEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDLDT 184
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKL+MQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 185 GIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVPE 219
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 155 MIKELLETRIRPAVQDDGGDIEYRGF 180
>gi|116781621|gb|ABK22181.1| unknown [Picea sitchensis]
Length = 181
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 119/155 (76%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP + A SPL K L+ I+GV +FFG DFITVTK ++ V W +LKPEIFA IMDF
Sbjct: 5 SADFPNARVAMGSPLAKSLYGIDGVARIFFGSDFITVTKSEE-VSWDILKPEIFAAIMDF 63
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D++ + DT I+EDDDETV MIKELL+TRIRP VQ+DGGDI++ F +
Sbjct: 64 YSSGQPLFLDSKSGAPTDTAINEDDDETVAMIKELLETRIRPAVQDDGGDIEYCGFDPET 123
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVVKLKMQG+C+ CPSS +TLK+G++NML Y+PE
Sbjct: 124 GVVKLKMQGACSGCPSSSLTLKSGIENMLMHYVPE 158
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 94 MIKELLETRIRPAVQDDGGDIEYCGF 119
>gi|167520450|ref|XP_001744564.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776895|gb|EDQ90513.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 119/163 (73%), Gaps = 2/163 (1%)
Query: 26 FQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLL 85
F GV PG T++ + AA+ SPL + LFR++GVKSVF DF+T+ K D+ +W L
Sbjct: 16 FYPGVDILPGSTLELTSAAAAHQSPLARALFRVDGVKSVFLASDFVTINK-DEAAEWSTL 74
Query: 86 KPEIFATIMDFFSSGLPVLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
KP I+AT+MDFF+S PV+ D+ + +DT + EDDDE V MIKELLD+RIRP VQEDGGD
Sbjct: 75 KPNIYATMMDFFASNQPVVLDSYEAPTDTAVSEDDDEIVAMIKELLDSRIRPAVQEDGGD 134
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
I F F G+V+L++ G+CT CPSS+ TLKNGV+NML YIPE
Sbjct: 135 ILFQGFVDGIVQLRLSGACTGCPSSIFTLKNGVENMLMHYIPE 177
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLLFR- 57
MIKELLD+RIRP VQEDGGDI F F DG+ L G P+ + + +L
Sbjct: 115 MIKELLDSRIRPAVQEDGGDILFQGFVDGIVQLRLSGACTGCPSSIFTLKNGVENMLMHY 174
Query: 58 ---IEGVKSVF 65
+EGV+ VF
Sbjct: 175 IPEVEGVEQVF 185
>gi|341887429|gb|EGT43364.1| CBN-LPD-8 protein [Caenorhabditis brenneri]
Length = 228
Score = 192 bits (489), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 93/159 (58%), Positives = 116/159 (72%), Gaps = 3/159 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
+L + +T DF + A SPL L R++GVK VFFG DF+TVTK D+ VDW LL+PEI
Sbjct: 42 LLPDASKTYDFSSAATAKQSPLAVKLLRVDGVKRVFFGEDFVTVTKADEHVDWALLRPEI 101
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDIQFI 148
F+TI D +G PV+ + +S HE++D E V MIKE+L+TRIRP VQEDGGDI ++
Sbjct: 102 FSTIADHLQTGKPVINEESTTSGE--HEEEDSEVVMMIKEILETRIRPMVQEDGGDITYV 159
Query: 149 SFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F GVVKLKMQGSCT CPSS VTLKNG++NML FY+PE
Sbjct: 160 GFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLTFYVPE 198
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 49/89 (55%), Gaps = 9/89 (10%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FR 57
MIKE+L+TRIRP VQEDGGDI ++ F DGV L+ G P+ + + +L F
Sbjct: 136 MIKEILETRIRPMVQEDGGDITYVGFDDGVVKLKMQGSCTGCPSSGVTLKNGIENMLTFY 195
Query: 58 IEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
+ VK V I V + DD+ + LK
Sbjct: 196 VPEVKEV------IEVKDESDDLVERELK 218
>gi|224110188|ref|XP_002315442.1| predicted protein [Populus trichocarpa]
gi|222864482|gb|EEF01613.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 192 bits (488), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 118/155 (76%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K ++ I+G+ VFFG DFIT+TK DD W+ LKPEIFA IMDF
Sbjct: 104 SADFPNARSAMNSPLAKAIYGIDGINRVFFGPDFITITKSDD-ATWEFLKPEIFAAIMDF 162
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D+Q ++ DT I EDD ETV MIKELL+TRIRP VQ+DGGDI++ F +
Sbjct: 163 YSSGEPLFLDSQTAAAKDTAISEDDSETVAMIKELLETRIRPAVQDDGGDIEYQGFDEET 222
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 223 GIVKLKMQGACSGCPSSSVTLKSGIENMLMHYVPE 257
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP VQ+DGGDI++ F +
Sbjct: 193 MIKELLETRIRPAVQDDGGDIEYQGFDE 220
>gi|168061090|ref|XP_001782524.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666009|gb|EDQ52676.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 212
Score = 191 bits (486), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 92/152 (60%), Positives = 116/152 (76%), Gaps = 4/152 (2%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP +AA SPL K +F ++GV VFFG DF+TVTK +D V W +LKPEIFA IMDF++
Sbjct: 42 DFPNSRAAMASPLAKSIFIVDGVVRVFFGADFVTVTKSED-VSWDILKPEIFAAIMDFYA 100
Query: 99 SGLPVLTDAQP-SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVV 155
+ P+ D Q +SDT IHEDDDETV MIKELL+TRIRP VQ+DGGDI++ F + G+V
Sbjct: 101 TKQPLFYDTQSQASDTAIHEDDDETVAMIKELLETRIRPAVQDDGGDIEYRGFDPESGIV 160
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LKMQG+C+ CPSS VTLK+G++NML Y+ E
Sbjct: 161 SLKMQGACSGCPSSAVTLKSGIENMLMHYVSE 192
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 128 MIKELLETRIRPAVQDDGGDIEYRGF 153
>gi|242086973|ref|XP_002439319.1| hypothetical protein SORBIDRAFT_09g004310 [Sorghum bicolor]
gi|241944604|gb|EES17749.1| hypothetical protein SORBIDRAFT_09g004310 [Sorghum bicolor]
Length = 268
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 113/153 (73%), Gaps = 5/153 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP + A SPL K LF I+GV +FFG DF+TVTK ++ W LKPE+FA IMDF+S
Sbjct: 99 DFPNARTAMTSPLAKALFAIDGVTRIFFGSDFVTVTKSEE-TSWDYLKPEVFAAIMDFYS 157
Query: 99 SGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SG P+ D A S DT IHEDD E V MIKELL+TRIRP VQ+DGGDI++ F + G+
Sbjct: 158 SGQPLFLDSNAAASMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPENGI 217
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 218 VKLKMQGACSGCPSSSVTLKSGIENMLMHYVPE 250
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 29/34 (85%), Gaps = 2/34 (5%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGVLE 32
MIKELL+TRIRP VQ+DGGDI++ F ++G+++
Sbjct: 186 MIKELLETRIRPAVQDDGGDIEYRGFDPENGIVK 219
>gi|357134577|ref|XP_003568893.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Brachypodium
distachyon]
Length = 268
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 114/153 (74%), Gaps = 5/153 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP + A SPL K LF I+GV VFFG DF+TVTK D+ W LKPEIFA IMDF+S
Sbjct: 96 DFPNVRTAMTSPLAKALFAIDGVTRVFFGSDFVTVTKSDE-TSWDYLKPEIFAAIMDFYS 154
Query: 99 SGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SG P+ D+ ++ DT IHEDD E V MIKELL+TRIRP VQ+DGGDI++ F + G+
Sbjct: 155 SGQPLFLDSNTAAAMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGI 214
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 215 VKLKMQGACSGCPSSSVTLKSGIENMLMHYVPE 247
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 183 MIKELLETRIRPAVQDDGGDIEYRGF 208
>gi|148697451|gb|EDL29398.1| mCG14627 [Mus musculus]
Length = 181
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/149 (61%), Positives = 118/149 (79%), Gaps = 1/149 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DF T AA+ SPL + LFRIEGVKSVFFG DFITVTK++ ++DW LLKP+I ATIMD
Sbjct: 26 RTMDFSTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENGELDWNLLKPDIHATIMD 85
Query: 96 FFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
FF+SGLP++T + P E+DD V MIKELLDTRIRPTVQEDGGD+ + +F+ G+
Sbjct: 86 FFASGLPLVTEETPPPPGEAGSEEDDGVVAMIKELLDTRIRPTVQEDGGDVIYRAFEDGI 145
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQF 183
V+LK+QGSC SCPSS++TLK+G++ F
Sbjct: 146 VRLKLQGSCPSCPSSIITLKSGIRTCCSF 174
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + +F+DG++
Sbjct: 116 MIKELLDTRIRPTVQEDGGDVIYRAFEDGIVR 147
>gi|198427432|ref|XP_002130447.1| PREDICTED: similar to NFU1 iron-sulfur cluster scaffold homolog (S.
cerevisiae) [Ciona intestinalis]
Length = 284
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/154 (66%), Positives = 127/154 (82%), Gaps = 3/154 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFP + +Y SPL K LF IEGVK+VF G DF+TVT+QD++V WK+LKPEI++ +MDF
Sbjct: 98 TADFPDWKNSYKSPLAKRLFGIEGVKAVFLGPDFLTVTRQDEEVQWKVLKPEIYSLVMDF 157
Query: 97 FSSG-LPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGG 153
F++G +PVLTD PS+DTV+ EDDDE V M+KELLDTRIRPTV EDGGDI F F + G
Sbjct: 158 FTAGNIPVLTDEGPSADTVVDEDDDEIVAMVKELLDTRIRPTVMEDGGDIIFKGFDPETG 217
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLK+QGSC++CPSS VTLK+G++NML+FYIPE
Sbjct: 218 SVKLKLQGSCSNCPSSSVTLKSGIENMLKFYIPE 251
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/26 (80%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
M+KELLDTRIRPTV EDGGDI F F
Sbjct: 187 MVKELLDTRIRPTVMEDGGDIIFKGF 212
>gi|18402817|ref|NP_566673.1| NifU-like protein 4 [Arabidopsis thaliana]
gi|75273382|sp|Q9LIG6.1|NIFU4_ARATH RecName: Full=NifU-like protein 4, mitochondrial; Short=AtNfu-III;
Short=AtNfu4; Flags: Precursor
gi|13899085|gb|AAK48964.1|AF370537_1 Unknown protein [Arabidopsis thaliana]
gi|9294004|dbj|BAB01907.1| unnamed protein product [Arabidopsis thaliana]
gi|18377516|gb|AAL66924.1| unknown protein [Arabidopsis thaliana]
gi|28207822|emb|CAD55561.1| NFU4 protein [Arabidopsis thaliana]
gi|332642927|gb|AEE76448.1| NifU-like protein 4 [Arabidopsis thaliana]
Length = 283
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 118/155 (76%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K ++ I+GV VFFG DF+TVTK DD V W +LKPEIFA +MDF
Sbjct: 106 SADFPNVRSALGSPLAKSIYSIDGVVRVFFGSDFVTVTKSDD-VSWDILKPEIFAAVMDF 164
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D+Q ++ DT I EDD ETV MIKELL+TRIRP VQ+DGGDI++ F +
Sbjct: 165 YSSGQPLFLDSQAAAAKDTAISEDDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPES 224
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKL+MQG+C+ CPSS VTLK+G++NML Y+ E
Sbjct: 225 GIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSE 259
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGV--LEEPGQTIDFPTGQAAYCSPLGKLLF 56
MIKELL+TRIRP VQ+DGGDI++ F + G+ L G P+ S + +L
Sbjct: 195 MIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLM 254
Query: 57 R----IEGVKSVFFGHD 69
++GV+ F G D
Sbjct: 255 HYVSEVKGVEQEFDGED 271
>gi|224097626|ref|XP_002311017.1| predicted protein [Populus trichocarpa]
gi|222850837|gb|EEE88384.1| predicted protein [Populus trichocarpa]
Length = 198
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K ++ I+G+ VFFG DF+TVTK DD W+ L+PEIFA IMDF
Sbjct: 30 SADFPNARSAMNSPLAKSIYEIDGITRVFFGSDFVTVTKSDD-ASWEFLEPEIFAAIMDF 88
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D++ +S DT I EDD ETV MIKELL+TRIRP VQ+DGGDI++ F +
Sbjct: 89 YSSGEPLFQDSKTASAKDTAISEDDSETVTMIKELLETRIRPAVQDDGGDIEYRGFDEET 148
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVVKL MQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 149 GVVKLTMQGACSGCPSSSVTLKSGIENMLMHYVPE 183
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP VQ+DGGDI++ F +
Sbjct: 119 MIKELLETRIRPAVQDDGGDIEYRGFDE 146
>gi|413948796|gb|AFW81445.1| hypothetical protein ZEAMMB73_536097 [Zea mays]
Length = 268
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 112/153 (73%), Gaps = 5/153 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP + A SPL K LF I+GV VFFG DF+TVTK ++ W LKPE+FA IMDF+S
Sbjct: 99 DFPNARTAMTSPLAKSLFAIDGVTRVFFGSDFVTVTKSEE-TSWDCLKPEVFAAIMDFYS 157
Query: 99 SGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SG P+ D A S DT IHEDD E V MIKELL+TRIRP VQ+DGGDI++ F + G
Sbjct: 158 SGQPLFLDSNAAASMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGT 217
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 218 VKLKMQGACSGCPSSSVTLKSGIENMLMHYVPE 250
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 186 MIKELLETRIRPAVQDDGGDIEYRGF 211
>gi|413948795|gb|AFW81444.1| hypothetical protein ZEAMMB73_536097 [Zea mays]
Length = 276
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 112/153 (73%), Gaps = 5/153 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP + A SPL K LF I+GV VFFG DF+TVTK ++ W LKPE+FA IMDF+S
Sbjct: 99 DFPNARTAMTSPLAKSLFAIDGVTRVFFGSDFVTVTK-SEETSWDCLKPEVFAAIMDFYS 157
Query: 99 SGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SG P+ D A S DT IHEDD E V MIKELL+TRIRP VQ+DGGDI++ F + G
Sbjct: 158 SGQPLFLDSNAAASMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGT 217
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 218 VKLKMQGACSGCPSSSVTLKSGIENMLMHYVPE 250
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 186 MIKELLETRIRPAVQDDGGDIEYRGF 211
>gi|356576863|ref|XP_003556549.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Glycine max]
Length = 267
Score = 189 bits (480), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 116/153 (75%), Gaps = 5/153 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP ++A SPL K LF I+GV VFFG DF+TVTK ++ W+ LKPE+FA IMDF+S
Sbjct: 94 DFPNPRSAMNSPLAKSLFAIDGVTRVFFGSDFVTVTK-SEEAAWEFLKPEVFAAIMDFYS 152
Query: 99 SGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
S P+ D+Q ++ DT IH+DD ETV MIKELL+TRIRP VQ+DGGDI++ F G+
Sbjct: 153 SAQPLFLDSQAAAAMDTAIHQDDSETVAMIKELLETRIRPAVQDDGGDIEYRGFDLDTGI 212
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKL+MQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 213 VKLRMQGACSGCPSSSVTLKSGIENMLMHYVPE 245
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 181 MIKELLETRIRPAVQDDGGDIEYRGF 206
>gi|410901244|ref|XP_003964106.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Takifugu rubripes]
Length = 232
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/151 (63%), Positives = 111/151 (73%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DFP+ +A CS L + LF IEGVKSVFFG DFITVTK D+DVDW +K + I F
Sbjct: 55 TLDFPSPSSAGCSTLARDLFEIEGVKSVFFGPDFITVTKTDEDVDWIGIKHHVSEAIAKF 114
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F SG P+ T +++ EDDD+ V MIKELLDTRIRPTVQEDGGD+ F F G VK
Sbjct: 115 FESGDPITTGVV-YNESSHSEDDDDIVSMIKELLDTRIRPTVQEDGGDVIFKGFDSGTVK 173
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK+ GSCT CPSS VTLKNG+QNMLQFYIPE
Sbjct: 174 LKLVGSCTGCPSSTVTLKNGIQNMLQFYIPE 204
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 26/32 (81%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ F F G ++
Sbjct: 142 MIKELLDTRIRPTVQEDGGDVIFKGFDSGTVK 173
>gi|388520403|gb|AFK48263.1| unknown [Medicago truncatula]
Length = 275
Score = 189 bits (479), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/155 (60%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K +F I+G+ VFFG DF+TVTK +D W+ LKPEIFA IMDF
Sbjct: 100 SADFPNPRSAMNSPLAKSIFTIDGITRVFFGSDFVTVTKSED-ASWEFLKPEIFAAIMDF 158
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D+Q +S DT IH+DD ETV MIKELL+TRIRPTVQ+DGGDI + F
Sbjct: 159 YSSGEPLFLDSQAASSKDTAIHDDDSETVAMIKELLETRIRPTVQDDGGDIVYCGFDPDT 218
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLKMQG+C+ PSS VTLK+G++NML Y+PE
Sbjct: 219 GIVKLKMQGACSGRPSSSVTLKSGIENMLMHYVPE 253
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRPTVQ+DGGDI + F
Sbjct: 189 MIKELLETRIRPTVQDDGGDIVYCGF 214
>gi|302769472|ref|XP_002968155.1| hypothetical protein SELMODRAFT_67451 [Selaginella moellendorffii]
gi|300163799|gb|EFJ30409.1| hypothetical protein SELMODRAFT_67451 [Selaginella moellendorffii]
Length = 187
Score = 188 bits (478), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/153 (59%), Positives = 116/153 (75%), Gaps = 5/153 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP + A SPL K LF I+GV VFFG DF+TVTK DD +W +LKPE+FA IMDF++
Sbjct: 34 DFPNARTAMKSPLAKSLFGIDGVTRVFFGSDFVTVTKSDD-TEWDVLKPEVFAAIMDFYA 92
Query: 99 SGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SG P+ AQ ++ DT I E DDETV MIKELL+TRIRP V++DGGDI++ F + G+
Sbjct: 93 SGQPLFYSAQAAAPKDTAIEEGDDETVVMIKELLETRIRPAVKDDGGDIEYRGFDRESGI 152
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 153 VELKMQGACSGCPSSAVTLKSGIENMLMHYVPE 185
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 28/34 (82%), Gaps = 2/34 (5%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGVLE 32
MIKELL+TRIRP V++DGGDI++ F + G++E
Sbjct: 121 MIKELLETRIRPAVKDDGGDIEYRGFDRESGIVE 154
>gi|452821254|gb|EME28287.1| putative iron-sulfur cluster scaffold protein [Galdieria
sulphuraria]
Length = 299
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 98/188 (52%), Positives = 131/188 (69%), Gaps = 7/188 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGV 61
+K L + +PT D ++F+ ++ V E ++DFP Q+A SPL K LFRIEG+
Sbjct: 79 LKRSLFLQSQPTPNPDS--VKFLPGREVVPNE--ASVDFPNAQSAQISPLAKRLFRIEGI 134
Query: 62 KSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDE 121
SVF G DF+TVTK++D V W +L+PEIF I++F+SS PVL + P SDT I +DDE
Sbjct: 135 SSVFLGPDFVTVTKRED-VSWSVLRPEIFEAILEFYSSEEPVLLGSLPESDTTIRPEDDE 193
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQN 179
V MIKELL+TRI+P V EDGG+I + + G+V L++QGSCT+C SSVVTLK+GV+N
Sbjct: 194 VVAMIKELLETRIKPAVAEDGGNILYRGYNPDTGIVDLELQGSCTTCSSSVVTLKSGVEN 253
Query: 180 MLQFYIPE 187
ML YIPE
Sbjct: 254 MLMHYIPE 261
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQ 27
MIKELL+TRI+P V EDGG+I + +
Sbjct: 197 MIKELLETRIKPAVAEDGGNILYRGYN 223
>gi|213512278|ref|NP_001134266.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial [Salmo
salar]
gi|209731958|gb|ACI66848.1| NFU1 iron-sulfur cluster scaffold homolog [Salmo salar]
Length = 263
Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/151 (62%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DFP+ +A CS L + LF IEGVKSVF+G DFITVTK DDDV+W +K I F
Sbjct: 85 TLDFPSPSSAECSSLARDLFGIEGVKSVFYGPDFITVTKADDDVEWTDIKHHAMDAITKF 144
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F SG P+ T ++ EDDDE V MIKELLDTRIRPTV EDGGD+ F F+ G VK
Sbjct: 145 FDSGDPITTGVT-HHESSHSEDDDEIVSMIKELLDTRIRPTVMEDGGDVIFKGFENGTVK 203
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK+ GSCT CPSS VTLKNG+QNMLQFYIPE
Sbjct: 204 LKLVGSCTGCPSSTVTLKNGIQNMLQFYIPE 234
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 27/32 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTV EDGGD+ F F++G ++
Sbjct: 172 MIKELLDTRIRPTVMEDGGDVIFKGFENGTVK 203
>gi|302832552|ref|XP_002947840.1| hypothetical protein VOLCADRAFT_88148 [Volvox carteri f.
nagariensis]
gi|300266642|gb|EFJ50828.1| hypothetical protein VOLCADRAFT_88148 [Volvox carteri f.
nagariensis]
Length = 314
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F + + SPL K LF I+G+ SVFFG DF+TVTK+DD W +LKP+IFA IMDF
Sbjct: 108 TLEFSSAREGMKSPLAKKLFAIDGITSVFFGSDFVTVTKRDD-FTWPVLKPDIFAAIMDF 166
Query: 97 FSSGLPVLTDAQP--SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--G 152
+SSG P+++DA SSDT IH DD E V MIKELL+TRIRP VQEDGGDI + F+
Sbjct: 167 YSSGEPLVSDAAALASSDTAIHPDDSEVVAMIKELLETRIRPAVQEDGGDIVYKGFEEDT 226
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V +K+ G+C++CPSS VTLKNG++NML YIPE
Sbjct: 227 GMVMVKLVGACSTCPSSTVTLKNGIENMLMHYIPE 261
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP VQEDGGDI + F++
Sbjct: 197 MIKELLETRIRPAVQEDGGDIVYKGFEE 224
>gi|125550903|gb|EAY96612.1| hypothetical protein OsI_18522 [Oryza sativa Indica Group]
Length = 272
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/153 (59%), Positives = 112/153 (73%), Gaps = 5/153 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP + A SPL K LF I+GV VFFG DF+TVTK ++ W LKPE+FA IMDF+S
Sbjct: 100 DFPNARTAMTSPLAKALFAIDGVTRVFFGSDFVTVTKSEE-TSWDYLKPEVFAAIMDFYS 158
Query: 99 SGLPVLTDAQ--PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SG + D+ S DT IHEDD E V MIKELL+TRIRP VQ+DGGDI++ F + G+
Sbjct: 159 SGQSLFLDSSTAASMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGI 218
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 219 VKLKMQGACSGCPSSSVTLKSGIENMLMHYVPE 251
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 187 MIKELLETRIRPAVQDDGGDIEYRGF 212
>gi|348528951|ref|XP_003451979.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Oreochromis niloticus]
Length = 271
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/151 (61%), Positives = 111/151 (73%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DFP+ +A CS L + LF IEGV+SVFFG DFITVTK D+DV+W +K I F
Sbjct: 85 TLDFPSPSSAGCSSLARDLFEIEGVQSVFFGPDFITVTKTDEDVEWTDIKRHALEAIAKF 144
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F SG P+ A ++ EDDD+ V +IKELLDTRIRPTVQEDGGD+ F F+ GVVK
Sbjct: 145 FESGEPITIGAV-HHESSHSEDDDDIVSIIKELLDTRIRPTVQEDGGDVIFKGFENGVVK 203
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK+ GSCT CPSS VTLKNG+QNM+QFYIPE
Sbjct: 204 LKLVGSCTGCPSSTVTLKNGIQNMMQFYIPE 234
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
+IKELLDTRIRPTVQEDGGD+ F F++GV++
Sbjct: 172 IIKELLDTRIRPTVQEDGGDVIFKGFENGVVK 203
>gi|302773942|ref|XP_002970388.1| hypothetical protein SELMODRAFT_93100 [Selaginella moellendorffii]
gi|300161904|gb|EFJ28518.1| hypothetical protein SELMODRAFT_93100 [Selaginella moellendorffii]
Length = 210
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/158 (58%), Positives = 116/158 (73%), Gaps = 5/158 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP + A SPL K LF I+GV VFFG DF+TVTK DD +W +LKPE+FA IMDF++
Sbjct: 38 DFPNARTAMKSPLAKSLFGIDGVTRVFFGSDFVTVTKSDD-TEWDVLKPEVFAAIMDFYA 96
Query: 99 SGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SG P+ AQ + DT I E DDETV MIKELL+TRIRP V++DGGDI++ F + G+
Sbjct: 97 SGQPLFYSAQVEAPKDTAIEEGDDETVVMIKELLETRIRPAVKDDGGDIEYRGFDRESGI 156
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGL 192
V+LKMQG+C+ CPSS VTLK+G++NML Y+PE G
Sbjct: 157 VELKMQGACSGCPSSAVTLKSGIENMLMHYVPEVKIGF 194
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 28/34 (82%), Gaps = 2/34 (5%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGVLE 32
MIKELL+TRIRP V++DGGDI++ F + G++E
Sbjct: 125 MIKELLETRIRPAVKDDGGDIEYRGFDRESGIVE 158
>gi|239047306|ref|NP_001131382.2| uncharacterized protein LOC100192708 [Zea mays]
gi|238908578|gb|ACF79773.2| unknown [Zea mays]
Length = 268
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 111/153 (72%), Gaps = 5/153 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP + A SPL K F I+GV VFFG DF+TVTK ++ W LKPE+FA IMDF+S
Sbjct: 99 DFPNARTAMTSPLAKSPFAIDGVTRVFFGSDFVTVTKSEE-TSWDCLKPEVFAAIMDFYS 157
Query: 99 SGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SG P+ D A S DT IHEDD E V MIKELL+TRIRP VQ+DGGDI++ F + G
Sbjct: 158 SGQPLFLDSNAAASMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGT 217
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 218 VKLKMQGACSGCPSSSVTLKSGIENMLMHYVPE 250
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 186 MIKELLETRIRPAVQDDGGDIEYRGF 211
>gi|449446277|ref|XP_004140898.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Cucumis
sativus]
gi|449494166|ref|XP_004159467.1| PREDICTED: nifU-like protein 4, mitochondrial-like [Cucumis
sativus]
Length = 273
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 116/155 (74%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K L+ ++GV VFFG DF+TVTK +D W LKPEIFA IMDF
Sbjct: 98 SADFPNARSAMNSPLAKALYGVDGVVRVFFGSDFVTVTKSND-ASWDFLKPEIFAAIMDF 156
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D++ ++ DT I EDD ETV MIKELL+TRIRP VQ+DGGDI++ + +
Sbjct: 157 YSSGQPLFLDSKTAAAMDTAIKEDDSETVAMIKELLETRIRPAVQDDGGDIEYRGYNEET 216
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V L+MQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 217 GIVTLRMQGACSGCPSSSVTLKSGIENMLMHYVPE 251
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP VQ+DGGDI++ + +
Sbjct: 187 MIKELLETRIRPAVQDDGGDIEYRGYNE 214
>gi|115462181|ref|NP_001054690.1| Os05g0155300 [Oryza sativa Japonica Group]
gi|54291852|gb|AAV32220.1| unknown protein [Oryza sativa Japonica Group]
gi|113578241|dbj|BAF16604.1| Os05g0155300 [Oryza sativa Japonica Group]
gi|215697325|dbj|BAG91319.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630253|gb|EEE62385.1| hypothetical protein OsJ_17174 [Oryza sativa Japonica Group]
Length = 272
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/153 (59%), Positives = 112/153 (73%), Gaps = 5/153 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP + A SPL K LF I+GV VFFG DF+TVTK ++ W LKPE+FA IMDF+S
Sbjct: 100 DFPNARTAMTSPLAKALFAIDGVTRVFFGSDFVTVTKSEE-TSWDYLKPEVFAVIMDFYS 158
Query: 99 SGLPVLTDAQ--PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SG + D+ S DT IHEDD E V MIKELL+TRIRP VQ+DGGDI++ F + G+
Sbjct: 159 SGQSLFLDSSTAASMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGFDPETGI 218
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQG+C+ CPSS VTLK+G++NML Y+PE
Sbjct: 219 VKLKMQGACSGCPSSSVTLKSGIENMLMHYVPE 251
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 187 MIKELLETRIRPAVQDDGGDIEYRGF 212
>gi|325303172|tpg|DAA34414.1| TPA_inf: NifU-like domain-containing protein [Amblyomma variegatum]
Length = 217
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/146 (64%), Positives = 111/146 (76%), Gaps = 4/146 (2%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFP +A SPL + LFR+EGVK+VF G DFITVTK DD+ +WK++KP IFA IMDF
Sbjct: 72 TRDFPNIGSAKNSPLARHLFRVEGVKAVFLGPDFITVTKVDDETEWKVIKPHIFAAIMDF 131
Query: 97 FSSGLPVLTDA----QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
F++GLPVL D Q S DT E D ETV IKEL++TRIRPTVQEDGGDI ++ F+
Sbjct: 132 FTTGLPVLDDGSASTQVSEDTQPREGDSETVLAIKELIETRIRPTVQEDGGDILYMGFED 191
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQ 178
GVVKLK+QGSCT CPSS VTLK G+Q
Sbjct: 192 GVVKLKLQGSCTGCPSSSVTLKAGIQ 217
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 29/31 (93%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKEL++TRIRPTVQEDGGDI ++ F+DGV++
Sbjct: 165 IKELIETRIRPTVQEDGGDILYMGFEDGVVK 195
>gi|62202252|gb|AAH92870.1| Zgc:110319 [Danio rerio]
gi|182890178|gb|AAI64833.1| Zgc:110319 [Danio rerio]
Length = 256
Score = 186 bits (471), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 92/151 (60%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFPT +A SPL + LF+I G+KSVF+G DFIT+TK DDDV+W +K I F
Sbjct: 78 TQDFPTSASAESSPLARDLFQISGIKSVFYGPDFITLTKTDDDVEWTDIKRHAIEVIRKF 137
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F G + T A + +V EDDDE V +IKELLDTRIRPTVQEDGGD+ F F+ G VK
Sbjct: 138 FEGGEAITTGAAHAESSVT-EDDDEIVSLIKELLDTRIRPTVQEDGGDVIFKGFEDGTVK 196
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK+ GSCT CPSS VTLKNG+QNM+QFYIPE
Sbjct: 197 LKLVGSCTGCPSSTVTLKNGIQNMMQFYIPE 227
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
+IKELLDTRIRPTVQEDGGD+ F F+DG ++
Sbjct: 165 LIKELLDTRIRPTVQEDGGDVIFKGFEDGTVK 196
>gi|213624625|gb|AAI71359.1| Zgc:110319 [Danio rerio]
Length = 256
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/151 (60%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFPT +A SPL + LF+I G+KSVF+G DFIT+TK DDDV+W +K I F
Sbjct: 78 TQDFPTSASAESSPLARDLFQISGIKSVFYGPDFITLTKTDDDVEWTDIKRHAIEVIRKF 137
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F G + T A + +V EDDDE V +IKELLDTRIRPTVQEDGGD+ F F+ G VK
Sbjct: 138 FEGGEAITTGAAHAESSVT-EDDDEIVSLIKELLDTRIRPTVQEDGGDVIFKGFEDGTVK 196
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK+ GSCT CPSS VTLKNG+QNM+QFYIPE
Sbjct: 197 LKLVGSCTGCPSSTVTLKNGIQNMMQFYIPE 227
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
+IKELLDTRIRPTVQEDGGD+ F F+DG ++
Sbjct: 165 LIKELLDTRIRPTVQEDGGDVIFKGFEDGTVK 196
>gi|41351250|gb|AAH65889.1| Zgc:110319 protein [Danio rerio]
Length = 255
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/151 (60%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFPT +A SPL + LF+I G+KSVF+G DFIT+TK DDDV+W +K I F
Sbjct: 77 TQDFPTSASAESSPLARDLFQISGIKSVFYGPDFITLTKTDDDVEWTDIKRHAIEVISKF 136
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F G + T A + +V EDDDE V +IKELLDTRIRPTVQEDGGD+ F F+ G VK
Sbjct: 137 FEGGEAITTGAAHAESSVT-EDDDEIVSLIKELLDTRIRPTVQEDGGDVIFKGFEDGTVK 195
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK+ GSCT CPSS VTLKNG+QNM+QFYIPE
Sbjct: 196 LKLVGSCTGCPSSTVTLKNGIQNMMQFYIPE 226
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
+IKELLDTRIRPTVQEDGGD+ F F+DG ++
Sbjct: 164 LIKELLDTRIRPTVQEDGGDVIFKGFEDGTVK 195
>gi|324120927|ref|NP_001018093.2| NFU1 iron-sulfur cluster scaffold homolog [Danio rerio]
Length = 256
Score = 185 bits (469), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 92/151 (60%), Positives = 109/151 (72%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFPT +A SPL + LF+I G+KSVF+G DFIT+TK DDDV+W +K I F
Sbjct: 78 TQDFPTSASAESSPLARDLFQISGIKSVFYGPDFITLTKTDDDVEWTDIKRHAIEVISKF 137
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F G + T A + +V EDDDE V +IKELLDTRIRPTVQEDGGD+ F F+ G VK
Sbjct: 138 FEGGEAITTGAAHAESSVT-EDDDEIVSLIKELLDTRIRPTVQEDGGDVIFKGFEDGTVK 196
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK+ GSCT CPSS VTLKNG+QNM+QFYIPE
Sbjct: 197 LKLVGSCTGCPSSTVTLKNGIQNMMQFYIPE 227
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
+IKELLDTRIRPTVQEDGGD+ F F+DG ++
Sbjct: 165 LIKELLDTRIRPTVQEDGGDVIFKGFEDGTVK 196
>gi|328773127|gb|EGF83164.1| hypothetical protein BATDEDRAFT_9276 [Batrachochytrium
dendrobatidis JAM81]
Length = 225
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/178 (53%), Positives = 124/178 (69%), Gaps = 5/178 (2%)
Query: 16 EDGGDIQFISFQDGVLEEP---GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFIT 72
E ++ + F+ G L P T +F + + A SPL LFRI+GVKSV FG D IT
Sbjct: 14 ESTPNLDSLKFKPGKLVLPEGTTSTREFISAREAMQSPLASTLFRIDGVKSVLFGKDVIT 73
Query: 73 VTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA-QPSSDTVIHEDDDETVQMIKELLD 131
V K D V W ++KP+IF IMDF+SSG+P+ A + +DT+I +D ETV MIKELLD
Sbjct: 74 VNKSPD-VAWSIIKPDIFGAIMDFYSSGVPLFKVAFEGPTDTMILPEDSETVAMIKELLD 132
Query: 132 TRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
TRIRPT+QEDGGDI+++ F G V+LK++G+C +C SSVVTLKNG++NML YIPE T
Sbjct: 133 TRIRPTIQEDGGDIEYMGFVNGAVRLKLRGACRTCDSSVVTLKNGIENMLMHYIPEVT 190
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPT+QEDGGDI+++ F +G +
Sbjct: 126 MIKELLDTRIRPTIQEDGGDIEYMGFVNGAVR 157
>gi|312070286|ref|XP_003138076.1| hypothetical protein LOAG_02490 [Loa loa]
Length = 220
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 113/155 (72%), Gaps = 3/155 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DF +A SPL LFRI GVKSVFFG D++T+TKQ++ DW LLKPEIFA +MD+
Sbjct: 29 TLDFGNFLSAKRSPLAMELFRINGVKSVFFGEDYVTITKQNEVDDWALLKPEIFAVLMDY 88
Query: 97 FSSGLPVLTDAQ---PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
S P++++ + DT IH +D +TV MIKELL+ RI+P VQEDGGD+ + F G
Sbjct: 89 LQSEKPIISEGEMPKGPEDTEIHPEDSDTVAMIKELLECRIKPMVQEDGGDVIYKGFHDG 148
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
VV LKMQGSCT CPSS VTL+ G++NMLQFY+PE
Sbjct: 149 VVHLKMQGSCTGCPSSSVTLQFGIKNMLQFYVPEV 183
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+ RI+P VQEDGGD+ + F DGV+
Sbjct: 120 MIKELLECRIKPMVQEDGGDVIYKGFHDGVVH 151
>gi|393911168|gb|EFO25989.2| hypothetical protein LOAG_02490 [Loa loa]
Length = 251
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/155 (57%), Positives = 113/155 (72%), Gaps = 3/155 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DF +A SPL LFRI GVKSVFFG D++T+TKQ++ DW LLKPEIFA +MD+
Sbjct: 60 TLDFGNFLSAKRSPLAMELFRINGVKSVFFGEDYVTITKQNEVDDWALLKPEIFAVLMDY 119
Query: 97 FSSGLPVLTDAQPSS---DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
S P++++ + DT IH +D +TV MIKELL+ RI+P VQEDGGD+ + F G
Sbjct: 120 LQSEKPIISEGEMPKGPEDTEIHPEDSDTVAMIKELLECRIKPMVQEDGGDVIYKGFHDG 179
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
VV LKMQGSCT CPSS VTL+ G++NMLQFY+PE
Sbjct: 180 VVHLKMQGSCTGCPSSSVTLQFGIKNMLQFYVPEV 214
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+ RI+P VQEDGGD+ + F DGV+
Sbjct: 151 MIKELLECRIKPMVQEDGGDVIYKGFHDGVVH 182
>gi|402592483|gb|EJW86411.1| HIRA-interacting protein 5 [Wuchereria bancrofti]
Length = 220
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 89/154 (57%), Positives = 113/154 (73%), Gaps = 3/154 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DF +A SPL LFRI GVKSVFFG D++T+TKQ + DW LLKPEIFA +MD+
Sbjct: 29 TLDFGNFMSAKRSPLAMELFRINGVKSVFFGEDYVTITKQKEIDDWTLLKPEIFAVLMDY 88
Query: 97 FSSGLPVLTDAQP---SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
S P++ +++ DT IH +D +TV MIKELL+ RI+P VQEDGGD+ + F G
Sbjct: 89 LQSEKPIVNESETLKGPEDTEIHPEDSDTVAMIKELLECRIKPMVQEDGGDVIYRGFLDG 148
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VV LKMQGSCT CPSS VTL++G++NMLQFY+PE
Sbjct: 149 VVHLKMQGSCTGCPSSSVTLQSGIKNMLQFYVPE 182
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FR 57
MIKELL+ RI+P VQEDGGD+ + F DGV L+ G P+ S + +L F
Sbjct: 120 MIKELLECRIKPMVQEDGGDVIYRGFLDGVVHLKMQGSCTGCPSSSVTLQSGIKNMLQFY 179
Query: 58 IEGVKSVF 65
+ VK V
Sbjct: 180 VPEVKDVM 187
>gi|170593029|ref|XP_001901267.1| r10h10-like protein TO42 [Brugia malayi]
gi|158591334|gb|EDP29947.1| r10h10-like protein TO42, putative [Brugia malayi]
Length = 220
Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 88/155 (56%), Positives = 113/155 (72%), Gaps = 3/155 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DF +A SPL LFRI G+KSVFFG D++T+TKQ + DW LLKPEIFA +MD+
Sbjct: 29 TLDFGNFMSAKKSPLAMELFRINGIKSVFFGEDYVTITKQKEIDDWTLLKPEIFAVLMDY 88
Query: 97 FSSGLPVLTDAQ---PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
S P++ +++ DT IH +D +TV MIKELL+ RI+P VQEDGGD+ + F G
Sbjct: 89 LQSEKPIVNESEMLKGPEDTEIHPEDSDTVAMIKELLECRIKPMVQEDGGDVIYKGFLDG 148
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
VV LKMQGSCT CPSS VTL++G++NMLQFY+PE
Sbjct: 149 VVHLKMQGSCTGCPSSSVTLQSGIKNMLQFYVPEV 183
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FR 57
MIKELL+ RI+P VQEDGGD+ + F DGV L+ G P+ S + +L F
Sbjct: 120 MIKELLECRIKPMVQEDGGDVIYKGFLDGVVHLKMQGSCTGCPSSSVTLQSGIKNMLQFY 179
Query: 58 IEGVKSVF 65
+ VK V
Sbjct: 180 VPEVKDVM 187
>gi|358334501|dbj|GAA52967.1| NFU1 iron-sulfur cluster scaffold homolog mitochondrial [Clonorchis
sinensis]
Length = 213
Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 97/151 (64%), Positives = 124/151 (82%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
TIDFP+ S L + LFRIEGV+ VFFG DFIT+TK+D+ +DW ++KPE+F IMD+
Sbjct: 27 TIDFPSIVHTGSSQLARQLFRIEGVERVFFGPDFITITKKDE-LDWNVIKPEVFGVIMDY 85
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
++SGLP++++ P+ T ++DETV MIKELLDTRIRPTVQEDGGDI ++ F+ G+V+
Sbjct: 86 YASGLPIVSEDTPTDQTDGEVEEDETVMMIKELLDTRIRPTVQEDGGDIIYVGFKDGIVR 145
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK+QGSC+SCPSSVVTLKNGVQNMLQFYIPE
Sbjct: 146 LKLQGSCSSCPSSVVTLKNGVQNMLQFYIPE 176
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 29/31 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELLDTRIRPTVQEDGGDI ++ F+DG++
Sbjct: 114 MIKELLDTRIRPTVQEDGGDIIYVGFKDGIV 144
>gi|384497647|gb|EIE88138.1| hypothetical protein RO3G_12849 [Rhizopus delemar RA 99-880]
Length = 241
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 88/153 (57%), Positives = 116/153 (75%), Gaps = 3/153 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ +F +++ SPL K LF+IEG+ VFFG DFIT++K D +W+L+KPEI+A IMD
Sbjct: 85 SAEFLDVRSSMKSPLAKQLFQIEGIAGVFFGPDFITISK-DATGEWQLMKPEIYAAIMDH 143
Query: 97 FSSGLPVLTDAQ--PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
F+SG P++ D Q +SDT I DD E VQMIKELLDTRIRP++QEDGGDI++ F+ G+
Sbjct: 144 FASGQPIVYDDQDLATSDTTILPDDPEEVQMIKELLDTRIRPSIQEDGGDIEYCGFENGI 203
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLK++GSC C S+ VTLKNG++NML YIPE
Sbjct: 204 VKLKLKGSCRGCDSATVTLKNGIENMLMHYIPE 236
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRP++QEDGGDI++ F++G+++
Sbjct: 174 MIKELLDTRIRPSIQEDGGDIEYCGFENGIVK 205
>gi|307108001|gb|EFN56242.1| hypothetical protein CHLNCDRAFT_48753 [Chlorella variabilis]
Length = 209
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 116/164 (70%), Gaps = 11/164 (6%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ + F + + A SPL K LF I+GV VFFG DF+TVTK +D W +LKP
Sbjct: 18 PGQKVLEGGSKSFTSAREAMASPLAKKLFAIDGVTQVFFGSDFVTVTKSED-YGWAVLKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQP--SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
++FA IMD +SSG + D Q +++ +IHEDDDE V MIKELL+TRIRP VQEDGGDI
Sbjct: 77 DVFAAIMDHYSSGEALFYDEQDTGAAEHMIHEDDDEVVAMIKELLETRIRPAVQEDGGDI 136
Query: 146 QFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F ++ + GVVKLKM G+C+ CPSS VTLK+G++NML YIPE
Sbjct: 137 VFRTWDPESGVVKLKMMGACSGCPSSAVTLKSGIENMLMHYIPE 180
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQEDGGDI F ++
Sbjct: 116 MIKELLETRIRPAVQEDGGDIVFRTW 141
>gi|159465189|ref|XP_001690805.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
gi|158279491|gb|EDP05251.1| iron-sulfur cluster assembly protein [Chlamydomonas reinhardtii]
Length = 319
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/155 (54%), Positives = 117/155 (75%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F + + SPL K LF ++G+ SVFFG DF+T+TK+D+ W +LKP++FA IM+F
Sbjct: 110 TMEFGSAREGMKSPLAKKLFAVDGITSVFFGSDFVTITKKDE-YSWPVLKPDVFAAIMEF 168
Query: 97 FSSGLPVLTDAQP--SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--G 152
++SG +++DA +SDT IH DD E V MIKELL+TRIRP VQEDGGDI F F+
Sbjct: 169 YASGEALISDADALAASDTAIHPDDSEVVAMIKELLETRIRPAVQEDGGDIVFKGFEEDT 228
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V++K+ G+C++CPSS VTLKNG++NML YIPE
Sbjct: 229 GMVQVKLVGACSTCPSSTVTLKNGIENMLMHYIPE 263
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP VQEDGGDI F F++
Sbjct: 199 MIKELLETRIRPAVQEDGGDIVFKGFEE 226
>gi|428171882|gb|EKX40795.1| hypothetical protein GUITHDRAFT_158274 [Guillardia theta CCMP2712]
Length = 191
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/161 (55%), Positives = 116/161 (72%), Gaps = 3/161 (1%)
Query: 38 IDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFF 97
+DFP +AA SPL K LFRI+GV SVFFG DFITVTK D W +KPE+F I+DF+
Sbjct: 1 MDFPNMKAAQKSPLAKALFRIDGVSSVFFGPDFITVTKNKDQHSWAEMKPEVFDAILDFY 60
Query: 98 SSGLPVLTDAQP-SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
+SG ++T + DT ++EDD E V MIKELLDTRIRP VQ+DGGDI FI F + G
Sbjct: 61 ASGQSIITAEEDMPQDTKVNEDDSEIVAMIKELLDTRIRPAVQDDGGDISFIGFDEETGR 120
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNME 195
V +++QG+C++C SS VTLK+GV+NML Y+PE T + +E
Sbjct: 121 VTVRLQGACSTCSSSKVTLKSGVENMLMHYVPEVTEVVAVE 161
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKELLDTRIRP VQ+DGGDI FI F EE G+ G + CS
Sbjct: 89 MIKELLDTRIRPAVQDDGGDISFIGFD----EETGRVTVRLQGACSTCS 133
>gi|326430239|gb|EGD75809.1| HIRA-interacting protein 5 [Salpingoeca sp. ATCC 50818]
Length = 269
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/152 (56%), Positives = 111/152 (73%), Gaps = 2/152 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF G SPL ++L RI+GV+ VF G DFIT++K++D VDW ++KP IF +IMDF
Sbjct: 87 TADFARGGDTSKSPLARVLLRIDGVQGVFLGPDFITISKEED-VDWGVMKPHIFGSIMDF 145
Query: 97 FSSGLPVLTDAQ-PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
F+S PVL + + ++ + E+DDE V MIKELLDTRIRP VQ+DGGDI F+ F G+V
Sbjct: 146 FASNQPVLLEGEEANAASTASEEDDEVVSMIKELLDTRIRPAVQDDGGDIIFMEFTNGIV 205
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
KLK+ G+C CPSS+ TLK GV+NML YIPE
Sbjct: 206 KLKLSGACEGCPSSMYTLKQGVENMLMHYIPE 237
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRP VQ+DGGDI F+ F +G+++
Sbjct: 175 MIKELLDTRIRPAVQDDGGDIIFMEFTNGIVK 206
>gi|255088633|ref|XP_002506239.1| predicted protein [Micromonas sp. RCC299]
gi|226521510|gb|ACO67497.1| predicted protein [Micromonas sp. RCC299]
Length = 298
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 113/159 (71%), Gaps = 5/159 (3%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
E G T +F + SPL K LF I+GV SVFFG DF+TVTK ++ +W LKPE+FA
Sbjct: 117 EEGGTKNFANPREGMASPLAKKLFLIDGVTSVFFGQDFVTVTKSEEH-EWGTLKPEVFAA 175
Query: 93 IMDFFSSGLPVLTDAQ--PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
IMD+++SG P++TD ++ T I EDDDE V MIKELL+TRIRP V EDGGDI F +
Sbjct: 176 IMDYYASGEPIITDEAELANAGTAITEDDDEIVAMIKELLETRIRPAVAEDGGDIVFKGW 235
Query: 151 QG--GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVV +KMQG+C CPSS VTLK+G++NML+ Y+PE
Sbjct: 236 NADTGVVTVKMQGACDGCPSSSVTLKSGIENMLRHYVPE 274
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 21/27 (77%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQ 27
MIKELL+TRIRP V EDGGDI F +
Sbjct: 210 MIKELLETRIRPAVAEDGGDIVFKGWN 236
>gi|359409335|ref|ZP_09201803.1| thioredoxin-like protein [SAR116 cluster alpha proteobacterium
HIMB100]
gi|356676088|gb|EHI48441.1| thioredoxin-like protein [SAR116 cluster alpha proteobacterium
HIMB100]
Length = 183
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 114/172 (66%), Gaps = 3/172 (1%)
Query: 16 EDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTK 75
ED + + F GV P T +F T +AA SPL LF I+GV SVFF DF+ +TK
Sbjct: 6 EDTPNPATLKFIPGVAVLPNDTAEFTTAEAAKSSPLASRLFAIDGVVSVFFSGDFLAITK 65
Query: 76 QDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIR 135
D DW +LKP I A IM+ F+SGLPV+ SS+T EDDDETVQ IK LLDTR+R
Sbjct: 66 ADQ-ADWFVLKPSILAGIMEHFASGLPVIQAKAESSET--EEDDDETVQQIKHLLDTRVR 122
Query: 136 PTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
P V DGGDI F SF+ GVV L+M+G+C CPSS TLK G++NML+ YIPE
Sbjct: 123 PAVAMDGGDITFHSFEDGVVTLQMRGACQGCPSSTATLKMGIENMLRHYIPE 174
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK LLDTR+RP V DGGDI F SF+DGV+
Sbjct: 113 IKHLLDTRVRPAVAMDGGDITFHSFEDGVV 142
>gi|4836948|gb|AAD30650.1|AC006085_23 Similar to human CGI-33 protein [Arabidopsis thaliana]
Length = 304
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/184 (49%), Positives = 120/184 (65%), Gaps = 34/184 (18%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEG-----------------------------VKSVFFG 67
+ DFP ++A SPL K +F I+G V VF+G
Sbjct: 101 SADFPNSRSAMSSPLAKAIFAIDGIPRLLLQHTIVSSSYNPCFVTKIVSVDAGVVRVFYG 160
Query: 68 HDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSS--DTVIHEDDDETVQM 125
DF+TVTK DD V W +LKP+IFA +MDF+SSG P+ D+Q ++ DT IHEDD ETV M
Sbjct: 161 SDFVTVTKSDD-VTWDILKPDIFAVVMDFYSSGQPLFLDSQATAAKDTAIHEDDSETVAM 219
Query: 126 IKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQF 183
IKELL+TRIRP+VQ+DGGDI++ F + G+VKL+MQG+C+ CPSS VTLK+G++NML
Sbjct: 220 IKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLMH 279
Query: 184 YIPE 187
Y+ E
Sbjct: 280 YVSE 283
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 24/26 (92%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP+VQ+DGGDI++ F
Sbjct: 219 MIKELLETRIRPSVQDDGGDIEYCGF 244
>gi|403332235|gb|EJY65118.1| hypothetical protein OXYTRI_14732 [Oxytricha trifallax]
Length = 171
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 115/154 (74%), Gaps = 3/154 (1%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
QT+DF + + + SPL + LF+IEGV VF+G DFI+VTK+DD DW ++KPEI I D
Sbjct: 6 QTMDFSSIRFTHISPLARRLFQIEGVTRVFYGKDFISVTKKDDQ-DWNIVKPEILEVITD 64
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGG 153
+S P+ T+ PS DTVI++DD E V MIKE+++TRIRP VQEDGGD++++ F + G
Sbjct: 65 HYSKNQPLFTEDLPSDDTVINDDDSEAVAMIKEIIETRIRPFVQEDGGDVKYVDFDEEKG 124
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++++M+GSC CPSS VTL+NG++NML+ Y+ E
Sbjct: 125 HLRIQMKGSCAGCPSSSVTLRNGIENMLKHYVAE 158
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFR 57
MIKE+++TRIRP VQEDGGD++++ F EE G G A C P + R
Sbjct: 94 MIKEIIETRIRPFVQEDGGDVKYVDFD----EEKGHLRIQMKGSCAGC-PSSSVTLR 145
>gi|50419691|ref|XP_458373.1| DEHA2C15796p [Debaryomyces hansenii CBS767]
gi|49654039|emb|CAG86455.1| DEHA2C15796p [Debaryomyces hansenii CBS767]
Length = 246
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 118/158 (74%), Gaps = 3/158 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T +F +G+ A CSPL LF I+G+KS+ FG +FIT+ K ++D+ W LLKPEIF+ +
Sbjct: 54 NETREFLSGREAACSPLALKLFSIDGIKSIMFGSNFITIEKANEDLHWSLLKPEIFSILT 113
Query: 95 DFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ-- 151
+F ++G P+L +++ + D I EDDDETV MIKEL+ TRIRP +Q+DGGDI+F+SF
Sbjct: 114 EFLNNGTPILNEESELTDDMEISEDDDETVTMIKELIFTRIRPAIQDDGGDIEFVSFAED 173
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
G V L+++G+C SC SS VTLKNG+++ML++YI E T
Sbjct: 174 NGTVYLRLKGACRSCDSSSVTLKNGIESMLKYYIEEVT 211
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 25/28 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKEL+ TRIRP +Q+DGGDI+F+SF +
Sbjct: 145 MIKELIFTRIRPAIQDDGGDIEFVSFAE 172
>gi|226480566|emb|CAX73380.1| HIRA interacting protein 5 [Schistosoma japonicum]
gi|226480792|emb|CAX73493.1| HIRA interacting protein 5 [Schistosoma japonicum]
Length = 233
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/160 (62%), Positives = 124/160 (77%), Gaps = 7/160 (4%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ + DFP+ + A SPL + LFRIEGV+ VFFG DFIT+TK ++D +W ++KP
Sbjct: 42 PGQAVLGSGTRDFPSRKQAGSSPLARQLFRIEGVEQVFFGPDFITITK-NNDFEWAVIKP 100
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+++ATIMDF+SSG PV+ + + E DDETV MIKELLDTRIRPTVQEDGGDI +
Sbjct: 101 DVYATIMDFYSSGQPVIDEEKSQESDKPCEVDDETVLMIKELLDTRIRPTVQEDGGDIIY 160
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V LK+QGSC+SCPSSVVTLKNGVQNMLQFYIP+
Sbjct: 161 KGFKDGIVLLKLQGSCSSCPSSVVTLKNGVQNMLQFYIPD 200
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELLDTRIRPTVQEDGGDI + F+DG++
Sbjct: 138 MIKELLDTRIRPTVQEDGGDIIYKGFKDGIV 168
>gi|448091642|ref|XP_004197380.1| Piso0_004632 [Millerozyma farinosa CBS 7064]
gi|448096213|ref|XP_004198411.1| Piso0_004632 [Millerozyma farinosa CBS 7064]
gi|359378802|emb|CCE85061.1| Piso0_004632 [Millerozyma farinosa CBS 7064]
gi|359379833|emb|CCE84030.1| Piso0_004632 [Millerozyma farinosa CBS 7064]
Length = 246
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 119/156 (76%), Gaps = 3/156 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T +F +G+ A CSPL LF I+G+K++ FG +FITV K +D++DW +LKPEIF+ +
Sbjct: 54 NETREFLSGREAACSPLALKLFSIDGIKTIMFGSNFITVEKANDEIDWSVLKPEIFSILT 113
Query: 95 DFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--Q 151
++ ++G P++ +++ SSD I+E+DDE V MIKEL+ TRI+P +QEDGGDI+F+ F +
Sbjct: 114 EYLTNGSPIINEESELSSDVEINEEDDEIVAMIKELIFTRIKPAIQEDGGDIEFVKFIEE 173
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V LK++G+C SC SS VTLKNG+++ML+FYI E
Sbjct: 174 NGTVFLKLKGACRSCDSSTVTLKNGIESMLKFYIEE 209
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYC 48
MIKEL+ TRI+P +QEDGGDI+F+ F +EE G G C
Sbjct: 145 MIKELIFTRIKPAIQEDGGDIEFVKF----IEENGTVFLKLKGACRSC 188
>gi|391334432|ref|XP_003741608.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Metaseiulus occidentalis]
Length = 253
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/164 (54%), Positives = 113/164 (68%), Gaps = 7/164 (4%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
VLEE GQ DFP A S L + LF I GV VF G DFITVT+ DD ++W LK I
Sbjct: 58 VLEE-GQGKDFPNITTARNSLLVRQLFAIPGVDRVFLGPDFITVTRSDDALEWTALKASI 116
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTV------IHEDDDETVQMIKELLDTRIRPTVQEDGG 143
+AT+MDFFSSGLP+ ++P D+ E D +T MI EL+D+RIRPTV EDGG
Sbjct: 117 YATMMDFFSSGLPIFETSEPVGDSGGLSNVDFEEKDQQTTAMIAELIDSRIRPTVMEDGG 176
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI +F+ G+V+L++QGSCT+CPSS VTLK G++NML FY+PE
Sbjct: 177 DIVLRAFKDGIVELELQGSCTNCPSSSVTLKAGIENMLMFYVPE 220
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLLF-- 56
MI EL+D+RIRPTV EDGGDI +F+DG+ LE G + P+ + + +L
Sbjct: 158 MIAELIDSRIRPTVMEDGGDIVLRAFKDGIVELELQGSCTNCPSSSVTLKAGIENMLMFY 217
Query: 57 --RIEGVKSVFFGHD 69
+ GVK V D
Sbjct: 218 VPEVRGVKEVLSKED 232
>gi|260838224|ref|XP_002613749.1| hypothetical protein BRAFLDRAFT_84497 [Branchiostoma floridae]
gi|229299138|gb|EEN69758.1| hypothetical protein BRAFLDRAFT_84497 [Branchiostoma floridae]
Length = 263
Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/153 (65%), Positives = 117/153 (76%), Gaps = 19/153 (12%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFP AA+ SPL +L+ ++ DD DW++LKP+IFATIMDF
Sbjct: 90 TFDFPNHSAAHASPLARLVHPLD-----------------DDTYDWQILKPDIFATIMDF 132
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
F+SGLP+LTD P SDTVIH DDDETVQMIKELLDTRIRPTVQEDGGDI ++ F + G+
Sbjct: 133 FASGLPILTDEPPPSDTVIHPDDDETVQMIKELLDTRIRPTVQEDGGDIVYVGFDQESGI 192
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSSVVTL++GVQNMLQFYIPE
Sbjct: 193 VKLKMQGSCSSCPSSVVTLRSGVQNMLQFYIPE 225
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 24/26 (92%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELLDTRIRPTVQEDGGDI ++ F
Sbjct: 161 MIKELLDTRIRPTVQEDGGDIVYVGF 186
>gi|320170179|gb|EFW47078.1| TO42 [Capsaspora owczarzaki ATCC 30864]
Length = 280
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 117/172 (68%), Gaps = 3/172 (1%)
Query: 16 EDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTK 75
+D + + F GV T DF +AA SPL + L RI+GV VFF FI++ K
Sbjct: 70 QDTPNPNSLKFMPGVTVVDAGTYDFADSRAAATSPLARQLLRIQGVNRVFFAQKFISINK 129
Query: 76 QDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIR 135
D+ +W +LKPEI+ATIMDFF+SGLPV+ P + +++ETV MIKELLD+RIR
Sbjct: 130 ADE-AEWPVLKPEIYATIMDFFASGLPVVE--APKTTEEAATEENETVSMIKELLDSRIR 186
Query: 136 PTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
P VQEDGGDI+F SF+ GVVKLK+ GSC++CPSS TL +GV NML Y+PE
Sbjct: 187 PMVQEDGGDIEFKSFENGVVKLKLIGSCSTCPSSKATLYDGVSNMLMHYVPE 238
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLD+RIRP VQEDGGDI+F SF++GV++
Sbjct: 176 MIKELLDSRIRPMVQEDGGDIEFKSFENGVVK 207
>gi|384494366|gb|EIE84857.1| hypothetical protein RO3G_09567 [Rhizopus delemar RA 99-880]
Length = 171
Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 109/142 (76%), Gaps = 3/142 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL K LF+IEG+ VFFG DFIT++K D +W+L+KP+I++ IMD F+SG ++ D Q
Sbjct: 3 SPLAKQLFQIEGITGVFFGPDFITISK-DAMAEWQLMKPDIYSAIMDHFASGQSIVYDDQ 61
Query: 109 --PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+SDT I DD E VQMIKELLDTRIRP++QEDGGDI++ F+ G+VKLK++GSC C
Sbjct: 62 DLAASDTTILPDDPEEVQMIKELLDTRIRPSIQEDGGDIEYCGFENGIVKLKLKGSCRGC 121
Query: 167 PSSVVTLKNGVQNMLQFYIPET 188
S+ VTLKNG++NML YIPE
Sbjct: 122 DSATVTLKNGIENMLMHYIPEV 143
Score = 53.5 bits (127), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRP++QEDGGDI++ F++G+++
Sbjct: 80 MIKELLDTRIRPSIQEDGGDIEYCGFENGIVK 111
>gi|149913250|ref|ZP_01901784.1| NifU-like domain protein [Roseobacter sp. AzwK-3b]
gi|149813656|gb|EDM73482.1| NifU-like domain protein [Roseobacter sp. AzwK-3b]
Length = 187
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/164 (53%), Positives = 112/164 (68%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFPT +A+ SPL LF ++GV+ VFFG+DF+TVTK DD +W +KP
Sbjct: 18 PGQTVLEAGTADFPTAEASDKSPLATRLFGVKGVRGVFFGNDFVTVTKTDD-AEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLT-DAQPSSDTVIHE-DDDETVQMIKELLDTRIRPTVQEDGGDI 145
I IM+ F SG PV+ DA+ +S HE +D E V IKELLDTR+RP V +DGGDI
Sbjct: 77 SILGAIMEHFQSGQPVMAVDAEHASGHAAHEGEDSEIVGQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F+ GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFERGVVYLHMQGACAGCPSSTITLKMGIENLLRHYIPEVT 180
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F+ GV+
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFERGVV 146
>gi|297266190|ref|XP_001096379.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Macaca mulatta]
Length = 196
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/145 (57%), Positives = 109/145 (75%), Gaps = 20/145 (13%)
Query: 45 AAYCSP--LGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLP 102
AA+C+P + LL +IEGVKSVFFG DFITVTK+++D+DW LLKP+I+ATIMDFF+SGLP
Sbjct: 50 AAFCNPGKISPLLKQIEGVKSVFFGPDFITVTKENEDLDWNLLKPDIYATIMDFFASGLP 109
Query: 103 VLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGS 162
++T+ PS + + PTVQEDGGD+ + F+ G+V+LK+QGS
Sbjct: 110 LVTEETPSGEA------------------GNMLPTVQEDGGDVIYKGFEDGIVQLKLQGS 151
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPE 187
CTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 152 CTSCPSSIITLKNGIQNMLQFYIPE 176
>gi|260951229|ref|XP_002619911.1| hypothetical protein CLUG_01070 [Clavispora lusitaniae ATCC 42720]
gi|238847483|gb|EEQ36947.1| hypothetical protein CLUG_01070 [Clavispora lusitaniae ATCC 42720]
Length = 243
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 119/160 (74%), Gaps = 3/160 (1%)
Query: 31 LEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIF 90
L + +T +F +G+ A SPL LF ++GVKS+ G +FIT+ K DD++W +LKPEIF
Sbjct: 44 LLQENETREFLSGREAVISPLAMKLFSVDGVKSIMLGSNFITIEKSTDDIEWAVLKPEIF 103
Query: 91 ATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
+ + +F ++G P+++ DAQ ++D EDDDE V MIKEL+ TRIRP +Q+DGGDI+F+S
Sbjct: 104 SILTEFLTNGTPIISDDAQLTNDMQFSEDDDEIVSMIKELIFTRIRPAIQDDGGDIEFVS 163
Query: 150 FQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ GVV L+++G+C SC SS VTLKNG+++ML++YI E
Sbjct: 164 FEENTGVVYLRLKGACRSCDSSSVTLKNGIESMLKYYIEE 203
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKEL+ TRIRP +Q+DGGDI+F+SF++
Sbjct: 139 MIKELIFTRIRPAIQDDGGDIEFVSFEEN 167
>gi|150864668|ref|XP_001383601.2| hypothetical protein PICST_82838 [Scheffersomyces stipitis CBS
6054]
gi|149385924|gb|ABN65572.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 254
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 118/160 (73%), Gaps = 3/160 (1%)
Query: 31 LEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIF 90
L E +TI+F +G+ A SPL LF I+G+KS+ FG +FIT+ K +D+ W LLKPEIF
Sbjct: 54 LLEENETIEFLSGREAARSPLAVKLFSIDGIKSIMFGSNFITIEKNSNDLHWSLLKPEIF 113
Query: 91 ATIMDFFSSGLPVLTDAQP-SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
+ + ++ ++G P+L D + S D I++DDDE V +IKEL+ TRIRP +Q+DGGDI+F+S
Sbjct: 114 SILTEYLTNGTPILIDGESLSKDMEINDDDDEVVSIIKELIFTRIRPAIQDDGGDIEFVS 173
Query: 150 F--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F + G V L+++G+C SC SS VTLKNG+++ML++YI E
Sbjct: 174 FREEDGTVFLRLKGACRSCDSSSVTLKNGIESMLKYYIEE 213
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 26/28 (92%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
+IKEL+ TRIRP +Q+DGGDI+F+SF++
Sbjct: 149 IIKELIFTRIRPAIQDDGGDIEFVSFRE 176
>gi|254454487|ref|ZP_05067924.1| NifU domain protein [Octadecabacter arcticus 238]
gi|198268893|gb|EDY93163.1| NifU domain protein [Octadecabacter arcticus 238]
Length = 183
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 109/164 (66%), Gaps = 1/164 (0%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV T+ FPT + A SPL LF + GV VFFG DFITVTK DD +DW
Sbjct: 14 LKFLPGVAVMEQGTVSFPTREDAARSPLASQLFDVNGVDGVFFGGDFITVTKTDD-MDWT 72
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGG 143
LKP I IM+ F+SG P+L + SD + +DDDE V IKELLDTR+RP V +DGG
Sbjct: 73 PLKPAILGAIMEHFTSGQPLLNEDASMSDHAVSDDDDELVTQIKELLDTRVRPAVAQDGG 132
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI F F+ GVV L++QG+C+ CPSS TLK G++NML+ YIP+
Sbjct: 133 DILFHGFERGVVYLQLQGACSGCPSSTATLKGGIENMLRHYIPD 176
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F+ GV+
Sbjct: 115 IKELLDTRVRPAVAQDGGDILFHGFERGVV 144
>gi|344228223|gb|EGV60109.1| HIRA-interacting protein 5 [Candida tenuis ATCC 10573]
Length = 214
Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/156 (51%), Positives = 115/156 (73%), Gaps = 3/156 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T +F +G+ A SPL LF ++GVKS+ FG DFIT+ K ++D+ W LLKPEIF+ +
Sbjct: 21 NETKEFLSGREASVSPLAVKLFSVDGVKSIMFGSDFITIEKHNNDLHWALLKPEIFSILT 80
Query: 95 DFFSSGLPVLTDAQP-SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--Q 151
++ ++G P+L + S D I+E+DDE V MIKEL+ TRIRP +Q+DGGDI+F+SF +
Sbjct: 81 EYLTNGTPILNEGTTLSPDMEINEEDDEVVSMIKELIFTRIRPAIQDDGGDIEFVSFDEE 140
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V LK++G+C SC SS VTLKNG+++MLQ+YI E
Sbjct: 141 DGKVMLKLKGACRSCDSSSVTLKNGIESMLQYYIEE 176
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYC 48
MIKEL+ TRIRP +Q+DGGDI+F+SF EE G+ + G C
Sbjct: 112 MIKELIFTRIRPAIQDDGGDIEFVSFD----EEDGKVMLKLKGACRSC 155
>gi|83949998|ref|ZP_00958731.1| nifU domain protein [Roseovarius nubinhibens ISM]
gi|83837897|gb|EAP77193.1| nifU domain protein [Roseovarius nubinhibens ISM]
Length = 188
Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 109/165 (66%), Gaps = 10/165 (6%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ +AA SPL + +F+I GV VFFGHDF+TVTK D+ +W +KP
Sbjct: 18 PGQTVLDAGTADFPSAEAAGKSPLAERIFKIAGVTGVFFGHDFVTVTK-DEGTEWDHVKP 76
Query: 88 EIFATIMDFFSSGLPVLTDA--QPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGD 144
I IM+ F SG PV+ DA P S H +D E V IKELLDTR+RP V +DGGD
Sbjct: 77 AILGAIMEHFQSGKPVMLDAGGDPQSGHAEHTGEDGEIVNQIKELLDTRVRPAVAQDGGD 136
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
I F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 ITFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRHYIPEVT 181
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F GV+
Sbjct: 118 IKELLDTRVRPAVAQDGGDITFHGFDRGVV 147
>gi|260431494|ref|ZP_05785465.1| NifU domain protein [Silicibacter lacuscaerulensis ITI-1157]
gi|260415322|gb|EEX08581.1| NifU domain protein [Silicibacter lacuscaerulensis ITI-1157]
Length = 187
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 110/164 (67%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFPT +AA SPL K +F ++GV VFFG+DF+TVTK DDDV W +KP
Sbjct: 18 PGQTVLEAGTADFPTAEAAENSPLAKRIFAVKGVTGVFFGNDFVTVTK-DDDVQWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTD-AQPSSDTVIHE-DDDETVQMIKELLDTRIRPTVQEDGGDI 145
I +M+ + SG P++ D A +S H +D E V IKELLD+R+RP V +DGGDI
Sbjct: 77 AILGAVMEHYQSGQPIMGDGADAASGHAEHTGEDSEIVNQIKELLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F GV+
Sbjct: 117 IKELLDSRVRPAVAQDGGDITFHGFDRGVV 146
>gi|344250818|gb|EGW06922.1| NFU1 iron-sulfur cluster scaffold-like, mitochondrial [Cricetulus
griseus]
Length = 328
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/153 (58%), Positives = 109/153 (71%), Gaps = 25/153 (16%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK
Sbjct: 81 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKPH------------------ 122
Query: 96 FFSSGLPVLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
F S P ++D+ +P S E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+
Sbjct: 123 -FCSHAPCVSDSSRPGS-----EEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGI 176
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 177 VRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 209
Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL-FR 57
MIKELLDTRIRPTVQEDGGD+ + F+DG+ L+ G P+ S + +L F
Sbjct: 147 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFY 206
Query: 58 I---EGVKSVFFGHDFITVTKQDDDVDWKLLK 86
I EGV+ G+DF + T D + KL+K
Sbjct: 207 IPEVEGVEQESKGYDFESET--DTETIAKLVK 236
>gi|17946069|gb|AAL49077.1| RE53788p [Drosophila melanogaster]
Length = 134
Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/94 (85%), Positives = 88/94 (93%)
Query: 94 MDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
MDFF+SGLPVL DAQP++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++GG
Sbjct: 1 MDFFASGLPVLNDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEGG 60
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VVKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 61 VVKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 94
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 32 MIKELLDTRIRPTVQEDGGDIVFMGYEGGVVK 63
>gi|345314287|ref|XP_001517848.2| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like, partial [Ornithorhynchus anatinus]
Length = 134
Score = 169 bits (427), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 83/133 (62%), Positives = 101/133 (75%), Gaps = 20/133 (15%)
Query: 55 LFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTV 114
LFRIEGVKSVF G DFITVTK+++DVDW LLKP+I+ATIMDFF+SGLPV+T+ PS++
Sbjct: 2 LFRIEGVKSVFLGPDFITVTKENEDVDWNLLKPDIYATIMDFFASGLPVVTEEAPSAEAG 61
Query: 115 IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLK 174
PTVQEDGGD+ + F+ GVV+LK+QGSCTSCPSS+VTLK
Sbjct: 62 --------------------TPTVQEDGGDVIYRGFEDGVVQLKLQGSCTSCPSSIVTLK 101
Query: 175 NGVQNMLQFYIPE 187
+G+QNMLQFYIPE
Sbjct: 102 SGIQNMLQFYIPE 114
>gi|126730479|ref|ZP_01746290.1| nifU domain protein [Sagittula stellata E-37]
gi|126709212|gb|EBA08267.1| nifU domain protein [Sagittula stellata E-37]
Length = 187
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 107/164 (65%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ AA SPL + LF ++GV +FFG+DF+TVTK D VDW +KP
Sbjct: 18 PGQTVLDMGTADFPSADAAGASPLAQRLFAVDGVTGIFFGNDFVTVTKADT-VDWDHMKP 76
Query: 88 EIFATIMDFFSSGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
I IM+ F SG PV++D AQ +D E V IKELLD+R+RP V +DGGDI
Sbjct: 77 AILGAIMEHFQSGQPVMSDGAAQAGGHAEHEGEDGEIVGQIKELLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F GV+
Sbjct: 117 IKELLDSRVRPAVAQDGGDITFHGFDRGVV 146
>gi|163744246|ref|ZP_02151606.1| NifU-like domain protein [Oceanibulbus indolifex HEL-45]
gi|161381064|gb|EDQ05473.1| NifU-like domain protein [Oceanibulbus indolifex HEL-45]
Length = 186
Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 110/164 (67%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFPT A SPL + LF +EGV VFFG DF+TVTKQD V+W +KP
Sbjct: 18 PGQTVLEMGTADFPTPDAGATSPLAQRLFAVEGVTGVFFGTDFVTVTKQDA-VEWDHVKP 76
Query: 88 EIFATIMDFFSSGLPVL-TDAQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDI 145
+ IM+ F SG V+ +D QP+S H+ +D E V IKELLD+R+RP V +DGGDI
Sbjct: 77 ALLGAIMEHFQSGDAVMASDHQPTSGHAAHDGEDGEIVGQIKELLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F+ GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F+ GV+
Sbjct: 117 IKELLDSRVRPAVAQDGGDITFHGFERGVV 146
>gi|71021777|ref|XP_761119.1| hypothetical protein UM04972.1 [Ustilago maydis 521]
gi|46100569|gb|EAK85802.1| hypothetical protein UM04972.1 [Ustilago maydis 521]
Length = 293
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/157 (53%), Positives = 112/157 (71%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F +++ SPL K LF I GV SVF+G DF+TV+K D + W +LKPEI+++IM+F
Sbjct: 98 THEFLDTRSSMASPLAKKLFNIPGVVSVFYGPDFVTVSK-DAEHQWSILKPEIYSSIMEF 156
Query: 97 FSSGLPVLTD---AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--- 150
F+SG P+ TD A S DTVI + D E V MIKELLDTR+RP +QEDGGD+++ F
Sbjct: 157 FTSGHPLFTDPESAAGSQDTVILDTDSEVVAMIKELLDTRVRPAIQEDGGDLEYRGFGED 216
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VK+K++GSC C SS VTLK+G++ ML YIPE
Sbjct: 217 TDGIVKVKLKGSCRGCDSSTVTLKSGIERMLMHYIPE 253
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%), Gaps = 3/35 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF---QDGVLE 32
MIKELLDTR+RP +QEDGGD+++ F DG+++
Sbjct: 188 MIKELLDTRVRPAIQEDGGDLEYRGFGEDTDGIVK 222
>gi|384248726|gb|EIE22209.1| HIRA-interacting protein 5 [Coccomyxa subellipsoidea C-169]
Length = 213
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/152 (57%), Positives = 106/152 (69%), Gaps = 3/152 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ F + + SPL K LF I+GV VFFG DF+TVTK DD W +L+P+IFA +M+
Sbjct: 35 SAHFESPRDGMSSPLAKRLFAIDGVTGVFFGSDFVTVTKSDD-YAWSVLRPQIFAAMMEH 93
Query: 97 FSSGLPVLTDAQP-SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FSSG + TD + DT I EDD E V MIKELL+TRIRP VQEDGGDI F G VV
Sbjct: 94 FSSGDELFTDQSAVAPDTAISEDDSEVVAMIKELLETRIRPAVQEDGGDIGFDEETGQVV 153
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LKMQG+C+ CPSS +TLK+G++NML YIPE
Sbjct: 154 -LKMQGACSGCPSSSLTLKSGIENMLMHYIPE 184
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 29/48 (60%), Gaps = 7/48 (14%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYC 48
MIKELL+TRIRP VQEDGGDI G EE GQ + G + C
Sbjct: 123 MIKELLETRIRPAVQEDGGDI-------GFDEETGQVVLKMQGACSGC 163
>gi|328862177|gb|EGG11278.1| hypothetical protein MELLADRAFT_41822 [Melampsora larici-populina
98AG31]
Length = 292
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 115/164 (70%), Gaps = 7/164 (4%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
V+ + T++F + SPL K LF+I G+KS+FFG DFI++ K D++ +W ++KPEI
Sbjct: 95 VMGKSNGTLEFLSNSNPNSSPLAKSLFKIPGIKSLFFGPDFISINK-DEETNWSIIKPEI 153
Query: 90 FATIMDFFSSGLPVLTDA----QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
++ +M+FFSSG P+LTD Q DT + E D E + MIKELLDTR+RP++QEDGGD+
Sbjct: 154 YSLMMEFFSSGQPILTDESEGNQGPEDTRVLESDSEVIAMIKELLDTRVRPSIQEDGGDL 213
Query: 146 QFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++ F + GVV L ++GSC C SS VTLK+G++ ML YIPE
Sbjct: 214 EYKGFDEETGVVTLMLKGSCRGCDSSTVTLKSGIERMLMHYIPE 257
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 25/28 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELLDTR+RP++QEDGGD+++ F +
Sbjct: 193 MIKELLDTRVRPSIQEDGGDLEYKGFDE 220
>gi|110678955|ref|YP_681962.1| NifU-like domain-containing protein [Roseobacter denitrificans OCh
114]
gi|109455071|gb|ABG31276.1| NifU-like domain protein [Roseobacter denitrificans OCh 114]
Length = 187
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 108/164 (65%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ + A SPL + +F +EGV VFFG DF+TVTK D+ VDW +KP
Sbjct: 18 PGQTVLEMGTADFPSAETADKSPLAERVFAVEGVTGVFFGTDFVTVTKADN-VDWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDET-VQMIKELLDTRIRPTVQEDGGDI 145
+ IM+ F SG PV+ D P+S H DD V IKELLDTR+RP V +DGGDI
Sbjct: 77 ALLGAIMEHFQSGQPVMAGDHTPTSGHAEHTGDDGVIVNQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F+ GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F+ GV+
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFERGVV 146
>gi|148666783|gb|EDK99199.1| mCG130855, isoform CRA_c [Mus musculus]
Length = 219
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 103/126 (81%), Gaps = 2/126 (1%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 94 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 153
Query: 96 FFSSGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
FF+SGLP++T+ P + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G
Sbjct: 154 FFASGLPLVTEETPPPPGEAGSSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDG 213
Query: 154 VVKLKM 159
+V+LK+
Sbjct: 214 IVRLKL 219
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 185 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIVR 216
>gi|443894112|dbj|GAC71462.1| nifu-like domain-containing proteins [Pseudozyma antarctica T-34]
Length = 291
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 112/157 (71%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F +A+ SPL K LF I G+ VF+G DF+TV+K D + W LKPEI+++IM+F
Sbjct: 96 THEFLDTRASMASPLAKKLFNIPGIVGVFYGPDFVTVSK-DAEHQWSTLKPEIYSSIMEF 154
Query: 97 FSSGLPVLTD---AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--- 150
F++G P+ TD + SSDTVI E D E V MIKELLDTR+RP +QEDGGD+++ F
Sbjct: 155 FTAGHPLFTDPESSHGSSDTVILETDSEVVAMIKELLDTRVRPAIQEDGGDLEYRGFGED 214
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VK+K++GSC C SS VTLK+G++ ML+ YIPE
Sbjct: 215 TDGIVKVKLKGSCRGCDSSTVTLKSGIERMLKHYIPE 251
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%), Gaps = 3/35 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF---QDGVLE 32
MIKELLDTR+RP +QEDGGD+++ F DG+++
Sbjct: 186 MIKELLDTRVRPAIQEDGGDLEYRGFGEDTDGIVK 220
>gi|426335854|ref|XP_004029421.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Gorilla gorilla gorilla]
Length = 213
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/152 (56%), Positives = 104/152 (68%), Gaps = 26/152 (17%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK + ++ +
Sbjct: 68 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKSN-----------LYLLTLK 116
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
G E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 117 MHKLG---------------SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 161
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 162 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 193
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 131 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 162
>gi|301107396|ref|XP_002902780.1| iron-sulfur cluster scaffold protein Nfu-like protein [Phytophthora
infestans T30-4]
gi|262097898|gb|EEY55950.1| iron-sulfur cluster scaffold protein Nfu-like protein [Phytophthora
infestans T30-4]
Length = 217
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/153 (56%), Positives = 110/153 (71%), Gaps = 4/153 (2%)
Query: 38 IDF-PTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+DF P+ + SPL K LF+IEGV VFFG DFI+VTK +++ DW L EIFATIMDF
Sbjct: 31 VDFTPSSEEVRRSPLAKKLFQIEGVTRVFFGKDFISVTKTEEE-DWDALNAEIFATIMDF 89
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
F+S V++D +DT I DDDE V MIKELL+ RIRP+VQ+DGGDI + F + G
Sbjct: 90 FASDEQVMSDEPIVTDTTILPDDDEVVAMIKELLEQRIRPSVQDDGGDIFYKGFDEKTGT 149
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V +++ GSC CPSS VTLK+GV+NML+ YIPE
Sbjct: 150 VSVQLAGSCAGCPSSSVTLKHGVENMLKHYIPE 182
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYC 48
MIKELL+ RIRP+VQ+DGGDI F G E+ G G A C
Sbjct: 118 MIKELLEQRIRPSVQDDGGDI----FYKGFDEKTGTVSVQLAGSCAGC 161
>gi|84683414|ref|ZP_01011317.1| nifU domain protein [Maritimibacter alkaliphilus HTCC2654]
gi|84668157|gb|EAQ14624.1| nifU domain protein [Maritimibacter alkaliphilus HTCC2654]
Length = 186
Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 113/170 (66%), Gaps = 5/170 (2%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F+ Q+ VLE T DFP+ +AA SPL + +F + GVK VFFG DF+TVTK DD V
Sbjct: 14 LKFLPGQE-VLE--AGTADFPSAEAAAKSPLAQRVFAVNGVKGVFFGTDFVTVTKADD-V 69
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHED-DDETVQMIKELLDTRIRPTVQ 139
+W +KP I IM+ F SG PV+ + + H+ D E V IK+LLDTR+RP V
Sbjct: 70 EWDHVKPAILGAIMEHFQSGAPVMGEGPREAAHAEHDGPDAEIVVQIKDLLDTRVRPAVA 129
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+DGGDI F F+ GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 130 QDGGDITFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLKHYIPEVT 179
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+LLDTR+RP V +DGGDI F F+ GV+
Sbjct: 116 IKDLLDTRVRPAVAQDGGDITFHGFERGVV 145
>gi|348671168|gb|EGZ10989.1| hypothetical protein PHYSODRAFT_317963 [Phytophthora sojae]
Length = 217
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/153 (56%), Positives = 111/153 (72%), Gaps = 4/153 (2%)
Query: 38 IDF-PTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+DF P + SPL K +F+IEGV VFFG DFI+VTK +D+ DW L EIFATIMDF
Sbjct: 31 VDFTPNSEEVRRSPLAKKMFQIEGVTRVFFGKDFISVTKTEDE-DWDALNAEIFATIMDF 89
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
F+S V++D +DT I +DDE V MIKELL+ RIRP+VQ+DGGDI + F + G+
Sbjct: 90 FASDEEVMSDEPIVTDTTILPEDDEVVAMIKELLEQRIRPSVQDDGGDIFYKGFDEKTGL 149
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V++++ GSC CPSS VTLK+GV+NML+ YIPE
Sbjct: 150 VQVQLAGSCAGCPSSSVTLKHGVENMLKHYIPE 182
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+ RIRP+VQ+DGGDI + F +
Sbjct: 118 MIKELLEQRIRPSVQDDGGDIFYKGFDE 145
>gi|392380839|ref|YP_005030035.1| putative iron-sulfur cluster scaffold,NifU-like [Azospirillum
brasilense Sp245]
gi|356875803|emb|CCC96551.1| putative iron-sulfur cluster scaffold,NifU-like [Azospirillum
brasilense Sp245]
Length = 184
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/151 (52%), Positives = 100/151 (66%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFP+ A SPL + LF I+GV+ VF G DF+T+TK D +W LLKP I IM+
Sbjct: 27 TADFPSRDGAAASPLAQRLFEIDGVQGVFLGADFVTITKAGDK-EWFLLKPSILGVIMEH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F++ PVL + DDDE V IKELLDTR+RP V +DGGDI F F+ GVV
Sbjct: 86 FTANRPVLLEEAAGDGHAASADDDEIVTQIKELLDTRVRPAVAQDGGDITFYGFEEGVVY 145
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L+M+G+C+ CPSS TLK G++NML+ YIPE
Sbjct: 146 LEMKGACSGCPSSTATLKAGIENMLRHYIPE 176
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELLDTR+RP V +DGGDI F F++GV LE G P+ A + + +L
Sbjct: 115 IKELLDTRVRPAVAQDGGDITFYGFEEGVVYLEMKGACSGCPSSTATLKAGIENML 170
>gi|254465238|ref|ZP_05078649.1| NifU domain protein [Rhodobacterales bacterium Y4I]
gi|206686146|gb|EDZ46628.1| NifU domain protein [Rhodobacterales bacterium Y4I]
Length = 188
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 108/165 (65%), Gaps = 10/165 (6%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ AA SPL +F ++GV VFFG+DF+TVTK + +DW +KP
Sbjct: 18 PGQTVLEAGTADFPSADAAGKSPLASRIFAVDGVTGVFFGNDFVTVTKAEG-IDWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTD--AQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGD 144
I +M+ + SG PV+ D A P+S H +D E V IKELLD+R+RP V +DGGD
Sbjct: 77 AILGAVMEHYQSGQPVMADGSADPASGHAEHSGEDAEIVNQIKELLDSRVRPAVAQDGGD 136
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
I F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 ITFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 181
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F GV+
Sbjct: 118 IKELLDSRVRPAVAQDGGDITFHGFDRGVV 147
>gi|310815348|ref|YP_003963312.1| NifU domain-containing protein [Ketogulonicigenium vulgare Y25]
gi|385232885|ref|YP_005794227.1| NifU-like domain-containing protein [Ketogulonicigenium vulgare
WSH-001]
gi|308754083|gb|ADO42012.1| NifU domain protein [Ketogulonicigenium vulgare Y25]
gi|343461796|gb|AEM40231.1| NifU-like protein domain protein [Ketogulonicigenium vulgare
WSH-001]
Length = 185
Score = 166 bits (420), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/160 (51%), Positives = 104/160 (65%), Gaps = 7/160 (4%)
Query: 34 PGQ------TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ T DFP+ +AA SPL K LF ++GV VF G+DFITVTK D+ ++W LKP
Sbjct: 18 PGQQVLELGTADFPSAEAATTSPLAKRLFAVDGVTGVFLGYDFITVTKTDN-LEWPHLKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ IM+ F SG PV+ S+ +D V+ IKELLDTR+RP V +DGGDI F
Sbjct: 77 AVLGAIMEHFQSGQPVMEGEAVSAHRAHDGEDGAIVEQIKELLDTRVRPAVAQDGGDITF 136
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F GVV L MQGSC CPSS +TLK G++N+L+ YIPE
Sbjct: 137 HGFDRGVVYLHMQGSCAGCPSSTLTLKMGIENLLRHYIPE 176
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F GV+
Sbjct: 115 IKELLDTRVRPAVAQDGGDITFHGFDRGVV 144
>gi|303274691|ref|XP_003056661.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461013|gb|EEH58306.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 190
Score = 166 bits (419), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 81/154 (52%), Positives = 112/154 (72%), Gaps = 5/154 (3%)
Query: 38 IDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFF 97
++F T + A SPL K LF I+GV SVFFG D++TVTK + +W +LKPE+FA +MD +
Sbjct: 15 LNFATPREAMASPLAKKLFAIDGVVSVFFGADYVTVTKNETH-EWGVLKPEVFAAVMDHY 73
Query: 98 SSGLPVLTDAQP--SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGG 153
+SG P+++D ++ T I +DDDE V MIKELL+TRIRP V EDGGDI + + G
Sbjct: 74 ASGDPLVSDDAELVAAGTAIADDDDEIVAMIKELLETRIRPAVAEDGGDIVYKGWDESTG 133
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VV ++M+G+C CPSS VTLK+G++NML+ Y+PE
Sbjct: 134 VVTVQMRGACDGCPSSSVTLKSGIENMLRHYVPE 167
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP V EDGGDI + + +
Sbjct: 103 MIKELLETRIRPAVAEDGGDIVYKGWDE 130
>gi|145344446|ref|XP_001416743.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576969|gb|ABO95036.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 206
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 114/164 (69%), Gaps = 10/164 (6%)
Query: 33 EPGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
+PG+ + +F + A SPL K LF IEGV +VFFG DF+TVTK +D +W+ +K
Sbjct: 17 QPGREVYAEGSKNFSNAREAMASPLAKRLFAIEGVTNVFFGIDFVTVTK-GEDAEWETVK 75
Query: 87 PEIFATIMDFFSSGLPVLTDAQ-PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
P+ F I +F++SG V+ + + +S T I EDDDE V MIKELL+TRIRP V EDGGDI
Sbjct: 76 PQTFEAITNFYASGETVMDEEKLAASGTAIAEDDDEIVAMIKELLETRIRPAVAEDGGDI 135
Query: 146 QFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F +F + G+V +++QGSC CPSS VTLK+G++NML Y+PE
Sbjct: 136 VFKAFDPESGLVTVQLQGSCDGCPSSSVTLKSGIENMLMHYVPE 179
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/26 (76%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP V EDGGDI F +F
Sbjct: 115 MIKELLETRIRPAVAEDGGDIVFKAF 140
>gi|99078069|ref|YP_611327.1| nitrogen-fixing NifU-like [Ruegeria sp. TM1040]
gi|99035207|gb|ABF62065.1| nitrogen-fixing NifU-like protein [Ruegeria sp. TM1040]
Length = 187
Score = 165 bits (418), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 109/164 (66%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ +AA SPL + +F + GV VFFG+DF+TVTK DD V+W +KP
Sbjct: 18 PGQTVLDAGTADFPSAEAASKSPLAQRIFAVSGVTGVFFGNDFVTVTK-DDSVEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQP-SSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDI 145
+ +M+ + SG PV+ + Q +S H +D E V IKELLD+R+RP V +DGGDI
Sbjct: 77 AVLGAVMEHYQSGQPVINEGQQQASGHAEHTGEDGEIVNQIKELLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F GV+
Sbjct: 117 IKELLDSRVRPAVAQDGGDITFHGFDRGVV 146
>gi|339504557|ref|YP_004691977.1| NifU-like protein [Roseobacter litoralis Och 149]
gi|338758550|gb|AEI95014.1| NifU-like protein [Roseobacter litoralis Och 149]
Length = 187
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 107/164 (65%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ + A SPL + +F IEGV VFFG DF+TVTK D VDW +KP
Sbjct: 18 PGQTVLEMGTADFPSAETADKSPLAERIFAIEGVTGVFFGTDFVTVTKADS-VDWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDET-VQMIKELLDTRIRPTVQEDGGDI 145
+ IM+ F SG PV+ D P+S H +D V IKELLDTR+RP V +DGGDI
Sbjct: 77 GLLGAIMEHFQSGQPVMAGDHTPTSGHAEHTGEDGVIVNQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F+ GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F+ GV+
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFERGVV 146
>gi|66808847|ref|XP_638146.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium discoideum AX4]
gi|60466582|gb|EAL64634.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium discoideum AX4]
Length = 314
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 117/163 (71%), Gaps = 5/163 (3%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
VLEE GQ IDF + + SPL LF+++GV VFF DFI+V K + +W +LKP+I
Sbjct: 119 VLEE-GQIIDFSDFKTSQQSPLANNLFKLDGVNRVFFSSDFISVNKYPEH-EWSILKPQI 176
Query: 90 FATIMDFFSSGLPVLTD---AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
+ TI+DF+ SGLP+L+D ++DT+I +DDE V MIKEL++TRIRPTV EDGG+I+
Sbjct: 177 YGTIIDFYHSGLPILSDPSLGNINADTMILPEDDEVVAMIKELIETRIRPTVLEDGGNIK 236
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
++ F+ G+V +++QG+C+SC SS TLK G++ ML +I E T
Sbjct: 237 YMGFKDGIVMVQLQGTCSSCSSSQATLKGGIERMLMHWISEVT 279
Score = 50.4 bits (119), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 29/31 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKEL++TRIRPTV EDGG+I+++ F+DG++
Sbjct: 215 MIKELIETRIRPTVLEDGGNIKYMGFKDGIV 245
>gi|76155328|gb|AAX26597.2| SJCHGC03039 protein [Schistosoma japonicum]
Length = 222
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 95/154 (61%), Positives = 118/154 (76%), Gaps = 7/154 (4%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ + DFP+ + A SPL + LFRIEGV+ VFFG DFIT+TK ++D +W ++KP
Sbjct: 70 PGQAVLGSGTRDFPSRKQAGSSPLARQLFRIEGVEQVFFGPDFITITK-NNDFEWAVIKP 128
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+++ATIMDF+SSG PV+ + + E DDETV MIKELLDTRIRPTVQEDGGDI +
Sbjct: 129 DVYATIMDFYSSGQPVIDEEKSQESDKPCEVDDETVLMIKELLDTRIRPTVQEDGGDIIY 188
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
F+ G+V LK+QGSC+SCPSSVVTLKNGVQNML
Sbjct: 189 KGFKDGIVLLKLQGSCSSCPSSVVTLKNGVQNML 222
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELLDTRIRPTVQEDGGDI + F+DG++
Sbjct: 166 MIKELLDTRIRPTVQEDGGDIIYKGFKDGIV 196
>gi|255264504|ref|ZP_05343846.1| NifU domain protein [Thalassiobium sp. R2A62]
gi|255106839|gb|EET49513.1| NifU domain protein [Thalassiobium sp. R2A62]
Length = 187
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/162 (50%), Positives = 106/162 (65%), Gaps = 9/162 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ +AA SPL K +F +EGV VFFG DF+TVTK DD++W +KP
Sbjct: 18 PGQTVLDMGTADFPSAEAAEKSPLAKRIFAVEGVTGVFFGTDFVTVTK-GDDIEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHE--DDDETVQMIKELLDTRIRPTVQEDGGDI 145
I +M+ + SG V+ P+S +D E V IKELLDTR+RP V +DGGDI
Sbjct: 77 AILGAVMEHYQSGAAVIDGEAPTSGGHAEHTGEDAEIVGQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ F GVV L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 TFLGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 178
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F+ F GV+
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFLGFDRGVV 146
>gi|354548448|emb|CCE45184.1| hypothetical protein CPAR2_701960 [Candida parapsilosis]
Length = 254
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/159 (49%), Positives = 116/159 (72%), Gaps = 7/159 (4%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T +F +G+ A+ SPL LF ++G+KS+ FG +FIT+ K ++W+LLKPEIF+ +
Sbjct: 69 NETREFLSGREAHSSPLAVKLFSVDGIKSIMFGSNFITIEKSPH-IEWQLLKPEIFSILT 127
Query: 95 DFFSSGLPVLT----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
++ ++GLPV+ DA+ +SD +EDDDE V MIKEL+ TRIRP +Q+DGGDI+FI F
Sbjct: 128 EYLTNGLPVINLDGEDAELASDVAFNEDDDEVVSMIKELIFTRIRPAIQDDGGDIEFIDF 187
Query: 151 Q--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V LK++G+C +C SS VTLKNG+++ML+ YI E
Sbjct: 188 RESDGTVFLKLKGACRTCDSSSVTLKNGIESMLKHYIEE 226
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKEL+ TRIRP +Q+DGGDI+FI F++
Sbjct: 162 MIKELIFTRIRPAIQDDGGDIEFIDFRES 190
>gi|325187609|emb|CCA22145.1| ironsulfur cluster scaffold protein Nfulike protein putative
[Albugo laibachii Nc14]
Length = 287
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 111/153 (72%), Gaps = 4/153 (2%)
Query: 38 IDFPTGQAAYC-SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+DF G A SPL K LF+I+G+ VFFG DFI+VTK DD + W L+ EIFATI+DF
Sbjct: 101 VDFVPGAAEIRQSPLAKKLFQIDGISRVFFGKDFISVTKADD-MHWDALRAEIFATIIDF 159
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
+ +G ++D +DT I +DDE V MIKELL+ RIRP+VQ+DGGDI + F + G+
Sbjct: 160 YGTGEATMSDEPIVTDTTILPEDDEVVAMIKELLEQRIRPSVQDDGGDIFYKDFDVERGI 219
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKL++ G+C CPSS VTLK+GV+NML++YIPE
Sbjct: 220 VKLQLAGACAGCPSSSVTLKSGVENMLKYYIPE 252
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+ RIRP+VQ+DGGDI + F
Sbjct: 188 MIKELLEQRIRPSVQDDGGDIFYKDF 213
>gi|296421235|ref|XP_002840171.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636384|emb|CAZ84362.1| unnamed protein product [Tuber melanosporum]
Length = 279
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/159 (50%), Positives = 113/159 (71%), Gaps = 2/159 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
VL E Q+ ++ G+ + SPL + LF ++GV+SVF+G DFIT+TK D++ W LK E+
Sbjct: 69 VLPEGCQSQEYIDGRETHNSPLARKLFAVDGVRSVFYGPDFITITK-DEETQWAFLKAEV 127
Query: 90 FATIMDFFSSGLPVLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
++ I + +SG PV+ + SSDT E D E V MIKELL+TRIRP +QEDGGDI++
Sbjct: 128 YSLITEALNSGEPVILEGTMESSDTQREEGDSEVVGMIKELLETRIRPAIQEDGGDIEYR 187
Query: 149 SFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ GVVKLK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 188 GFENGVVKLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 226
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRP +QEDGGDI++ F++GV++
Sbjct: 164 MIKELLETRIRPAIQEDGGDIEYRGFENGVVK 195
>gi|126740480|ref|ZP_01756167.1| nifU domain protein [Roseobacter sp. SK209-2-6]
gi|126718281|gb|EBA14996.1| nifU domain protein [Roseobacter sp. SK209-2-6]
Length = 187
Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 105/164 (64%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP +AA SPL + +F GV VFFG+DF+TVTK +DV+W +KP
Sbjct: 18 PGQTVLETGTADFPNAEAAENSPLAQRVFAAAGVTGVFFGNDFVTVTK-SEDVEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLT--DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
I IM+ F SG PVL AQ S +D E V IK+LLD+R+RP V +DGGDI
Sbjct: 77 AILGAIMEHFQSGQPVLNAGGAQSSGHAEHSGEDAEVVNQIKDLLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 42.7 bits (99), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+LLD+R+RP V +DGGDI F F GV+
Sbjct: 117 IKDLLDSRVRPAVAQDGGDITFHGFDRGVV 146
>gi|254474955|ref|ZP_05088341.1| NifU domain protein [Ruegeria sp. R11]
gi|214029198|gb|EEB70033.1| NifU domain protein [Ruegeria sp. R11]
Length = 187
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 107/164 (65%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ +AA SPL + +F + GV VFFG+DF+TVTK D V+W +KP
Sbjct: 18 PGQTVLEMGTADFPSAEAAGSSPLAQRIFAVSGVTGVFFGNDFVTVTKADG-VEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDA--QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
I +M+ F SG PV+++ Q S +D E V IKELLD+R+RP V +DGGDI
Sbjct: 77 AILGAVMEHFQSGQPVISEGGEQTSGHAEHTGEDGEIVNQIKELLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F GV+
Sbjct: 117 IKELLDSRVRPAVAQDGGDITFHGFDRGVV 146
>gi|344303611|gb|EGW33860.1| hypothetical protein SPAPADRAFT_59230 [Spathaspora passalidarum
NRRL Y-27907]
Length = 251
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 113/156 (72%), Gaps = 4/156 (2%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T +F +G+ A CSPL LF I+GVKS+ +G DFITV K +DW L+KPEIF+ +
Sbjct: 56 NETREFLSGREAACSPLAVKLFSIDGVKSIMYGSDFITVQKSKG-IDWTLIKPEIFSILT 114
Query: 95 DFFSSGLPVLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--Q 151
++ ++G P+L + Q ++D +I EDDDE V MIKEL+ TRIRP + +DGGDI+F+ F
Sbjct: 115 EYLTNGTPILLEEEQITNDMMISEDDDEVVGMIKELIFTRIRPAIMDDGGDIEFVKFIPD 174
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V LK++G+C SC SS VTL+NG+++ML++YI E
Sbjct: 175 NGKVLLKLKGACRSCESSSVTLRNGIESMLKYYIEE 210
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKEL+ TRIRP + +DGGDI+F+ F
Sbjct: 146 MIKELIFTRIRPAIMDDGGDIEFVKF 171
>gi|259415063|ref|ZP_05738985.1| NifU domain protein [Silicibacter sp. TrichCH4B]
gi|259348973|gb|EEW60727.1| NifU domain protein [Silicibacter sp. TrichCH4B]
Length = 187
Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 109/164 (66%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ +AA SPL + +F + GV VFFG+DF+TVTK DD V+W +KP
Sbjct: 18 PGQTVLDAGTADFPSAEAASKSPLAQRIFAVSGVTGVFFGNDFVTVTK-DDSVEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQP-SSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDI 145
+ +M+ + SG PV+ + Q +S H +D E V IKELLD+R+RP V +DGGDI
Sbjct: 77 AVLGAVMEHYQSGQPVIDEGQQQASGHAEHTGEDGEIVNQIKELLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F GV+
Sbjct: 117 IKELLDSRVRPAVAQDGGDITFHGFDRGVV 146
>gi|353237443|emb|CCA69416.1| related to NFU-1 protein (iron homeostasis) [Piriformospora indica
DSM 11827]
Length = 261
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/165 (49%), Positives = 113/165 (68%), Gaps = 12/165 (7%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ +F ++A SPL L +EGV+SVFFG DF+TV+K D W ++KP
Sbjct: 63 PGQTVMGTGSAEFTDTRSALASPLAIRLMGVEGVRSVFFGPDFVTVSKVSD-TPWSIVKP 121
Query: 88 EIFATIMDFFSSGLPVLTDAQPSS-----DTVIHEDDDETVQMIKELLDTRIRPTVQEDG 142
EI++T+M+FF+S P+ + + DT I + D ETV MIKELL+TR+RP + EDG
Sbjct: 122 EIYSTLMEFFTSKQPLFRTEEERNLAGPQDTRILDTDSETVAMIKELLETRVRPAIMEDG 181
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GDI++ F+ G VK+K++GSC C SS VTLKNG++NM++ YIPE
Sbjct: 182 GDIEYRGFEDGTVKVKLKGSCRGCDSSTVTLKNGIENMMRHYIPE 226
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 27/32 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TR+RP + EDGGDI++ F+DG ++
Sbjct: 164 MIKELLETRVRPAIMEDGGDIEYRGFEDGTVK 195
>gi|399991613|ref|YP_006571853.1| nitrogen fixation protein nifU-like protein [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
gi|400753252|ref|YP_006561620.1| nitrogen fixation protein nifU-like protein [Phaeobacter
gallaeciensis 2.10]
gi|398652405|gb|AFO86375.1| nitrogen fixation protein nifU-like protein [Phaeobacter
gallaeciensis 2.10]
gi|398656168|gb|AFO90134.1| nitrogen fixation protein nifU-like protein [Phaeobacter
gallaeciensis DSM 17395 = CIP 105210]
Length = 187
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFPT AA SPL + +F + GV VFFG+DF+TVTK D V+W +KP
Sbjct: 18 PGQTVLEMGTADFPTADAAGSSPLAQRIFAVSGVTGVFFGNDFVTVTKADT-VEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDA--QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
I +M+ F SG PV+++ Q S +D E V IKELLD+R+RP V +DGGDI
Sbjct: 77 AILGAVMEHFQSGQPVISEGGEQTSGHAEHTGEDGEIVNQIKELLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F GV+
Sbjct: 117 IKELLDSRVRPAVAQDGGDITFHGFDRGVV 146
>gi|126725029|ref|ZP_01740872.1| nifU domain protein [Rhodobacterales bacterium HTCC2150]
gi|126706193|gb|EBA05283.1| nifU domain protein [Rhodobacteraceae bacterium HTCC2150]
Length = 187
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 107/162 (66%), Gaps = 9/162 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ + A SPL +F I+G+ VFFG+DF+TVTK ++ +W +KP
Sbjct: 18 PGQTVLETGTADFPSAETADQSPLATRIFGIQGIAGVFFGNDFVTVTKAENS-EWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLT--DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
I IM+ F SG PVL+ + P+ +E+D E V IKELLDTR+RP V +DGGDI
Sbjct: 77 AILGAIMEHFQSGQPVLSGENTAPAHAEAANEEDKEIVGQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F G+V L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 TFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 178
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F G++
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFDRGIV 146
>gi|118356024|ref|XP_001011271.1| NifU-like domain containing protein [Tetrahymena thermophila]
gi|89293038|gb|EAR91026.1| NifU-like domain containing protein [Tetrahymena thermophila SB210]
Length = 225
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 107/157 (68%), Gaps = 3/157 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T+DF + A+ SPL K LF I+GV VF+G D+I+++K++D DW LKP+IF+ I
Sbjct: 51 GTTLDFIAARYAHVSPLAKKLFTIDGVNRVFYGKDYISISKKED-ADWNELKPQIFSLIT 109
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--G 152
+ F+ P+ TD DT I +DD E VQMIKE++DTRIRP VQ+DGGD+ + +F
Sbjct: 110 EQFTGTTPLFTDEPEREDTKIKDDDSEAVQMIKEIIDTRIRPLVQDDGGDVIYRNFDEPS 169
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
G+V L M GSC+ CPSS VTLK G++ M+ Y+PE
Sbjct: 170 GIVTLTMMGSCSGCPSSQVTLKQGIEKMIMHYVPEVN 206
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD--GV--LEEPGQTIDFPTGQAAYCSPLGKLLF 56
MIKE++DTRIRP VQ+DGGD+ + +F + G+ L G P+ Q + K++
Sbjct: 140 MIKEIIDTRIRPLVQDDGGDVIYRNFDEPSGIVTLTMMGSCSGCPSSQVTLKQGIEKMIM 199
Query: 57 R----IEGVKSVFFGHD 69
+ GV+SV +G +
Sbjct: 200 HYVPEVNGVESVDYGEN 216
>gi|388856322|emb|CCF50131.1| related to NFU-1 protein (iron homeostasis) [Ustilago hordei]
Length = 283
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 111/157 (70%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F +++ SPL K LF I G+ SVF+G DFITV+K D W LKPEI++ IM+F
Sbjct: 88 THEFLDTRSSMASPLAKKLFSIPGIVSVFYGPDFITVSK-DASHQWSTLKPEIYSCIMEF 146
Query: 97 FSSGLPVLTDAQPS---SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--- 150
F++G P+ D++ S SDTVI + D E V MIKELLDTR+RP +QEDGGD+++ F
Sbjct: 147 FTAGHPLFADSESSHGSSDTVILDTDSEVVAMIKELLDTRVRPAIQEDGGDLEYRGFGED 206
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VK+K++GSC C SS VTLK+G++ ML+ YIPE
Sbjct: 207 TDGIVKVKLKGSCRGCDSSTVTLKSGIERMLKHYIPE 243
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%), Gaps = 3/35 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF---QDGVLE 32
MIKELLDTR+RP +QEDGGD+++ F DG+++
Sbjct: 178 MIKELLDTRVRPAIQEDGGDLEYRGFGEDTDGIVK 212
>gi|332557651|ref|ZP_08411973.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides WS8N]
gi|332275363|gb|EGJ20678.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides WS8N]
Length = 186
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 104/161 (64%), Gaps = 8/161 (4%)
Query: 34 PGQ------TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ T DF T +AA SPL + +F + GV +VFFG DF+ VTK D+ V W +KP
Sbjct: 18 PGQMVLEAGTADFATPEAAATSPLARRIFAVGGVSAVFFGTDFVAVTKADE-VAWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDE-TVQMIKELLDTRIRPTVQEDGGDIQ 146
I IM+ + SG PVL Q +S H+ DE V+ IKELLDTR+RP V +DGGDI
Sbjct: 77 AILGAIMEHYQSGAPVLEGEQAASGHASHDGPDEDVVRQIKELLDTRVRPAVAQDGGDIT 136
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F G+V L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 FHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 177
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F G++
Sbjct: 116 IKELLDTRVRPAVAQDGGDITFHGFDRGIV 145
>gi|84500284|ref|ZP_00998550.1| nifU domain protein [Oceanicola batsensis HTCC2597]
gi|84392218|gb|EAQ04486.1| nifU domain protein [Oceanicola batsensis HTCC2597]
Length = 187
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/164 (51%), Positives = 107/164 (65%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ + + SPL LF +EGV VFFG DF+TVTK D+ W +KP
Sbjct: 18 PGQTVLEAGTADFPSAETSGKSPLAARLFAVEGVTGVFFGTDFVTVTKADE-TQWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVL-TDAQPSSDTVIHE-DDDETVQMIKELLDTRIRPTVQEDGGDI 145
+ IM+ + SG PV+ T QP+S HE +D E V IKELLDTR+RP V +DGGDI
Sbjct: 77 ALLGAIMEHYQSGQPVMATGDQPTSGHADHEGEDQEIVVQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLYMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F GV+
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFDRGVV 146
>gi|281208054|gb|EFA82232.1| NIF system FeS cluster assembly domain-containing protein
[Polysphondylium pallidum PN500]
Length = 307
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 115/156 (73%), Gaps = 3/156 (1%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
PG+TIDFP +++ SPL +F+++GV VF+G DFI+V K + +W +LKP++F I
Sbjct: 120 PGKTIDFPDFKSSQISPLANAIFKLDGVNRVFYGPDFISVNKFPEH-EWAILKPQVFGAI 178
Query: 94 MDFFSSGLPVLTDA--QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
+DF+ S P+L++ +SDT+I +DDETV MIKEL++TR+RPT+ +DGG+IQ++ F+
Sbjct: 179 IDFYHSDKPLLSETPTNENSDTLILPEDDETVAMIKELIETRVRPTLLDDGGNIQYLGFK 238
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V +K+QG+C+SC SS TLK G++ ML +I E
Sbjct: 239 DGIVLVKLQGTCSSCSSSQATLKGGIERMLMHWISE 274
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 29/31 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKEL++TR+RPT+ +DGG+IQ++ F+DG++
Sbjct: 212 MIKELIETRVRPTLLDDGGNIQYLGFKDGIV 242
>gi|224009450|ref|XP_002293683.1| nifu-like protein [Thalassiosira pseudonana CCMP1335]
gi|220970355|gb|EED88692.1| nifu-like protein [Thalassiosira pseudonana CCMP1335]
Length = 210
Score = 163 bits (413), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 108/150 (72%), Gaps = 4/150 (2%)
Query: 49 SPLGKLLFRIE-GVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
SPL K LF ++ G+KS++ G+DFITVTK + W+ L+ IF IMDF++SG P L
Sbjct: 57 SPLAKQLFNLDIGIKSLYLGYDFITVTKFAE-AHWQHLQTPIFGAIMDFYASGKPALRGE 115
Query: 108 QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTS 165
+DT I EDDDE V MIKELL++RIRP VQEDGGDI+++ F + G+V +++ GSC
Sbjct: 116 PEITDTTILEDDDEVVAMIKELLESRIRPAVQEDGGDIRYVGFEEETGLVTVQLAGSCVG 175
Query: 166 CPSSVVTLKNGVQNMLQFYIPETTPGLNME 195
CPSS VTLKNGV+NML YIPE T +++E
Sbjct: 176 CPSSSVTLKNGVENMLMHYIPEVTAVISLE 205
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 26/28 (92%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL++RIRP VQEDGGDI+++ F++
Sbjct: 133 MIKELLESRIRPAVQEDGGDIRYVGFEE 160
>gi|254453730|ref|ZP_05067167.1| NifU domain protein [Octadecabacter arcticus 238]
gi|198268136|gb|EDY92406.1| NifU domain protein [Octadecabacter arcticus 238]
Length = 186
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 104/161 (64%), Gaps = 8/161 (4%)
Query: 34 PGQ------TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ T DFP+ +AA SPL +F +EGV VFFG DFITVTK DD V+W +KP
Sbjct: 18 PGQNVLEVGTADFPSVEAAGKSPLAGRIFGVEGVTGVFFGTDFITVTKADD-VEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDIQ 146
I +M+ + SG V+T Q S H +D + V IKELLDTR+RP V +DGGDI
Sbjct: 77 AILGAVMEHYQSGAAVMTGEQAGSGHAEHTGEDADIVNQIKELLDTRVRPAVAQDGGDIT 136
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 FHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 177
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F GV+
Sbjct: 116 IKELLDTRVRPAVAQDGGDITFHGFDRGVV 145
>gi|448535837|ref|XP_003871029.1| hypothetical protein CORT_0G02230 [Candida orthopsilosis Co 90-125]
gi|380355385|emb|CCG24904.1| hypothetical protein CORT_0G02230 [Candida orthopsilosis]
Length = 253
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 78/159 (49%), Positives = 115/159 (72%), Gaps = 7/159 (4%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T +F +G+ A+ SPL LF ++G+KS+ FG +FIT+ K ++W+LLKPEIF+ +
Sbjct: 68 NETREFLSGREAHSSPLAVKLFSVDGIKSIMFGSNFITIEKSPH-IEWQLLKPEIFSILT 126
Query: 95 DFFSSGLPVLT----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
++ ++GLPV+ DA +SD +EDDDE V MIKEL+ TRIRP +Q+DGGDI+F+ F
Sbjct: 127 EYLTNGLPVINLDGEDAALASDVAFNEDDDEVVSMIKELIFTRIRPAIQDDGGDIEFVDF 186
Query: 151 Q--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V LK++G+C +C SS VTLKNG+++ML+ YI E
Sbjct: 187 RESDGTVFLKLKGACRTCDSSSVTLKNGIESMLKHYIEE 225
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKEL+ TRIRP +Q+DGGDI+F+ F++
Sbjct: 161 MIKELIFTRIRPAIQDDGGDIEFVDFRES 189
>gi|308802059|ref|XP_003078343.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
gi|116056795|emb|CAL53084.1| NifU-like domain-containing proteins (ISS) [Ostreococcus tauri]
Length = 244
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 111/164 (67%), Gaps = 10/164 (6%)
Query: 33 EPGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
+PG+ + +F + + A SPL + LF I+GV +VF G DFITVTK D D DW+ +K
Sbjct: 56 QPGRDVYAEGSRNFGSAREAMVSPLARRLFAIDGVTNVFLGVDFITVTK-DADHDWETVK 114
Query: 87 PEIFATIMDFFSSGLPVLTDAQ-PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
P F IMDF++SG V+ +A T I EDDDE V MIKELL+TRIRP V EDGGDI
Sbjct: 115 PRTFEAIMDFYASGEAVVDEASLEGHGTAIEEDDDEVVAMIKELLETRIRPAVAEDGGDI 174
Query: 146 QFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F ++ + GVV +++ G+C CPSS VTLK+G++NML Y+PE
Sbjct: 175 VFKAYDQETGVVSVQLMGACDGCPSSSVTLKSGIENMLMHYVPE 218
Score = 43.5 bits (101), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP V EDGGDI F ++
Sbjct: 154 MIKELLETRIRPAVAEDGGDIVFKAY 179
>gi|46201919|ref|ZP_00054106.2| COG0694: Thioredoxin-like proteins and domains [Magnetospirillum
magnetotacticum MS-1]
Length = 182
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 103/152 (67%), Gaps = 5/152 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF A SPL LF IEGV SVF G DFITV K D DW+++KP++ A IMD
Sbjct: 27 TADFAEASRASGSPLATRLFAIEGVGSVFLGTDFITVAKADS-ADWQVVKPQVLAAIMDH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHE-DDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
++SG PV+ P S+ DDD V IKELLDTR+RP V +DGGDI F +F+ G+V
Sbjct: 86 YNSGDPVI---NPGSEAASASGDDDGIVMQIKELLDTRVRPAVAQDGGDIIFRAFEDGIV 142
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L +QG+C+ CPSS TLK+G++NML++Y+PE
Sbjct: 143 YLHLQGACSGCPSSSATLKHGIENMLKYYVPE 174
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F +F+DG++
Sbjct: 113 IKELLDTRVRPAVAQDGGDIIFRAFEDGIV 142
>gi|68490038|ref|XP_711140.1| hypothetical protein CaO19.6283 [Candida albicans SC5314]
gi|68490075|ref|XP_711122.1| hypothetical protein CaO19.13662 [Candida albicans SC5314]
gi|46432400|gb|EAK91883.1| hypothetical protein CaO19.13662 [Candida albicans SC5314]
gi|46432419|gb|EAK91901.1| hypothetical protein CaO19.6283 [Candida albicans SC5314]
Length = 262
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 115/163 (70%), Gaps = 11/163 (6%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
QT +F +G+ A SPL LF I+G++SV FG DFIT+ K ++ DW LLKPEIF+ +
Sbjct: 57 NQTKEFLSGREAASSPLALKLFSIDGIRSVMFGSDFITIEKSNN-FDWSLLKPEIFSILT 115
Query: 95 DFFSSGLPVLT--------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
++ ++G P+L ++ ++D I+EDDDE V MIKEL+ TRIRP +Q+DGGDI+
Sbjct: 116 EYLTNGTPILLEDNVDEYGNSLLTNDMAINEDDDEVVSMIKELIFTRIRPAIQDDGGDIE 175
Query: 147 FISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F++F + G V L+++G+C SC SS VTLKNG+++ML+ YI E
Sbjct: 176 FVNFNEEDGTVYLRLKGACRSCDSSSVTLKNGIESMLKHYIEE 218
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 25/28 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKEL+ TRIRP +Q+DGGDI+F++F +
Sbjct: 154 MIKELIFTRIRPAIQDDGGDIEFVNFNE 181
>gi|56695297|ref|YP_165645.1| NifU domain-containing protein [Ruegeria pomeroyi DSS-3]
gi|56677034|gb|AAV93700.1| nifU domain protein [Ruegeria pomeroyi DSS-3]
Length = 187
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ +AA SPL +F + GV VFFG+DF+TVTK + V+W +KP
Sbjct: 18 PGQTVLEVGTADFPSAEAAEKSPLAARIFAVSGVTGVFFGNDFVTVTKAEG-VEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVL-TDAQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDI 145
I +M+ + SG PV+ DAQ S H +D E V IK LLD+R+RP V +DGGDI
Sbjct: 77 AILGAVMEHYQSGQPVMGADAQTGSGHAEHSGEDAEVVTQIKALLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 42.4 bits (98), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK LLD+R+RP V +DGGDI F F GV+
Sbjct: 117 IKALLDSRVRPAVAQDGGDITFHGFDRGVV 146
>gi|238880174|gb|EEQ43812.1| HIRA-interacting protein 5 [Candida albicans WO-1]
Length = 262
Score = 162 bits (411), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 115/163 (70%), Gaps = 11/163 (6%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
QT +F +G+ A SPL LF I+G++SV FG DFIT+ K ++ DW LLKPEIF+ +
Sbjct: 57 NQTKEFLSGREAASSPLALKLFSIDGIRSVMFGSDFITIEKSNN-FDWSLLKPEIFSILT 115
Query: 95 DFFSSGLPVLT--------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
++ ++G P+L ++ ++D I+EDDDE V MIKEL+ TRIRP +Q+DGGDI+
Sbjct: 116 EYLTNGTPILLEDNVDEYGNSLLTNDMAINEDDDEVVSMIKELIFTRIRPAIQDDGGDIE 175
Query: 147 FISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F++F + G V L+++G+C SC SS VTLKNG+++ML+ YI E
Sbjct: 176 FVNFNEEDGTVYLRLKGACRSCDSSSVTLKNGIESMLKHYIEE 218
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 25/28 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKEL+ TRIRP +Q+DGGDI+F++F +
Sbjct: 154 MIKELIFTRIRPAIQDDGGDIEFVNFNE 181
>gi|85705721|ref|ZP_01036818.1| nifU domain protein [Roseovarius sp. 217]
gi|85669711|gb|EAQ24575.1| nifU domain protein [Roseovarius sp. 217]
Length = 187
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFPT + A SPL + +FR+ GV VFFG+DF+TVTK + +W +KP
Sbjct: 18 PGQTVLDAGTADFPTAEGAEKSPLAERIFRVPGVSGVFFGNDFVTVTK-GEATEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPV-LTDAQPSSDTVIHE-DDDETVQMIKELLDTRIRPTVQEDGGDI 145
I IM+ + SG PV L + +S H +D E V IKELLDTR+RP V +DGGDI
Sbjct: 77 AILGAIMEHYQSGQPVMLGEGGGASGHAEHSGEDSEIVNQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRHYIPEVT 180
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F GV+
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFDRGVV 146
>gi|68492023|ref|XP_710207.1| hypothetical protein CaO19.3485 [Candida albicans SC5314]
gi|46431364|gb|EAK90941.1| hypothetical protein CaO19.3485 [Candida albicans SC5314]
Length = 262
Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 115/163 (70%), Gaps = 11/163 (6%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
QT +F +G+ A SPL LF I+G++SV FG DFIT+ K ++ DW LLKPEIF+ +
Sbjct: 57 NQTKEFLSGREAASSPLALKLFSIDGIRSVMFGSDFITIEKSNN-FDWSLLKPEIFSILT 115
Query: 95 DFFSSGLPVLT--------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
++ ++G P+L ++ ++D I+EDDDE V MIKEL+ TRIRP +Q+DGGDI+
Sbjct: 116 EYLTNGTPILLEDNVDEYGNSLLTNDMAINEDDDEVVSMIKELIFTRIRPAIQDDGGDIE 175
Query: 147 FISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F++F + G V L+++G+C SC SS VTLKNG+++ML+ YI E
Sbjct: 176 FVNFNEEDGTVYLRLKGACRSCDSSSVTLKNGIESMLKHYIEE 218
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 25/28 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKEL+ TRIRP +Q+DGGDI+F++F +
Sbjct: 154 MIKELIFTRIRPAIQDDGGDIEFVNFNE 181
>gi|323451223|gb|EGB07101.1| hypothetical protein AURANDRAFT_54041 [Aureococcus anophagefferens]
Length = 232
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 83/152 (54%), Positives = 103/152 (67%), Gaps = 5/152 (3%)
Query: 40 FPTGQAAYC-SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
F G Y SPL K LF I+GV +F DF+TV+K +D W +KP +F IMDF++
Sbjct: 52 FHRGDTEYLRSPLAKKLFAIDGVTGIFLARDFVTVSKNEDGA-WATIKPHVFGHIMDFYA 110
Query: 99 SGLPVLTDAQPS-SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVV 155
GLP + DA P+ SDT+I +DD E V MIKEL++ RIRP VQEDGGDI F F GVV
Sbjct: 111 EGLPAVEDALPAASDTLITDDDSEVVAMIKELVEARIRPAVQEDGGDIFFRGFDEATGVV 170
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
K+++ GSC CPSS VTL+NGV+NML YI E
Sbjct: 171 KVELAGSCVGCPSSSVTLRNGVENMLMHYIAE 202
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV----LEEPGQTIDFPTGQAAYCSPLGKLLF 56
MIKEL++ RIRP VQEDGGDI F F + +E G + P+ + + +L
Sbjct: 138 MIKELVEARIRPAVQEDGGDIFFRGFDEATGVVKVELAGSCVGCPSSSVTLRNGVENMLM 197
Query: 57 R-IEGVKSVFFGHDFITVTKQDDDVDWKL 84
I VK++ VT DD D+KL
Sbjct: 198 HYIAEVKAI------ENVTPDDDADDFKL 220
>gi|126461658|ref|YP_001042772.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17029]
gi|221638629|ref|YP_002524891.1| nitrogen-fixing NifU domain-containing protein [Rhodobacter
sphaeroides KD131]
gi|126103322|gb|ABN76000.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17029]
gi|221159410|gb|ACM00390.1| Nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides KD131]
Length = 186
Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 103/161 (63%), Gaps = 8/161 (4%)
Query: 34 PGQ------TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ T DF T +AA SPL + +F GV +VFFG DF+ VTK D+ V W +KP
Sbjct: 18 PGQMVLEAGTADFATPEAAATSPLARRIFAAGGVSAVFFGTDFVAVTKADE-VAWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDE-TVQMIKELLDTRIRPTVQEDGGDIQ 146
I IM+ + SG PVL Q +S H+ DE V+ IKELLDTR+RP V +DGGDI
Sbjct: 77 AILGAIMEHYQSGAPVLEGEQAASGHASHDGPDEDVVRQIKELLDTRVRPAVAQDGGDIT 136
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F G+V L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 FHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 177
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F G++
Sbjct: 116 IKELLDTRVRPAVAQDGGDITFHGFDRGIV 145
>gi|190345080|gb|EDK36900.2| hypothetical protein PGUG_00997 [Meyerozyma guilliermondii ATCC
6260]
Length = 236
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 113/160 (70%), Gaps = 4/160 (2%)
Query: 29 GVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPE 88
+L+E +T++F +G+ A SPL LF ++G+KSV FG +FIT+ K + W ++KPE
Sbjct: 47 SILKE-NETLEFLSGREAARSPLAVKLFSVDGIKSVMFGSNFITIEKSANSNQWAVMKPE 105
Query: 89 IFATIMDFFSSGLPVLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
IF+ + + ++G PV+ D + S+D I+EDDDE V MIKEL+ TRIRP +QEDGGDI+F
Sbjct: 106 IFSILTEHLTTGAPVINDEYELSNDMEINEDDDEVVAMIKELIFTRIRPAIQEDGGDIEF 165
Query: 148 ISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYI 185
F G V LK++G+C SC SS VTLKNG+++ML+ YI
Sbjct: 166 AKFDEDSGTVYLKLKGACRSCESSSVTLKNGIESMLKHYI 205
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKEL+ TRIRP +QEDGGDI+F F +
Sbjct: 143 MIKELIFTRIRPAIQEDGGDIEFAKFDE 170
>gi|372278137|ref|ZP_09514173.1| nitrogen-fixing NifU-like protein [Oceanicola sp. S124]
Length = 187
Score = 162 bits (409), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 106/164 (64%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ + A SPL K LF ++GV +FFG DFITVTK+D ++W LKP
Sbjct: 18 PGQTVLDAGTADFPSAETAEKSPLAKRLFSVDGVTGIFFGTDFITVTKRDG-LEWDHLKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHED--DDETVQMIKELLDTRIRPTVQEDGGDI 145
+ IM+ + SG PV+ A+ + D D E V IKELLDTR+RP V +DGGDI
Sbjct: 77 ALLGGIMEHYQSGEPVMGGAEGVASGHAEHDGPDGEIVGQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F GV+
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFDRGVV 146
>gi|210075172|ref|XP_500339.2| YALI0B00264p [Yarrowia lipolytica]
gi|199425114|emb|CAG82553.2| YALI0B00264p [Yarrowia lipolytica CLIB122]
Length = 263
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/158 (50%), Positives = 108/158 (68%), Gaps = 4/158 (2%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T++F +G+ A+ SPL K LF ++GV+SV FG DFITV K D W LKPE+F+ +
Sbjct: 71 GHTVEFTSGREAHSSPLAKKLFGVDGVRSVMFGSDFITVEKAQD-THWNTLKPEVFSILT 129
Query: 95 DFFSSGLPVLTDAQPSS-DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--Q 151
+ ++G P++ + ++ DT +DD E V MIKEL++TRIRP +QEDGGDI F F
Sbjct: 130 EHITAGAPIVMEGTTAAEDTAPCDDDSEVVSMIKELIETRIRPAIQEDGGDIAFRGFDED 189
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
GVV LK+ G+C SC SS VTLKNG+++ML Y+ E T
Sbjct: 190 TGVVHLKLLGACRSCDSSAVTLKNGIESMLMHYVEEVT 227
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKEL++TRIRP +QEDGGDI F F +
Sbjct: 161 MIKELIETRIRPAIQEDGGDIAFRGFDE 188
>gi|114764450|ref|ZP_01443675.1| nifU domain protein [Pelagibaca bermudensis HTCC2601]
gi|114543017|gb|EAU46036.1| nifU domain protein [Roseovarius sp. HTCC2601]
Length = 186
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 80/163 (49%), Positives = 102/163 (62%), Gaps = 8/163 (4%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ + SPL K LF + GV VF G DF+TVTK D DW +KP
Sbjct: 18 PGQTVLGAGTADFPSAEGTDASPLAKRLFGVTGVTGVFLGSDFVTVTKADG-ADWDHVKP 76
Query: 88 EIFATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
+ IM+ F SG PV+ + S +D+E V IKELLD+R+RP V +DGGDI
Sbjct: 77 AVLGAIMEHFQSGEPVMAGEGGASGHAAFEGEDEEIVGQIKELLDSRVRPAVAQDGGDIT 136
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F+ GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 FHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 179
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F+ GV+
Sbjct: 116 IKELLDSRVRPAVAQDGGDITFHGFERGVV 145
>gi|340027770|ref|ZP_08663833.1| NifU domain-containing protein [Paracoccus sp. TRP]
Length = 184
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PG+T+ DFP +AA SPL + +F + GV VF G DF+TVTK DD V W LKP
Sbjct: 18 PGETVLGDGTADFPAPEAAATSPLARRIFAVPGVTGVFLGSDFVTVTKADDAV-WDHLKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ IM+ + SG P + A S+ D E V IKELLDTR+RP V +DGGDI F
Sbjct: 77 SVLGAIMEHYQSGAPAIEGATGSAHNDQTGPDAEIVNQIKELLDTRVRPAVAQDGGDITF 136
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 HGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 178
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F GV+
Sbjct: 115 IKELLDTRVRPAVAQDGGDITFHGFDRGVV 144
>gi|452965143|gb|EME70170.1| HIRA-interacting protein 5 [Magnetospirillum sp. SO-1]
Length = 182
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 103/152 (67%), Gaps = 5/152 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF A SPL LF IEGV SVF G DFITV K D DW+++KP++ A IMD
Sbjct: 27 TADFAEASRAAGSPLATRLFAIEGVGSVFLGTDFITVAKIDA-ADWQVVKPQVLAAIMDH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHE-DDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
++SG PV+ P S+ DDD V IKELLDTR+RP V +DGGDI F +F+ G+V
Sbjct: 86 YNSGDPVI---NPGSEAAAATGDDDGIVMQIKELLDTRVRPAVAQDGGDIIFRAFEDGIV 142
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L +QG+C+ CPSS TLK+G++NML++Y+PE
Sbjct: 143 YLHLQGACSGCPSSSATLKHGIENMLKYYVPE 174
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F +F+DG++
Sbjct: 113 IKELLDTRVRPAVAQDGGDIIFRAFEDGIV 142
>gi|424513425|emb|CCO66047.1| predicted protein [Bathycoccus prasinos]
Length = 311
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/162 (50%), Positives = 111/162 (68%), Gaps = 8/162 (4%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
E +++F + + + SPL K LF I+GV VFFG DF+TVTK + DW++LKPE+FA
Sbjct: 126 EDSSSMNFSSARESMRSPLAKSLFTIDGVTGVFFGADFVTVTKSEA-FDWEMLKPEVFAK 184
Query: 93 IMDFFSSGLPVLTDAQPSSDTV-----IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
IMDF++SG PV+ + + I + D ETV MIKELL+TRI+P V EDGGDI F
Sbjct: 185 IMDFYASGEPVVKEENGEVEEADDPNRILDTDSETVAMIKELLETRIKPAVAEDGGDIAF 244
Query: 148 ISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F Q G+V ++++G+C CPSS VTLK+G++NML Y+PE
Sbjct: 245 KKFDEQDGLVYVELRGACDGCPSSTVTLKSGIENMLMHYVPE 286
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%), Gaps = 2/33 (6%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGVL 31
MIKELL+TRI+P V EDGGDI F F QDG++
Sbjct: 222 MIKELLETRIKPAVAEDGGDIAFKKFDEQDGLV 254
>gi|241959110|ref|XP_002422274.1| nifU-like protein, mitochondrial precursor, putative; protein
involved in iron metabolism in mitochondria, putative
[Candida dubliniensis CD36]
gi|223645619|emb|CAX40278.1| nifU-like protein, mitochondrial precursor, putative [Candida
dubliniensis CD36]
Length = 302
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 115/163 (70%), Gaps = 11/163 (6%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
QT +F +G+ A SPL LF I+G++SV FG DFIT+ K ++ DW LLKPEIF+ +
Sbjct: 102 NQTKEFLSGREAASSPLALKLFSIDGIRSVMFGSDFITIEKLNN-FDWSLLKPEIFSILT 160
Query: 95 DFFSSGLPVLT--------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
++ ++G P+L ++ ++D I+EDDDE V MIKEL+ TRIRP +Q+DGGDI+
Sbjct: 161 EYLTNGTPILLEDGVDEDGNSLLTNDMAINEDDDEVVSMIKELIFTRIRPAIQDDGGDIE 220
Query: 147 FISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F++F + G V L+++G+C SC SS VTLKNG+++ML+ YI E
Sbjct: 221 FVNFNEEDGTVYLRLKGACRSCDSSSVTLKNGIESMLKHYIEE 263
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 25/28 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKEL+ TRIRP +Q+DGGDI+F++F +
Sbjct: 199 MIKELIFTRIRPAIQDDGGDIEFVNFNE 226
>gi|83943871|ref|ZP_00956328.1| nifU domain protein [Sulfitobacter sp. EE-36]
gi|83953512|ref|ZP_00962234.1| nifU domain protein [Sulfitobacter sp. NAS-14.1]
gi|83842480|gb|EAP81648.1| nifU domain protein [Sulfitobacter sp. NAS-14.1]
gi|83845118|gb|EAP82998.1| nifU domain protein [Sulfitobacter sp. EE-36]
Length = 186
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/164 (50%), Positives = 105/164 (64%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP +AA SPL LF +EGV VFFG DF+T+TK D ++W LKP
Sbjct: 18 PGQTVLEMGTADFPAPEAASASPLATRLFAVEGVTGVFFGTDFVTITKADG-IEWDHLKP 76
Query: 88 EIFATIMDFFSSGLPVL-TDAQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDI 145
+ IM+ F SG PV+ T +S H +D V IKELLD+R+RP V +DGGDI
Sbjct: 77 ALLGAIMEHFQSGQPVMETGHDHASGHAEHTGEDGAIVGQIKELLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F+ GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F+ GV+
Sbjct: 117 IKELLDSRVRPAVAQDGGDITFHGFERGVV 146
>gi|164657977|ref|XP_001730114.1| hypothetical protein MGL_2496 [Malassezia globosa CBS 7966]
gi|159104009|gb|EDP42900.1| hypothetical protein MGL_2496 [Malassezia globosa CBS 7966]
Length = 276
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 110/157 (70%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F +++ SPL K LF ++GV VF+G DF+TVTK D D W +KPE+++T+M+F
Sbjct: 82 TAEFLDQRSSMTSPLAKDLFALDGVSGVFYGPDFVTVTK-DTDTPWSAIKPEVYSTMMEF 140
Query: 97 FSSGLPVLTD---AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--- 150
F++G + D AQP SDT I + D E V MIKELLDTR+RP +QEDGGD+++ F
Sbjct: 141 FTAGHSLFPDPSSAQPGSDTTILDTDSEVVAMIKELLDTRVRPAIQEDGGDLEYRGFGED 200
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V++K++GSC C SS VTLK+G++ ML Y+PE
Sbjct: 201 SDGIVRVKLKGSCRGCDSSTVTLKSGIERMLMHYVPE 237
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 27/35 (77%), Gaps = 3/35 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF---QDGVLE 32
MIKELLDTR+RP +QEDGGD+++ F DG++
Sbjct: 172 MIKELLDTRVRPAIQEDGGDLEYRGFGEDSDGIVR 206
>gi|330799706|ref|XP_003287883.1| hypothetical protein DICPUDRAFT_20344 [Dictyostelium purpureum]
gi|325082086|gb|EGC35580.1| hypothetical protein DICPUDRAFT_20344 [Dictyostelium purpureum]
Length = 203
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 109/155 (70%), Gaps = 3/155 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
GQ +DFP +++ SPL LF+IEGV VFF DFI+V K + DW LKPEI+ I+
Sbjct: 29 GQIMDFPDFKSSQVSPLANSLFKIEGVNRVFFSSDFISVNKYPEQ-DWAALKPEIYGAII 87
Query: 95 DFFSSGLPVLTDAQP--SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
DF++SG P+L++ ++DT I +D E V MIKEL++TRIRPTV EDGG+I+++ F
Sbjct: 88 DFYNSGSPILSEHSSDINTDTTILPEDSEVVAMIKELIETRIRPTVLEDGGNIKYMGFAD 147
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V +++QG+C+SC SS TLK G++ ML +I E
Sbjct: 148 GIVLVQLQGTCSSCSSSQATLKGGIERMLMHWIAE 182
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKEL++TRIRPTV EDGG+I+++ F DG++
Sbjct: 120 MIKELIETRIRPTVLEDGGNIKYMGFADGIV 150
>gi|365888602|ref|ZP_09427356.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. STM
3809]
gi|365335725|emb|CCD99887.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. STM
3809]
Length = 189
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 112/171 (65%), Gaps = 9/171 (5%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + P T++F + AA SPL + LF ++GV SVF+G DFITVTK D + W+
Sbjct: 14 LKFIPGRIVLPTGTMEFASRDAAARSPLAERLFAVDGVTSVFYGADFITVTKSDGE--WQ 71
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDD-------ETVQMIKELLDTRIRP 136
LKP I IM+ + SG P+L D ++D EDD+ ETV MIK+L+++R+RP
Sbjct: 72 HLKPAILGAIMEHYMSGAPLLADGSAANDESADEDDEFYDEADTETVGMIKDLIESRVRP 131
Query: 137 TVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V DGGDI F F+ G+V L M+G+C+ CPSS TL++G+QN+L+ ++PE
Sbjct: 132 AVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFVPE 182
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L+++R+RP V DGGDI F F+DG++
Sbjct: 120 MIKDLIESRVRPAVANDGGDITFRGFKDGIV 150
>gi|328545933|ref|YP_004306042.1| nitrogen-fixing NifU-like protein [Polymorphum gilvum SL003B-26A1]
gi|326415673|gb|ADZ72736.1| Nitrogen-fixing NifU-like protein [Polymorphum gilvum SL003B-26A1]
Length = 185
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/154 (51%), Positives = 104/154 (67%), Gaps = 5/154 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + A SPL + LF + GV +VFFGHDFITVTK DD DW+ +KP I IM+
Sbjct: 27 TYDFRSSDEAGASPLAEKLFAVPGVVAVFFGHDFITVTK--DDTDWQHMKPAILGAIMEQ 84
Query: 97 FSSGLPVLTDAQPSS---DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
F SG PV+ A + D DD+ETV +IK+LL+TR+RP V +DGGDI F F+ G
Sbjct: 85 FMSGTPVMRSAAVQAGGEDEFFDSDDEETVTVIKDLLETRVRPAVAQDGGDITFKGFKEG 144
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VV L M+G+C CPSS TL++G+QN+L+ ++PE
Sbjct: 145 VVYLSMRGACAGCPSSTATLQHGIQNLLRHFVPE 178
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+LL+TR+RP V +DGGDI F F++GV+
Sbjct: 116 VIKDLLETRVRPAVAQDGGDITFKGFKEGVV 146
>gi|343425855|emb|CBQ69388.1| related to NFU-1 protein (iron homeostasis) [Sporisorium reilianum
SRZ2]
Length = 294
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 110/157 (70%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F +++ SPL K LF I GV SVF+G DF+TV+K D W LKPEI+++IM+F
Sbjct: 99 THEFLDTRSSMASPLAKKLFNIPGVISVFYGPDFVTVSK-DAAHQWSTLKPEIYSSIMEF 157
Query: 97 FSSGLPVLTDAQPSS---DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--- 150
F++G + TD + S DTVI + D E V MIKELLDTR+RP +QEDGGD+++ F
Sbjct: 158 FTAGHALFTDPESSHGSQDTVILDTDSEVVAMIKELLDTRVRPAIQEDGGDLEYRGFGED 217
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VK+K++GSC C SS VTLK+G++ ML+ YIPE
Sbjct: 218 TDGIVKVKLKGSCRGCDSSTVTLKSGIERMLKHYIPE 254
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%), Gaps = 3/35 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF---QDGVLE 32
MIKELLDTR+RP +QEDGGD+++ F DG+++
Sbjct: 189 MIKELLDTRVRPAIQEDGGDLEYRGFGEDTDGIVK 223
>gi|260574570|ref|ZP_05842574.1| Scaffold protein Nfu/NifU [Rhodobacter sp. SW2]
gi|259023466|gb|EEW26758.1| Scaffold protein Nfu/NifU [Rhodobacter sp. SW2]
Length = 186
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 104/161 (64%), Gaps = 8/161 (4%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ +AA SPL + +F GV SVFFG DF+TVTK D W +KP
Sbjct: 18 PGQTVLELGTADFPSAEAAGKSPLAQRIFAAGGVASVFFGTDFVTVTKTDTAA-WDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHED-DDETVQMIKELLDTRIRPTVQEDGGDIQ 146
I IM+ F SG PV+ Q +S H+ D + V+ IKELLD+R+RP V +DGGDI
Sbjct: 77 GILGAIMEHFQSGAPVIEGEQAASGHADHDGPDSDIVRQIKELLDSRVRPAVAQDGGDIT 136
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 FHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 177
Score = 44.3 bits (103), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F GV+
Sbjct: 116 IKELLDSRVRPAVAQDGGDITFHGFDRGVV 145
>gi|146337209|ref|YP_001202257.1| hypothetical protein BRADO0035 [Bradyrhizobium sp. ORS 278]
gi|146190015|emb|CAL74007.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. ORS
278]
Length = 189
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 111/171 (64%), Gaps = 9/171 (5%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + P T++F + AA SPL + LF ++GV VF+G DFITVTK D + W+
Sbjct: 14 LKFIPGRVVLPAGTMEFASRDAAARSPLAERLFAVDGVTGVFYGADFITVTKSDGE--WQ 71
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDD-------ETVQMIKELLDTRIRP 136
LKP I IM+ + SG P+L D ++D EDD+ ETV MIK+L+++R+RP
Sbjct: 72 HLKPAILGAIMEHYMSGAPLLADGSAANDASADEDDEFFDEADTETVGMIKDLIESRVRP 131
Query: 137 TVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V DGGDI F F+ G+V L M+G+C+ CPSS TL++G+QN+L+ ++PE
Sbjct: 132 AVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFVPE 182
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L+++R+RP V DGGDI F F+DG++
Sbjct: 120 MIKDLIESRVRPAVANDGGDITFRGFKDGIV 150
>gi|148251664|ref|YP_001236249.1| NifU protein [Bradyrhizobium sp. BTAi1]
gi|146403837|gb|ABQ32343.1| putative nifU protein [Bradyrhizobium sp. BTAi1]
Length = 189
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 111/171 (64%), Gaps = 9/171 (5%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + P T++F + +AA SPL + LF I GV VF+G DFITVTK D + W+
Sbjct: 14 LKFIPGRVVLPSGTMEFSSREAAARSPLAERLFAIGGVTGVFYGADFITVTKNDGE--WQ 71
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDD-------ETVQMIKELLDTRIRP 136
LKP I IM+ + SG P+L D ++D EDD+ ETV MIK+L+++R+RP
Sbjct: 72 HLKPAILGAIMEHYMSGAPLLADGSAANDDATDEDDEFYDEADTETVGMIKDLIESRVRP 131
Query: 137 TVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V DGGDI F F+ G+V L M+G+C+ CPSS TL++G+QN+L+ ++PE
Sbjct: 132 AVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFVPE 182
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L+++R+RP V DGGDI F F+DG++
Sbjct: 120 MIKDLIESRVRPAVANDGGDITFRGFKDGIV 150
>gi|381167639|ref|ZP_09876846.1| putative nifU protein (C-terminal fragment) [Phaeospirillum
molischianum DSM 120]
gi|380683393|emb|CCG41658.1| putative nifU protein (C-terminal fragment) [Phaeospirillum
molischianum DSM 120]
Length = 181
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 106/157 (67%), Gaps = 10/157 (6%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P T DF T ++A SPL LF I+G+ VF DFI+V K +D +W+++KP++ A I
Sbjct: 24 PSGTADFKTAESAVASPLASRLFAIDGIAGVFLAADFISVAKAED-AEWQVIKPQVLAAI 82
Query: 94 MDFFSSGLPV---LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
M+ FSSG PV L DA +S+ DD V IKEL++TR+RP V +DGGDI F F
Sbjct: 83 MEHFSSGQPVVEGLADAAEASE------DDALVTQIKELIETRVRPAVAQDGGDITFRGF 136
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G+V L +QG+C+ CPS+ TLK+G++NML++Y+PE
Sbjct: 137 RDGIVYLHLQGACSGCPSASATLKHGIENMLKYYVPE 173
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++TR+RP V +DGGDI F F+DG++
Sbjct: 112 IKELIETRVRPAVAQDGGDITFRGFRDGIV 141
>gi|219130127|ref|XP_002185224.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403403|gb|EEC43356.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 195
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/143 (53%), Positives = 104/143 (72%), Gaps = 3/143 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL K LF +EGVK+V+ G DF+TVTK + WK+L+P++F +M++ S P L +
Sbjct: 52 SPLAKSLFDVEGVKAVYLGGDFVTVTKYAEH-KWKILRPQLFDVLMNWADSEKPALLEMP 110
Query: 109 PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSC 166
+DT I EDDDE V MIKEL+++RIRP VQEDGGDI+++SF + G+V +++ GSC C
Sbjct: 111 EITDTTIMEDDDEIVAMIKELIESRIRPAVQEDGGDIRYVSFEEETGIVTVELAGSCVGC 170
Query: 167 PSSVVTLKNGVQNMLQFYIPETT 189
PSS VTLK GV+NML YIPE +
Sbjct: 171 PSSSVTLKQGVENMLMHYIPEVS 193
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 27/28 (96%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKEL+++RIRP VQEDGGDI+++SF++
Sbjct: 127 MIKELIESRIRPAVQEDGGDIRYVSFEE 154
>gi|83313502|ref|YP_423766.1| HIRA-interacting protein 5 [Magnetospirillum magneticum AMB-1]
gi|82948343|dbj|BAE53207.1| HIRA-interacting protein 5 [Magnetospirillum magneticum AMB-1]
Length = 190
Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/152 (51%), Positives = 103/152 (67%), Gaps = 5/152 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF A SPL LF I+GV SVF G DFITV K D DW+++KP++ A IMD
Sbjct: 35 TADFAEASRASGSPLATRLFAIDGVGSVFLGTDFITVAKLDA-ADWQVVKPQVLAAIMDH 93
Query: 97 FSSGLPVLTDAQPSSDTVIHE-DDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
++SG PV+ P S+ DDD V IKELLDTR+RP V +DGGDI F +F+ G+V
Sbjct: 94 YNSGDPVI---NPGSEAAAASGDDDGIVMQIKELLDTRVRPAVAQDGGDIIFRAFEDGIV 150
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L +QG+C+ CPSS TLK+G++NML++Y+PE
Sbjct: 151 YLHLQGACSGCPSSSATLKHGIENMLKYYVPE 182
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F +F+DG++
Sbjct: 121 IKELLDTRVRPAVAQDGGDIIFRAFEDGIV 150
>gi|260426420|ref|ZP_05780399.1| scaffold protein Nfu/NifU [Citreicella sp. SE45]
gi|260420912|gb|EEX14163.1| scaffold protein Nfu/NifU [Citreicella sp. SE45]
Length = 185
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 100/163 (61%), Gaps = 8/163 (4%)
Query: 34 PGQ------TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ T DFP A SPL + LF + GV VF G DF+TVTK DD DW +KP
Sbjct: 18 PGQAVLGAGTADFPNADGADASPLARRLFSVTGVTGVFLGSDFVTVTK-DDGADWDHVKP 76
Query: 88 EIFATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
+ IM+ F SG PV+ + S +D E V IKELLD+R+RP V +DGGDI
Sbjct: 77 AVLGAIMEHFQSGDPVMAGEGGSSGHAAFDGEDKEIVGQIKELLDSRVRPAVAQDGGDIT 136
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F+ GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 FHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 179
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F+ GV+
Sbjct: 116 IKELLDSRVRPAVAQDGGDITFHGFERGVV 145
>gi|89068101|ref|ZP_01155518.1| Nitrogen-fixing NifU [Oceanicola granulosus HTCC2516]
gi|89046340|gb|EAR52397.1| Nitrogen-fixing NifU [Oceanicola granulosus HTCC2516]
Length = 186
Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/152 (50%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + +AA SPL + +F ++GV VFFG DF+TVTK D+ +W +KP I IM+
Sbjct: 27 TADFASPEAANTSPLARRIFSVQGVTGVFFGTDFVTVTK-DEATEWDHVKPAILGAIMEH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
+ SG PV+ A+ ++ H +D E V IKELLDTR+RP V +DGGDI F F GVV
Sbjct: 86 YQSGAPVVEGAEGATGHAEHTGEDGEIVAQIKELLDTRVRPAVAQDGGDITFHGFDRGVV 145
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 146 YLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 177
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F GV+
Sbjct: 116 IKELLDTRVRPAVAQDGGDITFHGFDRGVV 145
>gi|254510570|ref|ZP_05122637.1| NifU domain protein [Rhodobacteraceae bacterium KLH11]
gi|221534281|gb|EEE37269.1| NifU domain protein [Rhodobacteraceae bacterium KLH11]
Length = 187
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 106/162 (65%), Gaps = 9/162 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ +AA SPL +F + GV VFFG+DF+TVTK DD + W +KP
Sbjct: 18 PGQTVLEAGTADFPSAEAAEKSPLATRIFGVAGVTGVFFGNDFVTVTKSDD-MQWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVL-TDAQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDI 145
I +M+ + SG PV+ TDA + H +D E V IK+LLD+R+RP V +DGGDI
Sbjct: 77 AILGAVMEHYQSGQPVMGTDADTGAGHAEHSGEDAEIVDQIKDLLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F G+V L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 TFHGFDRGIVYLHMQGACAGCPSSTITLKMGIENLLRHYIPE 178
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+LLD+R+RP V +DGGDI F F G++
Sbjct: 117 IKDLLDSRVRPAVAQDGGDITFHGFDRGIV 146
>gi|407772632|ref|ZP_11119934.1| HIRA-interacting protein 5 [Thalassospira profundimaris WP0211]
gi|407284585|gb|EKF10101.1| HIRA-interacting protein 5 [Thalassospira profundimaris WP0211]
Length = 189
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/153 (52%), Positives = 104/153 (67%), Gaps = 3/153 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F G A SPL + LF I+G+ VF G DFIT+TK DD DW+ LKP+I IM+
Sbjct: 28 TANFVKGDEAIKSPLARKLFEIDGIAGVFLGGDFITITK-DDSKDWQTLKPQILGGIMEH 86
Query: 97 FSSGLPVL-TDAQPSSDTV-IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
++SG PVL D+ ++ T E DDE V IKELLDTR+RP V +DGGDI F F+ GV
Sbjct: 87 YTSGQPVLDQDSNAATGTSSAAEGDDELVSQIKELLDTRVRPAVAQDGGDIVFHRFEDGV 146
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V L+M G+C CPSS TLK G++NML++Y+PE
Sbjct: 147 VFLEMHGACAGCPSSTATLKMGIENMLRYYVPE 179
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
IKELLDTR+RP V +DGGDI F F+DGV LE G P+ A
Sbjct: 118 IKELLDTRVRPAVAQDGGDIVFHRFEDGVVFLEMHGACAGCPSSTA 163
>gi|149202972|ref|ZP_01879943.1| nitrogen-fixing NifU-like protein [Roseovarius sp. TM1035]
gi|149143518|gb|EDM31554.1| nitrogen-fixing NifU-like protein [Roseovarius sp. TM1035]
Length = 187
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 107/164 (65%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ + + SPL + +FR+ GV VFFG+DF+TVTK + ++W +KP
Sbjct: 18 PGQTVLEAGTADFPSAEKSGSSPLAERIFRVPGVSGVFFGNDFVTVTK-GEAIEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPV-LTDAQPSSDTVIHEDDDET-VQMIKELLDTRIRPTVQEDGGDI 145
I IM+ + SG PV L ++ +S H +D V IKELLDTR+RP V +DGGDI
Sbjct: 77 AILGAIMEHYQSGQPVMLGESAVASGHAEHTGEDSAIVNQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTITLKMGIENLLRHYIPEVT 180
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F GV+
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFDRGVV 146
>gi|146423384|ref|XP_001487621.1| hypothetical protein PGUG_00997 [Meyerozyma guilliermondii ATCC
6260]
Length = 236
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 112/160 (70%), Gaps = 4/160 (2%)
Query: 29 GVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPE 88
+L+E +T++F +G+ A SPL LF ++G+KSV FG +FIT+ K + W ++KPE
Sbjct: 47 SILKE-NETLEFLSGREAARSPLAVKLFSVDGIKSVMFGSNFITIEKLANSNQWAVMKPE 105
Query: 89 IFATIMDFFSSGLPVLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
IF + + ++G PV+ D + S+D I+EDDDE V MIKEL+ TRIRP +QEDGGDI+F
Sbjct: 106 IFLILTEHLTTGAPVINDEYELSNDMEINEDDDEVVAMIKELIFTRIRPAIQEDGGDIEF 165
Query: 148 ISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYI 185
F G V LK++G+C SC SS VTLKNG+++ML+ YI
Sbjct: 166 AKFDEDSGTVYLKLKGACRSCESSSVTLKNGIESMLKHYI 205
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKEL+ TRIRP +QEDGGDI+F F +
Sbjct: 143 MIKELIFTRIRPAIQEDGGDIEFAKFDE 170
>gi|114326814|ref|YP_743971.1| Fe-S cluster assembly protein NFU [Granulibacter bethesdensis
CGDNIH1]
gi|114314988|gb|ABI61048.1| Fe-S cluster assembly protein NFU [Granulibacter bethesdensis
CGDNIH1]
Length = 186
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/157 (51%), Positives = 102/157 (64%), Gaps = 6/157 (3%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
PG T DF + A SPL LF + G+ VF G DF+TVTK D V+W LKP++ A +
Sbjct: 24 PGGTADFASAATAQRSPLALALFELPGIARVFLGADFVTVTKSSD-VEWPELKPQVLAAL 82
Query: 94 MDFFSSGLPVLTDAQPSSDTV---IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
MD F +G PVL D SD + I +D E V IKELLDTR+RP V DGGDI F +
Sbjct: 83 MDHFVTGRPVLNDT--PSDVLEEDIRPEDREIVDQIKELLDTRVRPAVAGDGGDIVFRGY 140
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ GVV L MQG+C+ CPSS TLK+G++NML+ Y+PE
Sbjct: 141 RDGVVLLHMQGACSGCPSSRATLKHGIENMLRHYVPE 177
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V DGGDI F ++DGV+
Sbjct: 116 IKELLDTRVRPAVAGDGGDIVFRGYRDGVV 145
>gi|126734863|ref|ZP_01750609.1| NifU-like domain protein [Roseobacter sp. CCS2]
gi|126715418|gb|EBA12283.1| NifU-like domain protein [Roseobacter sp. CCS2]
Length = 187
Score = 160 bits (404), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/162 (51%), Positives = 105/162 (64%), Gaps = 9/162 (5%)
Query: 34 PGQ------TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ T DFP+ +AA SPL K +F GV VFFG DF+TVTK DD V+W +KP
Sbjct: 18 PGQNVLEVGTADFPSAEAAENSPLAKRIFDAGGVTGVFFGIDFVTVTKADD-VEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLT-DAQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDI 145
I IM+ + SG V+ D +P S H +D E V IKELLDTR+RP V +DGGDI
Sbjct: 77 GILGAIMEHYQSGQSVMAEDHKPVSGHAEHTGEDGEIVGQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F+ G+V L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 TFHGFERGIVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 178
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F+ G++
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFERGIV 146
>gi|254461257|ref|ZP_05074673.1| NifU domain protein [Rhodobacterales bacterium HTCC2083]
gi|206677846|gb|EDZ42333.1| NifU domain protein [Rhodobacteraceae bacterium HTCC2083]
Length = 188
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/165 (49%), Positives = 105/165 (63%), Gaps = 10/165 (6%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ A SPL +F +EGV VFFG DF+TVTK D V+W +KP
Sbjct: 18 PGQTVLEMGTADFPSAVGADVSPLAARIFAVEGVTGVFFGTDFVTVTKADA-VEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTD--AQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGD 144
+ IM+ F SG V+ A P+S H +D E V IKELLD+R+RP V +DGGD
Sbjct: 77 ALLGAIMEHFQSGAAVMAGDMAPPNSGHAEHTGEDGEIVVQIKELLDSRVRPAVAQDGGD 136
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
I F F+ G+V L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 ITFHGFERGIVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 181
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F+ G++
Sbjct: 118 IKELLDSRVRPAVAQDGGDITFHGFERGIV 147
>gi|114769272|ref|ZP_01446898.1| nifU domain protein [Rhodobacterales bacterium HTCC2255]
gi|114550189|gb|EAU53070.1| nifU domain protein [Rhodobacterales bacterium HTCC2255]
Length = 186
Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 104/163 (63%), Gaps = 8/163 (4%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ QA SPL K +F ++G +VF G DF+T+TK +D DW +KP
Sbjct: 18 PGQTVMNMGTADFPSPQAGSSSPLAKRIFAVDGATAVFLGPDFVTITKTED-ADWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHE-DDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
+ IM+ F SG PV+ S H +D + V IK+LLDTR+RP V +DGGDI
Sbjct: 77 ALLGAIMEHFQSGQPVIEGEDNSGGHAEHTGEDSDIVNQIKDLLDTRVRPAVAQDGGDIT 136
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F+ G+V L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 FHGFERGIVYLHMQGACAGCPSSTITLKMGIENLLRHYIPEVT 179
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+LLDTR+RP V +DGGDI F F+ G++
Sbjct: 116 IKDLLDTRVRPAVAQDGGDITFHGFERGIV 145
>gi|429206970|ref|ZP_19198230.1| nitrogen-fixing NifU domain protein [Rhodobacter sp. AKP1]
gi|428189965|gb|EKX58517.1| nitrogen-fixing NifU domain protein [Rhodobacter sp. AKP1]
Length = 186
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/161 (50%), Positives = 102/161 (63%), Gaps = 8/161 (4%)
Query: 34 PGQ------TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ T DF T +AA SPL + +F GV +VFFG DF+ VTK D+ V W +KP
Sbjct: 18 PGQMVLEAGTADFATPEAAATSPLARRIFAAGGVSAVFFGTDFVAVTKADE-VAWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDE-TVQMIKELLDTRIRPTVQEDGGDIQ 146
I IM+ + G PVL Q +S H+ DE V+ IKELLDTR+RP V +DGGDI
Sbjct: 77 AILGAIMEHYQLGAPVLEGEQAASGHASHDGPDEDVVRQIKELLDTRVRPAVAQDGGDIT 136
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F G+V L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 FHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 177
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F G++
Sbjct: 116 IKELLDTRVRPAVAQDGGDITFHGFDRGIV 145
>gi|402820017|ref|ZP_10869584.1| hypothetical protein IMCC14465_08180 [alpha proteobacterium
IMCC14465]
gi|402510760|gb|EJW21022.1| hypothetical protein IMCC14465_08180 [alpha proteobacterium
IMCC14465]
Length = 193
Score = 159 bits (403), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 103/155 (66%), Gaps = 6/155 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP ++A SPL + LF++ V SVF G DFIT+TK +DD W+ LKP + +MDFF
Sbjct: 34 DFPNAESAKASPLAETLFKVPQVSSVFLGSDFITITKSEDD--WQQLKPLLLTALMDFFL 91
Query: 99 SGLPVLTDAQPSSDTVI----HEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
+GLPV+ ++D E D E V IK+LLDTR+RP V +DGGDI F ++ GV
Sbjct: 92 TGLPVINQTLSATDGAADDEGAEGDSEIVSTIKQLLDTRVRPAVAQDGGDIVFHGYEEGV 151
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
V L M+G+C CPSS TLK+G++N+L+ +IPE T
Sbjct: 152 VSLTMRGACAGCPSSTATLKHGIENLLKHFIPEIT 186
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+LLDTR+RP V +DGGDI F +++GV+
Sbjct: 123 IKQLLDTRVRPAVAQDGGDIVFHGYEEGVV 152
>gi|456351616|dbj|BAM86061.1| hypothetical protein S58_00400 [Agromonas oligotrophica S58]
Length = 189
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 111/171 (64%), Gaps = 9/171 (5%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + P T++F + AA SPL + LF ++GV VF+G DFITVTK D + W+
Sbjct: 14 LKFIPGRVVLPTGTMEFGSRDAAARSPLAERLFAVDGVTGVFYGADFITVTKSDGE--WQ 71
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDD-------ETVQMIKELLDTRIRP 136
LKP I IM+ + SG P+L D ++D EDD+ ETV MIK+L++TR+RP
Sbjct: 72 HLKPAILGAIMEHYMSGAPLLADGSAANDESADEDDEFYDEADTETVGMIKDLIETRVRP 131
Query: 137 TVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V DGGDI F F+ G+V L M+G+C+ CPSS TL++G+QN+L+ ++PE
Sbjct: 132 AVANDGGDITFRGFKEGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFVPE 182
Score = 44.3 bits (103), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L++TR+RP V DGGDI F F++G++
Sbjct: 120 MIKDLIETRVRPAVANDGGDITFRGFKEGIV 150
>gi|365896082|ref|ZP_09434170.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. STM
3843]
gi|365423162|emb|CCE06712.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. STM
3843]
Length = 189
Score = 159 bits (402), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 107/158 (67%), Gaps = 9/158 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F + +AA SPL LF IEG+ VF+G DFITVTK D DW+ LKP I IM+
Sbjct: 27 TMEFNSREAAARSPLAGRLFEIEGITGVFYGSDFITVTK--DGGDWQHLKPAILGAIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDD-------ETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
+ SG P+L D +SD + E+D+ ETV +IK+L++TR+RP V DGGDI F
Sbjct: 85 YMSGAPLLADGSAASDDLADEEDEFYNEADAETVDIIKDLIETRVRPAVANDGGDITFRG 144
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V L M+G+C+ CPSS TL++G+QN+L+ ++PE
Sbjct: 145 FKDGIVYLNMKGACSGCPSSTATLQHGIQNLLRHFVPE 182
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+L++TR+RP V DGGDI F F+DG++
Sbjct: 120 IIKDLIETRVRPAVANDGGDITFRGFKDGIV 150
>gi|149238520|ref|XP_001525136.1| HIRA-interacting protein 5 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450629|gb|EDK44885.1| HIRA-interacting protein 5 [Lodderomyces elongisporus NRRL YB-4239]
Length = 292
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 112/157 (71%), Gaps = 5/157 (3%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T +F +G+ A+ SPL LF I+G+KS+ FG +FIT+ K +W LLKPEIF+ +
Sbjct: 93 NETREFLSGREAHSSPLAVRLFSIDGIKSIMFGSNFITIEKLPQ-YEWALLKPEIFSILT 151
Query: 95 DFFSSGLPVLTDAQPS--SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ- 151
++ + GLP++ + + + D +EDDDE VQMIKEL+ TRIRP +Q+DGGDI+F+ F+
Sbjct: 152 EYLNQGLPIMNEEEGALADDVAFNEDDDEVVQMIKELIFTRIRPAIQDDGGDIEFVEFRE 211
Query: 152 -GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L+++G+C SC SS VTLKNG+++ML+ YI E
Sbjct: 212 SDGTVFLRLKGACRSCDSSSVTLKNGIESMLKHYIEE 248
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKEL+ TRIRP +Q+DGGDI+F+ F++
Sbjct: 184 MIKELIFTRIRPAIQDDGGDIEFVEFRES 212
>gi|374293447|ref|YP_005040482.1| putative iron-sulfur cluster scaffold, NifU-like [Azospirillum
lipoferum 4B]
gi|357425386|emb|CBS88273.1| putative iron-sulfur cluster scaffold, NifU-like [Azospirillum
lipoferum 4B]
Length = 190
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + + A SPL + LF IEG+ VF G DFIT+TK D DW LLKP I IM+
Sbjct: 32 TADFTSREDAARSPLAQRLFEIEGIVGVFLGADFITITKTDAR-DWFLLKPSILGVIMEH 90
Query: 97 FSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
F++ PVL D + DD+E V+ IKELLDTR+RP+V +DGGDI F F+ GVV
Sbjct: 91 FTADRPVLLDDGGDGHAAASNADDEEIVEQIKELLDTRVRPSVAQDGGDITFQGFEKGVV 150
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C+ CPSS TLK+G++NML+ YIPE
Sbjct: 151 YLAMKGACSGCPSSTATLKHGIENMLRHYIPE 182
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP+V +DGGDI F F+ GV+
Sbjct: 121 IKELLDTRVRPSVAQDGGDITFQGFEKGVV 150
>gi|159045379|ref|YP_001534173.1| hypothetical protein Dshi_2839 [Dinoroseobacter shibae DFL 12]
gi|157913139|gb|ABV94572.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 187
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 104/162 (64%), Gaps = 9/162 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ +AA SPL +F + GV +VFFG DF+TVTK D+ V+W +KP
Sbjct: 18 PGQTVLETGTADFPSAEAAGSSPLAGRIFAVNGVTAVFFGTDFVTVTK-DEGVEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
+ +M+ + SG V+T + P+ D E V IKELLDTR+RP V +DGGDI
Sbjct: 77 AVLGAVMEHYQSGDAVMTGEASAPAGHAAHDGPDSEIVGQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F G+V L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 TFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 178
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F G++
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFDRGIV 146
>gi|242802638|ref|XP_002484011.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
gi|218717356|gb|EED16777.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
Length = 290
Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 108/156 (69%), Gaps = 13/156 (8%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL L +EGV SVF+G DFITVTKQ D V+W +KPE+F+ I + +SG P++
Sbjct: 125 HPSPLAAKLLNVEGVSSVFYGPDFITVTKQSD-VNWAHIKPEVFSLITEVVTSGEPIVNT 183
Query: 107 AQPSS-----------DTV-IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
+ +S DT+ +E+DDE V MIKELL+TRIRP +QEDGGDI+F F+ G+
Sbjct: 184 VERTSGAQDAQEGGGEDTLSYNEEDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGI 243
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTP 190
V LK++G+C +C SS VTLKNG+++ML Y+ TTP
Sbjct: 244 VLLKLRGACRTCDSSTVTLKNGIESMLMHYVSYTTP 279
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F++G++
Sbjct: 214 MIKELLETRIRPAIQEDGGDIEFRGFENGIV 244
>gi|365882787|ref|ZP_09421976.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. ORS
375]
gi|365288820|emb|CCD94507.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. ORS
375]
Length = 189
Score = 159 bits (401), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 111/171 (64%), Gaps = 9/171 (5%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + P T++F + AA SPL + LF ++GV VF+G DFITVTK D + W+
Sbjct: 14 LKFIPGRVVLPTGTMEFSSRDAAGRSPLAERLFAVDGVTGVFYGADFITVTKSDGE--WQ 71
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDD-------ETVQMIKELLDTRIRP 136
LKP I IM+ + SG P+L D ++D EDD+ ETV MIK+L+++R+RP
Sbjct: 72 HLKPAILGAIMEHYMSGAPLLADGSAANDASADEDDEFYDEADTETVGMIKDLIESRVRP 131
Query: 137 TVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V DGGDI F F+ G+V L M+G+C+ CPSS TL++G+QN+L+ ++PE
Sbjct: 132 AVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFVPE 182
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L+++R+RP V DGGDI F F+DG++
Sbjct: 120 MIKDLIESRVRPAVANDGGDITFRGFKDGIV 150
>gi|328350796|emb|CCA37196.1| NifU-like protein 5, mitochondrial [Komagataella pastoris CBS 7435]
Length = 210
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 110/157 (70%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
TI+F G+ A+ SPL LF I+GVK++ GHDFITV K+ D DW LLKPEIFA + +
Sbjct: 9 TIEFLNGRQAFKSPLALKLFGIDGVKTIMIGHDFITVEKKTQD-DWSLLKPEIFAVLTES 67
Query: 97 FSSGLPVLTDAQPSS---DTVIHEDD-DETVQMIKELLDTRIRPTVQEDGGDIQFISF-- 150
++G PVL + S ++ EDD DE V M+KEL+ TRIRP +Q+DGGDI+F+ F
Sbjct: 68 LNNGTPVLNEQHQSDANDQALLEEDDEDEVVSMVKELIFTRIRPAIQDDGGDIEFVRFEY 127
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L+++G+C SC SS +TLKNG+++ML+ YI E
Sbjct: 128 ETGTVYLRLRGACRSCSSSSITLKNGIESMLKHYIEE 164
Score = 44.3 bits (103), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 24/27 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQ 27
M+KEL+ TRIRP +Q+DGGDI+F+ F+
Sbjct: 100 MVKELIFTRIRPAIQDDGGDIEFVRFE 126
>gi|254566581|ref|XP_002490401.1| Protein involved in iron metabolism in mitochondria [Komagataella
pastoris GS115]
gi|238030197|emb|CAY68120.1| Protein involved in iron metabolism in mitochondria [Komagataella
pastoris GS115]
Length = 249
Score = 158 bits (400), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 110/157 (70%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
TI+F G+ A+ SPL LF I+GVK++ GHDFITV K+ D DW LLKPEIFA + +
Sbjct: 48 TIEFLNGRQAFKSPLALKLFGIDGVKTIMIGHDFITVEKKTQD-DWSLLKPEIFAVLTES 106
Query: 97 FSSGLPVLTDAQPSS---DTVIHEDD-DETVQMIKELLDTRIRPTVQEDGGDIQFISF-- 150
++G PVL + S ++ EDD DE V M+KEL+ TRIRP +Q+DGGDI+F+ F
Sbjct: 107 LNNGTPVLNEQHQSDANDQALLEEDDEDEVVSMVKELIFTRIRPAIQDDGGDIEFVRFEY 166
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L+++G+C SC SS +TLKNG+++ML+ YI E
Sbjct: 167 ETGTVYLRLRGACRSCSSSSITLKNGIESMLKHYIEE 203
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 24/27 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQ 27
M+KEL+ TRIRP +Q+DGGDI+F+ F+
Sbjct: 139 MVKELIFTRIRPAIQDDGGDIEFVRFE 165
>gi|329114732|ref|ZP_08243489.1| Scaffold Protein Nfu/NifU [Acetobacter pomorum DM001]
gi|326695863|gb|EGE47547.1| Scaffold Protein Nfu/NifU [Acetobacter pomorum DM001]
Length = 186
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 108/162 (66%), Gaps = 9/162 (5%)
Query: 34 PGQ-------TIDFPTGQA-AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLL 85
PGQ TIDF A A SPL + LF + GV VF G+DF++VTK D + DW+ L
Sbjct: 18 PGQAVMGDAGTIDFIDADAVAGRSPLAEALFALPGVSRVFLGNDFVSVTKADSE-DWEEL 76
Query: 86 KPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
+P+I +T+MD F +G PV+ + ++ +D+E V IKELLDTR+RP V DGGDI
Sbjct: 77 RPQILSTLMDHFVAGHPVVAEGVAVTEDATAPEDEEIVTQIKELLDTRVRPAVAGDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F ++ G+V+L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 137 VFRGYRNGIVRLTMQGACSGCPSSRATLKHGVENMLRHYVPE 178
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELLDTR+RP V DGGDI F +++G++
Sbjct: 117 IKELLDTRVRPAVAGDGGDIVFRGYRNGIVR 147
>gi|422295504|gb|EKU22803.1| iron-sulfur cluster scaffold protein nfu-like protein
[Nannochloropsis gaditana CCMP526]
Length = 277
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/141 (54%), Positives = 100/141 (70%), Gaps = 3/141 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL K L +IEGV VF G FIT+TK + W+ L PEIFAT+MD ++ G +++D
Sbjct: 121 SPLAKKLLKIEGVMGVFLGRTFITITK-SPGIIWQNLNPEIFATVMDHYAEGGVIVSDHA 179
Query: 109 PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSC 166
SDT I + DDE V M+KEL+++RIRP VQEDGGDI + F + G+V +++ GSC+ C
Sbjct: 180 IVSDTTILDTDDEVVAMVKELMESRIRPAVQEDGGDIFYEGFDPESGLVSVRLAGSCSGC 239
Query: 167 PSSVVTLKNGVQNMLQFYIPE 187
PSS VTLKNGV+NML YIPE
Sbjct: 240 PSSAVTLKNGVENMLMHYIPE 260
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
M+KEL+++RIRP VQEDGGDI + F
Sbjct: 196 MVKELMESRIRPAVQEDGGDIFYEGF 221
>gi|89053356|ref|YP_508807.1| nitrogen-fixing NifU-like protein [Jannaschia sp. CCS1]
gi|88862905|gb|ABD53782.1| nitrogen-fixing NifU-like protein [Jannaschia sp. CCS1]
Length = 187
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 103/162 (63%), Gaps = 9/162 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ++ DFPT + + SPL +F +EGV VFFG DF+TVTK D VDW +KP
Sbjct: 18 PGQSVLEVGTADFPTAETSEKSPLASRIFAVEGVTGVFFGIDFVTVTKADA-VDWDHVKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQP-SSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDI 145
I IM+ + SG PV+ D SS H +D E V IK LLDTR+RP V +DGGDI
Sbjct: 77 AILGAIMEHYQSGDPVMGDGHEVSSGHAEHTGEDGEIVGQIKSLLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 178
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK LLDTR+RP V +DGGDI F F GV+
Sbjct: 117 IKSLLDTRVRPAVAQDGGDITFHGFDRGVV 146
>gi|119383283|ref|YP_914339.1| NifU domain-containing protein [Paracoccus denitrificans PD1222]
gi|119373050|gb|ABL68643.1| nitrogen-fixing NifU domain protein [Paracoccus denitrificans
PD1222]
Length = 184
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 98/162 (60%), Gaps = 7/162 (4%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PG+T+ DFP A SPL + +F + GV VF G DF+TVTK +D V W LKP
Sbjct: 18 PGETVLGSGTADFPAPDTAAASPLARRIFAVPGVTGVFLGSDFVTVTKAEDAV-WDHLKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ IM+ + SG P + A S D E V IKELLDTR+RP V +DGGDI F
Sbjct: 77 SVLGAIMEHYQSGAPAIEGATASGHNDQDGPDAEIVNQIKELLDTRVRPAVAQDGGDITF 136
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 HGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 178
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F GV+
Sbjct: 115 IKELLDTRVRPAVAQDGGDITFHGFDRGVV 144
>gi|86138949|ref|ZP_01057520.1| nifU domain protein [Roseobacter sp. MED193]
gi|85824180|gb|EAQ44384.1| nifU domain protein [Roseobacter sp. MED193]
Length = 187
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/164 (48%), Positives = 105/164 (64%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ + A SPL +F + GV VFFG+DF+TVTK D V+W +KP
Sbjct: 18 PGQTVLDAGTADFPSAETAGSSPLATRIFAVSGVAGVFFGNDFVTVTKSDS-VEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVL-TDAQPSSDTVIHE-DDDETVQMIKELLDTRIRPTVQEDGGDI 145
I IM+ + SG P++ + SS H ++ E V IK+LLD+R+RP V +DGGDI
Sbjct: 77 AILGAIMEHYQSGQPIVNAGGEQSSGHAEHSGENSEIVDQIKDLLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 137 TFHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 180
Score = 42.7 bits (99), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+LLD+R+RP V +DGGDI F F GV+
Sbjct: 117 IKDLLDSRVRPAVAQDGGDITFHGFDRGVV 146
>gi|162312172|ref|NP_595452.2| NifU-like protein (predicted) [Schizosaccharomyces pombe 972h-]
gi|46397296|sp|Q9UUB8.1|YH9J_SCHPO RecName: Full=NifU-like protein C1709.19c
gi|157310401|emb|CAA21258.2| NifU-like protein (predicted) [Schizosaccharomyces pombe]
Length = 260
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 109/155 (70%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ +F GQ SPL + LF I+GV S+FFG DFITV+K +W +KPE+F+ IM+
Sbjct: 71 SCEFMRGQGTVNSPLAQKLFDIDGVDSIFFGKDFITVSK-GAGTEWAQMKPEVFSVIMEH 129
Query: 97 FSSGLPVLTDA--QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
S+G PVL++ + +SDT I E D + V MIKEL++T IRP++QEDGGD++F F +
Sbjct: 130 LSNGSPVLSEEPLKGASDTQILESDSQIVAMIKELIETSIRPSIQEDGGDVEFRGFDEKT 189
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V LK++G+C +C SS VTLKNG+Q ML+ YIPE
Sbjct: 190 GTVSLKLRGACRTCSSSAVTLKNGIQQMLKHYIPE 224
Score = 43.1 bits (100), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKEL++T IRP++QEDGGD++F F +
Sbjct: 160 MIKELIETSIRPSIQEDGGDVEFRGFDE 187
>gi|299133388|ref|ZP_07026583.1| Scaffold protein Nfu/NifU [Afipia sp. 1NLS2]
gi|298593525|gb|EFI53725.1| Scaffold protein Nfu/NifU [Afipia sp. 1NLS2]
Length = 187
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 106/156 (67%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F + +A SPL LF I GV VF+G DF+TVTK DD DW+ LKP I TIM+
Sbjct: 27 TMEFTSRDSAARSPLAVKLFEIPGVTGVFYGSDFVTVTK--DDGDWQHLKPAILGTIMEH 84
Query: 97 FSSGLPVLTD-----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
+ SG P+L D A P ++ +E D ETV +IK++L+TR+RP V DGGDI F F+
Sbjct: 85 YMSGGPILADGAQPDAGPHAEEFFNEADAETVGIIKDILETRVRPAVASDGGDITFRGFK 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V L M+GSC+ CPSS TLK+G+QN+L+ Y+P+
Sbjct: 145 DGIVFLDMKGSCSGCPSSTATLKHGIQNLLKHYVPD 180
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK++L+TR+RP V DGGDI F F+DG++
Sbjct: 118 IIKDILETRVRPAVASDGGDITFRGFKDGIV 148
>gi|83594860|ref|YP_428612.1| nitrogen-fixing NifU-like [Rhodospirillum rubrum ATCC 11170]
gi|386351625|ref|YP_006049873.1| nitrogen-fixing NifU-like protein [Rhodospirillum rubrum F11]
gi|83577774|gb|ABC24325.1| Nitrogen-fixing NifU-like [Rhodospirillum rubrum ATCC 11170]
gi|346720061|gb|AEO50076.1| nitrogen-fixing NifU-like protein [Rhodospirillum rubrum F11]
Length = 183
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 110/164 (67%), Gaps = 2/164 (1%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G PG DF AA SPL + LF I+GV ++ G DFITV+K + + DW+
Sbjct: 14 LKFLPGKAVLPGGGRDFADVGAAGPSPLARRLFAIDGVTGIYLGADFITVSKAEAE-DWQ 72
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGG 143
++KP + IM+ F+SG PVL A ++++ +DDE V+ I++LL+TR+RP V +DGG
Sbjct: 73 VIKPLVLGAIMEHFTSGEPVLI-AGTAAESAGSAEDDEVVRQIRDLLETRVRPAVAQDGG 131
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI F FQ GVV L ++GSC+ CPSS TLK+G++NML+ YIPE
Sbjct: 132 DIVFDRFQDGVVYLHLRGSCSGCPSSTATLKHGIENMLRHYIPE 175
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I++LL+TR+RP V +DGGDI F FQDGV+
Sbjct: 114 IRDLLETRVRPAVAQDGGDIVFDRFQDGVV 143
>gi|449016920|dbj|BAM80322.1| probable iron-sulfur cluster scaffold protein [Cyanidioschyzon
merolae strain 10D]
Length = 305
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/168 (54%), Positives = 116/168 (69%), Gaps = 12/168 (7%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
V+E G T DFPT QAA SPL LF+I+GV V FG DFITVTK+ +D++W +L+PEI
Sbjct: 99 VIENEG-TYDFPTPQAARASPLADKLFQIDGVVGVMFGPDFITVTKR-EDIEWNVLRPEI 156
Query: 90 FATIMDFFSSGLPVLTDAQPSS--------DTVIHEDDDETVQMIKELLDTRIRPTVQED 141
F+ IMDF+ SG P+ DA S DT I + D E V MIKEL++TRIRP V ED
Sbjct: 157 FSVIMDFYMSGQPLFMDASTGSADAPGLNEDTRILDADPEHVAMIKELIETRIRPAVAED 216
Query: 142 GGDIQFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GG + + F+ G V L++QG+C+SC SS VTLKNGV+NML+ Y+PE
Sbjct: 217 GGSVLYRGFEEATGTVLLELQGACSSCASSSVTLKNGVENMLRHYVPE 264
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKEL++TRIRP V EDGG + + F++
Sbjct: 200 MIKELIETRIRPAVAEDGGSVLYRGFEEA 228
>gi|258541120|ref|YP_003186553.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01]
gi|384041041|ref|YP_005479785.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-12]
gi|384049556|ref|YP_005476619.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-03]
gi|384052666|ref|YP_005485760.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-07]
gi|384055898|ref|YP_005488565.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-22]
gi|384058539|ref|YP_005497667.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-26]
gi|384061833|ref|YP_005482475.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-32]
gi|384117909|ref|YP_005500533.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|421848932|ref|ZP_16281917.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus NBRC 101655]
gi|256632198|dbj|BAH98173.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01]
gi|256635255|dbj|BAI01224.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-03]
gi|256638310|dbj|BAI04272.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-07]
gi|256641364|dbj|BAI07319.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-22]
gi|256644419|dbj|BAI10367.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-26]
gi|256647474|dbj|BAI13415.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-32]
gi|256650527|dbj|BAI16461.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256653518|dbj|BAI19445.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus IFO 3283-12]
gi|371460201|dbj|GAB27120.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus NBRC 101655]
Length = 186
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 108/162 (66%), Gaps = 9/162 (5%)
Query: 34 PGQ-------TIDFPTGQA-AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLL 85
PGQ TIDF A A S L + LF + GV VF G+DF++VTK D + DW+ L
Sbjct: 18 PGQAVMGDAGTIDFIDADAVAGRSSLAEALFALPGVSRVFLGNDFVSVTKADSE-DWEEL 76
Query: 86 KPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
+P+I +T+MD F +G PV+ + ++ I +D+E V IKELLDTR+RP V DGGDI
Sbjct: 77 RPQILSTLMDHFVAGHPVVAEGVAVTEDAIAPEDEEIVTQIKELLDTRVRPAVAGDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F ++ G+V+L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 137 VFRGYRNGIVRLTMQGACSGCPSSRATLKHGVENMLRHYVPE 178
Score = 43.9 bits (102), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELLDTR+RP V DGGDI F +++G++
Sbjct: 117 IKELLDTRVRPAVAGDGGDIVFRGYRNGIVR 147
>gi|367478318|ref|ZP_09477630.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. ORS
285]
gi|365269371|emb|CCD90098.1| putative nifU protein (C-terminal fragment) [Bradyrhizobium sp. ORS
285]
Length = 189
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 106/158 (67%), Gaps = 9/158 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F + AA SPL + LF ++GV VF+G DFITVTK D + W+ LKP I IM+
Sbjct: 27 TMEFASRDAAARSPLAERLFAVDGVTGVFYGADFITVTKSDGE--WQHLKPAILGAIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDD-------ETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
+ SG P+L D ++D EDD+ ETV MIK+L+++R+RP V DGGDI F
Sbjct: 85 YMSGAPLLADGSAANDESADEDDEFYDEADTETVGMIKDLIESRVRPAVANDGGDITFRG 144
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V L M+G+C+ CPSS TL++G+QN+L+ ++PE
Sbjct: 145 FKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFVPE 182
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L+++R+RP V DGGDI F F+DG++
Sbjct: 120 MIKDLIESRVRPAVANDGGDITFRGFKDGIV 150
>gi|337264730|ref|YP_004608785.1| Scaffold protein Nfu/NifU [Mesorhizobium opportunistum WSM2075]
gi|336025040|gb|AEH84691.1| Scaffold protein Nfu/NifU [Mesorhizobium opportunistum WSM2075]
Length = 189
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 98/148 (66%), Gaps = 7/148 (4%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
AA SPL LF I GV VFFG+DFITVTK D DW+ LKP I IM+ F SG PV+
Sbjct: 36 AAVASPLAGRLFEIPGVTGVFFGYDFITVTK--DGPDWQHLKPAILGAIMEHFMSGAPVM 93
Query: 105 TDAQPSSDT-----VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
A P+++T + D+E V IKELLDTR+RP V +DGGDI F F+ G V L M
Sbjct: 94 AKAGPAAETSQTGEFYDKADEELVITIKELLDTRVRPAVAQDGGDITFRGFENGTVFLHM 153
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+G+C CPSS TLK+G+QN+L+ ++PE
Sbjct: 154 KGACAGCPSSTATLKHGIQNLLRHFVPE 181
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F++G +
Sbjct: 120 IKELLDTRVRPAVAQDGGDITFRGFENGTV 149
>gi|154254042|ref|YP_001414866.1| scaffold protein Nfu/NifU [Parvibaculum lavamentivorans DS-1]
gi|154157992|gb|ABS65209.1| Scaffold protein Nfu/NifU [Parvibaculum lavamentivorans DS-1]
Length = 201
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 98/156 (62%), Gaps = 5/156 (3%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G+ DFPT +AA SPL LF +E V VFFG DFITVTK + W+ LKP + IM
Sbjct: 41 GRAADFPTAEAAARSPLAMRLFAVENVTGVFFGSDFITVTKSGGE--WQHLKPALLGAIM 98
Query: 95 DFFSSGLPVL---TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
+ F+ G P+L + +D E V IKE+LDTR+RP V +DGGDI F ++
Sbjct: 99 EHFTGGAPILFSAAPDDDDAHAAHEGEDGEIVTQIKEILDTRVRPAVAQDGGDITFQGYE 158
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVV L MQG+C CPSS VTLK GV+NML+ YIPE
Sbjct: 159 EGVVFLNMQGACAGCPSSTVTLKRGVENMLKHYIPE 194
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKE+LDTR+RP V +DGGDI F +++GV+
Sbjct: 133 IKEILDTRVRPAVAQDGGDITFQGYEEGVV 162
>gi|421852746|ref|ZP_16285431.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
gi|371479077|dbj|GAB30634.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
pasteurianus subsp. pasteurianus LMG 1262 = NBRC 106471]
Length = 186
Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 108/162 (66%), Gaps = 9/162 (5%)
Query: 34 PGQT-------IDFPTGQA-AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLL 85
PGQT IDF A A S L + LF + GV VF G+DF++VTK D + DW+ L
Sbjct: 18 PGQTVMGDAGTIDFIDADAVAGRSSLAEALFALPGVSRVFLGNDFVSVTKADSE-DWEEL 76
Query: 86 KPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
+P+I +T+MD F +G PV+ + ++ I +D+E V IKELLDTR+RP V DGGDI
Sbjct: 77 RPQILSTLMDHFVAGHPVVAEGVAVTEDAIAPEDEEIVTQIKELLDTRVRPAVAGDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F ++ G+V+L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 137 VFRGYRNGIVRLTMQGACSGCPSSRATLKHGVENMLRHYVPE 178
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELLDTR+RP V DGGDI F +++G++
Sbjct: 117 IKELLDTRVRPAVAGDGGDIVFRGYRNGIVR 147
>gi|307942729|ref|ZP_07658074.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Roseibium
sp. TrichSKD4]
gi|307773525|gb|EFO32741.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Roseibium
sp. TrichSKD4]
Length = 186
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 106/155 (68%), Gaps = 6/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + A SPL + LF++ GV ++FFG+DFITVTK++D DW+ +KP I IM+
Sbjct: 27 TYDFTSPTEAGASPLAEKLFQVPGVAAIFFGYDFITVTKKED-TDWQHMKPAILGAIMEQ 85
Query: 97 FSSGLPVLTDAQPSSDT----VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
F SG PV+ Q + DT E D ETV +IK+LLDTR+RP V +DGGDI F F+
Sbjct: 86 FMSGQPVMASGQ-AEDTEEGEFFEEADQETVTVIKDLLDTRVRPAVAQDGGDITFKGFKE 144
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V L M+G+C CPSS TL++G+QN+L+ ++PE
Sbjct: 145 GIVYLSMRGACAGCPSSTATLQHGIQNLLKHFVPE 179
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+LLDTR+RP V +DGGDI F F++G++
Sbjct: 117 VIKDLLDTRVRPAVAQDGGDITFKGFKEGIV 147
>gi|319779939|ref|YP_004139415.1| Scaffold protein Nfu/NifU [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317165827|gb|ADV09365.1| Scaffold protein Nfu/NifU [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 189
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 98/148 (66%), Gaps = 7/148 (4%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
AA SPL LF I GV VFFG+DFITVTK D DW+ LKP I IM+ F SG PV+
Sbjct: 36 AAVASPLAGRLFEIPGVTGVFFGYDFITVTK--DGPDWQHLKPAILGAIMEHFMSGAPVM 93
Query: 105 TDAQPSSDT-----VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
A P+++T + D+E V IKELLDTR+RP V +DGGDI F F+ G V L M
Sbjct: 94 AKAGPAAETSQTGEFYDKADEELVITIKELLDTRVRPAVAQDGGDITFRGFENGTVFLHM 153
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+G+C CPSS TLK+G+QN+L+ ++PE
Sbjct: 154 KGACAGCPSSTATLKHGIQNLLRHFVPE 181
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F++G +
Sbjct: 120 IKELLDTRVRPAVAQDGGDITFRGFENGTV 149
>gi|402850727|ref|ZP_10898916.1| NifU-like domain protein [Rhodovulum sp. PH10]
gi|402498988|gb|EJW10711.1| NifU-like domain protein [Rhodovulum sp. PH10]
Length = 184
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 108/166 (65%), Gaps = 4/166 (2%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G P T+D+ + A SPL + LF + GV VFFG DFIT+TK D DW+
Sbjct: 14 LKFLPGRTVLPYGTLDYRSKDDAAASPLAQRLFDVPGVVGVFFGADFITITKTD--TDWQ 71
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDT--VIHEDDDETVQMIKELLDTRIRPTVQED 141
+KP + IM+ F + PV+ +A P+S+T E D ETV++IK+L+D R+RP V D
Sbjct: 72 HIKPAVLGVIMEHFMADAPVVMEAHPASETDEFFDEKDAETVELIKDLIDNRVRPAVAND 131
Query: 142 GGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GGDI F F+ GVV L M+G+C+ CPSS TL++G+QN+L+ ++PE
Sbjct: 132 GGDITFKGFKDGVVYLTMKGACSGCPSSTATLRHGIQNLLRHFVPE 177
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+L+D R+RP V DGGDI F F+DGV+
Sbjct: 115 LIKDLIDNRVRPAVANDGGDITFKGFKDGVV 145
>gi|390449528|ref|ZP_10235133.1| nitrogen-fixing NifU-like protein [Nitratireductor aquibiodomus
RA22]
gi|389664025|gb|EIM75536.1| nitrogen-fixing NifU-like protein [Nitratireductor aquibiodomus
RA22]
Length = 191
Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 106/165 (64%), Gaps = 10/165 (6%)
Query: 30 VLEEPGQTIDFPTGQ-AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPE 88
VLEE T DF + AA SPL + LF + GV VFFG+DFITVTK+D DW+ LKP
Sbjct: 22 VLEE--GTADFREAESAAETSPLAERLFSVSGVTGVFFGYDFITVTKEDGP-DWQHLKPA 78
Query: 89 IFATIMDFFSSGLPVLTDAQ----PSSDT--VIHEDDDETVQMIKELLDTRIRPTVQEDG 142
I TIM+ F SG PV+ A P SD E D+E V IKELLDTR+RP V +DG
Sbjct: 79 ILGTIMEHFMSGQPVMAKAGLGGLPVSDEGEFYDEADEEIVSTIKELLDTRVRPAVAQDG 138
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GDI F ++ G V L M+G+C CPSS TLK+G+QN+L ++PE
Sbjct: 139 GDITFRGYEKGTVFLHMKGACAGCPSSTATLKHGIQNLLHHFVPE 183
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLLFR 57
IKELLDTR+RP V +DGGDI F ++ G L G P+ A + LL
Sbjct: 122 IKELLDTRVRPAVAQDGGDITFRGYEKGTVFLHMKGACAGCPSSTATLKHGIQNLLHH 179
>gi|294678745|ref|YP_003579360.1| NifU domain-containing protein [Rhodobacter capsulatus SB 1003]
gi|294477565|gb|ADE86953.1| NifU domain protein [Rhodobacter capsulatus SB 1003]
Length = 188
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/169 (46%), Positives = 101/169 (59%), Gaps = 4/169 (2%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G+ P DF + +AA SPL +FR+ GVK+VF G DF+TVTK D+ +W
Sbjct: 14 LKFLPGLDVMPEGVADFTSVEAAQVSPLAGRIFRVAGVKAVFLGADFVTVTK-DEATEWA 72
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHED---DDETVQMIKELLDTRIRPTVQE 140
+P I IM+ + SG PVL A T D D + IKELLDTR+RP V
Sbjct: 73 HARPAIMGAIMEHYQSGQPVLMGAAAGGHTTGGADTGEDGAIISQIKELLDTRVRPAVAR 132
Query: 141 DGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
DGGDI F F+ GVV L MQG+C CPSS TLK G++N+L+ YIPE +
Sbjct: 133 DGGDITFHGFEKGVVYLHMQGACAGCPSSTYTLKMGIENLLRHYIPEVS 181
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V DGGDI F F+ GV+
Sbjct: 118 IKELLDTRVRPAVARDGGDITFHGFEKGVV 147
>gi|407781036|ref|ZP_11128256.1| NifU-like protein domain protein [Oceanibaculum indicum P24]
gi|407208462|gb|EKE78380.1| NifU-like protein domain protein [Oceanibaculum indicum P24]
Length = 183
Score = 156 bits (395), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/160 (50%), Positives = 104/160 (65%), Gaps = 4/160 (2%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
V+EE T DF +AA SPL K LF ++GV VFFG DF++V K+DD +W +LKP +
Sbjct: 22 VMEE--GTADFADAEAAKRSPLAKRLFAVDGVTGVFFGADFVSVAKRDDK-EWYVLKPAV 78
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
IM+ F++G P+L + ED E VQ IKELLDTR+RP V +DGGDI F
Sbjct: 79 LGAIMEHFTAGDPLLLADDSADAAPAGEDS-EIVQTIKELLDTRVRPAVAQDGGDIVFKG 137
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F+ GVV L MQG+C CPSS TLK G++N+L+ YIPE
Sbjct: 138 FEDGVVYLHMQGACAGCPSSTATLKMGIENLLKHYIPEVA 177
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F+DGV+
Sbjct: 114 IKELLDTRVRPAVAQDGGDIVFKGFEDGVV 143
>gi|384919122|ref|ZP_10019183.1| nitrogen-fixing NifU-like protein [Citreicella sp. 357]
gi|384467060|gb|EIE51544.1| nitrogen-fixing NifU-like protein [Citreicella sp. 357]
Length = 186
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 100/163 (61%), Gaps = 8/163 (4%)
Query: 34 PGQ------TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ T DFP+ A SPL + LF + GV VF G +F+TVTK D+ DW +KP
Sbjct: 18 PGQAVLGAGTADFPSADGAEASPLARRLFDVTGVTGVFLGSEFVTVTK-DEAADWDHVKP 76
Query: 88 EIFATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
+ IM+ F SG PV+ + S +D E V IKELLDTR+RP V +DGGDI
Sbjct: 77 AVLGAIMEHFQSGDPVMAGEGGASGHAAFDGEDAEIVSQIKELLDTRVRPGVAQDGGDIT 136
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F GVV L MQG+C CPSS +TLK G++N+L+ YIPE +
Sbjct: 137 FHGFDRGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVS 179
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F GV+
Sbjct: 116 IKELLDTRVRPGVAQDGGDITFHGFDRGVV 145
>gi|222147346|ref|YP_002548303.1| hypothetical protein Avi_0430 [Agrobacterium vitis S4]
gi|221734336|gb|ACM35299.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 186
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 102/155 (65%), Gaps = 6/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F +AA SPL + LF I GV SVFFG+DF+TVTK D +W LKP I +IM+
Sbjct: 27 TAEFRDREAAMASPLAEKLFAIPGVTSVFFGYDFVTVTK--DTAEWPHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDA----QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
F SG P++ A + S + +E D+ V IKELL+TR+RP V +DGGDI F F+
Sbjct: 85 FMSGAPIMGSAVAGDEASDEEFFNEGDETIVATIKELLETRVRPAVAQDGGDITFRGFRD 144
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L M+GSC CPSS TLK+GVQN+L+ +IPE
Sbjct: 145 GKVFLNMKGSCAGCPSSTATLKHGVQNLLRHFIPE 179
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELL+TR+RP V +DGGDI F F+DG
Sbjct: 118 IKELLETRVRPAVAQDGGDITFRGFRDG 145
>gi|357030245|ref|ZP_09092206.1| Scaffold protein Nfu/NifU [Mesorhizobium amorphae CCNWGS0123]
gi|355532913|gb|EHH02260.1| Scaffold protein Nfu/NifU [Mesorhizobium amorphae CCNWGS0123]
Length = 189
Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 98/148 (66%), Gaps = 7/148 (4%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
AA SPL LF I GV VFFG+DFITVTK D DW+ LKP I IM+ F SG PV+
Sbjct: 36 AAGASPLAGRLFEIPGVTGVFFGYDFITVTK--DGPDWQHLKPAILGAIMEHFMSGAPVM 93
Query: 105 TDAQPSSDT-----VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
A P+++T + D+E V IKELLDTR+RP V +DGGDI F F+ G V L M
Sbjct: 94 ARAGPAAETSQTGEFYDKADEELVITIKELLDTRVRPAVAQDGGDITFRGFENGTVFLHM 153
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+G+C CPSS TLK+G+QN+L+ ++PE
Sbjct: 154 KGACAGCPSSTATLKHGIQNLLRHFVPE 181
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F++G +
Sbjct: 120 IKELLDTRVRPAVAQDGGDITFRGFENGTV 149
>gi|344923779|ref|ZP_08777240.1| thioredoxin [Candidatus Odyssella thessalonicensis L13]
Length = 183
Score = 156 bits (394), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/163 (47%), Positives = 111/163 (68%), Gaps = 14/163 (8%)
Query: 34 PGQTIDFPTGQAAYC-------SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
PG+T+ G A++ SP + L ++GV++VFFG DFIT+TK DW +LK
Sbjct: 18 PGRTV-LEAGTASFTTLDECNRSPFARRLLSVDGVEAVFFGSDFITITKASAQ-DWYILK 75
Query: 87 PEIFATIMDFFSSGLPVLTDAQPSSDTVIHED--DDETVQMIKELLDTRIRPTVQEDGGD 144
P + IM+ F +GLPVL D +S+T+ ++ D +Q IKEL+DTR+RP V +DGGD
Sbjct: 76 PSVIGIIMEQFVAGLPVLID---TSETLSAQNAETDPIIQQIKELIDTRVRPAVAQDGGD 132
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
I F +F+ G+V LKMQG+C+ CPSS TLK+G++NML++YIPE
Sbjct: 133 ILFHAFENGIVYLKMQGACSGCPSSTATLKSGIENMLRYYIPE 175
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
IKEL+DTR+RP V +DGGDI F +F++G+ L+ G P+ A S + +L
Sbjct: 114 IKELIDTRVRPAVAQDGGDILFHAFENGIVYLKMQGACSGCPSSTATLKSGIENML 169
>gi|407787731|ref|ZP_11134870.1| hypothetical protein B30_16838 [Celeribacter baekdonensis B30]
gi|407199010|gb|EKE69034.1| hypothetical protein B30_16838 [Celeribacter baekdonensis B30]
Length = 187
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 102/162 (62%), Gaps = 9/162 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFPT +A SPL + +F + V VF G DF+TVTK+D DW +KP
Sbjct: 18 PGQTVLEAGTADFPTADSAAASPLAQRVFAVGNVTGVFLGSDFVTVTKEDA-TDWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVL-TDAQPSSDTVIHED-DDETVQMIKELLDTRIRPTVQEDGGDI 145
I IM+ F SG V+ T A + H+ D E V+ IKELLDTR+RP V +DGGDI
Sbjct: 77 AILGAIMEHFQSGAQVMDTHASAAGGHAEHDGPDSEIVKQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F G+V L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 TFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 178
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F G++
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFDRGIV 146
>gi|414176969|ref|ZP_11431198.1| hypothetical protein HMPREF9695_04844 [Afipia broomeae ATCC 49717]
gi|410887122|gb|EKS34934.1| hypothetical protein HMPREF9695_04844 [Afipia broomeae ATCC 49717]
Length = 188
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 103/157 (65%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F +A SPL + LF + GV VF+G DF+TVTK DD DW+ LKP I IM+
Sbjct: 27 TMEFTDRDSATRSPLAERLFGVPGVTGVFYGSDFVTVTK--DDSDWQHLKPAILGVIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
+ SG P+L D Q P ++ E D ETV +IK+LL+TRIRP V DGGDI F F
Sbjct: 85 YMSGAPLLADGQVADGDAPHAEEFFSEADTETVAVIKDLLETRIRPAVASDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G+V L M+GSC CPSS TLK+G+QN+L+ +IP+
Sbjct: 145 KDGIVYLDMKGSCAGCPSSTATLKHGIQNLLKHFIPD 181
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
+IK+LL+TRIRP V DGGDI F F+DG+ L+ G P+ A + LL
Sbjct: 119 VIKDLLETRIRPAVASDGGDITFRGFKDGIVYLDMKGSCAGCPSSTATLKHGIQNLL 175
>gi|345565107|gb|EGX48062.1| hypothetical protein AOL_s00081g166 [Arthrobotrys oligospora ATCC
24927]
Length = 311
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/160 (50%), Positives = 109/160 (68%), Gaps = 3/160 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
VL +I++ +G+ SPL + LF+++GV SVF+G DFITVTK D + W LLKPE+
Sbjct: 105 VLPANASSIEYTSGRQTTNSPLARSLFQLDGVTSVFYGPDFITVTKAPDSL-WHLLKPEV 163
Query: 90 FATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
FA I ++ ++G PV+ + + DT E D E V MIKELLDTRIRP +QEDGGDI++
Sbjct: 164 FALITEYLNNGQPVVQGEILENEDTKAQEGDSEVVSMIKELLDTRIRPAIQEDGGDIEYR 223
Query: 149 SFQ-GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F G V LK++G+C +C SS VTLK G+++ML YI E
Sbjct: 224 GFTDAGQVLLKLRGACRTCDSSTVTLKTGIESMLMHYIEE 263
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELLDTRIRP +QEDGGDI++ F D
Sbjct: 200 MIKELLDTRIRPAIQEDGGDIEYRGFTDA 228
>gi|242802633|ref|XP_002484010.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
gi|218717355|gb|EED16776.1| NifU-related protein [Talaromyces stipitatus ATCC 10500]
Length = 321
Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 106/153 (69%), Gaps = 13/153 (8%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL L +EGV SVF+G DFITVTKQ D V+W +KPE+F+ I + +SG P++
Sbjct: 125 HPSPLAAKLLNVEGVSSVFYGPDFITVTKQSD-VNWAHIKPEVFSLITEVVTSGEPIVNT 183
Query: 107 AQPSS-----------DTV-IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
+ +S DT+ +E+DDE V MIKELL+TRIRP +QEDGGDI+F F+ G+
Sbjct: 184 VERTSGAQDAQEGGGEDTLSYNEEDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGI 243
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 244 VLLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 276
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F++G++
Sbjct: 214 MIKELLETRIRPAIQEDGGDIEFRGFENGIV 244
>gi|338972707|ref|ZP_08628078.1| NifU protein [Bradyrhizobiaceae bacterium SG-6C]
gi|414169645|ref|ZP_11425378.1| hypothetical protein HMPREF9696_03233 [Afipia clevelandensis ATCC
49720]
gi|338233868|gb|EGP08987.1| NifU protein [Bradyrhizobiaceae bacterium SG-6C]
gi|410885377|gb|EKS33192.1| hypothetical protein HMPREF9696_03233 [Afipia clevelandensis ATCC
49720]
Length = 188
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 103/157 (65%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F +A SPL + LF + GV VF+G DF+TVTK DD DW+ LKP I IM+
Sbjct: 27 TMEFTDRDSAARSPLAERLFAVPGVTGVFYGSDFVTVTK--DDSDWQHLKPAILGVIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
+ SG P+L D Q P ++ E D ETV +IK+LL+TRIRP V DGGDI F F
Sbjct: 85 YMSGAPLLADGQVADGDAPHAEEFFDEADTETVAVIKDLLETRIRPAVAGDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G+V L M+GSC CPSS TLK+G+QN+L+ +IP+
Sbjct: 145 KEGIVYLDMKGSCAGCPSSTATLKHGIQNLLKHFIPD 181
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
+IK+LL+TRIRP V DGGDI F F++G+ L+ G P+ A + LL
Sbjct: 119 VIKDLLETRIRPAVAGDGGDITFRGFKEGIVYLDMKGSCAGCPSSTATLKHGIQNLL 175
>gi|433771605|ref|YP_007302072.1| thioredoxin-like protein [Mesorhizobium australicum WSM2073]
gi|433663620|gb|AGB42696.1| thioredoxin-like protein [Mesorhizobium australicum WSM2073]
Length = 189
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 98/148 (66%), Gaps = 7/148 (4%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
AA SPL LF I GV VFFG+DFITV+K D DW+ LKP I IM+ F SG PV+
Sbjct: 36 AAIASPLAGRLFEIPGVTGVFFGYDFITVSK--DGPDWQHLKPAILGAIMEHFMSGAPVM 93
Query: 105 TDAQPSSDT-----VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
A P+++T + D+E V IKELLDTR+RP V +DGGDI F F+ G V L M
Sbjct: 94 AKAGPAAETSQTGEFYDKADEELVITIKELLDTRVRPAVAQDGGDITFRGFENGTVFLHM 153
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+G+C CPSS TLK+G+QN+L+ ++PE
Sbjct: 154 KGACAGCPSSTATLKHGIQNLLRHFVPE 181
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F++G +
Sbjct: 120 IKELLDTRVRPAVAQDGGDITFRGFENGTV 149
>gi|218461569|ref|ZP_03501660.1| Scaffold protein Nfu/NifU [Rhizobium etli Kim 5]
Length = 188
Score = 155 bits (393), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 102/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K DD +W+ LKP I +IM+
Sbjct: 27 TAEFRSAEEAQASPLAARLFEIPGVTGVYFGYDFISVSK--DDAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDADAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELL+TR+RP V +DGGDI F F+DG
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDG 147
>gi|239830990|ref|ZP_04679319.1| Scaffold protein Nfu/NifU [Ochrobactrum intermedium LMG 3301]
gi|239823257|gb|EEQ94825.1| Scaffold protein Nfu/NifU [Ochrobactrum intermedium LMG 3301]
Length = 211
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 107/173 (61%), Gaps = 12/173 (6%)
Query: 24 ISFQDGVLEEPGQTIDF--PTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVD 81
+ F G + P T DF P+ A SPL LF + GV VFFG+DFITVTK DD +
Sbjct: 35 LKFLPGKVVMPEGTADFRDPS-TAGNTSPLAAKLFSVPGVTGVFFGYDFITVTK--DDGE 91
Query: 82 WKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIH-------EDDDETVQMIKELLDTRI 134
W+ LKP I TIM+ F SG P + + H E D ETV++IKEL++TR+
Sbjct: 92 WQHLKPAILGTIMEHFMSGAPAMAGNSNADAAAAHGDEEFFDEADAETVEIIKELIETRV 151
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
RP V +DGGDI F F+ G V L M+G+C+ CPSS TLK+G+QN+L+ ++PE
Sbjct: 152 RPAVAQDGGDITFRGFENGTVFLNMKGACSGCPSSTATLKHGIQNLLRHFVPE 204
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IKEL++TR+RP V +DGGDI F F++G +
Sbjct: 142 IIKELIETRVRPAVAQDGGDITFRGFENGTV 172
>gi|67516331|ref|XP_658051.1| hypothetical protein AN0447.2 [Aspergillus nidulans FGSC A4]
gi|40747390|gb|EAA66546.1| hypothetical protein AN0447.2 [Aspergillus nidulans FGSC A4]
gi|259489306|tpe|CBF89467.1| TPA: NifU-related protein (AFU_orthologue; AFUA_1G04680)
[Aspergillus nidulans FGSC A4]
Length = 326
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 106/170 (62%), Gaps = 22/170 (12%)
Query: 39 DFPTGQAAYCSP-----------LGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
DFPT Y SP L LF +EGV+SVFFG DFITVTK D +W +KP
Sbjct: 114 DFPTSFLEYLSPRSTLAPPHPSTLAANLFNVEGVQSVFFGTDFITVTKASD-TNWAHIKP 172
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDT----------VIHEDDDETVQMIKELLDTRIRPT 137
E+F+ I +SG P++ + S + +E+DDE V MIKELL+TRIRP
Sbjct: 173 EVFSLITQAVTSGEPIVNTVEKSGASGQKGGEEDSLSYNEEDDEVVSMIKELLETRIRPA 232
Query: 138 VQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+QEDGGDI+F F+ G+V LK++G+C +C SS VTL+NG+++ML YI E
Sbjct: 233 IQEDGGDIEFRGFENGIVMLKLRGACRTCDSSTVTLRNGIESMLMHYIEE 282
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F++G++
Sbjct: 220 MIKELLETRIRPAIQEDGGDIEFRGFENGIV 250
>gi|407768119|ref|ZP_11115498.1| putative iron-sulfur cluster scaffold, NifU-like protein
[Thalassospira xiamenensis M-5 = DSM 17429]
gi|407288832|gb|EKF14309.1| putative iron-sulfur cluster scaffold, NifU-like protein
[Thalassospira xiamenensis M-5 = DSM 17429]
Length = 189
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 100/153 (65%), Gaps = 3/153 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F SPL + LF +EG+ VF G DFIT+TK DD DW+ LKP+I IM+
Sbjct: 28 TANFTATDTDVKSPLARKLFEVEGITGVFLGGDFITITK-DDAKDWQTLKPQILGGIMEH 86
Query: 97 FSSGLPVL--TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
++SG PVL + + + DDE V IKELLDTR+RP V +DGGDI F F+ GV
Sbjct: 87 YTSGQPVLDQNSGAATGASTASDGDDELVSQIKELLDTRVRPAVAQDGGDIVFHKFEDGV 146
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V L+M G+C+ CPSS TLK G++NML++Y+PE
Sbjct: 147 VFLEMHGACSGCPSSTATLKMGIENMLRYYVPE 179
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
IKELLDTR+RP V +DGGDI F F+DGV LE G P+ A
Sbjct: 118 IKELLDTRVRPAVAQDGGDIVFHKFEDGVVFLEMHGACSGCPSSTA 163
>gi|390603762|gb|EIN13153.1| HIRA-interacting protein 5 [Punctularia strigosozonata HHB-11173
SS5]
Length = 218
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 108/157 (68%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ +F +AA SPL L I+GV++VFFG DF+TV+K+ D V W ++KPE++AT+M+
Sbjct: 27 SAEFLDTRAALASPLALRLMGIDGVRAVFFGPDFVTVSKERD-VPWSVVKPEVYATLMEH 85
Query: 97 FSSGLPVLTDAQPS-----SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
FSSG P+ + DT I E D ETV M+KELLDTR+RP + EDGGDI++
Sbjct: 86 FSSGAPLFRSEEERLSAGPQDTRILETDSETVAMVKELLDTRVRPAIMEDGGDIEYRGMT 145
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G+V++K++GSC C SS VTLK+G++ ML YIPE
Sbjct: 146 EDGIVQVKLKGSCRGCDSSTVTLKSGIERMLMHYIPE 182
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF-QDGVLE 32
M+KELLDTR+RP + EDGGDI++ +DG+++
Sbjct: 119 MVKELLDTRVRPAIMEDGGDIEYRGMTEDGIVQ 151
>gi|13474434|ref|NP_106002.1| hypothetical protein mll5315 [Mesorhizobium loti MAFF303099]
gi|14025187|dbj|BAB51788.1| mll5315 [Mesorhizobium loti MAFF303099]
Length = 189
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/148 (52%), Positives = 98/148 (66%), Gaps = 7/148 (4%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
AA SPL LF I GV VFFG+DFITVTK D DW+ LKP I IM+ F SG PV+
Sbjct: 36 AATASPLAGRLFEIPGVTGVFFGYDFITVTK--DGPDWQHLKPAILGAIMEHFMSGAPVM 93
Query: 105 TDAQPSSDT-----VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
+ P+++T + D+E V IKELLDTR+RP V +DGGDI F F+ G V L M
Sbjct: 94 AKSGPAAETSQTGEFYDKADEELVITIKELLDTRVRPAVAQDGGDITFRGFENGTVFLHM 153
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+G+C CPSS TLK+G+QN+L+ ++PE
Sbjct: 154 KGACAGCPSSTATLKHGIQNLLRHFVPE 181
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F++G +
Sbjct: 120 IKELLDTRVRPAVAQDGGDITFRGFENGTV 149
>gi|153007498|ref|YP_001368713.1| scaffold protein Nfu/NifU [Ochrobactrum anthropi ATCC 49188]
gi|404317037|ref|ZP_10964970.1| scaffold protein Nfu/NifU [Ochrobactrum anthropi CTS-325]
gi|151559386|gb|ABS12884.1| Scaffold protein Nfu/NifU [Ochrobactrum anthropi ATCC 49188]
Length = 190
Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 105/172 (61%), Gaps = 10/172 (5%)
Query: 24 ISFQDGVLEEPGQTIDFP-TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
+ F G + P T DF A SPL LF + GV VFFG+DFITVTK+D + W
Sbjct: 14 LKFLPGKVVMPEGTADFRDASTAGNTSPLAAKLFSVPGVTGVFFGYDFITVTKEDGE--W 71
Query: 83 KLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIH-------EDDDETVQMIKELLDTRIR 135
+ LKP I TIM+ F SG P + + H E D ETV++IKEL++TR+R
Sbjct: 72 QHLKPAILGTIMEHFMSGAPAMAGNSNADAAAAHGEEEFFDEADAETVEIIKELIETRVR 131
Query: 136 PTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
P V +DGGDI F F+ G V L M+G+C+ CPSS TLK+G+QN+L+ ++PE
Sbjct: 132 PAVAQDGGDITFRGFENGTVFLNMKGACSGCPSSTATLKHGIQNLLRHFVPE 183
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IKEL++TR+RP V +DGGDI F F++G +
Sbjct: 121 IIKELIETRVRPAVAQDGGDITFRGFENGTV 151
>gi|254487441|ref|ZP_05100646.1| NifU domain protein [Roseobacter sp. GAI101]
gi|214044310|gb|EEB84948.1| NifU domain protein [Roseobacter sp. GAI101]
Length = 203
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 104/164 (63%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP +AA SPL LF ++GV VFFG DF+TVTK D ++W LKP
Sbjct: 35 PGQTVLEMGTADFPAPEAASSSPLATRLFAVDGVTGVFFGTDFVTVTKADT-IEWDHLKP 93
Query: 88 EIFATIMDFFSSGLPVLTDA-QPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDI 145
+ IM+ F SG V+ + +S H +D V IKELLD+R+RP V +DGGDI
Sbjct: 94 ALLGAIMEHFQSGQSVMEQGHEHASGHAEHTGEDGAIVGQIKELLDSRVRPAVAQDGGDI 153
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F F+ GVV L MQG+C CPSS +TLK G++N+L+ YIPE T
Sbjct: 154 TFHGFERGVVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPEVT 197
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F+ GV+
Sbjct: 134 IKELLDSRVRPAVAQDGGDITFHGFERGVV 163
>gi|347734811|ref|ZP_08867800.1| thioredoxin [Azospirillum amazonense Y2]
gi|346922129|gb|EGY02618.1| thioredoxin [Azospirillum amazonense Y2]
Length = 184
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 97/151 (64%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF AA SPL + LF ++GV+ VF G DF+TVTK DW LKP+I IM+
Sbjct: 27 TADFADRTAADRSPLAQALFDVDGVERVFLGGDFVTVTKGGSQ-DWFTLKPQILGRIMEH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F++ PVL D + E+D E + IKELLDTR+RP V +DGGDI F F GVV
Sbjct: 86 FAAERPVLLDEAEDGHSEGEEEDSEIITQIKELLDTRVRPAVAQDGGDITFHGFDKGVVY 145
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+GSC CPSS TLK G++NML++YIPE
Sbjct: 146 LTMKGSCAGCPSSTATLKAGIENMLRYYIPE 176
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F GV+
Sbjct: 115 IKELLDTRVRPAVAQDGGDITFHGFDKGVV 144
>gi|444309193|ref|ZP_21144833.1| scaffold protein Nfu/NifU [Ochrobactrum intermedium M86]
gi|443487584|gb|ELT50346.1| scaffold protein Nfu/NifU [Ochrobactrum intermedium M86]
Length = 190
Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 107/173 (61%), Gaps = 12/173 (6%)
Query: 24 ISFQDGVLEEPGQTIDF--PTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVD 81
+ F G + P T DF P+ A SPL LF + GV VFFG+DFITVTK DD +
Sbjct: 14 LKFLPGKVVMPEGTADFRDPS-TAGNTSPLAAKLFSVPGVTGVFFGYDFITVTK--DDGE 70
Query: 82 WKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIH-------EDDDETVQMIKELLDTRI 134
W+ LKP I TIM+ F SG P + + H E D ETV++IKEL++TR+
Sbjct: 71 WQHLKPAILGTIMEHFMSGAPAMAGNSNADAAAAHGDEEFFDEADAETVEIIKELIETRV 130
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
RP V +DGGDI F F+ G V L M+G+C+ CPSS TLK+G+QN+L+ ++PE
Sbjct: 131 RPAVAQDGGDITFRGFENGTVFLNMKGACSGCPSSTATLKHGIQNLLRHFVPE 183
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IKEL++TR+RP V +DGGDI F F++G +
Sbjct: 121 IIKELIETRVRPAVAQDGGDITFRGFENGTV 151
>gi|424879742|ref|ZP_18303374.1| thioredoxin-like protein [Rhizobium leguminosarum bv. trifolii
WU95]
gi|392516105|gb|EIW40837.1| thioredoxin-like protein [Rhizobium leguminosarum bv. trifolii
WU95]
Length = 188
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K D+ DW+ LKP I +IM+
Sbjct: 27 TAEFRSTEEAQASPLAARLFEISGVTGVYFGYDFISVSK--DNADWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDADAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG--VLEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELL+TR+RP V +DGGDI F F+DG L G P+ A + LL
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCAGCPSSTATLKHGVQNLL 175
>gi|241202790|ref|YP_002973886.1| Scaffold protein Nfu/NifU [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856680|gb|ACS54347.1| Scaffold protein Nfu/NifU [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 188
Score = 155 bits (391), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K D+ DW+ LKP I +IM+
Sbjct: 27 TAEFRSTEEAQASPLAARLFEISGVTGVYFGYDFISVSK--DNADWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDADAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG--VLEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELL+TR+RP V +DGGDI F F+DG L G P+ A + LL
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCAGCPSSTATLKHGVQNLL 175
>gi|424873382|ref|ZP_18297044.1| thioredoxin-like protein [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393169083|gb|EJC69130.1| thioredoxin-like protein [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 188
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K D+ DW+ LKP I +IM+
Sbjct: 27 TAEFRSTEEAQASPLAARLFEISGVTGVYFGYDFISVSK--DNADWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDADAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 RDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG--VLEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELL+TR+RP V +DGGDI F F+DG L G P+ A + LL
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFRDGKVYLNMKGSCAGCPSSTATLKHGVQNLL 175
>gi|452752312|ref|ZP_21952055.1| NifU-like domain protein [alpha proteobacterium JLT2015]
gi|451960388|gb|EMD82801.1| NifU-like domain protein [alpha proteobacterium JLT2015]
Length = 186
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 103/164 (62%), Gaps = 2/164 (1%)
Query: 26 FQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLL 85
F+ G P T DF T +AA SPL LF + V VF+G DF++VTK DW L
Sbjct: 16 FRPGRSVSPEGTHDFDTPEAAEASPLASALFALGDVTGVFYGEDFVSVTKDPSGGDWSAL 75
Query: 86 KPEIFATIMDFFSSGLPVLTDAQPSSDTVI--HEDDDETVQMIKELLDTRIRPTVQEDGG 143
KP++ + I+D F+SG P+ P + I +E+D + + I ELLD R+RP V DGG
Sbjct: 76 KPDVMSLIVDHFASGAPLFFAGAPDTAPQIDENEEDADIRRQITELLDDRVRPAVAGDGG 135
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI F F+ GVV L+MQG+C CPSS TLKNG++N+L++Y+PE
Sbjct: 136 DIVFHGFKEGVVYLRMQGACAGCPSSTATLKNGIENLLRYYVPE 179
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I ELLD R+RP V DGGDI F F++GV+
Sbjct: 118 ITELLDDRVRPAVAGDGGDIVFHGFKEGVV 147
>gi|424888948|ref|ZP_18312551.1| thioredoxin-like protein [Rhizobium leguminosarum bv. trifolii
WSM2012]
gi|393174497|gb|EJC74541.1| thioredoxin-like protein [Rhizobium leguminosarum bv. trifolii
WSM2012]
Length = 188
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K DD +W+ LKP I +IM+
Sbjct: 27 TAEFRSAEEAEASPLAARLFEIPGVTGVYFGYDFISVSK--DDAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDLDAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELL+TR+RP V +DGGDI F F+DG
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDG 147
>gi|443921931|gb|ELU41457.1| NifU-like protein c [Rhizoctonia solani AG-1 IA]
Length = 272
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/171 (46%), Positives = 111/171 (64%), Gaps = 8/171 (4%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV T +F ++A SPL LF IEGV+SVFFG DF+TV+K D + W
Sbjct: 83 LKFIPGVEVMSSGTAEFVDTRSALASPLAIRLFGIEGVRSVFFGPDFVTVSK-DSENTWS 141
Query: 84 LLKPEIFATIMDFFSSGLPVLT-----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTV 138
+KPEI++ IM+ F+SG P+ +A DT I + D +TV MIKELL+TR+RP++
Sbjct: 142 TIKPEIYSVIMEHFTSGTPLFRSEEDREAAGPQDTKILDTDSDTVAMIKELLETRVRPSI 201
Query: 139 QEDGGDIQFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
EDGGDI++ F G+V++K++GSC C SS VTLK G++ M+ YIPE
Sbjct: 202 MEDGGDIEYRGFNEATGIVQVKLKGSCRGCSSSTVTLKTGIERMMMHYIPE 252
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TR+RP++ EDGGDI++ F +
Sbjct: 188 MIKELLETRVRPSIMEDGGDIEYRGFNEA 216
>gi|209547636|ref|YP_002279553.1| Scaffold protein Nfu/NifU [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|402490596|ref|ZP_10837385.1| Scaffold protein Nfu/NifU [Rhizobium sp. CCGE 510]
gi|424915808|ref|ZP_18339172.1| thioredoxin-like protein [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|209533392|gb|ACI53327.1| Scaffold protein Nfu/NifU [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|392851984|gb|EJB04505.1| thioredoxin-like protein [Rhizobium leguminosarum bv. trifolii
WSM597]
gi|401810622|gb|EJT02995.1| Scaffold protein Nfu/NifU [Rhizobium sp. CCGE 510]
Length = 188
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K DD +W+ LKP I +IM+
Sbjct: 27 TAEFRSAEEAEASPLAARLFEIPGVTGVYFGYDFISVSK--DDAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDVDAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELL+TR+RP V +DGGDI F F+DG
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDG 147
>gi|358055013|dbj|GAA98782.1| hypothetical protein E5Q_05470 [Mixia osmundae IAM 14324]
Length = 288
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/173 (47%), Positives = 109/173 (63%), Gaps = 10/173 (5%)
Query: 24 ISFQDGV-LEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
I F GV + G T +F T +A SPL LF I GVKSVF+G DF+T+ K+ + W
Sbjct: 82 IKFVPGVPVTTNGSTHEFTTPTSALVSPLAVSLFSINGVKSVFYGPDFVTINKEPE-ASW 140
Query: 83 KLLKPEIFATIMDFFSSGLPVLTDAQPSS------DTVIHEDDDETVQMIKELLDTRIRP 136
L+KPEIF+ +M+ F++G + S DT I DD ETV MIKELLDTR+RP
Sbjct: 141 ALMKPEIFSFLMEHFTAGTDLFRSGSAESQGLGPEDTRILPDDSETVAMIKELLDTRVRP 200
Query: 137 TVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+QEDGGDI++ F G+V + ++GSC C SS VTLK+G++ ML YIPE
Sbjct: 201 AIQEDGGDIEYRGFIEDTGIVNVSLKGSCRGCDSSTVTLKSGIERMLTHYIPE 253
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELLDTR+RP +QEDGGDI++ F
Sbjct: 189 MIKELLDTRVRPAIQEDGGDIEYRGF 214
>gi|365858892|ref|ZP_09398791.1| NifU-like protein [Acetobacteraceae bacterium AT-5844]
gi|363713404|gb|EHL97021.1| NifU-like protein [Acetobacteraceae bacterium AT-5844]
Length = 188
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 110/169 (65%), Gaps = 5/169 (2%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F+ QD V+ E G T DF + ++A SPL + LF ++GV VF G DF+T+TK ++
Sbjct: 14 LKFLPGQD-VMGERG-TADFTSAESATRSPLAEALFALDGVARVFLGADFVTITKSEE-A 70
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHE--DDDETVQMIKELLDTRIRPTV 138
DW+ L+P + TIM+ +G PV+ D D E V IKELLDTR+RP V
Sbjct: 71 DWQALRPVVLGTIMEHAMAGRPVMLGDDSEEDEAEDIDPADAEVVAQIKELLDTRVRPAV 130
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI F F+ G+VKL+MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 131 AGDGGDIVFRGFRDGIVKLRMQGACSGCPSSRATLKHGVENMLRHYVPE 179
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELLDTR+RP V DGGDI F F+DG+++
Sbjct: 118 IKELLDTRVRPAVAGDGGDIVFRGFRDGIVK 148
>gi|414164427|ref|ZP_11420674.1| hypothetical protein HMPREF9697_02575 [Afipia felis ATCC 53690]
gi|410882207|gb|EKS30047.1| hypothetical protein HMPREF9697_02575 [Afipia felis ATCC 53690]
Length = 187
Score = 154 bits (390), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/156 (48%), Positives = 106/156 (67%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F + +A SPL LF I GV VF+G DF+TVTK DD DW+ LKP I TIM+
Sbjct: 27 TMEFTSRDSAVRSPLAVKLFDIPGVTGVFYGSDFVTVTK--DDGDWQHLKPAILGTIMEH 84
Query: 97 FSSGLPVLTD-----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
+ SG P+L D A P ++ +E D ETV +IK++++TR+RP V DGGDI F F+
Sbjct: 85 YMSGAPILADGAQPDAGPHAEEFFNEADAETVGIIKDIIETRVRPAVASDGGDITFRGFK 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V L M+GSC+ CPSS TLK+G+QN+L+ ++P+
Sbjct: 145 DGIVFLDMKGSCSGCPSSTATLKHGIQNLLKHFVPD 180
Score = 42.7 bits (99), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK++++TR+RP V DGGDI F F+DG++
Sbjct: 118 IIKDIIETRVRPAVASDGGDITFRGFKDGIV 148
>gi|296533479|ref|ZP_06896057.1| NifU domain protein [Roseomonas cervicalis ATCC 49957]
gi|296266192|gb|EFH12239.1| NifU domain protein [Roseomonas cervicalis ATCC 49957]
Length = 187
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/170 (47%), Positives = 110/170 (64%), Gaps = 8/170 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F+ QD V+ G T DF AA SPL + LF +EGV +F G DFITVTK + V
Sbjct: 14 LKFLPGQD-VMGSRG-TADFTNAGAAARSPLAERLFGLEGVARIFLGSDFITVTKAEG-V 70
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDD---DETVQMIKELLDTRIRPT 137
+W+ LKP++ IM+ +G PV+ + + D + + D E V IKELLDTR+RP
Sbjct: 71 EWQALKPQVLGAIMEHVMAGRPVVLEEE--GDAALEDSDPADAEIVAQIKELLDTRVRPA 128
Query: 138 VQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V DGGDI F F+ G+VKL +QG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 129 VAGDGGDIVFRGFRDGIVKLHLQGACSGCPSSRATLKHGVENMLRHYVPE 178
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELLDTR+RP V DGGDI F F+DG+++
Sbjct: 117 IKELLDTRVRPAVAGDGGDIVFRGFRDGIVK 147
>gi|327348799|gb|EGE77656.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis ATCC 18188]
Length = 318
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 104/149 (69%), Gaps = 9/149 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
Y SPL L ++GV +VF+G DFIT+TK D +W +KPE+F+ I + ++G P++
Sbjct: 126 YPSPLAAKLLNVDGVSAVFYGPDFITITKAGD-ANWAHIKPEVFSLITEAVTTGEPIINV 184
Query: 107 AQ-------PSSDTV-IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
A+ P D++ +EDDDE V MIKELL+TRIRP +QEDGGDI+F F+ G+V LK
Sbjct: 185 AEAGAGGPPPEEDSLSYNEDDDEVVSMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLK 244
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++G+C +C SS VTLKNG+++ML YI E
Sbjct: 245 LRGACRTCDSSTVTLKNGIESMLMHYIEE 273
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F+DG++
Sbjct: 211 MIKELLETRIRPAIQEDGGDIEFRGFEDGIV 241
>gi|302381462|ref|YP_003817285.1| Scaffold protein Nfu/NifU [Brevundimonas subvibrioides ATCC 15264]
gi|302192090|gb|ADK99661.1| Scaffold protein Nfu/NifU [Brevundimonas subvibrioides ATCC 15264]
Length = 185
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 106/159 (66%), Gaps = 6/159 (3%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
PG + +F + A SPL + LF++E V VFFG D I+VT+ + DW +KPEI + I
Sbjct: 24 PGGSREFLSIDQATASPLAEALFQLEDVSGVFFGGDHISVTRAEHGRDWSEMKPEILSVI 83
Query: 94 MDFFSSGLPVLTDAQPSSDTVIH-EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-- 150
MD F SG P++ + +D V H EDD E V IK LLD+RIRP V +DGGDI F +F
Sbjct: 84 MDHFVSGQPLMREG---ADAVDHAEDDSEIVAEIKSLLDSRIRPAVAQDGGDILFDAFDE 140
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+ GV++L+M+G+C CPSS +TLK GV+ M++ Y+PE T
Sbjct: 141 ESGVLRLRMRGACAGCPSSAMTLKAGVEQMMRHYVPEVT 179
Score = 39.7 bits (91), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF--QDGVL 31
IK LLD+RIRP V +DGGDI F +F + GVL
Sbjct: 114 IKSLLDSRIRPAVAQDGGDILFDAFDEESGVL 145
>gi|340509344|gb|EGR34894.1| hypothetical protein IMG5_001220 [Ichthyophthirius multifiliis]
Length = 174
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
I+F + + SPL K LF ++G+ VF+G D+I+V+K+++ +W LKP IF+ I +
Sbjct: 6 AIEFTAARYTHKSPLAKKLFSVDGINRVFYGKDYISVSKEEE-YEWSELKPLIFSLINEQ 64
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
FSS P++TD DT I+E+D E V +IKE++DTRIRP VQ+DGGD+ + +F + G+
Sbjct: 65 FSSKEPLITDKPEPEDTKINENDSEQVILIKEIIDTRIRPLVQDDGGDVVYRNFDEKTGL 124
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V L M G+CT CPSS VTLK G+Q ML YIPE
Sbjct: 125 VTLTMMGACTGCPSSQVTLKQGIQKMLMHYIPE 157
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG----VLEEPGQTIDFPTGQAAYCSPLGKLLF 56
+IKE++DTRIRP VQ+DGGD+ + +F + L G P+ Q + K+L
Sbjct: 93 LIKEIIDTRIRPLVQDDGGDVVYRNFDEKTGLVTLTMMGACTGCPSSQVTLKQGIQKMLM 152
Query: 57 R-IEGVKSV 64
I VK+V
Sbjct: 153 HYIPEVKNV 161
>gi|239610759|gb|EEQ87746.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis ER-3]
Length = 318
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 104/149 (69%), Gaps = 9/149 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
Y SPL L ++GV +VF+G DFIT+TK D +W +KPE+F+ I + ++G P++
Sbjct: 126 YPSPLAAKLLNVDGVSAVFYGPDFITITKAGD-ANWAHIKPEVFSLITEAVTTGEPIINV 184
Query: 107 AQ-------PSSDTV-IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
A+ P D++ +EDDDE V MIKELL+TRIRP +QEDGGDI+F F+ G+V LK
Sbjct: 185 AEAGAGGPPPEEDSLSYNEDDDEVVSMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLK 244
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++G+C +C SS VTLKNG+++ML YI E
Sbjct: 245 LRGACRTCDSSTVTLKNGIESMLMHYIEE 273
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F+DG++
Sbjct: 211 MIKELLETRIRPAIQEDGGDIEFRGFEDGIV 241
>gi|261194942|ref|XP_002623875.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis SLH14081]
gi|239587747|gb|EEQ70390.1| HIRA-interacting protein 5 [Ajellomyces dermatitidis SLH14081]
Length = 318
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 104/149 (69%), Gaps = 9/149 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
Y SPL L ++GV +VF+G DFIT+TK D +W +KPE+F+ I + ++G P++
Sbjct: 126 YPSPLAAKLLNVDGVSAVFYGPDFITITKAGD-ANWAHIKPEVFSLITEAVTTGEPIINV 184
Query: 107 AQ-------PSSDTV-IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
A+ P D++ +EDDDE V MIKELL+TRIRP +QEDGGDI+F F+ G+V LK
Sbjct: 185 AEAGAGGPPPEEDSLSYNEDDDEVVSMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLK 244
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++G+C +C SS VTLKNG+++ML YI E
Sbjct: 245 LRGACRTCDSSTVTLKNGIESMLMHYIEE 273
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F+DG++
Sbjct: 211 MIKELLETRIRPAIQEDGGDIEFRGFEDGIV 241
>gi|346994778|ref|ZP_08862850.1| NifU domain-containing protein [Ruegeria sp. TW15]
Length = 187
Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 102/162 (62%), Gaps = 9/162 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP +AA SPL +F + GV VFFG+DF+TVTK DD V W +KP
Sbjct: 18 PGQTVLEAGTADFPNAEAAEKSPLATRIFGVAGVTGVFFGNDFVTVTKSDD-VQWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVL-TDAQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDI 145
I +M+ + S PV+ + + H +D E V IK+LLD+R+RP V +DGGDI
Sbjct: 77 AILGAVMEHYQSDQPVMGANVDAGAGHAEHTGEDAEIVHQIKDLLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F G+V L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 TFHGFDKGIVYLHMQGACAGCPSSTITLKMGIENLLRHYIPE 178
Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+LLD+R+RP V +DGGDI F F G++
Sbjct: 117 IKDLLDSRVRPAVAQDGGDITFHGFDKGIV 146
>gi|399036362|ref|ZP_10733467.1| thioredoxin-like protein [Rhizobium sp. CF122]
gi|398066021|gb|EJL57623.1| thioredoxin-like protein [Rhizobium sp. CF122]
Length = 188
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 102/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + A SPL LF I GV V+FG+DFI+V+K D+ +W+ LKP I +IM+
Sbjct: 27 TAEFRSADEAQASPLAARLFEIAGVTGVYFGYDFISVSK--DNAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTV------IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA S+ + E D+ V IKELLDTR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASVLSEDLDAGGEFFDEADESIVLTIKELLDTRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFVPE 181
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELLDTR+RP V +DGGDI F F+DG
Sbjct: 120 IKELLDTRVRPAVAQDGGDITFRGFKDG 147
>gi|218678782|ref|ZP_03526679.1| nitrogen fixation protein [Rhizobium etli CIAT 894]
Length = 188
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K D+ +W+ LKP I +IM+
Sbjct: 27 TAEFRSAEEAEASPLAARLFEIPGVTGVYFGYDFISVSK--DNAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDADAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELL+TR+RP V +DGGDI F F+DG
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDG 147
>gi|144900396|emb|CAM77260.1| NifU domain protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 182
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 106/155 (68%), Gaps = 5/155 (3%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P T DF + +AA SPL LF ++GV SVF G DFITV K + W LKP + + I
Sbjct: 24 PAGTADFGSAEAAIRSPLAAKLFTVDGVASVFLGGDFITVGKTEA-ATWGTLKPLLLSAI 82
Query: 94 MDFFSSGL-PVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
MDFF++GL PV+ + ++ V ++ + V+ IKELLDTR+RP V +DGGDI F SF
Sbjct: 83 MDFFTAGLLPVINEG---TEKVSDGEETDIVRQIKELLDTRVRPAVAQDGGDIIFRSFDD 139
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V + +QG+C+ CPSS TLK+G++NML++Y+PE
Sbjct: 140 GIVYVHLQGACSGCPSSTATLKHGIENMLKYYVPE 174
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F SF DG++
Sbjct: 113 IKELLDTRVRPAVAQDGGDIIFRSFDDGIV 142
>gi|146278315|ref|YP_001168474.1| NifU domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
gi|145556556|gb|ABP71169.1| nitrogen-fixing NifU domain protein [Rhodobacter sphaeroides ATCC
17025]
Length = 186
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 95/140 (67%), Gaps = 2/140 (1%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL + +F GV SVFFG DFI VTK+D+ V W +KP I IM+ + SG PVL Q
Sbjct: 39 SPLARRIFGAGGVASVFFGTDFIAVTKEDEVV-WDHVKPAILGAIMEHYQSGAPVLEGEQ 97
Query: 109 PSSDTVIHED-DDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCP 167
+S H+ D+E V+ IKELLDTR+RP V +DGGDI F F G+V L MQG+C CP
Sbjct: 98 AASGHATHDGPDEEIVRQIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCP 157
Query: 168 SSVVTLKNGVQNMLQFYIPE 187
SS +TLK G++N+L+ YIPE
Sbjct: 158 SSTLTLKMGIENLLRHYIPE 177
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F G++
Sbjct: 116 IKELLDTRVRPAVAQDGGDITFHGFDRGIV 145
>gi|406707466|ref|YP_006757818.1| NifU family protein,scaffold protein, Nfu/NifU family [alpha
proteobacterium HIMB59]
gi|406653242|gb|AFS48641.1| NifU family protein,scaffold protein, Nfu/NifU family [alpha
proteobacterium HIMB59]
Length = 185
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
TI F +A SPL + LF ++GV+SVFFG DFIT+TK + + +W L+KP I I++
Sbjct: 27 TIFFQNQDSAVNSPLAQNLFNVKGVESVFFGSDFITITKAEAN-EWTLMKPAILGCIIEH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F+ PV+++ P ++ E+D + V+ IKELLDT++RP V DGGDI F + G+V
Sbjct: 86 FTMNKPVISEQAPRTEHTYDENDSDVVKKIKELLDTKVRPAVAMDGGDIIFDKYNEGIVF 145
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L+MQG+C CPSS TLK G++NML+ YIPE
Sbjct: 146 LQMQGACQGCPSSTATLKMGIENMLKHYIPE 176
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDT++RP V DGGDI F + +G++
Sbjct: 115 IKELLDTKVRPAVAMDGGDIIFDKYNEGIV 144
>gi|420239538|ref|ZP_14743851.1| thioredoxin-like protein [Rhizobium sp. CF080]
gi|398080061|gb|EJL70890.1| thioredoxin-like protein [Rhizobium sp. CF080]
Length = 188
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 100/157 (63%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF A SPL + LF I GV V+FG+DFITVTK+ +W+ LKP I +IM+
Sbjct: 27 TADFRNAGEAEASPLAERLFGISGVTGVYFGYDFITVTKES--AEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQPSSDT------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ A ++ EDD+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGAPVMGGASTLAEASDVEGEFFDEDDETIVATIKELLETRVRPAVAQDGGDITFKGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+G+C+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 RDGTVYLNMKGACSGCPSSTATLKHGVQNLLKHFVPE 181
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F F+DG +
Sbjct: 120 IKELLETRVRPAVAQDGGDITFKGFRDGTV 149
>gi|405377524|ref|ZP_11031465.1| thioredoxin-like protein [Rhizobium sp. CF142]
gi|397325961|gb|EJJ30285.1| thioredoxin-like protein [Rhizobium sp. CF142]
Length = 188
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 100/157 (63%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F A SPL LF I GV V+FG+DFI+V+K DD +W+ LKP I +IM+
Sbjct: 27 TAEFRNADEAQASPLAARLFEIPGVTGVYFGYDFISVSK--DDAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDIDAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELL+TR+RP V +DGGDI F F+DG
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDG 147
>gi|421588185|ref|ZP_16033501.1| nitrogen fixation protein [Rhizobium sp. Pop5]
gi|403707155|gb|EJZ22232.1| nitrogen fixation protein [Rhizobium sp. Pop5]
Length = 188
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 102/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K DD +W+ LKP I +IM+
Sbjct: 27 TAEFLSAEEAEASPLAARLFDIPGVTGVYFGYDFISVSK--DDAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDVDAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELL+TR+RP V +DGGDI F F+DG
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDG 147
>gi|397603779|gb|EJK58515.1| hypothetical protein THAOC_21341 [Thalassiosira oceanica]
Length = 350
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/150 (54%), Positives = 109/150 (72%), Gaps = 4/150 (2%)
Query: 49 SPLGKLLFRI-EGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
SPL +LF + +G+KSV+ G+DF+TVTK + W+ L+ IFA IMDF+ SG P L +
Sbjct: 158 SPLANMLFSLDQGIKSVYLGNDFVTVTKYAE-AHWQHLQTPIFAAIMDFYGSGQPALREQ 216
Query: 108 QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKLKMQGSCTS 165
+DT I +DDDE V MIKELL+TRIRP VQEDGGDI+++ F+ G+V +++ GSC
Sbjct: 217 PEITDTTIFDDDDEVVAMIKELLETRIRPAVQEDGGDIKYVGFEEDTGIVTVQLAGSCVG 276
Query: 166 CPSSVVTLKNGVQNMLQFYIPETTPGLNME 195
CPSS VTLKNGV+NML YIPE T +++E
Sbjct: 277 CPSSSVTLKNGVENMLMHYIPEVTNVVSLE 306
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 26/28 (92%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP VQEDGGDI+++ F++
Sbjct: 234 MIKELLETRIRPAVQEDGGDIKYVGFEE 261
>gi|162147187|ref|YP_001601648.1| nitrogen fixation protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209544240|ref|YP_002276469.1| Scaffold protein Nfu/NifU [Gluconacetobacter diazotrophicus PAl 5]
gi|161785764|emb|CAP55335.1| putative nitrogen fixation protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531917|gb|ACI51854.1| Scaffold protein Nfu/NifU [Gluconacetobacter diazotrophicus PAl 5]
Length = 187
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 104/162 (64%), Gaps = 9/162 (5%)
Query: 34 PGQTIDFPTGQAAYCSP--------LGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLL 85
PG+TI A + SP L LF GV VF G DF+ VTK D+ DW +L
Sbjct: 18 PGRTIVPGRATADFVSPDAVAGRSKLADALFGQPGVARVFLGGDFVAVTK-DEATDWSVL 76
Query: 86 KPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
KP++ + ++DFF SG+P + D + +I +D+E V+ IKELLDTR+RP V DGGDI
Sbjct: 77 KPQLLSVLVDFFVSGMPAIEDDAAVEEELIAPEDEEIVRQIKELLDTRVRPAVAGDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F ++ GVV+L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 137 VFRGYRDGVVRLTMQGACSGCPSSRATLKHGVENMLRHYVPE 178
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELLDTR+RP V DGGDI F ++DGV+
Sbjct: 117 IKELLDTRVRPAVAGDGGDIVFRGYRDGVVR 147
>gi|67633331|gb|AAY78582.1| predicted thioredoxin-like protein [uncultured bacterium
MedeBAC82F10]
Length = 185
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/151 (49%), Positives = 102/151 (67%), Gaps = 1/151 (0%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
TI F +A SPL + LF I+GV+SVFFG DFIT+TK + + +W L+KP I I++
Sbjct: 27 TIFFQNQDSAVNSPLAQNLFNIKGVESVFFGSDFITITKAEAN-EWTLMKPAILGCIIEH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F+ PV++ P ++ E+D + V+ IKELLDT++RP V DGGDI F + G+V
Sbjct: 86 FTMNKPVISKQAPRTEHTYDENDSDVVKKIKELLDTKVRPAVAMDGGDIIFDKYNEGIVF 145
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L+MQG+C CPSS TLK G++NML+ YIPE
Sbjct: 146 LQMQGACQGCPSSTATLKMGIENMLKHYIPE 176
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDT++RP V DGGDI F + +G++
Sbjct: 115 IKELLDTKVRPAVAMDGGDIIFDKYNEGIV 144
>gi|110636361|ref|YP_676569.1| nitrogen-fixing NifU-like [Chelativorans sp. BNC1]
gi|110287345|gb|ABG65404.1| nitrogen-fixing NifU-like protein [Chelativorans sp. BNC1]
Length = 189
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 104/164 (63%), Gaps = 10/164 (6%)
Query: 30 VLEEPGQTIDFPTGQAAYC-SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPE 88
VLEE T DF + +A SPL LF + GV VFFG DFITVTK D DW+ LKP
Sbjct: 22 VLEE--GTADFRSADSAQAVSPLAARLFEVPGVTGVFFGFDFITVTK--DGADWQHLKPA 77
Query: 89 IFATIMDFFSSGLPVL-----TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGG 143
I TIM+ F SG PV+ ++ + +S E D+E V IKELL+TR+RP V +DGG
Sbjct: 78 ILGTIMEHFMSGQPVMAANDGSERETASSEFYDEADEEIVTTIKELLETRVRPAVAQDGG 137
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI F ++ G V L M+G+C CPSS TLK+G+QN+L ++PE
Sbjct: 138 DITFRGYENGTVFLHMKGACAGCPSSTATLKHGIQNLLHHFVPE 181
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLLFR 57
IKELL+TR+RP V +DGGDI F +++G L G P+ A + LL
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGYENGTVFLHMKGACAGCPSSTATLKHGIQNLLHH 177
>gi|212540194|ref|XP_002150252.1| NifU-related protein [Talaromyces marneffei ATCC 18224]
gi|210067551|gb|EEA21643.1| NifU-related protein [Talaromyces marneffei ATCC 18224]
Length = 321
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 105/153 (68%), Gaps = 13/153 (8%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL L IEG+ SVF+G DFITVTK DV+W +KPE+F+ I + +SG P++
Sbjct: 125 HPSPLAAKLLNIEGISSVFYGPDFITVTK-SSDVNWAHVKPEVFSLITEVVTSGEPIVNT 183
Query: 107 AQPSS-----------DTV-IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
+ +S DT+ +E+DDE V MIKELL+TRIRP +QEDGGDI+F F+ G+
Sbjct: 184 VEHTSGAQDAQEGGGEDTLGYNEEDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGI 243
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 244 VLLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 276
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F++G++
Sbjct: 214 MIKELLETRIRPAIQEDGGDIEFRGFENGIV 244
>gi|190890051|ref|YP_001976593.1| nitrogen fixation protein [Rhizobium etli CIAT 652]
gi|218509253|ref|ZP_03507131.1| nitrogen fixation protein [Rhizobium etli Brasil 5]
gi|190695330|gb|ACE89415.1| nitrogen fixation protein [Rhizobium etli CIAT 652]
Length = 188
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + A SPL LF I GV V+FG+DFI+V+K D+ +W+ LKP I +IM+
Sbjct: 27 TAEFRSAAEAEASPLAARLFEIPGVTGVYFGYDFISVSK--DNAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDADAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELL+TR+RP V +DGGDI F F+DG
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDG 147
>gi|225680672|gb|EEH18956.1| HIRA-interacting protein [Paracoccidioides brasiliensis Pb03]
Length = 317
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 74/149 (49%), Positives = 101/149 (67%), Gaps = 9/149 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
Y SPL L ++GV +VF+G DFIT+TK D +W +KPE+F+ I + ++G P++T
Sbjct: 126 YPSPLASKLLNVDGVSAVFYGPDFITITKAGD-ANWAHIKPEVFSLITEAVTAGDPIVTI 184
Query: 106 -------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
AQ +EDDDE V MIKELL+TRIRP +QEDGGDI+F F+ G+V LK
Sbjct: 185 SEAGAGSKAQEEDSLSYNEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVNLK 244
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++G+C +C SS VTLKNG+++ML YI E
Sbjct: 245 LRGACRTCDSSTVTLKNGIESMLMHYIEE 273
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F+DG++
Sbjct: 211 MIKELLETRIRPAIQEDGGDIEFRGFEDGIV 241
>gi|402496873|ref|YP_006556133.1| NifU family protein [Wolbachia endosymbiont of Onchocerca ochengi]
gi|398650146|emb|CCF78316.1| NifU family protein [Wolbachia endosymbiont of Onchocerca ochengi]
Length = 194
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 105/158 (66%), Gaps = 6/158 (3%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G+T+DF + S L LFRIE V VFFGHDFI+VTK DD ++W LK E+ TIM
Sbjct: 30 GETVDFSSANETKNSKLAANLFRIEHVIRVFFGHDFISVTKSDD-INWNTLKVEVLTTIM 88
Query: 95 DFFSSGLPVLTDAQPSSDTVIHED-----DDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
D F+SG L + + ++ E+ D E V I+EL+++ I+P V +DGGDI+F
Sbjct: 89 DHFASGGKALNREGTNDNDILEEEFFDKSDTEIVSRIRELMESYIKPAVVQDGGDIKFRG 148
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++ G+V +++QG+C+ CPS+ +TLK G+QNML ++IPE
Sbjct: 149 YKNGIVYVELQGACSGCPSATITLKQGIQNMLCYHIPE 186
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+EL+++ I+P V +DGGDI+F +++G++
Sbjct: 125 IRELMESYIKPAVVQDGGDIKFRGYKNGIV 154
>gi|226292348|gb|EEH47768.1| HIRA interacting protein [Paracoccidioides brasiliensis Pb18]
Length = 317
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 104/155 (67%), Gaps = 10/155 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
Y SPL L ++GV +VF+G DFIT+TK D +W +KPE+F+ I + ++G P++T
Sbjct: 126 YPSPLASKLLNVDGVSAVFYGPDFITITKAGD-ANWAHIKPEVFSLITEAVTAGDPIVTI 184
Query: 106 -------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
AQ +EDDDE V MIKELL+TRIRP +QEDGGDI+F F+ G+V LK
Sbjct: 185 SEAGAGSKAQEEDSLSYNEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVNLK 244
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLN 193
++G+C +C SS VTLKNG+++ML YI E G+N
Sbjct: 245 LRGACRTCDSSTVTLKNGIESMLMHYIEEVK-GVN 278
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F+DG++
Sbjct: 211 MIKELLETRIRPAIQEDGGDIEFRGFEDGIV 241
>gi|84515908|ref|ZP_01003269.1| nifU domain protein [Loktanella vestfoldensis SKA53]
gi|84510350|gb|EAQ06806.1| nifU domain protein [Loktanella vestfoldensis SKA53]
Length = 187
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 101/162 (62%), Gaps = 9/162 (5%)
Query: 34 PGQ------TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ T DFP +AA SPL + +F GV VFFG DF+TVTK D +W +KP
Sbjct: 18 PGQNVLEVGTADFPNAEAAQHSPLAQRIFAAGGVSGVFFGIDFVTVTKADG-AEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLT-DAQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDI 145
I IM+ + SG V+ D +P S H +D + V IKELLDTR+RP V +DGGDI
Sbjct: 77 GILGAIMEHYQSGQSVMAADHKPVSGHAEHSGEDGDIVTQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F G+V L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 TFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 178
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F G++
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFDRGIV 146
>gi|328872467|gb|EGG20834.1| NIF system FeS cluster assembly domain-containing protein
[Dictyostelium fasciculatum]
Length = 313
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/154 (46%), Positives = 112/154 (72%), Gaps = 5/154 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DFP +++ SPL +F+++GV VFFG FI+V K + +W +LKP+++ I++F
Sbjct: 130 TVDFPDFKSSQISPLANAIFKLDGVNRVFFGPSFISVNKFTE-TEWSILKPQVYGAIINF 188
Query: 97 FSSGLPVLTDAQPSS---DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
+ SG P+L + +PS+ DT+I +DDE V MIKEL++TRIRPT+ +DGG+IQ++ F+ G
Sbjct: 189 YHSGQPLLLE-KPSAENNDTLILPEDDEVVAMIKELIETRIRPTLLDDGGNIQYLGFKDG 247
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+V +K+QG+C+SC SS TLK G++ ML +I E
Sbjct: 248 IVLVKLQGTCSSCSSSQATLKGGIERMLMHWISE 281
Score = 49.7 bits (117), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 29/31 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKEL++TRIRPT+ +DGG+IQ++ F+DG++
Sbjct: 219 MIKELIETRIRPTLLDDGGNIQYLGFKDGIV 249
>gi|424897994|ref|ZP_18321568.1| thioredoxin-like protein [Rhizobium leguminosarum bv. trifolii
WSM2297]
gi|393182221|gb|EJC82260.1| thioredoxin-like protein [Rhizobium leguminosarum bv. trifolii
WSM2297]
Length = 188
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K DD +W+ LKP I +IM+
Sbjct: 27 TAEFRSVEEAEASPLAARLFEIPGVTGVYFGYDFISVSK--DDAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDVDAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG--VLEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELL+TR+RP V +DGGDI F F+DG L G P+ A + LL
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCAGCPSSTATLKHGVQNLL 175
>gi|86356038|ref|YP_467930.1| nitrogen fixation protein [Rhizobium etli CFN 42]
gi|86280140|gb|ABC89203.1| nitrogen fixation protein [Rhizobium etli CFN 42]
Length = 188
Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 102/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K D+ +W+ LKP I +IM+
Sbjct: 27 TAEFRSAEEAEASPLAARLFDIPGVTGVYFGYDFISVSK--DNAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDVDAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELL+TR+RP V +DGGDI F F+DG
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDG 147
>gi|393769116|ref|ZP_10357644.1| Scaffold protein Nfu/NifU [Methylobacterium sp. GXF4]
gi|392725357|gb|EIZ82694.1| Scaffold protein Nfu/NifU [Methylobacterium sp. GXF4]
Length = 188
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 74/168 (44%), Positives = 104/168 (61%), Gaps = 4/168 (2%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + P T + +AA SPL LF + GV V+FGHDF++VTK +D +W
Sbjct: 14 LKFLPGRVVLPESTFEARDVEAANRSPLASALFAVPGVAGVYFGHDFVSVTKAEDGSEWA 73
Query: 84 LLKPEIFATIMDFFSSGLPVLT----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
+KP + IM+ F SG PV+ D Q D E D +TV IK+LL+TR+RP V
Sbjct: 74 QVKPAVLGAIMEHFQSGAPVMAEGGLDDQDGEDEFYDEADHDTVVTIKDLLETRVRPAVA 133
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI F ++ GVV L+M+G+C+ CPSS TL++GVQN+ + ++PE
Sbjct: 134 GDGGDITFRGYKEGVVYLEMKGACSGCPSSTATLRHGVQNLFRHFLPE 181
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
IK+LL+TR+RP V DGGDI F +++GV LE G P+ A
Sbjct: 120 IKDLLETRVRPAVAGDGGDITFRGYKEGVVYLEMKGACSGCPSSTA 165
>gi|319403933|emb|CBI77521.1| NifU-related protein [Bartonella rochalimae ATCC BAA-1498]
Length = 190
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/166 (46%), Positives = 107/166 (64%), Gaps = 4/166 (2%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQ-AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
+ F G + P T++F + AA SPL LF I +KSVF G+DFIT+TK D + W
Sbjct: 14 LKFLPGRIVLPQGTLEFHNREEAAKNSPLAAKLFNIPNIKSVFLGYDFITITKNDGE--W 71
Query: 83 KLLKPEIFATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQED 141
+ LKP I TIM++F S PV+T +A + E D + V +IKELL+TR+RP V D
Sbjct: 72 QHLKPAILGTIMEYFLSNDPVITTEANLPNKEFFDEKDTDIVVVIKELLETRVRPAVAND 131
Query: 142 GGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GGDI F F+ G+V L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 132 GGDITFCGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHFIPE 177
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IKELL+TR+RP V DGGDI F F++G++
Sbjct: 115 VIKELLETRVRPAVANDGGDITFCGFENGIV 145
>gi|403159233|ref|XP_003319869.2| Fe/S biogenesis protein NfuA [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168008|gb|EFP75450.2| Fe/S biogenesis protein NfuA [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 294
Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 106/157 (67%), Gaps = 9/157 (5%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F G SPL + L +EGVKSVFFG DFI++ K+ + V W +KPEI++ +M+FFS
Sbjct: 104 EFLKGDDTRSSPLARSLLSVEGVKSVFFGPDFISINKESE-VGWPTMKPEIYSLLMEFFS 162
Query: 99 -SGLPVLTDAQPSS-----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-- 150
S PV+ + DT IH+DD E V MIKELLDTR+RP +QEDGGD+++ F
Sbjct: 163 ASDRPVVQEGPIEEESGPLDTRIHDDDSEVVAMIKELLDTRVRPAIQEDGGDLEYKGFNE 222
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ GVV+L ++GSC C SS VTLK+G++ ML Y+PE
Sbjct: 223 ETGVVQLMLKGSCRGCDSSAVTLKSGIERMLMHYVPE 259
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELLDTR+RP +QEDGGD+++ F +
Sbjct: 195 MIKELLDTRVRPAIQEDGGDLEYKGFNE 222
>gi|389751042|gb|EIM92115.1| HIRA-interacting protein 5 [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 152 bits (384), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 82/171 (47%), Positives = 112/171 (65%), Gaps = 9/171 (5%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV + +F ++A SPL L IEGVK+VF+G DF+TV+K D + W
Sbjct: 85 LKFIPGVTVMESGSAEFLDTRSALTSPLAIRLMGIEGVKTVFYGPDFVTVSK-DSENPWS 143
Query: 84 LLKPEIFATIMDFFSSGLPVLT------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPT 137
+LKPEI++ +M+FFSSG P+ +A P DT I + D +TV MIKELLDTR+RP
Sbjct: 144 VLKPEIYSILMEFFSSGQPLFRSEEDRENAGPQ-DTRILDTDTDTVAMIKELLDTRVRPA 202
Query: 138 VQEDGGDIQFISFQ-GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ EDGGDI++ F G+V++K++GSC C SS VTLK G++ ML YIPE
Sbjct: 203 IMEDGGDIEYRGFTDDGLVQVKLKGSCRGCSSSTVTLKTGIERMLMHYIPE 253
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELLDTR+RP + EDGGDI++ F D
Sbjct: 190 MIKELLDTRVRPAIMEDGGDIEYRGFTD 217
>gi|77462766|ref|YP_352270.1| nitrogen-fixing NifU [Rhodobacter sphaeroides 2.4.1]
gi|77387184|gb|ABA78369.1| Nitrogen-fixing NifU [Rhodobacter sphaeroides 2.4.1]
Length = 186
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/140 (52%), Positives = 93/140 (66%), Gaps = 2/140 (1%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL + +F GV +VFFG DF+ VTK D+ V W +KP I IM+ + SG PVL Q
Sbjct: 39 SPLARRIFAAGGVSAVFFGTDFVAVTKADE-VAWDHIKPAILGAIMEHYQSGAPVLEGEQ 97
Query: 109 PSSDTVIHEDDDE-TVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCP 167
+S H+ DE V+ IKELLDTR+RP V +DGGDI F F G+V L MQG+C CP
Sbjct: 98 AASGHASHDGPDEDVVRQIKELLDTRVRPAVAQDGGDITFHGFDRGIVYLHMQGACAGCP 157
Query: 168 SSVVTLKNGVQNMLQFYIPE 187
SS +TLK G++N+L+ YIPE
Sbjct: 158 SSTLTLKMGIENLLRHYIPE 177
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F G++
Sbjct: 116 IKELLDTRVRPAVAQDGGDITFHGFDRGIV 145
>gi|212540196|ref|XP_002150253.1| NifU-related protein [Talaromyces marneffei ATCC 18224]
gi|210067552|gb|EEA21644.1| NifU-related protein [Talaromyces marneffei ATCC 18224]
Length = 285
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/154 (49%), Positives = 105/154 (68%), Gaps = 13/154 (8%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL L IEG+ SVF+G DFITVTK DV+W +KPE+F+ I + +SG P++
Sbjct: 125 HPSPLAAKLLNIEGISSVFYGPDFITVTK-SSDVNWAHVKPEVFSLITEVVTSGEPIVNT 183
Query: 107 AQPSS-----------DTV-IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
+ +S DT+ +E+DDE V MIKELL+TRIRP +QEDGGDI+F F+ G+
Sbjct: 184 VEHTSGAQDAQEGGGEDTLGYNEEDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFENGI 243
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
V LK++G+C +C SS VTLKNG+++ML Y+ T
Sbjct: 244 VLLKLRGACRTCDSSTVTLKNGIESMLMHYVSST 277
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F++G++
Sbjct: 214 MIKELLETRIRPAIQEDGGDIEFRGFENGIV 244
>gi|145505407|ref|XP_001438670.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405842|emb|CAK71273.1| unnamed protein product [Paramecium tetraurelia]
Length = 207
Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 108/160 (67%), Gaps = 9/160 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + A CSPL + LF I+GV VF+G D+I++ K+++ W+ +KP+IF IM+
Sbjct: 37 TYDFTRPREAKCSPLAQKLFLIDGVTRVFYGKDYISIAKKEES-RWEEIKPQIFEHIMEH 95
Query: 97 F---SSGLP---VLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
+ S G ++ Q + DT I+EDD E VQ+IKE++DTRIRPTVQEDGGDI F F
Sbjct: 96 YQLDSDGQEKKLIIDGYQENQDTQINEDDSEVVQLIKEIIDTRIRPTVQEDGGDIVFRDF 155
Query: 151 --QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
+ G+V+L M+GSC CPSS VTLKNG++ ML Y+ E
Sbjct: 156 DEKSGIVQLYMKGSCAGCPSSSVTLKNGIERMLCHYVAEV 195
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 30/48 (62%), Gaps = 4/48 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYC 48
+IKE++DTRIRPTVQEDGGDI F F E+ G + G A C
Sbjct: 130 LIKEIIDTRIRPTVQEDGGDIVFRDFD----EKSGIVQLYMKGSCAGC 173
>gi|449550288|gb|EMD41252.1| hypothetical protein CERSUDRAFT_78915 [Ceriporiopsis subvermispora
B]
Length = 226
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 111/165 (67%), Gaps = 9/165 (5%)
Query: 29 GVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPE 88
V+EE + +F ++A SPL L +EGV ++F+G DF+TV+K D D W ++KPE
Sbjct: 21 AVMEEG--SAEFLDAKSALKSPLALRLLGVEGVTAIFYGPDFVTVSK-DPDTAWAVIKPE 77
Query: 89 IFATIMDFFSSGLPVLT-----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGG 143
+++ +M+FFSSG P+ ++ DT I + D ETV MIKELLDTR+RP +QEDGG
Sbjct: 78 VYSILMEFFSSGQPLFRSEEDRESAGPQDTRILDTDSETVAMIKELLDTRVRPAIQEDGG 137
Query: 144 DIQFISFQG-GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI++ F G+V+L ++GSC C SS VTLK+G++ ML YIPE
Sbjct: 138 DIEYRGFTDEGIVQLMLKGSCRGCDSSTVTLKSGIERMLTHYIPE 182
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELLDTR+RP +QEDGGDI++ F D
Sbjct: 119 MIKELLDTRVRPAIQEDGGDIEYRGFTD 146
>gi|426201635|gb|EKV51558.1| hypothetical protein AGABI2DRAFT_133221 [Agaricus bisporus var.
bisporus H97]
Length = 221
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/157 (50%), Positives = 105/157 (66%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F ++A SPL LF +EGV VF+G DF+TV+K D + W ++KPEI+A +M+
Sbjct: 27 TAEFLDTRSALASPLAIRLFGVEGVNGVFYGPDFVTVSK-DSENTWAVVKPEIYAILMEH 85
Query: 97 FSSGLPVLT-----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
FSSG + +A D I E D +TV MIKELL+TR+RP + EDGGDI+F F
Sbjct: 86 FSSGQALFRSEEDREAAGPQDLKILETDSDTVAMIKELLETRVRPAIMEDGGDIEFRGFD 145
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ GVVKLK++GSC C SS VTLK+G++ ML YIPE
Sbjct: 146 EDGVVKLKLKGSCRGCSSSTVTLKSGIERMLTHYIPE 182
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF-QDGVLE 32
MIKELL+TR+RP + EDGGDI+F F +DGV++
Sbjct: 119 MIKELLETRVRPAIMEDGGDIEFRGFDEDGVVK 151
>gi|300024980|ref|YP_003757591.1| Scaffold protein Nfu/NifU [Hyphomicrobium denitrificans ATCC 51888]
gi|299526801|gb|ADJ25270.1| Scaffold protein Nfu/NifU [Hyphomicrobium denitrificans ATCC 51888]
Length = 184
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 82/172 (47%), Positives = 111/172 (64%), Gaps = 9/172 (5%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++FI +D VL G T DF T A SPL LF I+GV VF G DFI+VTK +V
Sbjct: 14 LKFIPGRD-VLA--GGTADFRTRNEAVASPLATRLFAIDGVDGVFLGSDFISVTK--GNV 68
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHE---DDDETVQMIKELLDTRIRPT 137
+W+ LKP + IM+ + SG PV +D + S+D +D+ TV IKELL+TR+RP
Sbjct: 69 EWQHLKPMVLGAIMEHYMSGAPV-SDEEDSNDEGAESYDPEDEATVTTIKELLETRVRPA 127
Query: 138 VQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
V +DGGDI F F+ GVV L M+G+C+ CPSS TL+NG++N+L+ + PE T
Sbjct: 128 VAQDGGDITFSGFRDGVVYLHMRGACSGCPSSTATLRNGIENLLKHFCPEVT 179
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F F+DGV+
Sbjct: 116 IKELLETRVRPAVAQDGGDITFSGFRDGVV 145
>gi|384261560|ref|YP_005416746.1| Nitrogen-fixing NifU-like [Rhodospirillum photometricum DSM 122]
gi|378402660|emb|CCG07776.1| Nitrogen-fixing NifU-like [Rhodospirillum photometricum DSM 122]
Length = 213
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 102/162 (62%), Gaps = 10/162 (6%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PG+ + DF A SPL + LF IEGV VF G DF+TVTK + + DW +LKP
Sbjct: 44 PGRAVLPQGGRDFADAAQARVSPLAQRLFEIEGVSGVFLGTDFVTVTKAEAE-DWTVLKP 102
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSD---TVIHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
+ ++MD F++ PVL D S D + E D E V+ ++ELL+TR+RP V +DGGD
Sbjct: 103 LVLGSLMDHFTANAPVLADDAGSVDDAEEALSEADREVVRQVRELLETRVRPVVAQDGGD 162
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
I F +++ GVV L M+GSC CPSS TLK GV+ +L+ YIP
Sbjct: 163 IVFHAYREGVVYLYMRGSCAGCPSSTATLKRGVETLLRHYIP 204
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 26/30 (86%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
++ELL+TR+RP V +DGGDI F ++++GV+
Sbjct: 144 VRELLETRVRPVVAQDGGDIVFHAYREGVV 173
>gi|254503238|ref|ZP_05115389.1| Scaffold protein Nfu/NifU N terminal domain protein [Labrenzia
alexandrii DFL-11]
gi|222439309|gb|EEE45988.1| Scaffold protein Nfu/NifU N terminal domain protein [Labrenzia
alexandrii DFL-11]
Length = 185
Score = 152 bits (383), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 104/167 (62%), Gaps = 5/167 (2%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + P T DF + A SPL + LF + GV +VFFGHDF+TVTK DD DW+
Sbjct: 14 LKFLPGRVVLPEGTYDFRSKADAGASPLAEKLFDVPGVAAVFFGHDFVTVTK--DDTDWQ 71
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDD---DETVQMIKELLDTRIRPTVQE 140
+KP I IM+ F SG PV+ + + ETV IKELL+TR+RP V +
Sbjct: 72 HMKPAILGVIMEQFMSGQPVMNAGESEDIEEGEFFEEGDQETVATIKELLETRVRPAVAQ 131
Query: 141 DGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI F F+ G+V L M+G+C CPSS TL++G+QN+L+ ++PE
Sbjct: 132 DGGDITFKGFKEGIVYLSMRGACAGCPSSTATLQHGIQNLLRHFVPE 178
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F F++G++
Sbjct: 117 IKELLETRVRPAVAQDGGDITFKGFKEGIV 146
>gi|407777261|ref|ZP_11124531.1| nitrogen-fixing NifU-like protein [Nitratireductor pacificus
pht-3B]
gi|407300961|gb|EKF20083.1| nitrogen-fixing NifU-like protein [Nitratireductor pacificus
pht-3B]
Length = 190
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 80/157 (50%), Positives = 102/157 (64%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAA-YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
T DF +AA SPL LF ++GV VFFG+DFITVTK D DW+ LKP I TIM+
Sbjct: 27 TADFRDAEAAGAASPLAGRLFEVQGVTGVFFGYDFITVTK-DGGPDWQHLKPAILGTIME 85
Query: 96 FFSSGLPVLTDAQ---PSSDTVIHED--DDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ A P+S+ D D+E V IKELL+TR+RP V +DGGDI F +
Sbjct: 86 HFMSGQPVMASAGNTVPASEDGEFYDAADEEIVSTIKELLETRVRPAVAQDGGDITFRGY 145
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+G+C CPSS TLK+G+QN+L ++PE
Sbjct: 146 EKGTVFLHMKGACAGCPSSTATLKHGIQNLLHHFVPE 182
Score = 42.4 bits (98), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLLFR 57
IKELL+TR+RP V +DGGDI F ++ G L G P+ A + LL
Sbjct: 121 IKELLETRVRPAVAQDGGDITFRGYEKGTVFLHMKGACAGCPSSTATLKHGIQNLLHH 178
>gi|118590483|ref|ZP_01547885.1| nitrogen-fixing NifU-like protein [Stappia aggregata IAM 12614]
gi|118436946|gb|EAV43585.1| nitrogen-fixing NifU-like protein [Stappia aggregata IAM 12614]
Length = 185
Score = 152 bits (383), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 106/167 (63%), Gaps = 5/167 (2%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + P T DF + A SPL + LF + GV +VFFGHDF+TVTK D+ DW+
Sbjct: 14 LKFLPGRVVLPEGTYDFRSKADAGVSPLAQKLFDVPGVVAVFFGHDFVTVTK--DETDWQ 71
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSS---DTVIHEDDDETVQMIKELLDTRIRPTVQE 140
+KP I IM+ F SG PV+ ++ + D +TV IKELL+TR+RP V +
Sbjct: 72 HMKPAILGVIMEQFMSGQPVMATSEAENIEEGEFFEAGDADTVSTIKELLETRVRPAVAQ 131
Query: 141 DGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI F F+ G+V L M+G+C CPSS TL++G+QN+L+ ++PE
Sbjct: 132 DGGDITFKGFKEGIVYLSMRGACAGCPSSTATLQHGIQNLLRHFVPE 178
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F F++G++
Sbjct: 117 IKELLETRVRPAVAQDGGDITFKGFKEGIV 146
>gi|393218959|gb|EJD04447.1| HIRA-interacting protein 5 [Fomitiporia mediterranea MF3/22]
Length = 298
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ +F ++A SPL L ++GV++VF+G DF+TV+K+ D V W ++KPE+++ +M+
Sbjct: 96 SAEFLDTRSALASPLALRLMGVDGVRAVFYGPDFVTVSKEPD-VSWSVIKPEVYSLLMEH 154
Query: 97 FSSGLPVLT-----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
FSSG P+ DA DT I + D +TV MIKELL TR+RP + EDGGDI++ F
Sbjct: 155 FSSGQPLFRSDEDRDAAGPQDTRILDTDSDTVAMIKELLQTRVRPAIMEDGGDIEYCEFS 214
Query: 152 -GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLK++GSC C SS VTLK G++ M+ YIPE
Sbjct: 215 DDGIVKLKLKGSCRGCSSSTVTLKTGIERMMMHYIPE 251
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 22/28 (78%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL TR+RP + EDGGDI++ F D
Sbjct: 188 MIKELLQTRVRPAIMEDGGDIEYCEFSD 215
>gi|254295433|ref|YP_003061456.1| Scaffold protein Nfu/NifU [Hirschia baltica ATCC 49814]
gi|254043964|gb|ACT60759.1| Scaffold protein Nfu/NifU [Hirschia baltica ATCC 49814]
Length = 190
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 106/171 (61%), Gaps = 6/171 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G P +F + A SPL LF ++GVK+VF G DF+ +TK + DW
Sbjct: 14 LKFLPGREVSPKTPYEFLNEKEAGSSPLAAFLFTLKGVKTVFLGADFVALTKTQE-TDWA 72
Query: 84 LLKPEIFATIMDFFSSGLPVL---TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
+LKP+ A IMD F SG+PV+ +D P + + ++ E V IKEL++TR+RP V
Sbjct: 73 ILKPQALAAIMDHFVSGMPVMADYSDPAPVEEVIYEGENAEIVAEIKELIETRVRPAVAN 132
Query: 141 DGGDIQFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
DGGDI F F GVV L+M+G+C CPSS +TLK+G++NML+ Y+PE T
Sbjct: 133 DGGDIIFEKFDVDTGVVTLQMRGACAGCPSSTMTLKSGIENMLRHYVPEVT 183
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 19/25 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
IKEL++TR+RP V DGGDI F F
Sbjct: 118 IKELIETRVRPAVANDGGDIIFEKF 142
>gi|154245767|ref|YP_001416725.1| scaffold protein Nfu/NifU [Xanthobacter autotrophicus Py2]
gi|154159852|gb|ABS67068.1| Scaffold protein Nfu/NifU [Xanthobacter autotrophicus Py2]
Length = 186
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 100/157 (63%), Gaps = 6/157 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+D + A SPL + LF + GV +VF G DF+TVTK + +W +KP I IM+
Sbjct: 27 TLDLRSHDDADLSPLAQRLFDVRGVAAVFLGSDFVTVTKAE--AEWPQIKPAILGAIMEH 84
Query: 97 FSSGLPVLTDA-QPS---SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
F SG PVL+D +P +D D E V IKELLDTR+RP V DGGDI F F+
Sbjct: 85 FMSGAPVLSDGVKPEVADADEFYEAKDAEIVATIKELLDTRVRPAVANDGGDITFRGFKD 144
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
G+V L M+GSC+ CPSS TLKNG++N+L+ ++PE T
Sbjct: 145 GIVFLNMKGSCSGCPSSTATLKNGIENLLKHFVPEVT 181
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELLDTR+RP V DGGDI F F+DG+ L G P+ A + + LL
Sbjct: 118 IKELLDTRVRPAVANDGGDITFRGFKDGIVFLNMKGSCSGCPSSTATLKNGIENLL 173
>gi|330991171|ref|ZP_08315124.1| NFU1 iron-sulfur cluster scaffold-like protein [Gluconacetobacter
sp. SXCC-1]
gi|329761757|gb|EGG78248.1| NFU1 iron-sulfur cluster scaffold-like protein [Gluconacetobacter
sp. SXCC-1]
Length = 187
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 107/155 (69%), Gaps = 4/155 (2%)
Query: 35 GQTIDFPT-GQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
G T DF + A S L +LLF ++GV VFFG DF+ VT+ D V+W+ L+P++ A +
Sbjct: 26 GATADFISPDSVAGRSRLAELLFDLDGVARVFFGADFVAVTRSDS-VEWEGLRPQVLAVL 84
Query: 94 MDFFSSGLPVL-TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
D+ ++G V+ +DAQ D +I D+E VQ IKELLDTR+RP V DGGDI F ++
Sbjct: 85 ADYLATGQAVVESDAQVVED-LIAPGDEEIVQQIKELLDTRVRPAVAGDGGDIVFRGYRD 143
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVV+L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 144 GVVRLTMQGACSGCPSSRATLKHGVENMLRHYVPE 178
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELLDTR+RP V DGGDI F ++DGV+
Sbjct: 117 IKELLDTRVRPAVAGDGGDIVFRGYRDGVVR 147
>gi|409435795|ref|ZP_11263003.1| putative iron-sulfur cluster scaffold protein NifU/NFU-related
[Rhizobium mesoamericanum STM3625]
gi|408752553|emb|CCM74150.1| putative iron-sulfur cluster scaffold protein NifU/NFU-related
[Rhizobium mesoamericanum STM3625]
Length = 188
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 102/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + A SPL LF I GV V+FG+DFI+V+K++ +W+ LKP I +IM+
Sbjct: 27 TAEFRSADEAQASPLAARLFEIPGVTGVYFGYDFISVSKEN--AEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTV------IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA S+ + E D+ V IKELLDTR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASFLSEDLDAGGEFFDEADESIVLTIKELLDTRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFVPE 181
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELLDTR+RP V +DGGDI F F+DG
Sbjct: 120 IKELLDTRVRPAVAQDGGDITFRGFKDG 147
>gi|295687469|ref|YP_003591162.1| Scaffold protein Nfu/NifU [Caulobacter segnis ATCC 21756]
gi|295429372|gb|ADG08544.1| Scaffold protein Nfu/NifU [Caulobacter segnis ATCC 21756]
Length = 191
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 82/157 (52%), Positives = 99/157 (63%), Gaps = 7/157 (4%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F T + SPL K LF + V VFFG DF+TVTK + W LK I A IMD F+
Sbjct: 29 EFRTAEEGEASPLAKALFDLGDVTRVFFGPDFLTVTK-GEAAQWPHLKAPILAAIMDHFT 87
Query: 99 SGLPVLTDAQPSS----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
SG P+L DA+P D V E+ + V IKELLDTRIRP V +DGGDI F F Q
Sbjct: 88 SGRPLLLDAEPGGGHDEDGVYDEEASQIVAEIKELLDTRIRPAVAQDGGDIVFSRFEPQT 147
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
GVV L M+G+C+ CPSS TLK GV+NML+ Y+PE T
Sbjct: 148 GVVWLHMRGACSGCPSSSATLKAGVENMLKHYVPEVT 184
Score = 42.4 bits (98), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 21/26 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQ 27
IKELLDTRIRP V +DGGDI F F+
Sbjct: 119 IKELLDTRIRPAVAQDGGDIVFSRFE 144
>gi|406924334|gb|EKD61156.1| hypothetical protein ACD_54C00370G0002 [uncultured bacterium]
Length = 185
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 100/160 (62%), Gaps = 7/160 (4%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ +AA SPL +F V VFFG DF+TVTK + +W+ +KP
Sbjct: 18 PGQTVLEMGTADFPSAEAAQKSPLATRIFATGQVTGVFFGTDFVTVTKAEA-AEWQHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
I IM+ F SG PV+ ++ D + V+ IKELLDTR+RP V +DGGDI F
Sbjct: 77 AILGAIMEHFQSGAPVMEGEGQAAHMAHDGPDGDIVKQIKELLDTRVRPAVAQDGGDITF 136
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F G+V L M+G+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 HGFDRGIVYLHMKGACAGCPSSTLTLKMGIENLLRHYIPE 176
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F G++
Sbjct: 115 IKELLDTRVRPAVAQDGGDITFHGFDRGIV 144
>gi|238486392|ref|XP_002374434.1| NifU-related protein [Aspergillus flavus NRRL3357]
gi|317144282|ref|XP_003189583.1| nifU-related protein [Aspergillus oryzae RIB40]
gi|220699313|gb|EED55652.1| NifU-related protein [Aspergillus flavus NRRL3357]
Length = 329
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 78/170 (45%), Positives = 103/170 (60%), Gaps = 22/170 (12%)
Query: 39 DFPTGQAAYCSP-----------LGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
DFPT Y SP L LF ++GV S+FFG +FITVTK D +W +KP
Sbjct: 113 DFPTSFLEYLSPRSTLAPPHPSPLAANLFNVDGVTSIFFGPEFITVTKASD-ANWAHIKP 171
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTV----------IHEDDDETVQMIKELLDTRIRPT 137
EIF+ I +SG P++ S + +E+DDE V MIKELL+TRIRP
Sbjct: 172 EIFSLITQAVTSGEPIVNTVAKSGENAQEGGEEESLSYNEEDDEVVSMIKELLETRIRPA 231
Query: 138 VQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+QEDGGDI+ F+ G+V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 232 IQEDGGDIELRGFENGIVMLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 281
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+ F++G++
Sbjct: 219 MIKELLETRIRPAIQEDGGDIELRGFENGIV 249
>gi|121702857|ref|XP_001269693.1| NifU-related protein [Aspergillus clavatus NRRL 1]
gi|119397836|gb|EAW08267.1| NifU-related protein [Aspergillus clavatus NRRL 1]
Length = 320
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 100/151 (66%), Gaps = 11/151 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL LF +EGV SVF+G DFITVTK D +W +KPE+F+ I +SG ++
Sbjct: 123 HPSPLAANLFNVEGVTSVFYGPDFITVTK-SSDANWAHIKPEVFSLITQAVTSGETIVNT 181
Query: 107 AQPSSDTV----------IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+ S + +E+DDE + MIKELL+TRIRP +QEDGGDI+ F+ G+VK
Sbjct: 182 VEKSGEHAQEGGEQDSLSFNEEDDEVIGMIKELLETRIRPAIQEDGGDIELRGFENGIVK 241
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 242 LKLRGACRTCDSSTVTLKNGIESMLMHYIEE 272
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRP +QEDGGDI+ F++G+++
Sbjct: 210 MIKELLETRIRPAIQEDGGDIELRGFENGIVK 241
>gi|299755866|ref|XP_001828936.2| NifU-like protein c [Coprinopsis cinerea okayama7#130]
gi|298411416|gb|EAU92943.2| NifU-like protein c [Coprinopsis cinerea okayama7#130]
Length = 291
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 109/165 (66%), Gaps = 10/165 (6%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
V+EE + +F ++A SPL L IEG+ VF+G DF+TV+K D W ++KPE+
Sbjct: 87 VMEE--GSAEFLDTRSALASPLALRLMGIEGITGVFYGPDFVTVSKSSDH-PWAVVKPEV 143
Query: 90 FATIMDFFSSGLPVLT-----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
+A +M+FFSSG P+ +A DT I + D ETV MIKELL+TR+RP + EDGGD
Sbjct: 144 YALLMEFFSSGQPLFRSEEDREAAGPQDTRILDTDSETVAMIKELLETRVRPAIMEDGGD 203
Query: 145 IQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
I++ F G+V++K++GSC C SS VTLK+G++ ML Y+PE
Sbjct: 204 IEYRGFDENDGIVRVKLKGSCRGCESSSVTLKSGIERMLMHYVPE 248
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%), Gaps = 2/33 (6%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGVL 31
MIKELL+TR+RP + EDGGDI++ F DG++
Sbjct: 184 MIKELLETRVRPAIMEDGGDIEYRGFDENDGIV 216
>gi|222084688|ref|YP_002543217.1| nitrogen fixation protein [Agrobacterium radiobacter K84]
gi|398379626|ref|ZP_10537746.1| thioredoxin-like protein [Rhizobium sp. AP16]
gi|221722136|gb|ACM25292.1| nitrogen fixation protein [Agrobacterium radiobacter K84]
gi|397722258|gb|EJK82802.1| thioredoxin-like protein [Rhizobium sp. AP16]
Length = 188
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + A SPL LF I GV V+FG+DFI+V+K DD +W+ LKP I +IM+
Sbjct: 27 TAEFRSADEAEVSPLAARLFDIPGVSGVYFGYDFISVSK--DDQEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPV------LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV L++AQ +S E D V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGAASVLSEAQDASGEFFDEGDATIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC CPSS TLK+G+QN+L+ ++PE
Sbjct: 145 RDGKVYLNMKGSCAGCPSSTATLKHGIQNLLRHFVPE 181
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG--VLEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELL+TR+RP V +DGGDI F F+DG L G P+ A + LL
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFRDGKVYLNMKGSCAGCPSSTATLKHGIQNLL 175
>gi|407917719|gb|EKG11023.1| NIF system FeS cluster assembly NifU [Macrophomina phaseolina MS6]
Length = 385
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 100/148 (67%), Gaps = 10/148 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
Y SPL L ++GV SVFFG D+ITV+K D V W +KPEIF+ I ++ +SG P++
Sbjct: 188 YPSPLAAKLLNVDGVTSVFFGADYITVSK-DSSVPWAHVKPEIFSLISEYVASGQPMVNI 246
Query: 107 AQPSSDT---------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKL 157
Q S+ +EDDDE V MIKELL+TRIRP +Q+DGGDI+F FQ G+V L
Sbjct: 247 TQGQSEEGQESAEDSLAYNEDDDEIVGMIKELLETRIRPAIQDDGGDIEFRGFQDGIVML 306
Query: 158 KMQGSCTSCPSSVVTLKNGVQNMLQFYI 185
K++G+C +C SS VTLKNG++ ML Y+
Sbjct: 307 KLRGACRTCDSSTVTLKNGIEQMLVHYL 334
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +Q+DGGDI+F FQDG++
Sbjct: 274 MIKELLETRIRPAIQDDGGDIEFRGFQDGIV 304
>gi|254420655|ref|ZP_05034379.1| Scaffold protein Nfu/NifU N terminal [Brevundimonas sp. BAL3]
gi|196186832|gb|EDX81808.1| Scaffold protein Nfu/NifU N terminal [Brevundimonas sp. BAL3]
Length = 185
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/169 (48%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G P +D+ T AA SPL + LF +EGV VFFG D+++VT+Q+ DW
Sbjct: 14 LKFLPGREVSPLAVLDYRTIDAATASPLAEALFELEGVDGVFFGADYVSVTRQERGPDWS 73
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIH-EDDDETVQMIKELLDTRIRPTVQEDG 142
+K I IMD F SG P LT A S+T H EDD E V IK LLD+RIRP V +DG
Sbjct: 74 EMKAPILGVIMDHFVSGRP-LTVA--GSETETHAEDDSEIVAEIKALLDSRIRPAVAQDG 130
Query: 143 GDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
GDI F +F GV+ L+M+G+C+ CPSS TLK GV+ M++ Y+PE T
Sbjct: 131 GDILFDAFDEATGVLSLRMRGACSGCPSSSATLKAGVEQMMRHYVPEVT 179
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD--GVL 31
IK LLD+RIRP V +DGGDI F +F + GVL
Sbjct: 114 IKALLDSRIRPAVAQDGGDILFDAFDEATGVL 145
>gi|145507614|ref|XP_001439762.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406957|emb|CAK72365.1| unnamed protein product [Paramecium tetraurelia]
Length = 207
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/160 (46%), Positives = 104/160 (65%), Gaps = 9/160 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + A CSPL + LF I+GV VF+G D+I+++K +++ W+ LKP+IF IM+
Sbjct: 37 TYDFSRPREAKCSPLAQKLFMIDGVNRVFYGKDYISISK-NEESKWEELKPQIFEQIMEH 95
Query: 97 F------SSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
+ ++ + DT I E+D E +Q+IKE++DTRIRPTVQEDGGDI F F
Sbjct: 96 YQLDAEGKEKQLIIDGYSENQDTQIKEEDSEAIQLIKEIIDTRIRPTVQEDGGDIVFRDF 155
Query: 151 --QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
Q G+V L M+GSC CPSS +TLKNG++ ML Y+ E
Sbjct: 156 DEQNGIVHLYMKGSCAGCPSSSITLKNGIERMLCHYVAEV 195
Score = 46.6 bits (109), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 28/34 (82%), Gaps = 2/34 (5%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGVLE 32
+IKE++DTRIRPTVQEDGGDI F F Q+G++
Sbjct: 130 LIKEIIDTRIRPTVQEDGGDIVFRDFDEQNGIVH 163
>gi|398830544|ref|ZP_10588730.1| thioredoxin-like protein [Phyllobacterium sp. YR531]
gi|398213981|gb|EJN00565.1| thioredoxin-like protein [Phyllobacterium sp. YR531]
Length = 192
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 104/167 (62%), Gaps = 12/167 (7%)
Query: 30 VLEEPGQTIDFPTGQAA-YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPE 88
VLEE T DF AA SPL +F + GV VFFG+DF+TVTK D +W+ LKP
Sbjct: 22 VLEE--GTADFRDAAAAGEASPLAAKIFAVPGVSGVFFGYDFVTVTKTDAP-EWQHLKPA 78
Query: 89 IFATIMDFFSSGLPVLTDAQPSSDTVIHED--------DDETVQMIKELLDTRIRPTVQE 140
I IM+ F SG PV+ +A +D+ E D E V IKELL+TR+RP V +
Sbjct: 79 ILGAIMEHFMSGAPVMANATDIADSAQRETEGEFFDSADTEIVDTIKELLETRVRPAVAQ 138
Query: 141 DGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI F F+ G V L M+G+C+ CPSS TLK+G+QN+L+ ++PE
Sbjct: 139 DGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLKHFVPE 185
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F F++G +
Sbjct: 124 IKELLETRVRPAVAQDGGDITFRGFENGTV 153
>gi|409050888|gb|EKM60364.1| hypothetical protein PHACADRAFT_189498 [Phanerochaete carnosa
HHB-10118-sp]
Length = 218
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 107/157 (68%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ +F ++A+ SPL L +EGV VF+G DF+TV+K D + W ++KPE+++ +M+F
Sbjct: 27 SAEFLDTRSAFKSPLAIHLLGVEGVTGVFYGPDFVTVSK-DPETSWAVIKPEVYSNLMEF 85
Query: 97 FSSGLPVLTDAQPSS-----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
FSSG P+ + + DT I + D ETV MIKELLDTR+RP +QEDGGD+++ F
Sbjct: 86 FSSGQPLFRSEEDRAAAGPQDTRILDTDSETVAMIKELLDTRVRPAIQEDGGDLEYRDFT 145
Query: 152 G-GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V +K++GSC C SS VTLK+G++ ML YIPE
Sbjct: 146 DEGIVHVKLKGSCRGCDSSTVTLKSGIERMLMHYIPE 182
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELLDTR+RP +QEDGGD+++ F D
Sbjct: 119 MIKELLDTRVRPAIQEDGGDLEYRDFTD 146
>gi|90421987|ref|YP_530357.1| nitrogen-fixing NifU-like protein [Rhodopseudomonas palustris
BisB18]
gi|90104001|gb|ABD86038.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB18]
Length = 188
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 102/156 (65%), Gaps = 8/156 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F A SPL + +F + GV VF+G DF+TVTK DD DW+ LKP I IM+
Sbjct: 27 TMEFNDRATAARSPLAERIFEVPGVTGVFYGSDFVTVTK--DDSDWQHLKPSILGAIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTVIHED------DDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
+ SG P++ D + D +D D ETV MIK+L++TR+RP V DGGDI F F
Sbjct: 85 YMSGEPLMADGRVDGDEPSEDDEFFDKADAETVDMIKDLIETRVRPAVANDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
+ G+V LKMQG+C+ CPSS TL++G+QN+L+ ++P
Sbjct: 145 KDGIVYLKMQGACSGCPSSTATLQHGIQNLLKHFVP 180
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L++TR+RP V DGGDI F F+DG++
Sbjct: 119 MIKDLIETRVRPAVANDGGDITFRGFKDGIV 149
>gi|255726880|ref|XP_002548366.1| hypothetical protein CTRG_02663 [Candida tropicalis MYA-3404]
gi|240134290|gb|EER33845.1| hypothetical protein CTRG_02663 [Candida tropicalis MYA-3404]
Length = 261
Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/161 (49%), Positives = 111/161 (68%), Gaps = 7/161 (4%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
QT +F +G+ A CSPL LF I+G+KSV +G DFIT+ K +++ W LLKPEIF+ +
Sbjct: 57 NQTKEFLSGREAACSPLAVKLFSIDGIKSVMYGSDFITIEK-SENIAWPLLKPEIFSILT 115
Query: 95 DFFSSGLPVLTDAQP----SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
++ ++G P+L + + D EDDDE V MIKEL+ TRIRP +Q+DGGDI+FI F
Sbjct: 116 EYLTNGSPILLENDKNGIITDDMAFDEDDDEVVSMIKELIFTRIRPAIQDDGGDIEFIKF 175
Query: 151 Q--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+ G V LK++G+C SC SS VTLKNG+++ML+ YI E
Sbjct: 176 EPDNGTVYLKLKGACRSCDSSSVTLKNGIESMLKHYIEEVN 216
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQ 27
MIKEL+ TRIRP +Q+DGGDI+FI F+
Sbjct: 150 MIKELIFTRIRPAIQDDGGDIEFIKFE 176
>gi|408376875|ref|ZP_11174478.1| hypothetical protein QWE_04758 [Agrobacterium albertimagni AOL15]
gi|407748834|gb|EKF60347.1| hypothetical protein QWE_04758 [Agrobacterium albertimagni AOL15]
Length = 187
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 100/156 (64%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F +A SPL +F I GV VFFG+DF+TV+K D +W LKP I TIM+
Sbjct: 27 TAEFRDAGSASASPLAARIFAIPGVTGVFFGYDFVTVSK--DGPEWHHLKPAILGTIMEH 84
Query: 97 FSSGLPVL----TDAQPSSDTVIHEDDDET-VQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
F SG PV+ T AQ +D + DET V IKELL+TR+RP V +DGGDI F F+
Sbjct: 85 FMSGAPVMGTASTSAQTDTDEEFFDAGDETIVATIKELLETRVRPAVAQDGGDITFRGFK 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L M+GSC CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 DGKVFLNMKGSCAGCPSSTATLKHGVQNLLRHFVPE 180
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELL+TR+RP V +DGGDI F F+DG
Sbjct: 119 IKELLETRVRPAVAQDGGDITFRGFKDG 146
>gi|158426327|ref|YP_001527619.1| nitrogen-fixing protein [Azorhizobium caulinodans ORS 571]
gi|158333216|dbj|BAF90701.1| nitrogen-fixing protein [Azorhizobium caulinodans ORS 571]
Length = 186
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 99/155 (63%), Gaps = 6/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++ + A SPL + LF ++GV VF G DF+TVTK D D W +KP I IM+
Sbjct: 27 TLEARSPAEAGRSPLVQRLFEVKGVGGVFLGSDFVTVTKTDGD--WAHMKPAILGAIMEH 84
Query: 97 FSSGLPVLTDA----QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
F SG PVL D Q + +E D+E V IKEL++TR+RP V DGGDI F F+
Sbjct: 85 FMSGAPVLADGVAADQEDGEEFFNEADEEIVGTIKELIETRVRPAVAADGGDITFRGFRE 144
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVV L M+GSC+ CPSS TLKNG++N+L+ ++PE
Sbjct: 145 GVVYLNMKGSCSGCPSSTATLKNGIENLLRHFVPE 179
Score = 43.9 bits (102), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++TR+RP V DGGDI F F++GV+
Sbjct: 118 IKELIETRVRPAVAADGGDITFRGFREGVV 147
>gi|409083312|gb|EKM83669.1| hypothetical protein AGABI1DRAFT_81428 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 221
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 105/157 (66%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F ++A SPL LF +EGV VF+G DF+TV+K D + W ++KPEI+A +M+
Sbjct: 27 TAEFLDTRSALASPLAIRLFGVEGVNGVFYGPDFVTVSK-DSENTWAVVKPEIYAILMEH 85
Query: 97 FSSGLPVLT-----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
FSSG + +A D I + D +TV MIKELL+TR+RP + EDGGDI+F F
Sbjct: 86 FSSGQALFRSEEDREAAGPQDLKILDTDSDTVAMIKELLETRVRPAIMEDGGDIEFRGFD 145
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ GVVKLK++GSC C SS VTLK+G++ ML YIPE
Sbjct: 146 EDGVVKLKLKGSCRGCSSSTVTLKSGIERMLTHYIPE 182
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 28/33 (84%), Gaps = 1/33 (3%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF-QDGVLE 32
MIKELL+TR+RP + EDGGDI+F F +DGV++
Sbjct: 119 MIKELLETRVRPAIMEDGGDIEFRGFDEDGVVK 151
>gi|407972985|ref|ZP_11153898.1| nitrogen-fixing NifU-like protein [Nitratireductor indicus C115]
gi|407431756|gb|EKF44427.1| nitrogen-fixing NifU-like protein [Nitratireductor indicus C115]
Length = 190
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 84/164 (51%), Positives = 103/164 (62%), Gaps = 9/164 (5%)
Query: 30 VLEEPGQTIDFP-TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPE 88
VLEE T DF AA SPL LF + GV VFFG+DFITVTK D DW+ LKP
Sbjct: 22 VLEE--GTADFRDASTAADASPLASRLFEVPGVTGVFFGYDFITVTK-DGGPDWQHLKPA 78
Query: 89 IFATIMDFFSSGLPVLTDAQ---PSSDTVIHED--DDETVQMIKELLDTRIRPTVQEDGG 143
I IM+ F SG PV+ A P+SD D D+E V IKELL+TR+RP V +DGG
Sbjct: 79 ILGNIMEHFMSGQPVMAPAASGLPTSDDGEFYDAADEEIVSTIKELLETRVRPAVAQDGG 138
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI F ++ G V L M+G+C CPSS TLK+G+QN+L ++PE
Sbjct: 139 DITFRGYEKGTVFLHMKGACAGCPSSTATLKHGIQNLLHHFVPE 182
Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F ++ G +
Sbjct: 121 IKELLETRVRPAVAQDGGDITFRGYEKGTV 150
>gi|384214522|ref|YP_005605686.1| hypothetical protein BJ6T_08050 [Bradyrhizobium japonicum USDA 6]
gi|354953419|dbj|BAL06098.1| hypothetical protein BJ6T_08050 [Bradyrhizobium japonicum USDA 6]
Length = 189
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 106/160 (66%), Gaps = 9/160 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G ++F + ++A SPL + LF + GV VF+G DFITVTK + + W+ LKP I IM
Sbjct: 25 GSPMEFSSRESATRSPLAEKLFDVPGVTGVFYGSDFITVTKANGE--WQQLKPAILGAIM 82
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDD-------ETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ + SG P+L D SD + ++D+ ETV MIK+L++TR+RP V DGGDI F
Sbjct: 83 EHYMSGAPLLADGAAPSDAELDDEDEFFDEADAETVDMIKDLIETRVRPAVANDGGDITF 142
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V L M+G+C+ CPSS TL++G+QN+L+ ++P+
Sbjct: 143 RGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFVPD 182
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L++TR+RP V DGGDI F F+DG++
Sbjct: 120 MIKDLIETRVRPAVANDGGDITFRGFKDGIV 150
>gi|116250169|ref|YP_766007.1| nifU iron-sulfur cluster scaffold protein [Rhizobium leguminosarum
bv. viciae 3841]
gi|115254817|emb|CAK05891.1| putative nifU iron-sulphur cluster scaffold protein [Rhizobium
leguminosarum bv. viciae 3841]
Length = 188
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 101/157 (64%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K D+ DW+ LKP I +IM+
Sbjct: 27 TAEFRSTEEAQASPLAARLFEISGVTGVYFGYDFISVSK--DNADWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTVIHE------DDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ DA S+ + D+ V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGDASILSEDADADDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 KDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFVPE 181
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG--VLEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELL+TR+RP V +DGGDI F F+DG L G P+ A + LL
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGKVYLNMKGSCAGCPSSTATLKHGVQNLL 175
>gi|395326149|gb|EJF58562.1| HIRA-interacting protein 5 [Dichomitus squalens LYAD-421 SS1]
Length = 306
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 105/157 (66%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F ++A SPL L IEGV +VF+G DF+TV+K D D W ++KPE++A +M+
Sbjct: 106 TAEFTDIRSALKSPLAIRLMGIEGVTAVFYGPDFVTVSK-DPDTSWSVIKPEVYAMLMEH 164
Query: 97 FSSGLPVLT-----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
FSSG + +A DT I + D ETV MIKELL+TR+RP + EDGGDI++ F
Sbjct: 165 FSSGQALFRSDEDREAAGPQDTRILDTDSETVAMIKELLETRVRPAIMEDGGDIEYRGFT 224
Query: 152 -GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVV++K++GSC C SS VTLK+G++ ML YIPE
Sbjct: 225 DDGVVQVKLKGSCRGCSSSTVTLKSGIERMLMHYIPE 261
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQ-DGVLE 32
MIKELL+TR+RP + EDGGDI++ F DGV++
Sbjct: 198 MIKELLETRVRPAIMEDGGDIEYRGFTDDGVVQ 230
>gi|409401437|ref|ZP_11251222.1| nitrogen fixing thioredoxin-like protein NifU [Acidocella sp.
MX-AZ02]
gi|409129788|gb|EKM99611.1| nitrogen fixing thioredoxin-like protein NifU [Acidocella sp.
MX-AZ02]
Length = 184
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL + LF +EGV VF G DF+ VTK DD W+ LKP++ +M+ +G P+L +
Sbjct: 39 SPLAEALFGLEGVARVFLGGDFVAVTK-DDATAWQALKPQVLGLLMEHLMAGKPILREGI 97
Query: 109 PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPS 168
D + D E V IKELLD+RIRP V DGGDI F ++ GVV LKMQG+C CPS
Sbjct: 98 ALEDEDVDPADQEIVDQIKELLDSRIRPAVAGDGGDIIFRGYRDGVVSLKMQGACAGCPS 157
Query: 169 SVVTLKNGVQNMLQFYIPETT 189
S TLK+G++NML+ YIPE T
Sbjct: 158 STATLKHGIENMLKHYIPEVT 178
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+RIRP V DGGDI F ++DGV+
Sbjct: 115 IKELLDSRIRPAVAGDGGDIIFRGYRDGVV 144
>gi|111035797|emb|CAL29424.1| NifU-related protein [Wolbachia endosymbiont of Onchocerca
volvulus]
Length = 194
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 104/158 (65%), Gaps = 6/158 (3%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G+T+DF + S L LFRIE V VFFGHDFI+VTK DD ++W LK E+ TIM
Sbjct: 30 GETVDFSSANETKNSKLAANLFRIEHVIRVFFGHDFISVTKSDD-INWNTLKVEVLTTIM 88
Query: 95 DFFSSGLPVLTDAQPSSDTVIHED-----DDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
D F+S L + + ++ E+ D E V I+EL+++ I+P V +DGGDI+F
Sbjct: 89 DHFASSGKALDREGTNDNDILEEEFFDKSDTEIVSRIRELMESYIKPAVVQDGGDIKFRG 148
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++ G+V +++QG+C+ CPS+ +TLK G+QNML ++IPE
Sbjct: 149 YKNGIVYVELQGACSGCPSATITLKQGIQNMLCYHIPE 186
Score = 37.4 bits (85), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+EL+++ I+P V +DGGDI+F +++G++
Sbjct: 125 IRELMESYIKPAVVQDGGDIKFRGYKNGIV 154
>gi|418938178|ref|ZP_13491740.1| Scaffold protein Nfu/NifU [Rhizobium sp. PDO1-076]
gi|375055179|gb|EHS51452.1| Scaffold protein Nfu/NifU [Rhizobium sp. PDO1-076]
Length = 187
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/156 (49%), Positives = 102/156 (65%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F ++A SPL +F+I GV VFFG+DF+TV+K+ + W+ LKP I TIM+
Sbjct: 27 TAEFRDAESAGVSPLASRIFQIPGVTGVFFGYDFVTVSKEGPE--WQHLKPAILGTIMEH 84
Query: 97 FSSGLPVLTDAQPSSDT----VIHEDDDET-VQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
F SG PV+ A ++D E DET V IKELL+TR+RP V +DGGDI F F+
Sbjct: 85 FMSGAPVMGSAAVANDADGDEEFFEAGDETIVATIKELLETRVRPAVAQDGGDITFRGFR 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L M+GSC CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 DGTVFLNMKGSCAGCPSSTATLKHGVQNLLRHFVPE 180
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F F+DG +
Sbjct: 119 IKELLETRVRPAVAQDGGDITFRGFRDGTV 148
>gi|418055375|ref|ZP_12693430.1| Scaffold protein Nfu/NifU [Hyphomicrobium denitrificans 1NES1]
gi|353210957|gb|EHB76358.1| Scaffold protein Nfu/NifU [Hyphomicrobium denitrificans 1NES1]
Length = 184
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/170 (48%), Positives = 110/170 (64%), Gaps = 9/170 (5%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++FI +D VL G T DF T A SPL LF IEGV VF G DFI+VTK +V
Sbjct: 14 LKFIPGRD-VLA--GGTADFRTKMDAVGSPLATRLFAIEGVDGVFLGSDFISVTK--GNV 68
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHE---DDDETVQMIKELLDTRIRPT 137
+W+ LKP + IMD + SG P +TD + S+D +D+ TV IKELL+TR+RP
Sbjct: 69 EWQHLKPMVLGAIMDHYMSGAP-MTDEEDSNDETPESYDPEDEATVATIKELLETRVRPA 127
Query: 138 VQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V +DGGDI F F+ GVV L M+G+C+ CPSS TL++G++N+L+ + PE
Sbjct: 128 VAQDGGDITFSGFREGVVYLHMRGACSGCPSSTATLRHGIENLLKHFCPE 177
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F F++GV+
Sbjct: 116 IKELLETRVRPAVAQDGGDITFSGFREGVV 145
>gi|114799747|ref|YP_759252.1| NifU domain-containing protein [Hyphomonas neptunium ATCC 15444]
gi|114739921|gb|ABI78046.1| NifU domain protein [Hyphomonas neptunium ATCC 15444]
Length = 192
Score = 150 bits (378), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 75/170 (44%), Positives = 105/170 (61%), Gaps = 15/170 (8%)
Query: 34 PGQTI-------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
PGQ + DFP +A S L + LF++EGV+ VF G DF+++ K D DW+ +K
Sbjct: 18 PGQPVVGDRGPFDFPDAASARTSLLARALFQVEGVERVFLGSDFVSINKAQDK-DWRHVK 76
Query: 87 PEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDD-----DETVQMIKELLDTRIRPTVQED 141
P + A IMD + SGLPV+ + S+ + E + E V IKEL++TR+RP V +D
Sbjct: 77 PMVLAAIMDHYMSGLPVIEEGTSSASSGADETEYEGETAEIVNEIKELIETRVRPAVAQD 136
Query: 142 GGDIQFISFQG--GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
GGDI F F G+V L M+G+C CPSS +TLK G++NML+ Y+PE T
Sbjct: 137 GGDITFHRFDADTGIVHLSMRGACAGCPSSTMTLKQGIENMLRTYVPEVT 186
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
IKEL++TR+RP V +DGGDI F F
Sbjct: 121 IKELIETRVRPAVAQDGGDITFHRF 145
>gi|378733030|gb|EHY59489.1| thioredoxin-like protein [Exophiala dermatitidis NIH/UT8656]
Length = 315
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 106/165 (64%), Gaps = 17/165 (10%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P + SPL L ++GVKSVF+G DFITVTK +D V+W +KPE+F+ I
Sbjct: 109 PRSTIGGP-----HPSPLAAKLLGVDGVKSVFYGPDFITVTKAED-VNWAHVKPEVFSLI 162
Query: 94 MDFFSSGLPVLTDAQPSSDT-----------VIHEDDDETVQMIKELLDTRIRPTVQEDG 142
+ +SG P++ ++ + ++DDDE V MIKELL+TRIRP +QEDG
Sbjct: 163 TEAITSGEPIVNTVDKATASEGQEGGGPDSLAANDDDDEVVAMIKELLETRIRPAIQEDG 222
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GDI+F F G V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 223 GDIEFRGFHDGQVLLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 267
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TRIRP +QEDGGDI+F F DG
Sbjct: 205 MIKELLETRIRPAIQEDGGDIEFRGFHDG 233
>gi|220924300|ref|YP_002499602.1| Scaffold protein Nfu/NifU [Methylobacterium nodulans ORS 2060]
gi|219948907|gb|ACL59299.1| Scaffold protein Nfu/NifU [Methylobacterium nodulans ORS 2060]
Length = 187
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 96/145 (66%), Gaps = 3/145 (2%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL- 104
A SPL + LF + GV V+FGHDFI+VTK +D +W +KP + IM+ F SG PVL
Sbjct: 36 AARSPLAQALFAVPGVAGVYFGHDFISVTKAEDGPEWPQVKPAVLGAIMEHFLSGAPVLE 95
Query: 105 --TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGS 162
+ +S+ E D +TV IK+LL+TR+RP V DGGDI F ++ GVV L+M+G+
Sbjct: 96 AGAAGEGTSEEFFEEADADTVATIKDLLETRVRPAVAGDGGDITFRGYREGVVYLEMKGA 155
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPE 187
C+ CPSS TL+ GVQN+ + ++PE
Sbjct: 156 CSGCPSSTATLRQGVQNLFRHFLPE 180
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
IK+LL+TR+RP V DGGDI F +++GV LE G P+ A
Sbjct: 119 IKDLLETRVRPAVAGDGGDITFRGYREGVVYLEMKGACSGCPSSTA 164
>gi|440225350|ref|YP_007332441.1| nitrogen-fixing NifU-like protein [Rhizobium tropici CIAT 899]
gi|440036861|gb|AGB69895.1| nitrogen-fixing NifU-like protein [Rhizobium tropici CIAT 899]
Length = 188
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 100/157 (63%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K+ + W+ LKP I +IM+
Sbjct: 27 TAEFRSAEEAEASPLAARLFEIPGVIGVYFGYDFISVSKEQQE--WQHLKPAILGSIMEH 84
Query: 97 FSSGLPV------LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV L++ Q + E D+ V IKELLDTR+RP V +DGGDI F F
Sbjct: 85 FMSGKPVMGSASVLSEVQDAGGEFFDEGDESIVLTIKELLDTRVRPAVAQDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+GSC CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 RDGKVYLNMKGSCAGCPSSTATLKHGVQNLLRHFVPE 181
Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELLDTR+RP V +DGGDI F F+DG
Sbjct: 120 IKELLDTRVRPAVAQDGGDITFRGFRDG 147
>gi|346972175|gb|EGY15627.1| HIRA-interacting protein [Verticillium dahliae VdLs.17]
Length = 292
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 118/193 (61%), Gaps = 22/193 (11%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGV 61
+K L + R+ P +G + +I + + P TI P + SPL L I+GV
Sbjct: 79 LKFLPNHRVLP----EGITVPYIEYLN-----PRATIAPP-----HPSPLAAQLLAIDGV 124
Query: 62 KSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL-----TDAQPSSD--TV 114
+VF+G DFITVTK D +W ++ EIFA I + +SG P++ +A P+ +
Sbjct: 125 TAVFYGADFITVTKAAD-ANWAHVRAEIFALITEAITSGAPLVVVKDGAEAAPAEEDSLA 183
Query: 115 IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLK 174
+EDD E V MIKELL+TRIRP +QEDGGDI+F F+ GVV LK++G+C +C SS VTLK
Sbjct: 184 YNEDDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGVVLLKLRGACRTCDSSTVTLK 243
Query: 175 NGVQNMLQFYIPE 187
NG++ ML YI E
Sbjct: 244 NGIEGMLMHYIEE 256
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F+DGV+
Sbjct: 194 MIKELLETRIRPAIQEDGGDIEFRGFEDGVV 224
>gi|340507879|gb|EGR33740.1| hypothetical protein IMG5_041320 [Ichthyophthirius multifiliis]
Length = 170
Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 103/158 (65%), Gaps = 5/158 (3%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T+D + A SPL + LF I+G+ VF+ D+I+++K ++ W LK E+ I
Sbjct: 4 GSTLDIVNQKYASISPLAERLFNIKGINRVFYAKDYISISKTEES-QWDNLKEEVIKLIK 62
Query: 95 DFFSSGL-PVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ-- 151
F P+L D+QP+SDT I E+D E VQMIKE++DTRIRP VQ+DGGDI F F
Sbjct: 63 QHFEEKKEPLLLDSQPNSDT-IKEEDSEVVQMIKEIIDTRIRPMVQDDGGDIIFKRFNED 121
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
G+V L M GSC+ CPSS VTLKNG++ M+ Y+PE +
Sbjct: 122 SGIVILSMMGSCSGCPSSQVTLKNGIEKMIMHYVPEVS 159
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG----VLEEPGQTIDFPTGQAAYCSPLGKLLF 56
MIKE++DTRIRP VQ+DGGDI F F + +L G P+ Q + + K++
Sbjct: 93 MIKEIIDTRIRPMVQDDGGDIIFKRFNEDSGIVILSMMGSCSGCPSSQVTLKNGIEKMIM 152
Query: 57 R----IEGVKSVFFGH 68
+ GV+S FG
Sbjct: 153 HYVPEVSGVESEDFGE 168
>gi|393247544|gb|EJD55051.1| HIRA-interacting protein 5 [Auricularia delicata TFB-10046 SS5]
Length = 223
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 109/164 (66%), Gaps = 7/164 (4%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
V+ E G + +F ++A SPL L ++GV VFFG DF+TV+K D + W +LKPEI
Sbjct: 22 VMGEDGGSAEFLDTRSALASPLALRLMGVDGVTGVFFGPDFVTVSK-DGETAWPVLKPEI 80
Query: 90 FATIMDFFSSGLPVLTDAQPSS-----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
++ +M+ FS+ P+ Q + DT + E D +TV MIKELLDTR+RP + EDGGD
Sbjct: 81 YSILMEHFSAQAPLFRSDQERAAAGPQDTRVLETDSDTVAMIKELLDTRVRPAIMEDGGD 140
Query: 145 IQFISF-QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
I++ F + G+V++K++GSC C SS VTLK+G++ ML YIPE
Sbjct: 141 IEYRGFGEDGIVRVKLKGSCRGCDSSTVTLKSGIERMLMHYIPE 184
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 27/32 (84%), Gaps = 1/32 (3%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF-QDGVL 31
MIKELLDTR+RP + EDGGDI++ F +DG++
Sbjct: 121 MIKELLDTRVRPAIMEDGGDIEYRGFGEDGIV 152
>gi|336364327|gb|EGN92687.1| hypothetical protein SERLA73DRAFT_190703 [Serpula lacrymans var.
lacrymans S7.3]
Length = 300
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 105/157 (66%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F +++ SPL L ++GVK+VF+G DF+TV+K D + W +LKPEI++ +M+
Sbjct: 101 TAEFLDTRSSLSSPLAIRLMGVQGVKAVFYGPDFVTVSK-DSENPWAVLKPEIYSLLMEH 159
Query: 97 FSSGLPVLT-----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
FSSG P+ DA DT I + D ETV MIKELL+TR+RP + EDGGDI++
Sbjct: 160 FSSGQPLFRSQEERDAAGPQDTKILDTDSETVAMIKELLETRVRPAIMEDGGDIEYRGLS 219
Query: 152 G-GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G VK+K++GSC C SS VTLK+G++ ML YIPE
Sbjct: 220 DEGFVKIKLKGSCRGCDSSTVTLKSGIERMLMHYIPE 256
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TR+RP + EDGGDI++ D
Sbjct: 193 MIKELLETRVRPAIMEDGGDIEYRGLSD 220
>gi|319405374|emb|CBI78993.1| NifU-related protein [Bartonella sp. AR 15-3]
Length = 190
Score = 149 bits (377), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/145 (51%), Positives = 95/145 (65%), Gaps = 3/145 (2%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I +KSVF G+DFIT+TK D + WK LKP I TIM+ F S PV
Sbjct: 35 EAAKNSPLAAKLFNIPNIKSVFLGYDFITITKNDGE--WKHLKPAILGTIMEHFLSNDPV 92
Query: 104 LT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGS 162
+T + S E D + V +IKELL+TR+RP V DGGDI F F G+V L M+G+
Sbjct: 93 ITTEVHISDKEFFDEKDTDIVVVIKELLETRVRPAVANDGGDITFCGFANGIVYLNMRGA 152
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPE 187
C CPSS TLK+G++N+L+ +IPE
Sbjct: 153 CAGCPSSTATLKHGIENLLRHFIPE 177
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
+IKELL+TR+RP V DGGDI F F +G+ L G P+ A + LL
Sbjct: 115 VIKELLETRVRPAVANDGGDITFCGFANGIVYLNMRGACAGCPSSTATLKHGIENLL 171
>gi|406701080|gb|EKD04234.1| iron ion homeostasis-related protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 223
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV G T +F ++A SPL L IEG+ VF+G DF+T TK DD W
Sbjct: 14 LKFIPGVPVTKGSTYEFLDLRSALKSPLATRLLNIEGIVGVFYGPDFVTCTK-DDSFQWN 72
Query: 84 LLKPEIFATIMDFFSSGLPVL----TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
+LKPE+FA +M+ FSSG + + + + DT + + D + V MIKELL+TR+RP +Q
Sbjct: 73 ILKPEVFAILMEHFSSGAQLFREEHAEGEGAEDTRVLDSDSDVVAMIKELLETRVRPAIQ 132
Query: 140 EDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
EDGGDI++ F + G V LK+ GSC C SS VTLKNG++ ML Y+PE
Sbjct: 133 EDGGDIEYRGFDEEKGTVFLKLMGSCRGCSSSEVTLKNGIERMLMHYVPE 182
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKELL+TR+RP +QEDGGDI++ F EE G G CS
Sbjct: 118 MIKELLETRVRPAIQEDGGDIEYRGFD----EEKGTVFLKLMGSCRGCS 162
>gi|407799894|ref|ZP_11146762.1| nifU domain protein [Oceaniovalibus guishaninsula JLT2003]
gi|407057886|gb|EKE43854.1| nifU domain protein [Oceaniovalibus guishaninsula JLT2003]
Length = 187
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 98/162 (60%), Gaps = 9/162 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP A SPL +F +EGV VF G DF+TVTK D V+W +KP
Sbjct: 18 PGQTVLDAGTADFPNPDTADASPLASRIFAVEGVTGVFLGTDFVTVTKADA-VEWDHVKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHED--DDETVQMIKELLDTRIRPTVQEDGGDI 145
I +M+ F SG P + + +S D D V IKELLDTR+RP V +DGGDI
Sbjct: 77 AILGAVMEHFQSGQPAMANDAAASGGHAAHDGPDAAIVGQIKELLDTRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F G+V L MQG+C CPSS +TLK G++N+L+ YIPE
Sbjct: 137 TFHGFDRGIVYLHMQGACAGCPSSTLTLKMGIENLLRHYIPE 178
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F G++
Sbjct: 117 IKELLDTRVRPAVAQDGGDITFHGFDRGIV 146
>gi|336378291|gb|EGO19449.1| hypothetical protein SERLADRAFT_401751 [Serpula lacrymans var.
lacrymans S7.9]
Length = 250
Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 105/157 (66%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F +++ SPL L ++GVK+VF+G DF+TV+K D + W +LKPEI++ +M+
Sbjct: 58 TAEFLDTRSSLSSPLAIRLMGVQGVKAVFYGPDFVTVSK-DSENPWAVLKPEIYSLLMEH 116
Query: 97 FSSGLPVLT-----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
FSSG P+ DA DT I + D ETV MIKELL+TR+RP + EDGGDI++
Sbjct: 117 FSSGQPLFRSQEERDAAGPQDTKILDTDSETVAMIKELLETRVRPAIMEDGGDIEYRGLS 176
Query: 152 G-GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G VK+K++GSC C SS VTLK+G++ ML YIPE
Sbjct: 177 DEGFVKIKLKGSCRGCDSSTVTLKSGIERMLMHYIPE 213
Score = 43.1 bits (100), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TR+RP + EDGGDI++ D
Sbjct: 150 MIKELLETRVRPAIMEDGGDIEYRGLSD 177
>gi|339018375|ref|ZP_08644512.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
tropicalis NBRC 101654]
gi|338752550|dbj|GAA07816.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter
tropicalis NBRC 101654]
Length = 187
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 102/152 (67%), Gaps = 2/152 (1%)
Query: 37 TIDFPTGQA-AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
TIDF + A SPL LF I GV VF G+DF+++TK D + DW ++ ++ A ++D
Sbjct: 28 TIDFIDADSVAGRSPLADALFAIPGVSRVFLGNDFVSITKADSE-DWSDVRAKVLAALVD 86
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
F +G PV+ + ++ I +D E V+ IKELLDTR+RP V DGGDI F ++ GVV
Sbjct: 87 HFVAGFPVVAEGVGITEEPIAPEDKEIVEQIKELLDTRVRPAVAGDGGDIVFRGYRDGVV 146
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 147 RLTMQGACSGCPSSRATLKHGVENMLRHYVPE 178
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELLDTR+RP V DGGDI F ++DGV+
Sbjct: 117 IKELLDTRVRPAVAGDGGDIVFRGYRDGVVR 147
>gi|319406947|emb|CBI80584.1| NifU-related protein [Bartonella sp. 1-1C]
Length = 190
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/166 (46%), Positives = 105/166 (63%), Gaps = 4/166 (2%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQ-AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
+ F G + P T++F + AA SPL LF I +KSVF G+DFIT+TK D + W
Sbjct: 14 LKFLPGRIVLPQGTLEFHNREEAAKNSPLAAKLFNIPNIKSVFLGYDFITITKNDGE--W 71
Query: 83 KLLKPEIFATIMDFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQED 141
+ LKP I TIM+ F S PV+T + + E D + V +IKELL+TR+RP V D
Sbjct: 72 QHLKPAILGTIMEHFLSNDPVITTETNIPNKEFFDEKDTDIVIVIKELLETRVRPAVAND 131
Query: 142 GGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GGDI F F+ G+V L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 132 GGDITFCGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHFIPE 177
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IKELL+TR+RP V DGGDI F F++G++
Sbjct: 115 VIKELLETRVRPAVANDGGDITFCGFENGIV 145
>gi|347761181|ref|YP_004868742.1| nitrogen fixing thioredoxin-like protein [Gluconacetobacter xylinus
NBRC 3288]
gi|347580151|dbj|BAK84372.1| nitrogen fixing thioredoxin-like protein [Gluconacetobacter xylinus
NBRC 3288]
Length = 187
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 107/155 (69%), Gaps = 4/155 (2%)
Query: 35 GQTIDFPT-GQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
G T DF + A S L ++LF ++GV VFFG+DF+ VT+ D +W+ L+P++ A +
Sbjct: 26 GATADFISPDSVAGRSKLAEVLFDLDGVARVFFGNDFVAVTRADS-TEWEGLRPQVLAVL 84
Query: 94 MDFFSSGLPVL-TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
D+ ++G V+ +DAQ D +I D+E VQ IKELLDTR+RP V DGGDI F ++
Sbjct: 85 ADYLATGQAVVESDAQVVED-LIAPGDEEIVQQIKELLDTRVRPAVAGDGGDIVFRGYRD 143
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V+L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 144 GIVRLTMQGACSGCPSSRATLKHGVENMLRHYVPE 178
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELLDTR+RP V DGGDI F ++DG++
Sbjct: 117 IKELLDTRVRPAVAGDGGDIVFRGYRDGIVR 147
>gi|119496847|ref|XP_001265197.1| NifU-related protein [Neosartorya fischeri NRRL 181]
gi|119413359|gb|EAW23300.1| NifU-related protein [Neosartorya fischeri NRRL 181]
Length = 326
Score = 149 bits (375), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 76/170 (44%), Positives = 104/170 (61%), Gaps = 22/170 (12%)
Query: 39 DFPTGQAAYCSPLGKL-----------LFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
DFPT Y SP L LF ++GV SVF+G DFITV+K D +W +KP
Sbjct: 110 DFPTSFLEYLSPRSTLAPPHPSPLAANLFNVDGVTSVFYGPDFITVSK-SSDANWAHIKP 168
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTV----------IHEDDDETVQMIKELLDTRIRPT 137
E+F+ I +SG ++ + + + +E+DDE V MIKELL+TRIRP
Sbjct: 169 EVFSLITQAVTSGEAIVNTVEKTGEHAQEGGEEESLSFNEEDDEVVSMIKELLETRIRPA 228
Query: 138 VQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+QEDGGDI+ F+ G+VKLK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 229 IQEDGGDIELRGFENGIVKLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 278
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRP +QEDGGDI+ F++G+++
Sbjct: 216 MIKELLETRIRPAIQEDGGDIELRGFENGIVK 247
>gi|452003502|gb|EMD95959.1| hypothetical protein COCHEDRAFT_1191111 [Cochliobolus
heterostrophus C5]
Length = 311
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/152 (49%), Positives = 97/152 (63%), Gaps = 12/152 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL L I+GV SVFFG D+ITVTK D W +KPE+FA I +F +SG P++
Sbjct: 113 HPSPLAAQLLNIDGVTSVFFGADYITVTK-DSATPWSHIKPEVFAIITEFMTSGSPIVNT 171
Query: 107 -----------AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
Q + E+DDE V MIKELL+TR+RP +QEDGGDI+F F G V
Sbjct: 172 VAAKAGEQGQGGQEADSLAYDENDDEVVGMIKELLETRVRPAIQEDGGDIEFRGFNDGQV 231
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 232 LLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 263
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TR+RP +QEDGGDI+F F DG
Sbjct: 201 MIKELLETRVRPAIQEDGGDIEFRGFNDG 229
>gi|425772864|gb|EKV11248.1| NifU-related protein [Penicillium digitatum PHI26]
gi|425782025|gb|EKV19956.1| NifU-related protein [Penicillium digitatum Pd1]
Length = 311
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 102/150 (68%), Gaps = 10/150 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
+ SPL L +EGV SVF+G DFITVTK D +W +KPE+F+ I +SG ++T
Sbjct: 119 HPSPLAAKLLDVEGVTSVFYGTDFITVTK-GSDANWAHIKPEVFSIITQAVTSGETIVTT 177
Query: 106 ------DAQPSSDTVI--HEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKL 157
+ Q S + + +EDDDE V MIKELL+TRIRP +QEDGGDI+F F+ G+V L
Sbjct: 178 VEGAIGNKQESGEDSLSFNEDDDEVVSMIKELLETRIRPAIQEDGGDIEFKGFEDGIVML 237
Query: 158 KMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
K++G+C +C SS VTLKNG+++ML YI E
Sbjct: 238 KLRGACRTCDSSTVTLKNGIESMLMHYIEE 267
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F+DG++
Sbjct: 205 MIKELLETRIRPAIQEDGGDIEFKGFEDGIV 235
>gi|156044806|ref|XP_001588959.1| hypothetical protein SS1G_10507 [Sclerotinia sclerotiorum 1980]
gi|154694895|gb|EDN94633.1| hypothetical protein SS1G_10507 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 372
Score = 149 bits (375), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 102/151 (67%), Gaps = 11/151 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
+ SPL L I+GVKSVF+G DFITVTK DD +W +KPEIF+ I + +SG ++
Sbjct: 120 HPSPLAASLMNIDGVKSVFYGVDFITVTKADD-ANWAHIKPEIFSLITEAVTSGAQIVNI 178
Query: 106 --------DAQPSSDTVIH-EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+A D++ + EDD E V MIKELL+TRIRP +QEDGGDI + F+ G+VK
Sbjct: 179 TEKTGASGEAPEEEDSLAYNEDDPEVVGMIKELLETRIRPAIQEDGGDIDYRGFEDGMVK 238
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 239 LKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 269
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRP +QEDGGDI + F+DG+++
Sbjct: 207 MIKELLETRIRPAIQEDGGDIDYRGFEDGMVK 238
>gi|294085162|ref|YP_003551922.1| nitrogen-fixing NifU domain-containing protein [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292664737|gb|ADE39838.1| nitrogen-fixing NifU domain protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 187
Score = 148 bits (374), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 82/161 (50%), Positives = 107/161 (66%), Gaps = 5/161 (3%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
VLE+ T DFP +A SP+ + LF+++GV VF G DFI VTK D+ +DW LKP I
Sbjct: 22 VLEQ--GTADFPAADSAGSSPMARRLFQVDGVAGVFLGGDFIAVTKVDE-MDWFALKPSI 78
Query: 90 FATIMDFFSSGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
A IM+ F+SGLPV+ D + ++DD+TV+ IK LLDTR+RP V DGGDI F
Sbjct: 79 LAGIMEHFASGLPVIEDNAGNMTDANTDDDEDDDTVKQIKHLLDTRVRPAVAMDGGDIVF 138
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
F GVV L+M+G+C CPSS TLK G++NML+ YIP+
Sbjct: 139 QDFDDGVVTLQMRGACQGCPSSTATLKMGIENMLKHYIPQV 179
Score = 43.5 bits (101), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 22/30 (73%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK LLDTR+RP V DGGDI F F DGV+
Sbjct: 117 IKHLLDTRVRPAVAMDGGDIVFQDFDDGVV 146
>gi|401881837|gb|EJT46119.1| hypothetical protein A1Q1_05330 [Trichosporon asahii var. asahii
CBS 2479]
Length = 223
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 107/170 (62%), Gaps = 7/170 (4%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV G T +F ++A SPL L IEG+ VF+G DF+T TK DD W
Sbjct: 14 LKFIPGVPVTKGSTYEFLDLRSALKSPLATRLLNIEGIVGVFYGPDFVTCTK-DDSFQWN 72
Query: 84 LLKPEIFATIMDFFSSGLPVL----TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
+LKPE+FA +M+ FSSG + + + + DT + + D + V MIKELL+TR+RP +Q
Sbjct: 73 ILKPEVFAILMEHFSSGAQLFREEHAEGEGAEDTRVLDSDSDVVAMIKELLETRVRPAIQ 132
Query: 140 EDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
EDGGDI++ F + G V LK+ GSC C SS VTLKNG++ ML Y+PE
Sbjct: 133 EDGGDIEYRGFDEEKGTVFLKLMGSCRGCSSSEVTLKNGIERMLMHYVPE 182
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKELL+TR+RP +QEDGGDI++ F EE G G CS
Sbjct: 118 MIKELLETRVRPAIQEDGGDIEYRGFD----EEKGTVFLKLMGSCRGCS 162
>gi|209883678|ref|YP_002287535.1| nitrogen-fixing NifU domain-containing protein [Oligotropha
carboxidovorans OM5]
gi|337739259|ref|YP_004630987.1| NFU iron-sulfur cluster scaffold-like protein [Oligotropha
carboxidovorans OM5]
gi|386028278|ref|YP_005949053.1| NFU iron-sulfur cluster scaffold protein [Oligotropha
carboxidovorans OM4]
gi|209871874|gb|ACI91670.1| nitrogen-fixing NifU domain protein [Oligotropha carboxidovorans
OM5]
gi|336093346|gb|AEI01172.1| NFU iron-sulfur cluster scaffold protein [Oligotropha
carboxidovorans OM4]
gi|336096923|gb|AEI04746.1| NFU iron-sulfur cluster scaffold-like protein [Oligotropha
carboxidovorans OM5]
Length = 187
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/169 (44%), Positives = 106/169 (62%), Gaps = 7/169 (4%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G L T++F + SPL LF I GV VF+ DFITVTK + D W+
Sbjct: 14 LKFLPGRLVIESGTMEFTDRDSTARSPLAAKLFDIPGVTGVFYSSDFITVTKGEGD--WQ 71
Query: 84 LLKPEIFATIMDFFSSGLPVLTD-----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTV 138
LKP I TIM+ + SG P+L D A P ++ +E D ETV +IK++++TR+RP V
Sbjct: 72 HLKPAILGTIMEHYMSGAPILADGAKPDAGPHAEEFFNEADAETVTIIKDIIETRVRPAV 131
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI F F+ G+V L M+GSC+ CPSS TLK+G+QN+L+ ++P+
Sbjct: 132 ASDGGDITFRGFKDGIVFLDMKGSCSGCPSSTATLKHGIQNLLKHFVPD 180
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK++++TR+RP V DGGDI F F+DG++
Sbjct: 118 IIKDIIETRVRPAVASDGGDITFRGFKDGIV 148
>gi|427427628|ref|ZP_18917672.1| NifU-like domain protein [Caenispirillum salinarum AK4]
gi|425883554|gb|EKV32230.1| NifU-like domain protein [Caenispirillum salinarum AK4]
Length = 185
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/164 (48%), Positives = 106/164 (64%), Gaps = 1/164 (0%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G P T DF + + A SPL LF I+GV VF G DF+TVTKQ+ DW+
Sbjct: 14 LKFLPGRQVMPAGTADFTSPEEADPSPLATRLFGIDGVTGVFLGADFVTVTKQEGR-DWQ 72
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGG 143
++KP + IM+ F+SG PV+ + D E+DDE V IKEL+D R+RP V DGG
Sbjct: 73 VMKPMVLGAIMEHFTSGQPVIREDAVQGDAAADEEDDEIVAQIKELIDQRVRPVVARDGG 132
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI + F+ GVV L MQGSC+ CPSS +TLKNG++NML+ ++PE
Sbjct: 133 DIVYRGFKDGVVYLHMQGSCSGCPSSTMTLKNGIENMLRHFVPE 176
Score = 42.7 bits (99), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL+D R+RP V DGGDI + F+DGV+
Sbjct: 115 IKELIDQRVRPVVARDGGDIVYRGFKDGVV 144
>gi|115390869|ref|XP_001212939.1| HIRA-interacting protein 5 [Aspergillus terreus NIH2624]
gi|114193863|gb|EAU35563.1| HIRA-interacting protein 5 [Aspergillus terreus NIH2624]
Length = 323
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 98/151 (64%), Gaps = 11/151 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL L +EGV SVF+G DFITVTK D +W +KPE+F+ I +SG ++
Sbjct: 130 HPSPLAANLLNVEGVTSVFYGPDFITVTKASD-ANWAHIKPEVFSLITQAVTSGEALVNT 188
Query: 107 AQPSSDTV----------IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+ + +E+DDE V MIKELLDTRIRP +QEDGGDI+F F+ G+V
Sbjct: 189 VAKTGEHAQEGGEEESLGYNEEDDEVVSMIKELLDTRIRPAIQEDGGDIEFRGFENGIVM 248
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTL+NG+++ML YI E
Sbjct: 249 LKLRGACRTCDSSTVTLRNGIESMLMHYIEE 279
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELLDTRIRP +QEDGGDI+F F++G++
Sbjct: 217 MIKELLDTRIRPAIQEDGGDIEFRGFENGIV 247
>gi|325291785|ref|YP_004277649.1| scaffold protein Nfu/NifU [Agrobacterium sp. H13-3]
gi|418407878|ref|ZP_12981195.1| scaffold protein Nfu/NifU [Agrobacterium tumefaciens 5A]
gi|325059638|gb|ADY63329.1| putative scaffold protein Nfu/NifU [Agrobacterium sp. H13-3]
gi|358005864|gb|EHJ98189.1| scaffold protein Nfu/NifU [Agrobacterium tumefaciens 5A]
Length = 187
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/156 (50%), Positives = 100/156 (64%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F A SPL + LF I GV V+FG DFITVTK DD +W+ LKP I +IM+
Sbjct: 27 TAEFLNPAQAQASPLAERLFTIPGVTGVYFGFDFITVTK--DDAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQPSS----DTVIHEDDDET-VQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
F SG P++ A + + E DET V IKELLDTR+RP V +DGGDI F F+
Sbjct: 85 FMSGRPIMGTAIAAEVSDEEGEFFEAGDETIVATIKELLDTRVRPAVAQDGGDITFRGFR 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L M+G+C+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 DGTVFLNMKGACSGCPSSTATLKHGVQNLLRHFVPE 180
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F+DG +
Sbjct: 119 IKELLDTRVRPAVAQDGGDITFRGFRDGTV 148
>gi|217979031|ref|YP_002363178.1| Scaffold protein Nfu/NifU [Methylocella silvestris BL2]
gi|217504407|gb|ACK51816.1| Scaffold protein Nfu/NifU [Methylocella silvestris BL2]
Length = 187
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 102/156 (65%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+D + A SPL + LF ++GVK VFFG DFITVT ++D W+ LKP + IM+
Sbjct: 27 TLDIKEPEDARQSPLAEALFELDGVKGVFFGSDFITVTNANED--WQELKPTVLGAIMEH 84
Query: 97 FSSGLPVLTD-AQPSSDT----VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
F SG P+L + A S D E D ETV IK+L++T +RP V DGGDI+F ++
Sbjct: 85 FLSGDPLLNEHAHVSPDAGEREFFEESDAETVTAIKQLIETHVRPAVANDGGDIKFRGYR 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V L M+GSC+ CPSS TLK+G+QN+L+ Y+P+
Sbjct: 145 DGIVYLAMKGSCSGCPSSTATLKHGIQNLLKHYVPD 180
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+L++T +RP V DGGDI+F ++DG++
Sbjct: 119 IKQLIETHVRPAVANDGGDIKFRGYRDGIV 148
>gi|171689560|ref|XP_001909720.1| hypothetical protein [Podospora anserina S mat+]
gi|170944742|emb|CAP70853.1| unnamed protein product [Podospora anserina S mat+]
Length = 323
Score = 148 bits (373), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 104/170 (61%), Gaps = 22/170 (12%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L ++GV SVF+G DFITVTK D V W ++PEIF+ I
Sbjct: 113 PRSTISPP-----YPSPLAANLMNVDGVTSVFYGQDFITVTKSADAV-WAHIRPEIFSLI 166
Query: 94 MDFFSSGLPVLTDAQPSSDTV----------------IHEDDDETVQMIKELLDTRIRPT 137
+ +SG P++ +Q S+ + E+D E V MIKELL+TRIRP
Sbjct: 167 TEAITSGQPLVNISQQSASSPSTAEQEQESGERDSLEYDENDSEVVGMIKELLETRIRPA 226
Query: 138 VQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+QEDGGDI+F F+ G+V LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 227 IQEDGGDIEFRGFENGIVMLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 276
Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F++G++
Sbjct: 214 MIKELLETRIRPAIQEDGGDIEFRGFENGIV 244
>gi|403413258|emb|CCL99958.1| predicted protein [Fibroporia radiculosa]
Length = 254
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 106/157 (67%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F ++A SPL L IEGV +VF+G DF+TV+K D + W ++KPEI++ +M+F
Sbjct: 62 TAEFLDTKSALKSPLAIRLMGIEGVTTVFYGPDFVTVSK-DSETAWAVVKPEIYSILMEF 120
Query: 97 FSSGLPVLT-----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
FSS P+ DA DT I + D ETV MIKELL+TR+RP + EDGGDI++ F
Sbjct: 121 FSSSQPLFRSQEDRDAAGPLDTQILDTDSETVAMIKELLETRVRPAIMEDGGDIEYRGFT 180
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V++K++GSC C SS VTLK+G++ ML YIPE
Sbjct: 181 DDGIVEVKLKGSCRGCDSSTVTLKSGIERMLMHYIPE 217
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%), Gaps = 1/33 (3%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF-QDGVLE 32
MIKELL+TR+RP + EDGGDI++ F DG++E
Sbjct: 154 MIKELLETRVRPAIMEDGGDIEYRGFTDDGIVE 186
>gi|406859769|gb|EKD12832.1| NifU-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 312
Score = 147 bits (372), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 97/152 (63%), Gaps = 12/152 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
+ SPL L I+GV SVF+G DFITVTK D +W +KPE+F+ I + +SG ++
Sbjct: 113 HPSPLAASLMNIDGVTSVFYGADFITVTKAAD-TNWAHIKPEVFSLITEAVTSGAQIVNI 171
Query: 106 ----------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
D +E+D E V MIKELL+TRIRP +QEDGGDI+F F+GG+V
Sbjct: 172 TENKSGEQGQDGAQEDSLAYNENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEGGIV 231
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 232 NLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 263
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F+ G++
Sbjct: 201 MIKELLETRIRPAIQEDGGDIEFRGFEGGIV 231
>gi|430001969|emb|CCF17749.1| putative nifU protein, iron-sulfur cluster scaffold homolog
[Rhizobium sp.]
Length = 188
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 100/157 (63%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF A SPL LF + GV V+FG+DFITVTK+ +W+ LKP I +IM+
Sbjct: 27 TADFRNAGEAEASPLASRLFAVPGVTGVYFGYDFITVTKESG--EWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTV-----IHEDDDET-VQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG PV+ +++ +++ DET V IKELL+TR+RP V +DGGDI F F
Sbjct: 85 FMSGQPVMGGGTSTAEAFDEEGEFYDEGDETIVATIKELLETRVRPAVAQDGGDITFKGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L M+G+C+ CPSS TLK+GV N+L+ ++PE
Sbjct: 145 KDGTVYLNMKGACSGCPSSTATLKHGVHNLLRHFVPE 181
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F F+DG +
Sbjct: 120 IKELLETRVRPAVAQDGGDITFKGFKDGTV 149
>gi|17988091|ref|NP_540725.1| NifU protein [Brucella melitensis bv. 1 str. 16M]
gi|260563213|ref|ZP_05833699.1| nitrogen-fixing NifU [Brucella melitensis bv. 1 str. 16M]
gi|265992342|ref|ZP_06104899.1| scaffold protein Nfu/NifU [Brucella melitensis bv. 1 str. Rev.1]
gi|17983843|gb|AAL52989.1| nifu protein [Brucella melitensis bv. 1 str. 16M]
gi|260153229|gb|EEW88321.1| nitrogen-fixing NifU [Brucella melitensis bv. 1 str. 16M]
gi|263003408|gb|EEZ15701.1| scaffold protein Nfu/NifU [Brucella melitensis bv. 1 str. Rev.1]
Length = 190
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 103/172 (59%), Gaps = 10/172 (5%)
Query: 24 ISFQDGVLEEPGQTIDFP-TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
+ F G + P T DF A SPL LF + GV VFFG+DFITVTK+D + W
Sbjct: 14 LKFLPGKVVMPEGTADFRDPASAENTSPLAAKLFAVPGVTGVFFGYDFITVTKEDGE--W 71
Query: 83 KLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIH-------EDDDETVQMIKELLDTRIR 135
+ LKP I TIM+ F SG P + + H E D E V+ IKEL++TR+R
Sbjct: 72 QHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHGEEEFFDEADTEIVETIKELIETRVR 131
Query: 136 PTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
P V +DGGDI F F+ G V L M+G+C+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 132 PAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGVQNLLRHFVPE 183
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++TR+RP V +DGGDI F F++G +
Sbjct: 122 IKELIETRVRPAVAQDGGDITFRGFENGTV 151
>gi|85083846|ref|XP_957202.1| HIRA-interacting protein 5 [Neurospora crassa OR74A]
gi|18376131|emb|CAD21196.1| conserved hypothetical protein [Neurospora crassa]
gi|28918289|gb|EAA27966.1| HIRA-interacting protein 5 [Neurospora crassa OR74A]
Length = 326
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 100/153 (65%), Gaps = 13/153 (8%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL-- 104
Y SPL L IEGV SVF+G DFITVTK D +W ++PE+FA I + +SG ++
Sbjct: 127 YPSPLAAQLMNIEGVTSVFYGTDFITVTK-SADANWAHIRPEVFALITETITSGQTIVNV 185
Query: 105 ---------TDAQPSSDTVIH-EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
T D++ + E+D E V MIKELL+TRIRP +QEDGGDI+F F+ G+
Sbjct: 186 VERNEGEESTQESDEKDSLAYDENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGI 245
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 246 VKLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 278
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRP +QEDGGDI+F F+DG+++
Sbjct: 216 MIKELLETRIRPAIQEDGGDIEFRGFEDGIVK 247
>gi|154281411|ref|XP_001541518.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411697|gb|EDN07085.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 279
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 104/155 (67%), Gaps = 10/155 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
Y SPL L ++GV +VF+G DFIT+TK D +W +KPE+F+ I + ++G P++
Sbjct: 88 YPSPLAAKLLNVDGVSAVFYGPDFITITKAGD-ANWAHIKPEVFSLITEAVTTGEPIINV 146
Query: 106 ------DAQPSSDTV-IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
D++ +EDDDE V MIKELL+TRIRP +QEDGGDI+F F+ G+V LK
Sbjct: 147 AEAGAGAGPAEEDSLSYNEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLK 206
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLN 193
++G+C +C SS VTLKNG+++ML YI E G+N
Sbjct: 207 LRGACRTCDSSTVTLKNGIESMLMHYIEEVK-GVN 240
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F+DG++
Sbjct: 173 MIKELLETRIRPAIQEDGGDIEFRGFEDGIV 203
>gi|85714190|ref|ZP_01045179.1| nitrogen-fixing NifU [Nitrobacter sp. Nb-311A]
gi|85699316|gb|EAQ37184.1| nitrogen-fixing NifU [Nitrobacter sp. Nb-311A]
Length = 190
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 103/155 (66%), Gaps = 8/155 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F + SPL LF + GV VF+G DFITVTK DD DW+ LKP I IM+
Sbjct: 27 TMEFTSASTTARSPLAVKLFAVHGVTGVFYGSDFITVTK-DDASDWQHLKPAILGVIMEH 85
Query: 97 FSSGLPVLTD----AQPSSDTVIH---EDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
+ SG P+L D +P+++ + E D ETV +IK+L++TR+RP V +DGGDI F
Sbjct: 86 YMSGAPLLADDGGNTEPNAENDVEFFDEADAETVTLIKDLIETRVRPGVADDGGDITFRG 145
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFY 184
F+ GVV + M+G+C+ CPSS VTL+NG+QN+L+ +
Sbjct: 146 FKDGVVYVNMKGACSGCPSSTVTLRNGIQNLLKHF 180
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+L++TR+RP V +DGGDI F F+DGV+
Sbjct: 121 LIKDLIETRVRPGVADDGGDITFRGFKDGVV 151
>gi|336468407|gb|EGO56570.1| hypothetical protein NEUTE1DRAFT_32406, partial [Neurospora
tetrasperma FGSC 2508]
gi|350289337|gb|EGZ70562.1| HIRA-interacting protein 5, partial [Neurospora tetrasperma FGSC
2509]
Length = 279
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 100/153 (65%), Gaps = 13/153 (8%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL-- 104
Y SPL L IEGV SVF+G DFITVTK D +W ++PE+FA I + +SG ++
Sbjct: 80 YPSPLAAQLMNIEGVTSVFYGTDFITVTK-SADANWAHIRPEVFALITETITSGQTIVNV 138
Query: 105 ---------TDAQPSSDTVIH-EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
T D++ + E+D E V MIKELL+TRIRP +QEDGGDI+F F+ G+
Sbjct: 139 VERNEGEESTQESDEKDSLAYDENDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGI 198
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 199 VKLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 231
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRP +QEDGGDI+F F+DG+++
Sbjct: 169 MIKELLETRIRPAIQEDGGDIEFRGFEDGIVK 200
>gi|255940800|ref|XP_002561169.1| Pc16g08500 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585792|emb|CAP93520.1| Pc16g08500 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 320
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 99/150 (66%), Gaps = 10/150 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL L +EGV SVF+G DFITVTK D +W +KPE+F+ I +SG ++T
Sbjct: 128 HPSPLAAKLLDVEGVTSVFYGTDFITVTK-GSDANWAHIKPEVFSIITQAVTSGETIVTT 186
Query: 107 AQPSSD---------TVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKL 157
+ + D +EDDDE V MIKELL+TRIRP +QEDGGDI+ F+ G+V L
Sbjct: 187 IEGAVDGEQESGEDSLSFNEDDDEVVSMIKELLETRIRPAIQEDGGDIELKGFENGIVML 246
Query: 158 KMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
K++G+C +C SS VTLKNG+++ML YI E
Sbjct: 247 KLRGACRTCDSSTVTLKNGIESMLMHYIEE 276
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+ F++G++
Sbjct: 214 MIKELLETRIRPAIQEDGGDIELKGFENGIV 244
>gi|392597012|gb|EIW86334.1| HIRA-interacting protein 5 [Coniophora puteana RWD-64-598 SS2]
Length = 222
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 107/158 (67%), Gaps = 8/158 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F ++A SPL L ++GVK+VF+G DF+TV+K ++ W ++KPEI+A +M+
Sbjct: 32 TAEFLDTRSALASPLAVRLMGVDGVKAVFYGPDFVTVSKTEE-FSWAVVKPEIYAILMEH 90
Query: 97 FSSGLPVLTDAQPSS-----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
FSS P+ + DT I + D +TV MIKELL+TR+RP++ EDGGDI++ F
Sbjct: 91 FSSSAPLFRSKEDRERAGPQDTRILDTDSDTVAMIKELLETRVRPSIMEDGGDIEYRGFT 150
Query: 151 -QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G+VK+K++GSC C SS VTLK+G++ ML Y+PE
Sbjct: 151 EEDGIVKVKLKGSCRGCDSSAVTLKSGIERMLMHYVPE 188
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 29/34 (85%), Gaps = 2/34 (5%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGVLE 32
MIKELL+TR+RP++ EDGGDI++ F +DG+++
Sbjct: 124 MIKELLETRVRPSIMEDGGDIEYRGFTEEDGIVK 157
>gi|188582635|ref|YP_001926080.1| Scaffold protein Nfu/NifU [Methylobacterium populi BJ001]
gi|179346133|gb|ACB81545.1| Scaffold protein Nfu/NifU [Methylobacterium populi BJ001]
Length = 188
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 101/167 (60%), Gaps = 4/167 (2%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + P T + A SPL LF + GV V+FGHDFI+VTK D +W
Sbjct: 14 LKFLPGRVVLPEGTFEARDAAGAERSPLATALFSVPGVSGVYFGHDFISVTKADGVNEWP 73
Query: 84 LLKPEIFATIMDFFSSGLPVLTD----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
+KP + IMD F SG PVL + A+ ++ E D +TV IK+LL+TR+RP V
Sbjct: 74 QVKPAVLGAIMDHFQSGRPVLAEGTALAEDETEEFYDEADHDTVATIKDLLETRVRPAVA 133
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
DGGDI F ++ G+V L+M+G+C+ CPSS TL+ GVQN+ + ++P
Sbjct: 134 GDGGDITFRGYRDGIVYLEMKGACSGCPSSTATLRQGVQNLFRHFLP 180
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
IK+LL+TR+RP V DGGDI F ++DG+ LE G P+ A
Sbjct: 120 IKDLLETRVRPAVAGDGGDITFRGYRDGIVYLEMKGACSGCPSSTA 165
>gi|319898609|ref|YP_004158702.1| NifU-like protein [Bartonella clarridgeiae 73]
gi|319402573|emb|CBI76118.1| NifU-related protein [Bartonella clarridgeiae 73]
Length = 196
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 104/172 (60%), Gaps = 10/172 (5%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQ-AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
+ F G + P ++F + AA SPL LF I VKSVF G+DFIT+TK D + W
Sbjct: 14 LKFLPGCIVLPQGVLEFYNREEAAKNSPLAAKLFNIPNVKSVFLGYDFITITKNDGE--W 71
Query: 83 KLLKPEIFATIMDFFSSGLPVLT-------DAQPSSDTVIHEDDDETVQMIKELLDTRIR 135
+ LKP I TIM+ F S PV+T +A E D + V +IKELL+TRIR
Sbjct: 72 QHLKPAILGTIMEHFLSNDPVITTNVITQTEAHMLDKEFFDEKDADIVVVIKELLETRIR 131
Query: 136 PTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
P V DGGDI F F+ G+V L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 132 PAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IKELL+TRIRP V DGGDI F F++G++
Sbjct: 121 VIKELLETRIRPAVANDGGDITFCGFENGIV 151
>gi|240279904|gb|EER43409.1| HIRA-interacting protein [Ajellomyces capsulatus H143]
gi|325093032|gb|EGC46342.1| HIRA-interacting protein [Ajellomyces capsulatus H88]
Length = 314
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 101/149 (67%), Gaps = 9/149 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
Y SPL L ++GV +VF+G DFIT+TK D +W +KPE+F+ I + ++G P++
Sbjct: 123 YPSPLAAKLLNVDGVSAVFYGPDFITITKAGD-ANWAHIKPEVFSLITEAVTTGEPIINV 181
Query: 106 ------DAQPSSDTV-IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
D++ +EDDDE V MIKELL+TRIRP +QEDGGDI+F F+ G+V LK
Sbjct: 182 AEAGAGAGPAEEDSLSYNEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLK 241
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++G+C +C SS VTLKNG+++ML YI E
Sbjct: 242 LRGACRTCDSSTVTLKNGIESMLMHYIEE 270
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F+DG++
Sbjct: 208 MIKELLETRIRPAIQEDGGDIEFRGFEDGIV 238
>gi|70990736|ref|XP_750217.1| NifU-related protein [Aspergillus fumigatus Af293]
gi|66847849|gb|EAL88179.1| NifU-related protein [Aspergillus fumigatus Af293]
gi|159130693|gb|EDP55806.1| NifU-related protein [Aspergillus fumigatus A1163]
Length = 326
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 98/151 (64%), Gaps = 11/151 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL LF ++GV SVF+G DFITV K D +W +KPE+F+ I +SG ++
Sbjct: 129 HPSPLAANLFNVDGVTSVFYGPDFITVNK-SSDANWAHIKPEVFSLITQAVTSGEAIVNT 187
Query: 107 AQPSSDTV----------IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+ + + E+DDE V MIKELL+TRIRP +QEDGGDI+ F+ G+VK
Sbjct: 188 VEKTGEHAQESGEQESLSFSEEDDEVVSMIKELLETRIRPAIQEDGGDIELRGFENGIVK 247
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 248 LKLRGACRTCDSSTVTLKNGIESMLMHYIEE 278
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRP +QEDGGDI+ F++G+++
Sbjct: 216 MIKELLETRIRPAIQEDGGDIELRGFENGIVK 247
>gi|451856012|gb|EMD69303.1| hypothetical protein COCSADRAFT_77790 [Cochliobolus sativus ND90Pr]
Length = 311
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/152 (48%), Positives = 97/152 (63%), Gaps = 12/152 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL L I+GV SVFFG D+ITVTK D W +KPE+F+ I +F +SG P++
Sbjct: 113 HPSPLAAQLLNIDGVTSVFFGADYITVTK-DSATPWSHIKPEVFSIITEFMTSGSPIVNT 171
Query: 107 -----------AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
Q + E+DDE V MIKELL+TR+RP +QEDGGDI+F F G V
Sbjct: 172 VAAKAGEQGQGGQEADSLAYDENDDEVVGMIKELLETRVRPAIQEDGGDIEFRGFNDGQV 231
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 232 LLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 263
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TR+RP +QEDGGDI+F F DG
Sbjct: 201 MIKELLETRVRPAIQEDGGDIEFRGFNDG 229
>gi|225626680|ref|ZP_03784719.1| NifU-related protein [Brucella ceti str. Cudo]
gi|261218142|ref|ZP_05932423.1| scaffold protein Nfu/NifU [Brucella ceti M13/05/1]
gi|261221368|ref|ZP_05935649.1| scaffold protein Nfu/NifU [Brucella ceti B1/94]
gi|261314644|ref|ZP_05953841.1| scaffold protein Nfu/NifU [Brucella pinnipedialis M163/99/10]
gi|261316798|ref|ZP_05955995.1| scaffold protein Nfu/NifU [Brucella pinnipedialis B2/94]
gi|261321011|ref|ZP_05960208.1| scaffold protein Nfu/NifU [Brucella ceti M644/93/1]
gi|261759255|ref|ZP_06002964.1| nitrogen-fixing NifU [Brucella sp. F5/99]
gi|265987868|ref|ZP_06100425.1| scaffold protein Nfu/NifU [Brucella pinnipedialis M292/94/1]
gi|265997328|ref|ZP_06109885.1| scaffold protein Nfu/NifU [Brucella ceti M490/95/1]
gi|340789764|ref|YP_004755228.1| NifU-like protein [Brucella pinnipedialis B2/94]
gi|225618337|gb|EEH15380.1| NifU-related protein [Brucella ceti str. Cudo]
gi|260919952|gb|EEX86605.1| scaffold protein Nfu/NifU [Brucella ceti B1/94]
gi|260923231|gb|EEX89799.1| scaffold protein Nfu/NifU [Brucella ceti M13/05/1]
gi|261293701|gb|EEX97197.1| scaffold protein Nfu/NifU [Brucella ceti M644/93/1]
gi|261296021|gb|EEX99517.1| scaffold protein Nfu/NifU [Brucella pinnipedialis B2/94]
gi|261303670|gb|EEY07167.1| scaffold protein Nfu/NifU [Brucella pinnipedialis M163/99/10]
gi|261739239|gb|EEY27235.1| nitrogen-fixing NifU [Brucella sp. F5/99]
gi|262551796|gb|EEZ07786.1| scaffold protein Nfu/NifU [Brucella ceti M490/95/1]
gi|264660065|gb|EEZ30326.1| scaffold protein Nfu/NifU [Brucella pinnipedialis M292/94/1]
gi|340558222|gb|AEK53460.1| NifU-related protein [Brucella pinnipedialis B2/94]
Length = 190
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 103/172 (59%), Gaps = 10/172 (5%)
Query: 24 ISFQDGVLEEPGQTIDFP-TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
+ F G + P T DF A SPL LF + GV VFFG+DFITVTK+D + W
Sbjct: 14 LKFLPGKVVMPEGTADFRDPASAENTSPLAAKLFAVPGVTGVFFGYDFITVTKEDGE--W 71
Query: 83 KLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIH-------EDDDETVQMIKELLDTRIR 135
+ LKP I TIM+ F SG P + + H E D E V+ IKEL++TR+R
Sbjct: 72 QHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHSEEEFFDEADTEIVETIKELIETRVR 131
Query: 136 PTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
P V +DGGDI F F+ G V L M+G+C+ CPSS TLK+G+QN+L+ ++PE
Sbjct: 132 PAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLRHFVPE 183
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++TR+RP V +DGGDI F F++G +
Sbjct: 122 IKELIETRVRPAVAQDGGDITFRGFENGTV 151
>gi|359788252|ref|ZP_09291230.1| Scaffold protein Nfu/NifU [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255943|gb|EHK58833.1| Scaffold protein Nfu/NifU [Mesorhizobium alhagi CCNWXJ12-2]
Length = 191
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/174 (45%), Positives = 106/174 (60%), Gaps = 11/174 (6%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F+ ++ ++E D T +AA SPL LF I GV VFFG+DFITVTK D
Sbjct: 14 LKFLPGKEVLIEGTADFRDAETARAA--SPLAARLFDIPGVTGVFFGYDFITVTK--DGP 69
Query: 81 DWKLLKPEIFATIMDFFSSGLPVL-------TDAQPSSDTVIHEDDDETVQMIKELLDTR 133
DW+ LKP I IM+ F SG PV+ TD + + D E V IKELLDTR
Sbjct: 70 DWQHLKPAILGAIMEQFMSGAPVMASGGQAATDRADQAGEFYDKADSEIVITIKELLDTR 129
Query: 134 IRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+RP V +DGGDI F ++ G V L M+G+C CPSS TLK+G+QN+L+ ++PE
Sbjct: 130 VRPAVAQDGGDITFRGYENGTVFLHMKGACAGCPSSTATLKHGIQNLLRHFVPE 183
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F +++G +
Sbjct: 122 IKELLDTRVRPAVAQDGGDITFRGYENGTV 151
>gi|167643992|ref|YP_001681655.1| scaffold protein Nfu/NifU [Caulobacter sp. K31]
gi|167346422|gb|ABZ69157.1| Scaffold protein Nfu/NifU [Caulobacter sp. K31]
Length = 189
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 100/156 (64%), Gaps = 6/156 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F T + SPL + LFR+ V VFFG DF+TVTK + +W LK I A IMD F+
Sbjct: 29 EFKTAEEGDASPLAEALFRLGDVNRVFFGPDFLTVTKAEG-AEWPHLKAPILAAIMDHFT 87
Query: 99 SGLPVLTDAQPS---SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GG 153
SG P+L D S +D V E+ + V IK+LLDTRIRP V +DGGDI F F+ G
Sbjct: 88 SGRPLLLDQAESGHDNDGVYDEETSQIVAEIKDLLDTRIRPAVAQDGGDIVFSKFEPATG 147
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
VV L M+G+C+ CPSS TLK GV+NML+ Y+PE T
Sbjct: 148 VVWLHMRGACSGCPSSSATLKAGVENMLKHYVPEVT 183
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQ 27
IK+LLDTRIRP V +DGGDI F F+
Sbjct: 118 IKDLLDTRIRPAVAQDGGDIVFSKFE 143
>gi|225563079|gb|EEH11358.1| HIRA-interacting protein [Ajellomyces capsulatus G186AR]
Length = 314
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/149 (48%), Positives = 101/149 (67%), Gaps = 9/149 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
Y SPL L ++GV +VF+G DFIT+TK D +W +KPE+F+ I + ++G P++
Sbjct: 123 YPSPLAAKLLNVDGVSAVFYGPDFITITKAGD-ANWAHIKPEVFSLITEAVTTGEPIINV 181
Query: 106 ------DAQPSSDTV-IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
D++ +EDDDE V MIKELL+TRIRP +QEDGGDI+F F+ G+V LK
Sbjct: 182 AEAGAGAGPAEEDSLSYNEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGIVSLK 241
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++G+C +C SS VTLKNG+++ML YI E
Sbjct: 242 LRGACRTCDSSTVTLKNGIESMLMHYIEE 270
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F+DG++
Sbjct: 208 MIKELLETRIRPAIQEDGGDIEFRGFEDGIV 238
>gi|163797123|ref|ZP_02191078.1| nitrogen-fixing NifU-like protein [alpha proteobacterium BAL199]
gi|159177639|gb|EDP62192.1| nitrogen-fixing NifU-like protein [alpha proteobacterium BAL199]
Length = 187
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/152 (47%), Positives = 99/152 (65%), Gaps = 2/152 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + SPL + LF+++GV VF G+DFI+V+K D +W L+KP + IM+
Sbjct: 27 TAEFKSEDETARSPLAQALFQVDGVTGVFLGYDFISVSKHDGK-EWYLMKPGVLGVIMEH 85
Query: 97 FSSGLP-VLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
F +G P ++ D +S +D E V IKELLDTR+RP V DGGDI F ++ GVV
Sbjct: 86 FVAGRPTIVEDGASASAPEDAGEDTEIVSQIKELLDTRVRPAVAMDGGDITFQGYEDGVV 145
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L+MQG+C+ CPSS TLK G++NML+ YIPE
Sbjct: 146 TLQMQGACSGCPSSTATLKMGIENMLRHYIPE 177
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V DGGDI F ++DGV+
Sbjct: 116 IKELLDTRVRPAVAMDGGDITFQGYEDGVV 145
>gi|23501052|ref|NP_697179.1| NifU-like protein [Brucella suis 1330]
gi|62289118|ref|YP_220911.1| NifU-like protein [Brucella abortus bv. 1 str. 9-941]
gi|82699057|ref|YP_413631.1| nitrogen-fixing NifU, C-terminal [Brucella melitensis biovar
Abortus 2308]
gi|148560296|ref|YP_001258173.1| NifU-like protein [Brucella ovis ATCC 25840]
gi|161618129|ref|YP_001592016.1| HIRA-interacting protein 5 [Brucella canis ATCC 23365]
gi|189023393|ref|YP_001934161.1| Nitrogen-fixing NifU, C-terminal [Brucella abortus S19]
gi|225851675|ref|YP_002731908.1| NifU-like protein [Brucella melitensis ATCC 23457]
gi|237814609|ref|ZP_04593607.1| NifU-related protein [Brucella abortus str. 2308 A]
gi|256264815|ref|ZP_05467347.1| nitrogen-fixing NifU [Brucella melitensis bv. 2 str. 63/9]
gi|256368604|ref|YP_003106110.1| NifU-related protein [Brucella microti CCM 4915]
gi|260546415|ref|ZP_05822155.1| nitrogen-fixing NifU [Brucella abortus NCTC 8038]
gi|260567221|ref|ZP_05837691.1| nitrogen-fixing NifU [Brucella suis bv. 4 str. 40]
gi|260755996|ref|ZP_05868344.1| scaffold protein Nfu/NifU [Brucella abortus bv. 6 str. 870]
gi|260759220|ref|ZP_05871568.1| scaffold protein Nfu/NifU [Brucella abortus bv. 4 str. 292]
gi|260760942|ref|ZP_05873285.1| scaffold protein Nfu/NifU [Brucella abortus bv. 2 str. 86/8/59]
gi|260885016|ref|ZP_05896630.1| scaffold protein Nfu/NifU [Brucella abortus bv. 9 str. C68]
gi|261215272|ref|ZP_05929553.1| scaffold protein Nfu/NifU [Brucella abortus bv. 3 str. Tulya]
gi|261324254|ref|ZP_05963451.1| scaffold protein Nfu/NifU [Brucella neotomae 5K33]
gi|261751468|ref|ZP_05995177.1| scaffold protein Nfu/NifU [Brucella suis bv. 5 str. 513]
gi|261756030|ref|ZP_05999739.1| scaffold protein Nfu/NifU [Brucella suis bv. 3 str. 686]
gi|265983318|ref|ZP_06096053.1| scaffold protein Nfu/NifU [Brucella sp. 83/13]
gi|265994085|ref|ZP_06106642.1| scaffold protein Nfu/NifU [Brucella melitensis bv. 3 str. Ether]
gi|297247534|ref|ZP_06931252.1| thioredoxin-like protein [Brucella abortus bv. 5 str. B3196]
gi|306839588|ref|ZP_07472392.1| NifU-related protein [Brucella sp. NF 2653]
gi|306842572|ref|ZP_07475223.1| NifU-related protein [Brucella sp. BO2]
gi|306844409|ref|ZP_07476999.1| NifU-related protein [Brucella inopinata BO1]
gi|376271949|ref|YP_005150527.1| NifU-like protein [Brucella abortus A13334]
gi|376275086|ref|YP_005115525.1| NifU-like protein [Brucella canis HSK A52141]
gi|376279840|ref|YP_005153846.1| NifU-like protein [Brucella suis VBI22]
gi|384210508|ref|YP_005599590.1| NifU-like protein [Brucella melitensis M5-90]
gi|384223834|ref|YP_005614998.1| NifU-like protein [Brucella suis 1330]
gi|384407614|ref|YP_005596235.1| Nitrogen-fixing NifU, C-terminal protein, partial [Brucella
melitensis M28]
gi|384444229|ref|YP_005602948.1| NifU-like protein [Brucella melitensis NI]
gi|423167718|ref|ZP_17154421.1| hypothetical protein M17_01408 [Brucella abortus bv. 1 str. NI435a]
gi|423169906|ref|ZP_17156581.1| hypothetical protein M19_00439 [Brucella abortus bv. 1 str. NI474]
gi|423175103|ref|ZP_17161772.1| hypothetical protein M1A_02499 [Brucella abortus bv. 1 str. NI486]
gi|423178046|ref|ZP_17164691.1| hypothetical protein M1E_02287 [Brucella abortus bv. 1 str. NI488]
gi|423179339|ref|ZP_17165980.1| hypothetical protein M1G_00439 [Brucella abortus bv. 1 str. NI010]
gi|423182469|ref|ZP_17169106.1| hypothetical protein M1I_00438 [Brucella abortus bv. 1 str. NI016]
gi|423186588|ref|ZP_17173202.1| hypothetical protein M1K_01406 [Brucella abortus bv. 1 str. NI021]
gi|423190974|ref|ZP_17177582.1| hypothetical protein M1M_02654 [Brucella abortus bv. 1 str. NI259]
gi|23346918|gb|AAN29094.1| NifU-related protein [Brucella suis 1330]
gi|62195250|gb|AAX73550.1| NifU-related protein [Brucella abortus bv. 1 str. 9-941]
gi|82615158|emb|CAJ10095.1| Nitrogen-fixing NifU, C-terminal [Brucella melitensis biovar
Abortus 2308]
gi|148371553|gb|ABQ61532.1| NifU-related protein [Brucella ovis ATCC 25840]
gi|161334940|gb|ABX61245.1| HIRA-interacting protein 5 [Brucella canis ATCC 23365]
gi|189018965|gb|ACD71687.1| Nitrogen-fixing NifU, C-terminal [Brucella abortus S19]
gi|225640040|gb|ACN99953.1| NifU-related protein [Brucella melitensis ATCC 23457]
gi|237789446|gb|EEP63656.1| NifU-related protein [Brucella abortus str. 2308 A]
gi|255998762|gb|ACU47161.1| NifU-related protein [Brucella microti CCM 4915]
gi|260096522|gb|EEW80398.1| nitrogen-fixing NifU [Brucella abortus NCTC 8038]
gi|260156739|gb|EEW91819.1| nitrogen-fixing NifU [Brucella suis bv. 4 str. 40]
gi|260669538|gb|EEX56478.1| scaffold protein Nfu/NifU [Brucella abortus bv. 4 str. 292]
gi|260671374|gb|EEX58195.1| scaffold protein Nfu/NifU [Brucella abortus bv. 2 str. 86/8/59]
gi|260676104|gb|EEX62925.1| scaffold protein Nfu/NifU [Brucella abortus bv. 6 str. 870]
gi|260874544|gb|EEX81613.1| scaffold protein Nfu/NifU [Brucella abortus bv. 9 str. C68]
gi|260916879|gb|EEX83740.1| scaffold protein Nfu/NifU [Brucella abortus bv. 3 str. Tulya]
gi|261300234|gb|EEY03731.1| scaffold protein Nfu/NifU [Brucella neotomae 5K33]
gi|261741221|gb|EEY29147.1| scaffold protein Nfu/NifU [Brucella suis bv. 5 str. 513]
gi|261745783|gb|EEY33709.1| scaffold protein Nfu/NifU [Brucella suis bv. 3 str. 686]
gi|262765066|gb|EEZ10987.1| scaffold protein Nfu/NifU [Brucella melitensis bv. 3 str. Ether]
gi|263095225|gb|EEZ18894.1| nitrogen-fixing NifU [Brucella melitensis bv. 2 str. 63/9]
gi|264661910|gb|EEZ32171.1| scaffold protein Nfu/NifU [Brucella sp. 83/13]
gi|297174703|gb|EFH34050.1| thioredoxin-like protein [Brucella abortus bv. 5 str. B3196]
gi|306275222|gb|EFM56972.1| NifU-related protein [Brucella inopinata BO1]
gi|306287428|gb|EFM58908.1| NifU-related protein [Brucella sp. BO2]
gi|306405286|gb|EFM61561.1| NifU-related protein [Brucella sp. NF 2653]
gi|326408161|gb|ADZ65226.1| Nitrogen-fixing NifU, C-terminal protein [Brucella melitensis M28]
gi|326537871|gb|ADZ86086.1| NifU-related protein [Brucella melitensis M5-90]
gi|343382014|gb|AEM17506.1| NifU-related protein [Brucella suis 1330]
gi|349742225|gb|AEQ07768.1| NifU-related protein [Brucella melitensis NI]
gi|358257439|gb|AEU05174.1| NifU-related protein [Brucella suis VBI22]
gi|363399555|gb|AEW16525.1| NifU-related protein [Brucella abortus A13334]
gi|363403653|gb|AEW13948.1| NifU-related protein [Brucella canis HSK A52141]
gi|374537334|gb|EHR08847.1| hypothetical protein M1A_02499 [Brucella abortus bv. 1 str. NI486]
gi|374541152|gb|EHR12651.1| hypothetical protein M17_01408 [Brucella abortus bv. 1 str. NI435a]
gi|374542142|gb|EHR13631.1| hypothetical protein M19_00439 [Brucella abortus bv. 1 str. NI474]
gi|374547530|gb|EHR18984.1| hypothetical protein M1E_02287 [Brucella abortus bv. 1 str. NI488]
gi|374550858|gb|EHR22293.1| hypothetical protein M1G_00439 [Brucella abortus bv. 1 str. NI010]
gi|374551315|gb|EHR22749.1| hypothetical protein M1I_00438 [Brucella abortus bv. 1 str. NI016]
gi|374553664|gb|EHR25078.1| hypothetical protein M1M_02654 [Brucella abortus bv. 1 str. NI259]
gi|374558267|gb|EHR29661.1| hypothetical protein M1K_01406 [Brucella abortus bv. 1 str. NI021]
Length = 190
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 103/172 (59%), Gaps = 10/172 (5%)
Query: 24 ISFQDGVLEEPGQTIDFP-TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
+ F G + P T DF A SPL LF + GV VFFG+DFITVTK+D + W
Sbjct: 14 LKFLPGKVVMPEGTADFRDPASAENTSPLAAKLFAVPGVTGVFFGYDFITVTKEDGE--W 71
Query: 83 KLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIH-------EDDDETVQMIKELLDTRIR 135
+ LKP I TIM+ F SG P + + H E D E V+ IKEL++TR+R
Sbjct: 72 QHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHGEEEFFDEADTEIVETIKELIETRVR 131
Query: 136 PTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
P V +DGGDI F F+ G V L M+G+C+ CPSS TLK+G+QN+L+ ++PE
Sbjct: 132 PAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLRHFVPE 183
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++TR+RP V +DGGDI F F++G +
Sbjct: 122 IKELIETRVRPAVAQDGGDITFRGFENGTV 151
>gi|392572099|gb|EIW65271.1| HIRA-interacting protein 5 [Trametes versicolor FP-101664 SS1]
Length = 220
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 104/157 (66%), Gaps = 7/157 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F ++A SPL L IEGV VF+G DF+TV+K D + W ++KPE++A +M+
Sbjct: 27 TAEFLDIKSALKSPLAIRLMGIEGVTEVFYGPDFVTVSK-DAETAWSVIKPEVYAMLMEH 85
Query: 97 FSSGLPVLTDAQPSS-----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
FSSG P+ + DT I + D ETV MIKELL+TR+RP + EDGGDI++ F
Sbjct: 86 FSSGEPLFRSEEDRESAGPQDTRILDTDSETVAMIKELLETRVRPAIMEDGGDIEYRDFT 145
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V+LK++GSC C SS VTLK+G++ ML YIPE
Sbjct: 146 DDGIVQLKLKGSCRGCSSSTVTLKSGIERMLVHYIPE 182
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TR+RP + EDGGDI++ F D
Sbjct: 119 MIKELLETRVRPAIMEDGGDIEYRDFTD 146
>gi|115522240|ref|YP_779151.1| NifU domain-containing protein [Rhodopseudomonas palustris BisA53]
gi|115516187|gb|ABJ04171.1| nitrogen-fixing NifU domain protein [Rhodopseudomonas palustris
BisA53]
Length = 188
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 103/157 (65%), Gaps = 8/157 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F AA SPL + LF + GV VF+G DF++VTK DD DW+ LKP I IM+
Sbjct: 27 TMEFSDRAAAARSPLAERLFEVPGVTGVFYGLDFVSVTK--DDGDWQHLKPAILGAIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTVIHED------DDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F SG P++ D + + +D D ETV +IK+L++TR+RP V DGGDI F F
Sbjct: 85 FMSGEPLMADGRVDGEDASEDDEFFEKADTETVVIIKDLIETRVRPAVANDGGDIIFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G+V L M+G+C+ CPSS TL++G+QN+L+ ++PE
Sbjct: 145 KDGIVYLHMRGACSGCPSSTATLQHGIQNLLKHFVPE 181
Score = 42.7 bits (99), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+L++TR+RP V DGGDI F F+DG++
Sbjct: 119 IIKDLIETRVRPAVANDGGDIIFRGFKDGIV 149
>gi|254470949|ref|ZP_05084352.1| nitrogen fixation protein [Pseudovibrio sp. JE062]
gi|374328843|ref|YP_005079027.1| NifU-like protein [Pseudovibrio sp. FO-BEG1]
gi|211960091|gb|EEA95288.1| nitrogen fixation protein [Pseudovibrio sp. JE062]
gi|359341631|gb|AEV35005.1| NifU-like protein [Pseudovibrio sp. FO-BEG1]
Length = 186
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 106/168 (63%), Gaps = 6/168 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + P T DF + + A SPL + LF I GV +FFGHDFITVTK D+ DW+
Sbjct: 14 LKFLPGRVVLPEGTRDFRSAEEAAISPLAEKLFSIPGVVGIFFGHDFITVTK--DETDWQ 71
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTV----IHEDDDETVQMIKELLDTRIRPTVQ 139
++P I IM+ F + P+L + + +D+ETV MIKELL+TR+RP V
Sbjct: 72 HMRPAILGAIMENFMANTPILKGEETGDGDIGEEFFDAEDEETVTMIKELLETRVRPAVA 131
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+DGGDI F ++ G+V L M+G+C CPSS TL +G+QN+++ +IPE
Sbjct: 132 QDGGDITFRGYREGIVYLSMRGACAGCPSSTATLSHGIQNLMRHFIPE 179
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TR+RP V +DGGDI F +++G++
Sbjct: 117 MIKELLETRVRPAVAQDGGDITFRGYREGIV 147
>gi|395779462|ref|ZP_10459934.1| hypothetical protein MCW_00021 [Bartonella washoensis 085-0475]
gi|423712510|ref|ZP_17686812.1| hypothetical protein MCQ_01272 [Bartonella washoensis Sb944nv]
gi|395412037|gb|EJF78552.1| hypothetical protein MCQ_01272 [Bartonella washoensis Sb944nv]
gi|395420523|gb|EJF86798.1| hypothetical protein MCW_00021 [Bartonella washoensis 085-0475]
Length = 192
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 95/151 (62%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I V VF G+DFITVTKQD + W+ LKP I TIM+ F S PV
Sbjct: 35 EAAKNSPLAAKLFNIPNVSGVFLGYDFITVTKQDGE--WQHLKPAILGTIMEHFLSNDPV 92
Query: 104 LTDAQPS-------SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+T S ++ E D + V IKELL+TR+RP V DGGDI F F+ G+V
Sbjct: 93 ITTNATSQAQTHALNEEFYDEKDADIVLTIKELLETRVRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLKNG++N+L+ +IPE
Sbjct: 153 LNMRGACAGCPSSTATLKNGIENLLRHFIPE 183
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELL+TR+RP V DGGDI F F++G+ L G P+ A + + LL
Sbjct: 122 IKELLETRVRPAVANDGGDITFRGFENGIVYLNMRGACAGCPSSTATLKNGIENLL 177
>gi|189200054|ref|XP_001936364.1| HIRA-interacting protein 5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983463|gb|EDU48951.1| HIRA-interacting protein 5 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 312
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 97/152 (63%), Gaps = 12/152 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL L I+G+ SVFFG D+ITVTK D W +KPE+FA I ++ +SG P++
Sbjct: 114 HPSPLAAQLMNIDGITSVFFGADYITVTK-DSSTPWAHIKPEVFALINEYMTSGQPIVNT 172
Query: 107 -----------AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
Q + E+DDE V MIKELL+TR+RP +QEDGGDI+F F G V
Sbjct: 173 VAAKAGEQGQGGQENDSLAYDENDDEVVGMIKELLETRVRPAIQEDGGDIEFRGFNDGQV 232
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 233 WLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 264
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TR+RP +QEDGGDI+F F DG
Sbjct: 202 MIKELLETRVRPAIQEDGGDIEFRGFNDG 230
>gi|154291187|ref|XP_001546179.1| NifU-like protein [Botryotinia fuckeliana B05.10]
gi|347441876|emb|CCD34797.1| similar to HIRA-interacting protein 5 [Botryotinia fuckeliana]
Length = 313
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/150 (49%), Positives = 101/150 (67%), Gaps = 10/150 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL-- 104
Y SPL L I+GVKSVF+G +FITVTK +D +W +KPE+F+ I + +SG ++
Sbjct: 120 YPSPLAASLMNIDGVKSVFYGANFITVTKVED-ANWAHIKPEVFSLITEAVTSGAQIVNI 178
Query: 105 -----TDAQPSSDTVI--HEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKL 157
+P + + +EDD E V MIKELL+TRIRP +QEDGGDI + F+ G+VKL
Sbjct: 179 TERTGASGEPEEEDSLAYNEDDPEVVGMIKELLETRIRPAIQEDGGDIDYRGFEDGLVKL 238
Query: 158 KMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
K++G+C +C SS VTLKNG++ ML YI E
Sbjct: 239 KLRGACRTCDSSTVTLKNGIEGMLMHYIEE 268
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRP +QEDGGDI + F+DG+++
Sbjct: 206 MIKELLETRIRPAIQEDGGDIDYRGFEDGLVK 237
>gi|429769472|ref|ZP_19301581.1| NifU-like protein [Brevundimonas diminuta 470-4]
gi|429186993|gb|EKY27916.1| NifU-like protein [Brevundimonas diminuta 470-4]
Length = 195
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 74/157 (47%), Positives = 101/157 (64%), Gaps = 5/157 (3%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
Q++++ T A SPL + LF +EGV+ VFFG D+++VT+ D DW +K I + +MD
Sbjct: 35 QSLEYRTIDEAAASPLAEALFELEGVEGVFFGADYVSVTRAADGPDWTAMKAPILSVVMD 94
Query: 96 FFSSGLP-VLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
F SG P V A+ +SD D E V IK LLDTRIRP V +DGGDI F F +
Sbjct: 95 HFVSGAPLVRAGAEAASDD--GTADSEIVAEIKGLLDTRIRPAVAQDGGDILFDHFDEET 152
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
GV++L+M+G+C CPSS TLK GV+ M++ Y+PE T
Sbjct: 153 GVLRLRMRGACAGCPSSSATLKAGVEQMMRHYVPEVT 189
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 23/33 (69%), Gaps = 2/33 (6%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD--GVLE 32
IK LLDTRIRP V +DGGDI F F + GVL
Sbjct: 124 IKGLLDTRIRPAVAQDGGDILFDHFDEETGVLR 156
>gi|91974729|ref|YP_567388.1| nitrogen-fixing NifU-like protein [Rhodopseudomonas palustris
BisB5]
gi|91681185|gb|ABE37487.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris BisB5]
Length = 188
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 100/153 (65%), Gaps = 6/153 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F + A SPL + LF +EGV VF+G DF+TVTK D DW+ LKP I IM+
Sbjct: 27 TMEFTDRKQAARSPLAERLFEVEGVSGVFYGSDFVTVTK-DGAGDWQHLKPAILGAIMEH 85
Query: 97 FSSGLPVLTDA-----QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
+ SG P++ D + D E D ETV++IK+L++TR+RP V DGGDI F F+
Sbjct: 86 YMSGAPIMADGRVDGDETDEDEFFAERDAETVEIIKDLIETRVRPAVANDGGDITFRGFK 145
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFY 184
GVV L M+G+C+ CPSS TL++G+QN+L+ +
Sbjct: 146 DGVVYLAMKGACSGCPSSTATLQHGIQNLLKHF 178
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+L++TR+RP V DGGDI F F+DGV+
Sbjct: 119 IIKDLIETRVRPAVANDGGDITFRGFKDGVV 149
>gi|399070221|ref|ZP_10749696.1| thioredoxin-like protein [Caulobacter sp. AP07]
gi|398044427|gb|EJL37246.1| thioredoxin-like protein [Caulobacter sp. AP07]
Length = 189
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 100/156 (64%), Gaps = 6/156 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F T SPL + LFR+ V VFFG DF+TVTK + +W LK I A IMD F+
Sbjct: 29 EFKTAAEGDASPLAEALFRLGDVNRVFFGPDFLTVTKAEH-AEWPHLKAPILAAIMDHFT 87
Query: 99 SGLPVLTDAQPS---SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GG 153
SG P+L DA S +D V ++ + V IK+LLDTRIRP V +DGGDI F F+ G
Sbjct: 88 SGRPLLLDAVESGHDNDGVYDDETSQIVAEIKDLLDTRIRPAVAQDGGDIVFSRFEPATG 147
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
VV L M+G+C+ CPSS TLK GV+NML+ Y+PE T
Sbjct: 148 VVWLHMRGACSGCPSSSATLKAGVENMLKHYVPEVT 183
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQ 27
IK+LLDTRIRP V +DGGDI F F+
Sbjct: 118 IKDLLDTRIRPAVAQDGGDIVFSRFE 143
>gi|340776902|ref|ZP_08696845.1| nitrogen fixing thioredoxin-like protein NifU [Acetobacter aceti
NBRC 14818]
Length = 187
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/168 (47%), Positives = 108/168 (64%), Gaps = 4/168 (2%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQA-AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDD 79
++F+ +D V E G TIDF A A S L + LF + GV VF G DF++VTK D +
Sbjct: 14 LKFLPGRD-VTGEAG-TIDFIDADAVAGRSLLAEALFELPGVSRVFMGSDFVSVTKADSE 71
Query: 80 VDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
DW LKP + + ++D F SG P + S + + D+E VQ IKELL+TR+RP V
Sbjct: 72 -DWAELKPLVLSALVDHFVSGRPTVEVGAASVEDPVMPGDEEIVQQIKELLETRVRPAVA 130
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI F ++ G+V+L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 131 SDGGDIVFRGYREGIVRLSMQGACSGCPSSGATLKHGVENMLRHYVPE 178
Score = 42.7 bits (99), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V DGGDI F +++G++
Sbjct: 117 IKELLETRVRPAVASDGGDIVFRGYREGIV 146
>gi|288959669|ref|YP_003450010.1| thioredoxin [Azospirillum sp. B510]
gi|288911977|dbj|BAI73466.1| thioredoxin [Azospirillum sp. B510]
Length = 185
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 99/152 (65%), Gaps = 2/152 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + A SPL + LF IEGV VF G DFIT+TK D DW LLKP I IM+
Sbjct: 27 TADFTGREDAARSPLAQRLFEIEGVVGVFLGADFITITKTDAR-DWFLLKPSILGVIMEH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDET-VQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
F++ PVL + DDE V+ IKELLDTR+RP+V +DGGDI F F+ GVV
Sbjct: 86 FTADRPVLLEEGGDGHAAAASADDEEIVEQIKELLDTRVRPSVAQDGGDITFQGFERGVV 145
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C+ CPSS TLK+G++NML+ YIPE
Sbjct: 146 YLAMKGACSGCPSSTATLKHGIENMLRHYIPE 177
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP+V +DGGDI F F+ GV+
Sbjct: 116 IKELLDTRVRPSVAQDGGDITFQGFERGVV 145
>gi|322710719|gb|EFZ02293.1| NifU-like protein [Metarhizium anisopliae ARSEF 23]
Length = 297
Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/162 (48%), Positives = 101/162 (62%), Gaps = 14/162 (8%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L I+G+ SVF+G DFITVTK D +W ++PEIFA I
Sbjct: 109 PRSTISPP-----YPSPLAAKLMNIDGITSVFYGADFITVTKAGD-ANWAHVRPEIFALI 162
Query: 94 MDFFSSGLPVLTDAQPSS--------DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
+ +SG +++ A+ +E+D E V MIKELL+TRIRP +QEDGGDI
Sbjct: 163 TEAITSGETIVSIAERKEGDEDIEEDSLAYNENDSEVVGMIKELLETRIRPAIQEDGGDI 222
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+F F G VKLK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 223 EFRGFDDGYVKLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 264
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 27/32 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRP +QEDGGDI+F F DG ++
Sbjct: 202 MIKELLETRIRPAIQEDGGDIEFRGFDDGYVK 233
>gi|349701076|ref|ZP_08902705.1| nitrogen fixing thioredoxin-like protein [Gluconacetobacter
europaeus LMG 18494]
Length = 187
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 106/155 (68%), Gaps = 4/155 (2%)
Query: 35 GQTIDFPT-GQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
G T DF + A S L +LLF ++GV VFFG+DF+ VT+ D + W L+P++ + +
Sbjct: 26 GATADFISPDSVAGRSRLAELLFDLDGVARVFFGNDFVAVTRSDA-MQWDDLRPQVLSVL 84
Query: 94 MDFFSSGLPVL-TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
D+ ++ PV+ +DAQ D +I D+E VQ IKELLDTR+RP V DGGDI F ++
Sbjct: 85 ADYLATEQPVVESDAQVVED-LIAPGDEEIVQQIKELLDTRVRPAVAGDGGDIVFRGYRD 143
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVV+L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 144 GVVRLTMQGACSGCPSSRATLKHGVENMLRHYVPE 178
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELLDTR+RP V DGGDI F ++DGV+
Sbjct: 117 IKELLDTRVRPAVAGDGGDIVFRGYRDGVVR 147
>gi|294851540|ref|ZP_06792213.1| thioredoxin-like protein [Brucella sp. NVSL 07-0026]
gi|294820129|gb|EFG37128.1| thioredoxin-like protein [Brucella sp. NVSL 07-0026]
Length = 190
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 103/172 (59%), Gaps = 10/172 (5%)
Query: 24 ISFQDGVLEEPGQTIDFP-TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
+ F G + P T DF A SPL LF + GV VFFG+DFITVTK+D + W
Sbjct: 14 LKFLPGKVVMPEGTADFRDPASAENTSPLAAKLFVVPGVTGVFFGYDFITVTKEDGE--W 71
Query: 83 KLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIH-------EDDDETVQMIKELLDTRIR 135
+ LKP I TIM+ F SG P + + H E D E V+ IKEL++TR+R
Sbjct: 72 QHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHGEEEFFDEADTEIVETIKELIETRVR 131
Query: 136 PTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
P V +DGGDI F F+ G V L M+G+C+ CPSS TLK+G+QN+L+ ++PE
Sbjct: 132 PAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLRHFVPE 183
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++TR+RP V +DGGDI F F++G +
Sbjct: 122 IKELIETRVRPAVAQDGGDITFRGFENGTV 151
>gi|114706882|ref|ZP_01439782.1| nitrogen fixation protein [Fulvimarina pelagi HTCC2506]
gi|114537830|gb|EAU40954.1| nitrogen fixation protein [Fulvimarina pelagi HTCC2506]
Length = 187
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 97/148 (65%), Gaps = 6/148 (4%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF ++GV VFFG DF+TVTK D DW LKP I A +M+ F + PV
Sbjct: 35 EAAQRSPLAARLFEVDGVTGVFFGFDFVTVTK--DQGDWAHLKPAILAGLMEHFVANRPV 92
Query: 104 LTDAQPSS----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
+ + + + E D ETV IKEL++TR+RP V +DGGDI F ++ G+V L M
Sbjct: 93 MAETSAMNSEPGEEFFDEGDKETVATIKELIETRVRPAVAQDGGDITFRGYRDGIVYLNM 152
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+G+C+ CPSS TLK+G+QN+L+ ++PE
Sbjct: 153 RGACSGCPSSTATLKHGIQNLLRHFVPE 180
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++TR+RP V +DGGDI F ++DG++
Sbjct: 119 IKELIETRVRPAVAQDGGDITFRGYRDGIV 148
>gi|227820624|ref|YP_002824594.1| scaffold protein Nfu/NifU [Sinorhizobium fredii NGR234]
gi|227339623|gb|ACP23841.1| putative scaffold protein Nfu/NifU [Sinorhizobium fredii NGR234]
Length = 188
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 98/149 (65%), Gaps = 7/149 (4%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A SPL LF I GV V+FG+DFITV+K+ + W+ LKP + +IM+ F SG P+
Sbjct: 35 EARTGSPLAARLFSIPGVSGVYFGYDFITVSKEGQE--WQHLKPAVLGSIMEHFMSGQPI 92
Query: 104 LTDAQPSSDT-----VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
++ A + +T E D+ V IKELLDTR+RP V +DGGDI F F+ G V L
Sbjct: 93 MSGASRAEETDQEGEFYDEGDEAIVATIKELLDTRVRPAVAQDGGDITFRGFKDGTVFLN 152
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
M+G+C+ CPSS TL++GVQN+L+ ++PE
Sbjct: 153 MKGACSGCPSSTATLRHGVQNLLRHFVPE 181
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F+DG +
Sbjct: 120 IKELLDTRVRPAVAQDGGDITFRGFKDGTV 149
>gi|23006361|ref|ZP_00048716.1| COG0694: Thioredoxin-like proteins and domains [Magnetospirillum
magnetotacticum MS-1]
Length = 184
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 97/154 (62%), Gaps = 4/154 (2%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T + +A SPL LF + GV V+FGHDFI+VTK D +W +KP + IMD
Sbjct: 23 TFEARDASSAERSPLASALFAVPGVSGVYFGHDFISVTKADGVNEWPQVKPAVLGAIMDH 82
Query: 97 FSSGLPVLTD----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
F SG PVL + A+ ++ E D +TV IK+LL+TR+RP V DGGDI F ++
Sbjct: 83 FQSGRPVLAEGTALAEDDAEEFYDEADHDTVATIKDLLETRVRPAVAGDGGDITFRGYRD 142
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
G+V L+M+G+C+ CPSS TL+ GVQN+ + ++P
Sbjct: 143 GIVYLEMKGACSGCPSSTATLRQGVQNLFRHFLP 176
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
IK+LL+TR+RP V DGGDI F ++DG+ LE G P+ A
Sbjct: 116 IKDLLETRVRPAVAGDGGDITFRGYRDGIVYLEMKGACSGCPSSTA 161
>gi|190571129|ref|YP_001975487.1| NifU domain-containing protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018533|ref|ZP_03334341.1| NifU domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|353328078|ref|ZP_08970405.1| NifU domain protein [Wolbachia endosymbiont wVitB of Nasonia
vitripennis]
gi|373450816|ref|ZP_09542777.1| putative iron-sulfur cluster scaffold, NifU-like (NifU domain)
[Wolbachia pipientis wAlbB]
gi|190357401|emb|CAQ54835.1| NifU domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995484|gb|EEB56124.1| NifU domain protein [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|371931989|emb|CCE77790.1| putative iron-sulfur cluster scaffold, NifU-like (NifU domain)
[Wolbachia pipientis wAlbB]
Length = 190
Score = 146 bits (369), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 105/160 (65%), Gaps = 6/160 (3%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G+T DF S L LF+IE V VFFGHDFI+VTK D ++W ++K EI TIM
Sbjct: 26 GETADFSNADEIKNSKLAVNLFQIEHVVRVFFGHDFISVTKSDR-MNWDIVKVEILTTIM 84
Query: 95 DFFSSGLPV-----LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
D F+SG ++D + + +E+D E V IKEL+++ I+P V +DGGDI+F
Sbjct: 85 DHFTSGGKAFDKEGVSDNKMLEEEFFNENDIEIVNRIKELMESYIKPAVAQDGGDIKFRG 144
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
++ G+V +++QG+C+ CPS+ +TLK GVQNML ++IPE +
Sbjct: 145 YKDGIVYVELQGACSGCPSAAITLKQGVQNMLSYHIPEVS 184
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL+++ I+P V +DGGDI+F ++DG++
Sbjct: 121 IKELMESYIKPAVAQDGGDIKFRGYKDGIV 150
>gi|398349934|ref|YP_006395398.1| scaffold protein Nfu/NifU [Sinorhizobium fredii USDA 257]
gi|390125260|gb|AFL48641.1| putative scaffold protein Nfu/NifU [Sinorhizobium fredii USDA 257]
Length = 188
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 98/149 (65%), Gaps = 7/149 (4%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A SPL LF I GV V+FG+DFITV+K+ + W+ LKP I +IM+ F SG P+
Sbjct: 35 EARAGSPLAVRLFSIPGVSGVYFGYDFITVSKEGQE--WQHLKPAILGSIMEHFMSGQPI 92
Query: 104 LTDAQPSSDT-----VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
++ A + +T E D+ V IKELLDTR+RP V +DGGDI F F+ G V L
Sbjct: 93 MSGASRAEETDQEGEFFDEGDEAIVATIKELLDTRVRPAVAQDGGDITFRGFKDGTVFLN 152
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
M+G+C+ CPSS TL++GVQN+L+ ++PE
Sbjct: 153 MKGACSGCPSSTATLRHGVQNLLRHFVPE 181
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F+DG +
Sbjct: 120 IKELLDTRVRPAVAQDGGDITFRGFKDGTV 149
>gi|322696539|gb|EFY88330.1| NifU-like protein [Metarhizium acridum CQMa 102]
Length = 297
Score = 146 bits (368), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 101/162 (62%), Gaps = 14/162 (8%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L I+G+ SVF+G DFITVTK D +W ++PEIFA I
Sbjct: 109 PRSTISPP-----YPSPLAAKLMNIDGITSVFYGADFITVTKAGD-ANWAHIRPEIFALI 162
Query: 94 MDFFSSGLPVLTDAQPSS--------DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
+ +SG +++ A+ +E+D E V MIKELL+TRIRP +QEDGGDI
Sbjct: 163 TEAITSGETIVSVAERKEGDEDIEEDSLAYNENDSEVVGMIKELLETRIRPAIQEDGGDI 222
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++ F G VKLK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 223 EYRGFDDGYVKLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 264
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 27/32 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRP +QEDGGDI++ F DG ++
Sbjct: 202 MIKELLETRIRPAIQEDGGDIEYRGFDDGYVK 233
>gi|225629714|ref|ZP_03787679.1| NifU domain protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591431|gb|EEH12506.1| NifU domain protein [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 194
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 103/166 (62%), Gaps = 7/166 (4%)
Query: 29 GVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPE 88
+L E G+T DF S L LF+IE V VFFGHDFI+VTK ++W LK E
Sbjct: 25 AILNE-GETADFSNADEIKNSKLAANLFQIEHVVRVFFGHDFISVTKLGG-INWDTLKVE 82
Query: 89 IFATIMDFFSSGLPVL-----TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGG 143
I TIMD F+SG L D S + E+D E V IKEL+++ I+P V +DGG
Sbjct: 83 ILTTIMDHFTSGGKALDKEGVNDNNISDEEFFDENDIEIVNRIKELMESYIKPAVAQDGG 142
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
DI+F ++ G+V +++QG+C+ CPS+ +TLK GVQNML ++IPE
Sbjct: 143 DIKFRGYKDGIVYVELQGACSGCPSAAITLKQGVQNMLSYHIPEVA 188
Score = 40.8 bits (94), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL+++ I+P V +DGGDI+F ++DG++
Sbjct: 125 IKELMESYIKPAVAQDGGDIKFRGYKDGIV 154
>gi|75674208|ref|YP_316629.1| nitrogen-fixing NifU [Nitrobacter winogradskyi Nb-255]
gi|74419078|gb|ABA03277.1| nitrogen-fixing NifU [Nitrobacter winogradskyi Nb-255]
Length = 190
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 100/155 (64%), Gaps = 8/155 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F + SPL LF + GV VF+G DFITVTK D+ DW+ LKP I IM+
Sbjct: 27 TMEFTSASTTARSPLAVKLFAVHGVAGVFYGSDFITVTK-DEGSDWQHLKPAILGVIMEH 85
Query: 97 FSSGLPVLTDAQPSSDT-------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
+ +G P+L D + S+ E D ETV +IK+L++TR+RP V +DGGDI F
Sbjct: 86 YMAGAPLLADGEGCSEANADSDVEFFDEADAETVTLIKDLIETRVRPGVADDGGDITFRG 145
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFY 184
F+ G+V + M+G+C+ CPSS VTL+NG+QN+L+ +
Sbjct: 146 FRDGIVYVNMKGACSGCPSSTVTLRNGIQNLLKHF 180
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 26/31 (83%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+L++TR+RP V +DGGDI F F+DG++
Sbjct: 121 LIKDLIETRVRPGVADDGGDITFRGFRDGIV 151
>gi|302409492|ref|XP_003002580.1| HIRA-interacting protein [Verticillium albo-atrum VaMs.102]
gi|261358613|gb|EEY21041.1| HIRA-interacting protein [Verticillium albo-atrum VaMs.102]
Length = 292
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 117/193 (60%), Gaps = 22/193 (11%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGV 61
+K L + R+ P +G + +I + + P TI P + SPL L I+GV
Sbjct: 79 LKFLPNHRVLP----EGISVPYIEYLN-----PRATIAPP-----HPSPLAAQLLAIDGV 124
Query: 62 KSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT------DAQPSSDTVI 115
+VF+G DFITVTK D +W ++ EIFA I + +SG P++ A D++
Sbjct: 125 TAVFYGADFITVTKAAD-ANWAHVRAEIFALITEAITSGAPLVVVKEGAEAAPAEEDSLA 183
Query: 116 H-EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLK 174
+ EDD E V MIKELL+TRIRP +QEDGGDI+F F+ GVV LK++G+C +C SS VTLK
Sbjct: 184 YNEDDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFEDGVVLLKLRGACRTCDSSTVTLK 243
Query: 175 NGVQNMLQFYIPE 187
NG++ ML YI E
Sbjct: 244 NGIEGMLMHYIEE 256
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F+DGV+
Sbjct: 194 MIKELLETRIRPAIQEDGGDIEFRGFEDGVV 224
>gi|49476032|ref|YP_034073.1| hypothetical protein BH13490 [Bartonella henselae str. Houston-1]
gi|49238840|emb|CAF28122.1| hypothetical protein BH13490 [Bartonella henselae str. Houston-1]
Length = 192
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 99/151 (65%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I V VFFG+DFITV+K++ + W+ LKP I TIM+ F SG PV
Sbjct: 35 EAAKNSPLAAKLFNIPNVNGVFFGYDFITVSKKEGE--WQHLKPAILGTIMEHFLSGDPV 92
Query: 104 L-TDAQPSSDT------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+ T+A + T +E D + V IKELL+TRIRP V DGGDI F F+ G+V
Sbjct: 93 INTNATRQAQTHALNEEFYNEKDADIVLTIKELLETRIRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 153 LNMRGACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TRIRP V DGGDI F F++G++
Sbjct: 122 IKELLETRIRPAVANDGGDITFRGFENGIV 151
>gi|330922033|ref|XP_003299669.1| hypothetical protein PTT_10711 [Pyrenophora teres f. teres 0-1]
gi|311326592|gb|EFQ92266.1| hypothetical protein PTT_10711 [Pyrenophora teres f. teres 0-1]
Length = 243
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 97/152 (63%), Gaps = 12/152 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
+ SPL L I+GV SVFFG D+ITVTK D W +KPE+FA I ++ +SG P++
Sbjct: 45 HPSPLAAQLMNIDGVTSVFFGADYITVTK-DSSTPWAHVKPEVFALINEYMTSGQPIVNT 103
Query: 106 ----------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
Q + E+DDE + MIKELL+TR+RP +QEDGGDI+F F G V
Sbjct: 104 VAAKAGEQGQGGQENDSLAYDENDDEVIGMIKELLETRVRPAIQEDGGDIEFRGFNDGQV 163
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 164 LLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 195
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TR+RP +QEDGGDI+F F DG
Sbjct: 133 MIKELLETRVRPAIQEDGGDIEFRGFNDG 161
>gi|349687357|ref|ZP_08898499.1| nitrogen fixing thioredoxin-like protein [Gluconacetobacter
oboediens 174Bp2]
Length = 187
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/155 (48%), Positives = 105/155 (67%), Gaps = 4/155 (2%)
Query: 35 GQTIDFPT-GQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
G T DF + A S L ++LF ++GV VFFG+DF+ VT+ D W L+P++ + +
Sbjct: 26 GATADFISPDSVAGRSRLAEILFDLDGVARVFFGNDFVAVTRSDA-TQWDDLRPQVLSVL 84
Query: 94 MDFFSSGLPVL-TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
D+ ++G V+ +DAQ D +I D+E VQ IKELLDTR+RP V DGGDI F ++
Sbjct: 85 ADYLATGQAVVESDAQVVED-LIAPGDEEIVQQIKELLDTRVRPAVAGDGGDIVFRGYRD 143
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GVV+L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 144 GVVRLTMQGACSGCPSSRATLKHGVENMLRHYVPE 178
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELLDTR+RP V DGGDI F ++DGV+
Sbjct: 117 IKELLDTRVRPAVAGDGGDIVFRGYRDGVVR 147
>gi|15887702|ref|NP_353383.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|335033083|ref|ZP_08526455.1| hypothetical protein AGRO_0425 [Agrobacterium sp. ATCC 31749]
gi|15155261|gb|AAK86168.1| conserved hypothetical protein [Agrobacterium fabrum str. C58]
gi|333795759|gb|EGL67084.1| hypothetical protein AGRO_0425 [Agrobacterium sp. ATCC 31749]
Length = 187
Score = 145 bits (367), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 99/156 (63%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F A SPL + LF I GV V+FG DFITVTK DD +W+ LKP I +IM+
Sbjct: 27 TVEFLNASQAQASPLAERLFTIPGVTGVYFGFDFITVTK--DDAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDET-----VQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
F SG P++ A + + + E V IKELLDTR+RP V +DGGDI F F+
Sbjct: 85 FMSGRPIMGTAIAAEVSDEEGEFFEEGDETIVATIKELLDTRVRPAVAQDGGDITFRGFR 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L M+G+C+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 DGTVFLNMKGACSGCPSSTATLKHGVQNLLRHFVPE 180
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F+DG +
Sbjct: 119 IKELLDTRVRPAVAQDGGDITFRGFRDGTV 148
>gi|58039243|ref|YP_191207.1| NifU protein [Gluconobacter oxydans 621H]
gi|58001657|gb|AAW60551.1| NifU protein [Gluconobacter oxydans 621H]
Length = 212
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 72/143 (50%), Positives = 93/143 (65%), Gaps = 1/143 (0%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
AA S L LF V+ VF G DF++VTK DD + W LKP + TI FF SG PVL
Sbjct: 62 AAGRSELASALFDQPNVRRVFLGGDFVSVTKSDD-ISWGDLKPVVLGTITTFFESGRPVL 120
Query: 105 TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCT 164
+ Q + + + +D E V I++LLDTR+RP V DGGDI F ++ GVV L MQG+C+
Sbjct: 121 SGTQAAPEHDVSPEDAEVVSRIQDLLDTRVRPAVAGDGGDIAFRGYKDGVVYLAMQGACS 180
Query: 165 SCPSSVVTLKNGVQNMLQFYIPE 187
CPSS TLK+GV+NML+ Y+PE
Sbjct: 181 GCPSSRATLKHGVENMLRHYVPE 203
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I++LLDTR+RP V DGGDI F ++DGV+
Sbjct: 142 IQDLLDTRVRPAVAGDGGDIAFRGYKDGVV 171
>gi|221232999|ref|YP_002515435.1| mitochondrial-type Fe-S cluster assembly protein NFU [Caulobacter
crescentus NA1000]
gi|220962171|gb|ACL93527.1| mitochondrial-type Fe-S cluster assembly protein NFU [Caulobacter
crescentus NA1000]
Length = 190
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 100/157 (63%), Gaps = 7/157 (4%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F T + SPL K LF + V VFFG DF+TVTK +D W LK I A IMD F+
Sbjct: 29 EFRTPEEGDASPLAKALFELGDVSRVFFGPDFLTVTK-GEDAQWPHLKAPILAAIMDHFT 87
Query: 99 SGLPVLTDAQPSSDTVIHED-DDETVQM---IKELLDTRIRPTVQEDGGDIQFISF--QG 152
SG P+L D S D D+ET Q+ IKELLDTRIRP V +DGGDI F F Q
Sbjct: 88 SGRPLLLDQTAESGGHDEGDYDEETSQIVAEIKELLDTRIRPAVAQDGGDIVFSRFEPQT 147
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
GVV L M+G+C+ CPSS TLK+GV+NML+ Y+PE T
Sbjct: 148 GVVWLHMRGACSGCPSSSATLKSGVENMLKHYVPEVT 184
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 21/26 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQ 27
IKELLDTRIRP V +DGGDI F F+
Sbjct: 119 IKELLDTRIRPAVAQDGGDIVFSRFE 144
>gi|389879378|ref|YP_006372943.1| thioredoxin [Tistrella mobilis KA081020-065]
gi|388530162|gb|AFK55359.1| thioredoxin [Tistrella mobilis KA081020-065]
Length = 181
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 96/148 (64%), Gaps = 2/148 (1%)
Query: 40 FPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSS 99
F G SPL L I+GV+ ++ G DF++VTK + DW LLKP I + IM+ F+S
Sbjct: 29 FARGDDTARSPLAGTLLAIDGVEGIYLGADFVSVTKSEQ-ADWMLLKPLILSDIMEHFTS 87
Query: 100 GLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
G PVLT + + D+DE I+EL+DTR+RP V +DGGDI F F G+V L+M
Sbjct: 88 GRPVLT-GEGDAAAAPAVDEDEVTATIRELIDTRVRPAVAQDGGDIVFEGFDHGIVYLQM 146
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+C+ CPSS +TLKNG++ ML+ Y+PE
Sbjct: 147 HGACSGCPSSTMTLKNGIETMLKHYVPE 174
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+EL+DTR+RP V +DGGDI F F G++
Sbjct: 113 IRELIDTRVRPAVAQDGGDIVFEGFDHGIV 142
>gi|395768062|ref|ZP_10448584.1| hypothetical protein MCS_01517 [Bartonella doshiae NCTC 12862]
gi|395412585|gb|EJF79072.1| hypothetical protein MCS_01517 [Bartonella doshiae NCTC 12862]
Length = 192
Score = 145 bits (366), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 96/151 (63%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I V SVFFG+DFITVTK+D + W+ LKP I TIM+ F S PV
Sbjct: 35 EAAKNSPLAAKLFNIPNVSSVFFGYDFITVTKKDGE--WQHLKPAILGTIMEHFLSNDPV 92
Query: 104 LTDA-------QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+T ++ E D + V IKELL+TRIRP V DGGDI F F+ G+V
Sbjct: 93 ITTTATTQAQNHAHNEEFYDEKDADIVLTIKELLETRIRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 153 LNMRGACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TRIRP V DGGDI F F++G++
Sbjct: 122 IKELLETRIRPAVANDGGDITFRGFENGIV 151
>gi|296817809|ref|XP_002849241.1| HIRA-interacting protein 5 [Arthroderma otae CBS 113480]
gi|238839694|gb|EEQ29356.1| HIRA-interacting protein 5 [Arthroderma otae CBS 113480]
Length = 304
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 103/158 (65%), Gaps = 13/158 (8%)
Query: 42 TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSG- 100
T Q Y SPL L ++GV SVFFG DFITVTK D D +W +KPE+F+ I + ++G
Sbjct: 111 TLQPPYPSPLAAKLLNVDGVVSVFFGSDFITVTK-DSDANWAHIKPEVFSLITEAITTGE 169
Query: 101 -LPVLTDAQPSSDTV----------IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
L + D +P + +E+D+E V MI+ELL+TRIRP +QEDGGDI+F
Sbjct: 170 ALINIVDVRPGKEGAEEAEMEEAVRYNEEDEEIVGMIQELLETRIRPAIQEDGGDIEFRG 229
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 230 FENGNVMLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 267
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI+ELL+TRIRP +QEDGGDI+F F++G
Sbjct: 205 MIQELLETRIRPAIQEDGGDIEFRGFENG 233
>gi|304393809|ref|ZP_07375734.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Ahrensia
sp. R2A130]
gi|303294008|gb|EFL88383.1| putative NFU1 iron-sulfur cluster scaffold-like protein [Ahrensia
sp. R2A130]
Length = 190
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 95/144 (65%), Gaps = 6/144 (4%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL-TDA 107
SPL LF I V VFFG+DF+T+TK +D DW+ +KP + IM+ F SG PV+ DA
Sbjct: 40 SPLAAGLFAIPSVSGVFFGYDFVTITK-NDTADWQHVKPAVLGVIMEHFMSGAPVMNADA 98
Query: 108 QPSSDTV----IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSC 163
++ + E +E V IKELL+TR+RP V +DGGDI F F+ G V LKM+G+C
Sbjct: 99 AGGTEVAPEGFVEEGSEEIVSTIKELLETRVRPAVAQDGGDITFHGFKDGRVYLKMRGAC 158
Query: 164 TSCPSSVVTLKNGVQNMLQFYIPE 187
CPSS TL++G+QN+L+ +IPE
Sbjct: 159 AGCPSSTATLQHGIQNLLKHFIPE 182
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELL+TR+RP V +DGGDI F F+DG
Sbjct: 121 IKELLETRVRPAVAQDGGDITFHGFKDG 148
>gi|16124317|ref|NP_418881.1| NifU-like domain-containing protein [Caulobacter crescentus CB15]
gi|13421157|gb|AAK22049.1| NifU-like domain protein [Caulobacter crescentus CB15]
Length = 224
Score = 145 bits (366), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 100/157 (63%), Gaps = 7/157 (4%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F T + SPL K LF + V VFFG DF+TVTK +D W LK I A IMD F+
Sbjct: 63 EFRTPEEGDASPLAKALFELGDVSRVFFGPDFLTVTK-GEDAQWPHLKAPILAAIMDHFT 121
Query: 99 SGLPVLTDAQPSSDTVIHED-DDETVQM---IKELLDTRIRPTVQEDGGDIQFISF--QG 152
SG P+L D S D D+ET Q+ IKELLDTRIRP V +DGGDI F F Q
Sbjct: 122 SGRPLLLDQTAESGGHDEGDYDEETSQIVAEIKELLDTRIRPAVAQDGGDIVFSRFEPQT 181
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
GVV L M+G+C+ CPSS TLK+GV+NML+ Y+PE T
Sbjct: 182 GVVWLHMRGACSGCPSSSATLKSGVENMLKHYVPEVT 218
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF--QDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELLDTRIRP V +DGGDI F F Q GV L G P+ A S + +L
Sbjct: 153 IKELLDTRIRPAVAQDGGDIVFSRFEPQTGVVWLHMRGACSGCPSSSATLKSGVENML 210
>gi|163852613|ref|YP_001640656.1| scaffold protein Nfu/NifU [Methylobacterium extorquens PA1]
gi|218531454|ref|YP_002422270.1| Scaffold protein Nfu/NifU [Methylobacterium extorquens CM4]
gi|240139947|ref|YP_002964424.1| NifU-like protein [Methylobacterium extorquens AM1]
gi|254562372|ref|YP_003069467.1| NifU-like [Methylobacterium extorquens DM4]
gi|418061490|ref|ZP_12699346.1| Scaffold protein Nfu/NifU [Methylobacterium extorquens DSM 13060]
gi|163664218|gb|ABY31585.1| Scaffold protein Nfu/NifU [Methylobacterium extorquens PA1]
gi|218523757|gb|ACK84342.1| Scaffold protein Nfu/NifU [Methylobacterium extorquens CM4]
gi|240009921|gb|ACS41147.1| NifU-like protein [Methylobacterium extorquens AM1]
gi|254269650|emb|CAX25622.1| NifU-like [Methylobacterium extorquens DM4]
gi|373564957|gb|EHP91030.1| Scaffold protein Nfu/NifU [Methylobacterium extorquens DSM 13060]
Length = 188
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 95/146 (65%), Gaps = 4/146 (2%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
+A SPL LF + GV V+FGHDFI+VTK D +W +KP + IMD F SG PVL
Sbjct: 35 SAERSPLATALFAVPGVSGVYFGHDFISVTKADGVNEWPQVKPAVLGAIMDHFQSGRPVL 94
Query: 105 TD----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQ 160
+ A+ ++ E D +TV IK+LL+TR+RP V DGGDI F ++ G+V L+M+
Sbjct: 95 AEGTALAEDETEEFYDEADHDTVVTIKDLLETRVRPAVAGDGGDITFRGYRDGIVYLEMK 154
Query: 161 GSCTSCPSSVVTLKNGVQNMLQFYIP 186
G+C+ CPSS TL+ GVQN+ + ++P
Sbjct: 155 GACSGCPSSTATLRQGVQNLFRHFLP 180
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
IK+LL+TR+RP V DGGDI F ++DG+ LE G P+ A
Sbjct: 120 IKDLLETRVRPAVAGDGGDITFRGYRDGIVYLEMKGACSGCPSSTA 165
>gi|389624183|ref|XP_003709745.1| HIRA-interacting protein 5 [Magnaporthe oryzae 70-15]
gi|351649274|gb|EHA57133.1| HIRA-interacting protein 5 [Magnaporthe oryzae 70-15]
Length = 319
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/168 (47%), Positives = 104/168 (61%), Gaps = 20/168 (11%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L I+GV+SVF+G DFITVTK D +W ++PEIF+ I
Sbjct: 110 PRSTIAPP-----YPSPLAAQLMNIDGVQSVFYGADFITVTKASD-ANWAHIRPEIFSLI 163
Query: 94 MDFFSSGLPVLT----------DAQPSSDTV----IHEDDDETVQMIKELLDTRIRPTVQ 139
+ +SG ++ D Q +S V +E+D E V MIKELL+TRIRP +Q
Sbjct: 164 TEAITSGQKIVNIVERTDASGEDGQETSGEVDSLSYNENDSEVVGMIKELLETRIRPAIQ 223
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
EDGGDI+F F+ G V LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 224 EDGGDIEFRGFEDGNVLLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 271
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TRIRP +QEDGGDI+F F+DG
Sbjct: 209 MIKELLETRIRPAIQEDGGDIEFRGFEDG 237
>gi|42520881|ref|NP_966796.1| NifU domain-containing protein [Wolbachia endosymbiont of
Drosophila melanogaster]
gi|42410621|gb|AAS14730.1| NifU domain protein [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 191
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/155 (45%), Positives = 102/155 (65%), Gaps = 3/155 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G+T DF S L LF+IE V VFFGHDFI+VTK D ++W +LK E+ TIM
Sbjct: 30 GETADFSNANEIKNSKLAANLFQIEHVVRVFFGHDFISVTKLDG-INWDILKVEVLTTIM 88
Query: 95 DFFSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
+ F+SG L + + + ++D E V IKEL+++ I+P V +DGGDI+F ++
Sbjct: 89 NHFTSGGKALDKEEVNDPDEEFFDKNDIEIVNRIKELMESHIKPAVAQDGGDIKFRGYKD 148
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V +++QG+C+ CPS+ +TLK GVQNML ++IPE
Sbjct: 149 GIVYVELQGACSGCPSAAITLKQGVQNMLSYHIPE 183
Score = 41.2 bits (95), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL+++ I+P V +DGGDI+F ++DG++
Sbjct: 122 IKELMESHIKPAVAQDGGDIKFRGYKDGIV 151
>gi|329847368|ref|ZP_08262396.1| scaffold protein Nfu/NifU [Asticcacaulis biprosthecum C19]
gi|328842431|gb|EGF92000.1| scaffold protein Nfu/NifU [Asticcacaulis biprosthecum C19]
Length = 188
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 106/163 (65%), Gaps = 9/163 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQ-DDDVDWKLLK 86
PGQ + F + A SPL + LF+I+GV ++FFG DF+TV + D + W LK
Sbjct: 18 PGQVVLAQGTKQFVSEDEAKVSPLAEALFKIDGVSALFFGSDFLTVRRDPDATLIWAQLK 77
Query: 87 PEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
P I A IMDF++SG P+L + + ++TV + + + IK+LLDTR+RP V +DGGDI+
Sbjct: 78 PPILAAIMDFYTSGQPILRETEVKTETVYEGELGQIIAEIKDLLDTRVRPAVAQDGGDIE 137
Query: 147 FISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F SF + G + L M+G+C CPSS TL+ GV+++++ Y+PE
Sbjct: 138 FDSFDMESGTLYLHMRGACAGCPSSSATLRQGVESLMKHYVPE 180
Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 22/25 (88%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
IK+LLDTR+RP V +DGGDI+F SF
Sbjct: 117 IKDLLDTRVRPAVAQDGGDIEFDSF 141
>gi|298293916|ref|YP_003695855.1| Scaffold protein Nfu/NifU [Starkeya novella DSM 506]
gi|296930427|gb|ADH91236.1| Scaffold protein Nfu/NifU [Starkeya novella DSM 506]
Length = 184
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 92/144 (63%), Gaps = 4/144 (2%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT 105
A SPL LF + GV VFFG DF+TVTK+ + W LKP I IM+ F SG PVL
Sbjct: 36 ASRSPLAARLFEVPGVTGVFFGSDFVTVTKEKGE--WAHLKPAILGAIMEHFVSGQPVLP 93
Query: 106 D--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSC 163
+ A + D E D V I+EL+DTR+RP V DGGDI F ++ GVV L M+GSC
Sbjct: 94 EDHAHVADDAFFEEKDAGVVDTIRELIDTRVRPAVANDGGDITFRGYKDGVVFLAMKGSC 153
Query: 164 TSCPSSVVTLKNGVQNMLQFYIPE 187
+ CPSS TLKNG++N+L+ ++P+
Sbjct: 154 SGCPSSTATLKNGIENLLRHFVPD 177
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+EL+DTR+RP V DGGDI F ++DGV+
Sbjct: 116 IRELIDTRVRPAVANDGGDITFRGYKDGVV 145
>gi|358372104|dbj|GAA88709.1| NifU-related protein [Aspergillus kawachii IFO 4308]
Length = 330
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 98/151 (64%), Gaps = 11/151 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL L ++GV SVF+G DFITVTK D +W +KPEIF+ I +SG ++
Sbjct: 133 HPSPLAASLLNVDGVTSVFYGPDFITVTKATDS-NWAHIKPEIFSLITQAVTSGEAIVNT 191
Query: 107 AQPSSDT----------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+ ++ E++DE + MIKELLDTRIRP +QEDGGDI+F F+ G+V
Sbjct: 192 VAKTGESGQEGGESESLAYEEEEDEVIGMIKELLDTRIRPAIQEDGGDIEFRGFENGIVL 251
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTL+NG+++ML YI E
Sbjct: 252 LKLRGACRTCDSSTVTLRNGIESMLMHYIEE 282
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELLDTRIRP +QEDGGDI+F F++G++
Sbjct: 220 MIKELLDTRIRPAIQEDGGDIEFRGFENGIV 250
>gi|367054808|ref|XP_003657782.1| hypothetical protein THITE_2123803 [Thielavia terrestris NRRL 8126]
gi|347005048|gb|AEO71446.1| hypothetical protein THITE_2123803 [Thielavia terrestris NRRL 8126]
Length = 330
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/171 (45%), Positives = 104/171 (60%), Gaps = 23/171 (13%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L I+GV SVF+G DFITVTK D +W ++PE+FA I
Sbjct: 118 PRSTISPP-----YPSPLAAQLLNIDGVTSVFYGADFITVTKAAD-ANWAHIRPEVFALI 171
Query: 94 MDFFSSGLPVLT----------------DAQPSSDTVIH-EDDDETVQMIKELLDTRIRP 136
+ +SG P++T D D++ + E+D E V MIKELL+TR+RP
Sbjct: 172 TEAITSGQPIVTVAERKEGAAAAAEGRADDVAERDSLSYDENDSEVVGMIKELLETRVRP 231
Query: 137 TVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+QEDGGD++F F+ G V LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 232 AIQEDGGDVEFRGFEDGYVMLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 282
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TR+RP +QEDGGD++F F+DG +
Sbjct: 220 MIKELLETRVRPAIQEDGGDVEFRGFEDGYV 250
>gi|145228927|ref|XP_001388772.1| nifU-related protein [Aspergillus niger CBS 513.88]
gi|134054866|emb|CAK36880.1| unnamed protein product [Aspergillus niger]
gi|350637974|gb|EHA26330.1| hypothetical protein ASPNIDRAFT_206214 [Aspergillus niger ATCC
1015]
Length = 330
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 98/151 (64%), Gaps = 11/151 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL L ++GV SVF+G DFITVTK D +W +KPEIF+ I +SG ++
Sbjct: 133 HPSPLAASLLNVDGVTSVFYGPDFITVTKATDS-NWAHIKPEIFSLITQAVTSGEAIVNT 191
Query: 107 AQPSSDT----------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+ ++ E++DE + MIKELLDTRIRP +QEDGGDI+F F+ G+V
Sbjct: 192 VAKTGESGQEGGESESLAYEEEEDEVIGMIKELLDTRIRPAIQEDGGDIEFRGFENGIVL 251
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTL+NG+++ML YI E
Sbjct: 252 LKLRGACRTCDSSTVTLRNGIESMLMHYIEE 282
Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 28/31 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELLDTRIRP +QEDGGDI+F F++G++
Sbjct: 220 MIKELLDTRIRPAIQEDGGDIEFRGFENGIV 250
>gi|157828872|ref|YP_001495114.1| hypothetical protein A1G_05615 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|378721695|ref|YP_005286582.1| hypothetical protein RPL_05660 [Rickettsia rickettsii str.
Colombia]
gi|379016058|ref|YP_005292293.1| hypothetical protein RPN_01365 [Rickettsia rickettsii str. Brazil]
gi|157801353|gb|ABV76606.1| hypothetical protein A1G_05615 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|376324582|gb|AFB21822.1| hypothetical protein RPN_01365 [Rickettsia rickettsii str. Brazil]
gi|376326719|gb|AFB23958.1| hypothetical protein RPL_05660 [Rickettsia rickettsii str.
Colombia]
Length = 190
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SGLPV +
Sbjct: 40 SKLAESLFYINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGLPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFYIPET 188
PSS +TL+NG+++ML+ ++PE
Sbjct: 158 PSSTITLRNGIESMLKHFVPEV 179
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|379712762|ref|YP_005301101.1| hypothetical protein RSA_05645 [Rickettsia philipii str. 364D]
gi|376329407|gb|AFB26644.1| hypothetical protein RSA_05645 [Rickettsia philipii str. 364D]
Length = 190
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SGLPV +
Sbjct: 40 SKLAESLFYINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGLPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFYIPET 188
PSS +TL+NG+++ML+ ++PE
Sbjct: 158 PSSTITLRNGIESMLKHFVPEV 179
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|357386410|ref|YP_004901134.1| NifU protein [Pelagibacterium halotolerans B2]
gi|351595047|gb|AEQ53384.1| NifU protein [Pelagibacterium halotolerans B2]
Length = 188
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 101/158 (63%), Gaps = 6/158 (3%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
PG+ DF A SPL LF ++GV VF G DF++VTK D+ +DW +KP I +
Sbjct: 24 PGEPRDFRDADMARMSPLASALFSVDGVSGVFLGSDFVSVTK-DEPIDWAHIKPAILGAV 82
Query: 94 MDFFSSGLPVLTD---AQPSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFI 148
M+ F SG P+L + A+P+ DD ETV++IKELL TR+RP V DGGDI F
Sbjct: 83 MEHFMSGKPILAEGAAAEPADTGDEFFDDDDAETVEVIKELLATRVRPAVAMDGGDITFK 142
Query: 149 SFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
++ G V L MQG+C+ CPSS TLK+G++N+L+ ++P
Sbjct: 143 GYKEGTVFLHMQGACSGCPSSTATLKSGIENLLRHFVP 180
Score = 42.0 bits (97), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLLFR- 57
+IKELL TR+RP V DGGDI F +++G L G P+ A S + LL
Sbjct: 119 VIKELLATRVRPAVAMDGGDITFKGYKEGTVFLHMQGACSGCPSSTATLKSGIENLLRHF 178
Query: 58 IEGVKSV 64
+ GV+ V
Sbjct: 179 VPGVEQV 185
>gi|165933598|ref|YP_001650387.1| mitochondrial-type Fe-S cluster assembly protein NFU [Rickettsia
rickettsii str. Iowa]
gi|378723042|ref|YP_005287928.1| hypothetical protein RPO_05680 [Rickettsia rickettsii str. Arizona]
gi|378724396|ref|YP_005289280.1| hypothetical protein RPM_05650 [Rickettsia rickettsii str. Hauke]
gi|379018181|ref|YP_005294416.1| hypothetical protein RPJ_05625 [Rickettsia rickettsii str. Hino]
gi|165908685|gb|ABY72981.1| mitochondrial-type Fe-S cluster assembly protein NFU [Rickettsia
rickettsii str. Iowa]
gi|376328066|gb|AFB25304.1| hypothetical protein RPO_05680 [Rickettsia rickettsii str. Arizona]
gi|376330747|gb|AFB27983.1| hypothetical protein RPJ_05625 [Rickettsia rickettsii str. Hino]
gi|376333411|gb|AFB30644.1| hypothetical protein RPM_05650 [Rickettsia rickettsii str. Hauke]
Length = 190
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SGLPV +
Sbjct: 40 SKLAESLFYINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGLPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFYIPET 188
PSS +TL+NG+++ML+ ++PE
Sbjct: 158 PSSTITLRNGIESMLKHFVPEV 179
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|398822668|ref|ZP_10581046.1| thioredoxin-like protein [Bradyrhizobium sp. YR681]
gi|398226699|gb|EJN12943.1| thioredoxin-like protein [Bradyrhizobium sp. YR681]
Length = 189
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 103/160 (64%), Gaps = 9/160 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G ++F ++A SPL + LF + GV VF+G DFITVTK D + W+ LKP I IM
Sbjct: 25 GGPMEFANRESAARSPLAEKLFDVPGVTGVFYGSDFITVTKADGE--WQQLKPAILGAIM 82
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDD-------ETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ + SG P+L D D + ++D+ ETV MIK+L++TR+RP V DGGDI F
Sbjct: 83 EHYMSGAPLLADGAAPGDADLDDEDEFFDESDAETVDMIKDLIETRVRPAVANDGGDITF 142
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V L M+GSC CPSS TL++G+QN+L+ ++P+
Sbjct: 143 RGFKDGIVYLNMKGSCAGCPSSTATLQHGIQNLLKHFVPD 182
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L++TR+RP V DGGDI F F+DG++
Sbjct: 120 MIKDLIETRVRPAVANDGGDITFRGFKDGIV 150
>gi|392575222|gb|EIW68356.1| hypothetical protein TREMEDRAFT_32414 [Tremella mesenterica DSM
1558]
Length = 217
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 111/169 (65%), Gaps = 6/169 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV G T +F +AA SPL L I+G+ VFFG DF+T +K DD W
Sbjct: 14 LKFIPGVPVTSGSTHEFLDLRAALPSPLATRLLEIDGLLGVFFGPDFVTCSK-DDTYSWS 72
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQP---SSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
+LKPEIFA +M+ F+SG P+ + Q + DT + E D + V MIKELL+TR+RP +QE
Sbjct: 73 VLKPEIFAILMEHFTSGAPLFQEGQEGARAEDTRVLESDSDVVGMIKELLETRVRPAIQE 132
Query: 141 DGGDIQFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI++ F+ G+VKLK++GSC C SS VTLKNG++ ML Y+PE
Sbjct: 133 DGGDIEYKGFEEKSGIVKLKLKGSCRGCSSSSVTLKNGIERMLMHYVPE 181
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 25/28 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TR+RP +QEDGGDI++ F++
Sbjct: 117 MIKELLETRVRPAIQEDGGDIEYKGFEE 144
>gi|379019495|ref|YP_005295729.1| hypothetical protein RPK_05605 [Rickettsia rickettsii str. Hlp#2]
gi|376332075|gb|AFB29309.1| hypothetical protein RPK_05605 [Rickettsia rickettsii str. Hlp#2]
Length = 190
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SGLPV +
Sbjct: 40 SKLAESLFYINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGLPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFYIPET 188
PSS +TL+NG+++ML+ ++PE
Sbjct: 158 PSSTITLRNGIESMLKHFVPEV 179
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|451941060|ref|YP_007461698.1| NifU-related protein [Bartonella australis Aust/NH1]
gi|451900447|gb|AGF74910.1| NifU-related protein [Bartonella australis Aust/NH1]
Length = 192
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 96/151 (63%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I V VFFGHDFITVTK + + W+ LKP I TIM+ F SG PV
Sbjct: 35 EAAESSPLAVKLFNIPNVSGVFFGHDFITVTKNNGE--WQHLKPAILGTIMEHFLSGDPV 92
Query: 104 LTDA-------QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+T ++ +E D + V IKELL+TR+RP V DGGDI F F+ G+V
Sbjct: 93 ITTNATTQAQTHALNEEFYNEKDADIVATIKELLETRVRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C+ CPSS TLK G++N+L+ +IP+
Sbjct: 153 LNMRGACSGCPSSTATLKYGIENLLRHFIPD 183
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V DGGDI F F++G++
Sbjct: 122 IKELLETRVRPAVANDGGDITFRGFENGIV 151
>gi|163842411|ref|YP_001626815.1| HIRA-interacting protein 5 [Brucella suis ATCC 23445]
gi|163673134|gb|ABY37245.1| HIRA-interacting protein 5 [Brucella suis ATCC 23445]
Length = 190
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 103/172 (59%), Gaps = 10/172 (5%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAA-YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW 82
+ F G + P T DF +A SPL LF + GV VFFG+DFITVTK+ + W
Sbjct: 14 LKFLPGKVVMPEGTADFRDPPSAENTSPLAAKLFAVPGVTGVFFGYDFITVTKEHGE--W 71
Query: 83 KLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIH-------EDDDETVQMIKELLDTRIR 135
+ LKP I TIM+ F SG P + + H E D E V+ IKEL++TR+R
Sbjct: 72 QHLKPAILGTIMEHFMSGAPAMAGNANADAAAAHGEEEFFDEADTEIVETIKELIETRVR 131
Query: 136 PTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
P V +DGGDI F F+ G V L M+G+C+ CPSS TLK+G+QN+L+ ++PE
Sbjct: 132 PAVAQDGGDITFRGFENGTVFLHMKGACSGCPSSTATLKHGIQNLLRHFVPE 183
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++TR+RP V +DGGDI F F++G +
Sbjct: 122 IKELIETRVRPAVAQDGGDITFRGFENGTV 151
>gi|27375911|ref|NP_767440.1| hypothetical protein bll0800 [Bradyrhizobium japonicum USDA 110]
gi|27349049|dbj|BAC46065.1| bll0800 [Bradyrhizobium japonicum USDA 110]
Length = 189
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 103/160 (64%), Gaps = 9/160 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G ++F + ++A SPL + LF + GV VF+G DFITVTK + + W+ LKP I IM
Sbjct: 25 GSPMEFASRESAARSPLAEKLFEVPGVTGVFYGSDFITVTKANGE--WQQLKPAILGAIM 82
Query: 95 DFFSSGLPVLTDAQPSSDT-------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ + SG P+L D SD E D ETV MIK+L++TR+RP V DGGDI F
Sbjct: 83 EHYMSGAPLLADGAAQSDADLDDEDEFFDEADAETVDMIKDLIETRVRPAVANDGGDITF 142
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V L M+G+C+ CPSS TL++G+QN+L+ ++P+
Sbjct: 143 RGFKDGIVYLNMKGACSGCPSSTATLQHGIQNLLKHFVPD 182
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L++TR+RP V DGGDI F F+DG++
Sbjct: 120 MIKDLIETRVRPAVANDGGDITFRGFKDGIV 150
>gi|296114423|ref|ZP_06833077.1| Scaffold protein Nfu/NifU [Gluconacetobacter hansenii ATCC 23769]
gi|295979184|gb|EFG85908.1| Scaffold protein Nfu/NifU [Gluconacetobacter hansenii ATCC 23769]
Length = 187
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/155 (49%), Positives = 102/155 (65%), Gaps = 4/155 (2%)
Query: 35 GQTIDFPTGQA-AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
G T DF + A S L ++LF +EGV VFFG DF+ VTK D V W LKP++ + +
Sbjct: 26 GATADFIDADSVAGRSRLAEVLFDLEGVSRVFFGGDFVAVTKADT-VAWDELKPQVLSVV 84
Query: 94 MDFFSSG-LPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
D+ ++G PV +A D I D+E V+ IKELLDTR+RP V DGGDI F ++
Sbjct: 85 ADYLATGQAPVEHEAVVIEDA-IAPGDEEIVKQIKELLDTRVRPAVAGDGGDIVFRGYRD 143
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V+L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 144 GIVRLTMQGACSGCPSSRATLKHGVENMLRHYVPE 178
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELLDTR+RP V DGGDI F ++DG++
Sbjct: 117 IKELLDTRVRPAVAGDGGDIVFRGYRDGIVR 147
>gi|15964154|ref|NP_384507.1| hypothetical protein SMc01119 [Sinorhizobium meliloti 1021]
gi|334314804|ref|YP_004547423.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti AK83]
gi|384528141|ref|YP_005712229.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti BL225C]
gi|384534499|ref|YP_005718584.1| hypothetical protein SM11_chr0035 [Sinorhizobium meliloti SM11]
gi|407719243|ref|YP_006838905.1| hypothetical protein BN406_00034 [Sinorhizobium meliloti Rm41]
gi|418400274|ref|ZP_12973816.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti CCNWSX0020]
gi|433612187|ref|YP_007188985.1| Thioredoxin-like protein and domains [Sinorhizobium meliloti GR4]
gi|15073330|emb|CAC41838.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|333810317|gb|AEG02986.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti BL225C]
gi|334093798|gb|AEG51809.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti AK83]
gi|336031391|gb|AEH77323.1| hypothetical protein SM11_chr0035 [Sinorhizobium meliloti SM11]
gi|359505743|gb|EHK78263.1| Scaffold protein Nfu/NifU [Sinorhizobium meliloti CCNWSX0020]
gi|407317475|emb|CCM66079.1| hypothetical protein BN406_00034 [Sinorhizobium meliloti Rm41]
gi|429550377|gb|AGA05386.1| Thioredoxin-like protein and domains [Sinorhizobium meliloti GR4]
Length = 188
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 97/149 (65%), Gaps = 7/149 (4%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A SPL LF I GV V+FG+DFITV+K+ + W+ LKP I +IM+ F SG P+
Sbjct: 35 EALAGSPLAARLFSIPGVTGVYFGYDFITVSKEAQE--WQHLKPAILGSIMEHFMSGQPI 92
Query: 104 LTDAQPSS-----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
++ A + D E D+ V IKELL+TR+RP V +DGGDI F F+ G V L
Sbjct: 93 MSGAGRAEQTDEEDEFFDEGDEAIVATIKELLETRVRPAVAQDGGDITFRGFKDGTVFLN 152
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
M+G+C+ CPSS TL++GVQN+L+ ++PE
Sbjct: 153 MKGACSGCPSSTATLRHGVQNLLRHFVPE 181
Score = 45.8 bits (107), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLLFR-- 57
IKELL+TR+RP V +DGGDI F F+DG L G P+ A + LL
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGTVFLNMKGACSGCPSSTATLRHGVQNLLRHFV 179
Query: 58 --IEGVKSV 64
+E V+SV
Sbjct: 180 PEVEAVESV 188
>gi|340517830|gb|EGR48073.1| predicted protein [Trichoderma reesei QM6a]
Length = 294
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 101/165 (61%), Gaps = 17/165 (10%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P + SPL L I+GV SVF+G DFITVTK D +W ++PEIFA I
Sbjct: 100 PRSTISPP-----HPSPLAAKLMNIDGVTSVFYGTDFITVTKAGD-ANWAHIRPEIFALI 153
Query: 94 MDFFSSGLPVLTDAQPSSDTV-----------IHEDDDETVQMIKELLDTRIRPTVQEDG 142
+ +SG ++ + +D +E+D E V MIKELL+TRIRP +QEDG
Sbjct: 154 TEAITSGEKIVNVVERKADEAGQAAAEEDSLAYNENDSEVVGMIKELLETRIRPAIQEDG 213
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GDI+F F+ G V LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 214 GDIEFRGFEDGQVLLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 258
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TRIRP +QEDGGDI+F F+DG
Sbjct: 196 MIKELLETRIRPAIQEDGGDIEFRGFEDG 224
>gi|378824632|ref|YP_005187364.1| NFU1 iron-sulfur cluster scaffold protein [Sinorhizobium fredii
HH103]
gi|365177684|emb|CCE94539.1| NFU1 iron-sulfur cluster scaffold homolog,mitochondrial
[Sinorhizobium fredii HH103]
Length = 188
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 97/149 (65%), Gaps = 7/149 (4%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A SPL LF I GV V+FG+DFITV+K+ + W LKP + +IM+ F SG P+
Sbjct: 35 EARAGSPLAARLFSIPGVTGVYFGYDFITVSKEGQE--WPHLKPAVLGSIMEHFMSGQPI 92
Query: 104 LTDAQPSSDTVIH-----EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
++ A + +T + E D+ V IKELL+TR+RP V +DGGDI F F+ G V L
Sbjct: 93 MSGAGRAEETDLEGEFYDEGDEAIVATIKELLETRVRPAVAQDGGDITFRGFKDGTVFLN 152
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
M+G+C CPSS TL++GVQN+L+ ++PE
Sbjct: 153 MKGACAGCPSSTATLRHGVQNLLRHFVPE 181
Score = 46.2 bits (108), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLLFR-- 57
IKELL+TR+RP V +DGGDI F F+DG L G P+ A + LL
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGTVFLNMKGACAGCPSSTATLRHGVQNLLRHFV 179
Query: 58 --IEGVKSV 64
+E V+SV
Sbjct: 180 PEVESVESV 188
>gi|170084143|ref|XP_001873295.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650847|gb|EDR15087.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 212
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/159 (48%), Positives = 105/159 (66%), Gaps = 9/159 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F ++A SPL L +EGV VF+G DF+TV+K D + W ++KPEI++ IM+F
Sbjct: 27 TAEFLDTRSALISPLAIRLMGVEGVSGVFYGPDFVTVSK-DSEHRWAVVKPEIYSIIMEF 85
Query: 97 FSSGLPVL-TDAQPSS----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
FSSG + TD + DT I + D ETV MIKELL+TR+RP + EDGGDI+F F
Sbjct: 86 FSSGQKLFRTDEEREQAGPQDTRILDTDSETVAMIKELLETRVRPAIMEDGGDIEFRGFD 145
Query: 152 ---GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+VK+K++GSC C SS VTLK+G++ ML Y+PE
Sbjct: 146 EEGDRLVKVKLKGSCRGCDSSTVTLKSGIERMLMHYVPE 184
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TR+RP + EDGGDI+F F +
Sbjct: 119 MIKELLETRVRPAIMEDGGDIEFRGFDE 146
>gi|426223400|ref|XP_004005863.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
[Ovis aries]
Length = 113
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/94 (71%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
Query: 94 MDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
MDFF+SGLP++T+ PS + EDDDE V MIKELLDTRIRPTVQEDGGD+ + F+ G
Sbjct: 1 MDFFASGLPLVTEETPSGEAG-SEDDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDG 59
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+V+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 60 IVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 93
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 31 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 62
>gi|209965893|ref|YP_002298808.1| NifU-like domain-containing protein [Rhodospirillum centenum SW]
gi|209959359|gb|ACI99995.1| NifU-like domain protein [Rhodospirillum centenum SW]
Length = 186
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 96/153 (62%), Gaps = 3/153 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + A SPL LF +EGV VF G DF+TVTK +D DW LKP + +M+
Sbjct: 27 TADFAGPETAGPSPLAARLFEVEGVTRVFLGADFVTVTKTEDK-DWYALKPSVLGVLMEH 85
Query: 97 FSSGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
F++G PVL + A + +D+E V IKELLD R+RP V +DGGDI F F GV
Sbjct: 86 FTAGRPVLLEGTADDGHAEAANAEDEEVVAQIKELLDIRVRPAVAQDGGDITFHGFDKGV 145
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V L M+G+C CPSS TLK G++N+L+ YIPE
Sbjct: 146 VYLHMKGACAGCPSSTATLKAGIENLLRHYIPE 178
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELLD R+RP V +DGGDI F F GV L G P+ A + + LL
Sbjct: 117 IKELLDIRVRPAVAQDGGDITFHGFDKGVVYLHMKGACAGCPSSTATLKAGIENLL 172
>gi|302695957|ref|XP_003037657.1| hypothetical protein SCHCODRAFT_48637 [Schizophyllum commune H4-8]
gi|300111354|gb|EFJ02755.1| hypothetical protein SCHCODRAFT_48637 [Schizophyllum commune H4-8]
Length = 220
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/167 (46%), Positives = 110/167 (65%), Gaps = 12/167 (7%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
V+ E G T +F ++A SPL L IEGV++VF+G DF+TV+K + W ++KPEI
Sbjct: 22 VMGESG-TAEFLDTRSALTSPLAVRLMGIEGVRAVFYGPDFVTVSKSSEH-PWSVIKPEI 79
Query: 90 FATIMDFFSSGLPVL-------TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDG 142
++ +M+FF+S L +A P DT I + D + V MIKELL+TR+RP + EDG
Sbjct: 80 YSVLMEFFTSNNQPLFRSKEDRENAGPQ-DTRILDTDSDVVAMIKELLETRVRPAIMEDG 138
Query: 143 GDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GDI++ F + GVV++K++GSC C SS VTLK G++NML YIPE
Sbjct: 139 GDIEYRGFDEESGVVQVKLKGSCRGCSSSTVTLKTGIENMLMHYIPE 185
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%), Gaps = 2/34 (5%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGVLE 32
MIKELL+TR+RP + EDGGDI++ F + GV++
Sbjct: 121 MIKELLETRVRPAIMEDGGDIEYRGFDEESGVVQ 154
>gi|315052166|ref|XP_003175457.1| hypothetical protein MGYG_02982 [Arthroderma gypseum CBS 118893]
gi|311340772|gb|EFQ99974.1| hypothetical protein MGYG_02982 [Arthroderma gypseum CBS 118893]
Length = 301
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 101/157 (64%), Gaps = 12/157 (7%)
Query: 42 TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSG- 100
T Q Y SPL L ++G SVFFG DFITVTK D D +W +KPEIF+ I + + G
Sbjct: 111 TLQPPYPSPLAAKLLNVDGAVSVFFGSDFITVTK-DSDANWAHIKPEIFSLITEAITRGE 169
Query: 101 -LPVLTDAQPSSDTV---------IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
L + D +P + +E+D+E V MI+ELL+TRIRP +QEDGGDI+F F
Sbjct: 170 ALVNVVDVRPGKEGAEEVGEEAVRYNEEDEEIVGMIQELLETRIRPAIQEDGGDIEFRGF 229
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 230 ENGNVLLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 266
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI+ELL+TRIRP +QEDGGDI+F F++G
Sbjct: 204 MIQELLETRIRPAIQEDGGDIEFRGFENG 232
>gi|316931562|ref|YP_004106544.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris DX-1]
gi|315599276|gb|ADU41811.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris DX-1]
Length = 188
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 100/156 (64%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F A SPL LF I+GV VF+G DF+TVTK D +W+ LKP I IM+
Sbjct: 27 TLEFTDAAQAARSPLAARLFDIDGVSGVFYGADFVTVTK--DRGEWQHLKPAILGAIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTV-----IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
+ SG P+L D + D E D ETV++IK+L++TR+RP V DGGDI F F+
Sbjct: 85 YMSGAPILADGKSDGDDGDDDEFYAEGDAETVEIIKDLIETRVRPAVANDGGDITFRGFK 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V L M+G+C CPSS TL++G+QN+L+ ++PE
Sbjct: 145 DGIVYLNMRGACAGCPSSTATLQHGIQNLLKHFVPE 180
Score = 43.9 bits (102), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+L++TR+RP V DGGDI F F+DG++
Sbjct: 118 IIKDLIETRVRPAVANDGGDITFRGFKDGIV 148
>gi|395779328|ref|ZP_10459815.1| hypothetical protein MCU_01516 [Bartonella elizabethae Re6043vi]
gi|423716231|ref|ZP_17690446.1| hypothetical protein MEE_01636 [Bartonella elizabethae F9251]
gi|395415947|gb|EJF82364.1| hypothetical protein MCU_01516 [Bartonella elizabethae Re6043vi]
gi|395426062|gb|EJF92202.1| hypothetical protein MEE_01636 [Bartonella elizabethae F9251]
Length = 192
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 96/151 (63%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I V VF G+DFITV+K++ + W+ LKP I TIM+ F S PV
Sbjct: 35 EAAKSSPLAAKLFNIPNVNGVFLGYDFITVSKKEGE--WQHLKPVILGTIMEHFLSNEPV 92
Query: 104 LT-------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+T A ++ E D + V IKELL+TRIRP V DGGDI F F+ G+V
Sbjct: 93 ITTNATTQAKAHALNEEFYDEKDADIVLTIKELLETRIRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C+ CPSS TLK+G++N+L+ +IPE
Sbjct: 153 LNMRGACSGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TRIRP V DGGDI F F++G++
Sbjct: 122 IKELLETRIRPAVANDGGDITFRGFENGIV 151
>gi|374571694|ref|ZP_09644790.1| thioredoxin-like protein [Bradyrhizobium sp. WSM471]
gi|374420015|gb|EHQ99547.1| thioredoxin-like protein [Bradyrhizobium sp. WSM471]
Length = 189
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/160 (45%), Positives = 102/160 (63%), Gaps = 9/160 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G ++F ++A SPL + LF + GV VF+G DFITVTK + + W+ LKP I IM
Sbjct: 25 GGPMEFSNRESAARSPLAEKLFEVPGVTGVFYGSDFITVTKANGE--WQQLKPAILGAIM 82
Query: 95 DFFSSGLPVLTDAQPSSDT-------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ + SG P+L D +SD E D ETV MIK+L++TR+RP V DGGDI F
Sbjct: 83 EHYMSGAPLLADGATASDVDLDDEDEFFDEADAETVDMIKDLIETRVRPAVANDGGDITF 142
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V L M+GSC CPSS TL++G+QN+L+ ++P+
Sbjct: 143 RGFKDGIVYLNMKGSCAGCPSSTATLQHGIQNLLKHFVPD 182
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L++TR+RP V DGGDI F F+DG++
Sbjct: 120 MIKDLIETRVRPAVANDGGDITFRGFKDGIV 150
>gi|389690727|ref|ZP_10179620.1| thioredoxin-like protein [Microvirga sp. WSM3557]
gi|388588970|gb|EIM29259.1| thioredoxin-like protein [Microvirga sp. WSM3557]
Length = 186
Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 103/168 (61%), Gaps = 6/168 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + P T + T + SPL + LF + GV VFFG+DF+TVTK D + W+
Sbjct: 14 LKFLPGRVVMPEGTFEAKTPEQGEVSPLAQRLFAVPGVTGVFFGYDFVTVTKADGE--WQ 71
Query: 84 LLKPEIFATIMDFFSSGLPVLTD----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
LKP I IM+ F +G P+ + +Q + + D TV+ IKELL+TRIRP V
Sbjct: 72 HLKPAILGAIMEHFMTGAPLFANGYGASQEDGEEFFDDADAATVETIKELLETRIRPAVA 131
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI F F+ G V L M+G+C+ CPSS TL++G+QN+L+ ++P+
Sbjct: 132 GDGGDITFRGFKDGTVYLVMKGACSGCPSSTATLRHGIQNLLRHFLPD 179
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TRIRP V DGGDI F F+DG +
Sbjct: 118 IKELLETRIRPAVAGDGGDITFRGFKDGTV 147
>gi|326475115|gb|EGD99124.1| NifU domain-containing protein [Trichophyton tonsurans CBS 112818]
gi|326482250|gb|EGE06260.1| scaffold protein Nfu/NifU [Trichophyton equinum CBS 127.97]
Length = 304
Score = 143 bits (360), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 75/158 (47%), Positives = 101/158 (63%), Gaps = 13/158 (8%)
Query: 42 TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSG- 100
T Q Y SPL L ++G SVFFG DFITVTK D D +W +KPE+F+ I + + G
Sbjct: 111 TLQPPYPSPLAAKLLNVDGAVSVFFGSDFITVTK-DSDANWAHIKPEVFSLITEAITRGE 169
Query: 101 -LPVLTDAQPSSDTV----------IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
L + D +P + +E+D+E V MI+ELL+TRIRP +QEDGGDI+F
Sbjct: 170 ALVNVVDVRPGKEGAEGAEAEEAVRYNEEDEEVVGMIQELLETRIRPAIQEDGGDIEFRG 229
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 230 FENGNVLLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 267
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI+ELL+TRIRP +QEDGGDI+F F++G
Sbjct: 205 MIQELLETRIRPAIQEDGGDIEFRGFENG 233
>gi|304320546|ref|YP_003854189.1| NifU-like domain-containing protein [Parvularcula bermudensis
HTCC2503]
gi|303299448|gb|ADM09047.1| NifU-like domain protein [Parvularcula bermudensis HTCC2503]
Length = 163
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 107/159 (67%), Gaps = 9/159 (5%)
Query: 38 IDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFF 97
+DFPT ++A SPL LF I+GV V+ G DF+TVTK D V+W+ LKP + T+ D+
Sbjct: 1 MDFPTLESAKVSPLASALFDIDGVVEVYLGADFLTVTK-DPSVEWQHLKPAVLGTVADYL 59
Query: 98 SSGLPVLTDAQPSSDTVIHEDD-----DETVQMIKELLDTRIRPTVQEDGGDIQFISF-- 150
++G+PV+ D ++D+ DD E V+ I +L++TR+RP V +DGGDI F F
Sbjct: 60 AAGIPVV-DQGAAADSADTPDDYEGETKEIVEQIIDLIETRVRPAVAQDGGDIVFHRFVP 118
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
G+V L M+G+C+ CPSS +TLK+G++N+L+ Y+PE T
Sbjct: 119 GDGIVFLSMRGACSGCPSSTMTLKSGIENLLKHYVPEVT 157
>gi|400600627|gb|EJP68301.1| HIRA-interacting protein [Beauveria bassiana ARSEF 2860]
Length = 328
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/167 (47%), Positives = 105/167 (62%), Gaps = 19/167 (11%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P + SPL L I+GV SVF+G DFIT+TK D +W ++PEIFA I
Sbjct: 132 PRATIAPP-----HPSPLAAKLMNIDGVTSVFYGADFITITKASD-ANWAHIRPEIFALI 185
Query: 94 MDFFSSGLPVLT-----------DAQPSSDTVIH-EDDDETVQMIKELLDTRIRPTVQED 141
+ +SG ++T A+ +D++ + EDDDE V MIKELL+TRIRP +QED
Sbjct: 186 TEAITSGETIVTYKEAPVGAGAAPAEEQADSLAYDEDDDEVVGMIKELLETRIRPAIQED 245
Query: 142 GGDIQFISF-QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GGDI+F F G V LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 246 GGDIEFRGFGDDGFVNLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 292
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP +QEDGGDI+F F D
Sbjct: 229 MIKELLETRIRPAIQEDGGDIEFRGFGD 256
>gi|170741563|ref|YP_001770218.1| scaffold protein Nfu/NifU [Methylobacterium sp. 4-46]
gi|168195837|gb|ACA17784.1| Scaffold protein Nfu/NifU [Methylobacterium sp. 4-46]
Length = 187
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 94/145 (64%), Gaps = 3/145 (2%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL- 104
A SPL + LF + GV V+FGHDFI+VTK +D +W +KP + IM+ F SG PVL
Sbjct: 36 AAPSPLARALFAVPGVAGVYFGHDFISVTKAEDGSEWPQVKPAVLGAIMEHFLSGAPVLD 95
Query: 105 --TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGS 162
++ E D +TV IK+LL+TR+RP V DGGDI F ++ GVV L+M+G+
Sbjct: 96 AGAAPAAPAEEFFAEADADTVATIKDLLETRVRPAVAGDGGDITFRGYREGVVYLEMKGA 155
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPE 187
C+ CPSS TL+ GVQN+ + ++PE
Sbjct: 156 CSGCPSSTATLRQGVQNLFRHFLPE 180
Score = 42.4 bits (98), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
IK+LL+TR+RP V DGGDI F +++GV LE G P+ A
Sbjct: 119 IKDLLETRVRPAVAGDGGDITFRGYREGVVYLEMKGACSGCPSSTA 164
>gi|341038530|gb|EGS23522.1| nifu-like protein [Chaetomium thermophilum var. thermophilum DSM
1495]
Length = 326
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 103/169 (60%), Gaps = 29/169 (17%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
Y SPL L ++GVKSVF+G DFITVTK + D +W ++PE+F+ I + S+G P++
Sbjct: 116 YPSPLASQLMAVDGVKSVFYGPDFITVTK-ETDANWAHIRPEVFSLITEAISAGQPIVNI 174
Query: 106 --------------------------DAQPSSDTVIHE-DDDETVQMIKELLDTRIRPTV 138
+ Q D++ ++ +DDE V MIKELL+TR+RP +
Sbjct: 175 TQADAAQGGEAAQTGEASATQSQGEREQQAEKDSLAYDPNDDEVVGMIKELLETRVRPAI 234
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
QEDGGDI+F F+ G V LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 235 QEDGGDIEFRGFKDGYVHLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 283
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 27/32 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TR+RP +QEDGGDI+F F+DG +
Sbjct: 221 MIKELLETRVRPAIQEDGGDIEFRGFKDGYVH 252
>gi|327289878|ref|XP_003229651.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like, partial [Anolis carolinensis]
Length = 129
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 67/105 (63%), Positives = 84/105 (80%), Gaps = 2/105 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
VLE +T++F + + YCSPL + LFRIEGVKSVFFG DF+TVTK+ +DVDW L+KP+I
Sbjct: 27 VLE--SRTMEFTSPASTYCSPLARQLFRIEGVKSVFFGADFVTVTKESEDVDWNLIKPDI 84
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRI 134
+ATIMDF++SGLPV+TD P +T E+DDE V MIKELLDTRI
Sbjct: 85 YATIMDFYASGLPVVTDEAPRPETAPSEEDDEVVSMIKELLDTRI 129
>gi|163868796|ref|YP_001610020.1| NifU-like protein [Bartonella tribocorum CIP 105476]
gi|161018467|emb|CAK02025.1| NifU-related protein [Bartonella tribocorum CIP 105476]
Length = 192
Score = 142 bits (359), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 95/151 (62%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I V VF G+DFITV+K++ + W+ LKP I TIM+ F S PV
Sbjct: 35 EAAKNSPLAAKLFNIPNVNGVFLGYDFITVSKKEGE--WQHLKPVILGTIMEHFLSNEPV 92
Query: 104 LT-------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+T A ++ E D + V IKELL+TRIRP V DGGDI F F+ G+V
Sbjct: 93 ITTNATTQAHAHALNEEFYDEKDADIVLTIKELLETRIRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 153 LNMRGACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TRIRP V DGGDI F F++G++
Sbjct: 122 IKELLETRIRPAVANDGGDITFRGFENGIV 151
>gi|383768305|ref|YP_005447368.1| hypothetical protein S23_00280 [Bradyrhizobium sp. S23321]
gi|381356426|dbj|BAL73256.1| hypothetical protein S23_00280 [Bradyrhizobium sp. S23321]
Length = 189
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 72/160 (45%), Positives = 102/160 (63%), Gaps = 9/160 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G ++F + ++A SPL + LF + GV VF+G DFITVTK + + W+ LKP I IM
Sbjct: 25 GGPMEFASRESATRSPLAEKLFEVPGVTGVFYGSDFITVTKANGE--WQQLKPAILGAIM 82
Query: 95 DFFSSGLPVLTDAQPSSDT-------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ + SG P+L D + D E D ETV MIK+L++TR+RP V DGGDI F
Sbjct: 83 EHYMSGAPLLADGTAAGDADLDDEDEFFDEADAETVDMIKDLIETRVRPAVANDGGDITF 142
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V L M+GSC CPSS TL++G+QN+L+ ++P+
Sbjct: 143 RGFKDGIVYLNMKGSCAGCPSSTATLQHGIQNLLKHFVPD 182
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L++TR+RP V DGGDI F F+DG++
Sbjct: 120 MIKDLIETRVRPAVANDGGDITFRGFKDGIV 150
>gi|50593023|ref|NP_001002756.1| NFU1 iron-sulfur cluster scaffold homolog, mitochondrial isoform 3
[Homo sapiens]
gi|114577881|ref|XP_001137265.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 3 [Pan troglodytes]
gi|114577883|ref|XP_001137343.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 4 [Pan troglodytes]
gi|114577885|ref|XP_001137421.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 5 [Pan troglodytes]
gi|332226736|ref|XP_003262548.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 4 [Nomascus leucogenys]
gi|332226738|ref|XP_003262549.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 5 [Nomascus leucogenys]
gi|332226740|ref|XP_003262550.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 6 [Nomascus leucogenys]
gi|402891133|ref|XP_003908812.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 4 [Papio anubis]
gi|402891135|ref|XP_003908813.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 5 [Papio anubis]
gi|402891137|ref|XP_003908814.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 6 [Papio anubis]
Length = 113
Score = 142 bits (358), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
Query: 94 MDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
MDFF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G
Sbjct: 1 MDFFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDG 59
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+V+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 60 IVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 93
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 31 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 62
>gi|58699011|ref|ZP_00373859.1| NifU domain protein [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225630807|ref|YP_002727598.1| NifU domain protein [Wolbachia sp. wRi]
gi|58534475|gb|EAL58626.1| NifU domain protein [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225592788|gb|ACN95807.1| NifU domain protein [Wolbachia sp. wRi]
Length = 194
Score = 142 bits (358), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 99/158 (62%), Gaps = 6/158 (3%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G+T DF S L LF+IE V VFFGHDFI+VTK ++W LK EI TIM
Sbjct: 30 GETTDFSNANEIKNSKLAANLFQIEHVVRVFFGHDFISVTKLGG-INWDTLKVEILTTIM 88
Query: 95 DFFSSGLPVL-----TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
D F+SG L D + ++D E V IKEL+++ I+P V +DGGDI+F
Sbjct: 89 DHFTSGGKALDKEGVNDNNIPDEEFFDKNDIEIVNRIKELMESYIKPAVAQDGGDIKFRG 148
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++ G+V +++QG+C+ CPS+ +TLK GVQNML ++IPE
Sbjct: 149 YKDGIVYVELQGACSGCPSAAITLKQGVQNMLSYHIPE 186
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL+++ I+P V +DGGDI+F ++DG++
Sbjct: 125 IKELMESYIKPAVAQDGGDIKFRGYKDGIV 154
>gi|358396964|gb|EHK46339.1| hypothetical protein TRIATDRAFT_299034 [Trichoderma atroviride IMI
206040]
Length = 307
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 103/165 (62%), Gaps = 17/165 (10%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P + SPL L I+G+ SVF+G DFITVTK D +W ++PEIFA I
Sbjct: 112 PRSTISPP-----HPSPLAAKLMNIDGITSVFYGADFITVTKAGD-ANWAHVRPEIFALI 165
Query: 94 MDFFSSGLPVLT----------DAQPSSDTVIH-EDDDETVQMIKELLDTRIRPTVQEDG 142
+ +SG ++ +A D++ + E+D E V MIKELL+TRIRP +QEDG
Sbjct: 166 TEAVTSGETIVNVVERKGDEHGEAAVEEDSLAYNENDSEVVGMIKELLETRIRPAIQEDG 225
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GDI+F F+ G V LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 226 GDIEFRGFEDGQVMLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 270
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TRIRP +QEDGGDI+F F+DG
Sbjct: 208 MIKELLETRIRPAIQEDGGDIEFRGFEDG 236
>gi|395792964|ref|ZP_10472383.1| hypothetical protein MEI_01004 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|423714482|ref|ZP_17688739.1| hypothetical protein ME1_01466 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395419590|gb|EJF85889.1| hypothetical protein ME1_01466 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395431978|gb|EJF97972.1| hypothetical protein MEI_01004 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 192
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 97/151 (64%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I V VF G+DFITV+K++ + W+ LKP I TIM+ F SG PV
Sbjct: 35 EAAQNSPLAAKLFNIPNVNGVFLGYDFITVSKKEGE--WQHLKPVILGTIMEHFLSGDPV 92
Query: 104 LT---DAQPSSDTV----IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+T AQ + + E D + V IKELL+TR+RP V DGGDI F F+ G+V
Sbjct: 93 ITTNASAQAQTHALNEEFYDEKDADIVLTIKELLETRVRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 153 LNMRGACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V DGGDI F F++G++
Sbjct: 122 IKELLETRVRPAVANDGGDITFRGFENGIV 151
>gi|169608792|ref|XP_001797815.1| hypothetical protein SNOG_07481 [Phaeosphaeria nodorum SN15]
gi|111063827|gb|EAT84947.1| hypothetical protein SNOG_07481 [Phaeosphaeria nodorum SN15]
Length = 263
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/152 (50%), Positives = 97/152 (63%), Gaps = 12/152 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
+ SPL L I+GV SVF G D ITVTK D W +KPE+FA I +F +SG P++
Sbjct: 65 HPSPLAAQLLNIDGVTSVFLGLDHITVTK-DTSTPWAHIKPEVFAIINEFMTSGQPLVNT 123
Query: 106 -------DAQPSSDT---VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
Q +S+ E+D E VQMIKELL+TRIRP++QEDGGDI F F G V
Sbjct: 124 IADKGNEQGQGNSEVDSLAYDENDSEVVQMIKELLETRIRPSIQEDGGDIDFRGFNDGQV 183
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 184 LLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 215
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TRIRP++QEDGGDI F F DG
Sbjct: 153 MIKELLETRIRPSIQEDGGDIDFRGFNDG 181
>gi|58697437|ref|ZP_00372735.1| NifU domain protein [Wolbachia endosymbiont of Drosophila simulans]
gi|58536136|gb|EAL59746.1| NifU domain protein [Wolbachia endosymbiont of Drosophila simulans]
Length = 190
Score = 142 bits (357), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 99/158 (62%), Gaps = 6/158 (3%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G+T DF S L LF+IE V VFFGHDFI+VTK ++W LK EI TIM
Sbjct: 26 GETTDFSNANEIKNSKLAANLFQIEHVVRVFFGHDFISVTKLGG-INWDTLKVEILTTIM 84
Query: 95 DFFSSGLPVL-----TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
D F+SG L D + ++D E V IKEL+++ I+P V +DGGDI+F
Sbjct: 85 DHFTSGGKALDKEGVNDNNIPDEEFFDKNDIEIVNRIKELMESYIKPAVAQDGGDIKFRG 144
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++ G+V +++QG+C+ CPS+ +TLK GVQNML ++IPE
Sbjct: 145 YKDGIVYVELQGACSGCPSAAITLKQGVQNMLSYHIPE 182
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL+++ I+P V +DGGDI+F ++DG++
Sbjct: 121 IKELMESYIKPAVAQDGGDIKFRGYKDGIV 150
>gi|358378221|gb|EHK15903.1| hypothetical protein TRIVIDRAFT_65266 [Trichoderma virens Gv29-8]
Length = 289
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/164 (47%), Positives = 101/164 (61%), Gaps = 16/164 (9%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P + SPL L I+G+ SVF+G DFITVTK D +W ++PEIFA I
Sbjct: 96 PRATISPP-----HPSPLAAKLMNIDGITSVFYGADFITVTKAGD-ANWAHVRPEIFALI 149
Query: 94 MDFFSSG---LPVLTDAQPSSDTVIHED-------DDETVQMIKELLDTRIRPTVQEDGG 143
+ +SG + V+ + S + ED D E V MIKELL+TRIRP +QEDGG
Sbjct: 150 TEAITSGETIVNVVERKEGESAAAVEEDSLAYNENDSEVVGMIKELLETRIRPAIQEDGG 209
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI+F F+ G V LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 210 DIEFRGFEDGQVLLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 253
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TRIRP +QEDGGDI+F F+DG
Sbjct: 191 MIKELLETRIRPAIQEDGGDIEFRGFEDG 219
>gi|79313311|ref|NP_001030735.1| NifU-like protein 4 [Arabidopsis thaliana]
gi|332642928|gb|AEE76449.1| NifU-like protein 4 [Arabidopsis thaliana]
Length = 222
Score = 142 bits (357), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 87/116 (75%), Gaps = 3/116 (2%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K ++ I+GV VFFG DF+TVTK DD V W +LKPEIFA +MDF
Sbjct: 106 SADFPNVRSALGSPLAKSIYSIDGVVRVFFGSDFVTVTKSDD-VSWDILKPEIFAAVMDF 164
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
+SSG P+ D+Q ++ DT I EDD ETV MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 165 YSSGQPLFLDSQAAAAKDTAISEDDSETVAMIKELLETRIRPAVQDDGGDIEYCGF 220
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 195 MIKELLETRIRPAVQDDGGDIEYCGF 220
>gi|150395264|ref|YP_001325731.1| scaffold protein Nfu/NifU [Sinorhizobium medicae WSM419]
gi|150026779|gb|ABR58896.1| Scaffold protein Nfu/NifU [Sinorhizobium medicae WSM419]
Length = 188
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 97/149 (65%), Gaps = 7/149 (4%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A SPL LF I G+ V+FG+DFITV+K+ + W+ LKP I +IM+ F SG P+
Sbjct: 35 EALAGSPLAARLFSIPGITGVYFGYDFITVSKEAQE--WQHLKPAILGSIMEHFMSGQPI 92
Query: 104 LTDAQPSS-----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
++ A + + E D+ V IKELL+TR+RP V +DGGDI F F+ G V L
Sbjct: 93 MSGAGRAEQLDEDEEFFDEGDEAIVATIKELLETRVRPAVAQDGGDITFRGFKDGTVFLN 152
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
M+G+C+ CPSS TL++GVQN+L+ ++PE
Sbjct: 153 MKGACSGCPSSTATLRHGVQNLLRHFVPE 181
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F F+DG +
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGFKDGTV 149
>gi|92115649|ref|YP_575378.1| nitrogen-fixing NifU-like [Nitrobacter hamburgensis X14]
gi|91798543|gb|ABE60918.1| nitrogen-fixing NifU-like protein [Nitrobacter hamburgensis X14]
Length = 191
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 100/157 (63%), Gaps = 11/157 (7%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F A S L LF + GV VF+G DFITVTK D DW+ LKP I IM+
Sbjct: 27 TMEFNGPDTAGRSQLAVRLFAVHGVTGVFYGSDFITVTK--DASDWQHLKPAILGVIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTVIHED---------DDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ SG P+L D + + + ++D D ETV +IK+L++TR+RP V +DGGDI F
Sbjct: 85 YMSGAPLLADGETAGNDEANKDEAVEFFDEADAETVTLIKDLIETRVRPGVADDGGDITF 144
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFY 184
F+ GVV + M+GSC+ CPSS VTL+NG+QN+L+ +
Sbjct: 145 RGFKDGVVYVNMKGSCSGCPSSTVTLRNGIQNLLKHF 181
Score = 44.7 bits (104), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+L++TR+RP V +DGGDI F F+DGV+
Sbjct: 122 LIKDLIETRVRPGVADDGGDITFRGFKDGVV 152
>gi|440486025|gb|ELQ65929.1| HIRA-interacting protein 5 [Magnaporthe oryzae P131]
Length = 323
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 102/165 (61%), Gaps = 20/165 (12%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L I+GV+SVF+G DFITVTK D +W ++PEIF+ I
Sbjct: 110 PRSTIAPP-----YPSPLAAQLMNIDGVQSVFYGADFITVTKASD-ANWAHIRPEIFSLI 163
Query: 94 MDFFSSGLPVLT----------DAQPSSDTV----IHEDDDETVQMIKELLDTRIRPTVQ 139
+ +SG ++ D Q +S V +E+D E V MIKELL+TRIRP +Q
Sbjct: 164 TEAITSGQKIVNIVERTDASGEDGQETSGEVDSLSYNENDSEVVGMIKELLETRIRPAIQ 223
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFY 184
EDGGDI+F F+ G V LK++G+C +C SS VTLKNG++ ML Y
Sbjct: 224 EDGGDIEFREFEDGNVLLKLRGACRTCDSSTVTLKNGIEGMLMHY 268
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TRIRP +QEDGGDI+F F+DG
Sbjct: 209 MIKELLETRIRPAIQEDGGDIEFREFEDG 237
>gi|329891163|ref|ZP_08269506.1| scaffold protein Nfu/NifU family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846464|gb|EGF96028.1| scaffold protein Nfu/NifU family protein [Brevundimonas diminuta
ATCC 11568]
Length = 185
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 100/154 (64%), Gaps = 4/154 (2%)
Query: 38 IDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFF 97
+++ T A SPL + LF +EGV+ VFFG D++++T+ DW +K I + IMD F
Sbjct: 28 LEYRTIDEAAASPLAEALFELEGVEGVFFGADYVSITRAAHGPDWTEMKAPILSVIMDHF 87
Query: 98 SSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVV 155
SG P++ + + +++ +D E V IK LLD+RIRP V +DGGDI F F + GV+
Sbjct: 88 VSGAPLVREGETATEDA--GEDTEIVAEIKSLLDSRIRPAVAQDGGDILFDHFDEETGVL 145
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+L+M+G+C CPSS TLK GV+ M++ Y+PE T
Sbjct: 146 RLRMRGACAGCPSSSATLKAGVEQMMRHYVPEVT 179
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD--GVL 31
IK LLD+RIRP V +DGGDI F F + GVL
Sbjct: 114 IKSLLDSRIRPAVAQDGGDILFDHFDEETGVL 145
>gi|406602052|emb|CCH46372.1| hypothetical protein BN7_5965 [Wickerhamomyces ciferrii]
Length = 259
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/161 (45%), Positives = 109/161 (67%), Gaps = 14/161 (8%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G+T+++ +G+ A+ SPL K LF I+G+K+V FG +FITV K+ + W L+KPEIF+ +
Sbjct: 65 GETVEYLSGREAFSSPLAKKLFAIDGIKTVMFGSNFITVEKKPS-IQWMLIKPEIFSILT 123
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDET------VQMIKELLDTRIRPTVQEDGGDIQFI 148
+ +SG P+ + DTV+ D V MIKEL+ TRIRP +QEDGGD++F+
Sbjct: 124 ETLTSGEPIFDE-----DTVLPRDAAFDEEDDDIVAMIKELIFTRIRPAIQEDGGDLEFV 178
Query: 149 SFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G V L+++G+C SC SS VTLK+G+++ML+ YI E
Sbjct: 179 KFEEDNGTVWLRLRGACRSCDSSSVTLKHGIESMLKHYIEE 219
Score = 46.2 bits (108), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 25/28 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKEL+ TRIRP +QEDGGD++F+ F++
Sbjct: 155 MIKELIFTRIRPAIQEDGGDLEFVKFEE 182
>gi|440467170|gb|ELQ36408.1| HIRA-interacting protein 5 [Magnaporthe oryzae Y34]
Length = 323
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 102/165 (61%), Gaps = 20/165 (12%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L I+GV+SVF+G DFITVTK D +W ++PEIF+ I
Sbjct: 110 PRSTIAPP-----YPSPLAAQLMNIDGVQSVFYGADFITVTKASD-ANWAHIRPEIFSLI 163
Query: 94 MDFFSSGLPVLT----------DAQPSSDTV----IHEDDDETVQMIKELLDTRIRPTVQ 139
+ +SG ++ D Q +S V +E+D E V MIKELL+TRIRP +Q
Sbjct: 164 TEAITSGQKIVNIVERTDASGEDGQETSGEVDSLSYNENDSEVVGMIKELLETRIRPAIQ 223
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFY 184
EDGGDI+F F+ G V LK++G+C +C SS VTLKNG++ ML Y
Sbjct: 224 EDGGDIEFRGFEDGNVLLKLRGACRTCDSSTVTLKNGIEGMLMHY 268
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TRIRP +QEDGGDI+F F+DG
Sbjct: 209 MIKELLETRIRPAIQEDGGDIEFRGFEDG 237
>gi|320585764|gb|EFW98443.1| NifU [Grosmannia clavigera kw1407]
Length = 370
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/163 (44%), Positives = 99/163 (60%), Gaps = 23/163 (14%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL-- 104
Y SPL L ++GV +VF+G DFITVTK D +W ++PE+FA I + +SG ++
Sbjct: 161 YPSPLAAQLMNVDGVTAVFYGSDFITVTKATD-ANWAHIRPEVFALITEAITSGQAIVRP 219
Query: 105 -------------TDAQPSSDTVIHED-------DDETVQMIKELLDTRIRPTVQEDGGD 144
T + + +HED D E V MIKELL+TRIRP +QEDGGD
Sbjct: 220 SATGSAGAEGVDGTHGEGAEAEAVHEDSLQYNENDSEVVGMIKELLETRIRPAIQEDGGD 279
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
I+F F+ G V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 280 IEFRGFEDGEVLLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 322
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TRIRP +QEDGGDI+F F+DG
Sbjct: 260 MIKELLETRIRPAIQEDGGDIEFRGFEDG 288
>gi|451942474|ref|YP_007463111.1| NifU-related protein [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
gi|451901861|gb|AGF76323.1| NifU-related protein [Bartonella vinsonii subsp. berkhoffii str.
Winnie]
Length = 192
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/152 (48%), Positives = 96/152 (63%), Gaps = 11/152 (7%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I V VF G+DFITV+K++ + W+ LKP I TIM+ F SG PV
Sbjct: 35 EAAQNSPLAAKLFNIPNVNGVFLGYDFITVSKKEGE--WQHLKPVILGTIMEHFLSGDPV 92
Query: 104 LTDAQPSSDTVIH--------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
+T S+ H E D + V IKELL+TR+RP V DGGDI F F+ G+V
Sbjct: 93 IT-TNTSTQAQTHALNEEFYDEKDADIVLTIKELLETRVRPAVANDGGDITFRGFENGIV 151
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 152 YLNMRGACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 44.7 bits (104), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V DGGDI F F++G++
Sbjct: 122 IKELLETRVRPAVANDGGDITFRGFENGIV 151
>gi|398411907|ref|XP_003857287.1| hypothetical protein MYCGRDRAFT_107316 [Zymoseptoria tritici
IPO323]
gi|339477172|gb|EGP92263.1| hypothetical protein MYCGRDRAFT_107316 [Zymoseptoria tritici
IPO323]
Length = 317
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 100/153 (65%), Gaps = 13/153 (8%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
+ SPL L ++GV SVF+G D+ITVTK D W +KPE+FA I + ++G P++
Sbjct: 126 HPSPLAAQLMNVDGVTSVFYGKDYITVTK-DSTTPWPHVKPEVFALITEAVTTGQPIVNT 184
Query: 106 -------DAQPSSDTVIHE----DDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
+ Q SS++ + +D+E V MI+ELLDTRIRP +QEDGGDI+F F G
Sbjct: 185 VENKTGEEGQGSSNSEVTATYDPEDEEVVGMIQELLDTRIRPAIQEDGGDIEFRGFHDGQ 244
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 245 VMLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 277
Score = 52.8 bits (125), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI+ELLDTRIRP +QEDGGDI+F F DG
Sbjct: 215 MIQELLDTRIRPAIQEDGGDIEFRGFHDG 243
>gi|90076830|dbj|BAE88095.1| unnamed protein product [Macaca fascicularis]
Length = 199
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/100 (68%), Positives = 84/100 (84%), Gaps = 1/100 (1%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++D+DW LLKP+I+ATIMD
Sbjct: 84 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEDLDWNLLKPDIYATIMD 143
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIR 135
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIR
Sbjct: 144 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIR 182
>gi|312113945|ref|YP_004011541.1| Scaffold protein Nfu/NifU [Rhodomicrobium vannielii ATCC 17100]
gi|311219074|gb|ADP70442.1| Scaffold protein Nfu/NifU [Rhodomicrobium vannielii ATCC 17100]
Length = 184
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 105/162 (64%), Gaps = 10/162 (6%)
Query: 34 PGQTI------DFPTGQ-AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
PG+T+ +F T A SPL LF +EGV +VF G DF++VTK D DW+ LK
Sbjct: 18 PGRTVLEEGTREFLTSDDAEGVSPLAARLFEVEGVTAVFLGSDFVSVTK--DRGDWESLK 75
Query: 87 PEIFATIMDFFSSGLPVLTDAQP-SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
P + IM+ F SG PVL+D + + D + D E V IKEL++TR+RP V DGGDI
Sbjct: 76 PPVLGVIMEHFMSGQPVLSDERHVAEDEDFDDADKEVVTTIKELIETRVRPAVANDGGDI 135
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F+ GVV LKMQG+C+ CPS+ TL++G++N+L+ ++PE
Sbjct: 136 TFKGFRDGVVYLKMQGACSGCPSATATLRHGIENLLKHFVPE 177
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++TR+RP V DGGDI F F+DGV+
Sbjct: 116 IKELIETRVRPAVANDGGDITFKGFRDGVV 145
>gi|170747078|ref|YP_001753338.1| scaffold protein Nfu/NifU [Methylobacterium radiotolerans JCM 2831]
gi|170653600|gb|ACB22655.1| Scaffold protein Nfu/NifU [Methylobacterium radiotolerans JCM 2831]
Length = 188
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 90/137 (65%), Gaps = 4/137 (2%)
Query: 55 LFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPS---- 110
LF + GV V+FGHDFI+VTK +D +W +KP + IM+ F SG PV+ +
Sbjct: 45 LFTVPGVAGVYFGHDFISVTKAEDGSEWAQVKPAVLGAIMEHFQSGAPVMAEGGHGEIEP 104
Query: 111 SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSV 170
D E D +TV IK+LL+TR+RP V DGGDI F ++ GVV L+M+G+C+ CPSS
Sbjct: 105 GDEFYDEADHDTVVTIKDLLETRVRPAVAGDGGDITFRGYKEGVVYLEMKGACSGCPSST 164
Query: 171 VTLKNGVQNMLQFYIPE 187
TL++GVQN+ + ++PE
Sbjct: 165 ATLRHGVQNLFRHFLPE 181
Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
IK+LL+TR+RP V DGGDI F +++GV LE G P+ A
Sbjct: 120 IKDLLETRVRPAVAGDGGDITFRGYKEGVVYLEMKGACSGCPSSTA 165
>gi|339319560|ref|YP_004679255.1| NifU domain-containing protein [Candidatus Midichloria mitochondrii
IricVA]
gi|338225685|gb|AEI88569.1| NifU domain protein [Candidatus Midichloria mitochondrii IricVA]
Length = 197
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 102/162 (62%), Gaps = 4/162 (2%)
Query: 28 DGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
+ + P T F + +PL K L +I+G KSVF +FI+VTK ++++ W LK
Sbjct: 31 ESAVLRPNFTASFFNIEECTNAPLAKYLLQIKGTKSVFLASEFISVTK-ENELSWDSLKT 89
Query: 88 EIFATIMDFFSSGLPVLTDA--QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
I A IMD + +G PV+ ++ P +T HE D V I+E++D ++RP V EDGGDI
Sbjct: 90 LIMAAIMDHYMAGYPVVLESFYTPQENTK-HEVSDAIVNQIREIIDNKVRPAVAEDGGDI 148
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F+ G++ L+M G+C+ CPSS VTLK+G++ ML+ Y+PE
Sbjct: 149 MFHKFENGIIYLEMYGACSGCPSSAVTLKSGIEKMLKHYVPE 190
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
I+E++D ++RP V EDGGDI F F++G+ LE G P+ S + K+L
Sbjct: 129 IREIIDNKVRPAVAEDGGDIMFHKFENGIIYLEMYGACSGCPSSAVTLKSGIEKML 184
>gi|418296827|ref|ZP_12908670.1| hypothetical protein ATCR1_04879 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539002|gb|EHH08244.1| hypothetical protein ATCR1_04879 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 187
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 97/156 (62%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F A SPL + LF I GV V+FG DFITVTK D +W+ LKP I IM+
Sbjct: 27 TVEFLNPSQAQASPLAERLFTIPGVTGVYFGFDFITVTK--DGAEWQHLKPAILGAIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDET-----VQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
F SG P++ A + + + E V IKELLDTR+RP V +DGGDI F F+
Sbjct: 85 FMSGRPIMGTAIAAEVSDEEGEFFEEGDETIVATIKELLDTRVRPAVAQDGGDITFRGFR 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L M+G+C+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 DGTVFLNMKGACSGCPSSTATLKHGVQNLLRHFVPE 180
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F+DG +
Sbjct: 119 IKELLDTRVRPAVAQDGGDITFRGFRDGTV 148
>gi|86747711|ref|YP_484207.1| nitrogen-fixing NifU-like [Rhodopseudomonas palustris HaA2]
gi|86570739|gb|ABD05296.1| Nitrogen-fixing NifU-like [Rhodopseudomonas palustris HaA2]
Length = 188
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 99/154 (64%), Gaps = 8/154 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F A SPL + LF ++GV VF+G DF+TVTK D DW+ LKP I IM+
Sbjct: 27 TMEFTDRSQAARSPLAERLFDVDGVSGVFYGSDFVTVTK--DGGDWQHLKPAILGAIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTV------IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
+ SG P+L D + D E D ETV++IK+L++TR+RP V DGGDI F F
Sbjct: 85 YMSGAPILADGKTDGDAGDEDDEFFAERDAETVEIIKDLIETRVRPAVANDGGDITFRGF 144
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFY 184
+ G+V L M+G+C+ CPSS TL++G+QN+L+ +
Sbjct: 145 KDGIVYLAMKGACSGCPSSTATLQHGIQNLLKHF 178
Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+L++TR+RP V DGGDI F F+DG++
Sbjct: 119 IIKDLIETRVRPAVANDGGDITFRGFKDGIV 149
>gi|367035304|ref|XP_003666934.1| hypothetical protein MYCTH_2097429 [Myceliophthora thermophila ATCC
42464]
gi|347014207|gb|AEO61689.1| hypothetical protein MYCTH_2097429 [Myceliophthora thermophila ATCC
42464]
Length = 336
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 104/179 (58%), Gaps = 31/179 (17%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L I+GV SVF+G DFITVTK D +W ++PE+FA I
Sbjct: 116 PRSTIAPP-----YPSPLAAQLMNIDGVTSVFYGADFITVTKAAD-ANWAHIRPEVFALI 169
Query: 94 MDFFSSGLPVLTDAQ------------------------PSSDTVIH-EDDDETVQMIKE 128
+ +SG P++ A+ D++ + E+D E V MIKE
Sbjct: 170 TEAITSGQPIVNVAERREGSAASSGGAGAAGGAREGAEAAEQDSLAYDENDSEVVGMIKE 229
Query: 129 LLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LL+TR+RP +QEDGGDI+F F+ G V LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 230 LLETRVRPAIQEDGGDIEFRGFENGYVLLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 288
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TR+RP +QEDGGDI+F F++G +
Sbjct: 226 MIKELLETRVRPAIQEDGGDIEFRGFENGYV 256
>gi|116199405|ref|XP_001225514.1| hypothetical protein CHGG_07858 [Chaetomium globosum CBS 148.51]
gi|88179137|gb|EAQ86605.1| hypothetical protein CHGG_07858 [Chaetomium globosum CBS 148.51]
Length = 337
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 100/161 (62%), Gaps = 21/161 (13%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL L I+GV +VF+G DFITVTK D +W ++PE+FA I + +SG P++
Sbjct: 130 HPSPLAAQLMNIDGVTAVFYGADFITVTKAAD-ANWAHVRPEVFALITEAITSGQPIVNV 188
Query: 107 AQ-------------------PSSDTVIH-EDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
A+ D++ + E+D E V MIKELL+TR+RP +QEDGGDI+
Sbjct: 189 AERKEGGGGVGGAAGEGEGAAEEKDSLAYDENDSEVVGMIKELLETRVRPAIQEDGGDIE 248
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F F+ G V LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 249 FRGFENGYVMLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 289
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TR+RP +QEDGGDI+F F++G +
Sbjct: 227 MIKELLETRVRPAIQEDGGDIEFRGFENGYV 257
>gi|395785693|ref|ZP_10465421.1| hypothetical protein ME5_00739 [Bartonella tamiae Th239]
gi|423717415|ref|ZP_17691605.1| hypothetical protein MEG_01145 [Bartonella tamiae Th307]
gi|395424151|gb|EJF90338.1| hypothetical protein ME5_00739 [Bartonella tamiae Th239]
gi|395427630|gb|EJF93721.1| hypothetical protein MEG_01145 [Bartonella tamiae Th307]
Length = 190
Score = 141 bits (355), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 93/148 (62%), Gaps = 7/148 (4%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
A+ SPL LF I GV VFFG+DFITVTK D+ +W LKP I TIM+ F S LPV+
Sbjct: 36 ASKKSPLAAKLFAIPGVCGVFFGYDFITVTK--DNGEWPHLKPAILGTIMEHFMSDLPVM 93
Query: 105 TDAQ-----PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
+ + E D V+ IKEL++TR+RP V DGGDI F F G+V L M
Sbjct: 94 AGHTVMTNDENGEEFFDEKDGTIVEAIKELIETRVRPAVANDGGDITFRGFDHGIVYLNM 153
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+GSC CPSS TLK+G++N+L+ ++PE
Sbjct: 154 RGSCAGCPSSTATLKHGIENLLRHFVPE 181
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++TR+RP V DGGDI F F G++
Sbjct: 120 IKELIETRVRPAVANDGGDITFRGFDHGIV 149
>gi|338741591|ref|YP_004678553.1| NifU-like protein [Hyphomicrobium sp. MC1]
gi|337762154|emb|CCB67989.1| NifU-like [Hyphomicrobium sp. MC1]
Length = 184
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 96/153 (62%), Gaps = 4/153 (2%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + A SPL LF I+GV VF G DFI+VTK +++W+ LKP + IM+
Sbjct: 27 TADFRSKGDAVASPLAARLFAIDGVNGVFLGSDFISVTK--GNIEWQHLKPMVLGAIMEH 84
Query: 97 FSSGLPVL--TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
+ SG DA SS D+ V IKELL+TR+RP V +DGGDI F F+ GV
Sbjct: 85 YMSGATATDEEDANDSSAENYDPQDESIVATIKELLETRVRPAVAQDGGDITFSGFRDGV 144
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V L M+G+C+ CPSS TL++G++N+L+ ++PE
Sbjct: 145 VYLHMRGACSGCPSSTATLRHGIENLLKHFLPE 177
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F F+DGV+
Sbjct: 116 IKELLETRVRPAVAQDGGDITFSGFRDGVV 145
>gi|300175875|emb|CBK21871.2| Scaffold protein Isu1 [Blastocystis hominis]
Length = 271
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/159 (47%), Positives = 100/159 (62%), Gaps = 7/159 (4%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T++F T + A SPL LF I VKSV G+D+I VT+Q V+W+ L P IF TI+
Sbjct: 57 GHTMEFNTTKEARASPLASKLFDIPEVKSVLLGNDYICVTRQKG-VEWEYLNPAIFHTIL 115
Query: 95 DFFSS----GLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
DFFSS + + D P I + D E V++IKELLDTRIRP ++ DGGDI F +F
Sbjct: 116 DFFSSPDHEAVVLKPDEIPEDPNEIKDTDSEVVRLIKELLDTRIRPRIKADGGDIFFHTF 175
Query: 151 --QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G + ++M G+C C SS VTLK GV+ M++ YIPE
Sbjct: 176 DESSGELLVRMTGACKGCASSSVTLKQGVEQMMKHYIPE 214
Score = 43.1 bits (100), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
+IKELLDTRIRP ++ DGGDI F +F E G+ + TG C+
Sbjct: 150 LIKELLDTRIRPRIKADGGDIFFHTFD----ESSGELLVRMTGACKGCA 194
>gi|346323858|gb|EGX93456.1| NifU-related protein [Cordyceps militaris CM01]
Length = 498
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 117/198 (59%), Gaps = 27/198 (13%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGV 61
+K L + R+ P +G F+ + + P TI P + SPL L I+GV
Sbjct: 171 LKFLPNHRVLP----EGFAAPFVEYMN-----PRATIAPP-----HPSPLAAKLMNIDGV 216
Query: 62 KSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT----------DAQPSS 111
SVF+G DFITVTK D +W ++PEIFA I + ++G ++T + +
Sbjct: 217 TSVFYGADFITVTKAGD-ANWAHIRPEIFALITEAITAGETIVTVKEMPAGADGAVEAEA 275
Query: 112 DTVIH-EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGSCTSCPSS 169
D++ + EDD E V MIKELL+TRIRP +QEDGGDI+F F + G V LK++G+C +C SS
Sbjct: 276 DSLAYNEDDSEVVGMIKELLETRIRPAIQEDGGDIEFRGFDEEGFVNLKLRGACRTCDSS 335
Query: 170 VVTLKNGVQNMLQFYIPE 187
VTLKNG++ ML YI E
Sbjct: 336 TVTLKNGIEGMLMHYIEE 353
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP +QEDGGDI+F F +
Sbjct: 290 MIKELLETRIRPAIQEDGGDIEFRGFDE 317
>gi|440635801|gb|ELR05720.1| hypothetical protein GMDG_07563 [Geomyces destructans 20631-21]
Length = 319
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 114/197 (57%), Gaps = 26/197 (13%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGV 61
+K L + R+ P +G FI + P T+ P + SPL L I+G+
Sbjct: 90 LKFLPNQRVLP----EGLSTPFIEYMS-----PRSTLAPP-----HPSPLAANLMNIDGI 135
Query: 62 KSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSG--LPVLTDAQPSS-------- 111
SVF+G DFITVTK D +W +KPE+F+ I + +SG + +T+ +P
Sbjct: 136 TSVFYGVDFITVTKAAD-ANWAHIKPEVFSLITEAVTSGQHMVNITENKPGEQQHEGAEE 194
Query: 112 -DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSV 170
+E+D E V MIKELL+TRIRP +QEDGGDI F F+GG V LK++G+C +C SS
Sbjct: 195 DSLAYNENDSEVVGMIKELLETRIRPAIQEDGGDIDFKGFEGGNVLLKLRGACRTCDSST 254
Query: 171 VTLKNGVQNMLQFYIPE 187
VTLKNG++ ML YI E
Sbjct: 255 VTLKNGIEGMLMHYIEE 271
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TRIRP +QEDGGDI F F+ G
Sbjct: 209 MIKELLETRIRPAIQEDGGDIDFKGFEGG 237
>gi|88658493|ref|YP_507026.1| NifU domain-containing protein [Ehrlichia chaffeensis str.
Arkansas]
gi|88599950|gb|ABD45419.1| NifU domain protein [Ehrlichia chaffeensis str. Arkansas]
Length = 186
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/166 (43%), Positives = 104/166 (62%), Gaps = 3/166 (1%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G+ G+ +F AA S L LF+IE VKSVFFG DF++VTK DD ++W
Sbjct: 14 LKFMPGMPINNGKVSEFADSVAAEGSSLATALFKIEYVKSVFFGGDFVSVTKSDD-IEWD 72
Query: 84 LLKPEIFATIMDFFSSGLPVLTDA--QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQED 141
+LKPEI IM+F + T++ Q + E D E V IKEL+D ++P V +D
Sbjct: 73 VLKPEILTVIMEFLTLNSDNATESFDQEELEEFFDEKDIEMVGKIKELIDNYVKPAVIQD 132
Query: 142 GGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GGDI+F + G+V +K++G+C+ CPS+ +TLK G+ NML +YIP+
Sbjct: 133 GGDIKFKGYSNGIVFVKLRGACSGCPSASITLKEGIYNMLSYYIPD 178
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL+D ++P V +DGGDI+F + +G++
Sbjct: 117 IKELIDNYVKPAVIQDGGDIKFKGYSNGIV 146
>gi|338714224|ref|XP_003363028.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Equus caballus]
Length = 113
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
Query: 94 MDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
MDFF+SGLP++T+ + SS E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G
Sbjct: 1 MDFFASGLPLVTE-ETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDG 59
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+V+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 60 IVQLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 93
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 31 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 62
>gi|58584670|ref|YP_198243.1| NifU family protein [Wolbachia endosymbiont strain TRS of Brugia
malayi]
gi|58418986|gb|AAW71001.1| NifU family protein containing thioredoxin-like domain [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 190
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/159 (45%), Positives = 99/159 (62%), Gaps = 6/159 (3%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T DF S L LF+IE V VFFGHDFI+VTK D + W +LK EI T+MD
Sbjct: 27 ETADFSNPDEIKNSKLAADLFQIEHVIRVFFGHDFISVTKSDG-ISWDILKVEILTTVMD 85
Query: 96 FFSSGLPVL-----TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F+SG L D + E+D E V IKEL++ I+P V +DGGDI+F +
Sbjct: 86 HFTSGGKALDRKGVNDNNIPDEEFFDENDIEIVNRIKELMENYIKPAVAQDGGDIKFRGY 145
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+ G+V +++QG+C+ CPS+ +TLK GVQNML ++IPE +
Sbjct: 146 KDGIVYVELQGACSGCPSAAITLKQGVQNMLCYHIPEVS 184
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++ I+P V +DGGDI+F ++DG++
Sbjct: 121 IKELMENYIKPAVAQDGGDIKFRGYKDGIV 150
>gi|417858732|ref|ZP_12503789.1| hypothetical protein Agau_C101562 [Agrobacterium tumefaciens F2]
gi|338824736|gb|EGP58703.1| hypothetical protein Agau_C101562 [Agrobacterium tumefaciens F2]
Length = 187
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 97/156 (62%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F A SPL + LF I GV V+FG DFITVTK D +W+ LKP I +IM+
Sbjct: 27 TAEFLNPAQAQASPLAERLFTIPGVTGVYFGFDFITVTK--DGAEWQHLKPAILGSIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDET-----VQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
F SG P++ A + + + E V IKELLDTR+RP V +DGGDI F F+
Sbjct: 85 FMSGRPIMGTAIAAEVSDEEGEFFEEGDETIVATIKELLDTRVRPAVAQDGGDITFRGFR 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L M+G+C+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 DGTVFLNMKGACSGCPSSTATLKHGVQNLLRHFVPE 180
Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLDTR+RP V +DGGDI F F+DG +
Sbjct: 119 IKELLDTRVRPAVAQDGGDITFRGFRDGTV 148
>gi|83944990|ref|ZP_00957356.1| nifU domain protein [Oceanicaulis sp. HTCC2633]
gi|83851772|gb|EAP89627.1| nifU domain protein [Oceanicaulis sp. HTCC2633]
Length = 186
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 99/164 (60%), Gaps = 9/164 (5%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ++ DF T + A S L + LFR+EGV VF G DFI+VTK + VDW +KP
Sbjct: 18 PGQSVSLDAPRDFATPEEAESSYLARELFRVEGVIRVFAGQDFISVTKAEG-VDWPHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ IMD SG + +DA + V+ IK+++DTR+RP V DGGDI F
Sbjct: 77 AVLGAIMDCLESGKSLFSDADDDGHAAYEGEAAGIVKEIKDVIDTRVRPAVARDGGDIVF 136
Query: 148 ISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
S+ GVV L M+G+C CPSS +TLK G++N+L+ Y+PE +
Sbjct: 137 HSYDEATGVVNLHMRGACAGCPSSTMTLKQGIENLLKHYVPEVS 180
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IK+++DTR+RP V DGGDI F S+ +
Sbjct: 115 IKDVIDTRVRPAVARDGGDIVFHSYDEA 142
>gi|121601928|ref|YP_989428.1| NifU family protein [Bartonella bacilliformis KC583]
gi|421761234|ref|ZP_16198037.1| NifU family protein [Bartonella bacilliformis INS]
gi|120614105|gb|ABM44706.1| NifU family protein [Bartonella bacilliformis KC583]
gi|411173018|gb|EKS43066.1| NifU family protein [Bartonella bacilliformis INS]
Length = 192
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 93/150 (62%), Gaps = 9/150 (6%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
AA SPL LF+I V V G+DFITVTK D + W+ LKP I TIM+ S P++
Sbjct: 36 AALGSPLAAKLFQISNVSGVLLGYDFITVTKSDGE--WQHLKPVILGTIMEHLLSNAPIV 93
Query: 105 -TDAQPSSDTVIH------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKL 157
T A + + H E D + V IKELL+TR+RP V DGGDI F F+ G+V L
Sbjct: 94 STGAAAHAQSHTHNEEFYDEKDADIVSTIKELLETRVRPAVANDGGDITFRGFEHGIVYL 153
Query: 158 KMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 154 NMRGACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 44.7 bits (104), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V DGGDI F F+ G++
Sbjct: 122 IKELLETRVRPAVANDGGDITFRGFEHGIV 151
>gi|148284929|ref|YP_001249019.1| hypothetical protein OTBS_1710 [Orientia tsutsugamushi str.
Boryong]
gi|189184851|ref|YP_001938636.1| thioredoxin-like protein [Orientia tsutsugamushi str. Ikeda]
gi|146740368|emb|CAM80805.1| conserved hypothetical protein [Orientia tsutsugamushi str.
Boryong]
gi|189181622|dbj|BAG41402.1| thioredoxin-like protein [Orientia tsutsugamushi str. Ikeda]
Length = 182
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/154 (45%), Positives = 103/154 (66%), Gaps = 2/154 (1%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
PG + F T + S L + LF IE VK VFFG DFITVTK D W+++KPEI +
Sbjct: 24 PGNPVHFSTREECTHSILARKLFSIENVKEVFFGEDFITVTKVSDG-SWEVIKPEILTML 82
Query: 94 MDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
MD F +GLPV +++ + + E + I E+++T++RP V DGGDI++ SF+ G
Sbjct: 83 MDHFVAGLPVF-ESEAEKKNIEQANLSEIEKQIIEIINTKVRPAVAMDGGDIEYHSFKDG 141
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+VKL+M+G+C CPSS +TLK G++++L++YIPE
Sbjct: 142 IVKLQMRGACVGCPSSTMTLKQGIESLLKYYIPE 175
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 22/26 (84%)
Query: 7 DTRIRPTVQEDGGDIQFISFQDGVLE 32
+T++RP V DGGDI++ SF+DG+++
Sbjct: 119 NTKVRPAVAMDGGDIEYHSFKDGIVK 144
>gi|395790363|ref|ZP_10469853.1| hypothetical protein ME9_01570 [Bartonella taylorii 8TBB]
gi|395426234|gb|EJF92362.1| hypothetical protein ME9_01570 [Bartonella taylorii 8TBB]
Length = 192
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 96/151 (63%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I V VF G+DFITV+K++ + W+ LKP I TIM+ F S PV
Sbjct: 35 EAAKNSPLAAKLFNIPNVNGVFLGYDFITVSKKEGE--WQHLKPVILGTIMEHFLSNDPV 92
Query: 104 LTD---AQPSSDTV----IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+T AQ + + E D + V IKELL+TRIRP V DGGDI F F+ G+V
Sbjct: 93 ITTNATAQAQTHALNEEFYDEKDADIVLTIKELLETRIRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 153 LNMRGACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TRIRP V DGGDI F F++G++
Sbjct: 122 IKELLETRIRPAVANDGGDITFRGFENGIV 151
>gi|260949769|ref|XP_002619181.1| hypothetical protein CLUG_00340 [Clavispora lusitaniae ATCC 42720]
gi|238846753|gb|EEQ36217.1| hypothetical protein CLUG_00340 [Clavispora lusitaniae ATCC 42720]
Length = 237
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 116/190 (61%), Gaps = 10/190 (5%)
Query: 5 LLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSV 64
L + PT E+ ++F+S + + +T +F T A SPL LF++ GVKSV
Sbjct: 13 FLSFKTYPTPNENA--LKFVSPEAEISPLKNKTFEFSTSLQAVHSPLALKLFKLNGVKSV 70
Query: 65 FFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSG-LPVLTDA---QPSSDTV-IHEDD 119
GHDF+TV K D V+W L+PE+ + F +S PV+T Q +D++ E+D
Sbjct: 71 MIGHDFLTVNKLDH-VNWAHLRPEVVKLLDSFLTSKDEPVITKELIQQGENDSLSASEND 129
Query: 120 DETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGV 177
E V MIKEL+DTRIRP +Q+DGGDI++ +F + G V LK+QG+C SC +S TLK G+
Sbjct: 130 SEVVSMIKELIDTRIRPAIQDDGGDIEYKAFDEETGTVFLKLQGACKSCSASEDTLKGGI 189
Query: 178 QNMLQFYIPE 187
++ML YI E
Sbjct: 190 ESMLMHYIEE 199
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKEL+DTRIRP +Q+DGGDI++ +F EE G G CS
Sbjct: 135 MIKELIDTRIRPAIQDDGGDIEYKAFD----EETGTVFLKLQGACKSCS 179
>gi|380490165|emb|CCF36199.1| hypothetical protein CH063_01450 [Colletotrichum higginsianum]
Length = 318
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 105/172 (61%), Gaps = 24/172 (13%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L I+GV SVF+G DFITV+K D +W ++PE+FA I
Sbjct: 116 PRSTIAPP-----YPSPLAAQLMNIDGVTSVFYGADFITVSK-SADANWAHIRPEVFALI 169
Query: 94 MDFFSSGLPVLT--------------DAQPS--SDTVIH-EDDDETVQMIKELLDTRIRP 136
+ +SG ++T + QP D++ + E+D E V MIKELL+TRIRP
Sbjct: 170 TEAITSGQTIVTVSEKKDGGAVGASGEQQPHGEEDSLAYDENDSEVVGMIKELLETRIRP 229
Query: 137 TVQEDGGDIQFISFQG-GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+QEDGGDI+F F GVV LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 230 AIQEDGGDIEFRGFTDEGVVLLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 281
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP +QEDGGDI+F F D
Sbjct: 218 MIKELLETRIRPAIQEDGGDIEFRGFTD 245
>gi|408787218|ref|ZP_11198949.1| scaffold protein Nfu/NifU [Rhizobium lupini HPC(L)]
gi|408486849|gb|EKJ95172.1| scaffold protein Nfu/NifU [Rhizobium lupini HPC(L)]
Length = 187
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 97/156 (62%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F A SPL + LF I GV V+FG DFITVTK D +W+ LKP I IM+
Sbjct: 27 TVEFLNPSQAQASPLAERLFMIPGVTGVYFGFDFITVTK--DGAEWQHLKPAILGAIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDET-----VQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
F SG P++ A + + + E V IKELL+TR+RP V +DGGDI F F+
Sbjct: 85 FMSGRPIMGTAIAAEVSDEEGEFFEEGDETIVATIKELLETRVRPAVAQDGGDITFRGFR 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L M+G+C+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 DGTVFLNMKGACSGCPSSTATLKHGVQNLLRHFVPE 180
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F F+DG +
Sbjct: 119 IKELLETRVRPAVAQDGGDITFRGFRDGTV 148
>gi|299469630|emb|CBN76484.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 282
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/143 (54%), Positives = 94/143 (65%), Gaps = 3/143 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL L +EGV VF G DFIT++K D+ W L+KP +F IMDFF+ G PV+
Sbjct: 107 SPLAVALLSLEGVAGVFLGTDFITISKHDEG-GWTLMKPVVFGEIMDFFAEGKPVMLAEP 165
Query: 109 PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSC 166
+DT I +DDDE V MIKELL R+RP VQEDGGDI + F G V +++ GSC C
Sbjct: 166 VVTDTTILDDDDEVVAMIKELLQERVRPAVQEDGGDIFYRGFDPNTGTVNVQLAGSCVGC 225
Query: 167 PSSVVTLKNGVQNMLQFYIPETT 189
PSS VTLKNGV+ ML YIPE T
Sbjct: 226 PSSTVTLKNGVEKMLMHYIPEVT 248
Score = 41.2 bits (95), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 20/26 (76%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL R+RP VQEDGGDI + F
Sbjct: 182 MIKELLQERVRPAVQEDGGDIFYRGF 207
>gi|388581820|gb|EIM22127.1| HIRA-interacting protein 5 [Wallemia sebi CBS 633.66]
Length = 269
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/158 (49%), Positives = 107/158 (67%), Gaps = 8/158 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F +++ SPL LF I+ ++SVF+G DF+T++KQ+D W +LKPEI++ +M+
Sbjct: 71 TAEFTEAKSSIGSPLAMRLFGIDDIRSVFYGPDFVTISKQEDS-KWNVLKPEIYSILMEH 129
Query: 97 FSSGLPVLTDAQPSS-----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
FSS P+ DA DT I + D E V MIKELLDTRIRP + EDGGDI++ F+
Sbjct: 130 FSSNTPLFRDAAAEEAAGPQDTKILDTDTEIVAMIKELLDTRIRPAIMEDGGDIEYRGFE 189
Query: 152 --GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKLK++GSC C SS VTLK+G++ ML YIPE
Sbjct: 190 EDTGMVKLKLKGSCRGCSSSSVTLKSGIERMLMHYIPE 227
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELLDTRIRP + EDGGDI++ F++
Sbjct: 163 MIKELLDTRIRPAIMEDGGDIEYRGFEE 190
>gi|302657114|ref|XP_003020287.1| hypothetical protein TRV_05641 [Trichophyton verrucosum HKI 0517]
gi|291184105|gb|EFE39669.1| hypothetical protein TRV_05641 [Trichophyton verrucosum HKI 0517]
Length = 304
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 99/158 (62%), Gaps = 13/158 (8%)
Query: 42 TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGL 101
T Q Y SPL L ++G SVFFG DFITVTK D D +W +KPEIF+ I + + G
Sbjct: 111 TLQPPYPSPLAAKLLNVDGAVSVFFGSDFITVTK-DSDANWAHIKPEIFSLITEAITRGE 169
Query: 102 PVLT------------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
++ A+ +E+D+E V MI+ELL+TRIRP +QEDGGDI+F
Sbjct: 170 ALVNVVDVRQGKEGAEGAEAEEAVRYNEEDEEVVGMIQELLETRIRPAIQEDGGDIEFRG 229
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 230 FENGNVLLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 267
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI+ELL+TRIRP +QEDGGDI+F F++G
Sbjct: 205 MIQELLETRIRPAIQEDGGDIEFRGFENG 233
>gi|342883372|gb|EGU83885.1| hypothetical protein FOXB_05599 [Fusarium oxysporum Fo5176]
Length = 316
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 79/165 (47%), Positives = 101/165 (61%), Gaps = 17/165 (10%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L I+GV SVF+G DFITVTK D +W ++PEIFA I
Sbjct: 121 PRATISPP-----YPSPLAAKLMNIDGVTSVFYGADFITVTKAAD-ANWAHIRPEIFALI 174
Query: 94 MDFFSSGLPVLT---------DAQPSSDTVIH-EDDDETVQMIKELLDTRIRPTVQEDGG 143
+ ++G ++T A D++ + EDD E V MIKELL+TRIRP +QEDGG
Sbjct: 175 TEAITAGEKIVTVSERRDGEAGAVEEEDSLAYNEDDSEVVGMIKELLETRIRPAIQEDGG 234
Query: 144 DIQFISFQG-GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI F F G V L+++G+C +C SS VTLKNG++ ML YI E
Sbjct: 235 DIDFRGFDDEGYVHLRLRGACRTCDSSTVTLKNGIEGMLMHYIEE 279
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP +QEDGGDI F F D
Sbjct: 216 MIKELLETRIRPAIQEDGGDIDFRGFDD 243
>gi|410954973|ref|XP_003984133.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
isoform 2 [Felis catus]
Length = 113
Score = 140 bits (352), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/94 (70%), Positives = 81/94 (86%), Gaps = 1/94 (1%)
Query: 94 MDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
MDFF+SGLP++T+ + SS E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G
Sbjct: 1 MDFFASGLPLVTE-ETSSGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDG 59
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+V+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 60 IVQLKLQGSCTSCPSSMITLKNGIQNMLQFYIPE 93
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 31 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 62
>gi|402076063|gb|EJT71486.1| HIRA-interacting protein 5 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 321
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 106/168 (63%), Gaps = 20/168 (11%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L ++GV SVF+G DFITVTK D +W ++PE+F+ I
Sbjct: 112 PRSTIAPP-----YPSPLAAQLMNVDGVISVFYGTDFITVTKAPD-ANWAHIRPEVFSLI 165
Query: 94 MDFFSSGLPVLT----------DAQPSS---DTV-IHEDDDETVQMIKELLDTRIRPTVQ 139
+ +SG ++ DAQ +S D++ +E+D E V MIKELL+TRIRP +Q
Sbjct: 166 TEAITSGQKIVNVVEREAGAAPDAQETSGEQDSLSYNENDSEVVGMIKELLETRIRPAIQ 225
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
EDGGDI++ F+ G V LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 226 EDGGDIEYRGFEDGNVLLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 273
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TRIRP +QEDGGDI++ F+DG
Sbjct: 211 MIKELLETRIRPAIQEDGGDIEYRGFEDG 239
>gi|197106919|ref|YP_002132296.1| thioredoxin-like protein [Phenylobacterium zucineum HLK1]
gi|196480339|gb|ACG79867.1| thioredoxin-like protein [Phenylobacterium zucineum HLK1]
Length = 191
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/161 (49%), Positives = 101/161 (62%), Gaps = 11/161 (6%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + + A SPL +F IEGV VFFG DF+TV K DW LK + A IMD
Sbjct: 27 TRDFGSMEEAQASPLAADIFDIEGVTRVFFGPDFLTVGKHPS-FDWPHLKAPVLAAIMDH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHED---DDETVQM---IKELLDTRIRPTVQEDGGDIQFISF 150
F+SG P+ +A + H++ + ET Q+ IK+LLDTRIRP V +DGGDI F F
Sbjct: 86 FTSGRPLFAEAGEQAGG--HDEGAYEGETAQIVAEIKDLLDTRIRPAVAQDGGDILFHKF 143
Query: 151 Q--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+ GVV L M+G+C+ CPSS TLK GV+NML+ Y+PE T
Sbjct: 144 EPDTGVVWLNMRGACSGCPSSTATLKAGVENMLKHYVPEVT 184
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQ 27
IK+LLDTRIRP V +DGGDI F F+
Sbjct: 119 IKDLLDTRIRPAVAQDGGDILFHKFE 144
>gi|424909285|ref|ZP_18332662.1| thioredoxin-like protein [Rhizobium leguminosarum bv. viciae USDA
2370]
gi|392845316|gb|EJA97838.1| thioredoxin-like protein [Rhizobium leguminosarum bv. viciae USDA
2370]
Length = 187
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/156 (46%), Positives = 97/156 (62%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F A SPL + LF I GV V+FG DFITVTK D +W+ LKP I IM+
Sbjct: 27 TVEFLNPSQAQASPLAERLFLIPGVTGVYFGFDFITVTK--DGAEWQHLKPAILGAIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDET-----VQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
F SG P++ A + + + E V IKELL+TR+RP V +DGGDI F F+
Sbjct: 85 FMSGRPIMGTAIAAEVSDEEGEFFEEGDETIVATIKELLETRVRPAVAQDGGDITFRGFR 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L M+G+C+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 145 DGTVFLNMKGACSGCPSSTATLKHGVQNLLRHFVPE 180
Score = 45.8 bits (107), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F F+DG +
Sbjct: 119 IKELLETRVRPAVAQDGGDITFRGFRDGTV 148
>gi|39933530|ref|NP_945806.1| NifU-like domain-containing protein [Rhodopseudomonas palustris
CGA009]
gi|39647376|emb|CAE25897.1| possible NifU-like domain (residues 119-187) [Rhodopseudomonas
palustris CGA009]
Length = 188
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 97/153 (63%), Gaps = 7/153 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F A SPL LF I+GV VF+G DF+TVTK D +W+ LKP I IM+
Sbjct: 27 TLEFTDASQAARSPLAARLFDIDGVSGVFYGTDFVTVTK--DKGEWQHLKPAILGAIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTV-----IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
+ SG P+L D + + + D ETV++IK+L++TR+RP V DGGDI F F+
Sbjct: 85 YMSGTPILADGKSDGEDGDDDEFYADADAETVEIIKDLIETRVRPAVANDGGDITFRGFK 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFY 184
G+V L M+G+C CPSS TL++G+QN+L+ +
Sbjct: 145 DGIVYLNMRGACAGCPSSTATLQHGIQNLLKHF 177
Score = 43.9 bits (102), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+L++TR+RP V DGGDI F F+DG++
Sbjct: 118 IIKDLIETRVRPAVANDGGDITFRGFKDGIV 148
>gi|323138525|ref|ZP_08073593.1| Scaffold protein Nfu/NifU [Methylocystis sp. ATCC 49242]
gi|322396159|gb|EFX98692.1| Scaffold protein Nfu/NifU [Methylocystis sp. ATCC 49242]
Length = 187
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 93/137 (67%), Gaps = 11/137 (8%)
Query: 58 IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHE 117
I+GV++V +G DF++VTK D DW LKP I TIM+ F+SG P+LT+ + HE
Sbjct: 48 IDGVQAVMYGSDFVSVTK--DGADWAHLKPAILGTIMEHFASGAPLLTEGAAGAQQ--HE 103
Query: 118 D-------DDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSV 170
D D ETV IKEL++TR+RP V DGGDI F F+ GVV L M+G+C+ CPSS
Sbjct: 104 DGEFYDPSDAETVATIKELIETRVRPAVAGDGGDIVFRGFRDGVVYLTMKGACSGCPSST 163
Query: 171 VTLKNGVQNMLQFYIPE 187
TL+NG++N+L+ ++P+
Sbjct: 164 ATLRNGIENLLRHFLPQ 180
Score = 44.3 bits (103), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++TR+RP V DGGDI F F+DGV+
Sbjct: 119 IKELIETRVRPAVAGDGGDIVFRGFRDGVV 148
>gi|240850980|ref|YP_002972380.1| nitrogen fixation protein [Bartonella grahamii as4aup]
gi|240268103|gb|ACS51691.1| nitrogen fixation protein [Bartonella grahamii as4aup]
Length = 192
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 94/151 (62%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I + VF G+DFITV+K++ + W+ LKP I TIM+ F S PV
Sbjct: 35 EAAKNSPLAAKLFNIPNINGVFLGYDFITVSKKEGE--WQHLKPVILGTIMEHFLSNEPV 92
Query: 104 LT-------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+T ++ E D + V IKELL+TRIRP V DGGDI F F+ G+V
Sbjct: 93 ITTNATIQAQTHALNEEFYDEKDADIVLTIKELLETRIRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 153 LNMRGACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TRIRP V DGGDI F F++G++
Sbjct: 122 IKELLETRIRPAVANDGGDITFRGFENGIV 151
>gi|192288888|ref|YP_001989493.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris TIE-1]
gi|192282637|gb|ACE99017.1| Scaffold protein Nfu/NifU [Rhodopseudomonas palustris TIE-1]
Length = 188
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 97/153 (63%), Gaps = 7/153 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T++F A SPL LF I+GV VF+G DF+TVTK D +W+ LKP I IM+
Sbjct: 27 TLEFTDASQAARSPLAARLFDIDGVSGVFYGTDFVTVTK--DKGEWQHLKPAILGAIMEH 84
Query: 97 FSSGLPVLTDAQPSSDTV-----IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
+ SG P+L D + + + D ETV++IK+L++TR+RP V DGGDI F F+
Sbjct: 85 YMSGTPILADGKSDGEDGDDDEFYADADAETVEIIKDLIETRVRPAVANDGGDITFRGFK 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFY 184
G+V L M+G+C CPSS TL++G+QN+L+ +
Sbjct: 145 DGIVYLNMRGACAGCPSSTATLQHGIQNLLKHF 177
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+IK+L++TR+RP V DGGDI F F+DG++
Sbjct: 118 IIKDLIETRVRPAVANDGGDITFRGFKDGIV 148
>gi|302500846|ref|XP_003012416.1| hypothetical protein ARB_01375 [Arthroderma benhamiae CBS 112371]
gi|291175974|gb|EFE31776.1| hypothetical protein ARB_01375 [Arthroderma benhamiae CBS 112371]
Length = 264
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 98/158 (62%), Gaps = 13/158 (8%)
Query: 42 TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGL 101
T Q Y SPL L ++G SVFFG DFITVTK D D +W +KPEIF+ I + + G
Sbjct: 71 TLQPPYPSPLAAKLLNVDGAVSVFFGSDFITVTK-DSDANWAHIKPEIFSLITEAITRGE 129
Query: 102 PVLT------------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
++ A +E+D+E V MI+ELL+TRIRP +QEDGGDI+F
Sbjct: 130 ALVNVVDVRQGKEGAEGAGAEEAVRYNEEDEEVVGMIQELLETRIRPAIQEDGGDIEFRG 189
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 190 FENGNVLLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 227
Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI+ELL+TRIRP +QEDGGDI+F F++G
Sbjct: 165 MIQELLETRIRPAIQEDGGDIEFRGFENG 193
>gi|395790562|ref|ZP_10470023.1| hypothetical protein MEC_00014 [Bartonella alsatica IBS 382]
gi|395409624|gb|EJF76211.1| hypothetical protein MEC_00014 [Bartonella alsatica IBS 382]
Length = 192
Score = 139 bits (351), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 73/151 (48%), Positives = 97/151 (64%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL L I V VF G+DFITV+K++ + W+ LKP I TIM+ F SG PV
Sbjct: 35 EAAKNSPLAAKLLNIPNVNGVFLGYDFITVSKKEGE--WQHLKPIILGTIMEHFLSGDPV 92
Query: 104 L-TDAQPSSDT------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+ T+A + T E D + V IKELL+TRIRP V DGGDI F F+ G+V
Sbjct: 93 IITNATSQAQTDDLNEEFYDEKDADIVLTIKELLETRIRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C+ CPSS TLK+G++N+L+ +IPE
Sbjct: 153 LNMRGACSGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TRIRP V DGGDI F F++G++
Sbjct: 122 IKELLETRIRPAVANDGGDITFRGFENGIV 151
>gi|148260770|ref|YP_001234897.1| NifU domain-containing protein [Acidiphilium cryptum JF-5]
gi|338984105|ref|ZP_08633212.1| NifU domain-containing protein [Acidiphilium sp. PM]
gi|146402451|gb|ABQ30978.1| nitrogen-fixing NifU domain protein [Acidiphilium cryptum JF-5]
gi|338206968|gb|EGO94998.1| NifU domain-containing protein [Acidiphilium sp. PM]
Length = 185
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 86/134 (64%), Gaps = 1/134 (0%)
Query: 55 LFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTV 114
LF + GV VF G DF++VT+ DD +W LKP++ IM+ + SG PV+ AQ D
Sbjct: 45 LFALPGVVRVFLGADFVSVTR-DDGTEWTSLKPQVLGAIMEHYLSGRPVMAGAQAEVDED 103
Query: 115 IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLK 174
+ D E IKELLD R+RP V DGGDI F F+ G+V L MQG+C+ CPSS TLK
Sbjct: 104 VDPADREIADQIKELLDMRVRPAVAGDGGDIVFRGFRDGIVSLHMQGACSGCPSSTATLK 163
Query: 175 NGVQNMLQFYIPET 188
G++N+L+ Y+PE
Sbjct: 164 MGIENLLKHYVPEV 177
Score = 43.9 bits (102), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD R+RP V DGGDI F F+DG++
Sbjct: 115 IKELLDMRVRPAVAGDGGDIVFRGFRDGIV 144
>gi|238650984|ref|YP_002916840.1| hypothetical protein RPR_06295 [Rickettsia peacockii str. Rustic]
gi|238625082|gb|ACR47788.1| hypothetical protein RPR_06295 [Rickettsia peacockii str. Rustic]
Length = 190
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 96/138 (69%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SGLPV +
Sbjct: 40 SKLAESLFYINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGLPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|357032014|ref|ZP_09093954.1| NifU protein [Gluconobacter morbifer G707]
gi|356414241|gb|EHH67888.1| NifU protein [Gluconobacter morbifer G707]
Length = 195
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 36 QTIDFPTGQAAYC-SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+ +DF +A S L + LF +E V+ VF G DF+++TK D + W LKP + T+
Sbjct: 35 RPVDFGDANSASGRSELAETLFGLEDVRRVFLGSDFVSITKSDG-ISWGDLKPVVLGTLT 93
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
FF +G PVL+ D + +D E V I +LLDTR+RP V DGGDI F ++ GV
Sbjct: 94 TFFENGRPVLSGDAEVLDHDVAAEDREVVSRILDLLDTRVRPAVAGDGGDIAFRGYKEGV 153
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 154 VYLAMQGACSGCPSSRATLKHGVENMLRHYVPE 186
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I +LLDTR+RP V DGGDI F +++GV+
Sbjct: 125 ILDLLDTRVRPAVAGDGGDIAFRGYKEGVV 154
>gi|302927119|ref|XP_003054431.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735372|gb|EEU48718.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 309
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 114/197 (57%), Gaps = 26/197 (13%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGV 61
+K L + R+ P +G FI + + P TI P + SPL L I+GV
Sbjct: 89 LKFLPNHRVVP----EGISTPFIEYLN-----PRATISPP-----HPSPLAAKLMNIDGV 134
Query: 62 KSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ-------PSSDT- 113
SVF+G DFITVTK D +W ++PEIFA I + +SG ++ A+ P ++
Sbjct: 135 TSVFYGADFITVTKAAD-ANWAHIRPEIFALITEAITSGETLVNVAERREGETHPEAEED 193
Query: 114 --VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG-GVVKLKMQGSCTSCPSSV 170
+EDD E V MIKELL+TRIRP +QEDGGDI F F G V L+++G+C +C SS
Sbjct: 194 SLAYNEDDSEVVGMIKELLETRIRPAIQEDGGDIDFRGFDDEGYVHLRLRGACRTCDSST 253
Query: 171 VTLKNGVQNMLQFYIPE 187
VTLKNG++ ML YI E
Sbjct: 254 VTLKNGIEGMLMHYIEE 270
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP +QEDGGDI F F D
Sbjct: 207 MIKELLETRIRPAIQEDGGDIDFRGFDD 234
>gi|163757734|ref|ZP_02164823.1| hypothetical protein HPDFL43_20027 [Hoeflea phototrophica DFL-43]
gi|162285236|gb|EDQ35518.1| hypothetical protein HPDFL43_20027 [Hoeflea phototrophica DFL-43]
Length = 187
Score = 139 bits (350), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/148 (47%), Positives = 92/148 (62%), Gaps = 6/148 (4%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A S L LF I GV VF+G+DFIT+TK DD DW+ LKP I TIM+ F SG PV
Sbjct: 35 EAGATSQLAGKLFGIPGVIGVFYGYDFITITK--DDADWQHLKPAILGTIMEHFMSGAPV 92
Query: 104 LTDAQPSSDTVIH----EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
++ D+ V IKELL++R+RP V +DGGDI F F+ G V L M
Sbjct: 93 MSGPVGEVPEGEEEFFESGDETIVATIKELLESRVRPAVAQDGGDITFRGFRDGKVFLHM 152
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+G+C CPSS TLK+G+QN+L+ ++PE
Sbjct: 153 KGACAGCPSSTATLKHGIQNLLRHFVPE 180
Score = 44.3 bits (103), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG--VLEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELL++R+RP V +DGGDI F F+DG L G P+ A + LL
Sbjct: 119 IKELLESRVRPAVAQDGGDITFRGFRDGKVFLHMKGACAGCPSSTATLKHGIQNLL 174
>gi|119189821|ref|XP_001245517.1| hypothetical protein CIMG_04958 [Coccidioides immitis RS]
gi|392868417|gb|EAS34199.2| HIRA-interacting protein 5 [Coccidioides immitis RS]
Length = 325
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 99/155 (63%), Gaps = 13/155 (8%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSG---- 100
A + SPL L ++GV SVF+G DFIT+TK D +W +KPE+F+ I + +SG
Sbjct: 123 APHPSPLAAKLLNVDGVSSVFYGPDFITITKAGD-ANWAHIKPEVFSLITEAVTSGEQLV 181
Query: 101 --LPVLTDAQPSSD------TVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
+ V AQ + +E+D+E V MI ELL+TRIRP +QEDGGDI+F F+
Sbjct: 182 NTVAVAEGAQAGQEGSGEEAVEYNEEDEEVVGMINELLETRIRPAIQEDGGDIEFRGFKD 241
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 242 GNVMLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 276
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI ELL+TRIRP +QEDGGDI+F F+DG
Sbjct: 214 MINELLETRIRPAIQEDGGDIEFRGFKDG 242
>gi|103487552|ref|YP_617113.1| nitrogen-fixing NifU-like protein [Sphingopyxis alaskensis RB2256]
gi|98977629|gb|ABF53780.1| nitrogen-fixing NifU-like protein [Sphingopyxis alaskensis RB2256]
Length = 190
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 100/169 (59%), Gaps = 14/169 (8%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PG+T+ DF + + A SPL LF + V VFFG DF++VT +W +KP
Sbjct: 18 PGRTVMETGTRDFASAEEAEASPLASALFSLGDVTGVFFGRDFVSVTIAPG-AEWADVKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQ-----PSSDTVIHED--DDETVQMIKELLDTRIRPTVQE 140
++ +MD F +G+P+ A P D +D D + ++ IKEL++TR+RP V
Sbjct: 77 DVLGIVMDHFLAGVPLFNAASAGSAVPPEDAGFADDPADADIIEQIKELIETRVRPAVAN 136
Query: 141 DGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
DGGDI + F G V LKMQG+C CPSS TLKNG++++L+ Y+PE T
Sbjct: 137 DGGDIVYRGFDKGNVYLKMQGACAGCPSSTATLKNGIESLLKHYVPEVT 185
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKEL++TR+RP V DGGDI + F G
Sbjct: 122 IKELIETRVRPAVANDGGDIVYRGFDKG 149
>gi|336272067|ref|XP_003350791.1| hypothetical protein SMAC_02461 [Sordaria macrospora k-hell]
gi|380094954|emb|CCC07456.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 290
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/164 (46%), Positives = 104/164 (63%), Gaps = 14/164 (8%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
QT + P + P KL+ I+GV SVF+G DFITVTK D +W ++PE+FA I +
Sbjct: 81 QTENTPNPDSLKFLPNTKLM-NIDGVTSVFYGTDFITVTK-SADANWAHIRPEVFALITE 138
Query: 96 FFSSGLPVL-----------TDAQPSSDTVIH-EDDDETVQMIKELLDTRIRPTVQEDGG 143
+SG ++ T D++ + E+D E V MIKELL+TRIRP +QEDGG
Sbjct: 139 TITSGQTIVNVVERREGEENTQESDEKDSLAYDENDSEVVGMIKELLETRIRPAIQEDGG 198
Query: 144 DIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI+F F+ G+VKLK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 199 DIEFRGFEDGIVKLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 242
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRP +QEDGGDI+F F+DG+++
Sbjct: 180 MIKELLETRIRPAIQEDGGDIEFRGFEDGIVK 211
>gi|374319615|ref|YP_005066114.1| NifU-like protein [Rickettsia slovaca 13-B]
gi|383751658|ref|YP_005426759.1| NifU-like protein [Rickettsia slovaca str. D-CWPP]
gi|360042164|gb|AEV92546.1| NifU-like protein [Rickettsia slovaca 13-B]
gi|379774672|gb|AFD20028.1| NifU-like protein [Rickettsia slovaca str. D-CWPP]
Length = 190
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 95/138 (68%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + DW+++KPEI IMD F SG PV +
Sbjct: 40 SKLAESLFYINNVKSVFFGSDFITVTKQAEG-DWQVIKPEILMVIMDHFVSGFPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
Score = 39.3 bits (90), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|429851681|gb|ELA26859.1| NifU-like protein [Colletotrichum gloeosporioides Nara gc5]
Length = 312
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 102/166 (61%), Gaps = 18/166 (10%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L I+GV SVF+G DFITVTK D +W ++PEIFA I
Sbjct: 117 PRSTIAPP-----YPSPLAAQLMNIDGVTSVFYGADFITVTKAAD-ANWAHIRPEIFALI 170
Query: 94 MDFFSSGLPVLTDAQPS----------SDTVIH-EDDDETVQMIKELLDTRIRPTVQEDG 142
+ +SG ++ A+ D++ + E+D E V MIKELL+TRIRP +QEDG
Sbjct: 171 TEAITSGQTIVNVAEKKDGAAAPEAEEEDSLAYDENDSEVVGMIKELLETRIRPAIQEDG 230
Query: 143 GDIQFISFQG-GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GDI F F GVV LK++G+C +C SS TLKNG+++ML YI E
Sbjct: 231 GDIDFRGFTDEGVVLLKLRGACRTCDSSTATLKNGIESMLMHYIEE 276
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP +QEDGGDI F F D
Sbjct: 213 MIKELLETRIRPAIQEDGGDIDFRGFTD 240
>gi|94498004|ref|ZP_01304568.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. SKA58]
gi|94422587|gb|EAT07624.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. SKA58]
Length = 194
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 97/161 (60%), Gaps = 9/161 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + + A SPL LF + V VFFG DFI+VT + DW+ +KPE+ + +++
Sbjct: 30 TRDFASPEEAEASPLASALFTLGDVTGVFFGGDFISVTIGEGS-DWRDVKPEVLSILLEH 88
Query: 97 FSSGLPVLTDAQ------PSSDTVIHED--DDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
FS+ +P+ P+ D E+ D E V I+EL+DTR+RP V DGGDI +
Sbjct: 89 FSANMPLFVAGSAGEIHVPADDDAFAENPEDAEIVDQIRELIDTRVRPAVANDGGDIIYR 148
Query: 149 SFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F G V LKMQG+C CPSS TLKNG++ +L+ Y+PE T
Sbjct: 149 GFDKGTVYLKMQGACAGCPSSSATLKNGIEQLLKHYVPEVT 189
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
I+EL+DTR+RP V DGGDI + F G L+ G P+ A + + +LL
Sbjct: 126 IRELIDTRVRPAVANDGGDIIYRGFDKGTVYLKMQGACAGCPSSSATLKNGIEQLL 181
>gi|49474596|ref|YP_032638.1| hypothetical protein BQ10720 [Bartonella quintana str. Toulouse]
gi|49240100|emb|CAF26539.1| hypothetical protein BQ10720 [Bartonella quintana str. Toulouse]
Length = 192
Score = 139 bits (349), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/151 (47%), Positives = 94/151 (62%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I V V G+DFITV+K+D + W+ LKP I TIM+ F S PV
Sbjct: 35 EAAKNSPLAAKLFNIPNVNGVLLGYDFITVSKKDGE--WQHLKPAILGTIMEHFLSDAPV 92
Query: 104 L-TDAQPSSDT------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+ T+A + T E D + V IKELL+TR+RP V DGGDI F F+ G+V
Sbjct: 93 IKTNATIQAQTHALNEEFYDEKDVDIVSTIKELLETRVRPAVANDGGDITFCGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLK G++N+L+ +IPE
Sbjct: 153 LNMRGACAGCPSSTATLKTGIENLLRHFIPE 183
Score = 46.2 bits (108), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELL+TR+RP V DGGDI F F++G+ L G P+ A + + LL
Sbjct: 122 IKELLETRVRPAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATLKTGIENLL 177
>gi|407420833|gb|EKF38692.1| hypothetical protein MOQ_001104 [Trypanosoma cruzi marinkellei]
Length = 280
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 112/175 (64%), Gaps = 8/175 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F S + L+ PG ++DFP AY SPL ++LF I+GV++V+ ++ITV ++ +
Sbjct: 75 LRFYSMELSFLK-PGFSMDFPNAGHAYKSPLAEILFSIDGVEAVYIADEYITV-RKGHFL 132
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTD------AQPSSDTVIHEDDDETVQMIKELLDTRI 134
DW L P I +I +F S + +L++ + + DT ++DDDE + IKELL TRI
Sbjct: 133 DWDALLPMIKESIAEFAESKVKILSEEGEELLSGHNEDTEPNDDDDEVILAIKELLATRI 192
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
RP +Q DGG+++++ G V + ++G+C SCPS+ VTLKNG++ ML +IPE
Sbjct: 193 RPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLMHWIPEVV 247
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL TRIRP +Q DGG+++++ DG +
Sbjct: 184 IKELLATRIRPMLQADGGNVRYLDMDDGTV 213
>gi|444723415|gb|ELW64072.1| NFU1 iron-sulfur cluster scaffold like protein, mitochondrial
[Tupaia chinensis]
Length = 174
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 84/100 (84%), Gaps = 1/100 (1%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 47 RTMDFPTAAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 106
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIR 135
FF+SGLP++T+ + SS E+DDE V MIKELLDTRIR
Sbjct: 107 FFASGLPLVTE-ETSSGEAGSEEDDEVVAMIKELLDTRIR 145
>gi|386399266|ref|ZP_10084044.1| thioredoxin-like protein [Bradyrhizobium sp. WSM1253]
gi|385739892|gb|EIG60088.1| thioredoxin-like protein [Bradyrhizobium sp. WSM1253]
Length = 189
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 105/160 (65%), Gaps = 9/160 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G ++F ++A SPL + LF + GV VF+G DFITVTK + + W+ LKP I IM
Sbjct: 25 GGPMEFDNRESAARSPLAEKLFEVPGVTGVFYGSDFITVTKANGE--WQQLKPAILGAIM 82
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDE-------TVQMIKELLDTRIRPTVQEDGGDIQF 147
+ + SG P+L D +SD+ + ++D+ TV MIK+L++TR+RP V DGGDI F
Sbjct: 83 EHYMSGAPLLADGAAASDSDLDDEDEFFDEADAETVDMIKDLIETRVRPAVANDGGDITF 142
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V L M+GSC CPSS TL++G+QN+L+ ++P+
Sbjct: 143 RGFKDGIVYLNMKGSCAGCPSSTATLQHGIQNLLKHFVPD 182
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L++TR+RP V DGGDI F F+DG++
Sbjct: 120 MIKDLIETRVRPAVANDGGDITFRGFKDGIV 150
>gi|413948797|gb|AFW81446.1| hypothetical protein ZEAMMB73_536097 [Zea mays]
Length = 213
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/114 (60%), Positives = 81/114 (71%), Gaps = 3/114 (2%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DFP + A SPL K LF I+GV VFFG DF+TVTK ++ W LKPE+FA IMDF+S
Sbjct: 99 DFPNARTAMTSPLAKSLFAIDGVTRVFFGSDFVTVTKSEE-TSWDCLKPEVFAAIMDFYS 157
Query: 99 SGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
SG P+ D A S DT IHEDD E V MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 158 SGQPLFLDSNAAASMDTAIHEDDSEIVAMIKELLETRIRPAVQDDGGDIEYRGF 211
Score = 45.1 bits (105), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELL+TRIRP VQ+DGGDI++ F
Sbjct: 186 MIKELLETRIRPAVQDDGGDIEYRGF 211
>gi|157964815|ref|YP_001499639.1| NifU-like protein [Rickettsia massiliae MTU5]
gi|157844591|gb|ABV85092.1| NifU-like protein [Rickettsia massiliae MTU5]
Length = 191
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 95/138 (68%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SG PV +
Sbjct: 41 SKLAESLFHINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGFPVF-EEN 98
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 99 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 158
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 159 PSSTITLKNGIESMLKHF 176
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 118 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 148
>gi|310877201|gb|ADP36961.1| hypothetical protein [Asterochloris sp. DA2]
Length = 141
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 82/110 (74%), Gaps = 4/110 (3%)
Query: 82 WKLLKPEIFATIMDFFSSGLPVLTDAQP--SSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
W +LKP++F IMD F+SG P+L D +SDT I EDD + V MIKELL+TRIRP V
Sbjct: 3 WSVLKPDVFXAIMDHFTSGDPLLLDDDEYGASDTAIQEDDSDVVAMIKELLETRIRPAVM 62
Query: 140 EDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
EDGGDI F F G+VKLKMQG+C+ CPSS VTLK+G++NML+ YIPE
Sbjct: 63 EDGGDIVFQGFDENSGIVKLKMQGACSGCPSSAVTLKSGIENMLKHYIPE 112
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/28 (71%), Positives = 22/28 (78%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP V EDGGDI F F +
Sbjct: 48 MIKELLETRIRPAVMEDGGDIVFQGFDE 75
>gi|379713537|ref|YP_005301875.1| NifU-like protein [Rickettsia massiliae str. AZT80]
gi|376334183|gb|AFB31415.1| NifU-like protein [Rickettsia massiliae str. AZT80]
Length = 190
Score = 138 bits (348), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 95/138 (68%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SG PV +
Sbjct: 40 SKLAESLFHINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGFPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|383481907|ref|YP_005390822.1| NifU-like protein [Rickettsia rhipicephali str. 3-7-female6-CWPP]
gi|378934246|gb|AFC72749.1| NifU-like protein [Rickettsia rhipicephali str. 3-7-female6-CWPP]
Length = 190
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 95/138 (68%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SG PV +
Sbjct: 40 SKLAESLFHINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGFPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
Score = 39.7 bits (91), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|350273795|ref|YP_004885108.1| nifU-like protein [Rickettsia japonica YH]
gi|348593008|dbj|BAK96969.1| nifU-like domain [Rickettsia japonica YH]
Length = 190
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 94/138 (68%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SG PV +
Sbjct: 40 SKLAASLFHINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGFPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|347757698|ref|YP_004865260.1| nifU-like domain-containing protein [Micavibrio aeruginosavorus
ARL-13]
gi|347590216|gb|AEP09258.1| nifU-like domain protein [Micavibrio aeruginosavorus ARL-13]
Length = 189
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 96/157 (61%), Gaps = 4/157 (2%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P T DF + A S L + LF+IEGV VF G DFI+VTK D +W LK I A I
Sbjct: 24 PSGTADFGSVGEAGASQLAQRLFKIEGVTRVFLGPDFISVTK-DAGEEWDFLKARILAAI 82
Query: 94 MDFFSSGLPVLTDAQPSSDTV---IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
M+ S G+P++ S + D+ + I+ELL+TR+RP VQ DGGDI F F
Sbjct: 83 MEHLSIGMPIIDPDYAVSKKASGGTSDLDNAIIAQIEELLETRVRPAVQSDGGDIVFDRF 142
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G+V L+M+G+C CPSS TLK G++NML+ Y+PE
Sbjct: 143 EDGIVFLRMRGACAGCPSSTATLKVGIENMLRHYVPE 179
Score = 45.1 bits (105), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+ELL+TR+RP VQ DGGDI F F+DG++
Sbjct: 118 IEELLETRVRPAVQSDGGDIVFDRFEDGIV 147
>gi|67458659|ref|YP_246283.1| NifU-like domain-containing protein [Rickettsia felis URRWXCal2]
gi|67004192|gb|AAY61118.1| NifU-like domain [Rickettsia felis URRWXCal2]
Length = 190
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 96/138 (69%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPE+ IMD F SG PV ++
Sbjct: 40 SKLAESLFYINNVKSVFFGSDFITVTKQAES-NWQVIKPEVLMVIMDHFVSGFPVFEEST 98
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 99 -KADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|341584205|ref|YP_004764696.1| NifU-like protein [Rickettsia heilongjiangensis 054]
gi|340808430|gb|AEK75018.1| NifU-like protein [Rickettsia heilongjiangensis 054]
Length = 190
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 94/138 (68%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SG PV +
Sbjct: 40 SKLAASLFHINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGFPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|395782376|ref|ZP_10462774.1| hypothetical protein MCY_01332 [Bartonella rattimassiliensis 15908]
gi|395418945|gb|EJF85260.1| hypothetical protein MCY_01332 [Bartonella rattimassiliensis 15908]
Length = 192
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 93/151 (61%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A SPL LF I V VF G+DFITV+K+ + W+ LKP I TIM+ F S PV
Sbjct: 35 KATKDSPLAAKLFNIPNVNGVFLGYDFITVSKKGGE--WQHLKPIILGTIMEHFLSNEPV 92
Query: 104 LT-------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+T A ++ E D + V IKELL+TRIRP V DGGDI F F+ G+V
Sbjct: 93 ITTNATTQAHAHALNEEFYDEKDTDIVLTIKELLETRIRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 153 LNMRGACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TRIRP V DGGDI F F++G++
Sbjct: 122 IKELLETRIRPAVANDGGDITFRGFENGIV 151
>gi|15892941|ref|NP_360655.1| hypothetical protein RC1018 [Rickettsia conorii str. Malish 7]
gi|15620134|gb|AAL03556.1| unknown [Rickettsia conorii str. Malish 7]
Length = 190
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 95/138 (68%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SG PV +
Sbjct: 40 SKLAESLFYINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGFPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|34581359|ref|ZP_00142839.1| hypothetical protein [Rickettsia sibirica 246]
gi|229587020|ref|YP_002845521.1| NifU-like protein [Rickettsia africae ESF-5]
gi|383484346|ref|YP_005393259.1| NifU-like protein [Rickettsia parkeri str. Portsmouth]
gi|28262744|gb|EAA26248.1| unknown [Rickettsia sibirica 246]
gi|228022070|gb|ACP53778.1| NifU-like protein [Rickettsia africae ESF-5]
gi|378936700|gb|AFC75200.1| NifU-like protein [Rickettsia parkeri str. Portsmouth]
Length = 190
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 95/138 (68%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SG PV +
Sbjct: 40 SKLAESLFYINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGFPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|383312972|ref|YP_005365773.1| hypothetical protein MCE_06650 [Candidatus Rickettsia amblyommii
str. GAT-30V]
gi|378931632|gb|AFC70141.1| hypothetical protein MCE_06650 [Candidatus Rickettsia amblyommii
str. GAT-30V]
Length = 190
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 95/138 (68%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SG PV +
Sbjct: 40 SKLAESLFHINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGFPVF-EKN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVDHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|327299030|ref|XP_003234208.1| NifU domain-containing protein [Trichophyton rubrum CBS 118892]
gi|326463102|gb|EGD88555.1| NifU domain-containing protein [Trichophyton rubrum CBS 118892]
Length = 288
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/156 (46%), Positives = 98/156 (62%), Gaps = 13/156 (8%)
Query: 42 TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGL 101
T Q Y SPL L ++G SVFFG DFITVTK D D +W +KPEIF+ I + + G
Sbjct: 111 TLQPPYPSPLAAKLLNVDGAVSVFFGSDFITVTK-DSDANWAHIKPEIFSLITEAITRGE 169
Query: 102 PVLT------------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
++ A+ +E+D+E V MI+ELL+TRIRP +QEDGGDI+F
Sbjct: 170 ALVNVVDVRQGKEGAEGAEAEEAVRYNEEDEEVVGMIQELLETRIRPAIQEDGGDIEFRG 229
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYI 185
F+ G V LK++G+C +C SS VTLKNG+++ML Y+
Sbjct: 230 FENGNVLLKLRGACRTCDSSTVTLKNGIESMLMHYV 265
Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI+ELL+TRIRP +QEDGGDI+F F++G
Sbjct: 205 MIQELLETRIRPAIQEDGGDIEFRGFENG 233
>gi|326403969|ref|YP_004284051.1| hypothetical protein ACMV_18220 [Acidiphilium multivorum AIU301]
gi|325050831|dbj|BAJ81169.1| hypothetical protein ACMV_18220 [Acidiphilium multivorum AIU301]
Length = 185
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 86/134 (64%), Gaps = 1/134 (0%)
Query: 55 LFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTV 114
LF + GV VF G DF++VT+ D+ +W LKP++ IM+ + SG PV+ AQ D
Sbjct: 45 LFALPGVVRVFLGADFVSVTR-DEGTEWTSLKPQVLGAIMEHYLSGRPVMAGAQAEVDED 103
Query: 115 IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLK 174
+ D E IKELLD R+RP V DGGDI F F+ G+V L MQG+C+ CPSS TLK
Sbjct: 104 VDPADREIADQIKELLDMRVRPAVAGDGGDIVFRGFRDGIVSLHMQGACSGCPSSTATLK 163
Query: 175 NGVQNMLQFYIPET 188
G++N+L+ Y+PE
Sbjct: 164 MGIENLLKHYVPEV 177
Score = 43.9 bits (102), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD R+RP V DGGDI F F+DG++
Sbjct: 115 IKELLDMRVRPAVAGDGGDIVFRGFRDGIV 144
>gi|383482530|ref|YP_005391444.1| NifU-like protein [Rickettsia montanensis str. OSU 85-930]
gi|378934884|gb|AFC73385.1| NifU-like protein [Rickettsia montanensis str. OSU 85-930]
Length = 190
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 94/138 (68%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ +W+++KPEI IMD F SG PV +
Sbjct: 40 SKLAESLFHINNVKSVFFGSDFITVTKQAKG-NWQVIKPEILMVIMDHFVSGFPVF-EEN 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 98 TKADNVNHNLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++GV++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGVVK 147
>gi|383641800|ref|ZP_09954206.1| Scaffold protein Nfu/NifU [Sphingomonas elodea ATCC 31461]
Length = 191
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 101/174 (58%), Gaps = 9/174 (5%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + T DF + + A SPL LF + V VFFG DFI+VT V+W
Sbjct: 14 LKFLPGRIVMEAGTRDFASPEEAEASPLATALFALGDVTGVFFGRDFISVTA-GPGVEWS 72
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHE--------DDDETVQMIKELLDTRIR 135
LKP++ ++D FS+ +P+ + +V E +D + V I+EL+DTRIR
Sbjct: 73 GLKPDVLGILLDHFSANMPLFLQGSAAGFSVPPESADFGDNPEDADIVAQIRELIDTRIR 132
Query: 136 PTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
P V DGGDI + F G V L+MQG+C+ CPSS TLKNG++ +L++Y+PE T
Sbjct: 133 PAVANDGGDIVYRGFNEGKVFLQMQGACSGCPSSTATLKNGIEQLLKYYVPEVT 186
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
I+EL+DTRIRP V DGGDI + F +G
Sbjct: 123 IRELIDTRIRPAVANDGGDIVYRGFNEG 150
>gi|310796741|gb|EFQ32202.1| hypothetical protein GLRG_07346 [Glomerella graminicola M1.001]
Length = 316
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 103/170 (60%), Gaps = 22/170 (12%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P Y SPL L I+GV SVF+G DFITV+K D +W ++PE+FA I
Sbjct: 116 PRSTIAPP-----YPSPLAAQLMNIDGVTSVFYGADFITVSKAAD-ANWAHIRPEVFALI 169
Query: 94 MDFFSSGLPVLTDAQPSS--------------DTVIH-EDDDETVQMIKELLDTRIRPTV 138
+ +SG ++ A+ D++ + E+D E V MIKELL+TRIRP +
Sbjct: 170 TEAITSGQSIVNVAEKKEGGVAGEEQQQHGEEDSLAYDENDSEVVGMIKELLETRIRPAI 229
Query: 139 QEDGGDIQFISFQ-GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
QEDGGDI+F F G+V LK++G+C +C SS VTLKNG++ ML YI E
Sbjct: 230 QEDGGDIEFRGFTDDGIVLLKLRGACRTCDSSTVTLKNGIEGMLMHYIEE 279
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP +QEDGGDI+F F D
Sbjct: 216 MIKELLETRIRPAIQEDGGDIEFRGFTD 243
>gi|393721255|ref|ZP_10341182.1| nitrogen-fixing NifU-like protein [Sphingomonas echinoides ATCC
14820]
Length = 190
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 96/160 (60%), Gaps = 8/160 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF T + A SPL + LF + V VFFG DF++VT DW LKP++ ++D
Sbjct: 27 TRDFVTPEEAEASPLAEALFGLGDVTGVFFGRDFVSVTAAPG-TDWSTLKPDVLGLLLDH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHED-------DDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
FS+ +P+ + +V ED D + V IK+L++TRIRP V DGGDI +
Sbjct: 86 FSADMPLFRPGTAGAISVPAEDSFTDDPEDADIVAQIKDLIETRIRPAVANDGGDIVYRG 145
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F+ G V L MQG+C CPSS TLKNG++ +L++Y+PE T
Sbjct: 146 FEKGKVYLAMQGACAGCPSSSATLKNGIEQLLRYYVPEVT 185
Score = 38.9 bits (89), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG--VLEEPGQTIDFPTGQAAYCSPLGKLL 55
IK+L++TRIRP V DGGDI + F+ G L G P+ A + + +LL
Sbjct: 122 IKDLIETRIRPAVANDGGDIVYRGFEKGKVYLAMQGACAGCPSSSATLKNGIEQLL 177
>gi|344303342|gb|EGW33616.1| hypothetical protein SPAPADRAFT_60951 [Spathaspora passalidarum
NRRL Y-27907]
Length = 243
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 121/193 (62%), Gaps = 9/193 (4%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEG 60
+ K L + PT + ++F+S + ++ +T +F + A SPL +F+I G
Sbjct: 15 ITKRFLSFKTLPTPNPNA--LKFVSPECSIIPIENKTFEFTSTLQAVHSPLALKIFKIPG 72
Query: 61 VKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGL-PVLTD---AQPSSDTVIH 116
V+SV G DF+TV KQD ++W L+PE+ + +F + PV+T Q + + +
Sbjct: 73 VRSVMLGPDFLTVNKQDH-INWANLRPEVVDLMDEFLTQKKDPVITKDLLEQINEEELSS 131
Query: 117 EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLK 174
E+D ETV MIKEL++TRIRP +Q+DGGDI++ +F + G V LK+QG+C SC SS TLK
Sbjct: 132 ENDTETVAMIKELIETRIRPAIQDDGGDIEYKAFDEETGTVFLKLQGACKSCSSSEDTLK 191
Query: 175 NGVQNMLQFYIPE 187
+G+++ML++YI E
Sbjct: 192 HGIESMLKYYIEE 204
>gi|303322791|ref|XP_003071387.1| NifU-like domain containing protein [Coccidioides posadasii C735
delta SOWgp]
gi|240111089|gb|EER29242.1| NifU-like domain containing protein [Coccidioides posadasii C735
delta SOWgp]
Length = 325
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 98/155 (63%), Gaps = 13/155 (8%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSG---- 100
A + SPL L ++GV SVF+G DFIT+TK D +W +KPE+F+ I + +SG
Sbjct: 123 APHPSPLAAKLLNVDGVSSVFYGPDFITITKAGD-ANWAHIKPEVFSLITEAVTSGEQLV 181
Query: 101 --LPVLTDAQPSSD------TVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
+ V A + +E+D+E V MI ELL+TRIRP +QEDGGDI+F F+
Sbjct: 182 NTVAVAEGAHAGQEGSGEEAVEYNEEDEEVVGMINELLETRIRPAIQEDGGDIEFRGFKD 241
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 242 GNVMLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 276
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI ELL+TRIRP +QEDGGDI+F F+DG
Sbjct: 214 MINELLETRIRPAIQEDGGDIEFRGFKDG 242
>gi|393724106|ref|ZP_10344033.1| Scaffold protein Nfu/NifU [Sphingomonas sp. PAMC 26605]
Length = 190
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/160 (43%), Positives = 93/160 (58%), Gaps = 8/160 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF T + A SPL LF + V VFFG DF++VT VDW LKP++ ++D
Sbjct: 27 TRDFVTPEEAEASPLADALFGLGDVTGVFFGRDFVSVTAAAG-VDWSALKPDVLGLLLDH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHED-------DDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
FS+ +P+ V ED D + V IK+L++TRIRP V DGGDI +
Sbjct: 86 FSANMPLFIPGNAGGIAVPAEDSFDDDPADADIVSQIKDLIETRIRPAVANDGGDIVYRG 145
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F G V L MQG+C CPSS TLKNG++ +L++Y+PE T
Sbjct: 146 FDKGKVFLAMQGACAGCPSSSATLKNGIEQLLKYYVPEVT 185
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG--VLEEPGQTIDFPTGQAAYCSPLGKLL 55
IK+L++TRIRP V DGGDI + F G L G P+ A + + +LL
Sbjct: 122 IKDLIETRIRPAVANDGGDIVYRGFDKGKVFLAMQGACAGCPSSSATLKNGIEQLL 177
>gi|320032859|gb|EFW14809.1| NifU family protein [Coccidioides posadasii str. Silveira]
Length = 325
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 98/155 (63%), Gaps = 13/155 (8%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSG---- 100
A + SPL L ++GV SVF+G DFIT+TK D +W +KPE+F+ I + +SG
Sbjct: 123 APHPSPLAAKLLNVDGVSSVFYGPDFITITKAGD-ANWAHIKPEVFSLITEAVTSGEQLV 181
Query: 101 --LPVLTDAQPSSD------TVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
+ V A + +E+D+E V MI ELL+TRIRP +QEDGGDI+F F+
Sbjct: 182 NTVAVAEGAHAGQEGSGEEAVEYNEEDEEVVGMINELLETRIRPAIQEDGGDIEFRGFKD 241
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 242 GNVMLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 276
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI ELL+TRIRP +QEDGGDI+F F+DG
Sbjct: 214 MINELLETRIRPAIQEDGGDIEFRGFKDG 242
>gi|453088196|gb|EMF16236.1| HIRA-interacting protein 5 [Mycosphaerella populorum SO2202]
Length = 309
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 97/151 (64%), Gaps = 11/151 (7%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
+ SPL + L ++GV SVF+G D+ITVTK D W +KPE+F+ I + +SG ++
Sbjct: 113 HPSPLAQQLMNVDGVSSVFYGRDYITVTK-DTSTPWAHVKPEVFSLITEAVTSGQQIVNT 171
Query: 106 -------DAQPSSDTVI--HEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
D Q S D + +D+E V MI+ELL+TRIRP +QEDGGDI F F G V
Sbjct: 172 VENKAGDDGQSSGDEAVTYAPEDEEVVGMIQELLETRIRPAIQEDGGDIDFRGFHDGQVL 231
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 232 LKLRGACRTCDSSTVTLKNGIESMLMHYIEE 262
Score = 49.3 bits (116), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 24/29 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI+ELL+TRIRP +QEDGGDI F F DG
Sbjct: 200 MIQELLETRIRPAIQEDGGDIDFRGFHDG 228
>gi|407853600|gb|EKG06508.1| hypothetical protein TCSYLVIO_002386 [Trypanosoma cruzi]
Length = 280
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 111/175 (63%), Gaps = 8/175 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F S + L+ PG ++DFP AY SPL ++LF I+GV++V+ ++ITV ++ V
Sbjct: 75 LRFYSMELSFLK-PGFSMDFPNAGHAYKSPLAEILFSIDGVEAVYIADEYITV-RKGHLV 132
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTD------AQPSSDTVIHEDDDETVQMIKELLDTRI 134
DW + P I +I +F S + +L++ + + DT +DDDE + +KELL TRI
Sbjct: 133 DWDAILPMIKESIAEFAESKVNILSEEGEELLSGHNEDTEPKDDDDEVILAVKELLATRI 192
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
RP +Q DGG+++++ G V + ++G+C SCPS+ VTLKNG++ ML +IPE
Sbjct: 193 RPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLMHWIPEVV 247
Score = 40.4 bits (93), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL TRIRP +Q DGG+++++ DG +
Sbjct: 184 VKELLATRIRPMLQADGGNVRYLDMDDGTV 213
>gi|452987593|gb|EME87348.1| hypothetical protein MYCFIDRAFT_148025 [Pseudocercospora fijiensis
CIRAD86]
Length = 321
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 97/148 (65%), Gaps = 10/148 (6%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT--- 105
SPL L ++GV VF+G D+ITVTK D W +KPE+F+ I + ++G P++
Sbjct: 131 SPLASSLMNVDGVTGVFYGRDYITVTK-DSSTPWVHVKPEVFSLITEAVTNGQPIVNVVE 189
Query: 106 -----DAQPSSDTVIHE-DDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
+ Q S + ++ +D+E V MI+ELL+TRIRP +QEDGGDI+F F G V LK+
Sbjct: 190 GKTGEEGQSSGEAATYDPEDEEVVGMIQELLETRIRPAIQEDGGDIEFRGFHDGQVMLKL 249
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+G+C +C SS VTLKNG+++ML YI E
Sbjct: 250 RGACRTCDSSTVTLKNGIESMLMHYIEE 277
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI+ELL+TRIRP +QEDGGDI+F F DG
Sbjct: 215 MIQELLETRIRPAIQEDGGDIEFRGFHDG 243
>gi|56417173|ref|YP_154247.1| hypothetical protein AM1146 [Anaplasma marginale str. St. Maries]
gi|222475537|ref|YP_002563954.1| hypothetical protein AMF_868 [Anaplasma marginale str. Florida]
gi|56388405|gb|AAV86992.1| hypothetical protein AM1146 [Anaplasma marginale str. St. Maries]
gi|222419675|gb|ACM49698.1| Conserved hypothetical protein [Anaplasma marginale str. Florida]
Length = 194
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 99/164 (60%), Gaps = 16/164 (9%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G I+F A S L +LLF I+GV VFFG DF++VTK D DW L+PEI +
Sbjct: 31 GSGIEFSDATTAQGSTLARLLFEIQGVSKVFFGGDFVSVTKLPD-ADWDTLRPEILVVMT 89
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDE----------TVQMIKELLDTRIRPTVQEDGGD 144
D+FS +DA P + HE+ DE VQ +KEL++ +RP V +DGGD
Sbjct: 90 DYFSLH-NAYSDAAPQA----HEESDEREFFDTKDSEVVQRVKELIEHYVRPAVAQDGGD 144
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
I+F ++ GVV + ++G+C+ CPS+ VTLK+GV ML +Y+PE
Sbjct: 145 IKFRGYKEGVVFVHLRGACSGCPSAAVTLKDGVYGMLSYYVPEV 188
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KEL++ +RP V +DGGDI+F +++GV+
Sbjct: 126 VKELIEHYVRPAVAQDGGDIKFRGYKEGVV 155
>gi|254995338|ref|ZP_05277528.1| hypothetical protein AmarM_05319 [Anaplasma marginale str.
Mississippi]
gi|255003523|ref|ZP_05278487.1| hypothetical protein AmarPR_04754 [Anaplasma marginale str. Puerto
Rico]
gi|255004646|ref|ZP_05279447.1| hypothetical protein AmarV_05119 [Anaplasma marginale str.
Virginia]
Length = 189
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 99/163 (60%), Gaps = 16/163 (9%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G I+F A S L +LLF I+GV VFFG DF++VTK D DW L+PEI +
Sbjct: 26 GSGIEFSDATTAQGSTLARLLFEIQGVSKVFFGGDFVSVTKLPD-ADWDTLRPEILVVMT 84
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDE----------TVQMIKELLDTRIRPTVQEDGGD 144
D+FS +DA P + HE+ DE VQ +KEL++ +RP V +DGGD
Sbjct: 85 DYFSLH-NAYSDAAPQA----HEESDEREFFDTKDSEVVQRVKELIEHYVRPAVAQDGGD 139
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
I+F ++ GVV + ++G+C+ CPS+ VTLK+GV ML +Y+PE
Sbjct: 140 IKFRGYKEGVVFVHLRGACSGCPSAAVTLKDGVYGMLSYYVPE 182
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KEL++ +RP V +DGGDI+F +++GV+
Sbjct: 121 VKELIEHYVRPAVAQDGGDIKFRGYKEGVV 150
>gi|402771464|ref|YP_006591001.1| Scaffold protein Nfu/NifU [Methylocystis sp. SC2]
gi|401773484|emb|CCJ06350.1| Scaffold protein Nfu/NifU [Methylocystis sp. SC2]
Length = 185
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/133 (49%), Positives = 93/133 (69%), Gaps = 5/133 (3%)
Query: 58 IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD-AQP--SSDTV 114
IEGV++V +G DF++VTK + +W LKP I TIM+ F+SG P+LT+ A P SS
Sbjct: 48 IEGVEAVMYGADFVSVTK--NGAEWPHLKPAILGTIMEHFASGAPLLTEGAAPAQSSGEF 105
Query: 115 IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLK 174
D ETV IKEL++TR+RP V DGGDI F F+ GVV L M+G+C+ CPSS TL+
Sbjct: 106 YDSADAETVATIKELIETRVRPAVAGDGGDIVFRGFKDGVVYLAMKGACSGCPSSTATLR 165
Query: 175 NGVQNMLQFYIPE 187
+G++N+L+ ++P+
Sbjct: 166 HGIENLLKHFLPQ 178
Score = 45.1 bits (105), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++TR+RP V DGGDI F F+DGV+
Sbjct: 117 IKELIETRVRPAVAGDGGDIVFRGFKDGVV 146
>gi|452847968|gb|EME49900.1| hypothetical protein DOTSEDRAFT_68641 [Dothistroma septosporum
NZE10]
Length = 265
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 96/153 (62%), Gaps = 13/153 (8%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
+ SPL L ++GV SVF+G D+ITVTK D W +KPE+F+ I + ++G P++
Sbjct: 66 HPSPLAANLMNVDGVTSVFYGKDYITVTK-DSSTPWAHVKPEVFSLITEAVTNGQPLVNT 124
Query: 106 -----------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
A +++ +D+E V MI ELLDTRIRP +QEDGGDI+F F G
Sbjct: 125 VENKTGEEGQGSAVSAAEATYDPEDEEVVGMITELLDTRIRPAIQEDGGDIEFRGFHDGQ 184
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V LK++G+C +C SS VTLKNG+++ML Y+ E
Sbjct: 185 VLLKLRGACRTCDSSTVTLKNGIESMLMHYVEE 217
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/29 (75%), Positives = 24/29 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI ELLDTRIRP +QEDGGDI+F F DG
Sbjct: 155 MITELLDTRIRPAIQEDGGDIEFRGFHDG 183
>gi|71654974|ref|XP_816097.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70881201|gb|EAN94246.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 280
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%), Gaps = 8/173 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F S + L+ PG ++DFP AY SPL ++LF I+GV++V+ ++ITV ++ V
Sbjct: 75 LRFYSMELSFLK-PGFSMDFPNAGHAYKSPLAEILFSIDGVEAVYIADEYITV-RKGHLV 132
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTD------AQPSSDTVIHEDDDETVQMIKELLDTRI 134
DW + P I +I +F S + +L++ + + DT +DDDE + +KELL TRI
Sbjct: 133 DWDSILPMIKESIAEFAESKVNILSEEGEELLSGHNEDTEPKDDDDEVILAVKELLATRI 192
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
RP +Q DGG+++++ G V + ++G+C SCPS+ VTLKNG++ ML +IPE
Sbjct: 193 RPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLMHWIPE 245
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL TRIRP +Q DGG+++++ DG +
Sbjct: 184 VKELLATRIRPMLQADGGNVRYLDMDDGTV 213
>gi|410944411|ref|ZP_11376152.1| NifU protein [Gluconobacter frateurii NBRC 101659]
Length = 212
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/153 (45%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 36 QTIDFPTGQAAYC-SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T+DF AA S L + LF + VK VF G DF+++TK D V W +KP + +T+
Sbjct: 52 RTVDFGEASAAEGRSELAETLFALPDVKRVFLGSDFVSITKAPD-VSWGDMKPVVLSTLT 110
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
FF SG VL + + +D + V I++LLDTR+RP V DGGDI F ++ G+
Sbjct: 111 TFFESGKAVLAGGDEALKYDVAPEDADVVVRIRDLLDTRVRPAVAGDGGDIAFRGYKDGI 170
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 171 VYLTMQGACSGCPSSRATLKHGVENMLRHYVPE 203
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I++LLDTR+RP V DGGDI F ++DG++
Sbjct: 142 IRDLLDTRVRPAVAGDGGDIAFRGYKDGIV 171
>gi|395766112|ref|ZP_10446695.1| hypothetical protein MCO_01571 [Bartonella sp. DB5-6]
gi|395410062|gb|EJF76636.1| hypothetical protein MCO_01571 [Bartonella sp. DB5-6]
Length = 192
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 94/151 (62%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I V VF G+DFITV+K++ + W+ LKP I TIM+ F S PV
Sbjct: 35 EAAKNSPLAAKLFNIPNVNGVFLGYDFITVSKKEGE--WQHLKPVILGTIMEHFLSNDPV 92
Query: 104 LTDA-------QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+T ++ E D + V IKELL+TRIRP V DGGDI F F+ G+V
Sbjct: 93 VTTNATTQAQTHALNEEFYDEKDADIVLTIKELLETRIRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 153 LNMRGACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TRIRP V DGGDI F F++G++
Sbjct: 122 IKELLETRIRPAVANDGGDITFRGFENGIV 151
>gi|319409218|emb|CBI82862.1| NifU-related protein [Bartonella schoenbuchensis R1]
Length = 196
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 70/151 (46%), Positives = 91/151 (60%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A SPL LF I V SV GHDFI VTK D + W+ LKP I TIM+ F S P
Sbjct: 35 EADQNSPLAAKLFTIPNVSSVLLGHDFIAVTKNDGE--WQHLKPAILGTIMEHFLSNDPT 92
Query: 104 L-------TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+ T A + + E D + V IKE+L+TR+RP V DGGDI F F+ G+V
Sbjct: 93 VINDATLQTQAPEAYEEFYDEKDADIVMTIKEILETRVRPAVANDGGDITFRGFEDGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLK+G++N+L+ +IPE
Sbjct: 153 LNMRGACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.1 bits (105), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKE+L+TR+RP V DGGDI F F+DG++
Sbjct: 122 IKEILETRVRPAVANDGGDITFRGFEDGIV 151
>gi|68472639|ref|XP_719638.1| hypothetical protein CaO19.9614 [Candida albicans SC5314]
gi|68472898|ref|XP_719514.1| hypothetical protein CaO19.2067 [Candida albicans SC5314]
gi|46441335|gb|EAL00633.1| hypothetical protein CaO19.2067 [Candida albicans SC5314]
gi|46441464|gb|EAL00761.1| hypothetical protein CaO19.9614 [Candida albicans SC5314]
Length = 237
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 113/188 (60%), Gaps = 6/188 (3%)
Query: 3 KELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVK 62
K L + PT + ++FIS + +L +T +F T A SPL LF+I GVK
Sbjct: 13 KRLYHFKTLPTPNPNA--LKFISPECNILPMNDKTFEFTTTLQAIHSPLALTLFKIPGVK 70
Query: 63 SVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSS-GLPVLTDAQPSSDTVIHEDDDE 121
SV GHDF+TV KQ D ++W L+PEI + +F +S PV+T E++ E
Sbjct: 71 SVMLGHDFLTVNKQ-DYINWANLRPEIVEQLDEFLTSKKHPVITKELVDEAQREAEEESE 129
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQN 179
+ MIKEL++TRIRP +Q+DGGDI+ F + G V +K+QG+C SC +S TLK+G+++
Sbjct: 130 LISMIKELIETRIRPAIQDDGGDIELKGFDEETGTVFVKLQGACKSCSASEDTLKHGIES 189
Query: 180 MLQFYIPE 187
ML Y+ E
Sbjct: 190 MLMHYVEE 197
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKEL++TRIRP +Q+DGGDI+ F EE G G CS
Sbjct: 133 MIKELIETRIRPAIQDDGGDIELKGFD----EETGTVFVKLQGACKSCS 177
>gi|46107542|ref|XP_380830.1| hypothetical protein FG00654.1 [Gibberella zeae PH-1]
Length = 304
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 101/165 (61%), Gaps = 17/165 (10%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P + SPL L I+GV SVF+G DFITVTK D +W ++PEIFA I
Sbjct: 110 PRATISPP-----HPSPLAAKLMNIDGVTSVFYGADFITVTKAAD-ANWAHIRPEIFALI 163
Query: 94 MDFFSSGLPVLT---------DAQPSSDTVIH-EDDDETVQMIKELLDTRIRPTVQEDGG 143
+ ++G ++T A D++ + E+D E V MIKELL+TRIRP +QEDGG
Sbjct: 164 TEAITAGEQIVTISERREGEAGAPVEEDSLAYNENDSEVVGMIKELLETRIRPAIQEDGG 223
Query: 144 DIQFISFQG-GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI F F G V L+++G+C +C SS VTLKNG++ ML YI E
Sbjct: 224 DIDFRGFDDEGYVHLRLRGACRTCDSSTVTLKNGIEGMLMHYIEE 268
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP +QEDGGDI F F D
Sbjct: 205 MIKELLETRIRPAIQEDGGDIDFRGFDD 232
>gi|90420546|ref|ZP_01228453.1| putative nitrogen-fixing NifU domain protein [Aurantimonas
manganoxydans SI85-9A1]
gi|90335274|gb|EAS49027.1| putative nitrogen-fixing NifU domain protein [Aurantimonas
manganoxydans SI85-9A1]
Length = 191
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 90/145 (62%), Gaps = 7/145 (4%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
AA SPL L + GV VFFG+DF+TV+K D DW+ LKP I A +M+ F PV+
Sbjct: 36 AANRSPLAARLMDVPGVTGVFFGYDFVTVSK--DGPDWQHLKPAILAGLMEHFMGNEPVM 93
Query: 105 TD-----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
T A P + D+ TV IKELL+TR+RP V +DGGDI F ++ G V L M
Sbjct: 94 TAQGSNAAMPDGEEFFEPGDEGTVATIKELLETRVRPAVAQDGGDITFRGYRDGTVYLNM 153
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFY 184
+G+C CPSS TLK+G+QN+L+ +
Sbjct: 154 RGACAGCPSSTATLKHGIQNLLRHF 178
Score = 44.7 bits (104), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+TR+RP V +DGGDI F ++DG +
Sbjct: 120 IKELLETRVRPAVAQDGGDITFRGYRDGTV 149
>gi|453331572|dbj|GAC86486.1| NifU protein [Gluconobacter thailandicus NBRC 3255]
Length = 205
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/153 (46%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 36 QTIDFPTGQAAYC-SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T+DF AA S L + LF + VK VF G DF+++TK D V W +KP + +T+
Sbjct: 45 RTVDFGEASAAEGRSELAETLFALPDVKRVFLGSDFVSITKAPD-VSWGDMKPVVLSTLT 103
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
FF SG VL + I +D + V I++LLDTR+RP V DGGDI F ++ GV
Sbjct: 104 TFFESGRDVLAGDDEALKYDIAPEDADVVVRIRDLLDTRVRPAVAGDGGDIAFRGYKDGV 163
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 164 VYLTMQGACSGCPSSRATLKHGVENMLRHYVPE 196
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I++LLDTR+RP V DGGDI F ++DGV+
Sbjct: 135 IRDLLDTRVRPAVAGDGGDIAFRGYKDGVV 164
>gi|408395926|gb|EKJ75097.1| hypothetical protein FPSE_04717 [Fusarium pseudograminearum CS3096]
Length = 304
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 101/165 (61%), Gaps = 17/165 (10%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P TI P + SPL L I+GV SVF+G DFITVTK D +W ++PEIFA I
Sbjct: 110 PRATISPP-----HPSPLAAKLMNIDGVTSVFYGADFITVTKAAD-ANWAHIRPEIFALI 163
Query: 94 MDFFSSGLPVLT---------DAQPSSDTVIH-EDDDETVQMIKELLDTRIRPTVQEDGG 143
+ ++G ++T A D++ + E+D E V MIKELL+TRIRP +QEDGG
Sbjct: 164 TEAITAGEQIVTISERREGEAGAPVEEDSLAYNENDSEVVGMIKELLETRIRPAIQEDGG 223
Query: 144 DIQFISFQG-GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DI F F G V L+++G+C +C SS VTLKNG++ ML YI E
Sbjct: 224 DIDFRGFDDEGYVHLRLRGACRTCDSSTVTLKNGIEGMLMHYIEE 268
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/28 (75%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TRIRP +QEDGGDI F F D
Sbjct: 205 MIKELLETRIRPAIQEDGGDIDFRGFDD 232
>gi|395784548|ref|ZP_10464382.1| hypothetical protein ME3_01038 [Bartonella melophagi K-2C]
gi|395422380|gb|EJF88580.1| hypothetical protein ME3_01038 [Bartonella melophagi K-2C]
Length = 196
Score = 136 bits (342), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/146 (46%), Positives = 90/146 (61%), Gaps = 9/146 (6%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD-- 106
SPL LF I V SV G+DFI VTK + + W+ LKP I TIM+ F S P +T+
Sbjct: 40 SPLAAKLFTIPNVSSVLLGYDFIAVTKNEGE--WQHLKPAILGTIMEHFLSNDPTITNDA 97
Query: 107 -----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQG 161
A + + E D + V IKE+L+TRIRP V DGGDI F F+ G+V L M+G
Sbjct: 98 TLQTQAPEAYEEFYDEKDADIVMTIKEILETRIRPAVANDGGDITFCGFENGIVYLNMRG 157
Query: 162 SCTSCPSSVVTLKNGVQNMLQFYIPE 187
+C CPSS TLK+G++N+L+ +IPE
Sbjct: 158 ACAGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKE+L+TRIRP V DGGDI F F++G++
Sbjct: 122 IKEILETRIRPAVANDGGDITFCGFENGIV 151
>gi|126131446|ref|XP_001382248.1| hypothetical protein PICST_76567 [Scheffersomyces stipitis CBS
6054]
gi|126094073|gb|ABN64219.1| nitrogen fixing protein [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 107/174 (61%), Gaps = 8/174 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++FIS + +L G+T +F + + SPL LF+I GV+SV G +F+TV KQD +
Sbjct: 28 LKFISPECNILPMAGKTFEFTSTLQSVHSPLALRLFKIPGVRSVMLGENFLTVNKQDH-I 86
Query: 81 DWKLLKPEIFATIMDFFS-----SGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIR 135
+W L+PE+ + DF + S L D V +D E V MIKEL++TRIR
Sbjct: 87 NWANLRPEVVELMDDFLTTKQEPSITKELVDQSQQESEVAEAEDSEIVSMIKELIETRIR 146
Query: 136 PTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
P +Q+DGGDI++ +F + G V LK+QG+C SC SS TLK+G+++ML YI E
Sbjct: 147 PAIQDDGGDIEYKAFDEETGTVFLKLQGACKSCSSSEDTLKHGIESMLMHYIEE 200
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKEL++TRIRP +Q+DGGDI++ +F EE G G CS
Sbjct: 136 MIKELIETRIRPAIQDDGGDIEYKAFD----EETGTVFLKLQGACKSCS 180
>gi|57239492|ref|YP_180628.1| hypothetical protein Erum7660 [Ehrlichia ruminantium str.
Welgevonden]
gi|58579471|ref|YP_197683.1| hypothetical protein ERWE_CDS_08070 [Ehrlichia ruminantium str.
Welgevonden]
gi|57161571|emb|CAH58499.1| putative NifU-related protein [Ehrlichia ruminantium str.
Welgevonden]
gi|58418097|emb|CAI27301.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
Welgevonden]
Length = 185
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 102/174 (58%), Gaps = 3/174 (1%)
Query: 16 EDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTK 75
ED + + F G+ G+ +F A SP K LF IE + SVFFG DFI+VTK
Sbjct: 6 EDTPNPNTLKFMPGIPVNNGKIGEFTDSITAESSPFAKALFEIEHIVSVFFGGDFISVTK 65
Query: 76 QDDDVDWKLLKPEIFATIMDFFS--SGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTR 133
D ++W +LKPEI IMDF + V + + D+E V IKEL+D
Sbjct: 66 SSD-IEWDVLKPEILTVIMDFLTLNPNDSVENNDEEDLQEFFDAKDEEIVSKIKELIDDY 124
Query: 134 IRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
I+P V +DGGDI+F + G+V +K++G+C+ CPS+ +TLK G+ NML +Y+P+
Sbjct: 125 IKPAVAQDGGDIKFKGYSNGIVFVKLRGACSGCPSASITLKEGIYNMLTYYLPD 178
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL+D I+P V +DGGDI+F + +G++
Sbjct: 117 IKELIDDYIKPAVAQDGGDIKFKGYSNGIV 146
>gi|321261141|ref|XP_003195290.1| iron homeostasis-related protein [Cryptococcus gattii WM276]
gi|317461763|gb|ADV23503.1| Iron homeostasis-related protein, putative [Cryptococcus gattii
WM276]
Length = 309
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV G +F ++A SPL L I+G+ VFFG DF+T +K DD W
Sbjct: 93 LKFIPGVQVTNGAAHEFLDLRSALQSPLATRLLTIDGITGVFFGPDFVTCSK-DDSYSWS 151
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSS---DTVIHEDDDETVQMIKELLDTRIRPTVQE 140
+LKPE+FA +M+ FSSG + + S DT I + D E V MIKELL+TR+RP + E
Sbjct: 152 ILKPEVFAVLMEHFSSGASLFKEGSGESQAEDTRILDTDSEIVGMIKELLETRVRPAIME 211
Query: 141 DGGDIQFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI++ F G+VKLK++GSC C SS VTLKNG++ ML Y+PE
Sbjct: 212 DGGDIEYRGFDEVTGIVKLKLKGSCRGCSSSSVTLKNGIERMLTHYVPE 260
Score = 43.5 bits (101), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TR+RP + EDGGDI++ F +
Sbjct: 196 MIKELLETRVRPAIMEDGGDIEYRGFDE 223
>gi|339246591|ref|XP_003374929.1| putative HECT-domain protein [Trichinella spiralis]
gi|316971797|gb|EFV55531.1| putative HECT-domain protein [Trichinella spiralis]
Length = 626
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/125 (53%), Positives = 89/125 (71%), Gaps = 2/125 (1%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G+ PG+T +FP +A SPL + +FRI+GVKSVFFG DFITVTK + DW
Sbjct: 14 LKFLPGIPVLPGRTAEFPNRPSAENSPLARAIFRIKGVKSVFFGEDFITVTKNSEVKDWV 73
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGG 143
+KPEIF+TIMDFF+S ++ D D +DD++TV MIK+LL+TRIRPTVQ+DGG
Sbjct: 74 TMKPEIFSTIMDFFTSKQDIIIDDSTEKDAA--DDDNDTVAMIKDLLNTRIRPTVQDDGG 131
Query: 144 DIQFI 148
D+ F+
Sbjct: 132 DVVFM 136
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/24 (75%), Positives = 23/24 (95%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFI 24
MIK+LL+TRIRPTVQ+DGGD+ F+
Sbjct: 113 MIKDLLNTRIRPTVQDDGGDVVFM 136
>gi|395788680|ref|ZP_10468230.1| hypothetical protein ME7_01565 [Bartonella birtlesii LL-WM9]
gi|395407546|gb|EJF74201.1| hypothetical protein ME7_01565 [Bartonella birtlesii LL-WM9]
Length = 192
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 93/151 (61%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A SPL LF I V VF G+DFITV+K++ + W+ LKP I TIM+ F S PV
Sbjct: 35 EAVKNSPLAAKLFNIPNVNGVFLGYDFITVSKKEGE--WQHLKPVILGTIMEHFLSNDPV 92
Query: 104 LTDA-------QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+T ++ E D + V IKELL+TRIRP V DGGDI F F+ G+V
Sbjct: 93 ITTNATTQAQTHALNEEFYDEKDADIVLTIKELLETRIRPAVANDGGDITFRGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+GSC CPSS TLK+G++N+L+ +IPE
Sbjct: 153 LNMRGSCAGCPSSTATLKHGIENLLRHFIPE 183
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELL+TRIRP V DGGDI F F++G+ L G P+ A + LL
Sbjct: 122 IKELLETRIRPAVANDGGDITFRGFENGIVYLNMRGSCAGCPSSTATLKHGIENLL 177
>gi|71662836|ref|XP_818418.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883670|gb|EAN96567.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 280
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 110/173 (63%), Gaps = 8/173 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F S + L+ PG ++DFP AY SPL ++LF I+GV++V+ ++ITV ++ V
Sbjct: 75 LRFYSMELSFLK-PGFSMDFPNAGHAYKSPLAEILFSIDGVEAVYIADEYITV-RKGHLV 132
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTD------AQPSSDTVIHEDDDETVQMIKELLDTRI 134
DW + P I +I +F + VL++ + + DT +DDDE + +KELL TRI
Sbjct: 133 DWDAILPMIKESIEEFAERKMNVLSEEGEDLLSGHNEDTEPKDDDDEVILAVKELLATRI 192
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
RP +Q DGG+++++ G V + ++G+C SCPS+ VTLKNG++ ML +IPE
Sbjct: 193 RPMLQADGGNVRYLDMDDGTVFVLLEGACKSCPSASVTLKNGIERMLMHWIPE 245
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL TRIRP +Q DGG+++++ DG +
Sbjct: 184 VKELLATRIRPMLQADGGNVRYLDMDDGTV 213
>gi|414342401|ref|YP_006983922.1| NifU protein [Gluconobacter oxydans H24]
gi|411027736|gb|AFW00991.1| NifU protein [Gluconobacter oxydans H24]
Length = 205
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 96/153 (62%), Gaps = 2/153 (1%)
Query: 36 QTIDFPTGQAAYC-SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T+DF AA S L + LF + VK VF G DF+++TK D V W +KP + +T+
Sbjct: 45 RTVDFGEASAAEGRSELAETLFALPDVKRVFLGSDFVSITKAPD-VSWGDMKPVVLSTLT 103
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
FF SG VL + I +D + V I++LLDTR+RP V DGGDI F ++ G+
Sbjct: 104 TFFESGRDVLAGDDEALKYDIAPEDADVVVRIRDLLDTRVRPAVAGDGGDIAFRGYKDGI 163
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V L MQG+C+ CPSS TLK+GV+NML+ Y+PE
Sbjct: 164 VYLTMQGACSGCPSSRATLKHGVENMLRHYVPE 196
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I++LLDTR+RP V DGGDI F ++DG++
Sbjct: 135 IRDLLDTRVRPAVAGDGGDIAFRGYKDGIV 164
>gi|149248632|ref|XP_001528703.1| hypothetical protein LELG_01223 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448657|gb|EDK43045.1| hypothetical protein LELG_01223 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 248
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 112/197 (56%), Gaps = 15/197 (7%)
Query: 3 KELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVK 62
+ LL + T E+ ++FIS + +L T +F + A SPL LF+I GVK
Sbjct: 14 RRLLHFKTASTPNENA--LKFISPESPILPVANTTFEFNSTLQAIHSPLALQLFKIPGVK 71
Query: 63 SVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFF------SSGLPVLT----DAQPSSD 112
S+ GHDF+TV K D+ DW L PE+ + F S +PV+T + S
Sbjct: 72 SIMLGHDFLTVNKLDNH-DWNSLSPEVMDVMNKFLDKAGENSGKVPVVTQELLNKAESER 130
Query: 113 TVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSV 170
EDD E V MIKEL++TRIRP +Q+DGGDI++ F + G V LK+QG+C SC +S
Sbjct: 131 LAEDEDDSELVLMIKELIETRIRPAIQDDGGDIEYKGFDEETGTVFLKLQGACKSCSASE 190
Query: 171 VTLKNGVQNMLQFYIPE 187
TLK G+++ML YI E
Sbjct: 191 DTLKGGIESMLMHYIEE 207
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKEL++TRIRP +Q+DGGDI++ F EE G G CS
Sbjct: 143 MIKELIETRIRPAIQDDGGDIEYKGFD----EETGTVFLKLQGACKSCS 187
>gi|58269446|ref|XP_571879.1| iron ion homeostasis-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228115|gb|AAW44572.1| iron ion homeostasis-related protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 309
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV G +F ++A SPL L I+G+ VFFG DF+T +K DD W
Sbjct: 93 LKFIPGVQVTNGAAHEFLDLRSALQSPLATRLLTIDGITGVFFGPDFVTCSK-DDSYSWS 151
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSS---DTVIHEDDDETVQMIKELLDTRIRPTVQE 140
+LKPE+FA +M+ FSSG + + S DT I + D E V MIKELL+TR+RP + E
Sbjct: 152 ILKPEVFAVLMEHFSSGASLFKEGSGESQAEDTRILDTDSEIVGMIKELLETRVRPAIME 211
Query: 141 DGGDIQFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI++ F G+VKLK++GSC C SS VTLKNG++ ML Y+PE
Sbjct: 212 DGGDIEYRGFDEDTGLVKLKLKGSCRGCSSSSVTLKNGIERMLTHYVPE 260
Score = 43.9 bits (102), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TR+RP + EDGGDI++ F +
Sbjct: 196 MIKELLETRVRPAIMEDGGDIEYRGFDE 223
>gi|134114121|ref|XP_774308.1| hypothetical protein CNBG2890 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256943|gb|EAL19661.1| hypothetical protein CNBG2890 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 309
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV G +F ++A SPL L I+G+ VFFG DF+T +K DD W
Sbjct: 93 LKFIPGVQVTNGAAHEFLDLRSALQSPLATRLLTIDGITGVFFGPDFVTCSK-DDSYSWS 151
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSS---DTVIHEDDDETVQMIKELLDTRIRPTVQE 140
+LKPE+FA +M+ FSSG + + S DT I + D E V MIKELL+TR+RP + E
Sbjct: 152 ILKPEVFAVLMEHFSSGASLFKEGSGESQAEDTRILDTDSEIVGMIKELLETRVRPAIME 211
Query: 141 DGGDIQFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI++ F G+VKLK++GSC C SS VTLKNG++ ML Y+PE
Sbjct: 212 DGGDIEYRGFDEDTGLVKLKLKGSCRGCSSSSVTLKNGIERMLTHYVPE 260
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TR+RP + EDGGDI++ F +
Sbjct: 196 MIKELLETRVRPAIMEDGGDIEYRGFDE 223
>gi|398382814|ref|ZP_10540895.1| thioredoxin-like protein [Sphingobium sp. AP49]
gi|397726214|gb|EJK86655.1| thioredoxin-like protein [Sphingobium sp. AP49]
Length = 192
Score = 135 bits (341), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 99/171 (57%), Gaps = 16/171 (9%)
Query: 34 PGQTI-------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
PGQ + DF T + A SPL LF + V VFFG DFI+VT +W+ +K
Sbjct: 18 PGQAVMGATGTRDFATPEEAEASPLADALFGLGDVTGVFFGGDFISVTIAPG-AEWRDVK 76
Query: 87 PEIFATIMDFFSSGLPVLTDAQPSSDTVIHED--------DDETVQMIKELLDTRIRPTV 138
PEI + ++D FS+ +P+ + +V E+ D E V IK+L++TR+RP V
Sbjct: 77 PEILSILLDHFSANMPLFAPGSAAGISVPAEEEGFADDPEDAEIVDQIKDLIETRVRPAV 136
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
DGGDI + F G V L+MQG+C CPSS TLKNG++ +L+ Y+PE T
Sbjct: 137 ANDGGDIIYRGFDKGTVFLRMQGACAGCPSSSATLKNGIEQLLKHYVPEVT 187
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
IK+L++TR+RP V DGGDI + F G L G P+ A + + +LL
Sbjct: 124 IKDLIETRVRPAVANDGGDIIYRGFDKGTVFLRMQGACAGCPSSSATLKNGIEQLL 179
>gi|395491746|ref|ZP_10423325.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. PAMC 26617]
gi|404254908|ref|ZP_10958876.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. PAMC 26621]
Length = 190
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 94/160 (58%), Gaps = 8/160 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF T + A SPL LF + V VFFG DF++VT DW LKP++ ++D
Sbjct: 27 TRDFATPEDAEASPLADALFGLGDVTGVFFGSDFVSVTAAAG-TDWSALKPDVLGIMVDH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHE-------DDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
FS+ +P+ TV + +D + V IK+L++TRIRP V DGGDI +
Sbjct: 86 FSADMPLFRPGSAGEITVASDSGFADDPEDADIVAQIKDLIETRIRPAVANDGGDIVYRG 145
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F+ G V L MQG+C CPSS TLKNG++ +L++Y+PE T
Sbjct: 146 FEKGKVYLAMQGACAGCPSSSATLKNGIEQLLRYYVPEVT 185
Score = 39.3 bits (90), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG--VLEEPGQTIDFPTGQAAYCSPLGKLL 55
IK+L++TRIRP V DGGDI + F+ G L G P+ A + + +LL
Sbjct: 122 IKDLIETRIRPAVANDGGDIVYRGFEKGKVYLAMQGACAGCPSSSATLKNGIEQLL 177
>gi|405121849|gb|AFR96617.1| NifU-like protein c [Cryptococcus neoformans var. grubii H99]
Length = 303
Score = 135 bits (340), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 106/169 (62%), Gaps = 6/169 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV G +F ++A SPL L I+G+ VFFG DF+T +K DD W
Sbjct: 93 LKFIPGVQVTNGAAHEFLDLRSALQSPLATRLLTIDGITGVFFGPDFVTCSK-DDSYSWS 151
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSS---DTVIHEDDDETVQMIKELLDTRIRPTVQE 140
+LKPE+FA +M+ FSSG + + S DT I + D E V MIKELL+TR+RP + E
Sbjct: 152 ILKPEVFAVLMEHFSSGASLFKEGSGESQAEDTRILDTDSEIVGMIKELLETRVRPAIME 211
Query: 141 DGGDIQFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI++ F G+VKLK++GSC C SS VTLKNG++ ML Y+PE
Sbjct: 212 DGGDIEYRGFDEDTGLVKLKLKGSCRGCSSSSVTLKNGIERMLTHYVPE 260
Score = 43.5 bits (101), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKELL+TR+RP + EDGGDI++ F +
Sbjct: 196 MIKELLETRVRPAIMEDGGDIEYRGFDE 223
>gi|255723790|ref|XP_002546824.1| hypothetical protein CTRG_01129 [Candida tropicalis MYA-3404]
gi|240134715|gb|EER34269.1| hypothetical protein CTRG_01129 [Candida tropicalis MYA-3404]
Length = 237
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 114/189 (60%), Gaps = 7/189 (3%)
Query: 3 KELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVK 62
K L + PT + ++FIS + +L +T +F T A SPL +LF+I GV
Sbjct: 12 KRLYHFKTLPTPNPNA--LKFISEECNILPMEDKTFEFTTTMQAMHSPLALMLFKIPGVN 69
Query: 63 SVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGL-PVLT-DAQPSSDTVIHEDDD 120
SV GHDF+TV KQ D ++W L+PEI + +F +S PV+T + ++ DD
Sbjct: 70 SVMLGHDFLTVNKQ-DYINWANLRPEIVEHLDEFLTSKKQPVITKELIDKANEESEMDDS 128
Query: 121 ETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQ 178
E + MIKEL++TRIRP +Q+DGGDI+ F + G V +K+QG+C SC +S TLK+G++
Sbjct: 129 ELMSMIKELIETRIRPAIQDDGGDIELKGFDEETGTVFVKLQGACKSCSASEDTLKSGIE 188
Query: 179 NMLQFYIPE 187
ML YI E
Sbjct: 189 GMLMHYIEE 197
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 36/73 (49%), Gaps = 13/73 (17%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPL--------- 51
MIKEL++TRIRP +Q+DGGDI+ F EE G G CS
Sbjct: 133 MIKELIETRIRPAIQDDGGDIELKGFD----EETGTVFVKLQGACKSCSASEDTLKSGIE 188
Query: 52 GKLLFRIEGVKSV 64
G L+ IE VK V
Sbjct: 189 GMLMHYIEEVKEV 201
>gi|239946652|ref|ZP_04698405.1| type Fe-S cluster assembly protein NFU [Rickettsia endosymbiont of
Ixodes scapularis]
gi|241563470|ref|XP_002401717.1| conserved hypothetical protein [Ixodes scapularis]
gi|215501909|gb|EEC11403.1| conserved hypothetical protein [Ixodes scapularis]
gi|239920928|gb|EER20952.1| type Fe-S cluster assembly protein NFU [Rickettsia endosymbiont of
Ixodes scapularis]
Length = 190
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 96/138 (69%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F +G PV ++
Sbjct: 40 SKLAESLFHINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVAGFPVFEEST 98
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+ + V H D E + I E+++TR+RP+V +DGGDI + F+ G+VKL ++G+C C
Sbjct: 99 KAGN-VNHSLDGLSEIEKQIVEIIETRVRPSVAQDGGDIIYKGFENGIVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
Score = 38.9 bits (89), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 26/31 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I E+++TR+RP+V +DGGDI + F++G+++
Sbjct: 117 IVEIIETRVRPSVAQDGGDIIYKGFENGIVK 147
>gi|51473845|ref|YP_067602.1| hypothetical protein RT0659 [Rickettsia typhi str. Wilmington]
gi|383752621|ref|YP_005427721.1| hypothetical protein RTTH1527_03170 [Rickettsia typhi str. TH1527]
gi|383843457|ref|YP_005423960.1| hypothetical protein RTB9991CWPP_03175 [Rickettsia typhi str.
B9991CWPP]
gi|51460157|gb|AAU04120.1| conserved hypothetical protein [Rickettsia typhi str. Wilmington]
gi|380759264|gb|AFE54499.1| hypothetical protein RTTH1527_03170 [Rickettsia typhi str. TH1527]
gi|380760104|gb|AFE55338.1| hypothetical protein RTB9991CWPP_03175 [Rickettsia typhi str.
B9991CWPP]
Length = 190
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/163 (46%), Positives = 100/163 (61%), Gaps = 11/163 (6%)
Query: 34 PGQ--TIDFPT-----GQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
PGQ +ID P + S L + LF I VKSVFFG DFITVTK +W+++K
Sbjct: 18 PGQEISIDQPVFFSELAEVKGRSTLAESLFHINNVKSVFFGSDFITVTKHAGG-NWQVIK 76
Query: 87 PEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGD 144
PEI IMD F SG PV + D H D E + I E ++TR+RP V +DGGD
Sbjct: 77 PEILMVIMDHFISGFPVFNE-NTKIDNEKHNIDMLSEIEKQIIETIETRVRPFVTQDGGD 135
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
I + F+ GVVKL ++G+C CPSS +TLKNG+++ML+ +IPE
Sbjct: 136 IIYKGFESGVVKLALRGACLGCPSSTITLKNGIESMLRHFIPE 178
>gi|344234120|gb|EGV65990.1| HIRA-interacting protein 5 [Candida tenuis ATCC 10573]
Length = 250
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 115/192 (59%), Gaps = 16/192 (8%)
Query: 6 LDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVF 65
L + PT D ++F+S + +L +T +F + A SPL LF++ GVKSV
Sbjct: 20 LSFKTYPTPNPDA--LKFVSVEKEILPLENKTFEFTSSLQAIHSPLALKLFKLPGVKSVM 77
Query: 66 FGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGL-PVLT-------DAQPSSDTVIHE 117
G DF+TV KQD V+W L+P++ + F + G PV+T Q S+D
Sbjct: 78 LGPDFLTVNKQDH-VNWSNLRPDVTELMDKFLTDGKDPVITRELIDETQRQMSADEA--- 133
Query: 118 DDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKN 175
DD E V MIKEL++TRIRP +Q+DGGDI++ F + G V LK+QG+C SC SS TLK+
Sbjct: 134 DDSEVVSMIKELIETRIRPAIQDDGGDIEYKGFDEETGTVFLKLQGACKSCSSSEDTLKH 193
Query: 176 GVQNMLQFYIPE 187
G+++ML+ YI E
Sbjct: 194 GMESMLKHYIEE 205
Score = 44.3 bits (103), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKEL++TRIRP +Q+DGGDI++ F EE G G CS
Sbjct: 141 MIKELIETRIRPAIQDDGGDIEYKGFD----EETGTVFLKLQGACKSCS 185
>gi|403530888|ref|YP_006665417.1| hypothetical protein RM11_0996 [Bartonella quintana RM-11]
gi|403232959|gb|AFR26702.1| hypothetical protein RM11_0996 [Bartonella quintana RM-11]
Length = 184
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/151 (47%), Positives = 93/151 (61%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+AA SPL LF I V V G+DFITV+K+D + W+ LKP I TIM+ F S PV
Sbjct: 35 EAAKNSPLAAKLFNIPNVNGVLLGYDFITVSKKDGE--WQHLKPAILGTIMEHFLSDAPV 92
Query: 104 L-TDAQPSSDT------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+ T+A + T E D + V IKELL+TR+RP V DGGDI F F+ G+V
Sbjct: 93 INTNATIQAQTHALNEEFYDEKDVDIVSTIKELLETRVRPAVANDGGDITFCGFENGIVY 152
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L M+G+C CPSS TLK G++N+L+ +I E
Sbjct: 153 LNMRGACAGCPSSTATLKTGIENLLRHFILE 183
Score = 46.6 bits (109), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
IKELL+TR+RP V DGGDI F F++G+ L G P+ A + + LL
Sbjct: 122 IKELLETRVRPAVANDGGDITFCGFENGIVYLNMRGACAGCPSSTATLKTGIENLL 177
>gi|449299220|gb|EMC95234.1| hypothetical protein BAUCODRAFT_35227 [Baudoinia compniacensis UAMH
10762]
Length = 317
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/153 (45%), Positives = 97/153 (63%), Gaps = 13/153 (8%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
+ SPL L ++GV SVF+G D+ITVTK D W +KPE+F+ I + +SG ++
Sbjct: 118 HPSPLAAQLLNVDGVTSVFYGKDYITVTK-DSATPWAHVKPEVFSLITEAVTSGQAIVNI 176
Query: 106 -------DAQPSSDTVIHE----DDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
+ Q SS + +D+E V MI+ELL+TRIRP +QEDGGDI+F F G
Sbjct: 177 VENKTGEEGQGSSSSEAQASYAPEDEEVVGMIQELLETRIRPAIQEDGGDIEFRGFHDGQ 236
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V LK++G+C +C SS VTLKNG+++ML YI E
Sbjct: 237 VLLKLRGACRTCDSSTVTLKNGIESMLMHYIEE 269
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI+ELL+TRIRP +QEDGGDI+F F DG
Sbjct: 207 MIQELLETRIRPAIQEDGGDIEFRGFHDG 235
>gi|254780430|ref|YP_003064843.1| nitrogen fixation protein [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040107|gb|ACT56903.1| nitrogen fixation protein [Candidatus Liberibacter asiaticus str.
psy62]
Length = 189
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 97/170 (57%), Gaps = 19/170 (11%)
Query: 34 PGQ------TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ I F + A SPL +F I G+ SV+FG+DFITV K D DW+ L+P
Sbjct: 18 PGQVVLVEGAIHFSNAKEAEISPLASRIFSIPGIASVYFGYDFITVGK--DQYDWEHLRP 75
Query: 88 EIFATIMDFFSSGLPVLT---------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTV 138
+ IM+ F SG P++ D S D + E D VQ IKE+LD R+RP V
Sbjct: 76 PVLGMIMEHFISGDPIIHNGGLGDMKLDDMGSGDFI--ESDSAVVQRIKEVLDNRVRPAV 133
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
DGGDI F ++ G+V L M+G+C+ CPS+ TLK GV N+L ++PE
Sbjct: 134 ARDGGDIVFKGYRDGIVFLSMRGACSGCPSASETLKYGVANILNHFVPEV 183
Score = 43.1 bits (100), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKE+LD R+RP V DGGDI F ++DG++
Sbjct: 121 IKEVLDNRVRPAVARDGGDIVFKGYRDGIV 150
>gi|332188730|ref|ZP_08390443.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. S17]
gi|332011236|gb|EGI53328.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. S17]
Length = 190
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 97/160 (60%), Gaps = 8/160 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + + A SPL + +F + V VFFG DF++VT VDW +KP++ ++D
Sbjct: 27 TRDFASPEEAAASPLAEAIFNLGDVTGVFFGRDFVSVTIAPG-VDWSDVKPDVLGILLDH 85
Query: 97 FSSGLPVLTD-----AQPSSDTVIHED--DDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
FS+ +P+ A P+ + ++ D + V I+EL+DTR+RP V DGGDI +
Sbjct: 86 FSAQMPLFKQGAADFAVPAEEETFADNPEDADIVAQIRELIDTRVRPAVANDGGDIVYRG 145
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F G V LKMQG+C CPSS TLKNG++ +L+ Y+PE T
Sbjct: 146 FDKGKVYLKMQGACAGCPSSTATLKNGIEQLLRHYVPEVT 185
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG--VLEEPGQTIDFPTGQAAYCSPLGKLL 55
I+EL+DTR+RP V DGGDI + F G L+ G P+ A + + +LL
Sbjct: 122 IRELIDTRVRPAVANDGGDIVYRGFDKGKVYLKMQGACAGCPSSTATLKNGIEQLL 177
>gi|148555295|ref|YP_001262877.1| scaffold protein Nfu/NifU-like protein [Sphingomonas wittichii RW1]
gi|148500485|gb|ABQ68739.1| Scaffold protein Nfu/NifU-like protein [Sphingomonas wittichii RW1]
Length = 192
Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 93/159 (58%), Gaps = 7/159 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF A SPL + LF + V VFFG DF++VT + V+W LKP++ ++D
Sbjct: 30 TRDFVDPDEASASPLAEALFSLGDVTGVFFGRDFVSVTAAEG-VEWTGLKPQVLGVLLDH 88
Query: 97 FSSGLPVLTDAQPSSDTVIHED------DDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
FSS P+ T + + D D + V IK+L+DTR+RP V DGGDI + F
Sbjct: 89 FSSEAPLFTGGSAAEIAIDDSDFTDDPADADIVAQIKDLIDTRVRPAVARDGGDIVYRGF 148
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
Q G V L MQG+C+ CPSS TLK G++ +L+ Y+PE T
Sbjct: 149 QRGTVYLSMQGACSGCPSSAATLKQGIETLLKHYVPEVT 187
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+L+DTR+RP V DGGDI + FQ G +
Sbjct: 124 IKDLIDTRVRPAVARDGGDIVYRGFQRGTV 153
>gi|114571567|ref|YP_758247.1| NifU domain-containing protein [Maricaulis maris MCS10]
gi|114342029|gb|ABI67309.1| nitrogen-fixing NifU domain protein [Maricaulis maris MCS10]
Length = 187
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 103/163 (63%), Gaps = 10/163 (6%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PG+ I +F + + A +PL LF ++GV VFFG DFI +TK D +W +KP
Sbjct: 18 PGREIAPDGPREFESEEDAASAPLAADLFLVDGVSGVFFGEDFIAITKTDA-YEWDHIKP 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDE-TVQMIKELLDTRIRPTVQEDGGDIQ 146
+ TIMD SG P++ + + ++E V+ I EL+DTR+RP V +DGGDI
Sbjct: 77 FLLGTIMDGLQSGRPLVGSETNETGHANYAGENEGLVKEIIELIDTRVRPAVAQDGGDIL 136
Query: 147 FISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F S+ G+V+LKM+G+C+ CPSS +TLK+G++N+L+ YIPE
Sbjct: 137 FHSYLADSGIVRLKMRGACSGCPSSTMTLKSGIENLLKHYIPE 179
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
I EL+DTR+RP V +DGGDI F S+
Sbjct: 116 IIELIDTRVRPAVAQDGGDILFHSY 140
>gi|15604511|ref|NP_221029.1| hypothetical protein RP667 [Rickettsia prowazekii str. Madrid E]
gi|383486656|ref|YP_005404336.1| hypothetical protein MA5_00270 [Rickettsia prowazekii str. GvV257]
gi|383488064|ref|YP_005405743.1| hypothetical protein M9W_03200 [Rickettsia prowazekii str.
Chernikova]
gi|383488909|ref|YP_005406587.1| hypothetical protein M9Y_03205 [Rickettsia prowazekii str.
Katsinyian]
gi|383489749|ref|YP_005407426.1| hypothetical protein MA3_03240 [Rickettsia prowazekii str. Dachau]
gi|383499889|ref|YP_005413250.1| hypothetical protein MA1_03195 [Rickettsia prowazekii str.
BuV67-CWPP]
gi|383500726|ref|YP_005414086.1| hypothetical protein MA7_03195 [Rickettsia prowazekii str. RpGvF24]
gi|386082530|ref|YP_005999108.1| NifU-like protein [Rickettsia prowazekii str. Rp22]
gi|3861205|emb|CAA15105.1| unknown [Rickettsia prowazekii str. Madrid E]
gi|292572295|gb|ADE30210.1| NifU-like protein [Rickettsia prowazekii str. Rp22]
gi|380757021|gb|AFE52258.1| hypothetical protein MA5_00270 [Rickettsia prowazekii str. GvV257]
gi|380758423|gb|AFE53659.1| hypothetical protein MA7_03195 [Rickettsia prowazekii str. RpGvF24]
gi|380760943|gb|AFE49465.1| hypothetical protein M9W_03200 [Rickettsia prowazekii str.
Chernikova]
gi|380761788|gb|AFE50309.1| hypothetical protein M9Y_03205 [Rickettsia prowazekii str.
Katsinyian]
gi|380762635|gb|AFE51155.1| hypothetical protein MA1_03195 [Rickettsia prowazekii str.
BuV67-CWPP]
gi|380763472|gb|AFE51991.1| hypothetical protein MA3_03240 [Rickettsia prowazekii str. Dachau]
Length = 190
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 92/142 (64%), Gaps = 4/142 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVF G DFITVTKQ +W+++KPEI IMD F SG PV +
Sbjct: 40 SALAESLFHINNVKSVFLGSDFITVTKQARG-NWQVIKPEILMVIMDHFISGFPVFNENT 98
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
D H D E + I E ++TR+RP V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 99 KIDDEK-HNLDMLSEIEKQIIETIETRVRPFVTQDGGDIIYKGFESGVVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFYIPET 188
PSS +TLKNG+++ML+ +IPE
Sbjct: 158 PSSTITLKNGIESMLKHFIPEV 179
>gi|427407899|ref|ZP_18898101.1| hypothetical protein HMPREF9718_00575 [Sphingobium yanoikuyae ATCC
51230]
gi|425713862|gb|EKU76874.1| hypothetical protein HMPREF9718_00575 [Sphingobium yanoikuyae ATCC
51230]
Length = 192
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 98/171 (57%), Gaps = 16/171 (9%)
Query: 34 PGQTI-------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
PGQ + DF + + A SPL LF + V VFFG DFI+VT +W +K
Sbjct: 18 PGQAVMGAAGTRDFASPEEAEASPLADALFGLGDVTGVFFGADFISVTIAPG-AEWSDVK 76
Query: 87 PEIFATIMDFFSSGLPVLTDAQPSSDTVIHED--------DDETVQMIKELLDTRIRPTV 138
PEI + ++D FS+ +P+ + +V E+ D E V IK+L++TR+RP V
Sbjct: 77 PEILSILLDHFSANMPLFAAGTAAGFSVPAEEEAFTDDPEDAEIVDQIKDLIETRVRPAV 136
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
DGGDI + F G V L+MQG+C CPSS TLKNG++ +L+ Y+PE T
Sbjct: 137 ANDGGDIIYRGFDKGTVYLRMQGACAGCPSSSATLKNGIEQLLKHYVPEVT 187
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
IK+L++TR+RP V DGGDI + F G L G P+ A + + +LL
Sbjct: 124 IKDLIETRVRPAVANDGGDIIYRGFDKGTVYLRMQGACAGCPSSSATLKNGIEQLL 179
>gi|241950625|ref|XP_002418035.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641374|emb|CAX43334.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 237
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 113/188 (60%), Gaps = 6/188 (3%)
Query: 3 KELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVK 62
K L + PT + ++FIS + +L +T +F T A SPL LF+I GVK
Sbjct: 13 KRLYHFKTLPTPNPNA--LKFISPECNILPMEDKTFEFTTTLQAIHSPLALTLFKIPGVK 70
Query: 63 SVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSS-GLPVLTDAQPSSDTVIHEDDDE 121
SV G+DF+TV KQ D ++W L+PEI + +F +S PV+T E++ E
Sbjct: 71 SVMLGYDFLTVNKQ-DYINWANLRPEIVEHLDEFLTSKKHPVITKELVDEAQREAEEESE 129
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQN 179
+ MIKEL++TRIRP +Q+DGGDI+ F + G V +K+QG+C SC +S TLK+G+++
Sbjct: 130 LISMIKELIETRIRPAIQDDGGDIELKGFDEETGTVFVKLQGACKSCSASEDTLKHGIES 189
Query: 180 MLQFYIPE 187
ML Y+ E
Sbjct: 190 MLMHYVEE 197
Score = 42.7 bits (99), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKEL++TRIRP +Q+DGGDI+ F EE G G CS
Sbjct: 133 MIKELIETRIRPAIQDDGGDIELKGFD----EETGTVFVKLQGACKSCS 177
>gi|379023191|ref|YP_005299852.1| NifU-like domain-containing protein [Rickettsia canadensis str.
CA410]
gi|376324129|gb|AFB21370.1| NifU-like domain-containing protein [Rickettsia canadensis str.
CA410]
Length = 189
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SG PV ++
Sbjct: 40 SKLAESLFHINNVKSVFFGSDFITVTKQPES-NWQVIKPEILMVIMDHFVSGFPVFEEST 98
Query: 109 PSSDTVIHEDDD--ETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 99 -KADNVQHNLDGLLEIEKQIIEIIETRVRPSVAQDGGDIIYKCFENGVVKLVLRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFYIPET 188
PSS +TLKNG+++ML+ ++PE
Sbjct: 158 PSSTITLKNGIESMLKHFVPEV 179
>gi|426258151|ref|XP_004022682.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Ovis aries]
Length = 211
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 64/98 (65%), Positives = 79/98 (80%), Gaps = 1/98 (1%)
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
F ++DFFSSGLP++T+ P ++ EDDDE V MIKELLDTRI PTV EDGGD+ +
Sbjct: 95 FLALVDFFSSGLPLVTEETPLEESG-SEDDDEVVAMIKELLDTRIGPTVHEDGGDVVYKR 153
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G+V+LK QGSCTS PSS++TLKNG+QNMLQFYIPE
Sbjct: 154 FEDGIVQLKRQGSCTSYPSSIITLKNGIQNMLQFYIPE 191
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLLF-- 56
MIKELLDTRI PTV EDGGD+ + F+DG+ L+ G +P+ + + +L
Sbjct: 129 MIKELLDTRIGPTVHEDGGDVVYKRFEDGIVQLKRQGSCTSYPSSIITLKNGIQNMLQFY 188
Query: 57 --RIEGVKSVF 65
+EGV+ V
Sbjct: 189 IPEVEGVEKVM 199
>gi|157804045|ref|YP_001492594.1| NifU-like domain-containing protein [Rickettsia canadensis str.
McKiel]
gi|157785308|gb|ABV73809.1| NifU-like domain [Rickettsia canadensis str. McKiel]
Length = 189
Score = 134 bits (337), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SG PV ++
Sbjct: 40 SKLAESLFHINNVKSVFFGSDFITVTKQPES-NWQVIKPEILMVIMDHFVSGFPVFEEST 98
Query: 109 PSSDTVIHEDDD--ETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 99 -KADNVQHNLDGLLEIEKQIIEIIETRVRPSVAQDGGDIIYKCFENGVVKLVLRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFYIPET 188
PSS +TLKNG+++ML+ ++PE
Sbjct: 158 PSSTITLKNGIESMLKHFVPEV 179
>gi|381199587|ref|ZP_09906734.1| Scaffold protein Nfu/NifU [Sphingobium yanoikuyae XLDN2-5]
Length = 192
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/171 (40%), Positives = 98/171 (57%), Gaps = 16/171 (9%)
Query: 34 PGQTI-------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
PGQ + DF + + A SPL LF + V VFFG DFI+VT +W +K
Sbjct: 18 PGQAVMGAAGTRDFASPEEAEVSPLADALFGLGDVTGVFFGADFISVTIAPG-AEWSDVK 76
Query: 87 PEIFATIMDFFSSGLPVLTDAQPSSDTVIHED--------DDETVQMIKELLDTRIRPTV 138
PEI + ++D FS+ +P+ + +V E+ D E V IK+L++TR+RP V
Sbjct: 77 PEILSILLDHFSANMPLFAAGTAAGFSVPAEEEAFTDDPEDAEIVDQIKDLIETRVRPAV 136
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
DGGDI + F G V L+MQG+C CPSS TLKNG++ +L+ Y+PE T
Sbjct: 137 ANDGGDIIYRGFDKGTVYLRMQGACAGCPSSSATLKNGIEQLLKHYVPEVT 187
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
IK+L++TR+RP V DGGDI + F G L G P+ A + + +LL
Sbjct: 124 IKDLIETRVRPAVANDGGDIIYRGFDKGTVYLRMQGACAGCPSSSATLKNGIEQLL 179
>gi|73667413|ref|YP_303429.1| nitrogen-fixing NifU, C-terminal, partial [Ehrlichia canis str.
Jake]
gi|72394554|gb|AAZ68831.1| Nitrogen-fixing NifU, C-terminal [Ehrlichia canis str. Jake]
Length = 186
Score = 134 bits (336), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/171 (39%), Positives = 102/171 (59%), Gaps = 13/171 (7%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F GV G+ +F AA SPL LF++E VK VFFG DF+++TK D+ ++W
Sbjct: 14 LKFMPGVPVNNGKVSEFADNIAAESSPLAAALFKVEHVKGVFFGGDFVSITKSDE-IEWD 72
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSD-------TVIHEDDDETVQMIKELLDTRIRP 136
+LKPE+ IM+F + L + D E D E V IKEL++ ++P
Sbjct: 73 VLKPEVLTVIMEFLT-----LNPGDSTEDFNEEETDEFFDEKDVEMVDKIKELINDYVKP 127
Query: 137 TVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V +DGGDI+F + G+V +K++G+C+ CPS+ +TLK G+ NML +YIP+
Sbjct: 128 AVMQDGGDIKFKGYSNGIVFVKLRGACSGCPSASITLKEGIYNMLSYYIPD 178
Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL++ ++P V +DGGDI+F + +G++
Sbjct: 117 IKELINDYVKPAVMQDGGDIKFKGYSNGIV 146
>gi|441498180|ref|ZP_20980381.1| NifU domain protein [Fulvivirga imtechensis AK7]
gi|441438087|gb|ELR71430.1| NifU domain protein [Fulvivirga imtechensis AK7]
Length = 193
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G + DFP +A +PL + LF E V VF+ +FITVTK+ D V+W +K +I I
Sbjct: 35 GMSYDFPDRTSAKDAPLAEALFEFEFVDRVFYMSNFITVTKKGD-VEWVEIKDKIKEHIQ 93
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
+ SG P++ + + + + E+D ETV+ IK +LD IRP V++DGG I F S+ GV
Sbjct: 94 KYLESGKPIINEI--NKEELFDENDSETVKKIKGILDEYIRPAVEQDGGAIAFHSYHEGV 151
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VK+ +QGSC+ CPSS VTLK G++N+L+ +PE
Sbjct: 152 VKVLLQGSCSGCPSSTVTLKAGIENLLKRMLPE 184
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IK +LD IRP V++DGG I F S+ +GV++
Sbjct: 123 IKGILDEYIRPAVEQDGGAIAFHSYHEGVVK 153
>gi|254797154|ref|YP_003081992.1| hira-interacting protein 5 [Neorickettsia risticii str. Illinois]
gi|254590399|gb|ACT69761.1| hira-interacting protein 5 [Neorickettsia risticii str. Illinois]
Length = 180
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 105/149 (70%), Gaps = 4/149 (2%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DF T A + L ++L+ I+GV V G DF++V+K +D +W +LKP+IF+ ++++F+
Sbjct: 29 DFVTASDASGNKLPEMLWEIQGVSGVMLGVDFVSVSKTED-AEWDVLKPQIFSVLVEYFT 87
Query: 99 SGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
+G + +P ++ E DE + I+E++DT++RP+V EDGG++ F ++ G+V LK
Sbjct: 88 TGSDFV---RPVTEDEEVECTDEVSKKIREIIDTKVRPSVIEDGGNVVFKGYKDGIVYLK 144
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+QG+C CPS+ VTLK+G++N+LQ+Y+PE
Sbjct: 145 LQGACAGCPSASVTLKDGIENLLQYYVPE 173
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 26/30 (86%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+E++DT++RP+V EDGG++ F ++DG++
Sbjct: 112 IREIIDTKVRPSVIEDGGNVVFKGYKDGIV 141
>gi|58617525|ref|YP_196724.1| hypothetical protein ERGA_CDS_07980 [Ehrlichia ruminantium str.
Gardel]
gi|58417137|emb|CAI28250.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
Length = 185
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 100/174 (57%), Gaps = 3/174 (1%)
Query: 16 EDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTK 75
ED + + F G+ G+ +F A SP K LF IE + VFFG DF++VTK
Sbjct: 6 EDTPNPNTLKFMPGIPVNNGKIGEFTDSITAESSPFAKALFEIEHIVGVFFGGDFVSVTK 65
Query: 76 QDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSD--TVIHEDDDETVQMIKELLDTR 133
D ++W +LKPEI IMDF + + D D+E V IKEL+D
Sbjct: 66 SSD-IEWDVLKPEILTVIMDFLTLNPNDSVENHDEEDLQEFFDAKDEEIVSKIKELIDDY 124
Query: 134 IRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
I+P V +DGGDI+F + G+V +K++G+C+ CPS+ +TLK G+ NML +Y+P+
Sbjct: 125 IKPAVAQDGGDIKFKGYSNGIVFVKLRGACSGCPSASITLKEGIYNMLTYYLPD 178
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKEL+D I+P V +DGGDI+F + +G++
Sbjct: 117 IKELIDDYIKPAVAQDGGDIKFKGYSNGIV 146
>gi|238881874|gb|EEQ45512.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 237
Score = 133 bits (335), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 112/188 (59%), Gaps = 6/188 (3%)
Query: 3 KELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVK 62
K L + PT + ++FIS + +L +T +F T A SPL LF+I GVK
Sbjct: 13 KRLYHFKTLPTPNPNA--LKFISPECNILPMNDKTFEFTTTLQAIHSPLALTLFKIPGVK 70
Query: 63 SVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSS-GLPVLTDAQPSSDTVIHEDDDE 121
SV GHDF+TV KQ D ++W L+P I + +F +S PV+T E++ E
Sbjct: 71 SVMLGHDFLTVNKQ-DYINWANLRPGIVEQLDEFLTSKKHPVITKELVDEAQREAEEESE 129
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQN 179
+ MIKEL++TRIRP +Q+DGGDI+ F + G V +K+QG+C SC +S TLK+G+++
Sbjct: 130 LISMIKELIETRIRPAIQDDGGDIELKGFDEETGTVFVKLQGACKSCSASEDTLKHGIES 189
Query: 180 MLQFYIPE 187
ML Y+ E
Sbjct: 190 MLMHYVEE 197
Score = 43.1 bits (100), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKEL++TRIRP +Q+DGGDI+ F EE G G CS
Sbjct: 133 MIKELIETRIRPAIQDDGGDIELKGFD----EETGTVFVKLQGACKSCS 177
>gi|296282499|ref|ZP_06860497.1| hypothetical protein CbatJ_02705 [Citromicrobium bathyomarinum
JL354]
Length = 192
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 97/163 (59%), Gaps = 10/163 (6%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P T DF + A SPL + LF V VFFG DF++VTK + W LKP+I A +
Sbjct: 24 PQGTRDFANPEDAEASPLAQALFDTGEVTGVFFGSDFVSVTK-GEGTQWTELKPQIVAVL 82
Query: 94 MDFFSSGLPVLTDAQ------PSSDTVIHEDD---DETVQMIKELLDTRIRPTVQEDGGD 144
+D F S P+ P+ DT+ E+D + V IKELL+TRIRP V DGGD
Sbjct: 83 LDHFVSEAPLFHGGSAAGIEVPAEDTLTVEEDPADADIVDQIKELLETRIRPAVAGDGGD 142
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
I + ++ GVV L++QG+C CPSS TLK+G++ +L+ Y+PE
Sbjct: 143 IAYRGYRDGVVHLQLQGACDGCPSSTATLKHGIEGLLKHYVPE 185
Score = 44.7 bits (104), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IKELL+TRIRP V DGGDI + ++DGV+
Sbjct: 124 IKELLETRIRPAVAGDGGDIAYRGYRDGVVH 154
>gi|85709112|ref|ZP_01040178.1| possible NifU-like domain protein [Erythrobacter sp. NAP1]
gi|85690646|gb|EAQ30649.1| possible NifU-like domain protein [Erythrobacter sp. NAP1]
Length = 193
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 99/174 (56%), Gaps = 11/174 (6%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G P T +F + +AA SPL + +F V +VF+G DF+TVT VDW
Sbjct: 14 LKFLPGRAVMPSGTREFASPEAAEASPLAQAIFDTGEVVNVFYGWDFVTVTAAPG-VDWS 72
Query: 84 LLKPEIFATIMDFFSSGLPVLT-------DAQPSSDTVIHED---DDETVQMIKELLDTR 133
LKP++ A ++D F S P+ P ++ ED D E + I ELL+TR
Sbjct: 73 ALKPQVHAILLDHFVSEAPLFVGGTADGISVPPEEAEMVVEDREEDAEIIASINELLETR 132
Query: 134 IRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+RP V DGGDI + F GVV L +QG+C CPSS TLK+G++++L+ Y+PE
Sbjct: 133 VRPAVAGDGGDIAYRGFSDGVVYLTLQGACAGCPSSTATLKHGIESLLKHYVPE 186
Score = 43.1 bits (100), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I ELL+TR+RP V DGGDI + F DGV+
Sbjct: 125 INELLETRVRPAVAGDGGDIAYRGFSDGVV 154
>gi|294012036|ref|YP_003545496.1| nitrogen-fixing NifU-like protein [Sphingobium japonicum UT26S]
gi|390167357|ref|ZP_10219348.1| nitrogen-fixing NifU-like protein [Sphingobium indicum B90A]
gi|292675366|dbj|BAI96884.1| nitrogen-fixing NifU-like protein [Sphingobium japonicum UT26S]
gi|389590059|gb|EIM68064.1| nitrogen-fixing NifU-like protein [Sphingobium indicum B90A]
Length = 190
Score = 133 bits (334), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 94/160 (58%), Gaps = 8/160 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF T + A SPL LF + V VFFG DFI+VT W +KP+I + +++
Sbjct: 27 TRDFATPEEAEASPLADALFGLGDVTGVFFGGDFISVTIAPG-AQWSDVKPDILSILLEH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHED-------DDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
FS+ +P+ V E+ D+E V I+EL+DTR+RP V DGGDI +
Sbjct: 86 FSANMPLFRPGSAGEIFVPQEEEFADDPEDEEIVAQIRELIDTRVRPAVANDGGDIIYRG 145
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F G V L+MQG+C+ CPSS TLKNG++ +L+ Y+PE T
Sbjct: 146 FDKGTVYLRMQGACSGCPSSTATLKNGIEQLLKHYVPEVT 185
Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+EL+DTR+RP V DGGDI + F G +
Sbjct: 122 IRELIDTRVRPAVANDGGDIIYRGFDKGTV 151
>gi|374375366|ref|ZP_09633024.1| Scaffold protein Nfu/NifU [Niabella soli DSM 19437]
gi|373232206|gb|EHP52001.1| Scaffold protein Nfu/NifU [Niabella soli DSM 19437]
Length = 198
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 101/169 (59%), Gaps = 6/169 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F L PG++IDFP +AA SPL LF +K+VF +F+T+TK D +W+
Sbjct: 22 MKFVANKLLYPGKSIDFPDVEAAKPSPLATELFGFPFIKAVFIASNFVTLTKTAD-AEWQ 80
Query: 84 LLKPEIFATIMDFFSSGLPVLTD-----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTV 138
+ P I + D+ G V+ + + S + DDD+ V+ IKELL+ ++P V
Sbjct: 81 DVTPSIRQFLKDYLEEGKIVINEDEVVTVKKESSNEVAADDDDVVKRIKELLENYVKPAV 140
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ DGG IQF S+ GVV L MQGSC+ CPSS++TLK G++ M++ IPE
Sbjct: 141 EMDGGAIQFRSYNDGVVNLMMQGSCSGCPSSMITLKAGIEGMMKRMIPE 189
Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+ ++P V+ DGG IQF S+ DGV+
Sbjct: 128 IKELLENYVKPAVEMDGGAIQFRSYNDGVV 157
>gi|315122122|ref|YP_004062611.1| nitrogen fixation protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495524|gb|ADR52123.1| nitrogen fixation protein [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 190
Score = 132 bits (333), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 96/169 (56%), Gaps = 16/169 (9%)
Query: 34 PGQ------TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQ ++ F + A SPL +F I G+ SV+ G+DFITV K D DW+ LKP
Sbjct: 18 PGQVVLVRGSVHFSNAKEAGISPLASRIFSISGIVSVYLGYDFITVAK--DKYDWEQLKP 75
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTV--------IHEDDDETVQMIKELLDTRIRPTVQ 139
I IM+ F SG P++++ + V E D VQ IK++LD R+RP V
Sbjct: 76 LILGVIMEHFMSGDPIISNGGLDAVNVNDDLGEGDFSESDSVIVQKIKDVLDNRVRPAVA 135
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
DGGDI F ++ G+V L M G+C+ CPS+ TLK GV N+L ++PE
Sbjct: 136 RDGGDIVFKGYRDGIVFLSMMGACSGCPSATETLKYGVINLLNHFVPEV 184
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK++LD R+RP V DGGDI F ++DG++
Sbjct: 122 IKDVLDNRVRPAVARDGGDIVFKGYRDGIV 151
>gi|393773293|ref|ZP_10361691.1| nitrogen-fixing NifU-like protein [Novosphingobium sp. Rr 2-17]
gi|392721173|gb|EIZ78640.1| nitrogen-fixing NifU-like protein [Novosphingobium sp. Rr 2-17]
Length = 192
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 104/174 (59%), Gaps = 12/174 (6%)
Query: 26 FQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLL 85
F+ G + P T +F + + A SPL + LF + V VFFGHDF++VT V+W L
Sbjct: 16 FRPGQIVMPAGTREFTSPEDAVASPLAEGLFDLGDVTGVFFGHDFVSVTAAPG-VEWHDL 74
Query: 86 KPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDE----------TVQMIKELLDTRIR 135
KP++ + ++D F S P+ T ++ V+ D DE V I++L++TR+R
Sbjct: 75 KPQVVSILLDHFVSQAPLFTGGD-AAGFVVPSDGDEDFGDDPADADIVAQIRDLIETRVR 133
Query: 136 PTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
P V DGGDI + F+ GVV L MQG+C CPSS TLK+G++++L+ Y+PE +
Sbjct: 134 PAVANDGGDIIYRGFREGVVYLTMQGACAGCPSSSATLKHGIESLLKHYVPEVS 187
Score = 39.7 bits (91), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I++L++TR+RP V DGGDI + F++GV+
Sbjct: 124 IRDLIETRVRPAVANDGGDIIYRGFREGVV 153
>gi|431805501|ref|YP_007232402.1| NifU-like domain-containing protein [Liberibacter crescens BT-1]
gi|430799476|gb|AGA64147.1| NifU-like domain protein [Liberibacter crescens BT-1]
Length = 190
Score = 131 bits (330), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 108/170 (63%), Gaps = 6/170 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F G + P T DF + + A SPL ++F I GV +V+ G+DFITVTKQD + +WK
Sbjct: 14 MKFIPGKIVLPRGTADFYSLEQASVSPLASIIFSINGVCAVYLGYDFITVTKQDKEYEWK 73
Query: 84 LLKPEIFATIMDFFSSGLPVLT---DAQPSSDT---VIHEDDDETVQMIKELLDTRIRPT 137
LKP I IM+ F SG PV++ D SSD+ E D V+ IK+LLD+R+RP
Sbjct: 74 HLKPAILGVIMEHFMSGNPVMSTEVDLVQSSDSESEFFDEADILIVKAIKDLLDSRVRPA 133
Query: 138 VQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V +DGGDI F ++ G V L M+GSC+ CPSS TLK+GV+ +L ++PE
Sbjct: 134 VAKDGGDITFKGYRNGTVFLSMKGSCSGCPSSSATLKHGVERLLSHFVPE 183
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+LLD+R+RP V +DGGDI F +++G +
Sbjct: 122 IKDLLDSRVRPAVAKDGGDITFKGYRNGTV 151
>gi|88608783|ref|YP_506689.1| NifU-like domain-containing protein [Neorickettsia sennetsu str.
Miyayama]
gi|88600952|gb|ABD46420.1| NifU-like domain protein [Neorickettsia sennetsu str. Miyayama]
Length = 180
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF T A L ++L+ I+GV V G DF++V+K +D +W +LKP+IF ++++
Sbjct: 27 TADFVTFSDASGHKLPEMLWEIQGVCGVMLGVDFVSVSKTED-AEWDVLKPQIFGVLVEY 85
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
F++G + +P ++ E DE + I+E++DT++RP+V EDGG+I F ++ G+V
Sbjct: 86 FTTGSDFV---RPVTEDEEVECTDEVSKKIQEIIDTKVRPSVIEDGGNIVFKGYKDGIVY 142
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK+QG+C CPS+ VTLK+G++N+LQ+YIPE
Sbjct: 143 LKLQGACAGCPSASVTLKDGIENLLQYYIPE 173
Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 26/30 (86%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+E++DT++RP+V EDGG+I F ++DG++
Sbjct: 112 IQEIIDTKVRPSVIEDGGNIVFKGYKDGIV 141
>gi|334344696|ref|YP_004553248.1| Scaffold protein Nfu/NifU [Sphingobium chlorophenolicum L-1]
gi|334101318|gb|AEG48742.1| Scaffold protein Nfu/NifU [Sphingobium chlorophenolicum L-1]
Length = 190
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/160 (42%), Positives = 92/160 (57%), Gaps = 8/160 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF T + A SPL LF + V VFFG DFI+VT W +KP+I + +++
Sbjct: 27 TRDFATPEEAEASPLADALFGLGDVTGVFFGGDFISVTIAPG-AQWSDVKPDILSILLEH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHED-------DDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
FS +P+ V E+ D E V I+EL+DTR+RP V DGGDI +
Sbjct: 86 FSVNMPLFAPGSAGDIFVPEEEEFADDPEDAEIVSQIRELIDTRVRPAVANDGGDIVYRG 145
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F G V L+MQG+C+ CPSS TLKNG++ +L+ Y+PE T
Sbjct: 146 FDKGTVYLRMQGACSGCPSSTATLKNGIEQLLKHYVPEVT 185
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+EL+DTR+RP V DGGDI + F G +
Sbjct: 122 IRELIDTRVRPAVANDGGDIVYRGFDKGTV 151
>gi|426400752|ref|YP_007019724.1| nifU-like domain-containing protein [Candidatus Endolissoclinum
patella L2]
gi|425857420|gb|AFX98456.1| nifU-like domain protein [Candidatus Endolissoclinum patella L2]
Length = 192
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 91/145 (62%), Gaps = 2/145 (1%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A SPL + ++GV +VF DFI+V+K+ D W ++KP + IM+ F + P+
Sbjct: 35 EATGSSPLAVAILGVDGVTTVFLAGDFISVSKRADK-KWYVMKPVLLGVIMEHFVTDKPI 93
Query: 104 LTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGS 162
+++ S + I +D + V IKELLD R+RP V DGGDI F ++ GVV L M G+
Sbjct: 94 ISEEISQSVNGQIKSEDQKIVSHIKELLDARVRPAVSMDGGDIIFHGYENGVVTLTMHGA 153
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPE 187
C+ CPSS TLK G++NML+ YIPE
Sbjct: 154 CSGCPSSTATLKMGIENMLRHYIPE 178
Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD R+RP V DGGDI F +++GV+
Sbjct: 117 IKELLDARVRPAVSMDGGDIIFHGYENGVV 146
>gi|269959159|ref|YP_003328948.1| NifU domain-containing protein [Anaplasma centrale str. Israel]
gi|269848990|gb|ACZ49634.1| NifU domain containing protein [Anaplasma centrale str. Israel]
Length = 188
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 92/155 (59%), Gaps = 5/155 (3%)
Query: 38 IDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFF 97
++F AA S L +LLF I+GV VFFG DFI+VTK DW L+PEI + D+
Sbjct: 29 VEFSDADAARSSALARLLFDIQGVSKVFFGGDFISVTKLPH-ADWDTLRPEILVVMTDYL 87
Query: 98 S----SGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
S P+ E D E V+ +KEL++ +RP V +DGGDI+F ++ G
Sbjct: 88 SLRGADATPLPAHEDGGEQEFFDEVDTEVVKRVKELIEHYVRPAVAQDGGDIKFRGYKEG 147
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
VV + ++G+C+ CPS+ VTLK+GV ML +Y+PE
Sbjct: 148 VVFVHLRGACSGCPSAAVTLKDGVYGMLSYYVPEV 182
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KEL++ +RP V +DGGDI+F +++GV+
Sbjct: 120 VKELIEHYVRPAVAQDGGDIKFRGYKEGVV 149
>gi|354594589|ref|ZP_09012628.1| hypothetical protein CIN_13240 [Commensalibacter intestini A911]
gi|353672265|gb|EHD13965.1| hypothetical protein CIN_13240 [Commensalibacter intestini A911]
Length = 189
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 97/155 (62%), Gaps = 4/155 (2%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
Q I+F ++A C+PL + LF IEGV+ ++FG DFI VTK D V+W LK + + IM+
Sbjct: 27 QAIEFLDRESAACAPLAQALFDIEGVQRIYFGSDFIVVTK-DLSVEWTSLKGAVISVIME 85
Query: 96 FFSSGLPVLTDAQPSSDTV---IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
F ++ SSD I +D E V IK++LD IRP V DGGDI F ++
Sbjct: 86 FILMHKAMIKMDCASSDFSEMDIAAEDQEIVNKIKDILDDEIRPAVARDGGDIIFHGYKA 145
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L+MQG+C CPSS +TLK+GV+ +L+ ++P+
Sbjct: 146 GSVYLRMQGACQGCPSSSLTLKHGVETILRRHLPD 180
>gi|149186788|ref|ZP_01865099.1| hypothetical protein ED21_29856 [Erythrobacter sp. SD-21]
gi|148829696|gb|EDL48136.1| hypothetical protein ED21_29856 [Erythrobacter sp. SD-21]
Length = 193
Score = 130 bits (327), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 94/161 (58%), Gaps = 11/161 (6%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F +AA SPL + +F V +VFFG DFITVT V W LKP++ + ++D
Sbjct: 27 TREFANPEAAEASPLAQAIFDTGEVVNVFFGGDFITVTSAPG-VSWSDLKPQVLSILLDH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHED----------DDETVQMIKELLDTRIRPTVQEDGGDIQ 146
F S P+ V ED D + V I ELL+TR+RP V DGGDIQ
Sbjct: 86 FVSEAPLFVPGTAGGIAVPAEDEALLVEENAADADIVAQINELLETRVRPAVAGDGGDIQ 145
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ F+ GVV L++QG+C+ CPSS TLK+G++ +L+ Y+PE
Sbjct: 146 YRGFKDGVVYLQLQGACSGCPSSTATLKHGIEGLLKHYVPE 186
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I ELL+TR+RP V DGGDIQ+ F+DGV+
Sbjct: 125 INELLETRVRPAVAGDGGDIQYRGFKDGVV 154
>gi|57335931|emb|CAH25367.1| nifU-like protein [Guillardia theta]
Length = 183
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 90/135 (66%), Gaps = 3/135 (2%)
Query: 64 VFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQP-SSDTVIHEDDDET 122
+F G + D W +KPE+F I+DF++SG ++T + DT ++EDD E
Sbjct: 19 IFNGSLVSNSARGKDQHSWAEMKPEVFDAILDFYASGQSIITAEEDMPQDTKVNEDDSEI 78
Query: 123 VQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNM 180
V MIKELLDTRIRP VQ+DGGDI FI F + G V +++QG+C++C SS VTLK+GV+NM
Sbjct: 79 VAMIKELLDTRIRPAVQDDGGDISFIGFDEETGRVTVRLQGACSTCSSSKVTLKSGVENM 138
Query: 181 LQFYIPETTPGLNME 195
L Y+PE T + +E
Sbjct: 139 LMHYVPEVTEVVAVE 153
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKELLDTRIRP VQ+DGGDI FI F EE G+ G + CS
Sbjct: 81 MIKELLDTRIRPAVQDDGGDISFIGFD----EETGRVTVRLQGACSTCS 125
>gi|258565761|ref|XP_002583625.1| HIRA-interacting protein 5 [Uncinocarpus reesii 1704]
gi|237907326|gb|EEP81727.1| HIRA-interacting protein 5 [Uncinocarpus reesii 1704]
Length = 316
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 97/162 (59%), Gaps = 27/162 (16%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL LF ++GV SVF+G DFIT+TK D W +KPE+F+ I + +SG ++
Sbjct: 116 HPSPLAAKLFNVDGVSSVFYGPDFITITKAGD-ASWAHIKPEVFSLITEAVTSGEQLV-- 172
Query: 107 AQPSSDTVIHEDDDE-------------------TVQMIKELLDTRIRPTVQEDGGDIQF 147
+TV +D E V MI+ELL+TRIRP +QEDGGDI+F
Sbjct: 173 -----NTVAAKDGAEPGQEGSAEEAPEYAEEDEEIVGMIQELLETRIRPAIQEDGGDIEF 227
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F+ G V LK++G+C +C SS VTLKNG+++ML YI E T
Sbjct: 228 RGFKDGNVMLKLRGACRTCDSSTVTLKNGIESMLMHYIEEVT 269
Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/29 (72%), Positives = 26/29 (89%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MI+ELL+TRIRP +QEDGGDI+F F+DG
Sbjct: 205 MIQELLETRIRPAIQEDGGDIEFRGFKDG 233
>gi|154339123|ref|XP_001562253.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062836|emb|CAM39281.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 282
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 100/163 (61%), Gaps = 7/163 (4%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
+P ++D P+ AY SPL + LF + GV+++F +++TV K D DW L I
Sbjct: 88 KPEFSMDIPSPAHAYKSPLAEALFGVAGVQAIFLADEYVTVRK-DPQADWGALVHIIKEV 146
Query: 93 IMDFFSSGLPVLTDAQPSS------DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
I++F S VL++A + DT +EDDDE V +KELL TRIRP ++ DGG+++
Sbjct: 147 IVEFAESKENVLSEAGEAELMGYNDDTEPNEDDDEVVLAVKELLATRIRPMLRADGGNVR 206
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
FI G V L ++G+C SCPSS +TLK+G++ ML +IPE
Sbjct: 207 FIDMDEGTVFLLLEGACKSCPSSHITLKSGIERMLMHWIPEVV 249
Score = 39.3 bits (90), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL TRIRP ++ DGG+++FI +G +
Sbjct: 186 VKELLATRIRPMLRADGGNVRFIDMDEGTV 215
>gi|72391004|ref|XP_845796.1| HIRA-interacting protein 5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62176423|gb|AAX70531.1| HIRA-interacting protein 5, putative [Trypanosoma brucei]
gi|70802332|gb|AAZ12237.1| HIRA-interacting protein 5, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 280
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 109/173 (63%), Gaps = 8/173 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F S + L PG+++D P Q A SPL +LLF I GV+SVF ++ITV K V
Sbjct: 74 LRFYSMELSFLP-PGRSLDLPDAQHAGKSPLAELLFSISGVQSVFLADEYITVGKVPH-V 131
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDAQPSS------DTVIHEDDDETVQMIKELLDTRI 134
DW L P+I I++F SG+ VL++ + DT +DDDE V +KELL RI
Sbjct: 132 DWGSLVPQIQECIVEFAESGVGVLSEEGEACFVDNNNDTDPEDDDDEVVLAVKELLSARI 191
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
RP ++ DGG++++IS G V + ++G+C SCPSS VTLKNG++ ML +IPE
Sbjct: 192 RPLLRADGGNVRYISMDDGTVFVLLEGACKSCPSSGVTLKNGIERMLMHWIPE 244
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL RIRP ++ DGG++++IS DG +
Sbjct: 183 VKELLSARIRPLLRADGGNVRYISMDDGTV 212
>gi|260753996|ref|YP_003226889.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|384412591|ref|YP_005621956.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|258553359|gb|ACV76305.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|335932965|gb|AEH63505.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 183
Score = 129 bits (325), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 94/148 (63%), Gaps = 1/148 (0%)
Query: 40 FPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSS 99
F + A SPL LF ++ V +VF+G DFI+VT D W L+ +I I D F +
Sbjct: 30 FVNKEEAADSPLAVALFDLQHVTAVFYGRDFISVT-LDSPSLWSNLESKIIMIISDHFDN 88
Query: 100 GLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
+P+L + ++T H+++D+ + IK+L+D+R+RP V DGGDI F F+ G+V L M
Sbjct: 89 DIPLLVENSEKNETKDHDEEDDVILQIKDLIDSRVRPAVARDGGDIVFQKFEDGIVYLSM 148
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+G+C CPSSV TLK GV+ +L+ ++PE
Sbjct: 149 RGACAGCPSSVATLKQGVETLLKHFVPE 176
Score = 43.1 bits (100), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+L+D+R+RP V DGGDI F F+DG++
Sbjct: 115 IKDLIDSRVRPAVARDGGDIVFQKFEDGIV 144
>gi|157826074|ref|YP_001493794.1| hypothetical protein A1C_05170 [Rickettsia akari str. Hartford]
gi|157800032|gb|ABV75286.1| hypothetical protein A1C_05170 [Rickettsia akari str. Hartford]
Length = 190
Score = 129 bits (324), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 97/138 (70%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKS+FFG DFITVTKQ + +W+++KPE+ IMD F +G PV ++
Sbjct: 40 SKLAESLFHINNVKSIFFGSDFITVTKQAEG-NWQIIKPEVLMIIMDHFVAGFPVFEEST 98
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+DTV H D E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C C
Sbjct: 99 -KADTVNHNIDGFSEIEKQIIEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACRGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
>gi|261329222|emb|CBH12201.1| HIRA-interacting protein 5, putative [Trypanosoma brucei gambiense
DAL972]
Length = 280
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 109/173 (63%), Gaps = 8/173 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F S + L PG+++D P Q A SPL +LLF I GV+SVF ++ITV K V
Sbjct: 74 LRFYSMELSFLP-PGRSLDLPDAQHAGKSPLAELLFSISGVQSVFLADEYITVGKVPH-V 131
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDAQPSS------DTVIHEDDDETVQMIKELLDTRI 134
DW L P+I I++F SG+ +L++ + DT +DDDE V +KELL RI
Sbjct: 132 DWGSLVPQIQECIVEFAESGVGILSEEGEACFVDNNNDTDPEDDDDEVVLAVKELLSARI 191
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
RP ++ DGG++++IS G V + ++G+C SCPSS VTLKNG++ ML +IPE
Sbjct: 192 RPLLRADGGNVRYISMDDGTVFVLLEGACKSCPSSGVTLKNGIERMLMHWIPE 244
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL RIRP ++ DGG++++IS DG +
Sbjct: 183 VKELLSARIRPLLRADGGNVRYISMDDGTV 212
>gi|402703199|ref|ZP_10851178.1| hypothetical protein RhelC_02680 [Rickettsia helvetica C9P9]
Length = 190
Score = 129 bits (324), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 95/138 (68%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L LF I VKSVFFG DFITVTKQ + +W+++KPEI IMD F SG PV +
Sbjct: 40 SKLAASLFHINNVKSVFFGSDFITVTKQAEG-NWQVIKPEILMVIMDHFVSGFPVFEE-N 97
Query: 109 PSSDTVIHEDD--DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+D V H D E + I E+++TR+RP+V +DGGDI + F+ G+VKL ++G+C C
Sbjct: 98 TKADNVNHSFDGLSEIEKQIIEIIETRVRPSVAQDGGDIIYKGFENGIVKLALRGACLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS++TLKNG+++ML+ +
Sbjct: 158 PSSIITLKNGIESMLKHF 175
>gi|397677506|ref|YP_006519044.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|395398195|gb|AFN57522.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 183
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 93/148 (62%), Gaps = 1/148 (0%)
Query: 40 FPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSS 99
F + A SPL LF ++ V +VF+G DFI+VT D W L+ +I I D F +
Sbjct: 30 FVNKEEAADSPLAVALFDLQHVTAVFYGRDFISVT-LDSPSLWSNLESKIIMIISDHFDN 88
Query: 100 GLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
+P+L + +T H+++D+ + IK+L+D+R+RP V DGGDI F F+ G+V L M
Sbjct: 89 DIPLLVENSEKDETKDHDEEDDVILQIKDLIDSRVRPAVARDGGDIVFQKFEDGIVYLSM 148
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+G+C CPSSV TLK GV+ +L+ ++PE
Sbjct: 149 RGACAGCPSSVATLKQGVETLLKHFVPE 176
Score = 43.1 bits (100), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+L+D+R+RP V DGGDI F F+DG++
Sbjct: 115 IKDLIDSRVRPAVARDGGDIVFQKFEDGIV 144
>gi|315497209|ref|YP_004086013.1| scaffold protein nfu/nifu [Asticcacaulis excentricus CB 48]
gi|315415221|gb|ADU11862.1| Scaffold protein Nfu/NifU [Asticcacaulis excentricus CB 48]
Length = 188
Score = 129 bits (323), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 98/154 (63%), Gaps = 3/154 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTK-QDDDVDWKLLKPEIFATIMD 95
+++F T A SPL LF+I+GV V+FG DF+TV + + + W +K I A IMD
Sbjct: 27 SMEFRTETDAEKSPLALSLFQIDGVSGVYFGSDFLTVKRDAEAGLIWAQIKAPILAAIMD 86
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGG 153
F++SG +L + ++ + + V IK+LLDTR+RP V +DGGDI+F F + G
Sbjct: 87 FYASGRAILNEEGAVNERTYEGEVAQIVLEIKDLLDTRVRPAVAQDGGDIEFEHFDIESG 146
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ L M+G+C+ CPSS TL+ GV+++++ Y+PE
Sbjct: 147 TLYLHMRGACSGCPSSSATLRQGVESLMKHYVPE 180
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
IK+LLDTR+RP V +DGGDI+F F
Sbjct: 117 IKDLLDTRVRPAVAQDGGDIEFEHF 141
>gi|402824159|ref|ZP_10873542.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. LH128]
gi|402262332|gb|EJU12312.1| nitrogen-fixing NifU-like protein [Sphingomonas sp. LH128]
Length = 191
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 99/161 (61%), Gaps = 9/161 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL + LF + V SVFFG FI VT V+W L+P++ A ++D
Sbjct: 27 TREFLSPEDAETSPLAQALFDLGDVVSVFFGGSFIAVTAAPG-VEWPSLRPQVVAILLDH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDD--------ETVQMIKELLDTRIRPTVQEDGGDIQFI 148
F S P+ T S +V ED+D + V IK+L+++R+RP V DGGDI +
Sbjct: 86 FVSEAPLFTGGDASGFSVPAEDEDYGDDPADADIVAQIKDLIESRVRPAVANDGGDIIYR 145
Query: 149 SFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F+ GVV L MQG+C+ CPSS TLK+G++++L+ Y+PE +
Sbjct: 146 GFREGVVYLSMQGACSGCPSSSATLKHGIESLLKHYVPEVS 186
Score = 39.7 bits (91), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+L+++R+RP V DGGDI + F++GV+
Sbjct: 123 IKDLIESRVRPAVANDGGDIIYRGFREGVV 152
>gi|383501390|ref|YP_005414749.1| NifU-like hypothetical protein [Rickettsia australis str. Cutlack]
gi|378932401|gb|AFC70906.1| NifU-like hypothetical protein [Rickettsia australis str. Cutlack]
Length = 190
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 97/138 (70%), Gaps = 4/138 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKS+FFG DFITVTKQ + +W+++KPE+ IMD F SG PV ++
Sbjct: 40 SQLAESLFHINNVKSIFFGSDFITVTKQAEG-NWQVIKPEVLMIIMDHFVSGFPVFEEST 98
Query: 109 PSSDTVIH--EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
+DTV H E E + I E+++TR+RP+V +DGGDI + F+ GVVKL ++GSC C
Sbjct: 99 -KADTVNHNLEVFSEIEKQIIEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGSCLGC 157
Query: 167 PSSVVTLKNGVQNMLQFY 184
PSS +TLKNG+++ML+ +
Sbjct: 158 PSSTITLKNGIESMLKHF 175
>gi|295673142|ref|XP_002797117.1| LiPid Depleted family member [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282489|gb|EEH38055.1| LiPid Depleted family member [Paracoccidioides sp. 'lutzii' Pb01]
Length = 317
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 86/132 (65%), Gaps = 9/132 (6%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT- 105
Y SPL L ++GV +VF+G DFIT+TK D +W +KPE+F+ I + ++G P++T
Sbjct: 126 YPSPLASKLLNVDGVSAVFYGPDFITITKAGD-ANWAHIKPEVFSLITEAVTAGDPIVTI 184
Query: 106 -------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
AQ +EDDDE V MIKELL+TRIRP +QEDGGDI+F F G+V LK
Sbjct: 185 SEAGAGSQAQEEDSLSYNEDDDEVVGMIKELLETRIRPAIQEDGGDIEFRGFDDGIVNLK 244
Query: 159 MQGSCTSCPSSV 170
++G+C +C SS
Sbjct: 245 LRGACRTCDSST 256
Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 27/31 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKELL+TRIRP +QEDGGDI+F F DG++
Sbjct: 211 MIKELLETRIRPAIQEDGGDIEFRGFDDGIV 241
>gi|182678037|ref|YP_001832183.1| scaffold protein Nfu/NifU [Beijerinckia indica subsp. indica ATCC
9039]
gi|182633920|gb|ACB94694.1| Scaffold protein Nfu/NifU [Beijerinckia indica subsp. indica ATCC
9039]
Length = 187
Score = 129 bits (323), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/156 (47%), Positives = 101/156 (64%), Gaps = 7/156 (4%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+D A SPL + LF +EGV VFFG DFI+VT+Q DW+ +KP + IM+
Sbjct: 27 TLDIREADGAKKSPLAEALFALEGVSGVFFGSDFISVTRQQG--DWQDIKPAVLGAIMEH 84
Query: 97 FSSGLPVLTDA---QPSSD--TVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
+ SG P+LTD QP +D E D TV IK+L+++ +RP V +DGGDI+F F+
Sbjct: 85 YLSGAPLLTDEADLQPQNDGEEFYAEADAHTVATIKQLIESHVRPAVAKDGGDIKFRGFR 144
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L M+GSC+ CPSS TL++GVQN+L+ Y+PE
Sbjct: 145 EGTVYLAMKGSCSGCPSSSATLRHGVQNLLKHYVPE 180
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+L+++ +RP V +DGGDI+F F++G +
Sbjct: 119 IKQLIESHVRPAVAKDGGDIKFRGFREGTV 148
>gi|347529321|ref|YP_004836069.1| nitrogen-fixing NifU-like protein [Sphingobium sp. SYK-6]
gi|345138003|dbj|BAK67612.1| nitrogen-fixing NifU-like protein [Sphingobium sp. SYK-6]
Length = 194
Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 96/173 (55%), Gaps = 18/173 (10%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PG+T+ DF A SPL + LF + V VFFG DF++VT V W L+
Sbjct: 18 PGRTVMAAGTRDFSNADEAEASPLAQALFDLGDVTGVFFGRDFVSVTAAPG-VAWSDLRT 76
Query: 88 EIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDE-----------TVQMIKELLDTRIRP 136
++ + ++D FS+ +P+ +V E+D + V I+EL+DTR+RP
Sbjct: 77 DVISILLDHFSADMPLFRGGSALGISVPPEEDQQPMPGDDPADADIVAQIRELIDTRVRP 136
Query: 137 TVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
V DGGDI + F G V L+MQG+C CPSS TLKNG++ +L+ Y+PE T
Sbjct: 137 AVANDGGDIVYRGFTRGTVYLRMQGACAGCPSSTATLKNGIEQLLKHYVPEVT 189
Score = 39.7 bits (91), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLL 55
I+EL+DTR+RP V DGGDI + F G L G P+ A + + +LL
Sbjct: 126 IRELIDTRVRPAVANDGGDIVYRGFTRGTVYLRMQGACAGCPSSTATLKNGIEQLL 181
>gi|342181842|emb|CCC91321.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 273
Score = 128 bits (322), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 109/173 (63%), Gaps = 8/173 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F S + L PG++++ P Q A+ SPL ++LF IEGV SVF ++IT+ K V
Sbjct: 68 LRFYSMELSFLP-PGRSLELPDSQHAFKSPLAEMLFGIEGVVSVFVADEYITLGKASH-V 125
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTD------AQPSSDTVIHEDDDETVQMIKELLDTRI 134
W L P I I++F SG+ VL++ A ++DT EDDDE V +KELL TRI
Sbjct: 126 GWDELVPRIRECIIEFAESGMAVLSEEGEACFADNNNDTEPEEDDDEVVLAVKELLSTRI 185
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
RP +Q DGG++++I G V + ++G+C SCPSS TLKNG++ ML +IPE
Sbjct: 186 RPLLQSDGGNVRYIDMDDGTVFVLLEGACKSCPSSGATLKNGIERMLMHWIPE 238
Score = 42.0 bits (97), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL TRIRP +Q DGG++++I DG +
Sbjct: 177 VKELLSTRIRPLLQSDGGNVRYIDMDDGTV 206
>gi|88606830|ref|YP_504700.1| NifU domain-containing protein [Anaplasma phagocytophilum HZ]
gi|88597893|gb|ABD43363.1| NifU domain protein [Anaplasma phagocytophilum HZ]
Length = 188
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 98/152 (64%), Gaps = 5/152 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFF- 97
+F + A SPL +LLF +EGV+ VFFG DF+++TK ++ + W++LKPE+ + D+
Sbjct: 30 EFLSADDAQASPLARLLFEVEGVEKVFFGGDFVSITKAEN-ILWEVLKPEVLVVMTDYCL 88
Query: 98 ---SSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
+ V A+ E D E VQ +KEL++ ++P V +DGGDI+F ++ GV
Sbjct: 89 LQGTDKEHVQASAEDEEKEFFDEKDSEIVQQVKELIENYVKPAVAQDGGDIKFRGYKEGV 148
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
V +K++G+C+ CPS+ VTLK+GV ML +YIP
Sbjct: 149 VFVKLRGACSGCPSAAVTLKDGVYGMLSYYIP 180
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KEL++ ++P V +DGGDI+F +++GV+
Sbjct: 120 VKELIENYVKPAVAQDGGDIKFRGYKEGVV 149
>gi|448514280|ref|XP_003867072.1| hypothetical protein CORT_0A12490 [Candida orthopsilosis Co 90-125]
gi|380351410|emb|CCG21634.1| hypothetical protein CORT_0A12490 [Candida orthopsilosis Co 90-125]
Length = 248
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 112/196 (57%), Gaps = 12/196 (6%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEG 60
+ + LL + T E+ ++FIS +L T +F + A SPL LF++ G
Sbjct: 15 LTRRLLHIKTASTPNENA--LKFISPDKPILPIESTTFEFTSTLQAIHSPLALQLFKLPG 72
Query: 61 VKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFF--SSGLPVLTDA-----QPSSDT 113
+KS+ G DF+TV K D+ DW L EI T+ +F PV+T+ Q
Sbjct: 73 IKSILLGPDFLTVNKLDN-YDWHDLSQEITDTMKEFLDHKDAKPVITNELVEKIQQDKQA 131
Query: 114 VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVV 171
+ ED+ E V MIKEL++TRIRP +Q+DGGDI++ F + G V LK+QG+C SC +S
Sbjct: 132 LEEEDESEIVSMIKELIETRIRPAIQDDGGDIEYKGFDEETGTVFLKLQGACKSCSASED 191
Query: 172 TLKNGVQNMLQFYIPE 187
TLK+G++ ML+ YI E
Sbjct: 192 TLKSGIEGMLKHYIEE 207
>gi|294659524|ref|XP_461916.2| DEHA2G08492p [Debaryomyces hansenii CBS767]
gi|199434030|emb|CAG90379.2| DEHA2G08492p [Debaryomyces hansenii CBS767]
Length = 240
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 105/171 (61%), Gaps = 7/171 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++FIS + +L P +T +F + A SPL LF++ GV+S+ G DF+TV KQD +
Sbjct: 31 LKFISPECQILPIPSKTFEFTSTLQAIHSPLALKLFKLHGVRSIMLGEDFLTVNKQDH-I 89
Query: 81 DWKLLKPEIFATIMDFFSSGL-PVLTDAQPSSDTVIHE---DDDETVQMIKELLDTRIRP 136
+W L+PE+ + F +S V+T E DD E V MIKEL++TRIRP
Sbjct: 90 NWAQLRPEVVDLLDGFLTSKKESVVTKELIEESEREIESSEDDSEIVSMIKELIETRIRP 149
Query: 137 TVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYI 185
+Q+DGGDI+F F + G V LK+QG+C +C SS TLKNG++ M++ YI
Sbjct: 150 AIQDDGGDIEFKGFDEETGNVFLKLQGACKTCSSSEDTLKNGIEQMMKHYI 200
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKEL++TRIRP +Q+DGGDI+F F EE G G CS
Sbjct: 138 MIKELIETRIRPAIQDDGGDIEFKGFD----EETGNVFLKLQGACKTCS 182
>gi|359397922|ref|ZP_09190947.1| nitrogen-fixing NifU-like protein [Novosphingobium
pentaromativorans US6-1]
gi|357600808|gb|EHJ62502.1| nitrogen-fixing NifU-like protein [Novosphingobium
pentaromativorans US6-1]
Length = 192
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 98/164 (59%), Gaps = 10/164 (6%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T +F + + A SPL + LF + V VFFG +FI+VT V+W LKP++ + ++
Sbjct: 25 GGTREFTSPEDAGASPLAEALFDLGDVTGVFFGQEFISVTAAPG-VEWHGLKPQVVSILL 83
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDE---------TVQMIKELLDTRIRPTVQEDGGDI 145
D F S P+ S V E D++ V IK+LL+TR+RP V DGGDI
Sbjct: 84 DHFVSEAPLFVGGDASGIAVPAEADEDFGDDPADADIVAQIKDLLETRVRPAVANDGGDI 143
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+ ++ G+V L MQG+C+ CPSS TLK+G++++L+ Y+PE +
Sbjct: 144 IYRGYREGIVYLAMQGACSGCPSSTATLKHGIESLLKHYVPEVS 187
Score = 40.0 bits (92), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+LL+TR+RP V DGGDI + +++G++
Sbjct: 124 IKDLLETRVRPAVANDGGDIIYRGYREGIV 153
>gi|341614410|ref|ZP_08701279.1| hypothetical protein CJLT1_05625 [Citromicrobium sp. JLT1363]
Length = 192
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/160 (41%), Positives = 96/160 (60%), Gaps = 10/160 (6%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF + + A SPL + LF V VFFG DF++VTK + W LKP++ A ++D
Sbjct: 27 TRDFASPEDAEASPLAQALFDTGEVTGVFFGSDFVSVTK-GEGAQWTDLKPQVVAILLDH 85
Query: 97 FSSGLPVLTDAQ------PSSDTVIHE---DDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
F S P+ P+ +T++ E D + V IK+LL+TR+RP V DGGDI F
Sbjct: 86 FVSEAPLFHGGSAAGISVPAEETMVVETDAADADIVDQIKDLLETRVRPAVAGDGGDIAF 145
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++ GVV L +QG+C CPS+ TLK+G++ +L+ Y+PE
Sbjct: 146 RGYRDGVVHLALQGACDGCPSATATLKHGIEGLLKHYVPE 185
Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IK+LL+TR+RP V DGGDI F ++DGV+
Sbjct: 124 IKDLLETRVRPAVAGDGGDIAFRGYRDGVVH 154
>gi|110636788|ref|YP_676995.1| thioredoxin-like protein [Cytophaga hutchinsonii ATCC 33406]
gi|110279469|gb|ABG57655.1| thioredoxin-related protein [Cytophaga hutchinsonii ATCC 33406]
Length = 191
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 106/170 (62%), Gaps = 5/170 (2%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++FI+ D L E G ++DFP +A PL LFR + VK VF +FITVTK + +
Sbjct: 19 LKFIT--DKTLVEEG-SVDFPMASSAESCPLVLDLFRFDFVKRVFMAANFITVTK-SEGM 74
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
+W+ + I + I + G P+ + +P S+T E + E V IK +LD IRP V+
Sbjct: 75 EWEEVSGMIKSLIKGYIEEGKPLFKETHKPLSNTAPVEGEPEVVTKIKVVLDEYIRPAVE 134
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+DGG I F SF GVVK+++QGSC+ CPSS VTLK+G++N+L+ +PE T
Sbjct: 135 QDGGAINFESFVDGVVKVQLQGSCSGCPSSTVTLKSGIENLLKRMVPEVT 184
Score = 38.9 bits (89), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IK +LD IRP V++DGG I F SF DGV++
Sbjct: 121 IKVVLDEYIRPAVEQDGGAINFESFVDGVVK 151
>gi|448117572|ref|XP_004203288.1| Piso0_000892 [Millerozyma farinosa CBS 7064]
gi|359384156|emb|CCE78860.1| Piso0_000892 [Millerozyma farinosa CBS 7064]
Length = 249
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++FIS + +L +T++F + A SPL + ++ GV+S+ G DF TV KQD +
Sbjct: 37 LKFISPECKILPIENKTLEFTSTLQAVHSPLALKIMKVPGVRSIMLGDDFFTVNKQDH-L 95
Query: 81 DWKLLKPEIFATIMDFFSSGL-PVLTD---AQPSSDTVIHEDDDETVQMIKELLDTRIRP 136
+W LKPEI +F +S PV+T + E+D E V MIKEL+ TRIRP
Sbjct: 96 NWANLKPEIVEVADEFLTSKKEPVVTKEVIESSEKEAEESENDSEVVSMIKELIATRIRP 155
Query: 137 TVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+QEDGGDI++ +F + G V LK++G+C SC +S TLKNG+++ML YI E
Sbjct: 156 AIQEDGGDIEYKAFDEETGRVFLKLRGACKSCSASEDTLKNGIESMLMHYIEEVN 210
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKEL+ TRIRP +QEDGGDI++ +F EE G+ G CS
Sbjct: 144 MIKELIATRIRPAIQEDGGDIEYKAFD----EETGRVFLKLRGACKSCS 188
>gi|357974339|ref|ZP_09138310.1| scaffold protein Nfu/NifU-like protein [Sphingomonas sp. KC8]
Length = 189
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 87/147 (59%), Gaps = 7/147 (4%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL LF + V VFFG DF++VT V+W LKP++ ++D F+SG P+
Sbjct: 39 SPLAAALFSLGDVTGVFFGRDFVSVTAAPG-VEWHGLKPQVLGVLLDHFASGAPLFAAGT 97
Query: 109 PSSDTVIHED------DDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGS 162
++ +V ++ D + V IK+L++TR+RP V DGGDI + F G V L M G+
Sbjct: 98 AAAISVPSDEFADDPADADIVAQIKDLIETRVRPAVARDGGDIVYRGFDKGTVYLAMHGA 157
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETT 189
C CPSS TLK G++ +L+ Y+PE T
Sbjct: 158 CAGCPSSTATLKQGIETLLKHYVPEVT 184
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+L++TR+RP V DGGDI + F G +
Sbjct: 121 IKDLIETRVRPAVARDGGDIVYRGFDKGTV 150
>gi|334141422|ref|YP_004534628.1| nitrogen-fixing NifU-like [Novosphingobium sp. PP1Y]
gi|333939452|emb|CCA92810.1| nitrogen-fixing NifU-like [Novosphingobium sp. PP1Y]
Length = 192
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 65/164 (39%), Positives = 98/164 (59%), Gaps = 10/164 (6%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T +F + + A SPL + LF + V VFFG +FI+VT V+W LKP++ + ++
Sbjct: 25 GGTREFTSPEDAGASPLAEALFDLGDVTGVFFGQEFISVTAAPG-VEWHGLKPQVVSILL 83
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDE---------TVQMIKELLDTRIRPTVQEDGGDI 145
D F S P+ S V E D++ V IK+L++TR+RP V DGGDI
Sbjct: 84 DHFVSEAPLFVGGDASGIAVPAEADEDFGDDPADADIVAQIKDLIETRVRPAVANDGGDI 143
Query: 146 QFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+ ++ GVV L MQG+C+ CPSS TLK+G++++L+ Y+PE +
Sbjct: 144 IYRGYREGVVYLAMQGACSGCPSSTATLKHGIESLLKHYVPEVS 187
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+L++TR+RP V DGGDI + +++GV+
Sbjct: 124 IKDLIETRVRPAVANDGGDIIYRGYREGVV 153
>gi|343084687|ref|YP_004773982.1| Scaffold protein Nfu/NifU [Cyclobacterium marinum DSM 745]
gi|342353221|gb|AEL25751.1| Scaffold protein Nfu/NifU [Cyclobacterium marinum DSM 745]
Length = 193
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 113/189 (59%), Gaps = 11/189 (5%)
Query: 5 LLDTRIRPT-----VQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIE 59
+L+ + RP + ++F++ + +L + G + DFP ++A SPL LF
Sbjct: 1 MLEAQKRPVHLYMEANPNPNSLKFVA--NFMLTDDGVSFDFPDEESAANSPLALELFNFA 58
Query: 60 GVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGL-PVLTDAQPSSDTVIHED 118
++ VF +F+TVTK+ D + W+ ++ I I F SG P+ T Q SD + E+
Sbjct: 59 AIERVFIASNFVTVTKKGD-IPWEDIQQHIRDQIKTFLESGKQPIST--QFDSDPLFDEN 115
Query: 119 DDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQ 178
D E V+ IK +LD IRP V++DGG I F SFQ GVVK+ +QG+C+ CPSS VTLK+G++
Sbjct: 116 DSEVVKKIKGILDEYIRPAVEQDGGAIVFHSFQDGVVKVLLQGACSGCPSSTVTLKSGIE 175
Query: 179 NMLQFYIPE 187
N+L +PE
Sbjct: 176 NLLTRMLPE 184
Score = 41.6 bits (96), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLEE--PGQTIDFPTGQAAYCSPLGKLLFR-I 58
IK +LD IRP V++DGG I F SFQDGV++ G P+ S + LL R +
Sbjct: 123 IKGILDEYIRPAVEQDGGAIVFHSFQDGVVKVLLQGACSGCPSSTVTLKSGIENLLTRML 182
Query: 59 EGVKSV 64
VKSV
Sbjct: 183 PEVKSV 188
>gi|338708627|ref|YP_004662828.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. pomaceae ATCC
29192]
gi|336295431|gb|AEI38538.1| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. pomaceae ATCC
29192]
Length = 182
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 2/150 (1%)
Query: 40 FPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSS 99
F + A SPL LF + V VFFG DF++VT ++ + W L+P++ + D F S
Sbjct: 30 FVNKEEAADSPLAVALFDLGPVTGVFFGQDFVSVTAENPGI-WSELEPKVIMVLSDHFES 88
Query: 100 GLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
P+ +D ED+D +Q IK+L+ TR+RP V DGGDI F F+ G+V L M
Sbjct: 89 DAPLFVKTSEKADAKQAEDNDIVIQ-IKDLIATRVRPAVARDGGDIVFQKFEDGIVYLSM 147
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+G+C+ CPSSV TLK GV+++L+ ++PE T
Sbjct: 148 RGACSGCPSSVATLKQGVESLLKHFVPEVT 177
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+L+ TR+RP V DGGDI F F+DG++
Sbjct: 114 IKDLIATRVRPAVARDGGDIVFQKFEDGIV 143
>gi|311745600|ref|ZP_07719385.1| NifU domain protein [Algoriphagus sp. PR1]
gi|126578163|gb|EAZ82383.1| NifU domain protein [Algoriphagus sp. PR1]
Length = 193
Score = 127 bits (318), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/159 (44%), Positives = 95/159 (59%), Gaps = 2/159 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
+L + G + DFP +A SPL LF V VF +F+TVTK++D V+W ++
Sbjct: 29 MLVDEGVSFDFPDAASAENSPLALELFNFSAVDRVFVASNFVTVTKKED-VEWSEVQNIF 87
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
I + SG V+ A D + E+D ETV+ IK +LD IRP V++DGG I F S
Sbjct: 88 RDHIKKYLESGQAVVK-ADFDKDPLFDENDSETVKKIKGILDEYIRPAVEQDGGAIVFHS 146
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
F GVVK+ +QGSC+ CPSS VTLK G+QN+L +PE
Sbjct: 147 FHDGVVKVLLQGSCSGCPSSTVTLKAGIQNLLTRMLPEV 185
Score = 40.0 bits (92), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IK +LD IRP V++DGG I F SF DGV++
Sbjct: 123 IKGILDEYIRPAVEQDGGAIVFHSFHDGVVK 153
>gi|390942867|ref|YP_006406628.1| thioredoxin-like protein [Belliella baltica DSM 15883]
gi|390416295|gb|AFL83873.1| thioredoxin-like protein [Belliella baltica DSM 15883]
Length = 193
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 110/189 (58%), Gaps = 11/189 (5%)
Query: 5 LLDTRIRPT-----VQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIE 59
+L T+ RPT + ++F+ + +L + G + D+P ++ SPL LF
Sbjct: 1 MLQTQKRPTTIYMEANPNPNSLKFVV--NFMLADEGVSFDYPNQESTENSPLAHELFNFA 58
Query: 60 GVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSG-LPVLTDAQPSSDTVIHED 118
V VF +F+TVTK+++ V+W L+ + I + SG PV +A D + E+
Sbjct: 59 AVDRVFIASNFVTVTKKEE-VEWLELQDIVRNHIKTYLESGKAPV--NADFDKDPLFDEN 115
Query: 119 DDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQ 178
D E V+ IK +LD IRP V++DGG I F SFQ G+VK+ +QGSC+ CPSS VTLK G+Q
Sbjct: 116 DSEVVKKIKGILDEYIRPAVEQDGGAIVFHSFQDGIVKVLLQGSCSGCPSSTVTLKAGIQ 175
Query: 179 NMLQFYIPE 187
N+L +PE
Sbjct: 176 NLLTRMLPE 184
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IK +LD IRP V++DGG I F SFQDG+++
Sbjct: 123 IKGILDEYIRPAVEQDGGAIVFHSFQDGIVK 153
>gi|283856470|ref|YP_163150.2| scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ZM4]
gi|283775474|gb|AAV90039.2| Scaffold protein Nfu/NifU [Zymomonas mobilis subsp. mobilis ZM4]
Length = 183
Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 93/148 (62%), Gaps = 1/148 (0%)
Query: 40 FPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSS 99
F + A SPL LF ++ V +VF+G DFI+VT D W L+ +I I D F +
Sbjct: 30 FVNKEEAADSPLAVALFDLQHVTAVFYGRDFISVT-LDSPSLWSNLESKIIMIISDHFDN 88
Query: 100 GLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
+P+L + ++ H+++D+ + IK+L+D+R+RP V DGGDI F F+ G+V L M
Sbjct: 89 DIPLLVENFEKNEIKDHDEEDDVILQIKDLIDSRVRPAVARDGGDIVFQKFEDGIVYLSM 148
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+G+C CPSSV TLK GV+ +L+ ++PE
Sbjct: 149 RGACAGCPSSVATLKQGVETLLKHFVPE 176
Score = 43.1 bits (100), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+L+D+R+RP V DGGDI F F+DG++
Sbjct: 115 IKDLIDSRVRPAVARDGGDIVFQKFEDGIV 144
>gi|354546943|emb|CCE43675.1| hypothetical protein CPAR2_213180 [Candida parapsilosis]
Length = 249
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 111/196 (56%), Gaps = 12/196 (6%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEG 60
+ + LL + T E+ ++FIS +L T +F + A SPL LF++ G
Sbjct: 16 LARRLLHIKTASTPNENA--LKFISPDKPILPIENTTFEFTSTLQAIHSPLALQLFKLPG 73
Query: 61 VKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFF--SSGLPVLTDA-----QPSSDT 113
+KS+ G DF+TV K D+ DW L E+ T+ F PV+T+ Q
Sbjct: 74 IKSILLGPDFLTVNKLDN-YDWHELSQEVTDTMKQFLDHKDAKPVITNELVEKIQQDKQA 132
Query: 114 VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVV 171
+ ED+ + V MIKEL++TRIRP +Q+DGGDI++ F + G V LK+QG+C SC +S
Sbjct: 133 LEDEDESDIVSMIKELIETRIRPAIQDDGGDIEYKGFDEETGTVFLKLQGACKSCSASED 192
Query: 172 TLKNGVQNMLQFYIPE 187
TLK+G++ ML+ YI E
Sbjct: 193 TLKSGIEGMLKHYIEE 208
>gi|85374519|ref|YP_458581.1| hypothetical protein ELI_08460 [Erythrobacter litoralis HTCC2594]
gi|84787602|gb|ABC63784.1| hypothetical protein ELI_08460 [Erythrobacter litoralis HTCC2594]
Length = 192
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 97/163 (59%), Gaps = 10/163 (6%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
PG T +F + + A SPL + +F V +VFFG DF++V+ DW LK + + +
Sbjct: 24 PGGTREFTSPEEAEASPLAQAIFDTGEVTNVFFGSDFVSVSAAPG-ADWSSLKGMVVSIL 82
Query: 94 MDFFSSGLPVLT--DAQ----PSSDTVIHE---DDDETVQMIKELLDTRIRPTVQEDGGD 144
+D F S P+ DA P+ D ++ E DD + V I ELL+TR+RP V DGGD
Sbjct: 83 LDHFVSQAPLFVGGDASGISVPAEDDLLVEENADDADIVAQINELLETRVRPAVAGDGGD 142
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
I + F+ GVV L +QG+C+ CPSS TLK G++ +L+ Y+PE
Sbjct: 143 IAYRGFKDGVVYLTLQGACSGCPSSTATLKQGIEGLLKHYVPE 185
Score = 43.5 bits (101), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I ELL+TR+RP V DGGDI + F+DGV+
Sbjct: 124 INELLETRVRPAVAGDGGDIAYRGFKDGVV 153
>gi|406661096|ref|ZP_11069220.1| Fe-S cluster assembly protein NifU [Cecembia lonarensis LW9]
gi|405555038|gb|EKB50088.1| Fe-S cluster assembly protein NifU [Cecembia lonarensis LW9]
Length = 193
Score = 125 bits (314), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 100/161 (62%), Gaps = 8/161 (4%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
+L + G + D+P ++ SPL K LF V+ VF +F+TVTK +++V+W ++ +
Sbjct: 29 MLADDGISFDYPNPESTENSPLAKELFNFAAVERVFIASNFVTVTK-NEEVEWPEIQDFV 87
Query: 90 FATIMDFFSSG---LPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
I + +G + V+ D P D E+D ETV+ IK +LD IRP V++DGG I
Sbjct: 88 RNHIKQYLETGKAPVNVVFDKDPLFD----ENDSETVKKIKGILDEYIRPAVEQDGGAIV 143
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F SFQ GVVK+ +QGSC+ CPSS VTLK G+QN+L +PE
Sbjct: 144 FHSFQDGVVKVLLQGSCSGCPSSTVTLKAGIQNLLTRMLPE 184
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IK +LD IRP V++DGG I F SFQDGV++
Sbjct: 123 IKGILDEYIRPAVEQDGGAIVFHSFQDGVVK 153
>gi|91205888|ref|YP_538243.1| NifU-like protein [Rickettsia bellii RML369-C]
gi|157826752|ref|YP_001495816.1| NifU-like protein [Rickettsia bellii OSU 85-389]
gi|91069432|gb|ABE05154.1| NifU-like protein [Rickettsia bellii RML369-C]
gi|157802056|gb|ABV78779.1| NifU-like protein [Rickettsia bellii OSU 85-389]
Length = 185
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 93/136 (68%), Gaps = 2/136 (1%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
S L + LF I VKS+FFG DFITVTK+ + DW+++KPE+ +MD F +G PV +
Sbjct: 39 SKLAESLFNINNVKSIFFGSDFITVTKKTES-DWQVIKPEVLMVVMDHFVAGFPVF-EVS 96
Query: 109 PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPS 168
D V E + + I E+++TR+RP+V +DGGDI + F+ GVVKL ++G+C CPS
Sbjct: 97 SKVDDVNLEGFSDIEKQIIEIIETRVRPSVAQDGGDIIYKGFENGVVKLALRGACLGCPS 156
Query: 169 SVVTLKNGVQNMLQFY 184
S +TLKNG+++ML+ +
Sbjct: 157 STITLKNGIESMLKHF 172
>gi|326386713|ref|ZP_08208334.1| nitrogen-fixing NifU-like protein [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208766|gb|EGD59562.1| nitrogen-fixing NifU-like protein [Novosphingobium nitrogenifigens
DSM 19370]
Length = 191
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 90/159 (56%), Gaps = 9/159 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF + V V FG +F++VT W KP++ A ++D
Sbjct: 27 TREFTSAEEAAISPLADALFSLGDVTGVLFGREFVSVTIAPGSA-WSDTKPQVLAVLLDH 85
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDD--------ETVQMIKELLDTRIRPTVQEDGGDIQFI 148
F S P+ A ED+D + V I +L++TRIRP V DGGDI +
Sbjct: 86 FVSQAPLFVAASAGFSVPAEEDEDFGDDPADADIVDQILDLIETRIRPAVANDGGDISYR 145
Query: 149 SFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ GVV L+MQG+C+ CPSS TLKNG++ +L+ Y+PE
Sbjct: 146 GFRDGVVYLRMQGACSGCPSSSATLKNGIEALLKHYVPE 184
Score = 41.2 bits (95), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I +L++TRIRP V DGGDI + F+DGV+
Sbjct: 123 ILDLIETRIRPAVANDGGDISYRGFRDGVV 152
>gi|421605891|ref|ZP_16047525.1| hypothetical protein BCCGELA001_42486 [Bradyrhizobium sp.
CCGE-LA001]
gi|404261999|gb|EJZ28045.1| hypothetical protein BCCGELA001_42486 [Bradyrhizobium sp.
CCGE-LA001]
Length = 136
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/131 (47%), Positives = 86/131 (65%), Gaps = 9/131 (6%)
Query: 64 VFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDT-------VIH 116
+F+G DFITVTK + W+ LKP I IM+ + SG P+L D SSD
Sbjct: 1 MFYGSDFITVTKASGE--WQQLKPAILGAIMEHYMSGAPLLADGTASSDADLDDEDEFFD 58
Query: 117 EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNG 176
E D ETV MIK+L++TR+RP V DGGDI F F+ G+V L M+G+C+ CPSS TL++G
Sbjct: 59 EADAETVDMIKDLIETRVRPAVANDGGDITFRGFKDGIVYLNMKGACSGCPSSTATLQHG 118
Query: 177 VQNMLQFYIPE 187
+QN+L+ ++P+
Sbjct: 119 IQNLLKHFVPD 129
Score = 45.8 bits (107), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIK+L++TR+RP V DGGDI F F+DG++
Sbjct: 67 MIKDLIETRVRPAVANDGGDITFRGFKDGIV 97
>gi|297182169|gb|ADI18341.1| thioredoxin-like proteins and domains [uncultured Rhodobacterales
bacterium HF4000_03E16]
Length = 146
Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 81/130 (62%), Gaps = 9/130 (6%)
Query: 34 PGQTI------DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKP 87
PGQT+ DFP+ + A SPL + LF + GV+ VFFGHDF+TVTK + +DW LKP
Sbjct: 18 PGQTVLEMGTADFPSAEGASASPLAERLFAVNGVEGVFFGHDFVTVTKA-EAMDWDHLKP 76
Query: 88 EIFATIMDFFSSGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
+ IM+ F SG PV+ A PS +D E V IKELLD+R+RP V +DGGDI
Sbjct: 77 SLLGAIMEHFQSGAPVMAGDAAGPSGHAEHSGEDGEIVSQIKELLDSRVRPAVAQDGGDI 136
Query: 146 QFISFQGGVV 155
F F+ GVV
Sbjct: 137 TFHGFERGVV 146
Score = 45.4 bits (106), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELLD+R+RP V +DGGDI F F+ GV+
Sbjct: 117 IKELLDSRVRPAVAQDGGDITFHGFERGVV 146
>gi|448120024|ref|XP_004203871.1| Piso0_000892 [Millerozyma farinosa CBS 7064]
gi|359384739|emb|CCE78274.1| Piso0_000892 [Millerozyma farinosa CBS 7064]
Length = 249
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++FIS + +L +T++F + A SPL + ++ GV+SV G DF TV K D +
Sbjct: 37 LKFISPECKILPIENKTLEFTSTLQAVHSPLALKIMKVPGVRSVMLGDDFFTVNKLDH-L 95
Query: 81 DWKLLKPEIFATIMDFFSSGL-PVLTD---AQPSSDTVIHEDDDETVQMIKELLDTRIRP 136
+W LKPEI +F +S PV+T + E+D E V MIKEL+ TRIRP
Sbjct: 96 NWANLKPEIVEVADEFLTSKKEPVVTKEVIESSEKEAEESENDSEVVSMIKELITTRIRP 155
Query: 137 TVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+Q+DGGDI++ +F + G V LK++G+C SC SS TLK+G+++ML+ YI E
Sbjct: 156 AIQDDGGDIEYKAFDEETGRVFLKLRGACKSCSSSEDTLKHGIESMLKHYIEEVN 210
Score = 45.4 bits (106), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKEL+ TRIRP +Q+DGGDI++ +F EE G+ G CS
Sbjct: 144 MIKELITTRIRPAIQDDGGDIEYKAFD----EETGRVFLKLRGACKSCS 188
>gi|395211456|ref|ZP_10399339.1| nitrogen-fixing NifU domain-containing protein [Pontibacter sp.
BAB1700]
gi|394457746|gb|EJF11858.1| nitrogen-fixing NifU domain-containing protein [Pontibacter sp.
BAB1700]
Length = 204
Score = 123 bits (308), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 99/161 (61%), Gaps = 9/161 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
GQ++D+P ++A SPL + LF + V VF +F+TVTK + ++W L PE+ +
Sbjct: 34 GQSVDYPNLESAADSPLAQELFNFDYVSRVFIASNFVTVTKAAN-IEWVKLIPELRTFLK 92
Query: 95 DFFSSGLPVLTDA----QPSSDTV----IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
+ +G P+ + +P++ T + DD + + +LL+ +RP V++DGG+I
Sbjct: 93 SYVEAGGPIFVEGFQANKPATSTESNGEVSADDAAIAKKVTDLLENYVRPAVEQDGGNIS 152
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F S++ GVV + +QGSC+ CPS+ VTLK G++N+L+ +PE
Sbjct: 153 FKSYKDGVVTVHLQGSCSGCPSATVTLKAGIENLLKRMVPE 193
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+ +LL+ +RP V++DGG+I F S++DGV+
Sbjct: 132 VTDLLENYVRPAVEQDGGNISFKSYKDGVV 161
>gi|404449274|ref|ZP_11014264.1| thioredoxin-like protein [Indibacter alkaliphilus LW1]
gi|403764962|gb|EJZ25847.1| thioredoxin-like protein [Indibacter alkaliphilus LW1]
Length = 194
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
+L + G + D+P + SPL K LF V VF +F+TVTK+ + V+W ++ +
Sbjct: 29 MLADDGISFDYPDAASTENSPLAKELFNFAAVDRVFIASNFVTVTKKAE-VEWAEIQDFL 87
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
I + SG + A D + E+D ETV+ IK +LD IRP V++DGG I F S
Sbjct: 88 RNHIKSYLESGKAAV-QANFDKDPLFDENDSETVKKIKGILDEYIRPAVEQDGGAIVFHS 146
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNME 195
F G+VK+ +QGSC+ CPSS VTLK G+QN+L +P+ + E
Sbjct: 147 FHEGIVKVLLQGSCSGCPSSTVTLKAGIQNLLTRMLPDEVKEVQAE 192
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IK +LD IRP V++DGG I F SF +G+++
Sbjct: 123 IKGILDEYIRPAVEQDGGAIVFHSFHEGIVK 153
>gi|410031183|ref|ZP_11281013.1| thioredoxin-like protein [Marinilabilia sp. AK2]
Length = 193
Score = 122 bits (307), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/161 (42%), Positives = 98/161 (60%), Gaps = 8/161 (4%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
+L + G + D+P ++ SPL K LF V+ VF +F+TVTK+++ V+W ++ +
Sbjct: 29 MLTDDGISFDYPNPESTENSPLAKELFNFAAVERVFITSNFVTVTKKEE-VEWSEIQDFV 87
Query: 90 FATIMDFFSSG---LPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
I + +G + V+ D P D E D ETV+ IK +LD IRP V++DGG I
Sbjct: 88 RNHIKQYLETGKAAVNVVFDKDPLFD----ESDSETVKKIKGILDEYIRPAVEQDGGAIV 143
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F SF G+VK+ +QGSC+ CPSS VTLK G+QN+L IPE
Sbjct: 144 FHSFHDGIVKVLLQGSCSGCPSSTVTLKAGIQNLLTRMIPE 184
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IK +LD IRP V++DGG I F SF DG+++
Sbjct: 123 IKGILDEYIRPAVEQDGGAIVFHSFHDGIVK 153
>gi|320581036|gb|EFW95258.1| hypothetical protein HPODL_3630 [Ogataea parapolymorpha DL-1]
Length = 242
Score = 122 bits (307), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 90/140 (64%), Gaps = 12/140 (8%)
Query: 59 EGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD---------AQP 109
+ +KS+ FG++FITV K + W LLKPEIF+ + + +SG V+ +
Sbjct: 75 KSIKSILFGYNFITVIKGEKH-SWSLLKPEIFSILTEHLTSGQAVINQKYINILGQQSAE 133
Query: 110 SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCP 167
+ D +ED+DE V +I ELL TRI+P +QEDGGDI+F+ F G V LK+ G+C SC
Sbjct: 134 NEDLDGYEDEDEVVALINELLITRIQPAIQEDGGDIKFVRFDEDTGTVFLKLIGACKSCS 193
Query: 168 SSVVTLKNGVQNMLQFYIPE 187
SS +TLKNG++ ML+FYI E
Sbjct: 194 SSEITLKNGIEEMLKFYIDE 213
Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
+I ELL TRI+P +QEDGGDI+F+ F +
Sbjct: 149 LINELLITRIQPAIQEDGGDIKFVRFDE 176
>gi|398016839|ref|XP_003861607.1| hypothetical protein, conserved [Leishmania donovani]
gi|322499834|emb|CBZ34907.1| hypothetical protein, conserved [Leishmania donovani]
Length = 284
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 7/161 (4%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
+P ++D P+ AY SPL + LF + GV++VF +++TV K DW L P I
Sbjct: 90 KPEFSMDIPSPAQAYKSPLAEALFGVAGVQAVFLADEYVTVRKHPQ-ADWAALIPIIKEV 148
Query: 93 IMDFFSSGLPVLTDAQP------SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
I++F S VL+ A ++DT +DDDE V +KELL TRIRP ++ DGG+++
Sbjct: 149 IVEFAESKENVLSAAGEEELLGYNNDTEPDDDDDEVVLAVKELLATRIRPMLRADGGNVR 208
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
FI G V L ++GSC SCPSS VTLK+G++ ML +IPE
Sbjct: 209 FIDMDEGTVFLLLEGSCKSCPSSHVTLKSGIERMLMHWIPE 249
Score = 39.7 bits (91), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL TRIRP ++ DGG+++FI +G +
Sbjct: 188 VKELLATRIRPMLRADGGNVRFIDMDEGTV 217
>gi|254455619|ref|ZP_05069048.1| nitrogen-fixing NifU domain protein [Candidatus Pelagibacter sp.
HTCC7211]
gi|207082621|gb|EDZ60047.1| nitrogen-fixing NifU domain protein [Candidatus Pelagibacter sp.
HTCC7211]
Length = 179
Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 91/140 (65%), Gaps = 8/140 (5%)
Query: 51 LGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD--AQ 108
L + + I GV+ +F G DFI+V K +D+++W +K + + I DF+S G + D A+
Sbjct: 40 LVRNILSINGVEGIFLGEDFISVNK-NDEINWDEIKHIVISLINDFYSDGKEFVIDEDAE 98
Query: 109 PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPS 168
S D + DE Q I ++LD +IRP V DGGDI+F F+ GVVK+++QGSC+ CPS
Sbjct: 99 QSDDNL-----DEIEQKIVKILDQKIRPAVARDGGDIKFKEFKDGVVKVQLQGSCSGCPS 153
Query: 169 SVVTLKNGVQNMLQFYIPET 188
S +TLK GVQN+L Y+PE
Sbjct: 154 STMTLKQGVQNLLCHYLPEV 173
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I ++LD +IRP V DGGDI+F F+DGV++
Sbjct: 111 IVKILDQKIRPAVARDGGDIKFKEFKDGVVK 141
>gi|340054523|emb|CCC48821.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 279
Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 107/173 (61%), Gaps = 8/173 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F S + L PG ++D P + A SPL ++LF I GVKSV+ ++ITV K DV
Sbjct: 74 LRFYSMELSFLP-PGMSLDIPDARHATKSPLAEILFGIAGVKSVYLADEYITVGK-SADV 131
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDAQPSS------DTVIHEDDDETVQMIKELLDTRI 134
DW L P + I+ F S + VL++ +S DT +DDDE V +KELL TRI
Sbjct: 132 DWGSLAPLVQEGIIQFSESKMNVLSEEGEASFVGNSNDTEPEDDDDEVVLAVKELLATRI 191
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
RP ++ DGG++++I G V + ++G+C SCPSS VTLK+G++ ML +IPE
Sbjct: 192 RPLLRADGGNVRYIDMDDGTVFVLLEGACKSCPSSSVTLKSGIERMLMHWIPE 244
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL TRIRP ++ DGG++++I DG +
Sbjct: 183 VKELLATRIRPLLRADGGNVRYIDMDDGTV 212
>gi|146089377|ref|XP_001470367.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134070400|emb|CAM68738.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 284
Score = 122 bits (305), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 7/161 (4%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
+P ++D P+ AY SPL + LF + GV++VF +++TV K DW L P I
Sbjct: 90 KPEFSMDIPSPAQAYKSPLAEALFGVAGVQAVFLADEYVTVRKHPQ-ADWAALIPIIKEV 148
Query: 93 IMDFFSSGLPVLTDAQP------SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
I++F S VL+ A ++DT +DDDE V +KELL TRIRP ++ DGG+++
Sbjct: 149 IVEFAESKENVLSAAGEEELLGYNNDTEPDDDDDEVVLAVKELLATRIRPMLRADGGNVR 208
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
FI G V L ++GSC SCPSS VTLK+G++ ML +IPE
Sbjct: 209 FIDMDEGTVFLLLEGSCKSCPSSHVTLKSGIERMLMHWIPE 249
Score = 39.7 bits (91), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL TRIRP ++ DGG+++FI +G +
Sbjct: 188 VKELLATRIRPMLRADGGNVRFIDMDEGTV 217
>gi|21430120|gb|AAM50738.1| GM32035p [Drosophila melanogaster]
Length = 104
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/63 (88%), Positives = 61/63 (96%)
Query: 125 MIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFY 184
MIKELLDTRIRPTVQEDGGDI F+ ++GGVVKLKMQGSC+SCPSS+VTLKNGVQNMLQFY
Sbjct: 2 MIKELLDTRIRPTVQEDGGDIVFMGYEGGVVKLKMQGSCSSCPSSIVTLKNGVQNMLQFY 61
Query: 185 IPE 187
IPE
Sbjct: 62 IPE 64
Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 2 MIKELLDTRIRPTVQEDGGDIVFMGYEGGVVK 33
>gi|431796891|ref|YP_007223795.1| thioredoxin-like protein [Echinicola vietnamensis DSM 17526]
gi|430787656|gb|AGA77785.1| thioredoxin-like protein [Echinicola vietnamensis DSM 17526]
Length = 194
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 98/166 (59%), Gaps = 2/166 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
+L + G + D+P ++ S L K LF V+ VF +F+TVTK +D V+W ++ I
Sbjct: 29 MLTDEGVSFDYPDEKSTENSQLAKELFNFAAVERVFIASNFVTVTK-NDGVEWPEVQDFI 87
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
I + SG P + D D + E+D E V+ IK +LD IRP V++DGG I F S
Sbjct: 88 RDHIRQYLESGKPAI-DVVLDKDPLFDENDSEVVKKIKGILDEYIRPAVEQDGGAIIFHS 146
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNME 195
FQ GVVK+ +QG+C+ CPSS VTLK G++N+L +P+ + E
Sbjct: 147 FQDGVVKVLLQGACSGCPSSTVTLKAGIENLLTRMLPDDVKTVEAE 192
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IK +LD IRP V++DGG I F SFQDGV++
Sbjct: 123 IKGILDEYIRPAVEQDGGAIIFHSFQDGVVK 153
>gi|399066129|ref|ZP_10748246.1| thioredoxin-like protein [Novosphingobium sp. AP12]
gi|398028720|gb|EJL22224.1| thioredoxin-like protein [Novosphingobium sp. AP12]
Length = 190
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 8/173 (4%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
I F G P T +F + + A SPL + LF + V VFFG +F++VT V+W
Sbjct: 14 IKFLPGRQVMPAGTREFTSPEDAAASPLAEALFDLGDVTGVFFGGEFVSVTAAPG-VEWA 72
Query: 84 LLKPEIFATIMDFFSSGLPVLTD-----AQPSSDTVIHEDDDET--VQMIKELLDTRIRP 136
L+P++ + ++D F S P+ A P+ D +D + V+ IK+L+++R+RP
Sbjct: 73 SLRPQVVSILLDHFVSEAPLFASGAAGFAVPAEDDDFGDDPADADIVEQIKDLIESRVRP 132
Query: 137 TVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
V DGGDI + F+ GVV L MQG+C+ CPSS TLK G++++L+ Y+PE +
Sbjct: 133 AVANDGGDIVYRGFREGVVYLSMQGACSGCPSSSATLKQGIESLLKHYVPEVS 185
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+L+++R+RP V DGGDI + F++GV+
Sbjct: 122 IKDLIESRVRPAVANDGGDIVYRGFREGVV 151
>gi|256419768|ref|YP_003120421.1| nitrogen-fixing NifU domain-containing protein [Chitinophaga
pinensis DSM 2588]
gi|256034676|gb|ACU58220.1| nitrogen-fixing NifU domain protein [Chitinophaga pinensis DSM
2588]
Length = 198
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/169 (37%), Positives = 96/169 (56%), Gaps = 6/169 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F L PG+ IDFP +A SPL LF ++ VF +FIT+TK D DW
Sbjct: 22 MKFVANKLLYPGKHIDFPDEASAKPSPLAVELFSFPFIRGVFIMANFITLTKTPD-TDWN 80
Query: 84 LLKPEIFATIMDFFSSGLPVLTD-----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTV 138
+ P I A + ++ PV+ + + ++ + DD + V+ IKELL+ ++P V
Sbjct: 81 DIIPTIKAFLKEYLEDNRPVINEEEIVVTKAAATNEVSADDTDVVKRIKELLENYVKPAV 140
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ DGG IQF + G V L +QGSC+ CPSS++TLK G++ M++ IPE
Sbjct: 141 EMDGGAIQFKDYDDGTVTLMLQGSCSGCPSSMITLKAGIEGMMKRMIPE 189
Score = 36.6 bits (83), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+ ++P V+ DGG IQF + DG +
Sbjct: 128 IKELLENYVKPAVEMDGGAIQFKDYDDGTV 157
>gi|146418001|ref|XP_001484967.1| hypothetical protein PGUG_02696 [Meyerozyma guilliermondii ATCC
6260]
Length = 244
Score = 120 bits (300), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 100/160 (62%), Gaps = 8/160 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T +F + A SPL LF++ GV+SV G DF+TV KQD V+W L+PE+ + +
Sbjct: 46 NKTFEFTSSLQAVHSPLALKLFKLPGVRSVMLGPDFLTVNKQDH-VNWAHLRPEVLSLLD 104
Query: 95 DFFSSGL-PVLTD----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
F + PV+T A DD E V MIKEL++TRIRP +Q+DGGDI++ +
Sbjct: 105 KFLTEKQEPVITKELIEATEKEAAEADADDLEIVSMIKELIETRIRPAIQDDGGDIEYKA 164
Query: 150 F--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F + G V LK+QG+C SC +S TLK+G+++ML+ Y+ E
Sbjct: 165 FDEETGTVFLKLQGACKSCSASEDTLKHGIESMLKHYVEE 204
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKEL++TRIRP +Q+DGGDI++ +F EE G G CS
Sbjct: 140 MIKELIETRIRPAIQDDGGDIEYKAFD----EETGTVFLKLQGACKSCS 184
>gi|87199010|ref|YP_496267.1| nitrogen-fixing NifU-like [Novosphingobium aromaticivorans DSM
12444]
gi|87134691|gb|ABD25433.1| nitrogen-fixing NifU-like protein [Novosphingobium aromaticivorans
DSM 12444]
Length = 195
Score = 119 bits (298), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 94/162 (58%), Gaps = 10/162 (6%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL + LF + V V FG DF++VT V W LKP++ + ++D
Sbjct: 30 TREFVSHEEAEASPLAQALFDLGDVTGVLFGRDFVSVTAAPG-VAWADLKPQVLSLLLDH 88
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQM---------IKELLDTRIRPTVQEDGGDIQF 147
F + P+ V + D++ IK+L++TR+RP V DGGDI +
Sbjct: 89 FVAQAPLFAPGSAGGIVVPADADEDFADDPADADIIDQIKDLIETRVRPAVANDGGDIIY 148
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F+ GVV LKMQG+C+ CPSS TLKNG++++L+ Y+PE +
Sbjct: 149 RGFREGVVYLKMQGACSGCPSSTATLKNGIESLLKHYVPEVS 190
Score = 40.8 bits (94), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK+L++TR+RP V DGGDI + F++GV+
Sbjct: 127 IKDLIETRVRPAVANDGGDIIYRGFREGVV 156
>gi|190346499|gb|EDK38598.2| hypothetical protein PGUG_02696 [Meyerozyma guilliermondii ATCC
6260]
Length = 244
Score = 119 bits (297), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 100/160 (62%), Gaps = 8/160 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+T +F + A SPL LF++ GV+SV G DF+TV KQD V+W L+PE+ + +
Sbjct: 46 NKTFEFTSSLQAVHSPLALKLFKLPGVRSVMLGPDFLTVNKQDH-VNWAHLRPEVSSLLD 104
Query: 95 DFFSSGL-PVLTD----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
F + PV+T A DD E V MIKEL++TRIRP +Q+DGGDI++ +
Sbjct: 105 KFLTEKQEPVITKELIEATEKEAAEADADDSEIVSMIKELIETRIRPAIQDDGGDIEYKA 164
Query: 150 F--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F + G V LK+QG+C SC +S TLK+G+++ML+ Y+ E
Sbjct: 165 FDEETGTVFLKLQGACKSCSASEDTLKHGIESMLKHYVEE 204
Score = 45.4 bits (106), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
MIKEL++TRIRP +Q+DGGDI++ +F EE G G CS
Sbjct: 140 MIKELIETRIRPAIQDDGGDIEYKAFD----EETGTVFLKLQGACKSCS 184
>gi|401423674|ref|XP_003876323.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492565|emb|CBZ27842.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 281
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/173 (42%), Positives = 105/173 (60%), Gaps = 8/173 (4%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
I+F S L+ P ++D P+ AY SPL + LF + GV++VF +++TV K +
Sbjct: 76 IRFFSMDISFLK-PEFSVDIPSPAQAYKSPLAEALFGVAGVQAVFLADEYVTVRKHPQE- 133
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDAQP------SSDTVIHEDDDETVQMIKELLDTRI 134
DW L P I I++F S VL+ A ++DT EDDDE V +KELL TRI
Sbjct: 134 DWAALMPIIKEVIVEFAESKENVLSAAGEEELLGYNNDTEPDEDDDEVVLAVKELLATRI 193
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
RP ++ DGG+++FI G V L ++G+C SCPSS +TLK+G++ ML +IPE
Sbjct: 194 RPMLRADGGNVRFIDMDEGTVFLLLEGACKSCPSSHITLKSGIERMLMHWIPE 246
Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL TRIRP ++ DGG+++FI +G +
Sbjct: 185 VKELLATRIRPMLRADGGNVRFIDMDEGTV 214
>gi|320584117|gb|EFW98328.1| hypothetical protein HPODL_0008 [Ogataea parapolymorpha DL-1]
Length = 250
Score = 118 bits (296), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/161 (44%), Positives = 95/161 (59%), Gaps = 14/161 (8%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDD------DVDWKLLKPEIFAT 92
D P +A+ SPL LF++ GVKS+ GH+FITV K D D+ W L ++
Sbjct: 59 DLP--EASQRSPLASELFKLNGVKSLLIGHNFITVNKVDPELSNNPDLHWDSLSTKVMNV 116
Query: 93 IMDFFSSGLPVLT----DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
I + S +PVL D EDDD+ IKEL++TRIRP +Q+DGGDI F
Sbjct: 117 ITNAVDSNIPVLNPEYLDEIVRKQDEAQEDDDDVTYEIKELINTRIRPALQDDGGDIHFR 176
Query: 149 SF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
SF + G V LK+QG+C SC S TLKNG+++ML+ YIPE
Sbjct: 177 SFDAESGTVYLKLQGACKSCSLSEDTLKNGIESMLKHYIPE 217
Score = 43.5 bits (101), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/25 (72%), Positives = 22/25 (88%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
IKEL++TRIRP +Q+DGGDI F SF
Sbjct: 154 IKELINTRIRPALQDDGGDIHFRSF 178
>gi|440747535|ref|ZP_20926792.1| nifU domain protein [Mariniradius saccharolyticus AK6]
gi|436484005|gb|ELP40025.1| nifU domain protein [Mariniradius saccharolyticus AK6]
Length = 181
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 93/160 (58%), Gaps = 2/160 (1%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
+L + G + D+P + SPL LF V+ VF +F+TVTK+ V+W ++ I
Sbjct: 17 MLTDEGISFDYPDQASTENSPLAHELFNFSAVERVFITSNFVTVTKKTS-VEWPEIQDFI 75
Query: 90 FATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
I + +G + D + E+D ETV+ IK +LD IRP V++DGG I F S
Sbjct: 76 RDHIKKYLEAGKAAV-QVTFDKDPLFDENDSETVKKIKGILDEYIRPAVEQDGGAIVFHS 134
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F G+VK+ +QGSC+ CPSS VTLK G+QN+L +PE +
Sbjct: 135 FHDGIVKVLLQGSCSGCPSSTVTLKAGIQNLLTRMVPEVS 174
Score = 39.3 bits (90), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IK +LD IRP V++DGG I F SF DG+++
Sbjct: 111 IKGILDEYIRPAVEQDGGAIVFHSFHDGIVK 141
>gi|395731732|ref|XP_003775956.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like, partial [Pongo abelii]
Length = 131
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/126 (50%), Positives = 84/126 (66%), Gaps = 9/126 (7%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT 105
+Y + LFR+EGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMDFF+SGLP++T
Sbjct: 5 SYFFFFCRQLFRVEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMDFFASGLPLVT 64
Query: 106 DAQPSSDTVIHEDDDETVQMIKELLDTRIR------PTVQEDGGDIQF--ISFQGGVVKL 157
+ PS + E+DDE V MIKELLDTRIR P + GG + I G + +
Sbjct: 65 EETPSGEAG-SEEDDEVVAMIKELLDTRIRYVLLSLPKFKCFGGIFHYSNIVLVGREIIV 123
Query: 158 KMQGSC 163
Q C
Sbjct: 124 DFQNKC 129
>gi|124006329|ref|ZP_01691163.1| NifU domain protein [Microscilla marina ATCC 23134]
gi|123987986|gb|EAY27657.1| NifU domain protein [Microscilla marina ATCC 23134]
Length = 197
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/155 (40%), Positives = 95/155 (61%), Gaps = 3/155 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
G T DFP + A SPL LF + V VF +F+TVTK+++ DW + E+ +
Sbjct: 34 GTTFDFPDAETAQQSPLATELFSKFSYVDRVFMMSNFVTVTKKEE-ADWHDVAGEVKEFL 92
Query: 94 MDFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
+ P+LT D Q D +++D+ E + IK +L+ +RP V+ DGG I F S++
Sbjct: 93 QGYLEEQKPLLTQDIQDEYDKELNKDEPEIDRKIKGILEEYVRPAVESDGGAINFHSYEN 152
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G VK+ +QGSC+ CPSS+VTLK+G++N+L+ +PE
Sbjct: 153 GTVKVLLQGSCSGCPSSMVTLKSGIENLLKRMLPE 187
>gi|436838565|ref|YP_007323781.1| nitrogen-fixing NifU domain protein [Fibrella aestuarina BUZ 2]
gi|384069978|emb|CCH03188.1| nitrogen-fixing NifU domain protein [Fibrella aestuarina BUZ 2]
Length = 200
Score = 116 bits (291), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/140 (43%), Positives = 85/140 (60%), Gaps = 3/140 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL LF ++GV+ VF +FIT+TK D+DVDW + E+ + D+F + PV
Sbjct: 52 SPLAVALFGVDGVRRVFIAGNFITLTK-DEDVDWGEILFEVKVFLKDYFEADKPVFVQRT 110
Query: 109 PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSC 166
++ E D ETVQ IK LD +RP V+ DGG I F +F G VK+ +QGSC+ C
Sbjct: 111 MELNSTRLEADSETVQQIKAALDQYVRPAVESDGGAINFHAFDEATGTVKVLLQGSCSGC 170
Query: 167 PSSVVTLKNGVQNMLQFYIP 186
PSS +TLK G++N+L +P
Sbjct: 171 PSSTLTLKAGIENLLTRLVP 190
>gi|406706902|ref|YP_006757255.1| NifU family protein,scaffold protein, Nfu/NifU family [alpha
proteobacterium HIMB5]
gi|406652678|gb|AFS48078.1| NifU family protein,scaffold protein, Nfu/NifU family [alpha
proteobacterium HIMB5]
Length = 179
Score = 116 bits (290), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Query: 42 TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGL 101
T + + L + L I GV+ VF G DFI+V K+D+ ++W+ +K + + I DF+S G
Sbjct: 31 TKKGNINNDLIRNLLSINGVEGVFLGEDFISVNKKDN-INWEEIKHIVISFINDFYSDGK 89
Query: 102 PVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQG 161
+ D + E + I ++LD +IRP V +DGGDI+F F+ G+V++++QG
Sbjct: 90 EFVIDKNLDEKI---SNFSEIEKNIIKILDQKIRPAVAKDGGDIKFKEFKDGIVRVQLQG 146
Query: 162 SCTSCPSSVVTLKNGVQNMLQFYIPET 188
SC+ CPSS +TLK GVQN+L+ YI E
Sbjct: 147 SCSGCPSSTMTLKQGVQNLLKHYIKEV 173
Score = 40.0 bits (92), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 24/30 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I ++LD +IRP V +DGGDI+F F+DG++
Sbjct: 111 IIKILDQKIRPAVAKDGGDIKFKEFKDGIV 140
>gi|401403705|ref|XP_003881543.1| Nitrogen-fixing NifU, C-terminal, related [Neospora caninum
Liverpool]
gi|325115956|emb|CBZ51510.1| Nitrogen-fixing NifU, C-terminal, related [Neospora caninum
Liverpool]
Length = 191
Score = 115 bits (288), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 94/166 (56%), Gaps = 16/166 (9%)
Query: 38 IDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFF 97
ID + +A SPL LF+I+G SV D++TV K D DW L+ + +I+D
Sbjct: 9 IDVLSVRAEGASPLADCLFKIDGTSSVLIAGDYVTVVKAKD-TDWGDLEEPVKRSILDHL 67
Query: 98 SSGLPVLTDAQPSSDTVIHE-------------DDDETVQMIKELLDTRIRPTVQEDGGD 144
SGLP + S + + E ++++ + I+ELL R RP +Q DGGD
Sbjct: 68 MSGLPAIQPVASSEEISVPEGRRQEPQQQSKPDEEEDLSEAIRELLHMRARPMLQADGGD 127
Query: 145 IQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
++ + F + G+V + ++GSC CPSS++T+K G++ MLQ+YIPE
Sbjct: 128 LEMMRFDEETGIVWVHLKGSCEGCPSSLITVKRGMKQMLQYYIPEV 173
>gi|349805575|gb|AEQ18260.1| putative nfu1 iron-sulfur cluster protein [Hymenochirus curtipes]
Length = 79
Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/65 (78%), Positives = 60/65 (92%)
Query: 123 VQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
V MIKELL+TRIRPTVQEDGGD+ F FQ G+V+LK+QGSCT+CPSS++TLKNG+QNMLQ
Sbjct: 1 VAMIKELLETRIRPTVQEDGGDVLFRGFQDGIVQLKLQGSCTTCPSSIITLKNGIQNMLQ 60
Query: 183 FYIPE 187
FYIPE
Sbjct: 61 FYIPE 65
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELL+TRIRPTVQEDGGD+ F FQDG+++
Sbjct: 3 MIKELLETRIRPTVQEDGGDVLFRGFQDGIVQ 34
>gi|71083083|ref|YP_265802.1| NifU-like domain-containing protein [Candidatus Pelagibacter ubique
HTCC1062]
gi|91762490|ref|ZP_01264455.1| NifU-like domain protein [Candidatus Pelagibacter ubique HTCC1002]
gi|71062196|gb|AAZ21199.1| NifU-like domain protein [Candidatus Pelagibacter ubique HTCC1062]
gi|91718292|gb|EAS84942.1| NifU-like domain protein [Candidatus Pelagibacter ubique HTCC1002]
Length = 180
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 90/139 (64%), Gaps = 3/139 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
+ L + + I GV VF G DFI++ K +++V+W+ +K + I DF+S+G + +
Sbjct: 38 NELVRNILSINGVTGVFLGEDFISINK-NEEVNWEDIKHIAISLINDFYSTGKEFVIANE 96
Query: 109 PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPS 168
+ E+ E + I +L+++IRP V +DGGDI+F F+ G+VK+++QGSC+ CPS
Sbjct: 97 LLGEK--KEEHTEIEKQIISILESKIRPAVAKDGGDIKFKEFKDGIVKVELQGSCSGCPS 154
Query: 169 SVVTLKNGVQNMLQFYIPE 187
S +TLK GVQN+L Y+PE
Sbjct: 155 STMTLKQGVQNLLCHYLPE 173
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 24/28 (85%)
Query: 5 LLDTRIRPTVQEDGGDIQFISFQDGVLE 32
+L+++IRP V +DGGDI+F F+DG+++
Sbjct: 115 ILESKIRPAVAKDGGDIKFKEFKDGIVK 142
>gi|254566217|ref|XP_002490219.1| Protein involved in iron metabolism in mitochondria [Komagataella
pastoris GS115]
gi|238030015|emb|CAY67938.1| Protein involved in iron metabolism in mitochondria [Komagataella
pastoris GS115]
gi|328350616|emb|CCA37016.1| NifU-like protein 5, mitochondrial [Komagataella pastoris CBS 7435]
Length = 257
Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 92/168 (54%), Gaps = 23/168 (13%)
Query: 43 GQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQD------DDVDWKLLKPEIFATIMDF 96
A SPL LF++ GVKS+ G DFITV K D D W+ LKP+I I
Sbjct: 58 ASATEKSPLALQLFKVPGVKSILIGDDFITVNKVDEKLSNSDHSRWQFLKPQIINVIDRS 117
Query: 97 FSSG----LPVLTDAQPSSDTVIHEDD-----------DETVQMIKELLDTRIRPTVQED 141
S + VLT + + +H DD D+ IKEL++TRIRP +Q+D
Sbjct: 118 LSKSSEKKVNVLTPQFLENISNVHHDDYIVSQEPLDTDDDVTYEIKELINTRIRPAIQDD 177
Query: 142 GGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GGD+QF F G+V +K++G+C SC S TLK+G+++MLQ Y+ E
Sbjct: 178 GGDVQFRRFDPDAGIVYIKLKGACKSCSLSEDTLKHGIESMLQHYVEE 225
Score = 43.1 bits (100), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 22/25 (88%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
IKEL++TRIRP +Q+DGGD+QF F
Sbjct: 162 IKELINTRIRPAIQDDGGDVQFRRF 186
>gi|157870953|ref|XP_001684026.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127094|emb|CAJ04535.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 240
Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 98/163 (60%), Gaps = 7/163 (4%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
+P ++D + AY SPL + LF + GV++VF +++TV K DW L P I
Sbjct: 46 KPEFSMDITSPAQAYKSPLAEALFGVAGVQAVFLADEYVTVRKHPQ-ADWAALIPIIKEV 104
Query: 93 IMDFFSSGLPVLTDAQP------SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
I++F S VL+ A ++DT EDDDE V +KELL TRIRP ++ DGG+++
Sbjct: 105 IVEFAESKENVLSAAGEEELLGYNNDTEPDEDDDEVVLAVKELLATRIRPMLRADGGNVR 164
Query: 147 FISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
FI G V L ++GSC SCPSS +TLK+G++ ML +IPE
Sbjct: 165 FIDMDEGTVFLLLEGSCKSCPSSHITLKSGIERMLMHWIPEVV 207
Score = 39.7 bits (91), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL TRIRP ++ DGG+++FI +G +
Sbjct: 144 VKELLATRIRPMLRADGGNVRFIDMDEGTV 173
>gi|284037367|ref|YP_003387297.1| nitrogen-fixing NifU domain-containing protein [Spirosoma linguale
DSM 74]
gi|283816660|gb|ADB38498.1| nitrogen-fixing NifU domain protein [Spirosoma linguale DSM 74]
Length = 200
Score = 113 bits (282), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 85/142 (59%), Gaps = 3/142 (2%)
Query: 48 CSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
SPL LF E V+ VF +F+TVTK DD+ DW + E+ + D+F PV +
Sbjct: 51 ASPLAVALFGFEFVRRVFISANFVTVTK-DDETDWDEVLLEVKLFLKDYFGEQKPVFSQR 109
Query: 108 QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKLKMQGSCTS 165
++T + D ETVQ IK +L+ I+P V+ DGG I F SF G VK+ +QGSC+
Sbjct: 110 TVDTNTTKLDMDSETVQKIKAVLEQYIKPAVESDGGAISFYSFDEPSGTVKVLLQGSCSG 169
Query: 166 CPSSVVTLKNGVQNMLQFYIPE 187
CPSS +TLK G++N+L +PE
Sbjct: 170 CPSSTLTLKAGIENLLTRLVPE 191
>gi|159163237|pdb|1VEH|A Chain A, Solution Structure Of Rsgi Ruh-018, A Nifu-Like Domain Of
Hirip5 Protein From Mouse Cdna
Length = 92
Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/65 (76%), Positives = 60/65 (92%)
Query: 123 VQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
V MIKELLDTRIRPTVQEDGGD+ + F+ G+V+LK+QGSCTSCPSS++TLK+G+QNMLQ
Sbjct: 15 VAMIKELLDTRIRPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQ 74
Query: 183 FYIPE 187
FYIPE
Sbjct: 75 FYIPE 79
Score = 53.1 bits (126), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 17 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIVR 48
>gi|296448206|ref|ZP_06890103.1| Scaffold protein Nfu/NifU [Methylosinus trichosporium OB3b]
gi|296254290|gb|EFH01420.1| Scaffold protein Nfu/NifU [Methylosinus trichosporium OB3b]
Length = 183
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 86/131 (65%), Gaps = 3/131 (2%)
Query: 58 IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD-AQPSSDTVIH 116
I GV++V FG DF++VTK D +W LKP + TIM+ F+SG P++ D + +
Sbjct: 48 INGVEAVMFGPDFVSVTKA--DAEWAHLKPAVLGTIMEHFTSGAPIVLDEGEAAPAEFFD 105
Query: 117 EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNG 176
D E V +KELL TR+ P V DGGDI F F+ G+V L M+GSC+ CPSS TLKNG
Sbjct: 106 PADAELVATLKELLVTRVTPAVARDGGDIAFRGFRDGIVYLAMKGSCSGCPSSSATLKNG 165
Query: 177 VQNMLQFYIPE 187
V+N+L+ Y+P+
Sbjct: 166 VENLLRHYVPQ 176
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
+KELL TR+ P V DGGDI F F+DG++
Sbjct: 115 LKELLVTRVTPAVARDGGDIAFRGFRDGIV 144
>gi|255038627|ref|YP_003089248.1| nitrogen-fixing NifU domain-containing protein [Dyadobacter
fermentans DSM 18053]
gi|254951383|gb|ACT96083.1| nitrogen-fixing NifU domain protein [Dyadobacter fermentans DSM
18053]
Length = 198
Score = 111 bits (278), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/160 (40%), Positives = 92/160 (57%), Gaps = 8/160 (5%)
Query: 35 GQTIDFPTGQAAY----CSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIF 90
G + D+P+ +AA SPL LF+ VK VF +FIT+TK DD+ W+ + +
Sbjct: 31 GLSFDYPSLEAALEEGKASPLAADLFQFPHVKRVFIASNFITITK-GDDIAWEEVLRDTK 89
Query: 91 ATIMDFFSSGLPVLTDAQPSSDT-VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
I +F PV ++T ++ D +TVQ IK LD +RP V+ DGG I F S
Sbjct: 90 QFIKIYFEENHPVFEQKTIDTNTLIVDARDSDTVQKIKAALDQYVRPAVESDGGAINFHS 149
Query: 150 FQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F GVVK+ +QGSC+ CPSS +TLK G++N+L +P+
Sbjct: 150 FDEGSGVVKVLLQGSCSGCPSSTLTLKAGIENLLTRMVPD 189
>gi|375149493|ref|YP_005011934.1| Scaffold protein Nfu/NifU [Niastella koreensis GR20-10]
gi|361063539|gb|AEW02531.1| Scaffold protein Nfu/NifU [Niastella koreensis GR20-10]
Length = 198
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/169 (38%), Positives = 100/169 (59%), Gaps = 6/169 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F L PG++IDFP + A SPL LF +++VF +F+T+TK + DW
Sbjct: 22 MKFVANKLLYPGKSIDFPDLENAKPSPLATELFGFPFIRAVFIASNFVTLTKTVE-TDWN 80
Query: 84 LLKPEIFATIMDFFSSGLPVLTD-----AQPSSDTVIHEDDDETVQMIKELLDTRIRPTV 138
+ P I + ++ G V+ + + S V+ DDD+ V+ IKELL+ ++P V
Sbjct: 81 DVIPTIRQFLKEYLEEGKVVINEDEIATVKQESTNVVAADDDDVVKRIKELLENYVKPAV 140
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ DGG IQF S+ G+V L +QGSC+ CPSS++TLK G++ M++ IPE
Sbjct: 141 EMDGGAIQFKSYNDGIVNLMLQGSCSGCPSSMITLKAGIEGMMKRMIPE 189
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IKELL+ ++P V+ DGG IQF S+ DG++
Sbjct: 128 IKELLENYVKPAVEMDGGAIQFKSYNDGIV 157
>gi|409099802|ref|ZP_11219826.1| nitrogen-fixing NifU domain-containing protein [Pedobacter agri
PB92]
Length = 183
Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/152 (38%), Positives = 91/152 (59%), Gaps = 6/152 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DF T ++A SP K LF+ V VFF +F+T+TK DD DW +I A + +F
Sbjct: 30 DFATKESAEHSPFAKELFKFNFVSGVFFASNFVTITKTDD-ADW----ADIEAILKEFVK 84
Query: 99 SGLPV-LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKL 157
+ L + +++ + ET I+++L +RP V++DGG I + SF GVV +
Sbjct: 85 GAVESELKIKEATAEEAPAFEGSETEIKIQQILHDYVRPAVEQDGGAITYKSFDEGVVTV 144
Query: 158 KMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+++GSC+ CPSS +TLK+G+QN+LQ +PE T
Sbjct: 145 ELRGSCSGCPSSTITLKSGIQNLLQRMVPEVT 176
>gi|294936237|ref|XP_002781672.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239892594|gb|EER13467.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 262
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 87/152 (57%), Gaps = 9/152 (5%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL LFRI GV V TVTK + +W++LKP + I FF +P +
Sbjct: 70 SPLAASLFRIHGVDKVLLAARHATVTK-SPETEWEMLKPNVELVISQFFD--IPNVKPVA 126
Query: 109 PSSDTVIHE----DDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG--GVVKLKMQGS 162
P + E +D+ V+ I E+L+ RI+P V+ DGGD++FI+F GV+++++ GS
Sbjct: 127 PDTIEYTQEGQDQHNDDVVKSIHEILEQRIKPFVERDGGDVEFIAFDSDTGVLQIRLVGS 186
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETTPGLNM 194
C CP S VTLK G+Q M+ YIPE +N+
Sbjct: 187 CAGCPKSSVTLKFGIQRMVCHYIPEVKNVINI 218
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD--GVLE 32
I E+L+ RI+P V+ DGGD++FI+F GVL+
Sbjct: 148 IHEILEQRIKPFVERDGGDVEFIAFDSDTGVLQ 180
>gi|392967234|ref|ZP_10332652.1| nitrogen-fixing NifU domain protein [Fibrisoma limi BUZ 3]
gi|387844031|emb|CCH54700.1| nitrogen-fixing NifU domain protein [Fibrisoma limi BUZ 3]
Length = 200
Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 48 CSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
SPL LF E V+ VF +FITVTK DD DW + E+ + +F PV
Sbjct: 51 ASPLAVALFGFEFVRRVFIAGNFITVTK-DDATDWDDVLFEVKFFLKQYFEEKKPVFAQR 109
Query: 108 QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKLKMQGSCTS 165
++T E D ETVQ IK +LD +RP V+ DGG I F SF G VK+ +QGSC+
Sbjct: 110 TMDANTTRVEVDSETVQKIKAVLDQYVRPAVESDGGAINFHSFDEPTGTVKVLLQGSCSG 169
Query: 166 CPSSVVTLKNGVQNMLQFYIPE 187
CPSS +TLK G++N+L +P+
Sbjct: 170 CPSSTLTLKAGIENLLTRLVPD 191
>gi|115376684|ref|ZP_01463912.1| NifU domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310823922|ref|YP_003956280.1| NIF system FeS cluster assembly, NifU family protein [Stigmatella
aurantiaca DW4/3-1]
gi|115366301|gb|EAU65308.1| NifU domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309396994|gb|ADO74453.1| NIF system FeS cluster assembly, NifU family protein [Stigmatella
aurantiaca DW4/3-1]
Length = 187
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 86/147 (58%), Gaps = 2/147 (1%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A SPL + L I+GV +V G +F+TVTK D+ +W L + +T+ S PV
Sbjct: 37 EAEQKSPLARKLMDIQGVTAVMLGLNFVTVTKGDEG-EWDELNDAVMSTLDAHLGSDEPV 95
Query: 104 LTDAQPSSDTVIHEDDDETV-QMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGS 162
+ +A ++ + +V Q I+E+LD IRP V +DGGDI ++ GVV L MQGS
Sbjct: 96 VDEAAVAAARAAPAEGGSSVEQRIREILDAEIRPAVAQDGGDITLDRYENGVVYLHMQGS 155
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETT 189
C+ CPSS TLK G++ L+ IPE T
Sbjct: 156 CSGCPSSTATLKMGIEGRLREAIPEVT 182
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+E+LD IRP V +DGGDI +++GV+
Sbjct: 119 IREILDAEIRPAVAQDGGDITLDRYENGVV 148
>gi|294877892|ref|XP_002768179.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239870376|gb|EER00897.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 177
Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 88/156 (56%), Gaps = 15/156 (9%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL LFRI GV V TVTK + DW++L+P + + FF + + +
Sbjct: 11 SPLAASLFRIHGVDKVLLAARHATVTK-SPETDWEMLQPNVELVMSQFFE-----IPNVK 64
Query: 109 PSSDTVIH-------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG--GVVKLKM 159
P S I + +DE V+ I E+L+ RI+P V+ DGGD++F+SF G +++++
Sbjct: 65 PVSPEAIEYTPEGQDQHNDEVVKSIHEILEQRIKPFVERDGGDVEFVSFDADSGELEIRL 124
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNME 195
GSC+ CP S VTLK G+Q M+ YIPE N+E
Sbjct: 125 VGSCSGCPKSSVTLKFGIQRMVCHYIPEVKNVTNIE 160
Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
I E+L+ RI+P V+ DGGD++F+SF
Sbjct: 89 IHEILEQRIKPFVERDGGDVEFVSF 113
>gi|373956925|ref|ZP_09616885.1| Scaffold protein Nfu/NifU [Mucilaginibacter paludis DSM 18603]
gi|373893525|gb|EHQ29422.1| Scaffold protein Nfu/NifU [Mucilaginibacter paludis DSM 18603]
Length = 182
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 92/153 (60%), Gaps = 5/153 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
++D+ T ++A SP K LF+ V VFF +F+TVTK + DW L+P + +
Sbjct: 28 SVDYATRESAEKSPFAKELFKFSFVNGVFFASNFVTVTKTEGS-DWNDLEPILKEFVKGA 86
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
S L V Q + V E D ++ I+++L +RP V++DGG I + SF GVV
Sbjct: 87 VESELLVQIKEQ---EEVAFEGTDAEIK-IQQILQDYVRPAVEQDGGAITYKSFNEGVVT 142
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
++++GSC+ CPSS +TLK+G++N+L+ +PE T
Sbjct: 143 VELRGSCSGCPSSTITLKSGIENLLKRMVPEVT 175
>gi|255532822|ref|YP_003093194.1| nitrogen-fixing NifU domain-containing protein [Pedobacter
heparinus DSM 2366]
gi|255345806|gb|ACU05132.1| nitrogen-fixing NifU domain protein [Pedobacter heparinus DSM 2366]
Length = 183
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DF T ++A SP K LF+ V VFF +F+TVTK +D +W ++P + +
Sbjct: 30 DFATKESAEHSPFAKELFKFSFVNGVFFASNFVTVTKTED-AEWADIEPILKEFVKGAVE 88
Query: 99 SGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
S + D S++ E D ++ I+++L +RP V++DGG I + SF GVV ++
Sbjct: 89 SEYKIKEDT--SAEAPAFEGSDLEIK-IQQILHDYVRPAVEQDGGAISYKSFDDGVVTVE 145
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++GSC+ CPSS +TLK+G+QN+LQ +PE
Sbjct: 146 LRGSCSGCPSSTITLKSGIQNLLQRMVPE 174
Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQAAYCSPLGKLLFRI 58
I+++L +RP V++DGG I + SF DGV +E G P+ S + LL R+
Sbjct: 113 IQQILHDYVRPAVEQDGGAISYKSFDDGVVTVELRGSCSGCPSSTITLKSGIQNLLQRM 171
>gi|255713524|ref|XP_002553044.1| KLTH0D07458p [Lachancea thermotolerans]
gi|238934424|emb|CAR22606.1| KLTH0D07458p [Lachancea thermotolerans CBS 6340]
Length = 248
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 104/185 (56%), Gaps = 19/185 (10%)
Query: 21 IQFISFQDGVLEEPGQ-TIDFPTGQAAYC--SPLGKLLF-RIEGVKSVFFGHDFITVTKQ 76
++FIS +L+E G+ +++ + SPL LF + GV+++ G DFITV K
Sbjct: 34 LKFISTDGELLQERGKPSVEIKNTDESLIKHSPLASRLFTQCPGVEALMIGDDFITVNK- 92
Query: 77 DDDVDWKLLKPEIFATIMDFFSSGLPVLT-------DAQPSSDTVI-----HEDDDETVQ 124
D+ V W + P + + + +SG +T + D + +ED+ E
Sbjct: 93 DEMVHWNQITPSVIDLLTQYLASGREAVTPEFFSVQEQGVGYDVNVPKFEYNEDEQEISD 152
Query: 125 MIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
MI EL+ TRIRP + +DGGDIQ+ + Q G V LK+QG+C SC SS VTLK+G+++ML+
Sbjct: 153 MIDELIQTRIRPAIMDDGGDIQYRGYDPQTGTVYLKLQGACKSCSSSEVTLKHGIESMLK 212
Query: 183 FYIPE 187
YI E
Sbjct: 213 HYIEE 217
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 20/26 (76%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MI EL+ TRIRP + +DGGDIQ+ +
Sbjct: 153 MIDELIQTRIRPAIMDDGGDIQYRGY 178
>gi|399125228|pdb|2LTM|A Chain A, Solution Nmr Structure Of Nfu1 Iron-Sulfur Cluster
Scaffold Homolog From Homo Sapiens, Northeast Structural
Genomics Consortium (Nesg) Target Hr2876b
Length = 107
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 63/71 (88%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG D ITVTK+++++DW LLKP+I+ATIMD
Sbjct: 36 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDSITVTKENEELDWNLLKPDIYATIMD 95
Query: 96 FFSSGLPVLTD 106
FF+SGLP++T+
Sbjct: 96 FFASGLPLVTE 106
>gi|42523787|ref|NP_969167.1| nifU related protein [Bdellovibrio bacteriovorus HD100]
gi|39575994|emb|CAE80160.1| nifU related protein [Bdellovibrio bacteriovorus HD100]
Length = 186
Score = 107 bits (266), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/153 (41%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
Q D PT Q A SPL +F SV+ G DFITVTKQD VDW+LL + I +
Sbjct: 31 QGFDCPTVQEAERSPLAAKIFGFPWTSSVYVGPDFITVTKQDW-VDWELLAHPLSGLIQE 89
Query: 96 FFSSGLPVL-TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
PV+ T + D +E+D V+ IK +L+ IRP V DGGDI F ++ V
Sbjct: 90 HLDRDEPVVVTFVEAEED---NENDSPMVRNIKSVLNREIRPVVALDGGDIVFHKYENNV 146
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ + M+G+C+ CPSS VTLK G++ ++ PE
Sbjct: 147 LYIHMKGACSGCPSSTVTLKEGIEVRMKELFPE 179
>gi|444911332|ref|ZP_21231507.1| NifU protein [Cystobacter fuscus DSM 2262]
gi|444718090|gb|ELW58906.1| NifU protein [Cystobacter fuscus DSM 2262]
Length = 187
Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL L I+GV +V G +F+TVTK D +W L + T+ + +GLP + +
Sbjct: 42 SPLAAKLMGIQGVTAVMVGSNFVTVTKGDAG-EWDELNDAVMGTLDEHLGAGLPAVNEEA 100
Query: 109 PSSDTVIHEDDDETVQM-IKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCP 167
++ +V+ I+E+LD IRP V +DGGDI F+ G+V L M+GSC CP
Sbjct: 101 IAAARTAAGTAGGSVETRIQEILDAEIRPAVAQDGGDITLDRFEEGIVYLHMKGSCAGCP 160
Query: 168 SSVVTLKNGVQNMLQFYIPETT 189
SS TLK G++ L+ +PE T
Sbjct: 161 SSTATLKMGIETRLRELVPEVT 182
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
I+E+LD IRP V +DGGDI F++G+ L G P+ A
Sbjct: 119 IQEILDAEIRPAVAQDGGDITLDRFEEGIVYLHMKGSCAGCPSSTA 164
>gi|312129640|ref|YP_003996980.1| nitrogen-fixing protein NifU domain-containing protein
[Leadbetterella byssophila DSM 17132]
gi|311906186|gb|ADQ16627.1| nitrogen-fixing NifU domain protein [Leadbetterella byssophila DSM
17132]
Length = 199
Score = 106 bits (264), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 89/160 (55%), Gaps = 8/160 (5%)
Query: 35 GQTIDFPTGQAAY----CSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIF 90
G + D+PT + + SPL LF + V+ VF +FIT+TK+ D +DW + ++
Sbjct: 31 GLSFDYPTKASTFDEKKASPLASDLFLFDFVERVFISSNFITLTKRGD-IDWDDVLGDVR 89
Query: 91 ATIMDFFSSGLPVLTDAQPSSDTVIHE-DDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
I +F PV S T+I + D E V IK LD +RP V+ DGG I F S
Sbjct: 90 QFIKTYFDENHPVFAQKTIDSHTLIVQGSDSEVVAKIKSTLDQYVRPAVESDGGAINFSS 149
Query: 150 FQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G VK+ +QGSC+ CPS+ +TLK G++ +L IPE
Sbjct: 150 FEEESGTVKVLLQGSCSGCPSASLTLKAGIERLLTTMIPE 189
>gi|385301749|gb|EIF45917.1| protein involved in iron metabolism in mitochondria [Dekkera
bruxellensis AWRI1499]
Length = 287
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 37/162 (22%)
Query: 61 VKSVFFGHDFITVTKQDDDV--------DWKLLKPEIFATIMDFFSSGLPVLTDAQPSSD 112
+ SV G++F+TV K+ D DW +LKP+IF+ + + + G PVLTD D
Sbjct: 87 ISSVLLGYNFLTVVKKTDGEMKDNKKVPDWSVLKPQIFSIMTEHLTMGRPVLTDKY--YD 144
Query: 113 TVIHEDDDET-------------------------VQMIKELLDTRIRPTVQEDGGDIQF 147
+ + D+ V+++KE+L TRI+P +QEDGGDI+F
Sbjct: 145 YIAGKMADQNRKEEEERDAEELEEEDEEIDPNDEVVELVKEMLVTRIQPAIQEDGGDIKF 204
Query: 148 ISFQG--GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ + G G V L++ G+C SC SS +TLKNG++ ML++YI E
Sbjct: 205 LKWDGETGTVYLRLIGACKSCSSSEITLKNGIEEMLKYYIDE 246
Score = 40.8 bits (94), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
++KE+L TRI+P +QEDGGDI+F+ + DG E G G CS
Sbjct: 182 LVKEMLVTRIQPAIQEDGGDIKFLKW-DG---ETGTVYLRLIGACKSCS 226
>gi|326801010|ref|YP_004318829.1| Scaffold protein Nfu/NifU [Sphingobacterium sp. 21]
gi|326551774|gb|ADZ80159.1| Scaffold protein Nfu/NifU [Sphingobacterium sp. 21]
Length = 184
Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 22/160 (13%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
++DFP + A SP + LF+ V VFF +F+T+TK +D +W+ +I + DF
Sbjct: 29 SLDFPDKEKAQSSPFARELFKFNFVNGVFFASNFVTITKSEDS-EWE----DILPILKDF 83
Query: 97 FSSGLPVLTDAQPSSDTVIHE---------DDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ S+ +IHE + ET + I+++L +RP V++DGG I +
Sbjct: 84 VKGAV--------ESELLIHEVERDENVAFEGSETEKKIQQVLHDYVRPAVEQDGGAIAY 135
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
SF GVV ++++GSC+ CPSS +TLK G++ +L+ +PE
Sbjct: 136 KSFDEGVVTVELRGSCSGCPSSTITLKAGIEGLLKRMVPE 175
>gi|403215155|emb|CCK69655.1| hypothetical protein KNAG_0C05570 [Kazachstania naganishii CBS
8797]
Length = 265
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 91/162 (56%), Gaps = 17/162 (10%)
Query: 49 SPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
S L K LF + G++ + G DF+TV K D V W +KP + + SSG V+++
Sbjct: 69 SNLAKTLFVQCPGIEELMIGDDFLTVNK-DSMVHWNQIKPAVLEILTSHLSSGDSVVSEE 127
Query: 108 ------QPSSDTVIH-------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
Q ++ ED+ E ++I+EL+DTRIRP + EDGGDI + +
Sbjct: 128 FQNVKEQKEGGYKVNMPKFEYNEDEQEVSELIEELIDTRIRPAIMEDGGDIDYRGWDPAT 187
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNM 194
G V LK+QG+CTSC SS VTLK G+++ML+ Y+ E + M
Sbjct: 188 GTVYLKLQGACTSCSSSEVTLKYGIESMLKHYVEEVNDVIQM 229
Score = 38.9 bits (89), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 158 LIEELIDTRIRPAIMEDGGDIDY 180
>gi|338212515|ref|YP_004656570.1| nitrogen-fixing NifU domain-containing protein [Runella
slithyformis DSM 19594]
gi|336306336|gb|AEI49438.1| nitrogen-fixing NifU domain-containing protein [Runella
slithyformis DSM 19594]
Length = 195
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 91/161 (56%), Gaps = 11/161 (6%)
Query: 35 GQTIDFPTGQAA----YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK--LLKPE 88
G + D+P ++A SPL LF+ V+ VF +F+T+TK DD DW +L +
Sbjct: 29 GLSFDYPDIESAQAEGKASPLAGDLFQFPFVQRVFLASNFVTLTK-DDATDWGDVILDTK 87
Query: 89 IFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
F I +F PV +T I + D T++ IK +LD +RP V+ DGG I F
Sbjct: 88 QFLKI--YFEENHPVFEQKTVDKNTAILDTDSPTIRQIKTILDDYVRPAVESDGGAISFH 145
Query: 149 SFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
SF+ G VK+ +QGSC+ CPSS +TLK G+QN+L +P+
Sbjct: 146 SFEEETGTVKVLLQGSCSGCPSSTLTLKAGIQNLLTQMVPD 186
>gi|221504979|gb|EEE30644.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 235
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 18/149 (12%)
Query: 56 FRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSD--- 112
F+I+G SV ++TV K D DWK L+ + I D +SG+P + A S D
Sbjct: 24 FQIDGTSSVLIAGGYVTVVKARD-TDWKDLEEPVKRCIQDHLTSGIPAVQRAVSSEDVSG 82
Query: 113 ------------TVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLK 158
E++++ + I+ELL R RP +Q DGGD++ + F + G+V +
Sbjct: 83 AAEGRPQVPEKKNAKSEEEEDLSEAIRELLHMRARPMLQADGGDLEMMRFDEETGIVWVH 142
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++GSC CPSS++T+K G++ MLQ+YIPE
Sbjct: 143 LKGSCEGCPSSLITVKRGMKQMLQYYIPE 171
>gi|375013379|ref|YP_004990367.1| thioredoxin-like protein [Owenweeksia hongkongensis DSM 17368]
gi|359349303|gb|AEV33722.1| thioredoxin-like protein [Owenweeksia hongkongensis DSM 17368]
Length = 213
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 94/168 (55%), Gaps = 20/168 (11%)
Query: 38 IDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFF 97
++F + A SPL LF VK VF +++ +TK D V+W+ + E+ + +F
Sbjct: 36 VEFKNIEEAQPSPLAVKLFHFPFVKEVFISGNYVAITKYDI-VEWEDVTMEVREMLREFL 94
Query: 98 SSGLPVLT---DAQP----------SSDTVIHEDD------DETVQMIKELLDTRIRPTV 138
++G VL+ AQ SS +V H D+ +E + I LLD ++P V
Sbjct: 95 ANGNEVLSASYSAQAEDSTEAGTSESSSSVAHPDEKDPAEWEEIEKKIASLLDEYVKPAV 154
Query: 139 QEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
DGG+I+F+ ++ G VK+ +QG+C+ CPSS +TLK G+QN+LQ +P
Sbjct: 155 ASDGGNIKFLKYEDGAVKVLLQGACSGCPSSTMTLKQGIQNLLQEMLP 202
>gi|237843489|ref|XP_002371042.1| NifU-like domain-containing protein [Toxoplasma gondii ME49]
gi|211968706|gb|EEB03902.1| NifU-like domain-containing protein [Toxoplasma gondii ME49]
gi|221484803|gb|EEE23097.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 235
Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 18/149 (12%)
Query: 56 FRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSD--- 112
F+I+G SV ++TV K D DWK L+ + I D +SG+P + A S D
Sbjct: 24 FQIDGTSSVLIAGGYVTVVKARD-TDWKDLEEPVKRCIQDHLTSGIPAVQRAVSSEDVSG 82
Query: 113 ------------TVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLK 158
E++++ + I+ELL R RP +Q DGGD++ + F + G+V +
Sbjct: 83 AAEGRPEVPEKKNAKSEEEEDLSEAIRELLHMRARPMLQADGGDLEMMRFDEETGIVWVH 142
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++GSC CPSS++T+K G++ MLQ+YIPE
Sbjct: 143 LKGSCEGCPSSLITVKRGMKQMLQYYIPE 171
>gi|261332565|emb|CBH15560.1| HIRA-interacting protein 5, putative [Trypanosoma brucei gambiense
DAL972]
Length = 261
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 13/163 (7%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFR--IEGVKSVFFG--HDFITVTKQDDDVDWKLLKPEIF 90
GQT D A+ PL + +F + V SVF H ITV VDW L+ I
Sbjct: 40 GQTCDVAHMSLAWVHPLSQGIFEQYPQEVASVFIAPRHTSITVHPH---VDWNKLEWSIS 96
Query: 91 ATI---MDFFSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
+ I + F ++ P + A D VIHEDD E +Q IKEL+ ++RP VQ DGGD++
Sbjct: 97 SFIGHYLVFTNACFPAAAEYALLEDDLVIHEDDSEVLQCIKELVRGQVRPMVQRDGGDVK 156
Query: 147 FISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++F + GVV L M G+C +CPSS TLK+GV+ +L+ ++PE
Sbjct: 157 LLNFNEKTGVVSLAMLGACRTCPSSQNTLKDGVERLLKHFLPE 199
>gi|426404273|ref|YP_007023244.1| nifU related protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|425860941|gb|AFY01977.1| nifU related protein [Bdellovibrio bacteriovorus str. Tiberius]
Length = 186
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 5/153 (3%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
Q D PT Q A SPL +F SV+ G DFITVTKQD VDW+LL + I +
Sbjct: 31 QGFDCPTVQDAERSPLAAKIFGFPWTSSVYVGPDFITVTKQDW-VDWELLAHPLTGLIQE 89
Query: 96 FFSSGLPVL-TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
PV+ T + D +E+D + IK +L+ IRP V DGGDI F ++ V
Sbjct: 90 HMDRDEPVVVTFVEAEED---NENDSPMARNIKSVLNREIRPVVALDGGDIVFHKYENNV 146
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ + M+G+C+ CPSS VTLK G++ ++ PE
Sbjct: 147 LYIHMKGACSGCPSSTVTLKEGIEVRMKELFPE 179
>gi|444316718|ref|XP_004179016.1| hypothetical protein TBLA_0B06750 [Tetrapisispora blattae CBS 6284]
gi|387512056|emb|CCH59497.1| hypothetical protein TBLA_0B06750 [Tetrapisispora blattae CBS 6284]
Length = 259
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 119/215 (55%), Gaps = 27/215 (12%)
Query: 3 KELLDTRIRPTVQEDGGDIQFISFQDGVLEEP--GQTIDFPTGQAAYCS--PLGKLLFRI 58
+ L+ + T E+ ++F+S DG L +P ++I+ + S PL +F++
Sbjct: 25 RRYLNIKTLSTPNENA--LKFVSV-DGELLQPLGSESIEIKNTDSKLISNVPLADRIFKL 81
Query: 59 -EGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL------------T 105
+GV S+ G +F+T+ K D+ ++W+++ P + ++ +SG + +
Sbjct: 82 CKGVDSLMIGDNFLTINK-DEFINWQMISPIVIDLMIKHLASGHDTIKEEFHAIKEFDGS 140
Query: 106 DAQPSSDTV----IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKM 159
++Q + + EDD+E +MI EL+ TRIRP +Q+DGGDIQ+ ++ G V LK+
Sbjct: 141 NSQGYELNIPKFELTEDDEEVSEMIDELIKTRIRPAIQDDGGDIQYRAYDPNTGTVYLKL 200
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNM 194
QG+C SC SS TLK G+++ML+ Y+ E + M
Sbjct: 201 QGACKSCSSSEDTLKYGIESMLKHYVEEVQNVVQM 235
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MI EL+ TRIRP +Q+DGGDIQ+ ++
Sbjct: 164 MIDELIKTRIRPAIQDDGGDIQYRAY 189
>gi|313230549|emb|CBY18765.1| unnamed protein product [Oikopleura dioica]
Length = 146
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 49/72 (68%), Positives = 60/72 (83%), Gaps = 2/72 (2%)
Query: 120 DETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGV 177
+E V MIKELLDTRIRPTV EDGGDI F+SF GV++L + G+C +CPSSVVTLK+GV
Sbjct: 47 NEVVAMIKELLDTRIRPTVMEDGGDIAFVSFDPDTGVLQLSLIGACATCPSSVVTLKHGV 106
Query: 178 QNMLQFYIPETT 189
+NM++FYIPE T
Sbjct: 107 ENMMKFYIPEIT 118
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 28/34 (82%), Gaps = 2/34 (5%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGVLE 32
MIKELLDTRIRPTV EDGGDI F+SF GVL+
Sbjct: 52 MIKELLDTRIRPTVMEDGGDIAFVSFDPDTGVLQ 85
>gi|71747438|ref|XP_822774.1| HIRA-interacting protein 5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832442|gb|EAN77946.1| HIRA-interacting protein 5, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 261
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/163 (40%), Positives = 93/163 (57%), Gaps = 13/163 (7%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFR--IEGVKSVFFG--HDFITVTKQDDDVDWKLLKPEIF 90
GQT D A+ PL + +F + V SVF H ITV VDW L+ I
Sbjct: 40 GQTCDVAHMGLAWVHPLSQGIFEQYPQEVASVFIAPRHTSITVHPH---VDWNKLEWSIS 96
Query: 91 ATI---MDFFSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
+ I + F ++ P + A D VIHEDD E +Q IKEL+ ++RP VQ DGGD++
Sbjct: 97 SFIGHYLVFTNACFPAAAEYALLEDDLVIHEDDSEVLQCIKELVREQVRPMVQRDGGDVK 156
Query: 147 FISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++F + GVV L M G+C +CPSS TLK+GV+ +L+ ++PE
Sbjct: 157 LLNFNEKTGVVSLAMLGACRTCPSSQNTLKDGVERLLKHFLPE 199
>gi|390443009|ref|ZP_10230808.1| Scaffold protein Nfu/NifU [Nitritalea halalkaliphila LW7]
gi|389667317|gb|EIM78740.1| Scaffold protein Nfu/NifU [Nitritalea halalkaliphila LW7]
Length = 131
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/125 (44%), Positives = 82/125 (65%), Gaps = 4/125 (3%)
Query: 64 VFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSG-LPVLTDAQPSSDTVIHEDDDET 122
+F +F+TVTK+++ VDW ++ + I + ++G PV SD + E+D E+
Sbjct: 1 MFIASNFVTVTKKEE-VDWIEIQEHLRGHIKQYLAAGKAPV--KKTFDSDPLFDENDSES 57
Query: 123 VQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
V+ IK +LD IRP V++DGG I F SF+ GVVK+ +QGSC+ CPSS VTLK G++N+L
Sbjct: 58 VKKIKGILDEYIRPAVEQDGGAIVFHSFKDGVVKVLLQGSCSGCPSSTVTLKAGIENLLT 117
Query: 183 FYIPE 187
+PE
Sbjct: 118 RMLPE 122
Score = 40.0 bits (92), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
IK +LD IRP V++DGG I F SF+DGV++
Sbjct: 61 IKGILDEYIRPAVEQDGGAIVFHSFKDGVVK 91
>gi|313677059|ref|YP_004055055.1| scaffold protein nfu/nifu [Marivirga tractuosa DSM 4126]
gi|312943757|gb|ADR22947.1| Scaffold protein Nfu/NifU [Marivirga tractuosa DSM 4126]
Length = 198
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 94/155 (60%), Gaps = 4/155 (2%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G + DFP+ + +PL ++LF+ E V VF+ +FITVTK+ + +W ++ ++ TI
Sbjct: 34 GDSFDFPSIEDTAQAPLAEILFKKEYVDRVFYMSNFITVTKKPE-YEWVEIQNDVKDTIK 92
Query: 95 DFFSSGLPVLT-DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
+F SG V+ A+ + ++ E + IK +LD I+P V++DGG I F S++
Sbjct: 93 EFLESGKRVIELQAKDLFEETNTSENAELEEQIKNILDEYIKPAVEQDGGAISFHSYEKD 152
Query: 154 V--VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
V L +QG+C+ CPSS +TLK G++N+L+ +P
Sbjct: 153 TQRVNLLLQGACSGCPSSTITLKAGIENLLKRMLP 187
>gi|254582903|ref|XP_002499183.1| ZYRO0E05830p [Zygosaccharomyces rouxii]
gi|238942757|emb|CAR30928.1| ZYRO0E05830p [Zygosaccharomyces rouxii]
Length = 254
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 15/156 (9%)
Query: 53 KLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPS-- 110
++ + GV+S+ G DF+TV K D V W +KP + + +SG V++D +
Sbjct: 74 RIFLQCPGVESLMIGDDFLTVNK-DSMVHWNQIKPGVIELLTSQLASGEDVVSDEFHTIR 132
Query: 111 -SDT---------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLK 158
SD + E+D+E MI EL+ TRIRP +Q+DGGDIQ+ ++ + G V LK
Sbjct: 133 DSDAGYEVTAPKFELSEEDEEVSDMIDELIQTRIRPAIQDDGGDIQYRAYDPKTGTVYLK 192
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNM 194
+QG+C SC SS TLK G++ ML+ Y+ E T + M
Sbjct: 193 LQGACKSCSSSEDTLKAGIEGMLKHYVDEVTNVVQM 228
Score = 41.2 bits (95), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MI EL+ TRIRP +Q+DGGDIQ+ ++
Sbjct: 157 MIDELIQTRIRPAIQDDGGDIQYRAY 182
>gi|156839096|ref|XP_001643243.1| hypothetical protein Kpol_460p20 [Vanderwaltozyma polyspora DSM
70294]
gi|156113844|gb|EDO15385.1| hypothetical protein Kpol_460p20 [Vanderwaltozyma polyspora DSM
70294]
Length = 256
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 89/150 (59%), Gaps = 16/150 (10%)
Query: 53 KLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT------- 105
+L + G++S+ G DF+TV K D+ + W +KP + ++ SSG ++T
Sbjct: 76 RLFVQCPGIESLMIGDDFVTVNK-DEMIHWNQIKPNVLEILLQQLSSGESIVTQKFHEIS 134
Query: 106 -DAQPSSDTVI-----HEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKL 157
+++ D + +ED+ E MI EL+ TRIRP +Q+DGGDIQ+ + + G V L
Sbjct: 135 KESESGYDIQLPKFELNEDEQEVSDMIDELIQTRIRPAIQDDGGDIQYRGYDPKTGKVYL 194
Query: 158 KMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
K+QG+C SC SS TLK G+++ML+ Y+ E
Sbjct: 195 KLQGACKSCSSSEDTLKYGIESMLKHYVEE 224
Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MI EL+ TRIRP +Q+DGGDIQ+ +
Sbjct: 160 MIDELIQTRIRPAIQDDGGDIQYRGY 185
>gi|149280243|ref|ZP_01886366.1| thioredoxin-related protein [Pedobacter sp. BAL39]
gi|149229080|gb|EDM34476.1| thioredoxin-related protein [Pedobacter sp. BAL39]
Length = 183
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 89/151 (58%), Gaps = 8/151 (5%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DF T ++A S K LF+ V VFF +F+T+TK +D DW+ +I A + DF
Sbjct: 30 DFATRESAEHSQFAKELFKFNFVNGVFFASNFVTITKTED-ADWQ----DIEALLKDFVK 84
Query: 99 SGLP--VLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVK 156
+ + ++ E D ++ I+++L +RP V++DGG I + SF GVV
Sbjct: 85 GAVESEYKIKEETQAEAPAFEGSDLEIK-IQQILHDYVRPAVEQDGGAISYKSFDEGVVT 143
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++++GSC+ CPSS +TLK+G+QN+LQ +PE
Sbjct: 144 VELRGSCSGCPSSTITLKSGIQNLLQRMVPE 174
>gi|367010960|ref|XP_003679981.1| hypothetical protein TDEL_0B06410 [Torulaspora delbrueckii]
gi|359747639|emb|CCE90770.1| hypothetical protein TDEL_0B06410 [Torulaspora delbrueckii]
Length = 252
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 91/157 (57%), Gaps = 16/157 (10%)
Query: 53 KLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD----AQ 108
++ + GV+S+ G +F+TV K D V W + P++ + + +SG ++D +
Sbjct: 73 RIFLQCPGVESLMIGDNFLTVNK-DSMVHWNQITPKVIELLTQYLASGETAVSDEFHTVR 131
Query: 109 PSSDT---------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKL 157
+SD + E+D+E MI EL+ TRIRP +Q+DGGDIQ+ ++ + G V L
Sbjct: 132 ENSDVGYDVSVPTFELTEEDEEISDMIDELIQTRIRPAIQDDGGDIQYRAYDPKTGTVYL 191
Query: 158 KMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNM 194
K+QG+C SC SS TLK G+++ML+ Y+ E + M
Sbjct: 192 KLQGACKSCSSSEDTLKYGIESMLKHYVEEVQNVVQM 228
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MI EL+ TRIRP +Q+DGGDIQ+ ++
Sbjct: 157 MIDELIQTRIRPAIQDDGGDIQYRAY 182
>gi|383458520|ref|YP_005372509.1| NifU family protein [Corallococcus coralloides DSM 2259]
gi|380733603|gb|AFE09605.1| NifU family protein [Corallococcus coralloides DSM 2259]
Length = 186
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 85/156 (54%), Gaps = 2/156 (1%)
Query: 35 GQTIDFPTGQAAYC-SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
G ++F A SPL L I+GV +V G +F+TVTK + +W L + +T+
Sbjct: 27 GGAVNFTNRDDAQAKSPLALRLMDIQGVTAVMLGTNFVTVTKGESG-EWDELNDSVMSTL 85
Query: 94 MDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
S GLPV+ +A ++ D Q I+ +LD IRP V +DGGDI F+ G
Sbjct: 86 DTHLSEGLPVVDEAAVAAARQTVSADGTVEQRIQVILDEEIRPAVAQDGGDITLDRFEDG 145
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+V L M+GSC CPSS TLK G++ L+ IPE T
Sbjct: 146 IVYLHMKGSCAGCPSSTATLKMGIEGRLREMIPEVT 181
Score = 36.2 bits (82), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
I+ +LD IRP V +DGGDI F+DG+ L G P+ A
Sbjct: 118 IQVILDEEIRPAVAQDGGDITLDRFEDGIVYLHMKGSCAGCPSSTA 163
>gi|71666135|ref|XP_820030.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885357|gb|EAN98179.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 261
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 92/167 (55%), Gaps = 17/167 (10%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEG--VKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
GQT + A+ PL +F G V SVF +++T + VDW L+ +
Sbjct: 40 GQTCEVAHRGLAWVHPLSNGIFEQYGQEVASVFIAPRHVSITVYPN-VDWSTLE----WS 94
Query: 93 IMDFFSSGLPVLTDAQPSS--------DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
I F L + + P++ D IHE+D E +Q IKELL ++RP VQ DGGD
Sbjct: 95 ISSFIGHYLLFVNECVPAAKEYTLMEDDLRIHEEDSEVLQCIKELLREQVRPMVQRDGGD 154
Query: 145 IQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
++ ++F + GVV L M G+C +CPSS TLK+G++ +++ ++PE T
Sbjct: 155 VKLLNFNEETGVVSLAMLGACRTCPSSSNTLKDGIERVMKHFLPEVT 201
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD 28
IKELL ++RP VQ DGGD++ ++F +
Sbjct: 136 IKELLREQVRPMVQRDGGDVKLLNFNE 162
>gi|407835010|gb|EKF99103.1| hypothetical protein TCSYLVIO_009988 [Trypanosoma cruzi]
Length = 261
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 92/167 (55%), Gaps = 17/167 (10%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEG--VKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
GQT + A+ PL +F G V SVF +++T + VDW L+ +
Sbjct: 40 GQTCEVAHRGLAWVHPLSNGIFEQYGQEVASVFIAPRHVSITVYPN-VDWSTLE----WS 94
Query: 93 IMDFFSSGLPVLTDAQPSS--------DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
I F L + + P++ D IHE+D E +Q IKELL ++RP VQ DGGD
Sbjct: 95 ISSFIGHYLLFVNECVPAAKEYTLMEDDLRIHEEDSEVLQCIKELLREQVRPMVQRDGGD 154
Query: 145 IQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
++ ++F + GVV L M G+C +CPSS TLK+G++ +++ ++PE T
Sbjct: 155 VKLLNFNDETGVVSLAMLGACRTCPSSSNTLKDGIERVMKHFLPEVT 201
Score = 38.9 bits (89), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD 28
IKELL ++RP VQ DGGD++ ++F D
Sbjct: 136 IKELLREQVRPMVQRDGGDVKLLNFND 162
>gi|297830796|ref|XP_002883280.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297329120|gb|EFH59539.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 96
Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/72 (63%), Positives = 59/72 (81%), Gaps = 2/72 (2%)
Query: 118 DDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKN 175
DD ETV MIKELL+TRIRP VQ+DGGDI++ F + G+VKL+MQG+C+ CPSS VTLK+
Sbjct: 1 DDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKS 60
Query: 176 GVQNMLQFYIPE 187
G++NML Y+ E
Sbjct: 61 GIENMLMHYVSE 72
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGV--LEEPGQTIDFPTGQAAYCSPLGKLLF 56
MIKELL+TRIRP VQ+DGGDI++ F + G+ L G P+ S + +L
Sbjct: 8 MIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLM 67
Query: 57 R----IEGVKSVFFGHD 69
++GV+ F G D
Sbjct: 68 HYVSEVKGVEQEFDGED 84
>gi|327402876|ref|YP_004343714.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
gi|327318384|gb|AEA42876.1| nitrogen-fixing NifU domain-containing protein [Fluviicola
taffensis DSM 16823]
Length = 201
Score = 102 bits (254), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 94/167 (56%), Gaps = 19/167 (11%)
Query: 35 GQTIDFPTG-QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
G++++F +G +A SPL + LF VK+VF +F+TV K +D + W + E+ I
Sbjct: 31 GESVEFHSGSEAKGYSPLAEELFNFPFVKTVFITANFVTVAK-NDSISWDFVTMELREFI 89
Query: 94 MDFFSSG------LPVLT-------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
+ G +PV D++P+ + E DD I+ LLD +RP V+
Sbjct: 90 KSWIVDGKDILIQMPVAKPKAASGDDSKPAKEYAPSEYDD----AIRSLLDEYVRPAVEG 145
Query: 141 DGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGG I F+ F+ G V + ++G+C+ CPSS TLK G++N+L+ ++P+
Sbjct: 146 DGGAIDFVGFEEGTVTVALRGACSGCPSSTATLKGGIENLLKQHLPD 192
Score = 37.0 bits (84), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+ LLD +RP V+ DGG I F+ F++G +
Sbjct: 131 IRSLLDEYVRPAVEGDGGAIDFVGFEEGTV 160
>gi|408674026|ref|YP_006873774.1| nitrogen-fixing NifU domain-containing protein [Emticicia
oligotrophica DSM 17448]
gi|387855650|gb|AFK03747.1| nitrogen-fixing NifU domain-containing protein [Emticicia
oligotrophica DSM 17448]
Length = 198
Score = 102 bits (254), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 91/164 (55%), Gaps = 8/164 (4%)
Query: 31 LEEPGQTIDFPT----GQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
L G + D+PT + + SPL LF+ ++ +F +FIT+TK DD+ +W+ +
Sbjct: 27 LAPEGLSFDYPTIASTAEESKASPLAGDLFQFPFIRRIFIASNFITITK-DDETEWEDVV 85
Query: 87 PEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETV-QMIKELLDTRIRPTVQEDGGDI 145
+I + FF V +T+I + +D V IK LD +RP V+ DGG I
Sbjct: 86 YDIKKFLKIFFEQNNLVFAQKTIDKNTLIVDANDTAVIAKIKSTLDQYVRPAVESDGGAI 145
Query: 146 QFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F SF G VK+ +QGSC+ CPSS +TLK+G++ +L+ +PE
Sbjct: 146 NFASFDEISGQVKVYLQGSCSGCPSSTITLKDGIERLLKTMVPE 189
>gi|342184200|emb|CCC93681.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 261
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 92/164 (56%), Gaps = 11/164 (6%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFR--IEGVKSVFFG--HDFITVTK--QDDDVDWKLLKPE 88
GQT D A+ PL + LF + V SVF H ITV + D+++W +
Sbjct: 40 GQTCDVAHMGVAWVHPLSRGLFEQYPQEVASVFIAPRHTAITVHPHVKWDELEWSI--SS 97
Query: 89 IFATIMDFFSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ F ++ P + A D V+HE D E +Q IKEL+ ++RP VQ DGGD++
Sbjct: 98 FLGHYLVFTNTCFPAAPEYALLEDDLVVHEGDSEVLQCIKELVREKVRPMVQRDGGDVKL 157
Query: 148 ISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
++F + G+V L M G+C +CPSS TLK+GV+ +L+ ++PE T
Sbjct: 158 LNFNEKTGIVSLAMLGACRTCPSSQNTLKDGVERLLRHFLPEVT 201
>gi|417110233|ref|ZP_11963568.1| nitrogen fixation protein [Rhizobium etli CNPAF512]
gi|327188587|gb|EGE55797.1| nitrogen fixation protein [Rhizobium etli CNPAF512]
Length = 107
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 65/100 (65%), Gaps = 6/100 (6%)
Query: 94 MDFFSSGLPVLTDAQ------PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
M+ F SG PV+ DA + D E D+ V IKELL+TR+RP V +DGGDI F
Sbjct: 1 MEHFMSGKPVMGDASILSEDADAGDEFFDEGDESIVLTIKELLETRVRPAVAQDGGDITF 60
Query: 148 ISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F+ G V L M+GSC+ CPSS TLK+GVQN+L+ ++PE
Sbjct: 61 RGFKDGKVYLNMKGSCSGCPSSTATLKHGVQNLLRHFVPE 100
Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKELL+TR+RP V +DGGDI F F+DG
Sbjct: 39 IKELLETRVRPAVAQDGGDITFRGFKDG 66
>gi|45185274|ref|NP_982991.1| ABR045Wp [Ashbya gossypii ATCC 10895]
gi|44980932|gb|AAS50815.1| ABR045Wp [Ashbya gossypii ATCC 10895]
gi|374106194|gb|AEY95104.1| FABR045Wp [Ashbya gossypii FDAG1]
Length = 239
Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 90/147 (61%), Gaps = 7/147 (4%)
Query: 49 SPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
+PL + LF ++ GV++V G DF+TV+K D ++ W + P + + +SG +
Sbjct: 64 APLAEKLFAQVPGVEAVMIGDDFVTVSK-DAELGWAQVTPRVLEVLTQQLASGQAAVQGQ 122
Query: 108 QPSSDTVIHEDDDETVQM---IKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGS 162
T + D+E ++ I+E++ TR+RP + +DGGDIQ+ + + G V LK+QG+
Sbjct: 123 VAVGGTERFQYDEEEQEISDTIEEIIQTRVRPAIMDDGGDIQYRGWDPETGRVYLKLQGA 182
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETT 189
C SC SS VTLK+G+++ML+ Y+ E +
Sbjct: 183 CKSCSSSEVTLKHGIESMLKHYVEEVS 209
>gi|8118105|gb|AAF72894.1|AF228511_2 NU1 [Trypanosoma cruzi]
Length = 261
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 17/167 (10%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEG--VKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
GQT + A+ PL +F G V SVF +++T + V+W L+ +
Sbjct: 40 GQTCEVAHRGLAWVHPLSNGIFEQYGQEVASVFIAPRHVSITVYPN-VEWSKLE----WS 94
Query: 93 IMDFFSSGLPVLTDAQPSS--------DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
I F L + + P++ D IHE+D E +Q IKELL ++RP VQ DGGD
Sbjct: 95 ISSFIGHYLLFVNECVPAAKEYTLMEDDLRIHEEDSEVLQCIKELLREQVRPMVQRDGGD 154
Query: 145 IQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
++ ++F + GVV L M G+C +CPSS TLK+G++ +++ ++PE T
Sbjct: 155 VKLLNFNEETGVVSLAMLGACRTCPSSSNTLKDGIERVMKHFLPEVT 201
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD 28
IKELL ++RP VQ DGGD++ ++F +
Sbjct: 136 IKELLREQVRPMVQRDGGDVKLLNFNE 162
>gi|313220324|emb|CBY31180.1| unnamed protein product [Oikopleura dioica]
Length = 95
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/67 (70%), Positives = 57/67 (85%), Gaps = 2/67 (2%)
Query: 125 MIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
MIKELLDTRIRPTV EDGGDI F+SF GV++L + G+C +CPSSVVTLK+GV+NM++
Sbjct: 1 MIKELLDTRIRPTVMEDGGDIAFVSFDPDTGVLQLSLIGACATCPSSVVTLKHGVENMMK 60
Query: 183 FYIPETT 189
FYIPE T
Sbjct: 61 FYIPEIT 67
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/26 (88%), Positives = 24/26 (92%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKELLDTRIRPTV EDGGDI F+SF
Sbjct: 1 MIKELLDTRIRPTVMEDGGDIAFVSF 26
>gi|50312363|ref|XP_456215.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645351|emb|CAG98923.1| KLLA0F25476p [Kluyveromyces lactis]
Length = 256
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/186 (34%), Positives = 103/186 (55%), Gaps = 20/186 (10%)
Query: 21 IQFISFQDGVLEEPG-QTIDFPTGQAAYC--SPL-GKLLFRIEGVKSVFFGHDFITVTKQ 76
++F+S G+L+E G Q+++ +P K+ + GV+++ G DF+T+ K
Sbjct: 41 LKFVSTDGGLLQEKGTQSVEIKNTDEELLKHAPFPSKVFQQCPGVEAMMIGDDFVTINK- 99
Query: 77 DDDVDWKLLKPEIFATIMDFFSSG----LPVLTDAQPSSDT---------VIHEDDDETV 123
D+ + W + P + ++ +SG LP D + SS+ ED+ E
Sbjct: 100 DELIHWNQVTPTVIDLLVQHLASGKPTFLPDFFDVKKSSEVGYDVDIPKFEYDEDEQEIS 159
Query: 124 QMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
+MI EL+ TRIRP + +DGGDIQ+ + + G V LK+QG+C SC SS TLK+G++ ML
Sbjct: 160 EMIDELIQTRIRPAIMDDGGDIQYRGWNPETGTVYLKLQGACKSCSSSEDTLKHGIEAML 219
Query: 182 QFYIPE 187
+ YI E
Sbjct: 220 KHYIEE 225
Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
MI EL+ TRIRP + +DGGDIQ+
Sbjct: 161 MIDELIQTRIRPAIMDDGGDIQY 183
>gi|410074389|ref|XP_003954777.1| hypothetical protein KAFR_0A02040 [Kazachstania africana CBS 2517]
gi|372461359|emb|CCF55642.1| hypothetical protein KAFR_0A02040 [Kazachstania africana CBS 2517]
Length = 254
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 91/162 (56%), Gaps = 17/162 (10%)
Query: 49 SPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT-- 105
S L + +F R GV+ + G DF+TV K D + W L P + + +SG V++
Sbjct: 71 SKLAQTIFARCPGVEEIMIGDDFLTVNK-DPMIHWNTLSPTVIEILTTHLASGDEVVSPE 129
Query: 106 -----DAQPSSDTV------IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+ + V +ED+ E ++I+EL+DTRIRP + EDGGDI + + +
Sbjct: 130 FRGVQELEGGGYNVNRMQFNYNEDEQEISELIEELIDTRIRPAILEDGGDIDYRGWDPKT 189
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNM 194
G V LK+QG+CTSC SS VTLK G+++ML+ Y+ E + M
Sbjct: 190 GTVYLKLQGACTSCSSSEVTLKYGIESMLKHYVDEVKEVIQM 231
Score = 38.1 bits (87), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 160 LIEELIDTRIRPAILEDGGDIDY 182
>gi|197106639|ref|YP_002132016.1| thioredoxin-like domain-containing protein [Phenylobacterium
zucineum HLK1]
gi|196480059|gb|ACG79587.1| thioredoxin-like domain protein [Phenylobacterium zucineum HLK1]
Length = 233
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 83/151 (54%), Gaps = 11/151 (7%)
Query: 42 TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGL 101
TG SPL LF + V+ V DF+TVT++ D W L+ + A I D SG
Sbjct: 33 TGFDPAASPLAARLFALGSVRHVLIAEDFVTVTRETDGEAWTTLRIKAIAEIADHLESGA 92
Query: 102 PVLTDAQPSSDTVIHEDDDETVQM---IKELLDTRIRPTVQEDGGDIQFISFQ--GGVVK 156
P + A +D D E Q+ I+++L +RP V DGGD+ F F+ GV+
Sbjct: 93 PAV--AAEGADP----PDPEESQVEGEIRQVLGLYVRPGVARDGGDVLFDRFEPDTGVLW 146
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++MQG+C CPSS +TLK G++ +++ Y+PE
Sbjct: 147 IRMQGACGGCPSSRLTLKAGIEQIVRRYVPE 177
>gi|325104464|ref|YP_004274118.1| Scaffold protein Nfu/NifU [Pedobacter saltans DSM 12145]
gi|324973312|gb|ADY52296.1| Scaffold protein Nfu/NifU [Pedobacter saltans DSM 12145]
Length = 183
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 91/152 (59%), Gaps = 6/152 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
++D+PT ++A S L++ V VFF +F+T+TK +D +W ++P + +F
Sbjct: 28 SVDYPTRESATESRFASELYKFSFVNGVFFASNFVTITK-SEDAEWADIEP----ILKEF 82
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQM-IKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
+ Q + + + V++ I+++L ++P V++DGG I + SF+ GVV
Sbjct: 83 VKGAVESEYAVQSKKEEEFVDFEGSEVEIKIQQILHDYVKPAVEQDGGAIAYKSFEDGVV 142
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++++GSC+ CPSS +TLK+G+Q++LQ +PE
Sbjct: 143 TVELRGSCSGCPSSTITLKSGIQSLLQRMVPE 174
>gi|323332794|gb|EGA74199.1| Nfu1p [Saccharomyces cerevisiae AWRI796]
Length = 224
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 18/156 (11%)
Query: 49 SPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI-------FATIMDFFSSG 100
S L + +F + GV+S+ G DF+T+ K D V W +KPEI A D S
Sbjct: 34 SKLAQQIFLQCPGVESLMIGDDFLTINK-DRMVHWNSIKPEIIDLLTKQLACGEDVISKE 92
Query: 101 LPVLTDAQPSSDTVIH-------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--Q 151
+ + + I+ E+D+E ++I+EL+DTRIRP + EDGGDI + + +
Sbjct: 93 FHAVQEEEGEGGYKINMPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPK 152
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L++QG+CTSC SS VTLK G+++ML+ Y+ E
Sbjct: 153 TGTVYLRLQGACTSCSSSEVTLKYGIESMLKHYVDE 188
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 124 LIEELIDTRIRPAILEDGGDIDY 146
>gi|367007230|ref|XP_003688345.1| hypothetical protein TPHA_0N01300 [Tetrapisispora phaffii CBS 4417]
gi|357526653|emb|CCE65911.1| hypothetical protein TPHA_0N01300 [Tetrapisispora phaffii CBS 4417]
Length = 265
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 22/164 (13%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL-- 104
+ L +L + GV+S+ G DF+TV K D+ V W + P + + + F+SG ++
Sbjct: 70 HSKTLTELFLKCPGVESLMIGDDFLTVNK-DEQVHWATVSPSVTEILTNHFASGSDIVDE 128
Query: 105 --------TDAQPSSDT---------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
T+ + D + ED+ E +MI EL+ TRIRP + +DGGDI +
Sbjct: 129 EFLKLLEQTEREKHKDVGYDIKLPEFEMTEDEQEISEMIHELIQTRIRPAIMDDGGDIVY 188
Query: 148 ISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
F + G V +K+QG+C SC SS TLK+G+++M++ Y+ E T
Sbjct: 189 RGFDPKTGKVYVKLQGACKSCSSSEDTLKHGIESMMKHYVEEVT 232
Score = 36.6 bits (83), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MI EL+ TRIRP + +DGGDI + F
Sbjct: 166 MIHELIQTRIRPAIMDDGGDIVYRGF 191
>gi|365759718|gb|EHN01493.1| Nfu1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 256
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 87/144 (60%), Gaps = 17/144 (11%)
Query: 60 GVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT-------DAQPSSD 112
GV+S+ G DF+T+ K D V W +KPEI + +SG V++ + +
Sbjct: 78 GVESLMIGDDFLTINK-DRMVHWNSIKPEIVDLLTKQLASGDDVISKEFHAVQEEEGEGG 136
Query: 113 TVIH-------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSC 163
I+ E+D+E ++I+EL+DTRIRP + EDGGDI + + + G V L++QG+C
Sbjct: 137 YKINMPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGAC 196
Query: 164 TSCPSSVVTLKNGVQNMLQFYIPE 187
TSC SS VTLK G+++ML+ Y+ E
Sbjct: 197 TSCSSSEVTLKYGIESMLKHYVDE 220
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 156 LIEELIDTRIRPAILEDGGDIDY 178
>gi|363752451|ref|XP_003646442.1| hypothetical protein Ecym_4593 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890077|gb|AET39625.1| hypothetical protein Ecym_4593 [Eremothecium cymbalariae
DBVPG#7215]
Length = 246
Score = 100 bits (248), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 109/197 (55%), Gaps = 19/197 (9%)
Query: 9 RIRPTVQEDGGDIQFISFQDGVLEEPG-QTIDFPTGQAAYC--SPLGKLLF-RIEGVKSV 64
I+ + ++FIS +L+E G ++I+ +PL +F + G++++
Sbjct: 17 HIKTATTPNENALKFISMDGELLQERGARSIEIKNTDEKLIKHAPLASRIFSQCPGIETL 76
Query: 65 FFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV-------LTDAQPSSDTVI-- 115
G DF+TV K D+ + W + P + + + +SG + + +++ D +
Sbjct: 77 MIGDDFLTVRK-DEMMHWNQVTPSVIDILTGYLASGKEMFHPEFYSVKESEIGYDVNVPK 135
Query: 116 ---HEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSV 170
ED+ E +MI+EL+ TRIRP + +DGGDI + + + G+V LK+QG+C SC SS
Sbjct: 136 FEYDEDEQEISEMIEELIQTRIRPAIMDDGGDIDYRGWDPETGIVYLKLQGACKSCSSSE 195
Query: 171 VTLKNGVQNMLQFYIPE 187
VTLK+G+++ML+ YI E
Sbjct: 196 VTLKSGIESMLKHYIDE 212
Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 19/23 (82%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
MI+EL+ TRIRP + +DGGDI +
Sbjct: 148 MIEELIQTRIRPAIMDDGGDIDY 170
>gi|213407222|ref|XP_002174382.1| NifU-like protein c [Schizosaccharomyces japonicus yFS275]
gi|212002429|gb|EEB08089.1| NifU-like protein c [Schizosaccharomyces japonicus yFS275]
Length = 183
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/92 (55%), Positives = 67/92 (72%), Gaps = 4/92 (4%)
Query: 100 GLPVL--TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVV 155
G PV+ T PS+DT I + D ETV MIKEL+D+ IRP++QEDGGD+++ F Q G V
Sbjct: 48 GEPVIDGTPFNPSADTQILDSDSETVAMIKELIDSSIRPSIQEDGGDLEYRGFDEQTGTV 107
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
LK++GSC +C SS +TLK+G+Q ML YIPE
Sbjct: 108 YLKLRGSCRTCASSEITLKSGIQQMLMHYIPE 139
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 23/26 (88%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKEL+D+ IRP++QEDGGD+++ F
Sbjct: 75 MIKELIDSSIRPSIQEDGGDLEYRGF 100
>gi|349579522|dbj|GAA24684.1| K7_Nfu1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 256
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 90/156 (57%), Gaps = 18/156 (11%)
Query: 49 SPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI-------FATIMDFFSSG 100
S L + +F + GV+S+ G DF+T+ K D V W +KPEI A D S
Sbjct: 66 SKLAQQIFLQCPGVESLMIGDDFLTINK-DRMVHWNSIKPEIIDLLTKQLACGEDVISKE 124
Query: 101 LPVLTDAQPSSDTVIH-------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--Q 151
+ + + I+ E+D+E ++I+EL+DTRIRP + EDGGDI + + +
Sbjct: 125 FHAVQEEEGEGGYKINMPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPK 184
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V L++QG+CTSC SS VTLK G+++ML+ Y+ E
Sbjct: 185 TGTVYLRLQGACTSCSSSEVTLKYGIESMLKHYVDE 220
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 156 LIEELIDTRIRPAILEDGGDIDY 178
>gi|323347797|gb|EGA82061.1| Nfu1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 256
Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 17/144 (11%)
Query: 60 GVKSVFFGHDFITVTKQDDDVDWKLLKPEI-------FATIMDFFSSGLPVLTDAQPSSD 112
GV+S+ G DF+T+ K D V W +KPEI A D S + + +
Sbjct: 78 GVESLMIGDDFLTINK-DRMVHWNSIKPEIIDLLTKQLAXGEDVISKEFHAVQEEEGEGG 136
Query: 113 TVIH-------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSC 163
I+ E+D+E ++I+EL+DTRIRP + EDGGDI + + + G V L++QG+C
Sbjct: 137 YKINMPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGAC 196
Query: 164 TSCPSSVVTLKNGVQNMLQFYIPE 187
TSC SS VTLK G+++ML+ Y+ E
Sbjct: 197 TSCSSSEVTLKYGIESMLKHYVDE 220
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 156 LIEELIDTRIRPAILEDGGDIDY 178
>gi|151941505|gb|EDN59868.1| nifu-like protein [Saccharomyces cerevisiae YJM789]
Length = 256
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 17/151 (11%)
Query: 53 KLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI-------FATIMDFFSSGLPVLT 105
++ + GV+S+ G DF+T+ K D V W +KPEI A D S +
Sbjct: 71 QIFLQCPGVESLMIGDDFLTINK-DRMVHWNSIKPEIIDLLTKQLACGEDVISKEFHAVQ 129
Query: 106 DAQPSSDTVIH-------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVK 156
+ + I+ E+D+E ++I+EL+DTRIRP + EDGGDI + + + G V
Sbjct: 130 EEEGEGGYKINMPKFELSEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVY 189
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L++QG+CTSC SS VTLK G+++ML+ Y+ E
Sbjct: 190 LRLQGACTSCSSSEVTLKYGIESMLKHYVDE 220
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 156 LIEELIDTRIRPAILEDGGDIDY 178
>gi|398364601|ref|NP_012884.3| Nfu1p [Saccharomyces cerevisiae S288c]
gi|549668|sp|P32860.2|NFU1_YEAST RecName: Full=NifU-like protein, mitochondrial; Flags: Precursor
gi|486050|emb|CAA81875.1| unnamed protein product [Saccharomyces cerevisiae]
gi|45269699|gb|AAS56230.1| YKL040C [Saccharomyces cerevisiae]
gi|190409786|gb|EDV13051.1| hypothetical protein SCRG_03979 [Saccharomyces cerevisiae RM11-1a]
gi|207343478|gb|EDZ70927.1| YKL040Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272476|gb|EEU07457.1| Nfu1p [Saccharomyces cerevisiae JAY291]
gi|259147796|emb|CAY81046.1| Nfu1p [Saccharomyces cerevisiae EC1118]
gi|285813219|tpg|DAA09116.1| TPA: Nfu1p [Saccharomyces cerevisiae S288c]
gi|365764622|gb|EHN06144.1| Nfu1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392298098|gb|EIW09196.1| Nfu1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 256
Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 17/144 (11%)
Query: 60 GVKSVFFGHDFITVTKQDDDVDWKLLKPEI-------FATIMDFFSSGLPVLTDAQPSSD 112
GV+S+ G DF+T+ K D V W +KPEI A D S + + +
Sbjct: 78 GVESLMIGDDFLTINK-DRMVHWNSIKPEIIDLLTKQLAYGEDVISKEFHAVQEEEGEGG 136
Query: 113 TVIH-------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSC 163
I+ E+D+E ++I+EL+DTRIRP + EDGGDI + + + G V L++QG+C
Sbjct: 137 YKINMPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGAC 196
Query: 164 TSCPSSVVTLKNGVQNMLQFYIPE 187
TSC SS VTLK G+++ML+ Y+ E
Sbjct: 197 TSCSSSEVTLKYGIESMLKHYVDE 220
Score = 38.5 bits (88), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 156 LIEELIDTRIRPAILEDGGDIDY 178
>gi|323354104|gb|EGA85950.1| Nfu1p [Saccharomyces cerevisiae VL3]
Length = 249
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 17/151 (11%)
Query: 53 KLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI-------FATIMDFFSSGLPVLT 105
++ + GV+S+ G DF+T+ K D V W +KPEI A D S +
Sbjct: 71 QIFLQCPGVESLMIGDDFLTINK-DRMVHWNSIKPEIIDLLTKQLAYGEDVISKEFHAVQ 129
Query: 106 DAQPSSDTVIH-------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVK 156
+ + I+ E+D+E ++I+EL+DTRIRP + EDGGDI + + + G V
Sbjct: 130 EEEGEGGYKINMPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVY 189
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L++QG+CTSC SS VTLK G+++ML+ Y+ E
Sbjct: 190 LRLQGACTSCSSSEVTLKYGIESMLKHYVDE 220
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 156 LIEELIDTRIRPAILEDGGDIDY 178
>gi|227536308|ref|ZP_03966357.1| nifU domain protein [Sphingobacterium spiritivorum ATCC 33300]
gi|300772344|ref|ZP_07082214.1| NifU domain protein [Sphingobacterium spiritivorum ATCC 33861]
gi|227243915|gb|EEI93930.1| nifU domain protein [Sphingobacterium spiritivorum ATCC 33300]
gi|300760647|gb|EFK57473.1| NifU domain protein [Sphingobacterium spiritivorum ATCC 33861]
Length = 184
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 89/151 (58%), Gaps = 14/151 (9%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
++D+P + A SP LF+ V VFF +F+T+TK DD V+W +I A + DF
Sbjct: 29 SLDYPNKEKAQESPFAFELFKFNFVTGVFFASNFVTITKSDD-VEWS----DIEAILKDF 83
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDD-----ETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
+ +++ + V H++D E I+++L +RP V++DGG I + SF
Sbjct: 84 VKGAV----ESELAVKEVHHDEDTNFEGTEVEVKIQQVLHDYVRPAVEQDGGAIHYKSFD 139
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
G+V ++++GSC+ CPSS +TLK+G++ +L+
Sbjct: 140 NGIVTVELRGSCSGCPSSTITLKSGIEGLLK 170
>gi|387790899|ref|YP_006255964.1| thioredoxin-like protein [Solitalea canadensis DSM 3403]
gi|379653732|gb|AFD06788.1| thioredoxin-like protein [Solitalea canadensis DSM 3403]
Length = 186
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 87/151 (57%), Gaps = 5/151 (3%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
DF T ++A SP + L++ V VFF +F+TVTK DW+ L P + +
Sbjct: 34 DFATKESAEDSPFARELYKFSFVDGVFFASNFVTVTKVAGS-DWEDLIPILKEFVKGAVE 92
Query: 99 SGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
S L ++ D + + + E + I+++L +RP V++DGG I F S+ GVV +
Sbjct: 93 SELKIVDDHKEE----VAFEGTEIEKKIQQILHDYVRPAVEQDGGAIHFKSYDEGVVTVV 148
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
++GSC+ CPSS +TLK G++N+L+ +P+ T
Sbjct: 149 LKGSCSGCPSSTITLKAGIENLLKRMVPDVT 179
>gi|4790|emb|CAA49299.1| YKL253 [Saccharomyces cerevisiae]
Length = 230
Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 87/151 (57%), Gaps = 17/151 (11%)
Query: 53 KLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI-------FATIMDFFSSGLPVLT 105
++ + GV+S+ G DF+T+ K D V W +KPEI A D S +
Sbjct: 71 QIFLQCPGVESLMIGDDFLTINK-DRMVHWNSIKPEIIDLLTKQLAYGEDVISKEFHAVQ 129
Query: 106 DAQPSSDTVIH-------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVK 156
+ + I+ E+D+E ++I+EL+DTRIRP + EDGGDI + + + G V
Sbjct: 130 EEEGEGGYKINMPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVY 189
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L++QG+CTSC SS VTLK G+++ML+ Y+ E
Sbjct: 190 LRLQGACTSCSSSEVTLKYGIESMLKHYVDE 220
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 156 LIEELIDTRIRPAILEDGGDIDY 178
>gi|442323584|ref|YP_007363605.1| NifU family protein [Myxococcus stipitatus DSM 14675]
gi|441491226|gb|AGC47921.1| NifU family protein [Myxococcus stipitatus DSM 14675]
Length = 188
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 79/141 (56%), Gaps = 3/141 (2%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
SPL + L + GV +V G +F+TVTK D+ +W L ++ T+ S+ LPV+ +A
Sbjct: 42 SPLARKLMDVRGVTAVMIGTNFVTVTKGDEG-EWDELNDQVMETLDTHLSADLPVVDEAA 100
Query: 109 PSSDTVIH--EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSC 166
++ E I+E+LD IRP V DGGDI F+ G+V L M+GSC C
Sbjct: 101 VAAARQAVSAEGGGSVEARIREVLDAEIRPAVAMDGGDITLDRFEDGIVYLHMKGSCAGC 160
Query: 167 PSSVVTLKNGVQNMLQFYIPE 187
PSS TLK G++ L+ IPE
Sbjct: 161 PSSTATLKMGIEGRLREIIPE 181
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
I+E+LD IRP V DGGDI F+DG+ L G P+ A
Sbjct: 120 IREVLDAEIRPAVAMDGGDITLDRFEDGIVYLHMKGSCAGCPSSTA 165
>gi|340057140|emb|CCC51482.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 261
Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 92/161 (57%), Gaps = 9/161 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFR--IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
GQ + P A+ PL + +F V SVF + ++T VDW ++ + +
Sbjct: 40 GQKCEVPHMGLAWVHPLSQGIFEQYPREVSSVFIAPRYTSITVHSH-VDWAGVEWSLSSF 98
Query: 93 I---MDFFSSGLPVLTDAQP-SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
I + F +S +P + D VIHE+D E +Q IKELL ++RP VQ DGGD++ +
Sbjct: 99 IGHYLVFTNSCIPAAPEHTVLEDDLVIHENDSEVLQCIKELLKEQVRPMVQRDGGDVKLL 158
Query: 149 SF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++ + GVV L + G+C +CPSS TLK+G++ +++ ++PE
Sbjct: 159 NYNEKSGVVSLALLGACRTCPSSQNTLKHGIERVMKHFLPE 199
>gi|345868571|ref|ZP_08820554.1| NifU related protein [Bizionia argentinensis JUB59]
gi|344047082|gb|EGV42723.1| NifU related protein [Bizionia argentinensis JUB59]
Length = 300
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 10/155 (6%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + A SPL LF VKSVF ++++VTK D +W+ + E+ I F
Sbjct: 132 TYEFTSIDEAKLSPLATELFHFPFVKSVFIEDNYVSVTKYDM-AEWETITMEVREYIRSF 190
Query: 97 FSSGLPVLT-DAQPSSDT------VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
+G +++ AQ S+ +E D+T + I +L+ I+P V DGG+IQF S
Sbjct: 191 IENGKEIVSAKAQQESNRTSEKLDATYETLDDTSKEIITILEEYIKPAVASDGGNIQFES 250
Query: 150 FQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
+ VK+ +QG+C+ CPSS +TLKNG++NML+
Sbjct: 251 YNPDTKTVKVILQGACSGCPSSTITLKNGIENMLK 285
Score = 40.8 bits (94), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
Q+ +F A SPL + LF++ VK V+ +FI + ++ D V+W ++ E+ I D
Sbjct: 29 QSFEFSNIDEAKNSPLAQQLFQLPFVKKVYISSNFIAI-ERFDIVEWSDVQEEVAEQIKD 87
Query: 96 FFSSGLPVLTD 106
+ +SG + +
Sbjct: 88 YLNSGAKAVKE 98
>gi|379730315|ref|YP_005322511.1| nitrogen-fixing NifU domain-containing protein [Saprospira grandis
str. Lewin]
gi|378575926|gb|AFC24927.1| nitrogen-fixing NifU domain protein [Saprospira grandis str. Lewin]
Length = 207
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 95/165 (57%), Gaps = 12/165 (7%)
Query: 34 PGQTIDFP---TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIF 90
P +T DF A SPL LF GV V+ ++F+T+TK + +W + E+
Sbjct: 35 PKRTADFKDEDRELAEEWSPLAAALFAQTGVNGVYICNNFVTITK-GHNFEWADIMLELK 93
Query: 91 ATIMDFFSSGLPVLTD-------AQPSSDTVIHEDDDETVQM-IKELLDTRIRPTVQEDG 142
+ I ++ G V+ D AQ + + +E ++ + + IK +L+T +RP V+ DG
Sbjct: 94 SFIKNYLQEGKAVVKDGFDEVQAAQKAEEEEHYEGEEAEIVVKIKNILETYVRPAVEMDG 153
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+I+F +++ G+V + MQG+C+ CPSS VTLK G++ ML+ IP+
Sbjct: 154 GNIEFKAYKDGIVSVVMQGACSGCPSSSVTLKTGIEGMLKRMIPQ 198
Score = 40.4 bits (93), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK +L+T +RP V+ DGG+I+F +++DG++
Sbjct: 137 IKNILETYVRPAVEMDGGNIEFKAYKDGIV 166
>gi|405355860|ref|ZP_11024972.1| NifU domain protein [Chondromyces apiculatus DSM 436]
gi|397091132|gb|EJJ21959.1| NifU domain protein [Myxococcus sp. (contaminant ex DSM 436)]
Length = 188
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 88/156 (56%), Gaps = 4/156 (2%)
Query: 35 GQTIDFPTGQAAYC-SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
G ++F + A SPL + L + GV +V G +F+TVTK D+ +W L E+ +T+
Sbjct: 27 GGAVNFTNLEEAKAKSPLARKLMDVRGVTAVMIGTNFVTVTKGDEG-EWDELNDEVMSTL 85
Query: 94 MDFFSSGLPVL-TDAQPSSDTVIHEDDDETVQ-MIKELLDTRIRPTVQEDGGDIQFISFQ 151
+S PV+ A ++ + +++ I+++LD+ IRP V DGGDI F+
Sbjct: 86 DTHLTSDEPVVDEAALAAAREAAGQGAGGSIEGRIQDILDSEIRPAVAMDGGDITLDRFE 145
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V L M+GSC CPSS TLK G++ L+ IPE
Sbjct: 146 DGIVYLHMKGSCAGCPSSTATLKMGIEGRLREMIPE 181
Score = 37.0 bits (84), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
I+++LD+ IRP V DGGDI F+DG+ L G P+ A
Sbjct: 120 IQDILDSEIRPAVAMDGGDITLDRFEDGIVYLHMKGSCAGCPSSTA 165
>gi|424841988|ref|ZP_18266613.1| thioredoxin-like protein [Saprospira grandis DSM 2844]
gi|395320186|gb|EJF53107.1| thioredoxin-like protein [Saprospira grandis DSM 2844]
Length = 207
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 95/165 (57%), Gaps = 12/165 (7%)
Query: 34 PGQTIDFP---TGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIF 90
P +T DF A SPL LF GV V+ ++F+T+TK + +W + E+
Sbjct: 35 PKRTADFKDEDRELAEEWSPLAAALFAQTGVNGVYICNNFVTITK-GHNFEWADIMLELK 93
Query: 91 ATIMDFFSSGLPVLTD-------AQPSSDTVIHEDDDETVQM-IKELLDTRIRPTVQEDG 142
+ + ++ G V+ D AQ + + +E ++ + + IK +L+T +RP V+ DG
Sbjct: 94 SFLKNYLQEGKAVIKDGFDEVQAAQKAEEEEHYEGEEAEIVVKIKNILETYVRPAVEMDG 153
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+I+F +++ G+V + MQG+C+ CPSS VTLK G++ ML+ IP+
Sbjct: 154 GNIEFKAYKDGIVSVVMQGACSGCPSSSVTLKTGIEGMLKRMIPQ 198
Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 25/30 (83%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
IK +L+T +RP V+ DGG+I+F +++DG++
Sbjct: 137 IKNILETYVRPAVEMDGGNIEFKAYKDGIV 166
>gi|406602464|emb|CCH46005.1| hypothetical protein BN7_5592 [Wickerhamomyces ciferrii]
Length = 238
Score = 96.7 bits (239), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 84/147 (57%), Gaps = 11/147 (7%)
Query: 49 SPLGKLLFRI-EGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD- 106
SPL +F+ + V+S+ G +FITV K D+ W + P I + + + ++
Sbjct: 64 SPLASKIFQYSKDVESLMIGSNFITVNK-DEFTHWNQVTPLIKTILENHIENNEDIIIAQ 122
Query: 107 -----AQPSSD---TVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK 158
QP D + E+D E +I EL++T+IRPT+QEDGGD+ F+ + G V ++
Sbjct: 123 SSNPAKQPHHDEHYAALSEEDQEISDLISELIETKIRPTIQEDGGDLIFMRYSEGKVYVQ 182
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYI 185
+QG+CTSC S TLK+G+Q ML YI
Sbjct: 183 LQGACTSCSLSDDTLKSGIQGMLNHYI 209
Score = 43.5 bits (101), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
+I EL++T+IRPT+QEDGGD+ F+ + +G
Sbjct: 149 LISELIETKIRPTIQEDGGDLIFMRYSEG 177
>gi|332664007|ref|YP_004446795.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
gi|332332821|gb|AEE49922.1| nitrogen-fixing NifU domain-containing protein [Haliscomenobacter
hydrossis DSM 1100]
Length = 212
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 87/156 (55%), Gaps = 18/156 (11%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSS----G 100
A SPL LF V+ V+ ++F+TV+K+ + +W P+I + DF + G
Sbjct: 53 ATEWSPLATALFDFPYVRGVYVSNNFVTVSKELN-YEW----PDIMLKLKDFIKNYIEEG 107
Query: 101 LPVLTDAQPSSDTVIHED---------DDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
++ + + I D + E VQ IKEL+DT ++P V+ DGG+I+F ++
Sbjct: 108 GELVKEGFAEHISKIEADRAGVAYTGDEAELVQKIKELIDTYVKPAVEMDGGNIEFKHYE 167
Query: 152 GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V + MQGSC+ CPSS VTLK G++ ML+ IP+
Sbjct: 168 NGKVFVLMQGSCSGCPSSTVTLKAGIEGMLKRMIPQ 203
Score = 38.5 bits (88), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 23/28 (82%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDG 29
IKEL+DT ++P V+ DGG+I+F +++G
Sbjct: 142 IKELIDTYVKPAVEMDGGNIEFKHYENG 169
>gi|350582315|ref|XP_003481243.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like [Sus scrofa]
Length = 255
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 41/60 (68%), Positives = 52/60 (86%)
Query: 55 LFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTV 114
LFRIEGVKSVFFG DFITVTK+ +++DW LLKP+I+ATIMDFF+SGLP++T+ PS +
Sbjct: 88 LFRIEGVKSVFFGPDFITVTKESEELDWNLLKPDIYATIMDFFASGLPLVTEETPSGEAA 147
>gi|323304101|gb|EGA57879.1| Nfu1p [Saccharomyces cerevisiae FostersB]
Length = 174
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 17/139 (12%)
Query: 65 FFGHDFITVTKQDDDVDWKLLKPEI-------FATIMDFFSSGLPVLTDAQPSSDTVIH- 116
G DF+T+ K D V W +KPEI A D S + + + I+
Sbjct: 1 MIGDDFLTINK-DRMVHWNSIKPEIIDLLTKQLAYXEDVISKEFHAVQEEEGEGGYKINM 59
Query: 117 ------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPS 168
E+D+E ++I+EL+DTRIRP + EDGGDI + + + G V L++QG+CTSC S
Sbjct: 60 PKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSS 119
Query: 169 SVVTLKNGVQNMLQFYIPE 187
S VTLK G+++ML+ Y+ E
Sbjct: 120 SEVTLKYGIESMLKHYVDE 138
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 74 LIEELIDTRIRPAILEDGGDIDY 96
>gi|407397419|gb|EKF27733.1| hypothetical protein MOQ_008533 [Trypanosoma cruzi marinkellei]
Length = 282
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 90/167 (53%), Gaps = 17/167 (10%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEG--VKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
G T + A+ PL +F G V SVF +++T + V+W L+ +
Sbjct: 61 GHTCEVAHRGLAWVHPLSNGIFEQYGQEVASVFIAPRHVSITVYPN-VEWSKLE----WS 115
Query: 93 IMDFFSSGLPVLTDAQPSS--------DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
I F L + + P++ D I E D E +Q IKELL ++RP VQ+DGGD
Sbjct: 116 ISSFIGHYLLFVNECVPAAKEYTLLEDDLRICEGDSEVLQCIKELLREQVRPMVQQDGGD 175
Query: 145 IQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
++ ++F + GVV L M G+C +CPSS TLK+G++ +++ ++PE T
Sbjct: 176 VKLLNFNEETGVVSLAMLGACRTCPSSSNTLKDGIERVMKHFLPEVT 222
Score = 38.1 bits (87), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD 28
IKELL ++RP VQ+DGGD++ ++F +
Sbjct: 157 IKELLREQVRPMVQQDGGDVKLLNFNE 183
>gi|363583052|ref|ZP_09315862.1| nitrogen-fixing NifU domain-containing protein [Flavobacteriaceae
bacterium HQM9]
Length = 308
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 27/192 (14%)
Query: 11 RPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDF 70
P+VQ +F++ + VL QT++F A +PL LF VK VF ++
Sbjct: 117 NPSVQ------KFVANKKLVL----QTLEFKNIDEAINAPLPTALFNFPFVKEVFLDDNY 166
Query: 71 ITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA--------------QPSSDTVIH 116
+++TK + V+W + EI + D+ G V+ +A +S +V+
Sbjct: 167 VSITKYER-VEWNDISNEIREFLRDYLEQGKDVVDEAYFKNSASTEATSVDNNASPSVMD 225
Query: 117 EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLK--MQGSCTSCPSSVVTLK 174
E+ DE + I ++D ++P V DGG+IQF + K+ +QG+C+ CPSS TLK
Sbjct: 226 ENLDEVSKQIITIIDEYVKPAVASDGGNIQFQEYDPSTQKVAVILQGACSGCPSSTFTLK 285
Query: 175 NGVQNMLQFYIP 186
NG++NML+ +P
Sbjct: 286 NGIENMLKEMLP 297
>gi|323336723|gb|EGA77987.1| Nfu1p [Saccharomyces cerevisiae Vin13]
Length = 174
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 79/139 (56%), Gaps = 17/139 (12%)
Query: 65 FFGHDFITVTKQDDDVDWKLLKPEI-------FATIMDFFSSGLPVLTDAQPSSDTVIH- 116
G DF+T+ K D V W +KPEI A D S + + + I+
Sbjct: 1 MIGDDFLTINK-DRMVHWNSIKPEIIDLLTKQLAXGEDVISKEFHAVQEEEGEGGYKINM 59
Query: 117 ------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPS 168
E+D+E ++I+EL+DTRIRP + EDGGDI + + + G V L++QG+CTSC S
Sbjct: 60 PKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSS 119
Query: 169 SVVTLKNGVQNMLQFYIPE 187
S VTLK G+++ML+ Y+ E
Sbjct: 120 SEVTLKYGIESMLKHYVDE 138
Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 74 LIEELIDTRIRPAILEDGGDIDY 96
>gi|344203208|ref|YP_004788351.1| nitrogen-fixing NifU domain-containing protein [Muricauda
ruestringensis DSM 13258]
gi|343955130|gb|AEM70929.1| nitrogen-fixing NifU domain-containing protein [Muricauda
ruestringensis DSM 13258]
Length = 307
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 87/154 (56%), Gaps = 9/154 (5%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F A SPL LF + VK VF ++++VTK + DW+ + ++ I D+
Sbjct: 140 TYEFKNIDEAKDSPLAIELFHLPFVKEVFMDENYVSVTKYEV-ADWEEINMQLREFIRDY 198
Query: 97 FSSGLPVLTDA--QPSSDTV----IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
+ G V+T Q S +TV + D D+T I ++L+ ++P V DGG+I F S+
Sbjct: 199 LADGKDVVTAEAIQKSKETVEQKTVQTDYDDTSLQIIDILEEYVKPAVASDGGNILFQSY 258
Query: 151 --QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
Q G V + +QG+C+ CPSS TLKNG++ ML+
Sbjct: 259 EEQSGTVSVILQGACSGCPSSTFTLKNGIETMLK 292
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT 105
A SPL + LF + +K+V+ +F+ + K D V+W +K E+ ++++ ++G PV+
Sbjct: 47 AKNSPLAQQLFYLPFIKTVYIASNFVALEKFDI-VEWDDVKDEVAQQLVEYLNAGEPVVN 105
Query: 106 --DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
D + ++ + ++K + + RI P+ E
Sbjct: 106 EEDIKKKQPITVYAEVTPNPAVMKFVSNKRIVPSTYE 142
>gi|338532886|ref|YP_004666220.1| NifU family protein [Myxococcus fulvus HW-1]
gi|337258982|gb|AEI65142.1| NifU family protein [Myxococcus fulvus HW-1]
Length = 188
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 82/145 (56%), Gaps = 3/145 (2%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
A SPL + L + GV +V G F+TVTK ++ +W L E+ +T+ ++ PV+
Sbjct: 38 AQVKSPLARKLMDVRGVTAVMIGTHFVTVTKGEEG-EWDELNDEVMSTLDTHLTANEPVV 96
Query: 105 -TDAQPSSDTVIHEDDDETVQ-MIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGS 162
A ++ + +V+ I+++LD+ IRP V DGGDI F+ G+V L M+GS
Sbjct: 97 DEAALAAAREAAGQGAGGSVEGRIQDILDSEIRPAVAMDGGDITLDRFEDGIVYLHMKGS 156
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPE 187
C CPSS TLK G++ L+ IPE
Sbjct: 157 CAGCPSSTATLKMGIEGRLREMIPE 181
Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGV--LEEPGQTIDFPTGQA 45
I+++LD+ IRP V DGGDI F+DG+ L G P+ A
Sbjct: 120 IQDILDSEIRPAVAMDGGDITLDRFEDGIVYLHMKGSCAGCPSSTA 165
>gi|402494467|ref|ZP_10841208.1| nitrogen-fixing NifU domain-containing protein [Aquimarina
agarilytica ZC1]
Length = 307
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 18/167 (10%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
QT++F A +PL LF VK VF +++++TK D V+W + EI + D
Sbjct: 132 QTLEFKNIDEAIDAPLPTALFNFPFVKEVFLDDNYVSITKYDR-VEWNDISNEIREFLRD 190
Query: 96 FFSSGLPVL------TDAQPSSDTVIHED--------DDETVQMIKELLDTRIRPTVQED 141
+ G V+ T + +S+ V +E DD + Q+I ++D ++P V D
Sbjct: 191 YLEQGKEVIKEEAFKTQSSETSNEVANESSYVNDENLDDVSKQIIA-IIDEYVKPAVASD 249
Query: 142 GGDIQFISFQGGVVKLK--MQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
GG+IQF ++ K++ +QG+C+ CPSS TLKNG++NML+ +P
Sbjct: 250 GGNIQFQNYDATTQKVEVILQGACSGCPSSTFTLKNGIENMLKEMLP 296
Score = 42.7 bits (99), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ +F + A SPL + LF + VK ++ +F+ + K D V+W ++ E+ I +
Sbjct: 30 SYEFENIEEAKISPLAQQLFHLPFVKQIYIAQNFVAINKYDI-VEWADVQREVAEQIEAY 88
Query: 97 FSSGLPVLTDAQPSSDTV 114
+ G PV+ SS V
Sbjct: 89 LNEGHPVIDVVNTSSKKV 106
>gi|313220326|emb|CBY31182.1| unnamed protein product [Oikopleura dioica]
Length = 140
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP + AY SPL K +F ++GVK FFG DF+T+ + D+ DW ++K E+FA +
Sbjct: 40 GATCDFPDIREAYKSPLAKRIFAVDGVKGCFFGPDFVTIIRHDETDDWPVMKAELFAVLT 99
Query: 95 DFFSSGLPVLT-DAQPSSDTVIHEDD 119
DFF S LP++ DA P+ DT+I++DD
Sbjct: 100 DFFDSNLPIINEDALPNQDTIIYDDD 125
>gi|313230548|emb|CBY18764.1| unnamed protein product [Oikopleura dioica]
Length = 140
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP + AY SPL K +F ++GVK FFG DF+T+ + D+ DW ++K E+FA +
Sbjct: 40 GATCDFPDIREAYKSPLAKRIFAVDGVKGCFFGPDFVTIIRHDETDDWPVMKAELFAVLT 99
Query: 95 DFFSSGLPVLT-DAQPSSDTVIHEDD 119
DFF S LP++ DA P+ DT+I++DD
Sbjct: 100 DFFDSNLPIINEDALPNQDTIIYDDD 125
>gi|330813331|ref|YP_004357570.1| hypothetical protein SAR11G3_00356 [Candidatus Pelagibacter sp.
IMCC9063]
gi|327486426|gb|AEA80831.1| hypothetical protein SAR11G3_00356 [Candidatus Pelagibacter sp.
IMCC9063]
Length = 179
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 64 VFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETV 123
++ +F+T+ K+ DW +K I + + ++ L+ + E DE
Sbjct: 53 IYIDSNFVTIKKKSSQ-DWNEIKENILKILSEEVNADFEALSFEKS------FEFKDEIS 105
Query: 124 QMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQF 183
Q I+E+L+ +IRP V DGGDIQ S++ G+V++ ++GSC CPSS VTLK GV+ M++
Sbjct: 106 QRIEEVLNDKIRPAVAMDGGDIQLKSYKDGIVEVMLKGSCAGCPSSTVTLKQGVERMIKH 165
Query: 184 YIPETTP--GLNME 195
Y+PE +N+E
Sbjct: 166 YVPEVNSVIAVNIE 179
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I+E+L+ +IRP V DGGDIQ S++DG++E
Sbjct: 108 IEEVLNDKIRPAVAMDGGDIQLKSYKDGIVE 138
>gi|108761437|ref|YP_634156.1| NifU family protein [Myxococcus xanthus DK 1622]
gi|108465317|gb|ABF90502.1| NifU family protein [Myxococcus xanthus DK 1622]
Length = 188
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 18/163 (11%)
Query: 35 GQTIDFPTGQAAYC-SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
G ++F + A SPL + L + GV +V G +F+TVTK ++ +W L E+ + +
Sbjct: 27 GGAVNFTNPEDAQAKSPLARKLMDVRGVTAVMIGTNFVTVTKGEEG-EWDELNDEVMSAL 85
Query: 94 MDFFSSGLPVL---------TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
++ PV+ A PS + I+++LD IRP V DGGD
Sbjct: 86 DTHLTANEPVVDEAALAAAREAAGPSGGGTVE-------GRIQDILDNEIRPAVAMDGGD 138
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
I F+ G+V L M+G+C CPSS TLK G++ L+ IPE
Sbjct: 139 ITLDRFEDGIVYLHMKGACAGCPSSTATLKMGIEGRLREMIPE 181
Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+++LD IRP V DGGDI F+DG++
Sbjct: 120 IQDILDNEIRPAVAMDGGDITLDRFEDGIV 149
>gi|294901264|ref|XP_002777311.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239884853|gb|EER09127.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 299
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 23/180 (12%)
Query: 22 QFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITV-TKQDDDV 80
+F+ F G T + +++C + K L ++GV V G F+++ +
Sbjct: 8 KFMEFSSGARRSATYTTE-----SSFCPRVAKELLEVKGVDKVTVGDGFLSIIASRPSGR 62
Query: 81 DWKLLKPEI--FATIMD-------FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLD 131
++ + ++ F +I+D + SG +T+ PSS + +E + I+ LLD
Sbjct: 63 EFAFAEEQLAAFKSILDKAAVEPENYLSGDSTVTERAPSSSS------NEVEERIQSLLD 116
Query: 132 TRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
TR+RP + +DGGD +FISF Q G V L + GSC CP SV TLK+ ++ L+FY+ E +
Sbjct: 117 TRVRPVIAQDGGDCEFISFDSQTGRVTLALHGSCEGCPQSVKTLKDSIERTLKFYVEEVS 176
Score = 41.6 bits (96), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
I+ LLDTR+RP + +DGGD +FISF
Sbjct: 111 IQSLLDTRVRPVIAQDGGDCEFISF 135
>gi|149036648|gb|EDL91266.1| histone cell cycle regulation defective interacting protein 5
(predicted), isoform CRA_b [Rattus norvegicus]
Length = 79
Score = 92.8 bits (229), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 49/53 (92%)
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
RPTVQEDGGD+ + F+ G+V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 6 RPTVQEDGGDVIYRGFEDGIVRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 58
>gi|326334857|ref|ZP_08201058.1| nitrogen-fixing NifU domain protein [Capnocytophaga sp. oral taxon
338 str. F0234]
gi|325692894|gb|EGD34832.1| nitrogen-fixing NifU domain protein [Capnocytophaga sp. oral taxon
338 str. F0234]
Length = 295
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 85/160 (53%), Gaps = 21/160 (13%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+ ++ + Q A SPL LF+ VK VFF ++I+V +Q + W+ + E+ I
Sbjct: 131 SRVYEYKSAQEAAESPLAAALFKFPYVKEVFFDSNYISVIRQPK-ILWEEVMMELREFIR 189
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDE----------TVQMIKELLDTRIRPTVQEDGGD 144
+ +G PV+ VI ED D + I +LD I+P V DGG+
Sbjct: 190 QYLMAGKPVVR--------VIVEDGDRPKGLPTLNDIYSRKIIAILDQYIKPAVSSDGGN 241
Query: 145 IQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
IQF+S+ + VVK+ MQG+C CPSS +TLK G++ +L+
Sbjct: 242 IQFVSYDKESQVVKVLMQGACNGCPSSKLTLKQGIEAILR 281
>gi|262277769|ref|ZP_06055562.1| NifU domain protein [alpha proteobacterium HIMB114]
gi|262224872|gb|EEY75331.1| NifU domain protein [alpha proteobacterium HIMB114]
Length = 179
Score = 92.4 bits (228), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 80/135 (59%), Gaps = 7/135 (5%)
Query: 55 LFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTV 114
LF I+ ++ V+ +FI++ K++ D W + +I + S L+ + S T
Sbjct: 43 LFLIKELELVYLDKNFISI-KKNKDSSWDDIVQDILEALNKRISQNFDALSFEEESEFT- 100
Query: 115 IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLK 174
D+ + I+E+L+ +IRP V DGGDI+ SF+ GV ++ ++G+C CPSS VTLK
Sbjct: 101 -----DDISKRIEEVLNDKIRPAVAMDGGDIRLKSFKDGVAEVMLKGACAGCPSSTVTLK 155
Query: 175 NGVQNMLQFYIPETT 189
+GV+ M++ Y+PE T
Sbjct: 156 HGVERMIKHYVPEVT 170
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
I+E+L+ +IRP V DGGDI+ SF+DGV E
Sbjct: 107 IEEVLNDKIRPAVAMDGGDIRLKSFKDGVAE 137
>gi|336172539|ref|YP_004579677.1| nitrogen-fixing NifU domain-containing protein [Lacinutrix sp.
5H-3-7-4]
gi|334727111|gb|AEH01249.1| nitrogen-fixing NifU domain-containing protein [Lacinutrix sp.
5H-3-7-4]
Length = 300
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 85/153 (55%), Gaps = 10/153 (6%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F T A SPL LF + VKSVF ++++VTK D +W+ + E+ I +
Sbjct: 134 EFVTIDDAKPSPLATELFHLPFVKSVFIDENYVSVTKYDV-AEWQEITNELREFIRSYIE 192
Query: 99 SGLPVLTDAQPSS------DTVIH-EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
G +++ P + + H E D+T + I +L+ ++P V DGG+IQF S+
Sbjct: 193 DGKEIISANAPEAIEKSTKNVDAHFETLDDTSKEIVNILEEYVKPAVASDGGNIQFESYN 252
Query: 152 G--GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
VK+ +QG+C+ CPSS TLKNG++NML+
Sbjct: 253 ADTKTVKVILQGACSGCPSSTFTLKNGIENMLK 285
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 8 TRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFG 67
T + T+QE + I F+ Q+ +F A SPL + LF + VK V+
Sbjct: 2 TPFQVTIQETSNN-SIIKFELNQFITQHQSFEFNNIDEAKESPLAQELFYLPFVKKVYIT 60
Query: 68 HDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPS 110
+FI + ++ + V+WK ++ E+ I + + G V+T+ S
Sbjct: 61 SNFIAI-ERFNIVEWKDVQDEVSEQIKAYLNKGGIVITENATS 102
>gi|361124828|gb|EHK96895.1| putative NifU-like protein [Glarea lozoyensis 74030]
Length = 132
Score = 92.4 bits (228), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 101 LPVLTDAQPSSDTVIHEDDD-ETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
+ V+ D D++ ++++D E V MIKELL+TRIRP +Q+DGGDI + F+ G V +K+
Sbjct: 2 VNVVGDQAGQVDSLSYDENDPEVVGMIKELLETRIRPAIQDDGGDIDYCGFEDGQVLVKL 61
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
+GSC C SS VTLKNG++ ML YI E
Sbjct: 62 RGSCDGCASSAVTLKNGIEGMLMHYIEEV 90
Score = 49.3 bits (116), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/29 (68%), Positives = 25/29 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
MIKELL+TRIRP +Q+DGGDI + F+DG
Sbjct: 27 MIKELLETRIRPAIQDDGGDIDYCGFEDG 55
>gi|325286802|ref|YP_004262592.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
gi|324322256|gb|ADY29721.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga lytica
DSM 7489]
Length = 300
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F + A S L LF+ VK VF ++I+VTK D+ DW + E+ +I F +
Sbjct: 134 EFKNKEEAKDSDLATTLFQFPYVKEVFLDENYISVTKTDE-ADWNEITLELRESIQAFLT 192
Query: 99 SGLPVLT------DAQPSSDTVIHEDD-DETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
G V++ Q + T + +++ D+T + I ++L+ ++P V DGG+I F S+
Sbjct: 193 EGKEVVSANSISKQKQEAPATQLQDENLDDTSKQIIDILEEYVKPAVASDGGNIMFKSYD 252
Query: 152 GGVVKLK--MQGSCTSCPSSVVTLKNGVQNMLQ 182
K+ +QG+C+ CPSS TLKNG++NML+
Sbjct: 253 ENTKKVNVILQGACSGCPSSTFTLKNGIENMLK 285
Score = 36.2 bits (82), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 43/86 (50%), Gaps = 12/86 (13%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+ ++ A SPL + LF + +K+V+ +FI + ++ D V W ++ E+ ++
Sbjct: 28 NNSYEYKNIDEAKNSPLAQQLFYLPFIKTVYISGNFIAL-ERFDIVAWDDVRDEVAQQLV 86
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDD 120
D+ +SG + V+HE +D
Sbjct: 87 DYLNSG-----------EVVVHEQED 101
>gi|399029207|ref|ZP_10730228.1| thioredoxin-like protein [Flavobacterium sp. CF136]
gi|398072996|gb|EJL64185.1| thioredoxin-like protein [Flavobacterium sp. CF136]
Length = 299
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 10/144 (6%)
Query: 48 CSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
SPL K LF+ VK VF ++I+VTK D + DW+ + E+ I F +G VL ++
Sbjct: 142 SSPLAKELFKFPYVKEVFIDENYISVTKYDIN-DWQEITLEVRTFIKQFIENGGTVLDES 200
Query: 108 --QPSSDTVIHEDD-----DETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKLK 158
+ ++ + +D+ D T Q I +L+ ++P V DGG+I F S+ VVK+
Sbjct: 201 LIEVTTKNDVTKDEAFDKLDVTSQQIINILEEYVKPAVAADGGNIAFDSYNETDKVVKVI 260
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQ 182
+QG+C+ CPSS TLK+G++NML+
Sbjct: 261 LQGACSGCPSSTFTLKSGIENMLK 284
>gi|198414946|ref|XP_002131248.1| PREDICTED: similar to NFU1 iron-sulfur cluster scaffold homolog
(HIRA-interacting protein 5) [Ciona intestinalis]
Length = 201
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVD--WKLLKPEIFATI 93
Q I + + Y SPL + + +I+G++SV I V K D + W +KP I AT+
Sbjct: 16 QKIKYHSRHPCYHSPLVRQIMKIDGIESVTLFTKHIHVQKNTDTLSPQWSSIKPIIVATL 75
Query: 94 MDFFSSGLPVLTDAQP--------SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI 145
++FF+S LP T Q S + V + D+ +I +L+++RIRPTVQ++GGD+
Sbjct: 76 INFFASQLPTTTHHQSKRLHYHKESGECVAYGKLDDIEYVIDDLINSRIRPTVQDEGGDV 135
Query: 146 QFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+ F G V + + GSC P + + + +LQ+++P T
Sbjct: 136 IYKDFNRGNGTVYVLLLGSCLYTPKATNAITSATLLLLQYHVPCVT 181
Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDG 29
+I +L+++RIRPTVQ++GGD+ + F G
Sbjct: 115 VIDDLINSRIRPTVQDEGGDVIYKDFNRG 143
>gi|374599800|ref|ZP_09672802.1| nitrogen-fixing NifU domain-containing protein [Myroides odoratus
DSM 2801]
gi|423324957|ref|ZP_17302798.1| hypothetical protein HMPREF9716_02155 [Myroides odoratimimus CIP
103059]
gi|373911270|gb|EHQ43119.1| nitrogen-fixing NifU domain-containing protein [Myroides odoratus
DSM 2801]
gi|404606966|gb|EKB06500.1| hypothetical protein HMPREF9716_02155 [Myroides odoratimimus CIP
103059]
Length = 299
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 10/156 (6%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
Q ++F A SPL K LF++ V+ VF ++++++K + DW + I +
Sbjct: 130 QGVEFKNIDEAKSSPLAKELFKLPFVREVFIDENYVSISKYEA-FDWNEFIQSTRSFIKE 188
Query: 96 FFSSGLPVLTDA------QPSSDTVIHEDD-DETVQMIKELLDTRIRPTVQEDGGDIQFI 148
F G + +A + IH D DE Q I +L+ ++P VQ DGG+I F
Sbjct: 189 FLEKGNLAVDEALVTNVEELEKQADIHFDSLDEKSQRIINILEENVKPAVQADGGNIAFQ 248
Query: 149 SFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
++ VV++ +QG+C+ CPSS TLKNG++NML+
Sbjct: 249 NYNEDTNVVQVILQGACSGCPSSTFTLKNGIENMLR 284
>gi|225011341|ref|ZP_03701795.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
gi|225004524|gb|EEG42492.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-3C]
Length = 301
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 86/153 (56%), Gaps = 10/153 (6%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F A +PL K LF + VK VF ++I+VTK D +W+ + E+ I F
Sbjct: 135 EFKNIDEAKDAPLAKELFLMPFVKEVFMDQNYISVTKYDV-AEWEEINNELREKIRLFLM 193
Query: 99 SGLP------VLTDAQPSSDTVIHEDD-DETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
SG V + + + T++H D+ D+T + I ++L+ ++P V DGG+I F S+
Sbjct: 194 SGQESVGANTVQKEKEKAPTTLLHTDNLDDTSKQIVDILEEYVKPAVASDGGNIMFDSYD 253
Query: 152 --GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
V + +QG+C+ CPSS TLKNG++NML+
Sbjct: 254 EVSKTVNVILQGACSGCPSSTFTLKNGIENMLK 286
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 22 QFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVD 81
+ F+ P + +F A SPL + LF + VK+V+ +FI + K D V
Sbjct: 16 NIMKFETNHFISPDKNYEFQNIDQAKESPLAQQLFHLPFVKTVYISSNFIGIEKY-DIVG 74
Query: 82 WKLLKPEIFATIMDFFSSGLPVLT 105
W+ +K + ++D+ ++G V+
Sbjct: 75 WEDIKDSLGQQLVDYLNTGAAVVA 98
>gi|88802135|ref|ZP_01117663.1| NifU protein [Polaribacter irgensii 23-P]
gi|88782793|gb|EAR13970.1| NifU protein [Polaribacter irgensii 23-P]
Length = 301
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A+ SPL + +F V+ VF ++I+VTK D V+W + E+ I ++ + G +
Sbjct: 140 EASASSPLAQAIFNFPFVQQVFISDNYISVTKYDM-VEWNEVYGEVRTFIREYLADGKTI 198
Query: 104 LTDAQPSSDTVIHEDDDETVQMIKE--------LLDTRIRPTVQEDGGDIQFISF--QGG 153
+ + P + V + + +++ E +LD I+P V DGG+I F S+ Q
Sbjct: 199 IKEL-PKEEVVETANKAQEPEVVLEGISAQIVDILDEYIKPAVASDGGNIAFRSYDEQTK 257
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VV++ +QG+C+ CPSS TLKNG++N+L+ +P+
Sbjct: 258 VVRVILQGACSGCPSSTATLKNGIENLLKEMLPD 291
Score = 40.4 bits (93), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 5 LLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSV 64
+LDT+I T+QE + I + + G + +F A SPL + LF + VK V
Sbjct: 1 MLDTKI--TIQETTNN-TIIKYNSNTILINGGSYEFNNIDEAKNSPLAQELFYLPFVKKV 57
Query: 65 FFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIH 116
F +FI + ++ D ++W ++ E+ I F + G V+ + + S I
Sbjct: 58 FITANFIAI-QRFDILEWIDVQEEVKEQIEAFLNDGNIVVNEQKTSKKEAIE 108
>gi|145544593|ref|XP_001457981.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425800|emb|CAK90584.1| unnamed protein product [Paramecium tetraurelia]
Length = 196
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 75/130 (57%), Gaps = 9/130 (6%)
Query: 60 GVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLP------VLTDAQPSSDT 113
GV F+G D+I+++K+++ W L+ IF I D + S + + + D+
Sbjct: 49 GVTREFYGMDYISISKKNES-KWDDLRSRIFEQIFDQYESNQEGSEKQFLFEGFKQNKDS 107
Query: 114 VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKLKMQGSCTSCPSSVV 171
VI +DD + +Q+IK++L+ RIRP QE GGDI F F G++ L +GSC CP++
Sbjct: 108 VIQDDDSKPIQLIKDILNHRIRPDFQEIGGDIVFREFDELNGILYLYKKGSCVECPATAT 167
Query: 172 TLKNGVQNML 181
TLKN + ML
Sbjct: 168 TLKNRFEKML 177
>gi|428180611|gb|EKX49478.1| hypothetical protein GUITHDRAFT_136139 [Guillardia theta CCMP2712]
Length = 237
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 88/152 (57%), Gaps = 15/152 (9%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW--------KLLKPEIFATIMD 95
Q + + + LF ++GV+++ FG DFITV K D + +W ++L+ E+ A D
Sbjct: 69 QDQHLAHIATQLFAVKGVRTLLFGPDFITVVK-DPETEWAETEELLMQILQEELNAARQD 127
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
P+ +Q S + +I D++ I ELL+ ++ P V+ DGGD+QF F+ GVV
Sbjct: 128 C----RPLAKISQESINQLIASKFDQS--QILELLEEKVAPHVRADGGDVQFRGFKDGVV 181
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
L + G+CTSC SS VT++ ++N+L Y+ E
Sbjct: 182 WLSLVGACTSCSSSTVTVRFMIRNLLMHYMDE 213
Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I ELL+ ++ P V+ DGGD+QF F+DGV+
Sbjct: 152 ILELLEEKVAPHVRADGGDVQFRGFKDGVV 181
>gi|339483427|ref|YP_004695213.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. Is79A3]
gi|338805572|gb|AEJ01814.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. Is79A3]
Length = 186
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 87/171 (50%), Gaps = 22/171 (12%)
Query: 30 VLEEP---GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
+L+EP G + +AA PL LF I+ V +VF+ +ITVT QD + +W+ L
Sbjct: 19 ILKEPLTWGIARSYDNAEAAQDDPLAAALFDIDHVTNVFYIDHWITVT-QDGEANWQDLA 77
Query: 87 PEIFATI----------MDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRP 136
EI I + ++ VL D P +D ++ I LLD +RP
Sbjct: 78 REIADPIRAAPAASAQSAETVAAASNVLADLSP--------EDQLRLEKINVLLDEEVRP 129
Query: 137 TVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+Q DGGD+ + +G V+++ QG+C +CPSS+ G++NML+ P+
Sbjct: 130 YLQHDGGDLHILGLEGNVLRIHYQGACGTCPSSISGTLKGIENMLKTIEPD 180
>gi|390953613|ref|YP_006417371.1| thioredoxin-like protein [Aequorivita sublithincola DSM 14238]
gi|390419599|gb|AFL80356.1| thioredoxin-like protein [Aequorivita sublithincola DSM 14238]
Length = 306
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 16/159 (10%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F A SPL K LF VK VF ++I+V K D V+W+ L EI I F
Sbjct: 134 EFKNSDEATNSPLAKALFNFPFVKEVFISSNYISVMKHDW-VEWQDLTMEIREFIRKFIE 192
Query: 99 SGLPVL----------TDAQPSSDTVIHEDDDETVQMIKEL---LDTRIRPTVQEDGGDI 145
G VL +++ S++ + ++ ++ KE+ LD ++P V DGG I
Sbjct: 193 DGKSVLNEEASAKTTPSESISSTENTLDQNQKPHTELEKEIISILDEYVKPAVARDGGHI 252
Query: 146 QFISFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
F SF VK+ +QG+C+ CPSS +TLKNG++ ML+
Sbjct: 253 LFDSFNETTKTVKVILQGACSGCPSSTITLKNGIETMLK 291
Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P + +F A SPL + LF + VK+V+ +FI + K D ++WK ++ E+ +I
Sbjct: 27 PSTSYEFKNIDEAKASPLAQQLFYLPFVKTVYISQNFIAIEKY-DILEWKDVQEEVADSI 85
Query: 94 MDFFSSGLPVLTD 106
++ +SG V+T+
Sbjct: 86 AEYLNSGKSVITE 98
>gi|163786509|ref|ZP_02180957.1| thioredoxin-related protein [Flavobacteriales bacterium ALC-1]
gi|159878369|gb|EDP72425.1| thioredoxin-related protein [Flavobacteriales bacterium ALC-1]
Length = 300
Score = 90.1 bits (222), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 88/153 (57%), Gaps = 10/153 (6%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F + + A SPL LF+ +K++F +FI++TK D ++W+ + ++ + +
Sbjct: 134 EFTSIEEAKPSPLATALFQFPFIKNIFIEKNFISITKFDI-IEWEDITLQLREFLKSYIE 192
Query: 99 SGLPVLTDAQP----SSDTVIH---EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
G +L D P ++ I E D+T + I +L+ I+P V+ DGG+I+F S+
Sbjct: 193 DGKTILNDDAPQKLNKTEEAIEQKFEALDDTSKNIVNILEEYIKPAVESDGGNIEFKSYD 252
Query: 152 GGVVKLK--MQGSCTSCPSSVVTLKNGVQNMLQ 182
K++ +QG+C+ CPSS TLKNG++NML+
Sbjct: 253 ANTKKVEVLLQGACSGCPSSTFTLKNGIENMLK 285
Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+ +F A SPL + LF + VK V+ +FI + + + V+WK ++ E+ A I D
Sbjct: 29 NSFEFNNIDDAKHSPLAQQLFYLPFVKKVYIATNFIAIERY-NIVEWKDVQNEVAAQIED 87
Query: 96 FFSSGLPVLTDA--QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
+ S+ V+T+ +P + ++ + ++K + + + P++ E
Sbjct: 88 YLSNDGVVVTEEAIKPKAAVTVYAESTPNPSVLKFVCNKVLVPSLYE 134
>gi|340621897|ref|YP_004740349.1| NifU-like protein 4 [Capnocytophaga canimorsus Cc5]
gi|339902163|gb|AEK23242.1| NifU-like protein 4 [Capnocytophaga canimorsus Cc5]
Length = 295
Score = 89.7 bits (221), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F + A SPL LF VK VF ++I+VTK D DW + E+ I + +
Sbjct: 133 EFKSIDEAKASPLALALFHFPFVKEVFIDENYISVTKYDI-ADWNDITMELREFIRNHIA 191
Query: 99 SGLPVLTDAQPSSDTVIHED---DDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGG 153
G V+ ++ T ++ D Q I ++++ ++P V DGG+I F+S+ Q
Sbjct: 192 QGKDVIAASEVEKRTNEKQEAKTTDAVSQQIMDIIEEYVKPAVASDGGNIHFLSYDAQTH 251
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
+V++ +QG+C+ CPSS TLKNG++ ML+
Sbjct: 252 LVQVMLQGACSGCPSSTFTLKNGIETMLR 280
>gi|332291487|ref|YP_004430096.1| nitrogen-fixing NifU domain-containing protein [Krokinobacter sp.
4H-3-7-5]
gi|332169573|gb|AEE18828.1| nitrogen-fixing NifU domain protein [Krokinobacter sp. 4H-3-7-5]
Length = 300
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 82/147 (55%), Gaps = 10/147 (6%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
+P+ K LF + VK VFF ++I+V K D +W + E I D+ G ++T AQ
Sbjct: 144 APMAKALFHLPYVKEVFFDENYISVQKYDV-AEWDEVVTETREFIRDYIQDGKEIVTAAQ 202
Query: 109 ---PSSDTVIHEDDDETV----QMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKM 159
P I E+ ET+ + I +++ ++P V DGG+I F ++ + V + +
Sbjct: 203 LKTPQQAEAIAEEKFETLDDISKEIVNIIEEYVKPAVASDGGNIMFKNYDPKTQNVSVIL 262
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIP 186
QG+C+ CPSS TLKNG++NML+ +P
Sbjct: 263 QGACSGCPSSTFTLKNGIENMLKQMLP 289
>gi|347755644|ref|YP_004863208.1| thioredoxin-like protein [Candidatus Chloracidobacterium
thermophilum B]
gi|347588162|gb|AEP12692.1| Thioredoxin-like protein [Candidatus Chloracidobacterium
thermophilum B]
Length = 197
Score = 89.4 bits (220), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 31 LEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIF 90
+ PG ++ F Q A PL + L I VKSVF FIT+TK D++V+W E+
Sbjct: 41 ITAPGVSLSFSNLQDAAAHPLAEALLAIPHVKSVFMMDRFITITK-DNEVEWD----ELL 95
Query: 91 ATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF 150
+ + PV A + + I ++ + I ++LD RIRP + DGG ++ IS+
Sbjct: 96 RQVAIPIRAAEPVSVSAPAAPN--IKRGENPDLDRINDILDARIRPGLAGDGGGLEVISY 153
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ-FYIPETT 189
+ + ++ QG+C SCPSS+ G+Q++L+ + PE T
Sbjct: 154 KDNTLAVRYQGACGSCPSSISGTLYGIQSILRDEFNPEIT 193
>gi|157876630|ref|XP_001686660.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68129735|emb|CAJ09041.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 311
Score = 89.0 bits (219), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 93/168 (55%), Gaps = 19/168 (11%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRI--EGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
GQ+ + A+ PL + LF + + SVF ++++ + VDW +I +
Sbjct: 91 GQSCEVAHRGLAWVHPLSQGLFEQYPQELMSVFIAPRHVSISVYTN-VDWS----KIEWS 145
Query: 93 IMDFFSSGLPVLTDA--QPSSDTVIHEDD-------DETVQMIKELLDTRIRPTVQEDGG 143
I F L + T+A P+ + + EDD E +Q IKELL ++RP VQ DGG
Sbjct: 146 ISSFLGHYL-IFTNACISPAKEYTLMEDDLELKDTDTEVLQCIKELLREQVRPMVQRDGG 204
Query: 144 DIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
D++ ++F + G+V L M G+C +CPSS TLK+G++ +++ ++PE T
Sbjct: 205 DVKLLNFNEKTGIVSLAMLGACKTCPSSQNTLKDGIERVMKHFVPEVT 252
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD 28
IKELL ++RP VQ DGGD++ ++F +
Sbjct: 187 IKELLREQVRPMVQRDGGDVKLLNFNE 213
>gi|254495078|ref|ZP_05108002.1| NifU-like protein [Polaribacter sp. MED152]
gi|85819428|gb|EAQ40585.1| NifU-like protein [Polaribacter sp. MED152]
Length = 301
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 84/151 (55%), Gaps = 9/151 (5%)
Query: 44 QAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPV 103
+A+ SPL + +F VK VF ++I+VTK D V+W + E+ + I ++ G +
Sbjct: 141 EASKSSPLAQAIFNFPFVKEVFISDNYISVTKYDM-VEWNEVFAEVRSFIREYLVDGKTI 199
Query: 104 LTDAQPSSDTVIHEDDDETVQM------IKELLDTRIRPTVQEDGGDIQFISF--QGGVV 155
+ D + E V++ I ++LD I+P V DGG+I F S+ Q VV
Sbjct: 200 IKDLPTVETSKTPEVVAPVVELEGIPAQISDILDEYIKPAVAGDGGNIAFRSYDEQNKVV 259
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
+ +QG+C+ CPSS TLKNG++++L+ +P
Sbjct: 260 SVILQGACSGCPSSTATLKNGIESLLKEMLP 290
Score = 37.0 bits (84), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G + +F A SPL + LF + VK VF +FI + ++ D V+W ++ E+ I
Sbjct: 28 GGSYEFSNIDEAKNSPLAQQLFYLPFVKKVFITANFIAI-QRFDIVEWADVQDEVAEQIE 86
Query: 95 DFFSSGLPVLTDAQPSS 111
+ S G V+ + SS
Sbjct: 87 AYISDGNIVVNEETTSS 103
>gi|50292835|ref|XP_448850.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528163|emb|CAG61820.1| unnamed protein product [Candida glabrata]
Length = 263
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 85/162 (52%), Gaps = 24/162 (14%)
Query: 52 GKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSS 111
K+ + GV+S+ G DF+TV K D V W ++ ++ + +SG V++D +
Sbjct: 72 SKIFAQCPGVESLMIGDDFLTVNK-DSQVPWAQIQSDVIDLLTQQLASGKNVISDEFHA- 129
Query: 112 DTVIHEDDDETVQMIKELLD-----------------TRIRPTVQEDGGDIQFISF--QG 152
I ED++ Q+ + D TRIRP + EDGGDI F + +
Sbjct: 130 ---IKEDNEAGYQINEMKFDLTEEDEEIKELIEELIETRIRPAILEDGGDIDFRGWDPES 186
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNM 194
G V LK+QG+CTSC SS VTLK G+++ML+ Y+ E + M
Sbjct: 187 GTVYLKLQGACTSCSSSEVTLKYGIESMLKHYVDEVKEVIQM 228
>gi|146103241|ref|XP_001469515.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134073885|emb|CAM72624.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 299
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 93/168 (55%), Gaps = 19/168 (11%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRI--EGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
GQ+ + A+ PL + LF + + SVF ++++ + VDW +I +
Sbjct: 79 GQSCEVAHRGLAWVHPLSQGLFEQYPQELMSVFIAPRHVSISVYTN-VDWS----KIEWS 133
Query: 93 IMDFFSSGLPVLTDA--QPSSDTVIHEDD-------DETVQMIKELLDTRIRPTVQEDGG 143
I F L + T+A P+ + + EDD E +Q IKELL ++RP VQ DGG
Sbjct: 134 ISSFLGHYL-IFTNACISPAKEYTLIEDDLELKDSDSEVLQCIKELLREQVRPMVQRDGG 192
Query: 144 DIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
D++ ++F + G+V L M G+C +CPSS TLK+G++ +++ ++PE T
Sbjct: 193 DVKLLNFNEKTGIVSLAMLGACKTCPSSQNTLKDGIERVMKHFLPEVT 240
Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD 28
IKELL ++RP VQ DGGD++ ++F +
Sbjct: 175 IKELLREQVRPMVQRDGGDVKLLNFNE 201
>gi|398024100|ref|XP_003865211.1| hypothetical protein, conserved [Leishmania donovani]
gi|322503448|emb|CBZ38533.1| hypothetical protein, conserved [Leishmania donovani]
Length = 299
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 93/168 (55%), Gaps = 19/168 (11%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRI--EGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
GQ+ + A+ PL + LF + + SVF ++++ + VDW +I +
Sbjct: 79 GQSCEVAHRGLAWVHPLSQGLFEQYPQELMSVFIAPRHVSISVYTN-VDWS----KIEWS 133
Query: 93 IMDFFSSGLPVLTDA--QPSSDTVIHEDD-------DETVQMIKELLDTRIRPTVQEDGG 143
I F L + T+A P+ + + EDD E +Q IKELL ++RP VQ DGG
Sbjct: 134 ISSFLGHYL-IFTNACISPAKEYTLIEDDLELKDTDSEVLQCIKELLREQVRPMVQRDGG 192
Query: 144 DIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
D++ ++F + G+V L M G+C +CPSS TLK+G++ +++ ++PE T
Sbjct: 193 DVKLLNFNEKTGIVSLAMLGACKTCPSSQNTLKDGIERVMKHFLPEVT 240
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD 28
IKELL ++RP VQ DGGD++ ++F +
Sbjct: 175 IKELLREQVRPMVQRDGGDVKLLNFNE 201
>gi|154345572|ref|XP_001568723.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134066065|emb|CAM43852.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 260
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 91/163 (55%), Gaps = 9/163 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFR--IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
GQ+ + A+ PL + LF + V VF ++++ + VDW ++ I +
Sbjct: 40 GQSCEVAHRGLAWVHPLSQGLFEQYPQEVMCVFIAPRHVSISVYTN-VDWSKIEWSISSF 98
Query: 93 IMDFFSSGLPVLTDAQPSS----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
+ + ++ A+ + D + ++D E +Q IKELL ++RP VQ DGGD++ +
Sbjct: 99 LGHYLIFNNACVSPAKEYTLIEDDLELKDNDSEVLQCIKELLREQVRPMVQRDGGDVKLL 158
Query: 149 SF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+F + GVV L M G+C +CPSS TLK+G++ +++ ++PE T
Sbjct: 159 NFNEKTGVVSLAMLGACRTCPSSQNTLKDGIERVMKHFLPEVT 201
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD 28
IKELL ++RP VQ DGGD++ ++F +
Sbjct: 136 IKELLREQVRPMVQRDGGDVKLLNFNE 162
>gi|82701834|ref|YP_411400.1| nitrogen-fixing NifU-like [Nitrosospira multiformis ATCC 25196]
gi|82409899|gb|ABB74008.1| Nitrogen-fixing NifU-like protein [Nitrosospira multiformis ATCC
25196]
Length = 186
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 6/163 (3%)
Query: 30 VLEEP---GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
+L+EP G T + + A PL + LF I+ V +VF+ +ITVT QD DW+ L
Sbjct: 19 ILKEPLTWGVTRSYDNAEQAKGDPLAEALFDIDHVTNVFYVDRWITVT-QDGAADWQDLA 77
Query: 87 PEIFATIMDFFSSGLPVLTDAQPSSDTV--IHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
E+ I ++ + + + +D + + +I E+LD IRP +Q DGGD
Sbjct: 78 REVADPIRAAPAADAQTAATIAAAGAEIANLSPEDQQRLNLINEMLDEEIRPYLQSDGGD 137
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ + +G + + QG+C +CPSS+ G+QNML+ P+
Sbjct: 138 LHVLGLEGNRLSVHYQGACGTCPSSITGTLRGIQNMLRSIEPD 180
>gi|374596695|ref|ZP_09669699.1| nitrogen-fixing NifU domain-containing protein [Gillisia limnaea
DSM 15749]
gi|373871334|gb|EHQ03332.1| nitrogen-fixing NifU domain-containing protein [Gillisia limnaea
DSM 15749]
Length = 302
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 81/153 (52%), Gaps = 10/153 (6%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F + +PL K LF + VK VF ++I+V K D +W + EI I ++
Sbjct: 136 EFKNIDSTANAPLAKALFHLPFVKEVFMDENYISVNKYDM-AEWNDITIEIREFIRNYLQ 194
Query: 99 SGLPVL------TDAQPSSDTVIHEDD-DETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
G VL T + S T + D DE + ++LD I+P V DGG+I F S+
Sbjct: 195 EGKEVLLKESVETATKTSQKTASNSKDLDEVSLQVIDILDEYIKPAVASDGGNITFDSYN 254
Query: 151 -QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
+ VK+ +QG+C+ CPSS TLKNG++ M++
Sbjct: 255 PETKTVKVILQGACSGCPSSTATLKNGIETMMR 287
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
++ +F + A SPL + LF + VK+VF +FI + K + ++W+ ++ E+ + D
Sbjct: 29 ESFEFGNIEEASKSPLAQQLFHLPFVKTVFIAQNFIAIEKF-NIIEWEDVQEEVANQLKD 87
Query: 96 FFSSGLPVLT-DAQPSSDTV 114
F + G +L +++PS V
Sbjct: 88 FLNEGGVILNIESEPSKKVV 107
>gi|146299436|ref|YP_001194027.1| NifU domain-containing protein [Flavobacterium johnsoniae UW101]
gi|146153854|gb|ABQ04708.1| nitrogen-fixing NifU domain protein [Flavobacterium johnsoniae
UW101]
Length = 299
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 84/144 (58%), Gaps = 10/144 (6%)
Query: 48 CSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
SPL + LF+ VK VF ++I+VTK + + DW+ + E+ I F +G VL ++
Sbjct: 142 SSPLAQELFKFPYVKEVFIDENYISVTKYEIN-DWQEITLELRTFIKQFIENGGTVLDES 200
Query: 108 --QPSSDTVIHEDD-----DETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKLK 158
Q ++ + +D+ D T Q I +L+ ++P V DGG+I F S+ VK+
Sbjct: 201 LIQTATKNDVTKDEAFDKLDVTSQQIINILEEYVKPAVAADGGNIAFDSYNEDDKTVKVI 260
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQ 182
+QG+C+ CPSS TLK+G++NML+
Sbjct: 261 LQGACSGCPSSTFTLKSGIENMLK 284
>gi|429750067|ref|ZP_19283132.1| NifU-like protein [Capnocytophaga sp. oral taxon 332 str. F0381]
gi|429165994|gb|EKY08010.1| NifU-like protein [Capnocytophaga sp. oral taxon 332 str. F0381]
Length = 299
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 93/172 (54%), Gaps = 21/172 (12%)
Query: 38 IDFPTGQAAYCSPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
I++ + + A +PL KLLF V+ VFF +++I+VTK + DW+ + ++ I +
Sbjct: 133 IEYKSAEEAEKAPLAKLLFDNYSFVEEVFFDNNYISVTK-SESADWEEVTGKLREFIRQY 191
Query: 97 FSSGLPVLTDAQPSSDTVIHED-----------DDETVQMIKELLDTRIRPTVQEDGGDI 145
S G ++ S + H++ D Q I +LD +RP V DGG+I
Sbjct: 192 LSEGRTLID----SEEVRRHQEAAQAKLLSMVTTDSVSQQIVAILDEYVRPAVASDGGNI 247
Query: 146 QFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNME 195
QFIS+ + V + +QG+C+ CPSSV TLK G++ +L+ + P +N+E
Sbjct: 248 QFISYCAETHHVAVLLQGACSGCPSSVQTLKKGIEVILKDKL--GNPSINVE 297
Score = 40.8 bits (94), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 57/107 (53%), Gaps = 4/107 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ +F A +PL K LF + VK+V+ +FI + K+ V+WK ++ E+ ++ +
Sbjct: 29 SYEFKNVDEAKNAPLAKELFYLPFVKTVYISSNFIAL-KRFPIVEWKDVQEEVAQQVLLY 87
Query: 97 FSSGLPVL--TDAQPSSDTV-IHEDDDETVQMIKELLDTRIRPTVQE 140
SG +L +P+++ V I+ + ++K + + R+ PT+ E
Sbjct: 88 LQSGREILLGEAGKPANEGVTIYTETTPNPAVMKFVANKRLVPTIIE 134
>gi|325982994|ref|YP_004295396.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. AL212]
gi|325532513|gb|ADZ27234.1| Scaffold protein Nfu/NifU [Nitrosomonas sp. AL212]
Length = 186
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 86/163 (52%), Gaps = 6/163 (3%)
Query: 30 VLEEP---GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
+L+EP G F +AA PL LF I+ V +VF+ +ITVT QD + +W+ L
Sbjct: 19 ILKEPLTWGVARSFDNAEAARDDPLASALFDIDHVTNVFYIDHWITVT-QDGEANWQDLA 77
Query: 87 PEIFATIMDFFSSGLPVLTDAQPSSDTV--IHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
+I I ++ +S + ++ +D ++ I LLD +RP +Q DGGD
Sbjct: 78 RDIADPIRAAPAASAQSAETVATASQALANLNPEDQLRLEKINILLDEEVRPYLQSDGGD 137
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ + +G ++ + QG+C +CPSS+ G++NML+ P+
Sbjct: 138 LHILGLEGNILHIHYQGACGTCPSSISGTLRGIENMLRTLEPD 180
>gi|360043730|emb|CCD81276.1| iron-sulfur cluster scaffold protein nfu-related, partial
[Schistosoma mansoni]
Length = 154
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFP+ + SPL + LFRIEGV+ VFFG DFIT+TK +DD +W ++KP+++ATIMDF
Sbjct: 71 TRDFPSCTQSTSSPLARQLFRIEGVERVFFGPDFITITK-NDDFEWAVIKPDVYATIMDF 129
Query: 97 FSSGLPVLTDAQ 108
+SSG PV+++ +
Sbjct: 130 YSSGQPVVSEEK 141
>gi|256089666|ref|XP_002580899.1| iron-sulfur cluster scaffold protein nfu-related [Schistosoma
mansoni]
Length = 153
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 57/72 (79%), Gaps = 1/72 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DFP+ + SPL + LFRIEGV+ VFFG DFIT+TK +DD +W ++KP+++ATIMDF
Sbjct: 70 TRDFPSCTQSTSSPLARQLFRIEGVERVFFGPDFITITK-NDDFEWAVIKPDVYATIMDF 128
Query: 97 FSSGLPVLTDAQ 108
+SSG PV+++ +
Sbjct: 129 YSSGQPVVSEEK 140
>gi|71665794|ref|XP_819863.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70885183|gb|EAN98012.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 426
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 82 WKLLKPEIFATIMDFFSSGLP-VLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
W LK + A + D SG P V DA P DT+ E D E V ++KEL+ T IRP +Q
Sbjct: 274 WSELKLHVSALLTDHLFSGRPHVDPDAPHPHPDTLPQEGDSEVVLILKELISTTIRPQLQ 333
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI+F+S +GGV+ ++M G+C C SS TL + ++ + ++PE
Sbjct: 334 LDGGDIRFVSLEGGVMYVEMLGACRRCKSSKTTLSDLIERTTRHWVPE 381
Score = 41.6 bits (96), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
++KEL+ T IRP +Q DGGDI+F+S + GV+
Sbjct: 319 ILKELISTTIRPQLQLDGGDIRFVSLEGGVM 349
>gi|407849302|gb|EKG04085.1| hypothetical protein TCSYLVIO_004855 [Trypanosoma cruzi]
Length = 458
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 82 WKLLKPEIFATIMDFFSSGLP-VLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
W LK + A + D SG P V DA P DT+ E D E V ++KEL+ T IRP +Q
Sbjct: 306 WSELKLHVSALLTDHLFSGRPHVDPDAPHPHPDTLPQEGDSEVVLILKELISTTIRPQLQ 365
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI+F+S +GGV+ ++M G+C C SS TL + ++ + ++PE
Sbjct: 366 LDGGDIRFVSLEGGVMYVEMLGACRRCKSSKTTLSDLIERTTRHWVPE 413
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
++KEL+ T IRP +Q DGGDI+F+S + GV+
Sbjct: 351 ILKELISTTIRPQLQLDGGDIRFVSLEGGVM 381
>gi|383449702|ref|YP_005356423.1| hypothetical protein KQS_01870 [Flavobacterium indicum GPTSA100-9]
gi|380501324|emb|CCG52366.1| Protein of unknown function [Flavobacterium indicum GPTSA100-9]
Length = 298
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 10/144 (6%)
Query: 48 CSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL--- 104
SPL K LF VK VF +++++TK D W+ + E+ + + V+
Sbjct: 141 ASPLAKDLFSFPFVKEVFIDENYVSITKYDI-ASWEEITFELRNFLKQYLEQTDIVVDET 199
Query: 105 ----TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLK 158
TD E+ D T Q I +L+ ++P VQ DGG+I F S+ Q +VK+
Sbjct: 200 LIEKTDNYKIQQEEYFENLDVTSQQIINILEEYVKPAVQSDGGNITFNSYDEQANIVKVT 259
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQ 182
+QG+C+ CPSS TLKNG++NML+
Sbjct: 260 LQGACSGCPSSTFTLKNGIENMLR 283
>gi|71416241|ref|XP_810158.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70874651|gb|EAN88307.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 452
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 82 WKLLKPEIFATIMDFFSSGLP-VLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
W LK + A + D SG P V DA P DT+ E D E V ++KEL+ T IRP +Q
Sbjct: 301 WSELKLHVSALLTDHLFSGRPHVDPDAPHPHPDTLPQEGDSEVVLILKELISTTIRPQLQ 360
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI+F+S +GGV+ ++M G+C C SS TL + ++ + ++PE
Sbjct: 361 LDGGDIRFVSLEGGVMYVEMLGACRRCKSSKTTLSDLIERTTRHWVPE 408
Score = 41.6 bits (96), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
++KEL+ T IRP +Q DGGDI+F+S + GV+
Sbjct: 346 ILKELISTTIRPQLQLDGGDIRFVSLEGGVM 376
>gi|260060626|ref|YP_003193706.1| nifU related protein [Robiginitalea biformata HTCC2501]
gi|88784756|gb|EAR15925.1| nifU related protein [Robiginitalea biformata HTCC2501]
Length = 300
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT 105
A SPL + LF VK VF H++I+VTK + +W+ + E+ I ++ ++G VL
Sbjct: 141 ARHSPLAQKLFGFPFVKEVFMDHNYISVTKYEV-AEWEDVSMELREFIREYLAAGGEVLE 199
Query: 106 DAQPSSDTVIH-------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG--GVVK 156
+ + I E D Q I +L+ ++P V DGG+I F S++ V
Sbjct: 200 PGASAEKSQIAGVPEGNLEQMDPISQEIAGILEEYVKPAVASDGGNIVFQSYEAESKTVH 259
Query: 157 LKMQGSCTSCPSSVVTLKNGVQNMLQ 182
+ +QG+C+ CPSS TLKNG+Q MLQ
Sbjct: 260 VILQGACSGCPSSTFTLKNGIQTMLQ 285
>gi|401419888|ref|XP_003874433.1| conserved hypothetical protein, partial [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490669|emb|CBZ25931.1| conserved hypothetical protein, partial [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 301
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 91/163 (55%), Gaps = 9/163 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFR--IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
GQ+ + A+ PL + LF + V SVF ++++ + V+W ++ I +
Sbjct: 81 GQSCEVAHRGLAWVHPLSQGLFEQYSQEVMSVFIAPRHVSISVYTN-VEWSKIEWSISSF 139
Query: 93 IMDFFSSGLPVLTDAQPSS----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
+ + ++ A+ + D + + D E +Q IKELL ++RP VQ DGGD++ +
Sbjct: 140 LGHYLIFNNTCISPAKEYTLIEDDLELKDTDSEVLQCIKELLREQVRPMVQRDGGDVKLL 199
Query: 149 SF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+F + GVV L M G+C +CPSS TLK+G++ +++ ++PE T
Sbjct: 200 NFNEKTGVVSLAMLGACKTCPSSQNTLKDGIERVMKHFLPEVT 242
Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD 28
IKELL ++RP VQ DGGD++ ++F +
Sbjct: 177 IKELLREQVRPMVQRDGGDVKLLNFNE 203
>gi|420149009|ref|ZP_14656192.1| NifU-like protein [Capnocytophaga sp. oral taxon 335 str. F0486]
gi|394754318|gb|EJF37733.1| NifU-like protein [Capnocytophaga sp. oral taxon 335 str. F0486]
Length = 299
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 86/144 (59%), Gaps = 11/144 (7%)
Query: 49 SPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
+P+ K LF + ++ VFF +++I+VTK+D+ +W ++ P I I ++ S G +++ +
Sbjct: 142 APMAKALFTQFPFIEEVFFDNNYISVTKKDNK-EWAMVTPNIREFIKNYLSEGHTLISSS 200
Query: 108 Q-PSSDTVIHED------DDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLK 158
+ I E DE + I ++D ++P V DGG+IQFIS+ + V++
Sbjct: 201 EIKRHQQAIQERLLSMVTTDEISKQIVAIIDEFVKPAVASDGGNIQFISYNPETHYVEVI 260
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQ 182
+QG+C+ CPSS +TLK G++ +L+
Sbjct: 261 LQGACSGCPSSTLTLKKGIEVILK 284
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL- 104
A SPL K LF + VK+V+ +FI + K+ ++WK ++ E+ ++ + SG ++
Sbjct: 38 AKNSPLAKELFYLPFVKTVYISSNFIAL-KRFPIIEWKDVQEEVAQQVLFYLQSGREIVS 96
Query: 105 TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
T+ + I+ + ++K + + R+ PT+ E
Sbjct: 97 TEGEQKKVISIYTETTPNPSVMKFVANKRLVPTIIE 132
>gi|294877894|ref|XP_002768180.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239870377|gb|EER00898.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 251
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 98/169 (57%), Gaps = 5/169 (2%)
Query: 30 VLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEI 89
+L + + F + + + SPL LF+IEGV+ V H + V+K +DW +KP++
Sbjct: 70 ILPSGAKGMTFDSKEGSSQSPLALSLFKIEGVERVVLTHHNVAVSKV-SSIDWCFVKPKV 128
Query: 90 FATIMDFFS-SGLPVLTDAQPSSDTVIHE-DDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
+ + +FF+ GL + + +T + E + + ++ I E+LD RIRP +Q+DGGD+
Sbjct: 129 ESVLSNFFAVPGLQSVYRSALQFETEVEEAEKAKLMERIAEVLDDRIRPVLQDDGGDVDV 188
Query: 148 ISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNM 194
F + GV+ ++++G+C CP S VTL+ ++NML +PE +N+
Sbjct: 189 ADFDEETGVLSVRLKGACAGCPMSSVTLRFRIENMLVQSVPEVKKVINI 237
>gi|423328849|ref|ZP_17306656.1| hypothetical protein HMPREF9711_02230 [Myroides odoratimimus CCUG
3837]
gi|404604411|gb|EKB04045.1| hypothetical protein HMPREF9711_02230 [Myroides odoratimimus CCUG
3837]
Length = 299
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 18/173 (10%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
I+F++ + +L + G ++F A SPL K LF+ VK VF ++++++K D
Sbjct: 119 IKFVA--NKLLTKKG--VEFKNIDEASASPLAKKLFKQSFVKEVFIDENYVSISKYDS-F 173
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDA--------QPSSDTVIHEDD-DETVQMIKELLD 131
+W L A I +F +G + ++ + ++D H D DE Q I +L+
Sbjct: 174 EWDQLVQVTRAFIKEFLENGNLAVDESLIHDVKAIEAAADE--HFDSLDEKSQRIINILE 231
Query: 132 TRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
++P VQ DGG+I F + + +V + +QG+C+ CPSS TLKNG++ ML+
Sbjct: 232 ENVKPAVQADGGNIAFQKYDQESNIVHVLLQGACSGCPSSTFTLKNGIEGMLR 284
>gi|373108741|ref|ZP_09523022.1| hypothetical protein HMPREF9712_00615 [Myroides odoratimimus CCUG
10230]
gi|423129589|ref|ZP_17117264.1| hypothetical protein HMPREF9714_00664 [Myroides odoratimimus CCUG
12901]
gi|423133252|ref|ZP_17120899.1| hypothetical protein HMPREF9715_00674 [Myroides odoratimimus CIP
101113]
gi|371645986|gb|EHO11503.1| hypothetical protein HMPREF9712_00615 [Myroides odoratimimus CCUG
10230]
gi|371648639|gb|EHO14127.1| hypothetical protein HMPREF9714_00664 [Myroides odoratimimus CCUG
12901]
gi|371649308|gb|EHO14789.1| hypothetical protein HMPREF9715_00674 [Myroides odoratimimus CIP
101113]
Length = 299
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 18/173 (10%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
I+F++ + +L + G ++F A SPL K LF+ VK VF ++++++K D
Sbjct: 119 IKFVA--NKLLTKKG--VEFKNIDEASASPLAKELFKQSFVKEVFIDENYVSISKYDS-F 173
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDA--------QPSSDTVIHEDD-DETVQMIKELLD 131
+W L A I +F +G + ++ + ++D H D DE Q I +L+
Sbjct: 174 EWDQLVQVTRAFIKEFLENGNLAVDESLIHDVKAIEAAADE--HFDSLDEKSQRIINILE 231
Query: 132 TRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
++P VQ DGG+I F + + +V + +QG+C+ CPSS TLKNG++ ML+
Sbjct: 232 ENVKPAVQADGGNIAFQKYDQESNIVHVLLQGACSGCPSSTFTLKNGIEGMLR 284
>gi|126663121|ref|ZP_01734119.1| thioredoxin-related protein [Flavobacteria bacterium BAL38]
gi|126624779|gb|EAZ95469.1| thioredoxin-related protein [Flavobacteria bacterium BAL38]
Length = 299
Score = 86.7 bits (213), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 12/145 (8%)
Query: 48 CSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
SPL K LF+ VK +F ++I+VTK +W + E+ I ++ +G V+ D
Sbjct: 142 ASPLAKELFKFPFVKEIFIDENYISVTKFAV-TEWDEITLELRTFIKEYIENGNTVI-DE 199
Query: 108 QPSSDTVIHEDDDE--------TVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKL 157
T IH+ E T Q I +++ ++P VQ DGG+I F SF VK+
Sbjct: 200 TAIVKTEIHQKQQEAYFDTLDVTSQQIINIIEEYVKPAVQSDGGNIMFESFDPIEKRVKV 259
Query: 158 KMQGSCTSCPSSVVTLKNGVQNMLQ 182
+QG+C+ CPSS TLKNG++NML+
Sbjct: 260 ILQGACSGCPSSTFTLKNGIENMLK 284
>gi|228472622|ref|ZP_04057382.1| nitrogen-fixing NifU domain protein [Capnocytophaga gingivalis ATCC
33624]
gi|228276035|gb|EEK14791.1| nitrogen-fixing NifU domain protein [Capnocytophaga gingivalis ATCC
33624]
Length = 299
Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 4/148 (2%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F T + A SPL + LF + VKSVFF +++++T+ W+ + E + +
Sbjct: 136 EFKTIEEAENSPLAQALFGFDFVKSVFFDANYVSITRLPRSTPWEEVMMETREFLRQYLM 195
Query: 99 SGLPVLTDAQPSSDTV--IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
G V+ A D + D + I LLD IRP V DGG+I+F+S+ +
Sbjct: 196 EGKTVVKVAVSEEDRPKGLPRLGDIYSKKIVALLDQYIRPAVSSDGGNIEFVSYDKETHK 255
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
VK+ +QG+C CPSS +TLK G++ +L+
Sbjct: 256 VKVVLQGACNGCPSSRITLKQGIEGLLR 283
>gi|347535419|ref|YP_004842844.1| hypothetical protein FBFL15_0488 [Flavobacterium branchiophilum
FL-15]
gi|345528577|emb|CCB68607.1| Protein of unknown function [Flavobacterium branchiophilum FL-15]
Length = 297
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 82/156 (52%), Gaps = 10/156 (6%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+++ SPL + LF VK VF ++I+VTK + DW + E+ I +
Sbjct: 130 NAVEYKNIDETLSSPLARALFEFSYVKEVFIDENYISVTKFEM-ADWNTVSLELRTFIKN 188
Query: 96 FFSSGLPVLTDA----QPSSDTVIHEDDDE---TVQMIKELLDTRIRPTVQEDGGDIQFI 148
F +G V+ ++ P + +D D+ T Q I +L+ ++P V DGG+I F
Sbjct: 189 FIENGGIVVDESLLINNPKQEKQQLQDFDKLDVTSQQIINILEEYVKPAVAADGGNILFD 248
Query: 149 SFQGG--VVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
S+ VK+ +QG+C CPSS TLKNG++NML+
Sbjct: 249 SYNEAEKRVKVVLQGACNGCPSSTFTLKNGIENMLK 284
>gi|408369251|ref|ZP_11167032.1| NifU-like protein [Galbibacter sp. ck-I2-15]
gi|407744997|gb|EKF56563.1| NifU-like protein [Galbibacter sp. ck-I2-15]
Length = 301
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 14/175 (8%)
Query: 17 DGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQ 76
+ ++F++ + VL Q +F + A SPL LF VK VF ++I++ K
Sbjct: 117 NPAALKFVANKKLVL----QASEFKNIEEAKHSPLATGLFHFPFVKEVFITDNYISIIKY 172
Query: 77 DDDVDWKLLKPEIFATIMDFFSSGLPVLT-----DAQPSSDTVIHEDD--DETVQMIKEL 129
D +W+ + E+ I + G ++T ++ TV ++ D+T Q I ++
Sbjct: 173 DI-AEWEDVAVELREYIRSYIEEGKEIVTQHTSAKTAAAAQTVAEQNVTLDDTSQEIVDI 231
Query: 130 LDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
L+ ++P V DGG+I F S+ + V + +QG+C+ CPSS TLKNG++NML+
Sbjct: 232 LEEYVKPAVASDGGNILFQSYDQETKTVNVILQGACSGCPSSTFTLKNGIENMLK 286
Score = 45.4 bits (106), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 11 RPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDF 70
RPT+ I F+ V Q +F A SPL K LF + K+V+ +F
Sbjct: 13 RPTI---------IKFEADVFLTRKQNYEFKNVDEAKNSPLAKQLFYLPFTKTVYISGNF 63
Query: 71 ITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTV 114
+ + + D V+W ++ E+ I ++ +SG P++ + Q + V
Sbjct: 64 VAIERYDI-VEWPEVQNEVAEQIENYLNSGEPIIIEDQSTPSKV 106
>gi|392390342|ref|YP_006426945.1| thioredoxin-like protein [Ornithobacterium rhinotracheale DSM
15997]
gi|390521420|gb|AFL97151.1| thioredoxin-like protein [Ornithobacterium rhinotracheale DSM
15997]
Length = 292
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 85/159 (53%), Gaps = 9/159 (5%)
Query: 36 QTIDFPTGQAAYCSPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
Q ++ + + A P+ L+ + VK VF +F++VT D VDW++ EI ++
Sbjct: 124 QIVEVKSREEAAQVPVAVELYENFDFVKEVFLQENFLSVTA-DHKVDWQIKALEIREFLL 182
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETV-----QMIKELLDTRIRPTVQEDGGDIQFIS 149
++ SG ++ + E ++ V + I+ +LD I+P V DGG+I IS
Sbjct: 183 NYLQSGKTIVKSDYTAPKNEWEEHLEQKVYSGTEKEIQRVLDQYIQPAVANDGGNIALIS 242
Query: 150 F--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
F K+ +QG+C+ CPSS +TLKNG++ ML+ +P
Sbjct: 243 FDESTKTAKMLLQGACSGCPSSTITLKNGIEAMLKEMLP 281
>gi|315223924|ref|ZP_07865769.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea F0287]
gi|420158773|ref|ZP_14665587.1| NifU-like protein [Capnocytophaga ochracea str. Holt 25]
gi|314946096|gb|EFS98100.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea F0287]
gi|394763260|gb|EJF45380.1| NifU-like protein [Capnocytophaga ochracea str. Holt 25]
Length = 299
Score = 85.9 bits (211), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 86/148 (58%), Gaps = 19/148 (12%)
Query: 49 SPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
+P+ K LF + ++ VFF ++I+VTK+D+ +W ++ P I I ++ S G +++
Sbjct: 142 APMAKALFTQFPFIEEVFFDDNYISVTKKDNK-EWAMVTPNIREFIKNYLSEGHTLIS-- 198
Query: 108 QPSSDTVIHED-----------DDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SS+ H+ DE + I ++D ++P V DGG+IQFIS+ +
Sbjct: 199 --SSEIKRHQQATQERLLSMVTTDEVSKQIVAIIDEFVKPAVASDGGNIQFISYNPETHY 256
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
V++ +QG+C+ CPSS +TLK G++ +L+
Sbjct: 257 VEVILQGACSGCPSSTLTLKKGIEVILK 284
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL- 104
A SPL K LF + VK+V+ +FI + K+ ++WK ++ E+ ++ + SG ++
Sbjct: 38 AKNSPLAKELFYLPFVKTVYISSNFIAL-KRFPIIEWKDVQEEVAQQVLLYLQSGREIVS 96
Query: 105 TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
T+ + ++ + ++K + + R+ PT+ E
Sbjct: 97 TEGEQKEIISVYTETTPNPSVMKFVANKRLVPTIIE 132
>gi|365875391|ref|ZP_09414920.1| nitrogen-fixing nifu domain protein [Elizabethkingia anophelis Ag1]
gi|442588212|ref|ZP_21007024.1| Thioredoxin-like protein [Elizabethkingia anophelis R26]
gi|365757039|gb|EHM98949.1| nitrogen-fixing nifu domain protein [Elizabethkingia anophelis Ag1]
gi|442561917|gb|ELR79140.1| Thioredoxin-like protein [Elizabethkingia anophelis R26]
Length = 292
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 8/157 (5%)
Query: 38 IDFPTGQAAYCSPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
++ T + A PL K +F +++ VK VF +F+ +TK D+ V W + + I D+
Sbjct: 127 LEIRTPEEATDVPLAKTIFEKLDYVKEVFISDNFVALTKIDN-VQWHEVMMDARGFIADY 185
Query: 97 FSSGLPVLTDAQPSSDT----VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-- 150
+G P+ + +I+ D + Q I ++L+ + P V+ DGG I I +
Sbjct: 186 LQNGNPISNVPAHQHENPVQKIINRDYTDDEQKISDILNEYVSPAVENDGGKISLIEYDK 245
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ ++ +QG+C+ CPSS TLKNG++ +L+ ++PE
Sbjct: 246 ESKTARMLLQGACSGCPSSTATLKNGIEAILKQFVPE 282
>gi|294941309|ref|XP_002783074.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239895342|gb|EER14870.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 165
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 8/117 (6%)
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHE----DDDETVQMIKELLDTRIRPTVQ 139
+LKP + I FF +P + P S E +D+ V+ I E+L+ RI+P V+
Sbjct: 1 MLKPNVELVISQFFD--IPNVKPVAPDSIEYTQEGQDQHNDDVVKSIHEILEQRIKPFVE 58
Query: 140 EDGGDIQFISFQG--GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNM 194
DGGD++FI+F GV+++++ GSC CP S VTLK G+Q M+ YIPE +N+
Sbjct: 59 RDGGDVEFIAFDSDTGVLQIRLVGSCAGCPKSSVTLKFGIQRMVCHYIPEVKNVINI 115
Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%), Gaps = 2/33 (6%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQD--GVLE 32
I E+L+ RI+P V+ DGGD++FI+F GVL+
Sbjct: 45 IHEILEQRIKPFVERDGGDVEFIAFDSDTGVLQ 77
>gi|399928054|ref|ZP_10785412.1| hypothetical protein MinjM_13627 [Myroides injenensis M09-0166]
Length = 299
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 91/171 (53%), Gaps = 14/171 (8%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
I+F++ + +L + G ++F A SPL + LF+ V+ VF ++++++K
Sbjct: 119 IKFVA--NKILTKKG--VEFKNIDEANSSPLAQELFKKPFVREVFIDENYVSISKYSS-F 173
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDD-------DETVQMIKELLDTR 133
+W + + I ++ GL + ++ + I E + DE Q I +L+
Sbjct: 174 EWNDIVNDTRYFIKEYLEKGLLAVDESLITDTKAIDEKEELHFDSLDEKSQRIINILEEY 233
Query: 134 IRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
++P VQ DGG+I F + + V + +QG+C+ CPSS TLKNG++NML+
Sbjct: 234 VKPAVQADGGNIAFQQYDEESNTVHVLLQGACSGCPSSTFTLKNGIENMLR 284
Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G+ +F SPL K LF + VK+V+ ++FI + K V+W +K + I
Sbjct: 26 GENFEFKNIDETANSPLAKELFYLPFVKTVYISNNFIAIEKF-SIVEWDEVKETVADQIE 84
Query: 95 DFFSSGLPVLTDAQ 108
F + G +L D++
Sbjct: 85 LFLAKGKKILIDSK 98
>gi|408490928|ref|YP_006867297.1| iron-sulfur cluster assembly protein NifU-like protein
[Psychroflexus torquis ATCC 700755]
gi|408468203|gb|AFU68547.1| iron-sulfur cluster assembly protein NifU-like protein
[Psychroflexus torquis ATCC 700755]
Length = 302
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 94/172 (54%), Gaps = 16/172 (9%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F++ + VLE + +F + A SPL + LF VK +F ++I++ K D
Sbjct: 122 MKFVANKKLVLE----SAEFKSIDDAELSPLAQKLFHFPFVKEIFMDDNYISINKYDM-A 176
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDAQ--------PSSDTVIHEDDDETVQMIKELLDT 132
+W+ + E+ I D+ G +L + PS + DD + +++ ++L+
Sbjct: 177 EWEEITNELRGFIKDYLEEGGKILESGKVQSKKTEAPSPEIDTSNLDDISKEIV-QILEE 235
Query: 133 RIRPTVQEDGGDIQFISFQGGV--VKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
++P V DGG+I F S+ V++ +QG+C+ CPSS +TLKNG+++ML+
Sbjct: 236 YVKPAVASDGGNIMFKSYNAESKDVQVILQGACSGCPSSTITLKNGIESMLK 287
>gi|30249416|ref|NP_841486.1| nitrogen-fixing protein NifU [Nitrosomonas europaea ATCC 19718]
gi|30138779|emb|CAD85356.1| Nitrogen-fixing protein NifU [Nitrosomonas europaea ATCC 19718]
Length = 186
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 16/168 (9%)
Query: 30 VLEEP---GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
VL+EP G + + A PL LF I+ V +VF+ +IT+T QD DW+ L
Sbjct: 19 VLKEPLTWGVAKSYDHAEQAVDDPLAAALFDIDHVTNVFYVDRWITIT-QDGGADWQDLA 77
Query: 87 PEIFATIMDFFSSGLPVLTDAQPSSDTV-------IHEDDDETVQMIKELLDTRIRPTVQ 139
E+ I P TD + + E+D + ++ I LLD +RP +Q
Sbjct: 78 REVADPI-----RAAPAATDQSAAVVAAASRTLADLSEEDQQRLERINILLDEEVRPFLQ 132
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGD+ ++ +G ++++ QG+C +CPSS+ G++ +L+ P+
Sbjct: 133 HDGGDLHVLALEGNILRIHYQGACGTCPSSISGTLRGIEQLLRTIEPD 180
>gi|300776224|ref|ZP_07086083.1| nitrogen-fixing NifU [Chryseobacterium gleum ATCC 35910]
gi|300505357|gb|EFK36496.1| nitrogen-fixing NifU [Chryseobacterium gleum ATCC 35910]
Length = 292
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
Query: 38 IDFPTGQAAYCSPLGKLLFR-IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
++ + AA PL + +F+ + VF +F+ VT+ D+ V+W + + A I ++
Sbjct: 127 VEVKSKDAAEEVPLAQAIFKEFDFATEVFISDNFVAVTR-DNSVEWHQVMMTVRALIAEY 185
Query: 97 FSSGLPVLTDAQPSS-----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
+G + + +P + +I+ D E Q I ++L+ + P V+ DGG I + +
Sbjct: 186 LQNGGEI-SKIEPQKHENPVEKIINRDYTEDEQKISDILNEYVAPAVENDGGKISLMEYD 244
Query: 151 -QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ K+ +QG+C+ CPSS TLKNG++N+L+ ++P+
Sbjct: 245 QENKTAKMLLQGACSGCPSSTATLKNGIENILKQFVPD 282
>gi|393779593|ref|ZP_10367831.1| NifU-like protein [Capnocytophaga sp. oral taxon 412 str. F0487]
gi|392609913|gb|EIW92708.1| NifU-like protein [Capnocytophaga sp. oral taxon 412 str. F0487]
Length = 299
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 86/148 (58%), Gaps = 19/148 (12%)
Query: 49 SPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
+P+ K LF + ++ VFF ++I+VTK+D+ +W ++ P I I ++ S G +++
Sbjct: 142 APMAKALFTQFPFIEEVFFDDNYISVTKKDNK-EWAMVTPNIREFIKNYLSEGHMLIS-- 198
Query: 108 QPSSDTVIHED-----------DDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SS+ H+ DE + I ++D ++P V DGG+IQFIS+ +
Sbjct: 199 --SSEIKRHQQATQERLLSMVTTDEVSKQIVAIIDEFVKPAVASDGGNIQFISYNPETHY 256
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
V++ +QG+C+ CPSS +TLK G++ +L+
Sbjct: 257 VEVILQGACSGCPSSTLTLKKGIEVILK 284
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL- 104
A SPL K LF + +K+V+ +FI + K+ ++WK ++ E+ ++ + SG ++
Sbjct: 38 AKNSPLAKELFYLPFIKTVYISSNFIAL-KRFPIIEWKDVQEEVAQQVLFYLQSGREIVS 96
Query: 105 TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
T+ + I+ + ++K + + R+ PT+ E
Sbjct: 97 TEGEQKKVISIYTETTPNPSVMKFVANKRLVPTIIE 132
>gi|381187256|ref|ZP_09894821.1| nifU-like protein [Flavobacterium frigoris PS1]
gi|379650866|gb|EIA09436.1| nifU-like protein [Flavobacterium frigoris PS1]
Length = 299
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 89/156 (57%), Gaps = 10/156 (6%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
I+F SPL K LF+ VK VF ++I+VTK + + +W+ + E+ + I
Sbjct: 130 NAIEFKNIDQTAPSPLAKELFKFSYVKEVFIDENYISVTKYEVN-NWEEITLELRSFIKQ 188
Query: 96 FFSSGLPVLTD----AQPSSDTVIHEDDDE---TVQMIKELLDTRIRPTVQEDGGDIQFI 148
+ +G VL + A+ + + +ED D+ T Q I +L+ ++P V DGG+I F
Sbjct: 189 YIENGGIVLDESVVLAKENKEKNKNEDFDKLDVTSQQIINILEEYVKPAVAADGGNIIFD 248
Query: 149 SFQGG--VVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
S+ VVK+ +QG+C+ CPSS TLK+G++NML+
Sbjct: 249 SYNESDKVVKVVLQGACSGCPSSTFTLKSGIENMLK 284
>gi|429756073|ref|ZP_19288686.1| NifU-like protein [Capnocytophaga sp. oral taxon 324 str. F0483]
gi|429172094|gb|EKY13675.1| NifU-like protein [Capnocytophaga sp. oral taxon 324 str. F0483]
Length = 299
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 86/148 (58%), Gaps = 19/148 (12%)
Query: 49 SPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
+P+ K LF + ++ VFF ++I+VTK+D+ +W ++ P I I ++ S G +++
Sbjct: 142 APMAKALFTQFPFIEEVFFDDNYISVTKKDNK-EWAMVTPNIREFIKNYLSEGHMLIS-- 198
Query: 108 QPSSDTVIHED-----------DDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SS+ H+ DE + I ++D ++P V DGG+IQFIS+ +
Sbjct: 199 --SSEIKRHQQATQERLLSMVTTDEVSKQIVAIIDEFVKPAVASDGGNIQFISYNPETHY 256
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
V++ +QG+C+ CPSS +TLK G++ +L+
Sbjct: 257 VEVILQGACSGCPSSTLTLKKGIEVILK 284
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL- 104
A SPL K LF + VK+V+ +FI + K+ ++WK ++ E+ ++ + SG ++
Sbjct: 38 AKNSPLAKELFYLPFVKTVYISSNFIAL-KRFPIIEWKDVQEEVAQQVLLYLQSGREIVS 96
Query: 105 TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
T+ + ++ + ++K + + R+ PT+ E
Sbjct: 97 TEGEQKKVISVYTETTPNPSVMKFVTNKRLVPTIIE 132
>gi|395803517|ref|ZP_10482763.1| NifU domain-containing protein [Flavobacterium sp. F52]
gi|395434329|gb|EJG00277.1| NifU domain-containing protein [Flavobacterium sp. F52]
Length = 299
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 82/144 (56%), Gaps = 10/144 (6%)
Query: 48 CSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
SPL + LF+ VK +F ++I+VTK + + +W + E+ I F +G VL ++
Sbjct: 142 SSPLAQELFKFPYVKEIFIDENYISVTKYEIN-NWDEITLELRTFIKQFIENGGTVLDES 200
Query: 108 --QPSSDTVIHEDD-----DETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKLK 158
+ + T +D+ D T Q I +L+ ++P V DGG+I F S+ VK+
Sbjct: 201 LIETKAKTEAKKDEAFDKLDVTSQQIINILEEYVKPAVAADGGNIAFESYNEDDKTVKVL 260
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQ 182
+QG+C+ CPSS TLK+G++NML+
Sbjct: 261 LQGACSGCPSSTFTLKSGIENMLK 284
>gi|432957523|ref|XP_004085837.1| PREDICTED: NFU1 iron-sulfur cluster scaffold homolog,
mitochondrial-like, partial [Oryzias latipes]
Length = 179
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 63/96 (65%), Gaps = 1/96 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T+DFP+ +A S L + LF IEGVK VFFG DFIT+TK D+DV+W +K I F
Sbjct: 85 TLDFPSPSSAGSSSLARNLFEIEGVKGVFFGPDFITITKTDEDVEWTHIKRHAMEVIAKF 144
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDT 132
F SG V T+A +++ EDDD+ V MIKELLDT
Sbjct: 145 FESGDQVTTEAVHGENSLA-EDDDDIVSMIKELLDT 179
>gi|332877772|ref|ZP_08445513.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
gi|332684352|gb|EGJ57208.1| NifU-like protein [Capnocytophaga sp. oral taxon 329 str. F0087]
Length = 298
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 91/168 (54%), Gaps = 13/168 (7%)
Query: 38 IDFPTGQAAYCSPLGKLLFR-IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
I++ + A +PL + LF+ + VFF +D+I+VTK D DW+ P + A I D+
Sbjct: 132 IEYKSATEAAEAPLAQALFQAFPFITEVFFDNDYISVTK-TDTADWEEESPRLRAFIKDY 190
Query: 97 FSSGLPVLTDAQPSS-DTVIHED------DDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
++ V+ ++ T + D Q I +++ ++P V DGG+IQFIS
Sbjct: 191 LAAEKTVINISEVKKWQTAVQAHLLSKVTTDPISQQIVAIIEEHVKPAVASDGGNIQFIS 250
Query: 150 FQGGV--VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNME 195
+Q V++ +QG+C+ CPSS TLK G++ +L+ + P +N+E
Sbjct: 251 YQPDTHHVEVLLQGACSGCPSSTQTLKKGIEAILKNKL--GNPDINVE 296
Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT 105
A +PL K LF + +K+V+ +FI + K+ ++WK ++ E+ I + SG P++
Sbjct: 38 AKNAPLAKELFYLPFIKTVYISSNFIAL-KRFPIIEWKDVQEEVAQQIAVYLQSGRPLVN 96
Query: 106 D--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
+ + + ++ + ++K + + R+ PT+ E
Sbjct: 97 NDSGRTPVEVSLYTETTPNPAVMKFVANKRLVPTIIE 133
>gi|163753913|ref|ZP_02161036.1| thioredoxin-related protein [Kordia algicida OT-1]
gi|161326127|gb|EDP97453.1| thioredoxin-related protein [Kordia algicida OT-1]
Length = 301
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 12/144 (8%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
+PL + LF VK +F ++I++TK D V+W + EI I ++ G V++
Sbjct: 145 APLAQSLFHFPFVKEIFLDKNYISITKYDM-VEWNDITMEIREFIRNYIQEGREVISKDI 203
Query: 109 PS--------SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLK 158
P SD E DD + +++ +L+ I+P V DGG+I F S+ +VK+
Sbjct: 204 PVEQKEKIQISDESFEELDDISKEIVN-ILEEYIKPAVASDGGNIMFDSYDPNSKIVKVV 262
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQ 182
+QG+C+ CPSS +TLK+G++N L+
Sbjct: 263 LQGACSGCPSSTMTLKSGIENTLK 286
>gi|319953626|ref|YP_004164893.1| nitrogen-fixing nifu domain-containing protein [Cellulophaga
algicola DSM 14237]
gi|319422286|gb|ADV49395.1| nitrogen-fixing NifU domain-containing protein [Cellulophaga
algicola DSM 14237]
Length = 300
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 10/153 (6%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F A S L K LF VK VFF ++ +VTK + DW + +I I +F +
Sbjct: 134 EFKNIDEAKDSELAKKLFHFPFVKEVFFDENYASVTKYEV-ADWNEVTFDIRELIRNFIA 192
Query: 99 SGLPVLT-------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
GL V++ A+ + + D+T + I ++L+ ++P V DGG+I F S+
Sbjct: 193 DGLEVVSAESVVKKKAEAPKTQLQDANLDDTSKKIIDILEEYVKPAVASDGGNIMFKSYD 252
Query: 151 -QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
+ V + +QG+C+ CPSS TLKNG+++ML+
Sbjct: 253 KETKTVNVILQGACSGCPSSTYTLKNGIESMLK 285
Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
A SPL + LF + VK+V+ +FI + + V+W +K E+ ++++ +SG PV+
Sbjct: 39 AKNSPLAQQLFYLPFVKTVYISANFIALERFSI-VEWDDVKDEVAQQLVEYLNSGEPVI 96
>gi|429746393|ref|ZP_19279746.1| NifU-like protein [Capnocytophaga sp. oral taxon 380 str. F0488]
gi|429166342|gb|EKY08332.1| NifU-like protein [Capnocytophaga sp. oral taxon 380 str. F0488]
Length = 299
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 86/148 (58%), Gaps = 19/148 (12%)
Query: 49 SPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
+P+ K LF + ++ VFF ++I+VTK+D+ +W ++ P I I ++ S G +++
Sbjct: 142 APMAKALFTQFPFIEEVFFDDNYISVTKKDNK-EWAVVTPNIREFIKNYLSEGHMLIS-- 198
Query: 108 QPSSDTVIHED-----------DDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SS+ H+ DE + I ++D ++P V DGG+IQFIS+ +
Sbjct: 199 --SSEIKRHQQATQERLLSMVTTDEVSKQIVAIIDEFVKPAVASDGGNIQFISYNPETHY 256
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
V++ +QG+C+ CPSS +TLK G++ +L+
Sbjct: 257 VEVILQGACSGCPSSTLTLKKGIEVILK 284
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL- 104
A SPL K LF + VK+V+ +FI + K+ ++WK ++ E+ ++ + SG ++
Sbjct: 38 AKNSPLAKELFYLPFVKTVYISSNFIAL-KRFPIIEWKDVQEEVAQQVLFYLQSGREIVS 96
Query: 105 TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
T+ + ++ + ++K + + R+ PT+ E
Sbjct: 97 TEGEQKKVISVYTETTPNPSVMKFVANKRLVPTIIE 132
>gi|149369678|ref|ZP_01889530.1| thioredoxin-related protein [unidentified eubacterium SCB49]
gi|149357105|gb|EDM45660.1| thioredoxin-related protein [unidentified eubacterium SCB49]
Length = 306
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 80/165 (48%), Gaps = 24/165 (14%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T DF A +PL LF VK VF +++I+V K D +W + ++ I +
Sbjct: 132 TFDFKNIDDAKHAPLATALFNFPFVKEVFMSNNYISVMKYDI-AEWDEISMQLREFIRSY 190
Query: 97 FSSGLPVLTDA-----------------QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
G + TDA + SD + D+E I ++LD I+P V
Sbjct: 191 IEDGKEIFTDAMLNETIKEEQKAVASPTENGSDKSYSDIDNE----IMDILDEYIKPAVA 246
Query: 140 EDGGDIQFISFQGGV--VKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
DGG I F S+ VK+ +QG+C+ CPS+ VTLKNG++ ML+
Sbjct: 247 SDGGHIAFDSYDANTKTVKVILQGACSGCPSATVTLKNGIETMLR 291
Score = 44.7 bits (104), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 6/98 (6%)
Query: 10 IRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHD 69
I+PT E+ + F ++ +F + A SP+ + LF + VK+V+ +
Sbjct: 8 IQPTNNEN-----IVKFVANSFLTQAKSYEFKNIEEAVESPIAQQLFYLPFVKTVYISQN 62
Query: 70 FITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
FI + K + V W +++ E+ +I ++ SG PV+ ++
Sbjct: 63 FIAIEKY-NIVSWDMVQDEVAESINEYIESGKPVVNES 99
>gi|372222106|ref|ZP_09500527.1| NifU-like protein [Mesoflavibacter zeaxanthinifaciens S86]
Length = 298
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F A S L LF VK VF +++++TK D +W + EI I +F+
Sbjct: 132 EFKNIDEAKGSELASQLFHFPFVKEVFIDQNYVSITKYDV-AEWNEVTMEIREFIRAYFA 190
Query: 99 SGLPVLTDAQPSSDTVIHE-------DDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
G ++D S ++ DET Q I +L+ ++P V DGG+I F S+
Sbjct: 191 DGKDAVSDEALSKTKAANKVQAKPEVQQDETSQAIISILEEYVKPAVASDGGNIMFESYD 250
Query: 152 GGVVKLK--MQGSCTSCPSSVVTLKNGVQNMLQ 182
K+ +QG+C+ CPSS TLKNG++ ML+
Sbjct: 251 SETKKVNVILQGACSGCPSSTFTLKNGIETMLK 283
Score = 42.4 bits (98), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 58/103 (56%), Gaps = 2/103 (1%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F A SPL + LF + +K+V+ +F+ + ++ D V+W +K E+ ++++ +
Sbjct: 31 EFKNIDEAKKSPLAQQLFHLPFIKTVYISGNFVAM-ERFDIVEWNDVKDEVAQNLVEYLN 89
Query: 99 SGLP-VLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
+G P VL D++ ++ ++ + ++K +++ I PT+ E
Sbjct: 90 AGEPIVLEDSENNTPISVYAEVTPNPAVMKFVMNKVIVPTIFE 132
>gi|376316543|emb|CCF99932.1| protein containing nitrogen-fixing NifU domain [uncultured
Flavobacteriia bacterium]
Length = 196
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 6/143 (4%)
Query: 50 PLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQP 109
P+ LF + VF +FI + K + V+W + E+ I ++ ++G P+ +
Sbjct: 46 PIAARLFSFPFITKVFMSDNFIALNKTEH-VEWSDVHLELREYIANYLTAGHPIEDKSID 104
Query: 110 SSDTVIHEDD-----DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCT 164
V+ + T + I +LD +RP V DGG I F SF+ G + L ++G+C+
Sbjct: 105 LPKEVVEAKELVKPEGATEERIVSILDDHVRPAVAADGGAIDFKSFEDGKLTLTLKGACS 164
Query: 165 SCPSSVVTLKNGVQNMLQFYIPE 187
CPSS +TLK+G++N+ + +PE
Sbjct: 165 GCPSSTLTLKSGIENIFKQMMPE 187
>gi|323308188|gb|EGA61437.1| Nfu1p [Saccharomyces cerevisiae FostersO]
Length = 109
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 117 EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLK 174
E+D+E ++I+EL+DTRIRP + EDGGDI + + + G V L++QG+CTSC SS VTLK
Sbjct: 8 EEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGACTSCSSSEVTLK 67
Query: 175 NGVQNMLQFYIPE 187
G+++ML+ Y+ E
Sbjct: 68 YGIESMLKHYVDE 80
Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 16 LIEELIDTRIRPAILEDGGDIDY 38
>gi|146097555|ref|XP_001468136.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|134072503|emb|CAM71216.1| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 448
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query: 79 DVDWKLLKPEIFATIMDFFSSGLPVL--TDAQPSSDTVIHEDDDETVQMIKELLDTRIRP 136
+ DW LK + A + D SG P + + P +DTV E D E V MIKEL+ T IRP
Sbjct: 238 ETDWSELKLHVSALLTDHICSGNPHVDPSAPHPHADTVPEEGDSEVVLMIKELVSTTIRP 297
Query: 137 TVQEDGGDIQFISFQG--GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+Q+DGGD++F+ F G + +++ G+C +C SS TL + ++ + +IPE +
Sbjct: 298 QLQDDGGDLRFVGFDPVLGDMHVELLGACRTCKSSKTTLVDLIERTTRHWIPEVS 352
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
MIKEL+ T IRP +Q+DGGD++F+ F D VL
Sbjct: 286 MIKELVSTTIRPQLQDDGGDLRFVGF-DPVL 315
>gi|392398193|ref|YP_006434794.1| thioredoxin-like protein [Flexibacter litoralis DSM 6794]
gi|390529271|gb|AFM05001.1| thioredoxin-like protein [Flexibacter litoralis DSM 6794]
Length = 199
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 97/170 (57%), Gaps = 12/170 (7%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFR-IEGVKSVFFGHDFITVTKQDDD 79
+ F+ DG+++ D+ T + SPL LF + V+ VF +FIT+TK ++
Sbjct: 30 MSFMLMADGIVK------DYATKEDTTDSPLAATLFNEFDFVERVFLSKNFITITKTEN- 82
Query: 80 VDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
V+W + + + D+F + PV ++ P D+ + +DD T+ IK++LD IRP V+
Sbjct: 83 VEWVEINSILRNYLKDYFEAQKPVFSEDLP--DSKVELNDDPTIARIKDILDQYIRPAVE 140
Query: 140 EDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGG I F F + G + + +QGSC+ CPSS +TLK G+QN+ +PE
Sbjct: 141 MDGGAISFSEFDKETGKLSVLLQGSCSGCPSSSITLKAGIQNLFSNMMPE 190
>gi|398021435|ref|XP_003863880.1| hypothetical protein, conserved [Leishmania donovani]
gi|322502114|emb|CBZ37197.1| hypothetical protein, conserved [Leishmania donovani]
Length = 448
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query: 79 DVDWKLLKPEIFATIMDFFSSGLPVL--TDAQPSSDTVIHEDDDETVQMIKELLDTRIRP 136
+ DW LK + A + D SG P + + P +DTV E D E V MIKEL+ T IRP
Sbjct: 238 ETDWSELKLHVSALLTDHICSGNPHVDPSAPHPHADTVPEEGDSEVVLMIKELVSTTIRP 297
Query: 137 TVQEDGGDIQFISFQG--GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+Q+DGGD++F+ F G + +++ G+C +C SS TL + ++ + +IPE +
Sbjct: 298 QLQDDGGDLRFVGFDPVLGDMHVELLGACRTCKSSKTTLVDLIERTTRHWIPEVS 352
Score = 40.8 bits (94), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKEL+ T IRP +Q+DGGD++F+ F
Sbjct: 286 MIKELVSTTIRPQLQDDGGDLRFVGF 311
>gi|305665213|ref|YP_003861500.1| NifU-like protein [Maribacter sp. HTCC2170]
gi|88709966|gb|EAR02198.1| nifU related protein [Maribacter sp. HTCC2170]
Length = 300
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 10/153 (6%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F A S L + LF++ VK VFF ++++V K D +W+ + + + DF +
Sbjct: 134 EFKNIDEAKDSALAQQLFQLPFVKEVFFDENYVSVNKFDV-AEWEDITMPLREMVRDFLA 192
Query: 99 SGLPVLT-------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ 151
G V+T A+ + +E D+T + I ++L+ ++P V DGG+I F S++
Sbjct: 193 EGNEVVTVSAITLKSAEAPKSQLNNESLDDTSKQIVDILEEYVKPAVASDGGNILFQSYE 252
Query: 152 G--GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
V + +QG+C+ CPSS TLKNG++ ML+
Sbjct: 253 KDTKTVNVILQGACSGCPSSTFTLKNGIETMLK 285
Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+F A SPL + LF + +K+V+F +FI + ++ D V+W +K E+ ++
Sbjct: 28 NNNYEFKNIDEAKNSPLAQQLFYLPFIKTVYFSGNFIGL-ERFDIVEWADVKDEVAQQLV 86
Query: 95 DFFSSGLPVLTDAQPSSDT--VIHEDDDETVQMIKELLDTRIRPTVQE 140
++ +SG P++ + + ++ + ++K + + RI PT E
Sbjct: 87 EYLNSGEPIVIEEEQGKKVPITVYAEVTPNPSVMKFVSNKRIVPTAFE 134
>gi|407409888|gb|EKF32544.1| hypothetical protein MOQ_003599 [Trypanosoma cruzi marinkellei]
Length = 428
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 82 WKLLKPEIFATIMDFFSSGLP-VLTDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
W LK + + D SG P V DA P DT+ E D E V ++KEL+ T IRP +Q
Sbjct: 276 WSELKLHVSELLTDHLFSGRPHVDPDAPHPHPDTLPQEGDSEVVLILKELISTTIRPQLQ 335
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI+F+S +G V+ ++M G+C C SS TL + ++ + ++PE
Sbjct: 336 LDGGDIRFVSLEGAVMYVEMLGACRRCKSSKTTLSDLIERTTRHWVPE 383
Score = 39.3 bits (90), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
++KEL+ T IRP +Q DGGDI+F+S + V+
Sbjct: 321 ILKELISTTIRPQLQLDGGDIRFVSLEGAVM 351
>gi|399544988|ref|YP_006558296.1| hypothetical protein MRBBS_1946 [Marinobacter sp. BSs20148]
gi|399160320|gb|AFP30883.1| hypothetical protein MRBBS_1946 [Marinobacter sp. BSs20148]
Length = 211
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
PG F + A SPLG+ LF + GV +V +TV K + W LK +I
Sbjct: 34 HPGGPFFFGNKERAVGSPLGEQLFALTGVANVLIADSVVTVCK-EPTASWSGLKADIGMA 92
Query: 93 IMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
I SG+P + + P + + D E ++ELLD + ++ GG I + +
Sbjct: 93 IRTQLRSGVPAILE-MPVDNRRQGKTDAELTTAVQELLDKEVNRSIANHGGKISIVGVRQ 151
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G + + M G C C SS VTL+ G + ML+ PE
Sbjct: 152 GKLSITMSGGCQGCASSQVTLRQGFEVMLKRVAPE 186
>gi|402831473|ref|ZP_10880156.1| scaffold protein Nfu/NifU N-terminal domain protein [Capnocytophaga
sp. CM59]
gi|402281871|gb|EJU30489.1| scaffold protein Nfu/NifU N-terminal domain protein [Capnocytophaga
sp. CM59]
Length = 297
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+ ++ + + A SPL LF++ +K VFF ++I++ +Q V W+ + E+ +
Sbjct: 133 SRVYEYKSPEEAAESPLATELFKLPYIKEVFFDSNYISIIRQPR-VLWEDIMMELREFLR 191
Query: 95 DFFSSGLPVLTDAQPSSDTV--IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-- 150
+ G PV+ + D + D + I +LD ++P V DGG+IQF+S+
Sbjct: 192 LYLMEGKPVVKVSVTEQDRPKGLPSLGDVYSRKIVAILDQYVKPAVSSDGGNIQFVSYDK 251
Query: 151 QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
Q VVK+ +QG+C CPSS TLK G++ +L+
Sbjct: 252 QNQVVKVLLQGACNGCPSSKRTLKQGIETILR 283
>gi|85818185|gb|EAQ39345.1| NifU-like protein [Dokdonia donghaensis MED134]
Length = 300
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ 108
+P+ K LF VK VFF ++I+V K D +W + E I D+ G ++T Q
Sbjct: 144 APMAKALFHFPFVKEVFFDENYISVQKYDM-AEWDEVVTETREFIRDYIQDGKEIVTAEQ 202
Query: 109 ---PSSDTVIHEDDDETV----QMIKELLDTRIRPTVQEDGGDIQFISFQGGV--VKLKM 159
P I E+ ET+ + I +++ ++P V DGG+I F + V + +
Sbjct: 203 LKTPQQVDAIAEEKFETLDDVSKEIVNIIEEYVKPAVASDGGNIVFKHYDEKTQNVSVIL 262
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQFYIP 186
QG+C+ CPSS TLKNG++NML+ +P
Sbjct: 263 QGACSGCPSSTFTLKNGIENMLKQMLP 289
>gi|399023311|ref|ZP_10725374.1| thioredoxin-like protein [Chryseobacterium sp. CF314]
gi|398083161|gb|EJL73884.1| thioredoxin-like protein [Chryseobacterium sp. CF314]
Length = 292
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 83/145 (57%), Gaps = 8/145 (5%)
Query: 50 PLGKLLFR-IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT-DA 107
PL + +F+ + K VF +F+ VT+ D+ V+W + + A I ++ +G + +A
Sbjct: 139 PLAQAIFKEFDFAKEVFISDNFVAVTR-DNSVEWHQVMMAVRALIAEYLQNGGEISNIEA 197
Query: 108 QPSSDTV---IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGS 162
Q + V I+ + + Q I ++L+ + P V+ DGG I + + + K+ +QG+
Sbjct: 198 QKHENPVEKIINREYTDDEQKISDILNEYVAPAVENDGGKISLMEYDQKHKTAKMLLQGA 257
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPE 187
C+ CPSS TLKNG++N+L+ ++P+
Sbjct: 258 CSGCPSSTATLKNGIENILKQFVPD 282
>gi|372209049|ref|ZP_09496851.1| nifU related protein [Flavobacteriaceae bacterium S85]
Length = 297
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
++ + + SPL +LF V+ V+ +++++ K +D + W+ + P++ + + ++
Sbjct: 134 EYKSAKETKNSPLASVLFEFPFVEEVYISENYVSIAK-NDLITWQEVIPQLRSFLKEYLE 192
Query: 99 SGLPVL--TDAQPSSD---TVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
S ++ + AQP + T I + ++++ K +LD ++P V DGG+I F S+
Sbjct: 193 SDKLIIDTSIAQPKATIKATPIEHLEGVSLEIAK-ILDEHVKPAVANDGGNIVFQSYDAE 251
Query: 154 V--VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
V + +QG+C+ CPSS +TLKNG++ ML+ +P
Sbjct: 252 TQNVHVVLQGACSGCPSSTITLKNGIETMLKEMLP 286
>gi|126668356|ref|ZP_01739314.1| hypothetical protein MELB17_13022 [Marinobacter sp. ELB17]
gi|126627172|gb|EAZ97811.1| hypothetical protein MELB17_13022 [Marinobacter sp. ELB17]
Length = 211
Score = 83.2 bits (204), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 2/155 (1%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
PG F + A SPLG+ LF + GV ++ +TV K + W LK I
Sbjct: 34 HPGGPFFFGNKERAVGSPLGEQLFALPGVANLLIADSVVTVCK-EPAASWSGLKAGIGMA 92
Query: 93 IMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG 152
I SG+P + + P+ + + D E ++ELLD + ++ GG I + +
Sbjct: 93 IRTQLRSGVPAILE-MPAHNRRQGKTDAELTTAVQELLDKEVNRSIANHGGKISIVGVRQ 151
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G + + M G C C SS VTL+ G + ML+ PE
Sbjct: 152 GKLSITMSGGCQGCASSQVTLRQGFEVMLKRVAPE 186
>gi|397690175|ref|YP_006527429.1| nitrogen-fixing protein NifU [Melioribacter roseus P3M]
gi|395811667|gb|AFN74416.1| putative nitrogen-fixing protein NifU [Melioribacter roseus P3M]
Length = 181
Score = 82.8 bits (203), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T F + + A PL K +F I GV SVF+ FIT+ K+ W ++ + I +
Sbjct: 28 ETRSFQSKEEAENDPLAKGIFEIPGVVSVFYMDKFITIEKEPS-ASWGQIQKPLVEFIKN 86
Query: 96 FFSSGLPVLTDAQPSSDT--VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG 153
F S +P P S+ V E++ E ++ I ++++TR+RP + DGG ++ +G
Sbjct: 87 FDKSLIP------PESELPGVSSEEETELLKKINDVINTRVRPALAGDGGGLEIRGLEGY 140
Query: 154 VVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
+K++ QG+C SCPS++ ++N+L+
Sbjct: 141 TLKIRYQGACGSCPSAIRGTLIAIENLLK 169
>gi|149912092|ref|ZP_01900681.1| hypothetical protein PE36_11562 [Moritella sp. PE36]
gi|149804829|gb|EDM64868.1| hypothetical protein PE36_11562 [Moritella sp. PE36]
Length = 215
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 33 EPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
PG F + A SPLG+ LF + GV +V +T+ K + W LK I
Sbjct: 34 HPGGPFFFANKERAAGSPLGEQLFALPGVANVLIAESIVTICK-EPTASWSGLKAAIGTA 92
Query: 93 IMDFFSSGLPVLTDAQPSSDT---VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFIS 149
I +G+P + + +DT + D E + +I+ LLD I ++ GG I +
Sbjct: 93 IRAQLLTGVPAILEMYIHTDTQTGMQRRSDAELITVIQGLLDKEINRSIANHGGKISIVE 152
Query: 150 FQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G + + M G C C S+ VTL+ G + ML+ PE
Sbjct: 153 IRQGKLYISMSGGCQGCASAQVTLRQGFEVMLKRVAPE 190
>gi|298206804|ref|YP_003714983.1| NifU-like domain-containing protein [Croceibacter atlanticus
HTCC2559]
gi|83849436|gb|EAP87304.1| NifU-like domain protein [Croceibacter atlanticus HTCC2559]
Length = 305
Score = 82.4 bits (202), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 86/161 (53%), Gaps = 15/161 (9%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
Q+ +F + +PL + LF VK +F +++++ K D +W + E+ I
Sbjct: 131 QSEEFKSIDDTANAPLAQALFNFPFVKEIFIDENYVSIQKYDM-AEWGDITTELRDFISQ 189
Query: 96 FFSSGLPVLTDAQ-----PSSDTVIHEDD-------DETVQMIKELLDTRIRPTVQEDGG 143
SG PV+T+ + P ++ E D+T + I E+LD I+P V DGG
Sbjct: 190 HIMSGKPVVTEHRANKLAPQTNGGTTEKPQLDLSHLDDTSKAIVEILDEYIKPAVASDGG 249
Query: 144 DIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
+I F S+ + VK+ +QG+C+ CPSS +TLKNG++ ML+
Sbjct: 250 NIMFDSYDEETKSVKVILQGACSGCPSSTMTLKNGIETMLR 290
Score = 43.5 bits (101), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ +F A SPL + LF + VK+V+ +FI + K D +W ++ E+ + I+++
Sbjct: 29 SFEFHNIDEAKPSPLAQKLFYLPFVKTVYIAQNFIAIQKY-DIAEWSDVQDEVKSQILEY 87
Query: 97 FSSGLPVLTDAQPSSDTV 114
+SG V+ D P +V
Sbjct: 88 LNSGEDVIIDKTPQKKSV 105
>gi|150026140|ref|YP_001296966.1| hypothetical protein FP2102 [Flavobacterium psychrophilum JIP02/86]
gi|149772681|emb|CAL44164.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 298
Score = 82.4 bits (202), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 81/147 (55%), Gaps = 14/147 (9%)
Query: 47 YCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD 106
+ SPL K LF+ VK +F +++++TK +W+ + E+ I +F +G V+ +
Sbjct: 140 HASPLAKELFKFPFVKEIFIDENYLSITKYAV-AEWQEITLELRTFIKEFIENGKIVVDE 198
Query: 107 AQPSSDTVIHEDDDE---------TVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVV 155
+ + HE+ E T Q I +++ IRP V DGG+I F S+ V
Sbjct: 199 TKIVATK--HEEKQEITNFDNLDVTSQKIINIIEEYIRPAVAADGGNILFDSYCQDTKQV 256
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
K+ +QG+C+ CPSS TLKNG+++ML+
Sbjct: 257 KVILQGACSGCPSSTFTLKNGIESMLK 283
Score = 39.3 bits (90), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 28/127 (22%), Positives = 59/127 (46%), Gaps = 3/127 (2%)
Query: 16 EDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTK 75
+D + + F+ P Q+ ++ A SPL + LF + VK+V+ +FI + K
Sbjct: 7 KDTNNPNILKFEFSYFITPNQSYEYKNIDEAGASPLAQQLFYLPFVKTVYISGNFIAIEK 66
Query: 76 QDDDVDWKLLKPEIFATIMDFFSSGLPVL--TDAQPSSDTVIHEDDDETVQMIKELLDTR 133
+ V W+ +K ++ + F S+G V+ T+ S ++ + ++K + +
Sbjct: 67 Y-NIVQWEDVKHDVADQMEAFVSNGGEVVKQTETPKKSPVTVYAESTPNPAVMKFVASKK 125
Query: 134 IRPTVQE 140
+ T+ E
Sbjct: 126 LTKTIVE 132
>gi|157874760|ref|XP_001685794.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68128867|emb|CAJ06031.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 426
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 79 DVDWKLLKPEIFATIMDFFSSGLPVL--TDAQPSSDTVIHEDDDETVQMIKELLDTRIRP 136
+ DW LK + A + D SG P + + P +DT E D E V MIKEL+ T IRP
Sbjct: 216 ETDWSELKLHVSALLTDHICSGNPHVDPSAPHPHADTAPEEGDSEVVLMIKELVSTTIRP 275
Query: 137 TVQEDGGDIQFISFQG--GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+Q+DGGD++F+ F G + +++ G+C +C SS TL + ++ + +IPE +
Sbjct: 276 QLQDDGGDLRFVGFDPVLGDMHVELLGACRTCKSSKTTLVDLIERTTRHWIPEVS 330
Score = 40.8 bits (94), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKEL+ T IRP +Q+DGGD++F+ F
Sbjct: 264 MIKELVSTTIRPQLQDDGGDLRFVGF 289
>gi|401427634|ref|XP_003878300.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494548|emb|CBZ29850.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 426
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 68/113 (60%), Gaps = 4/113 (3%)
Query: 79 DVDWKLLKPEIFATIMDFFSSGLPVL--TDAQPSSDTVIHEDDDETVQMIKELLDTRIRP 136
+ DW LK + A + D SG P + + + P +DT+ E D E V +IKEL+ T IRP
Sbjct: 216 ETDWSELKLHVSALLTDHICSGNPHVDPSSSHPHADTLPEEGDSEVVLLIKELVSTTIRP 275
Query: 137 TVQEDGGDIQFISFQG--GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+Q+DGGD++F+ F G + +++ G+C +C SS TL + ++ + +IPE
Sbjct: 276 QLQDDGGDLRFVGFDPVLGDMHVELLGACRTCKSSKTTLVDLIERTTRHWIPE 328
Score = 39.7 bits (91), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
+IKEL+ T IRP +Q+DGGD++F+ F
Sbjct: 264 LIKELVSTTIRPQLQDDGGDLRFVGF 289
>gi|365959965|ref|YP_004941532.1| hypothetical protein FCOL_04540 [Flavobacterium columnare ATCC
49512]
gi|365736646|gb|AEW85739.1| hypothetical protein FCOL_04540 [Flavobacterium columnare ATCC
49512]
Length = 297
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 10/144 (6%)
Query: 48 CSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
SPL K LF VK VF +++++TK +W+ + E+ I +F G + +
Sbjct: 140 ASPLAKALFSFPYVKEVFIDENYVSITKYTVS-EWQEVTNELRTFIKEFIEKGNIAVDET 198
Query: 108 ------QPSSDTVIHEDD-DETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLK 158
Q + + D+ D T Q I +++ I+P V DGG+I F S+ + VK+
Sbjct: 199 KITVLQQQEKQQISNFDNLDSTSQKIINIIEEYIKPAVASDGGNILFDSYTEEDKKVKVV 258
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQ 182
+QG+C+ CPSS TLKNG++NML+
Sbjct: 259 LQGACSGCPSSTFTLKNGIENMLK 282
Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 34 PGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI 93
P Q+ +F SPL K LF + VK+V+ +FI + K V+W +K ++ +
Sbjct: 25 PNQSFEFKNVDECADSPLAKQLFYLPFVKTVYISGNFIAIEK-FSIVEWNDVKHDVAEQL 83
Query: 94 MDFFSSGLPVLTDAQ 108
++ ++G V+ + +
Sbjct: 84 ENYVNAGGSVIIEKE 98
>gi|225012214|ref|ZP_03702651.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-2A]
gi|225003769|gb|EEG41742.1| nitrogen-fixing NifU domain protein [Flavobacteria bacterium
MS024-2A]
Length = 295
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 85/158 (53%), Gaps = 8/158 (5%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
+++F A +PL + LF + VK VF +++++TK + +W+ + E+ I
Sbjct: 129 SHSVEFKNIDEAKNAPLAQKLFHLPFVKEVFIDANYVSITK-FEVTEWEEVVMEVREFIR 187
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDE----TVQMIKELLDTRIRPTVQEDGGDIQFISF 150
F G +LT+A P + + ++ T + I +LD I+P V DGG+I F S+
Sbjct: 188 AFIEEGNVILTEA-PIAIEIDQKNQSSNLTATEEQIVSILDEYIKPAVASDGGNIMFDSY 246
Query: 151 QG--GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
V + +QG+C+ CPSS TLKNG++ ML+ +P
Sbjct: 247 DEVEKEVHVVLQGACSGCPSSTFTLKNGIETMLKEMMP 284
>gi|86140721|ref|ZP_01059280.1| NifU-like domain protein [Leeuwenhoekiella blandensis MED217]
gi|85832663|gb|EAQ51112.1| NifU-like domain protein [Leeuwenhoekiella blandensis MED217]
Length = 301
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 10/156 (6%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T++F A +PL LF VK VF ++++V K D +W + E+ I
Sbjct: 132 ETLEFKNIDEAKNAPLALALFHFPFVKEVFMDSNYVSVQKYDV-AEWDDVFQEVREFIKT 190
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDD-------DETVQMIKELLDTRIRPTVQEDGGDIQFI 148
+ G ++++ + + E D+T + I +++ ++P V DGG+I F
Sbjct: 191 YIEEGKEIISENFKKTPQAVEEQKEVEFEAMDDTSKEIANIIEEYVKPAVASDGGNILFK 250
Query: 149 SF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
+ + VK+ +QG+C+ CPSS TLKNG++NML+
Sbjct: 251 HYDPESKNVKVILQGACSGCPSSTFTLKNGIENMLK 286
>gi|423317296|ref|ZP_17295201.1| hypothetical protein HMPREF9699_01772 [Bergeyella zoohelcum ATCC
43767]
gi|405581429|gb|EKB55458.1| hypothetical protein HMPREF9699_01772 [Bergeyella zoohelcum ATCC
43767]
Length = 292
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 17/168 (10%)
Query: 28 DGVLEEPG--QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLL 85
DG LE ++ D P +A +L + + VF +F+ VTK D V W +
Sbjct: 124 DGFLEAKSLEESKDIPLAEA--------VLKEFDFAQEVFISDNFVAVTK-DHSVQWHEV 174
Query: 86 KPEIFATIMDFFSSGLPVLT-DAQPSSDTV---IHEDDDETVQMIKELLDTRIRPTVQED 141
+ + I ++ G V AQP + V ++ + E Q I+++L+ + P V+ D
Sbjct: 175 MVPVRSFIAEYLQEGKTVANIPAQPHENPVEKILNREYTEDEQKIQDILNEYVAPAVEND 234
Query: 142 GGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GG I + + + V K+ +QG+C+ CPSS TLK G++N+L+ ++PE
Sbjct: 235 GGKISLLEYDAEAKVAKMLLQGACSGCPSSTATLKGGIENVLKQFLPE 282
>gi|256820781|ref|YP_003142060.1| nitrogen-fixing NifU domain-containing protein [Capnocytophaga
ochracea DSM 7271]
gi|256582364|gb|ACU93499.1| nitrogen-fixing NifU domain protein [Capnocytophaga ochracea DSM
7271]
Length = 299
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 85/148 (57%), Gaps = 19/148 (12%)
Query: 49 SPLGKLLF-RIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA 107
+P+ K LF + ++ VFF ++I+VTK+D+ +W ++ I I ++ S G +++
Sbjct: 142 APMAKALFTQFPFIEEVFFDDNYISVTKKDNK-EWAMVTSNIREFIKNYLSEGHILIS-- 198
Query: 108 QPSSDTVIHED-----------DDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGV 154
SS+ H+ DE + I ++D ++P V DGG+IQFIS+ +
Sbjct: 199 --SSEIKRHQQATQERLLSMVTTDEVSKQIIAIIDEFVKPAVASDGGNIQFISYNPETHY 256
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
V++ +QG+C+ CPSS +TLK G++ +L+
Sbjct: 257 VEVILQGACSGCPSSTLTLKKGIEVILK 284
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL- 104
A SPL K LF + VK+V+ +FI + K+ ++WK ++ E+ ++ + SG ++
Sbjct: 38 AKNSPLAKELFYLPFVKTVYISSNFIAL-KRFPIIEWKDVQEEVAQQVLLYLQSGREIVS 96
Query: 105 TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
T+ + ++ + ++K + + R+ PT+ E
Sbjct: 97 TEGEQKKVISVYTETTPNPSVMKFVANKRLVPTIIE 132
>gi|366988867|ref|XP_003674201.1| hypothetical protein NCAS_0A12630 [Naumovozyma castellii CBS 4309]
gi|342300064|emb|CCC67821.1| hypothetical protein NCAS_0A12630 [Naumovozyma castellii CBS 4309]
Length = 266
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 86/158 (54%), Gaps = 19/158 (12%)
Query: 48 CSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTD- 106
C K+ G +S+ G DF++V K D V W + PE+ +++ SG V++D
Sbjct: 74 CKLAKKIFEDCPGAESLMIGDDFVSVNK-DSMVHWNQITPEVTKILLNHLQSGESVISDD 132
Query: 107 ---AQPSSDTV------------IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
+ +S+ ED E +I EL+DTRIRP + EDGGD+ ++ +
Sbjct: 133 FHAIREASEQAGGGYKVNTPKFEYDEDAQEVSDIIDELIDTRIRPAILEDGGDVDYLGWD 192
Query: 151 -QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ G V L+++GSC+SC SS VTLK G+++ML Y+ E
Sbjct: 193 PKNGTVYLRLKGSCSSCSSSEVTLKYGIESMLMHYVDE 230
Score = 38.1 bits (87), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 21/26 (80%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
+I EL+DTRIRP + EDGGD+ ++ +
Sbjct: 166 IIDELIDTRIRPAILEDGGDVDYLGW 191
>gi|340618381|ref|YP_004736834.1| NifU-like protein [Zobellia galactanivorans]
gi|339733178|emb|CAZ96553.1| NifU-like protein [Zobellia galactanivorans]
Length = 304
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 86/156 (55%), Gaps = 13/156 (8%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F A S L K LF VK VFF ++++V+K D +W+ + ++ I ++ +
Sbjct: 135 EFKNIDEAKNSELAKQLFTFPFVKEVFFDLNYVSVSKYDV-AEWEDVTMQLREHIREYLA 193
Query: 99 SGLPVLTD-----AQPSSDTV-----IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
+G +++ + +SDT + D+T Q I ++L+ ++P V DGG+I F
Sbjct: 194 NGNEAVSEDAIAATKEASDTTSAPTQATPELDDTSQQIVDILEEYVKPAVASDGGNILFQ 253
Query: 149 SFQ--GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
S++ V + +QG+C+ CPSS TLKNG++ ML+
Sbjct: 254 SYEEESKTVNVILQGACSGCPSSTFTLKNGIETMLK 289
Score = 38.9 bits (89), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
+ F+ + +F A SPL + LF + +K+V+ +FI + + D V W
Sbjct: 17 LKFETNHFLTKSKNYEFKNIDEAKNSPLAQQLFYLPFIKTVYISGNFIGLERYDI-VTWD 75
Query: 84 LLKPEIFATIMDFFSSGLPVLTDAQPSSDTV 114
+K E+ ++D+ ++G P++ + + + V
Sbjct: 76 DVKDEVAQQLVDYLNAGEPIVNEVEETVKKV 106
>gi|406674185|ref|ZP_11081396.1| hypothetical protein HMPREF9700_01938 [Bergeyella zoohelcum CCUG
30536]
gi|405584596|gb|EKB58486.1| hypothetical protein HMPREF9700_01938 [Bergeyella zoohelcum CCUG
30536]
Length = 292
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 87/168 (51%), Gaps = 17/168 (10%)
Query: 28 DGVLEEPG--QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLL 85
DG LE ++ D P +A +L + + VF +F+ VTK D V W +
Sbjct: 124 DGFLEAKSLEESKDIPLAEA--------VLKEFDFAQEVFISDNFVAVTK-DHSVQWHEV 174
Query: 86 KPEIFATIMDFFSSGLPVLT-DAQPSSDTV---IHEDDDETVQMIKELLDTRIRPTVQED 141
+ + I ++ G V AQP + V ++ + E Q I+++L+ + P V+ D
Sbjct: 175 MVPVRSFIAEYLQEGKTVANIPAQPHENPVEKILNREYTEDEQKIQDILNEYVAPAVEND 234
Query: 142 GGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GG I + + + + K+ +QG+C+ CPSS TLK G++N+L+ ++PE
Sbjct: 235 GGKISLLEYDSENKIAKMLLQGACSGCPSSTATLKGGIENVLKQFLPE 282
>gi|386819806|ref|ZP_10107022.1| thioredoxin-like protein [Joostella marina DSM 19592]
gi|386424912|gb|EIJ38742.1| thioredoxin-like protein [Joostella marina DSM 19592]
Length = 305
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 89/175 (50%), Gaps = 18/175 (10%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F+S + VL T +F + A SPL LF VK VF ++I++ K D
Sbjct: 121 LKFVSNKKLVL----STYEFKNIEEAKDSPLASGLFHFPFVKEVFIDENYISILKYDI-A 175
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHE-----------DDDETVQMIKEL 129
+W + E+ I G +++D S T E + D+T + I ++
Sbjct: 176 EWDDIVVELREYIRLHIEEGKDIVSDNAQSKTTDAAETPNNNKSVDTSNLDDTSKQIIDI 235
Query: 130 LDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
L+ ++P V DGG+I F S+ + V + +QG+C+ CPSS TLKNG+++ML+
Sbjct: 236 LEEYVKPAVASDGGNILFQSYDEESKTVSVILQGACSGCPSSTFTLKNGIESMLK 290
Score = 42.0 bits (97), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
I F+ Q +F A SPL K LF + K+V+ +F+ + + D V+W
Sbjct: 17 IKFEANKFLTRKQNYEFKNVDDAKNSPLAKQLFYLPFTKTVYISGNFVAIERYDI-VEWA 75
Query: 84 LLKPEIFATIMDFFSSGLPVLT--DAQPS 110
++ E+ I ++ +SG PV+ D PS
Sbjct: 76 DVQDEVAEQIENYLNSGEPVIIEDDTTPS 104
>gi|213962175|ref|ZP_03390439.1| nitrogen-fixing NifU domain protein [Capnocytophaga sputigena
Capno]
gi|213955181|gb|EEB66499.1| nitrogen-fixing NifU domain protein [Capnocytophaga sputigena
Capno]
Length = 300
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 95/170 (55%), Gaps = 17/170 (10%)
Query: 38 IDFPTGQAAYCSPLGK-LLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
I++ + + A +P+ LL R ++ VFF ++I++TK+ + +W+++ ++ I +
Sbjct: 133 IEYKSIEEATEAPMAATLLTRFPFIEEVFFDDNYISLTKKGME-EWEMIAADLRDYIRKY 191
Query: 97 FSSGLPVLT---------DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
S G P++ +AQ +++ DE Q I +++ ++P V DGG+IQF
Sbjct: 192 LSEGRPIINPSEIKRRQEEAQARLLSMV--TTDEISQQIVAIIEQYVKPAVASDGGNIQF 249
Query: 148 ISFQGGV--VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNME 195
IS+ V++ +QG+C+ CPSS TLK G++ +L+ + P +N+E
Sbjct: 250 ISYNRDTHHVEVLLQGACSGCPSSTQTLKKGIEVILKDKL--NNPLINVE 297
Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ +F A +PL K LF + VK+V+ +FI + K+ V+WK ++ E+ ++ +
Sbjct: 29 SYEFKNIDEAKNAPLAKELFYLPFVKTVYISSNFIAL-KRFPIVEWKEVQEEVAQQVLVY 87
Query: 97 FSSGLPVL--TDAQPSSDTV-IHEDDDETVQMIKELLDTRIRPTVQE 140
SG +L +P + + ++ + ++K + + R+ PTV E
Sbjct: 88 LQSGKDILLGEARKPMGEAITVYTETTPNPTVMKFVANKRLVPTVIE 134
>gi|154343762|ref|XP_001567825.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065159|emb|CAM40585.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 431
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 81 DWKLLKPEIFATIMDFFSSGLPVL--TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTV 138
DW LK + A + D SG P + P +DTV D E V MIKEL+ T IRP +
Sbjct: 223 DWSELKFHVSALLTDHICSGNPHVDPNAPNPHADTVAEAGDSEIVLMIKELVATTIRPQL 282
Query: 139 QEDGGDIQFISFQG--GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
QEDGGD++F+ F G +++++ G+C +C +S L + ++ + +IPE
Sbjct: 283 QEDGGDLRFVGFDPVLGDMRVELLGACRTCKNSKTALVDLIERTTRHWIPE 333
Score = 42.4 bits (98), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF 26
MIKEL+ T IRP +QEDGGD++F+ F
Sbjct: 269 MIKELVATTIRPQLQEDGGDLRFVGF 294
>gi|340057690|emb|CCC52037.1| putative HIRA-interacting protein 5 [Trypanosoma vivax Y486]
Length = 359
Score = 79.7 bits (195), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Query: 82 WKLLKPEIFATIMDFFSSGLPVL--TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
W LK + A + D SG P + + P DT+ E D E V M+KEL+ IRP +Q
Sbjct: 240 WSDLKLHVSALLTDHLYSGRPHVDVSAPHPHPDTLPQEGDSELVLMLKELIVEFIRPQLQ 299
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI+F+ G V+ ++M G+C C SS TL + ++ + ++PE
Sbjct: 300 HDGGDIRFVGLDGPVMLVEMLGACRKCRSSKTTLHDLIERTTRHWLPE 347
>gi|71748540|ref|XP_823325.1| HIRA-interacting protein 5 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70832993|gb|EAN78497.1| HIRA-interacting protein 5, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 243
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 82 WKLLKPEIFATIMDFFSSGLPVL-TDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
W LK + A + D SG + DA P DT+ + D E V ++KEL+ T IRP +Q
Sbjct: 115 WSELKLHVSALLTDHLYSGRAHIDADAPHPHPDTIPQDGDSEVVVVLKELISTTIRPQLQ 174
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI+F+ V+ ++M G+C C SS TL++ ++ + ++PE
Sbjct: 175 ADGGDIRFVGLADSVMLVEMLGACRKCRSSKTTLRDMIERTTRHWVPE 222
Score = 40.0 bits (92), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
++KEL+ T IRP +Q DGGDI+F+ D V+
Sbjct: 160 VLKELISTTIRPQLQADGGDIRFVGLADSVM 190
>gi|261333257|emb|CBH16252.1| HIRA-interacting protein 5, putative [Trypanosoma brucei gambiense
DAL972]
Length = 337
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Query: 82 WKLLKPEIFATIMDFFSSGLPVL-TDA-QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQ 139
W LK + A + D SG + DA P DT+ + D E V ++KEL+ T IRP +Q
Sbjct: 209 WSELKLHVSALLTDHLYSGRAHIDADAPHPHPDTIPQDGDSEVVVVLKELISTTIRPQLQ 268
Query: 140 EDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
DGGDI+F+ V+ ++M G+C C SS TL++ ++ + ++PE
Sbjct: 269 ADGGDIRFVGLADSVMLVEMLGACRKCRSSKTTLRDMIERTTRHWVPE 316
Score = 40.0 bits (92), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
++KEL+ T IRP +Q DGGDI+F+ D V+
Sbjct: 254 VLKELISTTIRPQLQADGGDIRFVGLADSVM 284
>gi|295132490|ref|YP_003583166.1| nifU related protein [Zunongwangia profunda SM-A87]
gi|294980505|gb|ADF50970.1| nifU related protein [Zunongwangia profunda SM-A87]
Length = 309
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 87/181 (48%), Gaps = 25/181 (13%)
Query: 21 IQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDV 80
++F++ + VL +F A SPL + LF VK VF +++++ K D
Sbjct: 120 MKFVANRKLVL----HAAEFKNIDDAAESPLAQKLFHFPFVKEVFIDENYVSINKYDV-A 174
Query: 81 DWKLLKPEIFATIMDFFSSGLPVLTD-----------------AQPSSDTVIHEDDDETV 123
W + E+ I +F G VL + P I E DD T
Sbjct: 175 SWDEITMELREFIRNFIQEGNSVLNNDAITGAPEGKNGSETSKTAPKPQINIDELDD-TS 233
Query: 124 QMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
Q + +L+ I+P V DGG+I F S+ + VK+ +QG+C+ CPSS +TLK+G++ ML
Sbjct: 234 QQVVAILEEYIKPAVASDGGNILFDSYNEESRTVKVILQGACSGCPSSTMTLKSGIETML 293
Query: 182 Q 182
+
Sbjct: 294 R 294
>gi|313206892|ref|YP_004046069.1| nitrogen-fixing nifu domain-containing protein [Riemerella
anatipestifer ATCC 11845 = DSM 15868]
gi|383486204|ref|YP_005395116.1| nitrogen-fixing nifu domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|407451248|ref|YP_006722972.1| thioredoxin-like protein [Riemerella anatipestifer RA-CH-1]
gi|312446208|gb|ADQ82563.1| nitrogen-fixing NifU domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|380460889|gb|AFD56573.1| nitrogen-fixing nifu domain protein [Riemerella anatipestifer ATCC
11845 = DSM 15868]
gi|403312232|gb|AFR35073.1| Thioredoxin-like protein [Riemerella anatipestifer RA-CH-1]
Length = 292
Score = 79.0 bits (193), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 85/158 (53%), Gaps = 10/158 (6%)
Query: 38 IDFPTGQAAYCSPLGKLLFR-IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
++ + + A PL + +F+ + + VF +F+ VTK DD V W + A I ++
Sbjct: 127 VEVKSREEAAEVPLAQAIFKEFDFAQEVFISDNFVAVTK-DDSVQWHEVMVVTRAFIAEY 185
Query: 97 FSSGLPVLTDAQPSS-----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
+G V + +P + +I+ + +T Q I ++L+ + P V+ DGG I + +
Sbjct: 186 LQNGGEV-SHKEPQKHENPVEKIINREYTDTEQKISDILNEYVAPAVENDGGKISLMEYD 244
Query: 151 -QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
K+ +QG+C+ CPSS TLK G++N+L+ ++P+
Sbjct: 245 ESTKTAKMLLQGACSGCPSSTATLKGGIENVLKQFLPD 282
>gi|325955388|ref|YP_004239048.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
gi|323438006|gb|ADX68470.1| nitrogen-fixing NifU domain-containing protein [Weeksella virosa
DSM 16922]
Length = 295
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
Query: 38 IDFPTGQAAYCSPLGKLLFR-IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
I+ + + A P+ +F+ ++ VF ++I++TK D + W L ++ + ++ +
Sbjct: 127 IEIKSREKAQNVPIATAIFQEYPFIEEVFIAENYISLTKNDTE-SWDLWTMDVRSFVLSY 185
Query: 97 FSSGLPVLTDAQPSSDTVIHEDDDETV-------QMIKELLDTRIRPTVQEDGGDIQFIS 149
+ + D + HE +++ Q IK +LD ++P V DGG+I+ I
Sbjct: 186 LQTDGKIFNDDYEFVTEIPHEVAIKSIEEMTDVEQQIKAILDEYVQPAVANDGGNIELIE 245
Query: 150 F--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
F Q K+ +QG+C+ CPSS TLK+G++ +L+ +PE
Sbjct: 246 FDEQTKTAKMLLQGACSGCPSSTATLKHGIEGLLKQMLPE 285
>gi|409122617|ref|ZP_11222012.1| nifU related protein [Gillisia sp. CBA3202]
Length = 306
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 14/156 (8%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F A +PL + LF VK +F ++I++ K D +W+ + E+ I +
Sbjct: 138 EFKNIDATQNAPLARALFNFSYVKEIFIDENYISINKYDI-ANWEEIAMELREFITKYIQ 196
Query: 99 SGLPVL----------TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFI 148
G ++ A + D D + Q+I E+L+ I+P V DGG+I F
Sbjct: 197 DGKDIVLKETLKKEQENKAVATGDKKPENLDPVSTQVI-EILEEYIKPAVASDGGNIIFD 255
Query: 149 SF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
S+ + VK+ +QG+C+ CPSS TLKNG++ M++
Sbjct: 256 SYNEETKTVKVILQGACSGCPSSTATLKNGIEAMMR 291
>gi|429753011|ref|ZP_19285840.1| NifU-like protein [Capnocytophaga sp. oral taxon 326 str. F0382]
gi|429175308|gb|EKY16756.1| NifU-like protein [Capnocytophaga sp. oral taxon 326 str. F0382]
Length = 276
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 78/138 (56%), Gaps = 10/138 (7%)
Query: 54 LLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQ----- 108
LL R ++ VFF ++I++TK+ + +W+++ ++ I + S G P++ A+
Sbjct: 126 LLTRFPFIEEVFFDDNYISLTKKGME-EWEMIAADLRDYIRKYLSEGRPIINPAEIKRRQ 184
Query: 109 --PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV--VKLKMQGSCT 164
+ + DE Q I +++ ++P V DGG+IQFIS+ V++ +QG+C+
Sbjct: 185 EEAQARLLSMVTTDEISQQIVAVIEQYVKPAVASDGGNIQFISYNRDTHHVEVLLQGACS 244
Query: 165 SCPSSVVTLKNGVQNMLQ 182
CPSS TLK G++ +L+
Sbjct: 245 GCPSSTQTLKKGIEVILK 262
Score = 39.7 bits (91), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ +F A +PL K LF + VK+V+ +FI + K+ V+WK ++ E+ ++ +
Sbjct: 5 SYEFKNVDEAKNAPLAKELFYLPFVKTVYISSNFIAL-KRFPIVEWKEVQEEVAQQVLVY 63
Query: 97 FSSGLPVLT--DAQPSSDTV-IHEDDDETVQMIKELLDTRIRPTVQE 140
SG +L +P + + ++ + ++K + + R+ PTV E
Sbjct: 64 LQSGKDILLGEAGKPMGEAITVYTETTPNPTVMKFVANKRLVPTVIE 110
>gi|443243509|ref|YP_007376734.1| NifU-like domain protein [Nonlabens dokdonensis DSW-6]
gi|442800908|gb|AGC76713.1| NifU-like domain protein [Nonlabens dokdonensis DSW-6]
Length = 303
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 78/148 (52%), Gaps = 13/148 (8%)
Query: 51 LGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPS 110
L + L+ +K ++ ++I++ K D V W + E+ + I + SG + S
Sbjct: 146 LPRALYSFPFIKEIYVDENYISIQKHDV-VSWDEVTHEVRSFIRESLESGKSIGETKHES 204
Query: 111 SDTVIH----------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKLK 158
+ V E+ D+ + I E+LD I+P V DGG+I F ++ G V++
Sbjct: 205 AAIVKEKGETVDLPKFENLDDVSKKIVEILDEYIKPAVASDGGNIVFEGYEESNGEVRVI 264
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
+QG+C+ CPSS +TL+NG++ ML+ IP
Sbjct: 265 LQGACSGCPSSTMTLRNGIETMLKDMIP 292
Score = 38.9 bits (89), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 24 ISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWK 83
I F+ + +F A SPL + LF + VK+V+ +FI + + D V W
Sbjct: 17 IKFESNHFLVKNHSYEFKNIDEAKPSPLAQQLFYLPFVKTVYIAQNFIAIERY-DIVAWD 75
Query: 84 LLKPEIFATIMDFFSSG 100
+K E+ I ++ +SG
Sbjct: 76 DVKSEVADQISEYLNSG 92
>gi|384097777|ref|ZP_09998897.1| NifU-like protein 4 [Imtechella halotolerans K1]
gi|383836659|gb|EID76066.1| NifU-like protein 4 [Imtechella halotolerans K1]
Length = 298
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 9/142 (6%)
Query: 49 SPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL-TDA 107
+PL LF VK VF ++I++TK D DW + E+ I ++ + G ++ +A
Sbjct: 143 APLATALFHFPFVKEVFMDENYISITKYDM-ADWNEVSMELREFIRNYITDGKEIIDENA 201
Query: 108 QPSSDTVIHEDD-----DETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQ 160
+S+ I D D T + I +++ I+P V DGG+I F S+ +VK+ +Q
Sbjct: 202 MLTSNKNIITDTAFEALDTTSKEIINIIEEYIKPAVASDGGNILFESYDENSNMVKVILQ 261
Query: 161 GSCTSCPSSVVTLKNGVQNMLQ 182
G+C+ CPSS TLKNG++ ML+
Sbjct: 262 GACSGCPSSTFTLKNGIETMLK 283
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS 98
+F A SPL + LF + VK+V+ +FI + + V+W ++ E+ I D+ +
Sbjct: 31 EFKNIDEAKNSPLAQQLFYLPFVKTVYISGNFIAIERYSI-VEWMDVQNEVAEQIEDYLN 89
Query: 99 SGLPVLTD--AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQE 140
SG PV+ D ++ I+ ++ ++K + + ++ + E
Sbjct: 90 SGNPVVLDDESKKKVPVTIYAENTPNPSVMKYVANKKLVAAIHE 133
>gi|386321128|ref|YP_006017290.1| thioredoxin-like protein [Riemerella anatipestifer RA-GD]
gi|416109475|ref|ZP_11591434.1| nifU related protein [Riemerella anatipestifer RA-YM]
gi|442313842|ref|YP_007355145.1| Thioredoxin-like protein and domains [Riemerella anatipestifer
RA-CH-2]
gi|315023968|gb|EFT36970.1| nifU related protein [Riemerella anatipestifer RA-YM]
gi|325335671|gb|ADZ11945.1| Thioredoxin-like protein [Riemerella anatipestifer RA-GD]
gi|441482765|gb|AGC39451.1| Thioredoxin-like protein and domains [Riemerella anatipestifer
RA-CH-2]
Length = 292
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 10/158 (6%)
Query: 38 IDFPTGQAAYCSPLGKLLFR-IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
++ + + A PL + +F+ + VF +F+ VTK DD V W + A I ++
Sbjct: 127 VEVKSREEAAEVPLAQAIFKEFSFAQEVFISDNFVAVTK-DDSVQWHEVMVVTRAFIAEY 185
Query: 97 FSSGLPVLTDAQPSS-----DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
+G V + +P + +I+ + T Q I ++L+ + P V+ DGG I + +
Sbjct: 186 LQNGGEV-SQKEPQKHENPVEKIINREYTYTEQKISDVLNEYVAPAVENDGGKISLMEYD 244
Query: 151 -QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
K+ +QG+C+ CPSS TLK G++N+L+ ++P+
Sbjct: 245 ESTKTAKMLLQGACSGCPSSTATLKGGIENVLKQFLPD 282
>gi|329904748|ref|ZP_08273923.1| nitrogen-fixing NifU-like protein [Oxalobacteraceae bacterium
IMCC9480]
gi|327547851|gb|EGF32611.1| nitrogen-fixing NifU-like protein [Oxalobacteraceae bacterium
IMCC9480]
Length = 186
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 31 LEEP-----GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLL 85
L EP D P A PL LF ++ V +VF+ ++TVT QD + DW L
Sbjct: 20 LHEPLSWGVAHAYDNPAQAAG--DPLATALFALDHVTNVFYTDRWLTVT-QDGEADWPAL 76
Query: 86 KPEIFATIMDFFSSGLPVLTDAQPSSDTVIH---EDDDETVQMIKELLDTRIRPTVQEDG 142
+ A + + + ++ +H ED+ + I +LLD +IRP +Q DG
Sbjct: 77 V-RLIAVPLRAAPAAAAQSAELVSAARLAVHTMSEDEQDRFARITDLLDLQIRPALQADG 135
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GD+ + G + + QG+C +CPSS+ ++N+L+ P+
Sbjct: 136 GDLHVLGLSGDTLSIHYQGACGTCPSSIGGTLASIENLLRSIEPD 180
>gi|71029204|ref|XP_764245.1| hypothetical protein [Theileria parva strain Muguga]
gi|68351199|gb|EAN31962.1| hypothetical protein TP04_0610 [Theileria parva]
Length = 180
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 66/111 (59%), Gaps = 6/111 (5%)
Query: 88 EIFATIMDFFSSGLPVLTDAQ-PSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQ 146
I + M+F + +T A P S + ++D ETV+ IK L+D RIRP +Q+DGGD+
Sbjct: 59 RIMRSPMNFINRKFSTVTKAVIPESYS---DEDIETVESIKILIDKRIRPVIQQDGGDVS 115
Query: 147 FISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETTPGLNME 195
F+S+ G V +++ G+C C S VTLK+ +Q ML Y+ E T N++
Sbjct: 116 FVSYDPSTGYVYVRLSGACVGCIQSDVTLKHMIQGMLCHYLEEITAVYNVD 166
Score = 40.4 bits (93), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 21/25 (84%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
IK L+D RIRP +Q+DGGD+ F+S+
Sbjct: 95 IKILIDKRIRPVIQQDGGDVSFVSY 119
>gi|8571395|gb|AAF76865.1|AF232919_4 NifU-like protein [Sinorhizobium meliloti]
Length = 63
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 43/56 (76%)
Query: 132 TRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
TR+RP V +DGGDI F F+ G V L M+G+C+ CPSS TL++GVQN+L+ ++PE
Sbjct: 1 TRVRPAVAQDGGDITFRGFKDGTVFLNMKGACSGCPSSTATLRHGVQNLLRHFVPE 56
>gi|114331232|ref|YP_747454.1| NifU domain-containing protein [Nitrosomonas eutropha C91]
gi|114308246|gb|ABI59489.1| nitrogen-fixing NifU domain protein [Nitrosomonas eutropha C91]
Length = 186
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 89/163 (54%), Gaps = 6/163 (3%)
Query: 30 VLEEP---GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
+L+EP G T + + A PL LF I+ V +VF+ +IT+T QD DW+ L
Sbjct: 19 ILKEPLTWGVTKSYNNAEQAADDPLAAALFDIDHVINVFYVDRWITIT-QDGGADWQDLA 77
Query: 87 PEIFATIMDFFSSGLPVLTDAQPSSDTV--IHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
E+ I ++ T +S+ + + E+D + ++ I LL+ +RP +Q DGGD
Sbjct: 78 REVADPIRAAPAATDQSATVVAAASEALANLSEEDQQRLERINILLEEEVRPYLQHDGGD 137
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+ ++ +G ++++ QG+C +CPSS+ G++ +L+ P+
Sbjct: 138 LHVLALEGSLLRIHYQGACGTCPSSISGTLRGIEQLLRTIEPD 180
>gi|255534458|ref|YP_003094829.1| nifU related protein [Flavobacteriaceae bacterium 3519-10]
gi|255340654|gb|ACU06767.1| nifU related protein [Flavobacteriaceae bacterium 3519-10]
Length = 292
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 50 PLGKLLFRIEG-VKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGL------- 101
PL K +F G K +F +F+ VTK + V+W E+ T+ DF ++ L
Sbjct: 139 PLAKAIFDEFGFAKEIFISGNFVAVTK-NVSVEWH----EVMITMRDFIANYLQNGGAIS 193
Query: 102 PVLTDAQPSS-DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLK 158
+ T + ++ I D Q I ++LD + P V DGG I I + K+
Sbjct: 194 NIATQKHETPVESSIQRDYTANEQKISDILDEYVAPAVAGDGGKISLIEYDEASKTAKML 253
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+QG+C+ CPSS TLK G++N+L+ ++PE
Sbjct: 254 LQGACSGCPSSTATLKGGIENILKQFVPE 282
>gi|385811673|ref|YP_005848069.1| thioredoxin-like protein [Ignavibacterium album JCM 16511]
gi|383803721|gb|AFH50801.1| Thioredoxin-like protein [Ignavibacterium album JCM 16511]
Length = 180
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 6/143 (4%)
Query: 40 FPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSS 99
+ + + A P K +F I GV SVF+ F+T+ K + W ++ + DF +
Sbjct: 32 YSSREEAENDPFAKGIFDIPGVVSVFYMDKFVTIEKSKE-TSWGQIQRPFINFLKDFDKN 90
Query: 100 GLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKM 159
+P + + S ++ +E ++ I +LLD ++RP + DGG ++ I G VK++
Sbjct: 91 LIPAEKEIEIS-----EQESNELLKKINDLLDQKVRPALAGDGGGLEVIGLDGFTVKIRY 145
Query: 160 QGSCTSCPSSVVTLKNGVQNMLQ 182
QG+C SCPSS+ ++ +L+
Sbjct: 146 QGACGSCPSSISGTLMAIEGLLK 168
>gi|374287997|ref|YP_005035082.1| putative nitrogen fixation-related protein [Bacteriovorax marinus
SJ]
gi|301166538|emb|CBW26114.1| putative nitrogen fixation-related protein [Bacteriovorax marinus
SJ]
Length = 184
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 95/186 (51%), Gaps = 26/186 (13%)
Query: 6 LDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSP-------LGKLLFRI 58
+D +I+PT + ++FI L++P + G ++Y SP L LF +
Sbjct: 1 MDIQIQPTPNPNA--LKFI------LDKPVKN----EGNSSYKSPMDCGDNNLALTLFTV 48
Query: 59 EGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDA--QPSSDTVIH 116
GV + F + IT+TK + DW+ ++P TIMD+ +S P P +
Sbjct: 49 RGVDQLHFYDNVITITKFGYE-DWESMEP----TIMDYINSEYPKHDPNYFDPDPEAERR 103
Query: 117 EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNG 176
+ ++ I+ +LD IRP +Q DGGDIQ ISF+ ++ ++ QG+C +CPSS
Sbjct: 104 ANLSPELKEIEAILDKTIRPGLQGDGGDIQTISFEDNILLVQYQGACGTCPSSTTGTLEA 163
Query: 177 VQNMLQ 182
++ +L+
Sbjct: 164 IKAILR 169
Score = 40.0 bits (92), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVL 31
I+ +LD IRP +Q DGGDIQ ISF+D +L
Sbjct: 113 IEAILDKTIRPGLQGDGGDIQTISFEDNIL 142
>gi|238604262|ref|XP_002396156.1| hypothetical protein MPER_03666 [Moniliophthora perniciosa FA553]
gi|215468178|gb|EEB97086.1| hypothetical protein MPER_03666 [Moniliophthora perniciosa FA553]
Length = 115
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 46/61 (75%), Gaps = 3/61 (4%)
Query: 130 LDTRIRPTVQEDGGDIQFISFQ---GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
++TR+RP +QEDGGDI++ F G+VK+K++GSC C SS VTLK+G++ ML YIP
Sbjct: 22 VETRVRPAIQEDGGDIEYRGFDEDGSGLVKIKLKGSCRGCDSSTVTLKSGIERMLMHYIP 81
Query: 187 E 187
E
Sbjct: 82 E 82
>gi|294897644|ref|XP_002776034.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
gi|239882510|gb|EER07850.1| HIRA-interacting protein, putative [Perkinsus marinus ATCC 50983]
Length = 154
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 83/141 (58%), Gaps = 5/141 (3%)
Query: 58 IEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFS-SGLPVLTDAQPSSDTVIH 116
IEGV+ V H + V+K +DW +KP++ + + +FF+ GL + +T +
Sbjct: 1 IEGVERVVLTHHNVAVSKVSS-IDWCFVKPKVESVLSNFFAVPGLQSVYRYALQFETEVE 59
Query: 117 EDDD-ETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTL 173
E + + ++ I E+LD RIRP +Q+DGGD+ F + GV+ ++++G+C CP S VTL
Sbjct: 60 EAEKAKLMERIAEVLDDRIRPVLQDDGGDVDVADFDEETGVLSVRLKGACAGCPMSSVTL 119
Query: 174 KNGVQNMLQFYIPETTPGLNM 194
+ ++NML +PE +N+
Sbjct: 120 RFRIENMLVQSVPEVKKVINI 140
>gi|218659803|ref|ZP_03515733.1| Scaffold protein Nfu/NifU [Rhizobium etli IE4771]
Length = 107
Score = 75.5 bits (184), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + + A SPL LF I GV V+FG+DFI+V+K DDV+W+ LKP I +IM+
Sbjct: 35 TAEFRSAEEAQASPLAARLFEIPGVTGVYFGYDFISVSK--DDVEWQHLKPAILGSIMEH 92
Query: 97 FSSGLPVLTDA 107
F SG PV+ DA
Sbjct: 93 FMSGKPVMGDA 103
>gi|399218588|emb|CCF75475.1| unnamed protein product [Babesia microti strain RI]
Length = 126
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 121 ETVQMIKELLDTRIRPTVQEDGGDIQFISFQG--GVVKLKMQGSCTSCPSSVVTLKNGVQ 178
E V IK L+D RI+P VQ+DGGD++FI++ G V +++ G+C C S +TLK +Q
Sbjct: 36 ELVHSIKVLIDKRIKPVVQQDGGDVEFIAYYHDTGEVFIRLSGACVGCSQSDITLKRMIQ 95
Query: 179 NMLQFYIPETTPGLN 193
ML YIPE T N
Sbjct: 96 GMLTHYIPEVTTVYN 110
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCS 49
IK L+D RI+P VQ+DGGD++FI++ + G+ +G CS
Sbjct: 41 IKVLIDKRIKPVVQQDGGDVEFIAY----YHDTGEVFIRLSGACVGCS 84
>gi|254439456|ref|ZP_05052950.1| NifU-like domain protein [Octadecabacter antarcticus 307]
gi|198254902|gb|EDY79216.1| NifU-like domain protein [Octadecabacter antarcticus 307]
Length = 414
Score = 73.2 bits (178), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 15/183 (8%)
Query: 8 TRIRPTVQEDGGDIQFISFQDGVLEEPGQ-TIDFPTGQAAYCSPLGKLLFRIEGVKSVFF 66
TR R VQ D Q + F +L+ P Q + A+ +PL + LF I GV+ V
Sbjct: 6 TRRRIRVQPAVKDPQTLRF---ILDAPVQDSTSVCYDDASADAPLARALFAISGVQRVEV 62
Query: 67 GHDFITVTKQDDDVDWKLLKPEIFATIMDFFSS-GLPV--LTDAQPSSDTVIHEDDDETV 123
I V++ D VDW LK I A I D LP+ ++A D ++
Sbjct: 63 DGASIYVSRSAD-VDWSALKAPIAAAIRDVLEREALPLGQRSEAPKGEDALLF------- 114
Query: 124 QMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQF 183
+ +LLD+ P + GG + + V L+M G C C +S TL+ G++ ML+
Sbjct: 115 LAVADLLDSEANPAIASHGGSVAVERVENSDVYLRMSGGCQGCAASSATLRQGIETMLRA 174
Query: 184 YIP 186
+P
Sbjct: 175 GLP 177
>gi|296005287|ref|XP_002808974.1| NifU-like protein, putative [Plasmodium falciparum 3D7]
gi|225631861|emb|CAX64255.1| NifU-like protein, putative [Plasmodium falciparum 3D7]
Length = 192
Score = 72.8 bits (177), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 2/89 (2%)
Query: 101 LPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLK 158
+PVL + +ED E + IK L++ R+RP + DGGDI+FI F G+V ++
Sbjct: 90 IPVLEKIKNEKIYKDNEDIMEIISSIKLLIEKRVRPIILNDGGDIKFICFDVDKGIVYVQ 149
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++G+C +C S VTL+ ++NML +YI E
Sbjct: 150 LEGACVTCAQSEVTLQYMIKNMLTYYISE 178
>gi|373488388|ref|ZP_09579053.1| Scaffold protein Nfu/NifU [Holophaga foetida DSM 6591]
gi|372006713|gb|EHP07345.1| Scaffold protein Nfu/NifU [Holophaga foetida DSM 6591]
Length = 178
Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 8/138 (5%)
Query: 45 AAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVL 104
+A PL +F + SVF+ F+TV K D DW L I + DF +
Sbjct: 37 SAVGDPLASGIFAQGKITSVFYMDRFVTVNKHPD-ADWSDLIDPICERVEDFQAE--EGE 93
Query: 105 TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCT 164
A S+ +V DE + I+ ++D RIRP + DGG ++ +SF G V++++ QG+C
Sbjct: 94 AHAPASTGSV-----DEKLARIEAVIDQRIRPGLAGDGGGLEILSFDGTVLEIQYQGACG 148
Query: 165 SCPSSVVTLKNGVQNMLQ 182
SCPS+ N ++ +LQ
Sbjct: 149 SCPSAAGGTLNFIEGILQ 166
>gi|430747885|ref|YP_007207014.1| thioredoxin-like protein [Singulisphaera acidiphila DSM 18658]
gi|430019605|gb|AGA31319.1| thioredoxin-like protein [Singulisphaera acidiphila DSM 18658]
Length = 228
Score = 72.4 bits (176), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 31/173 (17%)
Query: 39 DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDD------------------- 79
D P+ Q SPL + LF +EGV ++ HD + VT+
Sbjct: 34 DRPSAQG---SPLAEALFAVEGVSALLIAHDLLVVTRSGAPGLPLVGPYVRLVRRAFGDT 90
Query: 80 -----VDWKLLKPEIFATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRI 134
VDWK L + + SG L+ A V ++ Q ++++L+ ++
Sbjct: 91 SARAPVDWKTLGKGVAKVLRAHLESGQVALSPAL----IVSMPTTEQLRQRVRDVLEEQV 146
Query: 135 RPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
P V GG ++ + VV L+M G C C + VTL++GV+ +++ +PE
Sbjct: 147 NPVVAGHGGGVELVDLIENVVYLRMSGGCQGCGLADVTLRHGVEAVIREAVPE 199
>gi|84997065|ref|XP_953254.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65304250|emb|CAI76629.1| hypothetical protein, conserved [Theileria annulata]
Length = 179
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Query: 121 ETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQ 178
ETV+ IK L+D RIRP +Q+DGGD+ F+S+ G V +++ G+C C S +TLK+ +Q
Sbjct: 90 ETVESIKLLIDKRIRPVIQQDGGDVFFVSYDPSTGYVYVRLSGACVGCIQSDITLKHMIQ 149
Query: 179 NMLQFYIPETTPGLNME 195
ML Y+ E T N++
Sbjct: 150 GMLCHYLEEITAVYNVD 166
Score = 39.7 bits (91), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 21/25 (84%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
IK L+D RIRP +Q+DGGD+ F+S+
Sbjct: 95 IKLLIDKRIRPVIQQDGGDVFFVSY 119
>gi|451981126|ref|ZP_21929503.1| putative Scaffold protein Nfu/NifU [Nitrospina gracilis 3/211]
gi|451761729|emb|CCQ90752.1| putative Scaffold protein Nfu/NifU [Nitrospina gracilis 3/211]
Length = 204
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 18/160 (11%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATI--- 93
T F + +A L + LF I GV++VF +F+T+TK V W L + T+
Sbjct: 32 TRTFSSPDSARGDALAEALFNIYGVENVFIKENFVTITKSPV-VGWTTLMEPVQNTLEKN 90
Query: 94 MDFFSSGLPVLTDAQPSS------DTVIHED-----DDETVQMIKELLDTRIRPTVQEDG 142
M F+ + D +P S + V ED D + ++I LLD IRP + DG
Sbjct: 91 MTFYETSD---EDQKPESAAKNILEEVEVEDFPNLPDKKKKEVIDALLDHAIRPALANDG 147
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
G I + +G VV + QG+C SCPSS ++N LQ
Sbjct: 148 GGITLLDVKGKVVHVHYQGACGSCPSSTTGTLQYIENFLQ 187
>gi|70940575|ref|XP_740685.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56518569|emb|CAH83895.1| hypothetical protein PC401665.00.0 [Plasmodium chabaudi chabaudi]
Length = 191
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 101 LPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ--GGVVKLK 158
LP+L + +E+ E + IK L++ R+RP V DGGDI+F+ F G+V ++
Sbjct: 89 LPILQKIKNEPKYNENEEIMEIISSIKLLIEKRVRPIVVNDGGDIKFVCFDMDSGIVYVQ 148
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+QG+C C S VTL+ ++NML +YI E
Sbjct: 149 LQGACVGCSQSEVTLQYMIKNMLTYYISE 177
>gi|386813085|ref|ZP_10100310.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386405355|dbj|GAB63191.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 72
Score = 72.0 bits (175), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 124 QMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQF 183
+ ++E L+ IRP +Q DGGDI+ + +GGVVK++++G+C +CPS+++TLK GV+ L+
Sbjct: 3 EKVEEALN-HIRPALQADGGDIELVDIEGGVVKVRLRGACGTCPSALMTLKYGVEERLKE 61
Query: 184 YIPET 188
IPE
Sbjct: 62 EIPEV 66
>gi|451979691|ref|ZP_21928104.1| putative nitrogen-fixing protein NifU [Nitrospina gracilis 3/211]
gi|451763060|emb|CCQ89301.1| putative nitrogen-fixing protein NifU [Nitrospina gracilis 3/211]
Length = 218
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 73/143 (51%), Gaps = 16/143 (11%)
Query: 40 FPTGQAAYCSP-------LGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFAT 92
TG +Y +P LG+ LF+ VK+V+ +F+TVTKQD W LK +++
Sbjct: 56 LETGNKSYSTPQDCGDDKLGQALFKNSAVKNVYIMKNFVTVTKQDT-AGWNPLKTQVWNI 114
Query: 93 I---MDFFSSGLPVLTDAQPSSD--TVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQF 147
I +D + S T SD ++ HE E ++M+ L+ IR + +DGG +
Sbjct: 115 IDELVDVYPSEEAGKTTHVDVSDFNSLPHEKKLEAIEMV---LNRSIRSQLAQDGGGVDL 171
Query: 148 ISFQGGVVKLKMQGSCTSCPSSV 170
+G V + QG+C +CPSS+
Sbjct: 172 QGLEGKEVLIHYQGACENCPSSM 194
>gi|221054900|ref|XP_002258589.1| NifU-like protein [Plasmodium knowlesi strain H]
gi|193808658|emb|CAQ39361.1| NifU-like protein, putative [Plasmodium knowlesi strain H]
Length = 191
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDD---ETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
D SSG +L+ Q + +E ++ E + IK L++ R+RP + DGGDI+FI F
Sbjct: 80 DSSSSGENILSILQKIKNEKKYEQNEDLMEIISSIKLLIEKRVRPVIVNDGGDIKFICFD 139
Query: 151 -QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V ++++G+C +C S +TL+ ++NML +YI E
Sbjct: 140 VDDGIVYVQLEGACVTCSQSEITLQYMIKNMLTYYISE 177
Score = 37.4 bits (85), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF--QDGVL 31
IK L++ R+RP + DGGDI+FI F DG++
Sbjct: 114 IKLLIEKRVRPVIVNDGGDIKFICFDVDDGIV 145
>gi|156081764|ref|XP_001608375.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148800946|gb|EDL42351.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 191
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDD---ETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
D SSG +L+ Q + +E ++ E + IK L++ R+RP + DGGDI+FI F
Sbjct: 80 DSSSSGENILSILQKIKNEKKYEQNEDLMEIISSIKLLIEKRVRPVIVNDGGDIKFICFD 139
Query: 151 -QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V ++++G+C +C S +TL+ ++NML +YI E
Sbjct: 140 IDDGIVYVQLEGACVTCSQSEITLQYMIKNMLTYYISE 177
Score = 37.4 bits (85), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF--QDGVL 31
IK L++ R+RP + DGGDI+FI F DG++
Sbjct: 114 IKLLIEKRVRPVIVNDGGDIKFICFDIDDGIV 145
>gi|373488164|ref|ZP_09578829.1| Scaffold protein Nfu/NifU [Holophaga foetida DSM 6591]
gi|372006489|gb|EHP07121.1| Scaffold protein Nfu/NifU [Holophaga foetida DSM 6591]
Length = 182
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 30 VLEEP---GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
+L+EP G +P + A PL K LF + V SVF +TVTK D+++ W L
Sbjct: 19 ILKEPVAVGFPRSYPNREIAEADPLAKALFEVGHVVSVFMQDKILTVTK-DEELTWNDLL 77
Query: 87 PEIFATIMDFFSSG--LPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGD 144
P++ I S+ P + P+ D ++D +Q I ++L+ I P + DGG
Sbjct: 78 PKLAPPIRSAPSAAQEAPTPREGSPTVD-----ENDPFIQQIYKVLEDTIMPALAADGGG 132
Query: 145 IQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
++ + + ++ QG+C +CPS + ++ +L+
Sbjct: 133 LEIVGRHDKQIMIRYQGACMTCPSGLTGTLMAIEGILK 170
>gi|91200475|emb|CAJ73523.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 72
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 42/54 (77%)
Query: 134 IRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
IRP +Q DGGDI+ + ++ G+VK++++G+C SCPSS+ TLK GV+ L+ IPE
Sbjct: 12 IRPALQADGGDIELVDYEDGIVKVRLKGACGSCPSSLATLKYGVEARLKEIIPE 65
>gi|89889561|ref|ZP_01201072.1| thioredoxin containing NifU domain [Flavobacteria bacterium BBFL7]
gi|89517834|gb|EAS20490.1| thioredoxin containing NifU domain [Flavobacteria bacterium BBFL7]
Length = 214
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 14/148 (9%)
Query: 51 LGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPS 110
L + L+ VK ++ +++++ K D W + EI + I + +G + + ++
Sbjct: 58 LARQLYNFPFVKEIYADENYVSIQKHDI-ASWDEVTFEIRSFIKEAIENGAEIGS-SKHE 115
Query: 111 SDTVIHEDD----------DETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV--VKLK 158
+ TV E + D+ + + E+LD I+P V DGG+I F S+ VK+
Sbjct: 116 AGTVKKEGENIELPKFENLDDVSKKVVEILDEYIKPAVASDGGNIVFDSYDENTKEVKVI 175
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
+QG+C+ CPSS +TLK+G++ ML+ +P
Sbjct: 176 LQGACSGCPSSTMTLKSGIETMLRDMLP 203
>gi|365983214|ref|XP_003668440.1| hypothetical protein NDAI_0B01630 [Naumovozyma dairenensis CBS 421]
gi|343767207|emb|CCD23197.1| hypothetical protein NDAI_0B01630 [Naumovozyma dairenensis CBS 421]
Length = 267
Score = 70.1 bits (170), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 98/189 (51%), Gaps = 23/189 (12%)
Query: 21 IQFISFQDGVLEEPGQTI----DFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQ 76
++F+S + + PG + T C ++ G +S+ G DF++V K
Sbjct: 42 LKFLSVDGELFQTPGSKSIVIKNTDTTLINNCKLAERIFLECSGAESLMIGDDFVSVNK- 100
Query: 77 DDDVDWKLLKPEIFATIMDFFSSGLPVLTD-------------AQPSSDTVIHEDDDETV 123
D +DW L+P++ +++ SG V++D + +T E D+E
Sbjct: 101 DSMIDWNQLRPDVVRILLEHLKSGENVISDDFFTVKELSEKAGGGYNINTPKFEYDEEAE 160
Query: 124 QMIKELL---DTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQ 178
++ + + DTRIRP + EDGGD+ ++ + + G V L+++GSC+SC SS VTLK G++
Sbjct: 161 EISEIIDELIDTRIRPAILEDGGDVDYLGWDSKTGTVYLRLKGSCSSCSSSEVTLKYGIE 220
Query: 179 NMLQFYIPE 187
+ML Y+ E
Sbjct: 221 SMLMHYVDE 229
>gi|334339956|ref|YP_004544936.1| nitrogen-fixing NifU domain-containing protein [Desulfotomaculum
ruminis DSM 2154]
gi|334091310|gb|AEG59650.1| nitrogen-fixing NifU domain protein [Desulfotomaculum ruminis DSM
2154]
Length = 74
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 124 QMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
+ +KE+L+ ++RP +Q DGGD++F+ + GVVK+K++G+C SCP ++ TLKNGV+ L+
Sbjct: 3 EKVKEVLE-QVRPFLQRDGGDVEFVDMDENGVVKVKLKGACGSCPGALYTLKNGVERTLK 61
Query: 183 FYIPETT 189
+PE T
Sbjct: 62 QQVPEVT 68
>gi|389583146|dbj|GAB65882.1| hypothetical protein PCYB_073840 [Plasmodium cynomolgi strain B]
Length = 191
Score = 70.1 bits (170), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDD---ETVQMIKELLDTRIRPTVQEDGGDIQFISF- 150
D S+G +L+ Q + +E ++ E + IK L++ R+RP + DGGDI+FI F
Sbjct: 80 DSSSTGENILSILQKIKNEKKYEQNEDLMEIISSIKLLIEKRVRPVIVNDGGDIKFICFD 139
Query: 151 -QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+V ++++G+C +C S +TL+ ++NML +YI E
Sbjct: 140 IDDGIVYVQLEGACVTCSQSEITLQYMIKNMLTYYISE 177
Score = 37.4 bits (85), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF--QDGVL 31
IK L++ R+RP + DGGDI+FI F DG++
Sbjct: 114 IKLLIEKRVRPVIVNDGGDIKFICFDIDDGIV 145
>gi|403223811|dbj|BAM41941.1| uncharacterized protein TOT_040000322 [Theileria orientalis strain
Shintoku]
Length = 113
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 3/76 (3%)
Query: 117 EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG---GVVKLKMQGSCTSCPSSVVTL 173
E + E V+ IK L++ RIRP +Q+DGGD+ F+S+ G V +K+ G+C C S +TL
Sbjct: 19 EQETEVVESIKMLIEKRIRPVIQQDGGDVSFVSYDPSTVGYVYVKLSGACVGCVQSDITL 78
Query: 174 KNGVQNMLQFYIPETT 189
K+ +Q ML Y+ E T
Sbjct: 79 KHMIQGMLCHYLDEIT 94
Score = 39.7 bits (91), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 21/25 (84%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
IK L++ RIRP +Q+DGGD+ F+S+
Sbjct: 28 IKMLIEKRIRPVIQQDGGDVSFVSY 52
>gi|452991063|emb|CCQ97689.1| Nitrogen-fixing NifU domain protein [Clostridium ultunense Esp]
Length = 75
Score = 69.7 bits (169), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
Query: 121 ETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNM 180
E + ++E+LD ++RP +Q DGGD++ + + G+VKL++ G+C SCPSS +TLK G++
Sbjct: 2 EVREKVEEVLD-KLRPFIQSDGGDVELLDVEDGIVKLRLLGACGSCPSSTITLKAGIERA 60
Query: 181 LQFYIPETT 189
L +PE
Sbjct: 61 LMEKVPEVV 69
>gi|218438992|ref|YP_002377321.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
7424]
gi|218171720|gb|ACK70453.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7424]
Length = 81
Score = 69.7 bits (169), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
T + ++++LD +RP + DGG+++ + G +VKL++QG+C SCPSS +TLK G++ L
Sbjct: 9 TTENVEQVLD-ELRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLKMGIERRL 67
Query: 182 QFYIPE 187
+ YIPE
Sbjct: 68 REYIPE 73
>gi|427702706|ref|YP_007045928.1| thioredoxin-like protein [Cyanobium gracile PCC 6307]
gi|427345874|gb|AFY28587.1| thioredoxin-like protein [Cyanobium gracile PCC 6307]
Length = 95
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 107 AQPSSDTVIHEDDDE--TVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCT 164
A P S E D T++ ++ +LD +RP + DGG+++ + G VVK+++QG+C
Sbjct: 6 ASPESTAAAVESDPRALTIENVERVLD-ELRPYLMADGGNVEIVEIDGPVVKVRLQGACG 64
Query: 165 SCPSSVVTLKNGVQNMLQFYIPETT 189
SCPSS +TLK G++ L+ IPE +
Sbjct: 65 SCPSSTMTLKMGIERKLREAIPEVS 89
>gi|429329539|gb|AFZ81298.1| ankyrin repeat domain-containing protein [Babesia equi]
Length = 152
Score = 69.3 bits (168), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 121 ETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLKNGVQ 178
E V IK L++ RIRP VQ+DGGD+ F+SF G V +++ G+C C S TLK+ +Q
Sbjct: 63 EVVDSIKMLIEKRIRPVVQQDGGDVDFVSFDPATGFVYVRLSGACVGCIQSDTTLKHMIQ 122
Query: 179 NMLQFYIPETTPGLN 193
ML YI E T N
Sbjct: 123 GMLCHYIDEITAVYN 137
Score = 40.4 bits (93), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
IK L++ RIRP VQ+DGGD+ F+SF
Sbjct: 68 IKMLIEKRIRPVVQQDGGDVDFVSF 92
>gi|254455102|ref|ZP_05068538.1| NifU-like domain protein [Octadecabacter arcticus 238]
gi|198263804|gb|EDY88075.1| NifU-like domain protein [Octadecabacter arcticus 238]
Length = 419
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 83/180 (46%), Gaps = 15/180 (8%)
Query: 9 RIRPTVQEDGGDIQFISFQDGVLEEPGQ-TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFG 67
R++PTV+ D Q + F +LE P Q + A+ +PL + LF I GV+ V
Sbjct: 11 RVQPTVK----DPQTLRF---ILEAPVQDSTSVCYDDASADAPLARALFAISGVQRVEVD 63
Query: 68 HDFITVTKQDDDVDWKLLKPEIFATIMDFF-SSGLPVLTDAQPSSDTVIHEDDDETVQMI 126
I V++ D VDW LK I I D S LP+ ++ +D + +
Sbjct: 64 GASIYVSRSTD-VDWSALKAPIAVAIRDVLDSEALPLGQRSE-----APKGEDALLLLAV 117
Query: 127 KELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
ELLD P + GG + + V L+M G C C +S TL+ G++ ML+ +P
Sbjct: 118 AELLDCEANPAIASHGGSVAVERVENSDVYLRMSGGCQGCAASSATLRQGIETMLRAGLP 177
>gi|434400564|ref|YP_007134568.1| nitrogen-fixing NifU domain-containing protein [Stanieria
cyanosphaera PCC 7437]
gi|428271661|gb|AFZ37602.1| nitrogen-fixing NifU domain-containing protein [Stanieria
cyanosphaera PCC 7437]
Length = 78
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
T Q ++E+LD +RP + DGG+++ + +G +VKL++QG+C SCPSS +TLK G++ L
Sbjct: 6 TEQNVEEVLD-EMRPYLMADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIERRL 64
Query: 182 QFYIPE 187
+ IPE
Sbjct: 65 REKIPE 70
>gi|89900651|ref|YP_523122.1| nitrogen-fixing NifU-like protein [Rhodoferax ferrireducens T118]
gi|89345388|gb|ABD69591.1| nitrogen-fixing NifU-like [Rhodoferax ferrireducens T118]
Length = 186
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 10/165 (6%)
Query: 30 VLEEP---GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLK 86
VL EP G + + A L LF I+ V +VF+ ++TVT QD +W L
Sbjct: 19 VLREPLTWGIAHSYENAEQAQGDALASALFAIDHVTNVFYIDRWLTVT-QDGQANWDALV 77
Query: 87 PEIF----ATIMDFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDG 142
EI A S V +D + D + + I+ +LD IRP +Q DG
Sbjct: 78 REIAVPLRAAPAASEQSAAAVFEARAHVAD--LSAQDRQRLDDIELILDQEIRPYLQSDG 135
Query: 143 GDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
GD+ + G + + QG+C +CPS++ G+++ L+ P+
Sbjct: 136 GDLHILGLAGNQLIVHYQGACGTCPSAISGTLQGIESRLRTLEPD 180
>gi|333373977|ref|ZP_08465871.1| NifU domain protein [Desmospora sp. 8437]
gi|332968729|gb|EGK07781.1| NifU domain protein [Desmospora sp. 8437]
Length = 73
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 124 QMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQF 183
+ ++E+LD ++RP +Q DGGD++ ++ + GVVK+++ G+C SCPSS +TLK G++ L
Sbjct: 3 EQVQEVLD-KLRPFIQRDGGDVELVNVEDGVVKVRLLGACGSCPSSTITLKAGIERALME 61
Query: 184 YIPETT 189
IP T
Sbjct: 62 EIPGVT 67
>gi|226314372|ref|YP_002774268.1| iron-sulfur cluster assembly protein [Brevibacillus brevis NBRC
100599]
gi|226097322|dbj|BAH45764.1| putative iron-sulfur cluster assembly protein [Brevibacillus brevis
NBRC 100599]
Length = 89
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 126 IKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYI 185
++E+LD ++RP +Q DGGD+Q + + G+VKL++ G+C SCPSS +TLK G++ L I
Sbjct: 21 VQEVLD-KLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEI 79
Query: 186 P 186
P
Sbjct: 80 P 80
>gi|398812977|ref|ZP_10571683.1| thioredoxin-like protein [Brevibacillus sp. BC25]
gi|398039967|gb|EJL33089.1| thioredoxin-like protein [Brevibacillus sp. BC25]
Length = 75
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 126 IKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYI 185
++E+LD ++RP +Q DGGD+Q + + G+VKL++ G+C SCPSS +TLK G++ L I
Sbjct: 7 VQEVLD-KLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEI 65
Query: 186 P 186
P
Sbjct: 66 P 66
>gi|399047236|ref|ZP_10739332.1| thioredoxin-like protein [Brevibacillus sp. CF112]
gi|398054843|gb|EJL46949.1| thioredoxin-like protein [Brevibacillus sp. CF112]
Length = 75
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 126 IKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYI 185
++E+LD ++RP +Q DGGD+Q + + G+VKL++ G+C SCPSS +TLK G++ L I
Sbjct: 7 VQEVLD-KLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEI 65
Query: 186 P 186
P
Sbjct: 66 P 66
>gi|433546960|ref|ZP_20503251.1| iron-sulfur cluster assembly protein [Brevibacillus agri BAB-2500]
gi|432181747|gb|ELK39357.1| iron-sulfur cluster assembly protein [Brevibacillus agri BAB-2500]
Length = 73
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 126 IKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYI 185
++E+LD ++RP +Q DGGD+Q + + G+VKL++ G+C SCPSS +TLK G++ L I
Sbjct: 5 VQEVLD-KLRPYLQRDGGDVQLVDVEDGIVKLRLMGACGSCPSSTITLKAGIERALVEEI 63
Query: 186 P 186
P
Sbjct: 64 P 64
>gi|412992744|emb|CCO18724.1| NifU-like protein [Bathycoccus prasinos]
Length = 227
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 98 SSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKL 157
SS P T A + I+E + T ++++LD +RP + DGG+++ + G VVKL
Sbjct: 54 SSSSPTTTRAAGEPASSINETLELTGDNVEKVLD-EVRPYLISDGGNVELVEIDGLVVKL 112
Query: 158 KMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
++QG+C SCPSS VT++ G++ L IPE
Sbjct: 113 RLQGACGSCPSSTVTMRMGIERRLMEKIPE 142
>gi|414155079|ref|ZP_11411395.1| Nitrogen-fixing NifU domain protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411453392|emb|CCO09299.1| Nitrogen-fixing NifU domain protein [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 74
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 50/66 (75%), Gaps = 2/66 (3%)
Query: 124 QMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
+ +KE+L+ ++RP +Q DGGD++F+ + GVVK+K++G+C SCP ++ TLKNG++ L+
Sbjct: 3 EKVKEVLE-QVRPFLQRDGGDVEFVDCDENGVVKVKLRGACGSCPGALYTLKNGIERALK 61
Query: 183 FYIPET 188
IPE
Sbjct: 62 QQIPEV 67
>gi|428774789|ref|YP_007166576.1| nitrogen-fixing NifU domain-containing protein [Halothece sp. PCC
7418]
gi|428689068|gb|AFZ42362.1| nitrogen-fixing NifU domain protein [Halothece sp. PCC 7418]
Length = 82
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
T + ++++LD +RP + DGG++ + +G +VKLK+QG+C SCPSS +TLK G++ L
Sbjct: 9 TPENVEKVLD-ELRPYLMADGGNVDLVEIEGPIVKLKLQGACGSCPSSAMTLKMGIERRL 67
Query: 182 QFYIPE 187
+ +IPE
Sbjct: 68 REFIPE 73
>gi|335039700|ref|ZP_08532851.1| nitrogen-fixing NifU domain-containing protein [Caldalkalibacillus
thermarum TA2.A1]
gi|334180403|gb|EGL83017.1| nitrogen-fixing NifU domain-containing protein [Caldalkalibacillus
thermarum TA2.A1]
Length = 75
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 126 IKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYI 185
++E+LD ++RP +Q DGGD + ++ + GVVKL++ G+C SCP+S +TLK G++ L I
Sbjct: 7 VQEVLD-KLRPFLQRDGGDCELVAVEDGVVKLRLLGACGSCPASTMTLKAGIERALMEEI 65
Query: 186 PE 187
PE
Sbjct: 66 PE 67
>gi|260892780|ref|YP_003238877.1| nitrogen-fixing NifU domain-containing protein [Ammonifex degensii
KC4]
gi|260864921|gb|ACX52027.1| nitrogen-fixing NifU domain protein [Ammonifex degensii KC4]
Length = 72
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 43/57 (75%)
Query: 132 TRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPET 188
+IRP +Q DGGD++ ++ + GVVK++++G+C CP ++VTLK G++ +L+ +PE
Sbjct: 10 AQIRPHLQRDGGDVELVAVEDGVVKVRLKGACGGCPMAMVTLKQGIERILKEAVPEV 66
>gi|310643822|ref|YP_003948580.1| protein NifU [Paenibacillus polymyxa SC2]
gi|309248772|gb|ADO58339.1| NifU-like protein [Paenibacillus polymyxa SC2]
gi|392304552|emb|CCI70915.1| Fe/S biogenesis protein nfuA [Paenibacillus polymyxa M1]
Length = 81
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Query: 121 ETVQMIKELLDT--RIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQ 178
++VQM E+ D ++RP +Q DGGD++ + + G+VKLK+ G+C SCPSS +TLK G++
Sbjct: 5 QSVQMYDEVADVLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKAGIE 64
Query: 179 NML 181
L
Sbjct: 65 RAL 67
>gi|428304593|ref|YP_007141418.1| nitrogen-fixing NifU domain-containing protein [Crinalium
epipsammum PCC 9333]
gi|428246128|gb|AFZ11908.1| nitrogen-fixing NifU domain-containing protein [Crinalium
epipsammum PCC 9333]
Length = 82
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
T + ++++LD +RP + DGG+++ + +G +VKL++QG+C SCPSS +TLK G++ L
Sbjct: 10 TTENVEKVLDD-LRPYLMSDGGNVELVEIEGPIVKLRLQGACGSCPSSAMTLKMGIERRL 68
Query: 182 QFYIPE 187
+IPE
Sbjct: 69 MEFIPE 74
>gi|375310171|ref|ZP_09775447.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
Aloe-11]
gi|375077764|gb|EHS55996.1| nitrogen-fixing NifU domain-containing protein [Paenibacillus sp.
Aloe-11]
Length = 81
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Query: 121 ETVQMIKELLDT--RIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQ 178
++VQM E+ D ++RP +Q DGGD++ + + G+VKLK+ G+C SCPSS +TLK G++
Sbjct: 5 QSVQMYDEVADVLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKAGIE 64
Query: 179 NML 181
L
Sbjct: 65 RAL 67
>gi|428781577|ref|YP_007173363.1| thioredoxin-like protein [Dactylococcopsis salina PCC 8305]
gi|428695856|gb|AFZ52006.1| thioredoxin-like protein [Dactylococcopsis salina PCC 8305]
Length = 82
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
T + ++++LD +RP + DGG++ + +G +VKLK+QG+C SCPSS +TLK G++ L
Sbjct: 9 TPENVEKVLDD-LRPYLMADGGNVDLVEIEGPIVKLKLQGACGSCPSSAMTLKMGIERRL 67
Query: 182 QFYIPE 187
+ +IPE
Sbjct: 68 REFIPE 73
>gi|218516514|ref|ZP_03513354.1| nitrogen fixation protein [Rhizobium etli 8C-3]
Length = 99
Score = 67.4 bits (163), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F + A SPL LF I GV V+FG+DFI+V+K D+ +W+ LKP I +IM
Sbjct: 27 TAEFRSAAEAEASPLAARLFEIPGVTGVYFGYDFISVSK--DNAEWQHLKPAILGSIMKH 84
Query: 97 FSSGLPVL 104
F SG PV+
Sbjct: 85 FMSGKPVM 92
>gi|308070638|ref|YP_003872243.1| thioredoxin-like protein [Paenibacillus polymyxa E681]
gi|374320176|ref|YP_005073305.1| thioredoxin-like protein [Paenibacillus terrae HPL-003]
gi|305859917|gb|ADM71705.1| Thioredoxin-like protein [Paenibacillus polymyxa E681]
gi|357199185|gb|AET57082.1| thioredoxin-like protein [Paenibacillus terrae HPL-003]
Length = 81
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Query: 121 ETVQMIKELLDT--RIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQ 178
++VQM E+ D ++RP +Q DGGD++ + + G+VKLK+ G+C SCPSS +TLK G++
Sbjct: 5 QSVQMYDEVADVLDKLRPFLQRDGGDVELVDVEDGIVKLKLVGACGSCPSSTITLKAGIE 64
Query: 179 NML 181
L
Sbjct: 65 RAL 67
>gi|156088839|ref|XP_001611826.1| NifU-like domain containing protein [Babesia bovis]
gi|154799080|gb|EDO08258.1| NifU-like domain containing protein [Babesia bovis]
Length = 123
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Query: 117 EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSCTSCPSSVVTLK 174
E D E V IK L+D RI P V++DGGD+ FIS+ + G V +++ G+C C S +TLK
Sbjct: 28 EADLEVVDSIKLLIDKRIAPVVRQDGGDVSFISYDPETGFVYVRLSGACVGCAQSDITLK 87
Query: 175 NGVQNMLQFYIPETTPGLNME 195
+ +Q L Y+ + T +N +
Sbjct: 88 HMIQGTLCHYLDDVTGVMNCD 108
Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/25 (60%), Positives = 20/25 (80%)
Query: 2 IKELLDTRIRPTVQEDGGDIQFISF 26
IK L+D RI P V++DGGD+ FIS+
Sbjct: 37 IKLLIDKRIAPVVRQDGGDVSFISY 61
>gi|307153189|ref|YP_003888573.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. PCC
7822]
gi|306983417|gb|ADN15298.1| nitrogen-fixing NifU domain protein [Cyanothece sp. PCC 7822]
Length = 78
Score = 67.0 bits (162), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 134 IRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+RP + DGG+++ + G +VKL++QG+C SCPSS +TLK G++ L+ YIPE
Sbjct: 17 MRPYLMADGGNVELVEIDGPIVKLRLQGACGSCPSSTMTLKMGIERRLREYIPE 70
>gi|414165358|ref|ZP_11421605.1| hypothetical protein HMPREF9697_03506 [Afipia felis ATCC 53690]
gi|410883138|gb|EKS30978.1| hypothetical protein HMPREF9697_03506 [Afipia felis ATCC 53690]
Length = 213
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 57/124 (45%), Gaps = 5/124 (4%)
Query: 16 EDGGDIQFISFQDGVLEEPGQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTK 75
E+ D + + F G P T++ T + A SPL + LF I GV V D I VT+
Sbjct: 6 EETQDSERLRFLPGREVLPEGTLNLKTKEQAASSPLAEQLFTIPGVAGVLLNKDSIVVTR 65
Query: 76 QDDDVDWKLLKPEIFATIMDFFSSGLPVLT---DAQPSSDTVIHEDDDETVQMIKELLDT 132
DW+ LKP I TIM+ F SG PVL A + EDD I+E L
Sbjct: 66 SGS--DWQHLKPAILGTIMEHFMSGAPVLRTPPGASAHASASGEEDDATAAGQIREALRR 123
Query: 133 RIRP 136
I P
Sbjct: 124 VIDP 127
>gi|149195565|ref|ZP_01872622.1| putative nitrogen-fixing protein NifU [Lentisphaera araneosa
HTCC2155]
gi|149141027|gb|EDM29423.1| putative nitrogen-fixing protein NifU [Lentisphaera araneosa
HTCC2155]
Length = 185
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 18/139 (12%)
Query: 51 LGKLLFRIEGVKSVFFGHDFITVTKQDDDVDW----KLLKPEIFATI--MDFFSSGLPVL 104
L + F +EGV S+F+ ++IT+TK +D DW +K EI + ++F + +P +
Sbjct: 42 LARACFAVEGVVSIFYRDNYITITK-NDSADWFEIEMTIKDEINNRVEAIEFKAQAVPEI 100
Query: 105 TDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGG-VVKLKMQGSC 163
+ T++ E DD +LD IRP + DGG + I V+ ++ QG+C
Sbjct: 101 NFGEKQ--TLVFEIDD--------ILDETIRPGLAMDGGGVDIIDLSDEMVLSVRYQGAC 150
Query: 164 TSCPSSVVTLKNGVQNMLQ 182
SCPSS ++N+LQ
Sbjct: 151 GSCPSSTTGTLMAIENILQ 169
>gi|428769088|ref|YP_007160878.1| nitrogen-fixing NifU domain-containing protein [Cyanobacterium
aponinum PCC 10605]
gi|428683367|gb|AFZ52834.1| nitrogen-fixing NifU domain-containing protein [Cyanobacterium
aponinum PCC 10605]
Length = 78
Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
T + ++++LD +RP + DGG+++ + G VKL++QG+C SCPSS +TL+ G++ L
Sbjct: 6 TPENVEQVLD-ELRPYLMADGGNVELVEIDGPTVKLRLQGACGSCPSSTMTLRMGIERRL 64
Query: 182 QFYIPE 187
+ YIPE
Sbjct: 65 REYIPE 70
>gi|333919642|ref|YP_004493223.1| Rieske family iron-sulfur cluster-binding protein [Amycolicicoccus
subflavus DQS3-9A1]
gi|333481863|gb|AEF40423.1| Rieske family iron-sulfur cluster-binding protein [Amycolicicoccus
subflavus DQS3-9A1]
Length = 302
Score = 66.6 bits (161), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 115 IHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLK 174
+H DD+ET ++ LD+ +RP + GGD+ I + GVV L+ QG+C SCPSS TL+
Sbjct: 83 LHPDDEET--RVRRALDS-VRPYLGSHGGDVDLIGIEDGVVHLRFQGTCKSCPSSTATLE 139
Query: 175 NGVQNMLQFYIPETT 189
V+ ++ PE T
Sbjct: 140 LAVEGAIKAAAPEVT 154
>gi|328953813|ref|YP_004371147.1| nitrogen-fixing NifU domain-containing protein [Desulfobacca
acetoxidans DSM 11109]
gi|328454137|gb|AEB09966.1| nitrogen-fixing NifU domain-containing protein [Desulfobacca
acetoxidans DSM 11109]
Length = 72
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 132 TRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIP 186
+IRP +Q DGGD++ + + GVVK+K+ G+C CP S +TLKNG++ +L+ +P
Sbjct: 10 AKIRPMLQRDGGDVELVEVEHGVVKVKLTGACKGCPMSQMTLKNGIERLLKQEVP 64
>gi|113476915|ref|YP_722976.1| nitrogen-fixing NifU-like protein [Trichodesmium erythraeum IMS101]
gi|110167963|gb|ABG52503.1| nitrogen-fixing NifU-like [Trichodesmium erythraeum IMS101]
Length = 80
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 44/60 (73%)
Query: 128 ELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
E++ +RP + DGG+++ + +G +VKL++QG+C+SCPSS +TLK G++ L+ IPE
Sbjct: 13 EIVLDELRPYLAADGGNVELVDIEGPIVKLRLQGACSSCPSSTMTLKMGIERKLREEIPE 72
>gi|427728580|ref|YP_007074817.1| thioredoxin-like protein [Nostoc sp. PCC 7524]
gi|427364499|gb|AFY47220.1| thioredoxin-like protein [Nostoc sp. PCC 7524]
Length = 76
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
TV+ ++++LD +RP + DGG+++ + G +VKL++QG+C SCPSS +TL+ G++ L
Sbjct: 4 TVENVEKVLD-EMRPYLMSDGGNVELVELDGPIVKLRLQGACGSCPSSTMTLRMGLERRL 62
Query: 182 QFYIPE 187
+ IPE
Sbjct: 63 REMIPE 68
>gi|229816700|ref|ZP_04446988.1| hypothetical protein COLINT_03748 [Collinsella intestinalis DSM
13280]
gi|229807752|gb|EEP43566.1| hypothetical protein COLINT_03748 [Collinsella intestinalis DSM
13280]
Length = 98
Score = 66.2 bits (160), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 52/71 (73%), Gaps = 4/71 (5%)
Query: 120 DETVQMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGSCTSCPSSVVTLKNGVQ 178
DET ++KE+L+ +IRP +Q DGGD+++I + GVVKL++QG+C CP S +TL GV+
Sbjct: 9 DET--LLKEVLE-QIRPNLQADGGDMEYIGVTEDGVVKLELQGACAGCPMSSLTLSMGVE 65
Query: 179 NMLQFYIPETT 189
+L+ ++P T
Sbjct: 66 RILKEHVPGVT 76
>gi|67921653|ref|ZP_00515171.1| Nitrogen-fixing NifU, C-terminal [Crocosphaera watsonii WH 8501]
gi|416385495|ref|ZP_11684792.1| nitrogen-fixing NifU domain protein [Crocosphaera watsonii WH 0003]
gi|67856765|gb|EAM52006.1| Nitrogen-fixing NifU, C-terminal [Crocosphaera watsonii WH 8501]
gi|357264875|gb|EHJ13707.1| nitrogen-fixing NifU domain protein [Crocosphaera watsonii WH 0003]
Length = 80
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 7/78 (8%)
Query: 110 SSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSS 169
S V++ D+ ETV LD +RP + DGG+++ + +G VVKL++QG+C SCPSS
Sbjct: 2 SETLVLNPDNVETV------LD-EMRPYLMADGGNVELVDIEGPVVKLRLQGACGSCPSS 54
Query: 170 VVTLKNGVQNMLQFYIPE 187
+TL+ G++ L+ IPE
Sbjct: 55 TMTLRMGIERRLREMIPE 72
>gi|238568059|ref|XP_002386363.1| hypothetical protein MPER_15421 [Moniliophthora perniciosa FA553]
gi|215438109|gb|EEB87293.1| hypothetical protein MPER_15421 [Moniliophthora perniciosa FA553]
Length = 105
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 46/64 (71%), Gaps = 1/64 (1%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
T +F ++A SPL L IEGVK+VF+G DF+T++K D + W ++KPE+++ +M+F
Sbjct: 27 TAEFLDTRSALASPLAIRLMGIEGVKAVFYGPDFVTISK-DSENPWAVIKPEVYSILMEF 85
Query: 97 FSSG 100
FSSG
Sbjct: 86 FSSG 89
>gi|172035933|ref|YP_001802434.1| NifU-like protein [Cyanothece sp. ATCC 51142]
gi|354556021|ref|ZP_08975319.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. ATCC
51472]
gi|171697387|gb|ACB50368.1| NifU-like protein [Cyanothece sp. ATCC 51142]
gi|353552020|gb|EHC21418.1| nitrogen-fixing NifU domain-containing protein [Cyanothece sp. ATCC
51472]
Length = 80
Score = 66.2 bits (160), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 126 IKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYI 185
++++LD +RP + DGG+++ + +G +VKL++QG+C SCPSS +TLK G++ L+ I
Sbjct: 12 VEQVLD-EMRPYLMADGGNVELVEIEGPIVKLRLQGACGSCPSSTMTLKMGIERRLREMI 70
Query: 186 PE 187
PE
Sbjct: 71 PE 72
>gi|427420653|ref|ZP_18910836.1| thioredoxin-like protein [Leptolyngbya sp. PCC 7375]
gi|425756530|gb|EKU97384.1| thioredoxin-like protein [Leptolyngbya sp. PCC 7375]
Length = 79
Score = 65.9 bits (159), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 126 IKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYI 185
++++LD +RP + DGG+++ + G VVKL++QG+C SCPSS +TL+ G++ L+ +I
Sbjct: 11 VEKVLD-ELRPYLMADGGNVELVDIDGPVVKLRLQGACGSCPSSAMTLRMGIERRLREFI 69
Query: 186 PE 187
PE
Sbjct: 70 PE 71
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.139 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,189,453,257
Number of Sequences: 23463169
Number of extensions: 132661228
Number of successful extensions: 298066
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2047
Number of HSP's successfully gapped in prelim test: 694
Number of HSP's that attempted gapping in prelim test: 291510
Number of HSP's gapped (non-prelim): 4886
length of query: 195
length of database: 8,064,228,071
effective HSP length: 135
effective length of query: 60
effective length of database: 9,191,667,552
effective search space: 551500053120
effective search space used: 551500053120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)