BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1153
(195 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B4H303|NFU1_DROPE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila persimilis GN=GL13432 PE=3 SV=1
Length = 282
Score = 249 bits (636), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 114/153 (74%), Positives = 137/153 (89%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+G AA+CSPL KLLFR+EGV++VFFG DFIT++K++ +W L+KPE+FA IM
Sbjct: 88 GNTYDFPSGTAAHCSPLAKLLFRVEGVRAVFFGSDFITISKEES-AEWSLIKPEVFAVIM 146
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP+L +A+P++DT I +DDDETV MIKELLDTRIRPTVQEDGGDI FIS++ GV
Sbjct: 147 DFFASGLPILHEARPNADTEILDDDDETVMMIKELLDTRIRPTVQEDGGDIVFISYENGV 206
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 207 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 239
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 31/32 (96%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI FIS+++GV++
Sbjct: 177 MIKELLDTRIRPTVQEDGGDIVFISYENGVVK 208
>sp|B4JWR9|NFU1_DROGR NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila grimshawi GN=GH17809 PE=3 SV=1
Length = 298
Score = 249 bits (636), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 114/153 (74%), Positives = 137/153 (89%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+ AA+CSPL KLLFR+EGV++VFFG DFIT++K+++ +W L+KPE+FA IM
Sbjct: 104 GNTYDFPSATAAHCSPLAKLLFRVEGVRAVFFGSDFITISKEENG-EWGLIKPEVFAVIM 162
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP+L +A+P++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI FIS++ GV
Sbjct: 163 DFFASGLPILHEARPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFISYEKGV 222
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 223 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 255
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI FIS++ GV++
Sbjct: 193 MIKELLDTRIRPTVQEDGGDIVFISYEKGVVK 224
>sp|B5DKJ8|NFU1_DROPS NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila pseudoobscura pseudoobscura GN=GA22888
PE=3 SV=1
Length = 286
Score = 249 bits (635), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 114/153 (74%), Positives = 137/153 (89%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+G AA+CSPL KLLFR+EGV++VFFG DFIT++K++ +W L+KPE+FA IM
Sbjct: 92 GNTYDFPSGTAAHCSPLAKLLFRVEGVRAVFFGSDFITISKEES-AEWSLIKPEVFAVIM 150
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP+L +A+P++DT I +DDDETV MIKELLDTRIRPTVQEDGGDI FIS++ GV
Sbjct: 151 DFFASGLPILHEARPNADTEILDDDDETVMMIKELLDTRIRPTVQEDGGDIVFISYENGV 210
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 211 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 243
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/32 (81%), Positives = 31/32 (96%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI FIS+++GV++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFISYENGVVK 212
>sp|B4M375|NFU1_DROVI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila virilis GN=GJ19011 PE=3 SV=1
Length = 298
Score = 247 bits (631), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 112/153 (73%), Positives = 136/153 (88%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+G AA+CSPL KLLFR+EGV++VFFG DFIT++K++ +W L+KPE+FA IM
Sbjct: 100 GNTYDFPSGSAAHCSPLAKLLFRVEGVRAVFFGGDFITISKEESG-EWGLIKPEVFAVIM 158
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPV+ +A+P++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ G+
Sbjct: 159 DFFASGLPVIHEARPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYENGI 218
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 219 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 251
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ +++G+++
Sbjct: 189 MIKELLDTRIRPTVQEDGGDIVFMGYENGIVK 220
>sp|Q8SY96|NFU1_DROME NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila melanogaster GN=CG32500 PE=2 SV=1
Length = 283
Score = 247 bits (630), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/153 (75%), Positives = 133/153 (86%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP G A+ SPL KLLFR+EGVK VFFG DF+T++KQ+ +W L+KPE+FA IM
Sbjct: 92 GNTYDFPNGTTAHNSPLAKLLFRVEGVKGVFFGADFVTISKQEG-AEWSLIKPEVFAVIM 150
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPVL DAQP++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++GGV
Sbjct: 151 DFFASGLPVLNDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEGGV 210
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 211 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 243
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFMGYEGGVVK 212
>sp|B4PZ52|NFU1_DROYA NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila yakuba GN=GE15286 PE=3 SV=1
Length = 283
Score = 246 bits (629), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 115/153 (75%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP G A+ SPL KLLFR+EGVK VFFG DF+T++KQ+ +W L+KPE+FA IM
Sbjct: 92 GNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGADFVTISKQEG-AEWSLIKPEVFAVIM 150
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPVL DAQP++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ GV
Sbjct: 151 DFFASGLPVLHDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGV 210
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 211 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 243
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFMGYEAGVVK 212
>sp|B4IMF6|NFU1_DROSE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila sechellia GN=GM13534 PE=3 SV=1
Length = 283
Score = 246 bits (629), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/153 (75%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP G A+ SPL KLLFR+EGVK VFFG DFIT++KQ+ +W L+KPE+FA IM
Sbjct: 92 GNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGADFITISKQEG-AEWSLIKPEVFAVIM 150
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPVL DAQP++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ GV
Sbjct: 151 DFFASGLPVLNDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGV 210
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 211 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 243
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFMGYEAGVVK 212
>sp|B4R3T1|NFU1_DROSI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila simulans GN=GD15490 PE=3 SV=1
Length = 283
Score = 246 bits (627), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 116/153 (75%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP G A+ SPL KLLFR+EGVK VFFG DFIT++KQ+ +W L+KPE+FA IM
Sbjct: 92 GNTYDFPHGTTAHSSPLAKLLFRVEGVKGVFFGADFITISKQEG-AEWSLIKPEVFAVIM 150
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPVL DAQP++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ GV
Sbjct: 151 DFFASGLPVLNDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGV 210
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 211 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 243
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFMGYEAGVVK 212
>sp|B3NYF7|NFU1_DROER NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila erecta GN=GG17526 PE=3 SV=1
Length = 283
Score = 246 bits (627), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 115/153 (75%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP G A+ SPL KLLFR+EGVK VFFG DF+T++KQ+ +W L+KPE+FA IM
Sbjct: 92 GNTYDFPNGTTAHSSPLAKLLFRVEGVKGVFFGADFVTISKQEG-AEWSLIKPEVFAVIM 150
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLPVL DAQP++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ GV
Sbjct: 151 DFFASGLPVLHDAQPNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYEAGV 210
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 211 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 243
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/32 (75%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ ++ GV++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFMGYEAGVVK 212
>sp|B4NE93|NFU1_DROWI NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila willistoni GN=GK25604 PE=3 SV=1
Length = 289
Score = 243 bits (621), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 113/153 (73%), Positives = 134/153 (87%), Gaps = 1/153 (0%)
Query: 35 GQTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIM 94
G T DFP+ AA+CSPL KLLFR+EGV+SVFFG DFIT++K++ +W L+KPE+FA IM
Sbjct: 93 GNTYDFPSVAAAHCSPLAKLLFRVEGVRSVFFGSDFITISKEEA-AEWGLIKPEVFAVIM 151
Query: 95 DFFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
DFF+SGLP+L +A+ ++DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+S+ GV
Sbjct: 152 DFFASGLPILHEARNNADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMSYDNGV 211
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
VKLKMQGSC+SCPSS+VTLKNGVQNMLQFYIPE
Sbjct: 212 VKLKMQGSCSSCPSSIVTLKNGVQNMLQFYIPE 244
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+S+ +GV++
Sbjct: 182 MIKELLDTRIRPTVQEDGGDIVFMSYDNGVVK 213
>sp|B3MRT7|NFU1_DROAN NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
OS=Drosophila ananassae GN=GF20932 PE=3 SV=1
Length = 286
Score = 239 bits (610), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 121/197 (61%), Positives = 147/197 (74%), Gaps = 14/197 (7%)
Query: 3 KELLDTRIRPTVQEDGGDIQFISFQDGVLEEP------------GQTIDFPTGQAAYCSP 50
K LL T+ R +Q G FI QD E G T DFP+G A+ SP
Sbjct: 49 KGLLQTQQR-QIQLSGARNMFIQTQDTPNPESLKFLPGVEVLGKGNTHDFPSGTTAHGSP 107
Query: 51 LGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLTDAQPS 110
L KLLFR+EGV++VFFG DFIT++K++ +W L+KPE+FA IMDFF+SGLP+L ++ P+
Sbjct: 108 LAKLLFRVEGVRAVFFGADFITISKEEG-AEWSLIKPEVFAVIMDFFASGLPILHESTPN 166
Query: 111 SDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSV 170
+DT I EDDDETV MIKELLDTRIRPTVQEDGGDI F+ ++ G+VKLKMQGSC+SCPSS+
Sbjct: 167 ADTEILEDDDETVMMIKELLDTRIRPTVQEDGGDIVFMGYENGIVKLKMQGSCSSCPSSI 226
Query: 171 VTLKNGVQNMLQFYIPE 187
VTLKNGVQNMLQFYIPE
Sbjct: 227 VTLKNGVQNMLQFYIPE 243
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 30/32 (93%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGDI F+ +++G+++
Sbjct: 181 MIKELLDTRIRPTVQEDGGDIVFMGYENGIVK 212
>sp|Q9UMS0|NFU1_HUMAN NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Homo
sapiens GN=NFU1 PE=1 SV=2
Length = 254
Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 106/152 (69%), Positives = 132/152 (86%), Gaps = 1/152 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 84 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 143
Query: 96 FFSSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVV 155
FF+SGLP++T+ PS + E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+V
Sbjct: 144 FFASGLPLVTEETPSGEAG-SEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYKGFEDGIV 202
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
+LK+QGSCTSCPSS++TLKNG+QNMLQFYIPE
Sbjct: 203 QLKLQGSCTSCPSSIITLKNGIQNMLQFYIPE 234
Score = 53.9 bits (128), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 29/32 (90%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG+++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYKGFEDGIVQ 203
>sp|Q9QZ23|NFU1_MOUSE NFU1 iron-sulfur cluster scaffold homolog, mitochondrial OS=Mus
musculus GN=Nfu1 PE=1 SV=2
Length = 255
Score = 221 bits (564), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/153 (67%), Positives = 130/153 (84%), Gaps = 1/153 (0%)
Query: 36 QTIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMD 95
+T+DFPT AA+ SPL + LFRIEGVKSVFFG DFITVTK+++++DW LLKP+I+ATIMD
Sbjct: 82 RTMDFPTPAAAFRSPLARQLFRIEGVKSVFFGPDFITVTKENEELDWNLLKPDIYATIMD 141
Query: 96 FFSSGLPVLTD-AQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGV 154
FF+SGLP++T+ P E+DDE V MIKELLDTRIRPTVQEDGGD+ + F+ G+
Sbjct: 142 FFASGLPLVTEETPPPPGEAGSEEDDEVVAMIKELLDTRIRPTVQEDGGDVIYRGFEDGI 201
Query: 155 VKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
V+LK+QGSCTSCPSS++TLK+G+QNMLQFYIPE
Sbjct: 202 VRLKLQGSCTSCPSSIITLKSGIQNMLQFYIPE 234
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
MIKELLDTRIRPTVQEDGGD+ + F+DG++
Sbjct: 172 MIKELLDTRIRPTVQEDGGDVIYRGFEDGIVR 203
>sp|Q9C8J2|NIFU5_ARATH NifU-like protein 5, mitochondrial OS=Arabidopsis thaliana GN=NIFU5
PE=2 SV=1
Length = 275
Score = 194 bits (492), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 120/155 (77%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K +F I+GV VF+G DF+TVTK DD V W +LKP+IFA +MDF
Sbjct: 101 SADFPNSRSAMSSPLAKAIFAIDGVVRVFYGSDFVTVTKSDD-VTWDILKPDIFAVVMDF 159
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D+Q ++ DT IHEDD ETV MIKELL+TRIRP+VQ+DGGDI++ F +
Sbjct: 160 YSSGQPLFLDSQATAAKDTAIHEDDSETVAMIKELLETRIRPSVQDDGGDIEYCGFDTET 219
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKL+MQG+C+ CPSS VTLK+G++NML Y+ E
Sbjct: 220 GIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSE 254
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGV--LEEPGQTIDFPTGQAAYCSPLGKLLF 56
MIKELL+TRIRP+VQ+DGGDI++ F + G+ L G P+ S + +L
Sbjct: 190 MIKELLETRIRPSVQDDGGDIEYCGFDTETGIVKLRMQGACSGCPSSSVTLKSGIENMLM 249
Query: 57 R----IEGVKSVFFGHD 69
++GV+ F G +
Sbjct: 250 HYVSEVKGVEQEFDGEE 266
>sp|Q9LIG6|NIFU4_ARATH NifU-like protein 4, mitochondrial OS=Arabidopsis thaliana GN=NIFU4
PE=2 SV=1
Length = 283
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 91/155 (58%), Positives = 118/155 (76%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ DFP ++A SPL K ++ I+GV VFFG DF+TVTK DD V W +LKPEIFA +MDF
Sbjct: 106 SADFPNVRSALGSPLAKSIYSIDGVVRVFFGSDFVTVTKSDD-VSWDILKPEIFAAVMDF 164
Query: 97 FSSGLPVLTDAQPSS--DTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
+SSG P+ D+Q ++ DT I EDD ETV MIKELL+TRIRP VQ+DGGDI++ F +
Sbjct: 165 YSSGQPLFLDSQAAAAKDTAISEDDSETVAMIKELLETRIRPAVQDDGGDIEYCGFDPES 224
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G+VKL+MQG+C+ CPSS VTLK+G++NML Y+ E
Sbjct: 225 GIVKLRMQGACSGCPSSSVTLKSGIENMLMHYVSE 259
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 8/77 (10%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISF--QDGV--LEEPGQTIDFPTGQAAYCSPLGKLLF 56
MIKELL+TRIRP VQ+DGGDI++ F + G+ L G P+ S + +L
Sbjct: 195 MIKELLETRIRPAVQDDGGDIEYCGFDPESGIVKLRMQGACSGCPSSSVTLKSGIENMLM 254
Query: 57 R----IEGVKSVFFGHD 69
++GV+ F G D
Sbjct: 255 HYVSEVKGVEQEFDGED 271
>sp|Q9UUB8|YH9J_SCHPO NifU-like protein C1709.19c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC1709.19c PE=3 SV=1
Length = 260
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/155 (50%), Positives = 109/155 (70%), Gaps = 5/155 (3%)
Query: 37 TIDFPTGQAAYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDF 96
+ +F GQ SPL + LF I+GV S+FFG DFITV+K +W +KPE+F+ IM+
Sbjct: 71 SCEFMRGQGTVNSPLAQKLFDIDGVDSIFFGKDFITVSK-GAGTEWAQMKPEVFSVIMEH 129
Query: 97 FSSGLPVLTDA--QPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QG 152
S+G PVL++ + +SDT I E D + V MIKEL++T IRP++QEDGGD++F F +
Sbjct: 130 LSNGSPVLSEEPLKGASDTQILESDSQIVAMIKELIETSIRPSIQEDGGDVEFRGFDEKT 189
Query: 153 GVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G V LK++G+C +C SS VTLKNG+Q ML+ YIPE
Sbjct: 190 GTVSLKLRGACRTCSSSAVTLKNGIQQMLKHYIPE 224
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 24/28 (85%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQD 28
MIKEL++T IRP++QEDGGD++F F +
Sbjct: 160 MIKELIETSIRPSIQEDGGDVEFRGFDE 187
>sp|P32860|NFU1_YEAST NifU-like protein, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NFU1 PE=1 SV=2
Length = 256
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 84/144 (58%), Gaps = 17/144 (11%)
Query: 60 GVKSVFFGHDFITVTKQDDDVDWKLLKPEI-------FATIMDFFSSGLPVLTDAQPSSD 112
GV+S+ G DF+T+ K D V W +KPEI A D S + + +
Sbjct: 78 GVESLMIGDDFLTINK-DRMVHWNSIKPEIIDLLTKQLAYGEDVISKEFHAVQEEEGEGG 136
Query: 113 TVIH-------EDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF--QGGVVKLKMQGSC 163
I+ E+D+E ++I+EL+DTRIRP + EDGGDI + + + G V L++QG+C
Sbjct: 137 YKINMPKFELTEEDEEVSELIEELIDTRIRPAILEDGGDIDYRGWDPKTGTVYLRLQGAC 196
Query: 164 TSCPSSVVTLKNGVQNMLQFYIPE 187
TSC SS VTLK G+++ML+ Y+ E
Sbjct: 197 TSCSSSEVTLKYGIESMLKHYVDE 220
Score = 38.5 bits (88), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 20/23 (86%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQF 23
+I+EL+DTRIRP + EDGGDI +
Sbjct: 156 LIEELIDTRIRPAILEDGGDIDY 178
>sp|Q84LK7|NIFU1_ORYSJ NifU-like protein 1, chloroplastic OS=Oryza sativa subsp. japonica
GN=NIFU1 PE=1 SV=1
Length = 226
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 102 PVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQG 161
P++ A D V T ++ +LD ++RP + DGGD+ G VV+LK+QG
Sbjct: 56 PLVVGAIAGLDPVTAVQLPLTAGNVESVLD-QVRPYLTADGGDVALHEIAGNVVRLKLQG 114
Query: 162 SCTSCPSSVVTLKNGVQNMLQFYIPETT 189
+C SCPSS++T+K G++ L IP+
Sbjct: 115 ACGSCPSSLITIKRGIERRLMEKIPDVA 142
>sp|P33179|NIFU_ANASL Nitrogen fixation protein NifU (Fragment) OS=Anabaena sp. (strain
L31) GN=nifU PE=3 SV=1
Length = 112
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 121 ETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNM 180
+ + +I+++LD +RP + DGGD++ G +VK+ +QG+C SCPSS TLK +++
Sbjct: 39 QKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCPSSTATLKIAIESR 98
Query: 181 LQFYIPETTPGLNME 195
L+ I P L +E
Sbjct: 99 LRDRI---NPSLVVE 110
>sp|Q93W20|NIFU2_ARATH NifU-like protein 2, chloroplastic OS=Arabidopsis thaliana GN=NIFU2
PE=1 SV=1
Length = 235
Score = 60.5 bits (145), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
T + ++ +LD IRP + DGG++ G +V++K+QG+C SCPSS +T+K G++ L
Sbjct: 86 TEENVESVLD-EIRPYLMSDGGNVALHEIDGNIVRVKLQGACGSCPSSTMTMKMGIERRL 144
Query: 182 QFYIPE 187
IPE
Sbjct: 145 MEKIPE 150
>sp|Q84RQ7|NIFU3_ARATH NifU-like protein 3, chloroplastic OS=Arabidopsis thaliana GN=NIFU3
PE=2 SV=1
Length = 236
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 122 TVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
T + ++ +LD +RP++ DGG++ G VV LK+QG+C SCPSS +TLK G+++ L
Sbjct: 85 TEENVERVLD-EVRPSLMADGGNVALHEIDGLVVVLKLQGACGSCPSSSMTLKMGIESRL 143
Query: 182 QFYIPE 187
+ IPE
Sbjct: 144 RDKIPE 149
>sp|O32119|YUTI_BACSU Putative nitrogen fixation protein YutI OS=Bacillus subtilis
(strain 168) GN=yutI PE=3 SV=1
Length = 111
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 121 ETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNM 180
E + ++E+LD ++RP + DGGD + + G+VKL++ G+C SCPSS +TLK G++
Sbjct: 38 EMKEQVQEVLD-KLRPFLLRDGGDCELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERA 96
Query: 181 L 181
L
Sbjct: 97 L 97
>sp|P20628|NIFU_NOSS1 Nitrogen fixation protein NifU OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=nifU PE=3 SV=1
Length = 300
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 121 ETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNM 180
+ + +I+++LD +RP + DGGD++ G +VK+ +QG+C SC SS TLK +++
Sbjct: 227 QKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESR 286
Query: 181 LQFYIPETTPGLNME 195
L+ I P L +E
Sbjct: 287 LRDRI---NPSLVVE 298
>sp|Q00241|NIFU_PLEBO Nitrogen fixation protein NifU (Fragment) OS=Plectonema boryanum
GN=nifU PE=3 SV=1
Length = 205
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 121 ETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNM 180
+ + +I+++LD +RP + DGGD++ G VK+ ++G+C SC SS TLK+ V+
Sbjct: 132 QKIALIQKVLDEEVRPVLIADGGDVELYDVDGDFVKVTLKGACGSCASSTATLKDAVEAK 191
Query: 181 LQFYI 185
L+ +
Sbjct: 192 LRLRV 196
>sp|Q43885|NIFU_TRIAZ Nitrogen fixation protein NifU OS=Trichormus azollae GN=nifU PE=3
SV=1
Length = 300
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 46/75 (61%), Gaps = 3/75 (4%)
Query: 121 ETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNM 180
+ + +I+++LD +RP + DGGD++ G +VK+ +QG+C SC SS TLK +++
Sbjct: 227 QKIALIQKVLDEEVRPVLIADGGDVELYDVDGDIVKVVLQGACGSCSSSTATLKIAIESR 286
Query: 181 LQFYIPETTPGLNME 195
L+ I P L +E
Sbjct: 287 LRDRI---NPSLVVE 298
>sp|Q93W77|NIFU1_ARATH NifU-like protein 1, chloroplastic OS=Arabidopsis thaliana GN=NIFU1
PE=1 SV=1
Length = 231
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 134 IRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQ 182
+RP + DGG++ +S + GVV LK+QG+CTSCPSS T+ G++ +L+
Sbjct: 97 VRPFLISDGGNVDVVSVEDGVVSLKLQGACTSCPSSSTTMTMGIERVLK 145
>sp|P40432|YVN2_AZOVI Uncharacterized 10.3 kDa protein in vnfA 5'region OS=Azotobacter
vinelandii PE=3 SV=1
Length = 96
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 121 ETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNM 180
E++ +++E ++ R+RP VQ DGGD++ ++ Q +V+L+++G+C C S TL GV+
Sbjct: 23 ESLPLVRETVE-RLRPGVQRDGGDLELVAVQDNIVRLRLKGACVGCAMSAQTL-GGVRRE 80
Query: 181 L 181
L
Sbjct: 81 L 81
Score = 34.3 bits (77), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 1 MIKELLDTRIRPTVQEDGGDIQFISFQDGVLE 32
+++E ++ R+RP VQ DGGD++ ++ QD ++
Sbjct: 27 LVRETVE-RLRPGVQRDGGDLELVAVQDNIVR 57
>sp|Q10373|NIFU2_RHOCA Nitrogen fixation protein NifU 2 OS=Rhodobacter capsulatus GN=nifU2
PE=3 SV=1
Length = 142
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 114 VIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTL 173
V+ E ++E ++ EL+ +RP Q DGGDI+ I G V++++ GSC C S TL
Sbjct: 62 VVSEPEEEAA-VVAELI-AEMRPMFQRDGGDIELIGLTGATVQVRLSGSCAGCMMSARTL 119
Query: 174 KNGVQNML 181
VQ+ L
Sbjct: 120 ST-VQHQL 126
>sp|Q01180|NIFU_RHOSH Nitrogen fixation protein NifU OS=Rhodobacter sphaeroides GN=nifU
PE=3 SV=1
Length = 246
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 106 DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTS 165
D+QP + E ++I E++++ +RP ++ DGGD+ ++ +G V++ + G+C+
Sbjct: 148 DSQPRIVRDVPLAPAEEARLIAEVIES-VRPRLRADGGDVTLVAVEGSKVRVHLTGACSG 206
Query: 166 CPSSVVTLKNGVQNML 181
C + +TL G+Q L
Sbjct: 207 CQLAALTL-GGLQKRL 221
>sp|P05340|NIFU_AZOVI Nitrogen fixation protein NifU OS=Azotobacter vinelandii GN=nifU
PE=3 SV=2
Length = 312
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 134 IRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
IRPT+Q D GD++ I G V +K+ G+CT C + +TL G+Q L
Sbjct: 243 IRPTLQRDKGDVELIDVDGKNVYVKLTGACTGCQMASMTL-GGIQQRL 289
>sp|P23121|NIFU_AZOCH Nitrogen fixation protein NifU OS=Azotobacter chroococcum mcd 1
GN=nifU PE=3 SV=1
Length = 309
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 134 IRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
IRPT+Q D GD++ I G + +K+ G+CT C + +TL G+Q L
Sbjct: 241 IRPTLQRDKGDVELIDVDGKNIYVKLTGACTGCQMASMTL-GGIQQRL 287
>sp|Q07178|NIFU1_RHOCA Nitrogen fixation protein NifU 1 OS=Rhodobacter capsulatus GN=nifU1
PE=3 SV=1
Length = 135
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 123 VQMIKELLDTRIRPTVQEDGGDIQFISFQGGVVKLKMQGSCTSCPSSVVTLKNGVQNML 181
V I+ L+D +RPT + DGGDI+ + +G V + + G+C C + TL GVQ +
Sbjct: 63 VTRIRALIDE-MRPTFRRDGGDIELVRVEGAKVIVHLSGACAGCMLAGQTL-YGVQKRI 119
>sp|B2FM87|NFUA_STRMK Fe/S biogenesis protein NfuA OS=Stenotrophomonas maltophilia
(strain K279a) GN=nfuA PE=3 SV=1
Length = 199
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 43/94 (45%), Gaps = 3/94 (3%)
Query: 98 SSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI--QFISFQGGVV 155
S+G LT P D V+ + +++ I P + GG + Q +S +G VV
Sbjct: 85 SAGTQQLTIKAPRIKGEAPGDAASLVERVHWVVENEINPQLASHGGKVAVQEVSAEG-VV 143
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
L+ G C C + VTLK G++ L +P T
Sbjct: 144 LLRFGGGCQGCGMADVTLKQGIEKTLMGRVPGVT 177
>sp|C3LSE7|NFUA_VIBCM Fe/S biogenesis protein NfuA OS=Vibrio cholerae serotype O1 (strain
M66-2) GN=nfuA PE=3 SV=1
Length = 195
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 12/137 (8%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT 105
+YC P E V++ + F + D++ L+ + + D S L T
Sbjct: 45 SYCPP--------EAVEATDTEYPFSGFSAYVDELSLPFLEEAVIDFVTDKMGSQL---T 93
Query: 106 DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG-GVVKLKMQGSCT 164
P++ DD ++ ++ L T++ P + GG ++ IS GV ++ G C
Sbjct: 94 LKAPNAKMRKVSDDASLMERVEYALQTQVNPQLAGHGGHVRLISISDDGVALVQFGGGCN 153
Query: 165 SCPSSVVTLKNGVQNML 181
C VTLK G++ L
Sbjct: 154 GCSMVDVTLKEGIEKEL 170
>sp|Q9KNL2|NFUA_VIBCH Fe/S biogenesis protein NfuA OS=Vibrio cholerae serotype O1 (strain
ATCC 39315 / El Tor Inaba N16961) GN=nfuA PE=3 SV=1
Length = 195
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 58/137 (42%), Gaps = 12/137 (8%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT 105
+YC P E V++ + F + D++ L+ + + D S L T
Sbjct: 45 SYCPP--------EAVEATDTEYPFSGFSAYVDELSLPFLEEAVIDFVTDKMGSQL---T 93
Query: 106 DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG-GVVKLKMQGSCT 164
P++ DD ++ ++ L T++ P + GG ++ IS GV ++ G C
Sbjct: 94 LKAPNAKMRKVSDDASLMERVEYALQTQVNPQLAGHGGHVRLISISDDGVALVQFGGGCN 153
Query: 165 SCPSSVVTLKNGVQNML 181
C VTLK G++ L
Sbjct: 154 GCSMVDVTLKEGIEKEL 170
>sp|A5UGU4|NFUA_HAEIG Fe/S biogenesis protein NfuA OS=Haemophilus influenzae (strain
PittGG) GN=nfuA PE=3 SV=1
Length = 198
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 104 LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGS 162
LT P++ DD ++ ++ ++ T+I P + GG I I + G L+ G
Sbjct: 95 LTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQLANHGGRITLIEITEDGYAVLQFGGG 154
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETTPG 191
C C VTLK+GV+ L P G
Sbjct: 155 CNGCSMVDVTLKDGVEKQLVSLFPNELKG 183
>sp|A5UA56|NFUA_HAEIE Fe/S biogenesis protein NfuA OS=Haemophilus influenzae (strain
PittEE) GN=nfuA PE=3 SV=1
Length = 198
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 104 LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGS 162
LT P++ DD ++ ++ ++ T+I P + GG I I + G L+ G
Sbjct: 95 LTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQLANHGGRITLIEITEDGYAVLQFGGG 154
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETTPG 191
C C VTLK+GV+ L P G
Sbjct: 155 CNGCSMVDVTLKDGVEKQLVSLFPNELKG 183
>sp|Q4QNB2|NFUA_HAEI8 Fe/S biogenesis protein NfuA OS=Haemophilus influenzae (strain
86-028NP) GN=nfuA PE=3 SV=1
Length = 198
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 104 LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGS 162
LT P++ DD ++ ++ ++ T+I P + GG I I + G L+ G
Sbjct: 95 LTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQLANHGGRITLIEITEDGYAVLQFGGG 154
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETTPG 191
C C VTLK+GV+ L P G
Sbjct: 155 CNGCSMVDVTLKDGVEKQLVSLFPNELKG 183
>sp|Q8E8P2|NFUA_SHEON Fe/S biogenesis protein NfuA OS=Shewanella oneidensis (strain MR-1)
GN=nfuA PE=3 SV=1
Length = 192
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 104 LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG-GVVKLKMQGS 162
LT P++ D V+ I+ ++ + I P + GG+I + G GV L+ G
Sbjct: 89 LTLKAPNAKMRKVAGDAPLVERIEYVIQSEINPQLASHGGNIMLVEITGEGVAVLQFGGG 148
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETTPGLN 193
C C +TLK+G++ L P G+
Sbjct: 149 CNGCSQVDITLKDGIEKQLLDMFPGELTGVR 179
>sp|P31774|NFUA_HAEIN Fe/S biogenesis protein NfuA OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=nfuA PE=1 SV=2
Length = 198
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 104 LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGS 162
LT P++ DD ++ ++ ++ T+I P + GG I I + G L+ G
Sbjct: 95 LTLKAPNAKMRKVADDAPLIERVEYVIQTQINPQLANHGGRITLIEITEDGYAVLQFGGG 154
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETTPG 191
C C VTLK+GV+ L P G
Sbjct: 155 CNGCSMVDVTLKDGVEKQLVSLFPNELKG 183
>sp|Q5QZC8|NFUA_IDILO Fe/S biogenesis protein NfuA OS=Idiomarina loihiensis (strain ATCC
BAA-735 / DSM 15497 / L2-TR) GN=nfuA PE=3 SV=1
Length = 192
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
Query: 104 LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGS 162
LT P++ DD ++ ++ ++ I P + GG + GV L+ G
Sbjct: 89 LTLKAPNAKARKVADDAPLIERVEYVIQAEINPQLASHGGQVMISEITDDGVAILQFGGG 148
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETTPGL 192
C C VTLKNG++ L PE G+
Sbjct: 149 CNGCSMIDVTLKNGIEKELLERFPEEVKGV 178
>sp|Q089F8|NFUA_SHEFN Fe/S biogenesis protein NfuA OS=Shewanella frigidimarina (strain
NCIMB 400) GN=nfuA PE=3 SV=1
Length = 192
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Query: 104 LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGS 162
LT P++ D V+ I+ ++ + I P + GG+I + + GV L+ G
Sbjct: 89 LTLKAPNAKMRKVSGDAPLVERIEYIIQSEINPQLASHGGNIMLVEITEAGVAVLQFGGG 148
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETTPGLN 193
C C +TLK+G++ L P G+
Sbjct: 149 CNGCSQVDITLKDGIEKQLLDMFPTELTGVR 179
>sp|Q8PKQ2|NFUA_XANAC Fe/S biogenesis protein NfuA OS=Xanthomonas axonopodis pv. citri
(strain 306) GN=nfuA PE=3 SV=1
Length = 199
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Query: 98 SSGLPVLTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDI--QFISFQGGVV 155
S+G LT P + V+ ++ +++ I P + GG + Q +S +G VV
Sbjct: 85 STGNQQLTIKAPKIKGEAPAESASMVERVRWVVENEINPQLASHGGRVAVQEVSAEG-VV 143
Query: 156 KLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
L+ G C C + VTLK G++ L +P T
Sbjct: 144 LLRFGGGCHGCGMADVTLKQGIEKTLMGRVPGVT 177
>sp|B4EZM8|NFUA_PROMH Fe/S biogenesis protein NfuA OS=Proteus mirabilis (strain HI4320)
GN=nfuA PE=3 SV=1
Length = 192
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Query: 104 LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGS 162
LT P++ DD ++ ++ +L ++I P + GG + + + G L+ G
Sbjct: 89 LTLKAPNAKMRKVADDAPLIERVEYVLQSQINPQLASHGGRVSLMEITEDGYAILQFGGG 148
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETTPGL 192
C C VTLK+G++ L PE G+
Sbjct: 149 CNGCSMIDVTLKDGIEKELLNLFPEELKGV 178
>sp|Q056Z1|NFUA_BUCCC Fe/S biogenesis protein NfuA OS=Buchnera aphidicola subsp. Cinara
cedri (strain Cc) GN=nfuA PE=3 SV=1
Length = 193
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 3/110 (2%)
Query: 83 KLLKPEIFATIMDFFSSGLPV-LTDAQPSSDTVIHEDDDETVQ-MIKELLDTRIRPTVQE 140
KL+ P + +I+D + L +T P + + + +Q IK L T+I P +
Sbjct: 68 KLMLPFLKDSIIDLVKNDLGTKITLKAPYAKILNKSKNFSQLQNSIKNFLTTQINPKLLL 127
Query: 141 DGGDIQFISFQ-GGVVKLKMQGSCTSCPSSVVTLKNGVQNMLQFYIPETT 189
GG + GVV LK G C C +TLK G++ L PE +
Sbjct: 128 HGGSVALYDITDSGVVFLKFSGGCNGCSMIDITLKKGIEKKLIKNFPEIS 177
>sp|B4SPV3|NFUA_STRM5 Fe/S biogenesis protein NfuA OS=Stenotrophomonas maltophilia
(strain R551-3) GN=nfuA PE=3 SV=1
Length = 199
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 118 DDDETVQMIKELLDTRIRPTVQEDGGDI--QFISFQGGVVKLKMQGSCTSCPSSVVTLKN 175
D V+ + +++ I P + GG + Q +S +G VV L+ G C C + VTLK
Sbjct: 105 DAASLVERVHWVVENEINPQLASHGGKVAVQEVSAEG-VVLLRFGGGCQGCGMADVTLKQ 163
Query: 176 GVQNMLQFYIPETT 189
G++ L +P T
Sbjct: 164 GIEKTLMGRVPGVT 177
>sp|B0TNS0|NFUA_SHEHH Fe/S biogenesis protein NfuA OS=Shewanella halifaxensis (strain
HAW-EB4) GN=nfuA PE=3 SV=1
Length = 192
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 1/90 (1%)
Query: 104 LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGS 162
LT P++ DD + I+ ++ + I P + GG+I + + G+ L+ G
Sbjct: 89 LTLKAPNAKMRKVSDDASLSERIEYVIQSEINPQLASHGGNIMLVEITEEGIAVLQFGGG 148
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPETTPGL 192
C C VTLK+G++ L P G+
Sbjct: 149 CNGCSMVDVTLKDGIEKQLLEMFPSELTGV 178
>sp|C1DLW0|NFUA_AZOVD Fe/S biogenesis protein NfuA OS=Azotobacter vinelandii (strain DJ /
ATCC BAA-1303) GN=nfuA PE=3 SV=1
Length = 194
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 104 LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISF-QGGVVKLKMQGS 162
LT P++ + ++D + I L T I P + GG + + + G+ L+ G
Sbjct: 92 LTIKAPNAKVPMIDEDSPLGERINYYLQTEINPGLASHGGQVSLVDIVEEGIAVLRFGGG 151
Query: 163 CTSCPSSVVTLKNGVQNMLQFYIPE 187
C C +TLK+GV+ L IP+
Sbjct: 152 CQGCGMVDMTLKDGVEKTLLERIPD 176
>sp|A5F4R9|NFUA_VIBC3 Fe/S biogenesis protein NfuA OS=Vibrio cholerae serotype O1 (strain
ATCC 39541 / Ogawa 395 / O395) GN=nfuA PE=3 SV=1
Length = 195
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 12/137 (8%)
Query: 46 AYCSPLGKLLFRIEGVKSVFFGHDFITVTKQDDDVDWKLLKPEIFATIMDFFSSGLPVLT 105
+YC P E V++ + F + D + L+ + + D S LT
Sbjct: 45 SYCPP--------EAVEATDTEYPFSGFSAYVDGLSLPFLEEAVIDFVTDKMGS---QLT 93
Query: 106 DAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQG-GVVKLKMQGSCT 164
P++ DD ++ ++ L T++ P + GG ++ IS GV ++ G C
Sbjct: 94 LKAPNAKMRKVSDDASLMERVEYALQTQVNPQLAGHGGHVRLISISDDGVALVQFGGGCN 153
Query: 165 SCPSSVVTLKNGVQNML 181
C VTLK G++ L
Sbjct: 154 GCSMVDVTLKEGIEKEL 170
>sp|B0V9L0|NFUA_ACIBY Fe/S biogenesis protein NfuA OS=Acinetobacter baumannii (strain
AYE) GN=nfuA PE=3 SV=1
Length = 212
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 38/89 (42%), Gaps = 5/89 (5%)
Query: 104 LTDAQPSSDTVIHEDDDETVQMIKELLDTRIRPTVQEDGGDIQFISFQ-----GGVVKLK 158
LT P+S D + I +L I P + GG+ + Q G LK
Sbjct: 105 LTFRAPNSKVPRVGPDASIEERITYVLQAEINPGLAGHGGNCSLVEVQDDPEHGLTAVLK 164
Query: 159 MQGSCTSCPSSVVTLKNGVQNMLQFYIPE 187
G C C + VTLK GV+ L+ +IPE
Sbjct: 165 FGGGCQGCSAIDVTLKQGVETTLKEHIPE 193
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.139 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,102,025
Number of Sequences: 539616
Number of extensions: 3227421
Number of successful extensions: 8630
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 162
Number of HSP's that attempted gapping in prelim test: 8405
Number of HSP's gapped (non-prelim): 266
length of query: 195
length of database: 191,569,459
effective HSP length: 111
effective length of query: 84
effective length of database: 131,672,083
effective search space: 11060454972
effective search space used: 11060454972
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)