Query psy11532
Match_columns 260
No_of_seqs 216 out of 2261
Neff 8.4
Searched_HMMs 46136
Date Fri Aug 16 20:50:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11532.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11532hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1501 Alpha-glucosidases, fa 100.0 2.9E-41 6.3E-46 326.7 9.0 156 102-260 504-661 (772)
2 PRK10658 putative alpha-glucos 100.0 2.3E-39 4.9E-44 310.9 10.9 150 106-260 510-659 (665)
3 PF01055 Glyco_hydro_31: Glyco 100.0 1.7E-39 3.7E-44 301.6 9.1 153 106-260 280-432 (441)
4 KOG1066|consensus 100.0 7.5E-39 1.6E-43 295.7 10.3 155 106-260 612-767 (915)
5 PRK10426 alpha-glucosidase; Pr 100.0 1.1E-37 2.5E-42 298.4 10.5 142 114-260 471-614 (635)
6 PLN02763 hydrolase, hydrolyzin 100.0 2.1E-34 4.6E-39 281.7 7.3 128 114-243 451-579 (978)
7 KOG1066|consensus 100.0 2.4E-31 5.3E-36 246.2 11.9 136 1-136 707-843 (915)
8 KOG1065|consensus 100.0 1.9E-29 4.1E-34 239.5 4.2 144 114-260 555-699 (805)
9 COG1501 Alpha-glucosidases, fa 99.9 2.4E-26 5.1E-31 223.2 12.6 125 1-129 604-728 (772)
10 PLN02763 hydrolase, hydrolyzin 99.9 9.3E-25 2E-29 214.2 12.2 114 1-127 538-652 (978)
11 PF01055 Glyco_hydro_31: Glyco 99.8 3.9E-20 8.4E-25 172.0 9.2 67 1-69 375-441 (441)
12 PRK10426 alpha-glucosidase; Pr 99.8 4.6E-20 9.9E-25 177.3 7.7 69 1-72 558-626 (635)
13 KOG1065|consensus 99.8 1.1E-19 2.4E-24 173.3 7.7 102 1-119 641-743 (805)
14 cd06602 GH31_MGAM_SI_GAA This 99.8 8.5E-20 1.8E-24 163.9 2.2 94 106-199 246-339 (339)
15 PRK10658 putative alpha-glucos 99.7 3.6E-18 7.9E-23 164.8 7.8 63 1-66 603-665 (665)
16 cd06600 GH31_MGAM-like This fa 99.4 2E-13 4.4E-18 121.7 2.0 76 106-181 242-317 (317)
17 cd06603 GH31_GANC_GANAB_alpha 99.3 4.5E-13 9.7E-18 120.6 2.0 76 106-181 264-339 (339)
18 cd06604 GH31_glucosidase_II_Ma 99.3 8.3E-13 1.8E-17 118.9 2.0 68 114-181 272-339 (339)
19 cd06596 GH31_CPE1046 CPE1046 i 98.9 6.5E-11 1.4E-15 101.0 -1.8 57 115-171 205-261 (261)
20 cd06593 GH31_xylosidase_YicI Y 97.9 2.7E-06 5.9E-11 75.6 -0.1 58 106-166 251-308 (308)
21 cd06598 GH31_transferase_CtsZ 97.6 1.5E-05 3.2E-10 71.3 -0.2 50 114-164 268-317 (317)
22 cd06601 GH31_lyase_GLase GLase 97.1 9.3E-05 2E-09 66.5 -0.9 50 115-164 265-332 (332)
23 cd06595 GH31_xylosidase_XylS-l 96.0 0.00098 2.1E-08 58.9 -1.8 51 106-156 239-291 (292)
24 cd06591 GH31_xylosidase_XylS X 95.0 0.004 8.6E-08 55.8 -1.3 41 116-156 277-318 (319)
25 cd06589 GH31 The enzymes of gl 95.0 0.0034 7.4E-08 54.6 -1.7 44 114-157 222-265 (265)
26 cd06597 GH31_transferase_CtsY 93.6 0.011 2.5E-07 53.3 -1.6 38 114-151 287-329 (340)
27 cd06599 GH31_glycosidase_Aec37 91.8 0.02 4.3E-07 51.2 -2.6 42 114-156 274-316 (317)
28 cd06594 GH31_glucosidase_YihQ 91.3 0.03 6.5E-07 50.1 -1.9 43 114-156 274-316 (317)
29 cd06592 GH31_glucosidase_KIAA1 89.8 0.028 6.2E-07 49.9 -3.4 37 114-157 267-303 (303)
30 cd00928 Cyt_c_Oxidase_VIIa Cyt 37.3 19 0.00041 23.4 1.1 11 57-67 16-26 (55)
31 COG3280 TreY Maltooligosyl tre 32.9 32 0.00069 34.4 2.3 82 155-252 775-874 (889)
32 TIGR02401 trehalose_TreY malto 31.4 61 0.0013 33.0 4.0 93 146-252 707-811 (825)
33 PRK14511 maltooligosyl trehalo 28.9 88 0.0019 32.1 4.7 91 152-254 766-865 (879)
34 PRK00364 groES co-chaperonin G 25.6 56 0.0012 23.6 2.0 25 7-31 6-30 (95)
35 COG0809 QueA S-adenosylmethion 25.5 62 0.0013 29.2 2.6 26 2-28 105-131 (348)
36 PF09196 DUF1953: Domain of un 24.6 2.1E+02 0.0045 18.7 4.7 42 204-247 13-54 (66)
37 PRK14533 groES co-chaperonin G 23.1 62 0.0013 23.3 1.8 26 6-31 5-30 (91)
38 PF09008 Head_binding: Head bi 20.3 24 0.00053 26.2 -0.8 43 34-77 23-67 (114)
No 1
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.9e-41 Score=326.75 Aligned_cols=156 Identities=33% Similarity=0.614 Sum_probs=144.0
Q ss_pred EEEeeCCCccc--cccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHHhhHHHHHHHHHHhhc
Q psy11532 102 NLYLDDGQSYD--YRKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARYALLPYWYTLFHTQEI 179 (260)
Q Consensus 102 ~ly~DDG~s~~--y~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~~l~py~y~~~~~~~~ 179 (260)
-+-.|-|--.. ....|++.||+++..++|+||.|++ +...++||.|++++.+++|+++++||+|+|||||++.+|++
T Consensus 504 ~wg~DiGGF~g~~~~~~EL~~RW~q~g~F~P~~R~H~~-d~~~rePW~~~e~~~~i~r~~~~lR~~LlPYiYt~~~~a~~ 582 (772)
T COG1501 504 FWGHDIGGFTGGDDPTAELYIRWYQFGAFSPIFRLHGN-DNIPREPWAFGEETEEIVREYIQLRYRLLPYIYTLAAEASE 582 (772)
T ss_pred cccccccccCCCCCCCHHHHHHHHHHHhcCchhhhhCC-CCCCCCCccCChhHHHHHHHHHHHHHccchHHHHHHHHHhc
Confidence 33346543322 4566788899999999999999998 77899999999999999999999999999999999999999
Q ss_pred CCCceecccccccCCChhhhhccCeeeeCCceEEEeecCCCCeEEEEEeCCCCCcEEECCCCcEEeCCeEEEEEcCCCCC
Q psy11532 180 SGAPVIRPLWYEFPQDKETFAMENQYLIGDSILVRPVTDPGATQVSVYFPRADEVWFDRDTYEAFTQTGSVTIAVSLSKI 259 (260)
Q Consensus 180 ~G~pi~rpl~~~~p~d~~~~~~~~q~~~G~~lLvaPv~~~~~~~~~vylP~~~~~W~~~~~~~~~~g~~~~~~~~~l~~i 259 (260)
+|.|+|||||++||+|+.++++++|||||++||||||+++++++|+||||+| .|||+|||+.+.||+++++++|+++|
T Consensus 583 tG~P~mRplf~~fp~D~~~~~iddqym~G~~lLVAPV~~eg~~~r~vyLP~g--~W~d~~tg~~~~Gg~~i~~~apl~~i 660 (772)
T COG1501 583 TGLPMMRPLFLEFPEDETTYNLDDQYMFGDDLLVAPVVEEGQTSREVYLPEG--TWYDFWTGEEYEGGQTITVEAPLETI 660 (772)
T ss_pred cCCcceehhheeCCCChhhhhcccceecccceEEeeccccCcceEEEECCCc--eEEEccCCCEEeCCeeEEEecCccCC
Confidence 9999999999999999999999999999999999999999999999999976 59999999999999999999999999
Q ss_pred C
Q psy11532 260 S 260 (260)
Q Consensus 260 p 260 (260)
|
T Consensus 661 P 661 (772)
T COG1501 661 P 661 (772)
T ss_pred c
Confidence 8
No 2
>PRK10658 putative alpha-glucosidase; Provisional
Probab=100.00 E-value=2.3e-39 Score=310.95 Aligned_cols=150 Identities=24% Similarity=0.373 Sum_probs=137.3
Q ss_pred eCCCccccccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHHhhHHHHHHHHHHhhcCCCcee
Q psy11532 106 DDGQSYDYRKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARYALLPYWYTLFHTQEISGAPVI 185 (260)
Q Consensus 106 DDG~s~~y~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~~l~py~y~~~~~~~~~G~pi~ 185 (260)
|-|.-..-...+++.||+++..++|++|.|+.. ..++||.|++++.+++|+++++||+|+||||+++++|+++|.|||
T Consensus 510 DIGGF~g~~~~ELy~RW~Q~g~f~P~~R~Hg~~--~~~ePW~fg~e~~~i~r~~i~lRy~LlPYlYs~~~~a~~~G~Pim 587 (665)
T PRK10658 510 DIGGFENTATADVYKRWCAFGLLSSHSRLHGSK--SYRVPWAYDEEAVDVVRFFTKLKCRLMPYLYREAAEAHERGTPMM 587 (665)
T ss_pred ccCCCCCCCCHHHHHHHHHhcccChhhcccCCC--CCcCCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 444333333457778899999999999999865 458999999999999999999999999999999999999999999
Q ss_pred cccccccCCChhhhhccCeeeeCCceEEEeecCCCCeEEEEEeCCCCCcEEECCCCcEEeCCeEEEEEcCCCCCC
Q psy11532 186 RPLWYEFPQDKETFAMENQYLIGDSILVRPVTDPGATQVSVYFPRADEVWFDRDTYEAFTQTGSVTIAVSLSKIS 260 (260)
Q Consensus 186 rpl~~~~p~d~~~~~~~~q~~~G~~lLvaPv~~~~~~~~~vylP~~~~~W~~~~~~~~~~g~~~~~~~~~l~~ip 260 (260)
|||+++||+|+.++++++|||||++||||||++++. +++||||+| . |+|+|||++++||+++++.+||++||
T Consensus 588 RPL~~efP~D~~~~~~~~qfmlG~~lLVAPV~~~~~-~r~VYLP~G-~-W~d~~tg~~~~Gg~~i~~~~~l~~iP 659 (665)
T PRK10658 588 RAMVLEFPDDPACDYLDRQYMLGDSLLVAPVFSEAG-DVEYYLPEG-R-WTHLLTGEEVEGGRWHKEQHDFLSLP 659 (665)
T ss_pred cchhccCCCChHHhcCCCceEecCCeEEeEeecCCc-eEEEEcCCC-e-EEEccCCcEEECCEEEEEeCCCccCC
Confidence 999999999999999999999999999999999996 699999998 4 99999999999999999999999998
No 3
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=100.00 E-value=1.7e-39 Score=301.57 Aligned_cols=153 Identities=33% Similarity=0.674 Sum_probs=133.8
Q ss_pred eCCCccccccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHHhhHHHHHHHHHHhhcCCCcee
Q psy11532 106 DDGQSYDYRKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARYALLPYWYTLFHTQEISGAPVI 185 (260)
Q Consensus 106 DDG~s~~y~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~~l~py~y~~~~~~~~~G~pi~ 185 (260)
|-|......+.+++.|++++....|+||+|+......++||.|++++.+++|+++++||+|+||+|+++++++++|.||+
T Consensus 280 DigG~~~~~~~eL~~RW~q~~~f~p~~r~h~~~~~~~~~Pw~~~~~~~~~~r~~~~lRy~L~PY~ys~~~~a~~~G~Pi~ 359 (441)
T PF01055_consen 280 DIGGFSGDPDEELYIRWYQFGAFSPLFRNHGNKPSNPREPWSFGDEAEDIFRRAIRLRYRLLPYIYSLAYEAHATGEPIM 359 (441)
T ss_dssp EET-SBSTSSHHHHHHHHHHHTTSSSEEEEESTTSSB-SGGGSSCTHHHHHHHHHHHHHHCHHHHHHHHHHHHHHT--SE
T ss_pred cccccCCCCCHHHHHHHHHhhcCCcceeecCCcccccccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHccCCCCcc
Confidence 54433333556788889999999999999977777788999999999999999999999999999999999999999999
Q ss_pred cccccccCCChhhhhccCeeeeCCceEEEeecCCCCeEEEEEeCCCCCcEEECCCCcEEeCCeEEEEEcCCCCCC
Q psy11532 186 RPLWYEFPQDKETFAMENQYLIGDSILVRPVTDPGATQVSVYFPRADEVWFDRDTYEAFTQTGSVTIAVSLSKIS 260 (260)
Q Consensus 186 rpl~~~~p~d~~~~~~~~q~~~G~~lLvaPv~~~~~~~~~vylP~~~~~W~~~~~~~~~~g~~~~~~~~~l~~ip 260 (260)
|||+++||+|+.++++++|||+|++||||||+++|.++|+||||+| . |||++||++++||+++++++||+++|
T Consensus 360 Rpl~~~~p~d~~~~~~~~q~m~G~~lLVaPV~~~g~~~~~vylP~G-~-W~d~~tg~~~~gg~~~~~~~~l~~~P 432 (441)
T PF01055_consen 360 RPLFWEFPNDPNAYDIDDQFMFGDDLLVAPVLEPGATSRTVYLPEG-T-WYDFWTGEKYEGGQTITVEAPLDEIP 432 (441)
T ss_dssp EEHHHHSTTSGGGGGTTSSEEETTTEEEE---STTSSEEEEEESSS-E-EEETTTCCEEESSEEEEEE--TTSCE
T ss_pred cccccCCCccHhHhhcCCccccCCCEEEEeeeeecccccEEECCCC-e-EEECCCCCEEECCEEEEEeCCCCccC
Confidence 9999999999999999999999999999999999999999999998 4 99999999999999999999999998
No 4
>KOG1066|consensus
Probab=100.00 E-value=7.5e-39 Score=295.75 Aligned_cols=155 Identities=43% Similarity=0.871 Sum_probs=145.6
Q ss_pred eCCCccccccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHHhhHHHHHHHHHHhhcCCCcee
Q psy11532 106 DDGQSYDYRKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARYALLPYWYTLFHTQEISGAPVI 185 (260)
Q Consensus 106 DDG~s~~y~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~~l~py~y~~~~~~~~~G~pi~ 185 (260)
|-|.-+.--..++..+|++.....||||.|++.+++++|||.|+|.+++++|++++.||+|||||||+|++++.+|.|||
T Consensus 612 DVgGFFgNPd~ELlvRWYQ~gaf~PFFRaHAHiDTkRREPWLf~e~~~~iiRdal~~RY~lLP~wYTlFye~~~tG~Pvm 691 (915)
T KOG1066|consen 612 DVGGFFGNPDPELLVRWYQTGAFQPFFRAHAHIDTKRREPWLFPEQTTQIIRDALRTRYALLPYWYTLFYEHHVTGVPVM 691 (915)
T ss_pred ccccccCCCCHHHHHHHHHhcccchhhhhhccccccccCccccCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCcc
Confidence 44555554556777888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCChhhhhccCeeeeCCceEEEeecCCCCeEEEEEeCCC-CCcEEECCCCcEEeCCeEEEEEcCCCCCC
Q psy11532 186 RPLWYEFPQDKETFAMENQYLIGDSILVRPVTDPGATQVSVYFPRA-DEVWFDRDTYEAFTQTGSVTIAVSLSKIS 260 (260)
Q Consensus 186 rpl~~~~p~d~~~~~~~~q~~~G~~lLvaPv~~~~~~~~~vylP~~-~~~W~~~~~~~~~~g~~~~~~~~~l~~ip 260 (260)
||||++||+|..++.+++|||+|+.|||.||++++.+.++||||.| +++|||+.+++.+.|++++.++|||++||
T Consensus 692 rPl~~e~peD~~~f~iD~Q~~vgsgLLVkPV~e~g~~~v~vylP~g~~evwyd~~s~~~~~g~g~~~vpapl~~iP 767 (915)
T KOG1066|consen 692 RPLFMEFPEDEELFEIDDQFMVGSGLLVKPVTEKGTSEVQVYLPRGKGEVWYDWVSGQEYRGPGTVYVPAPLTSIP 767 (915)
T ss_pred chhHhhCccchhhhcccceEEEccccEEeecccCCcceeEEEcCCCCccEEEEcccCceecCCCcEEecCcccccc
Confidence 9999999999999999999999999999999999999999999965 47899999999999999999999999998
No 5
>PRK10426 alpha-glucosidase; Provisional
Probab=100.00 E-value=1.1e-37 Score=298.40 Aligned_cols=142 Identities=27% Similarity=0.483 Sum_probs=132.4
Q ss_pred ccceeeEEEEEeeccccccccccccCCCcCcccccCc--hhhHHHHHHHHhHHhhHHHHHHHHHHhhcCCCceecccccc
Q psy11532 114 RKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGD--ATTSLVRDALRARYALLPYWYTLFHTQEISGAPVIRPLWYE 191 (260)
Q Consensus 114 ~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~--~~~~~~~~~~~~r~~l~py~y~~~~~~~~~G~pi~rpl~~~ 191 (260)
...|++.||+++..+.|+||+|+.. ..++||.|++ ++.+.+++++++||+|+|||||++++|+++|.||+||||++
T Consensus 471 ~~~EL~~RW~Q~gaF~P~~R~H~~~--~~~epw~f~~~~~~~~~~~~~~~lRy~LlPYlytl~~~a~~tG~Pi~RPL~~~ 548 (635)
T PRK10426 471 RTKELLLRWCEFSAFTPVMRTHEGN--RPGDNWQFDSDAETIAHFARMTRVFTTLKPYLKELVAEAAKTGLPVMRPLFLH 548 (635)
T ss_pred CCHHHHHHHHHHhcCCceeecCCCC--CCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccccc
Confidence 4567888999999999999999854 5689999964 56778889999999999999999999999999999999999
Q ss_pred cCCChhhhhccCeeeeCCceEEEeecCCCCeEEEEEeCCCCCcEEECCCCcEEeCCeEEEEEcCCCCCC
Q psy11532 192 FPQDKETFAMENQYLIGDSILVRPVTDPGATQVSVYFPRADEVWFDRDTYEAFTQTGSVTIAVSLSKIS 260 (260)
Q Consensus 192 ~p~d~~~~~~~~q~~~G~~lLvaPv~~~~~~~~~vylP~~~~~W~~~~~~~~~~g~~~~~~~~~l~~ip 260 (260)
||+|+.++++++|||||++||||||+++++++|+||||+| . |||+|||++++|| ++++++||++||
T Consensus 549 fP~D~~~~~i~~qfm~G~~LLVAPV~~~g~~~r~VYLP~g-~-W~d~~tg~~~~Gg-~i~v~apl~~iP 614 (635)
T PRK10426 549 YEDDAATYTLKYQYLLGRDLLVAPVHEEGRTDWTVYLPED-K-WVHLWTGEAFAGG-EITVEAPIGKPP 614 (635)
T ss_pred CCCChHHhcCCcceEecCCeEEeeeccCCceEEEEECCCC-c-EEECCCCCEEECC-EEEEeCCCCCcC
Confidence 9999999999999999999999999999999999999998 4 9999999999999 999999999998
No 6
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=100.00 E-value=2.1e-34 Score=281.65 Aligned_cols=128 Identities=27% Similarity=0.530 Sum_probs=120.8
Q ss_pred ccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHHhhHHHHHHHHHHhhcCCCceecccccccC
Q psy11532 114 RKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARYALLPYWYTLFHTQEISGAPVIRPLWYEFP 193 (260)
Q Consensus 114 ~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~~l~py~y~~~~~~~~~G~pi~rpl~~~~p 193 (260)
.+.+++.||+++..+.|+||+|+..+...++||.|++++.+++|+++++||+|+|||||++++|+++|.||+|||||+||
T Consensus 451 ~~~ELy~RW~Q~GaF~P~fR~Hs~~gt~~qEPW~fgeev~~i~R~ai~LRYrLLPYiYSL~~eA~~tG~PImRPL~~efP 530 (978)
T PLN02763 451 ATPKLFGRWMGVGAMFPFARGHSEQGTIDHEPWSFGEECEEVCRLALKRRYRLLPHFYTLFYKAHTTGLPVMTPIFFADP 530 (978)
T ss_pred CCHHHHHHHHHHhhhhHHhhhccCCCCCCcCCeecChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCceeeceecCCC
Confidence 35577888999999999999999888889999999999999999999999999999999999999999999999999999
Q ss_pred CChhhhhccCeeeeCCceEEEee-cCCCCeEEEEEeCCCCCcEEECCCCcE
Q psy11532 194 QDKETFAMENQYLIGDSILVRPV-TDPGATQVSVYFPRADEVWFDRDTYEA 243 (260)
Q Consensus 194 ~d~~~~~~~~q~~~G~~lLvaPv-~~~~~~~~~vylP~~~~~W~~~~~~~~ 243 (260)
+|++++++++|||+|++|||||| +++++++|+||||+| . ||||++++.
T Consensus 531 ~D~~a~~iddQFM~G~~LLVAPVv~~~g~tsr~VYLP~G-~-WyDf~t~~~ 579 (978)
T PLN02763 531 KDPSLRKVENSFLLGPLLISASTLPDQGSDNLQHVLPKG-I-WQRFDFDDS 579 (978)
T ss_pred CChHHhccCceEEEcCCeEEcceeccCCceEEEEECCCC-c-EEecCCCCc
Confidence 99999999999999999999998 588999999999998 4 999998864
No 7
>KOG1066|consensus
Probab=99.97 E-value=2.4e-31 Score=246.18 Aligned_cols=136 Identities=43% Similarity=0.913 Sum_probs=128.5
Q ss_pred CCceeEecCCeeEeeccCCCCeEEEEEecCCC-CceeeCCCCeEEecCcEEEEEecCCCceeeeecCeeeeccccccccc
Q psy11532 1 MENQYLIGDSILVRPVTDPGATQVSVYFPRAD-EVWFDRDTYEAFTQTGSVTIAVSLSKIPTYQRGGTIIPLRERVRRAS 79 (260)
Q Consensus 1 ~~~q~m~G~~lLvaPV~~~~~~~~~vylP~g~-~~W~d~~~~~~~~g~~~~~~~~~~~~ipvfvR~G~iip~~~~~~~~~ 79 (260)
+|+|||+|+.|||.||++++..+++||||.|. +.|||+.+++.+.|+|.+.+++|+++||||+|||+|||+.+++++++
T Consensus 707 iD~Q~~vgsgLLVkPV~e~g~~~v~vylP~g~~evwyd~~s~~~~~g~g~~~vpapl~~iPv~qrGGtIip~~~r~RRss 786 (915)
T KOG1066|consen 707 IDDQFMVGSGLLVKPVTEKGTSEVQVYLPRGKGEVWYDWVSGQEYRGPGTVYVPAPLTSIPVFQRGGTIIPTKDRIRRSS 786 (915)
T ss_pred ccceEEEccccEEeecccCCcceeEEEcCCCCccEEEEcccCceecCCCcEEecCcccccceeeeCceecchHHHHHHhH
Confidence 68999999999999999999999999999763 68999999999999999999999999999999999999999999999
Q ss_pred ccccCCCEEEEEEecCCcceeeEEEeeCCCccccccceeeEEEEEeecccccccccc
Q psy11532 80 SLTLQDPVTLIVALNVNGTARGNLYLDDGQSYDYRKGNYVAVQFKYENGVLSSKGHA 136 (260)
Q Consensus 80 ~~~~~~~~~l~v~~~~~g~a~g~ly~DDG~s~~y~~g~~~~~~f~~~~~~p~~R~H~ 136 (260)
+++.++|++|.|+++..|.|+|+||.|||+|++|++|++..++|.++++..-.+.|.
T Consensus 787 ~lm~~DP~tL~IAl~~~~~A~G~lYlDDG~tf~Yq~G~~~~~~F~f~~~~~~~~~l~ 843 (915)
T KOG1066|consen 787 ELMKNDPITLFIALDSQGNANGELYLDDGETFNYQRGQYVHRRFSFSNNSLNSASLV 843 (915)
T ss_pred HhhccCCeEEEEEeCCCCcccceEEecCCcccccccccEEEEEEEeccCccccceec
Confidence 999999999999999999999999999999999999999999999998866555553
No 8
>KOG1065|consensus
Probab=99.95 E-value=1.9e-29 Score=239.46 Aligned_cols=144 Identities=37% Similarity=0.611 Sum_probs=137.0
Q ss_pred ccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHHhhHHHHHHHHHHhhcCCCceecccccccC
Q psy11532 114 RKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARYALLPYWYTLFHTQEISGAPVIRPLWYEFP 193 (260)
Q Consensus 114 ~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~~l~py~y~~~~~~~~~G~pi~rpl~~~~p 193 (260)
..+|+|.||.++..+.|++|+|+.....+++|..++. +.+..|+++-+||.++||+|+++++||..|.||+||||++||
T Consensus 555 ~~eELc~RW~q~gaF~Pf~R~hn~~~~~~qe~~~~~s-v~~a~r~~~~~ry~~lP~lytl~~~A~~sG~pV~RPlf~~fP 633 (805)
T KOG1065|consen 555 PTEELCLRWLQLGAFYPFSRNHNSPGEPRQEPYTWSS-VAEAARNALTLRYTLLPYLYTLFYRAHVSGEPVARPLFFEFP 633 (805)
T ss_pred CCHHHHHHHHHhccCCchhhccCCCCCcccChhhHHH-HHHHHHHhhhheeeehhhHHHhhhhhhhcCCcceeeeeeecC
Confidence 3567888999999999999999999999999999987 999999999999999999999999999999999999999999
Q ss_pred CChhhhhccCeeeeCCceEEEeecCCCCeEEEEEeCCCCCcEEECCCCcEEeCCeE-EEEEcCCCCCC
Q psy11532 194 QDKETFAMENQYLIGDSILVRPVTDPGATQVSVYFPRADEVWFDRDTYEAFTQTGS-VTIAVSLSKIS 260 (260)
Q Consensus 194 ~d~~~~~~~~q~~~G~~lLvaPv~~~~~~~~~vylP~~~~~W~~~~~~~~~~g~~~-~~~~~~l~~ip 260 (260)
+|+.++.+++|||+|++||||||+.+|++++++|||.| .|||..++....++.+ ++..+|+|+||
T Consensus 634 ~D~~~~~v~~qFl~G~~llvaPvl~~g~~~v~~y~P~g--~Wyd~~~~~~~~~~~~~~~~~~p~d~i~ 699 (805)
T KOG1065|consen 634 TDPATLIVSDQFLWGESLLVAPVLYQGATEVEAYLPQG--VWYDGFDGSYRVGSKWMVTYAAPLDKIP 699 (805)
T ss_pred CChhhhcccceeEeccccccccchhcCceEEEEEccCc--eeeecCCcceEeeeecccccCCchhhcc
Confidence 99999999999999999999999999999999999998 5999999999998865 59999999987
No 9
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=99.94 E-value=2.4e-26 Score=223.21 Aligned_cols=125 Identities=35% Similarity=0.650 Sum_probs=111.2
Q ss_pred CCceeEecCCeeEeeccCCCCeEEEEEecCCCCceeeCCCCeEEecCcEEEEEecCCCceeeeecCeeeecccccccccc
Q psy11532 1 MENQYLIGDSILVRPVTDPGATQVSVYFPRADEVWFDRDTYEAFTQTGSVTIAVSLSKIPTYQRGGTIIPLRERVRRASS 80 (260)
Q Consensus 1 ~~~q~m~G~~lLvaPV~~~~~~~~~vylP~g~~~W~d~~~~~~~~g~~~~~~~~~~~~ipvfvR~G~iip~~~~~~~~~~ 80 (260)
+|+|||||++||||||+++++++|+||||+| .||||+||+.++||+++++.+|+++||||||+|+|||++...++...
T Consensus 604 iddqym~G~~lLVAPV~~eg~~~r~vyLP~g--~W~d~~tg~~~~Gg~~i~~~apl~~iPvfvR~Gsiip~~~~~~~~~~ 681 (772)
T COG1501 604 LDDQYMFGDDLLVAPVVEEGQTSREVYLPEG--TWYDFWTGEEYEGGQTITVEAPLETIPVFVRAGSIIPLLENELYVGE 681 (772)
T ss_pred cccceecccceEEeeccccCcceEEEECCCc--eEEEccCCCEEeCCeeEEEecCccCCceEEecCceeecccchhhccc
Confidence 6899999999999999999999999999976 89999999999999999999999999999999999999999888665
Q ss_pred cccCCCEEEEEEecCCcceeeEEEeeCCCccccccceeeEEEEEeeccc
Q psy11532 81 LTLQDPVTLIVALNVNGTARGNLYLDDGQSYDYRKGNYVAVQFKYENGV 129 (260)
Q Consensus 81 ~~~~~~~~l~v~~~~~g~a~g~ly~DDG~s~~y~~g~~~~~~f~~~~~~ 129 (260)
... +...+.++...++ +++.+|+|||++..++++++...++++....
T Consensus 682 ~~~-~~~~~~v~~~~~~-~~~~~y~ddG~~~~~~~~~~~~~~~~~~~~~ 728 (772)
T COG1501 682 SYV-EDVAFDVFPGQDG-ASGELYDDDGESFAYEKGEYTDSKITVSNTK 728 (772)
T ss_pred ccc-CCceEEEEeccCC-ceEEEEccCCeEEEEEeeeeecceEEEEccc
Confidence 544 3566666666666 8899999999999999999988888776543
No 10
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=99.92 E-value=9.3e-25 Score=214.23 Aligned_cols=114 Identities=32% Similarity=0.640 Sum_probs=100.5
Q ss_pred CCceeEecCCeeEeec-cCCCCeEEEEEecCCCCceeeCCCCeEEecCcEEEEEecCCCceeeeecCeeeeccccccccc
Q psy11532 1 MENQYLIGDSILVRPV-TDPGATQVSVYFPRADEVWFDRDTYEAFTQTGSVTIAVSLSKIPTYQRGGTIIPLRERVRRAS 79 (260)
Q Consensus 1 ~~~q~m~G~~lLvaPV-~~~~~~~~~vylP~g~~~W~d~~~~~~~~g~~~~~~~~~~~~ipvfvR~G~iip~~~~~~~~~ 79 (260)
+++|||||++|||||| +++++++++||||+| .||||++++... +..|||||+|+|||+++..+.+.
T Consensus 538 iddQFM~G~~LLVAPVv~~~g~tsr~VYLP~G--~WyDf~t~~~~~-----------~~pplfVR~GsIIPl~~~~~~~~ 604 (978)
T PLN02763 538 VENSFLLGPLLISASTLPDQGSDNLQHVLPKG--IWQRFDFDDSHP-----------DLPLLYLQGGSIIPLGPPIQHVG 604 (978)
T ss_pred cCceEEEcCCeEEcceeccCCceEEEEECCCC--cEEecCCCCccc-----------CCccEEEeCCEEEEecccccccc
Confidence 5899999999999998 588999999999998 799999987421 34469999999999999888766
Q ss_pred ccccCCCEEEEEEecCCcceeeEEEeeCCCccccccceeeEEEEEeec
Q psy11532 80 SLTLQDPVTLIVALNVNGTARGNLYLDDGQSYDYRKGNYVAVQFKYEN 127 (260)
Q Consensus 80 ~~~~~~~~~l~v~~~~~g~a~g~ly~DDG~s~~y~~g~~~~~~f~~~~ 127 (260)
+....++++|.|+++.+|.|+|+||+|||+|++|++|++..+.|++..
T Consensus 605 e~~~~~~l~L~V~~~~~g~a~g~LYeDDG~s~~Ye~G~y~~~~f~~~~ 652 (978)
T PLN02763 605 EASLSDDLTLLIALDENGKAEGVLYEDDGDGFGYTKGDYLLTHYEAEL 652 (978)
T ss_pred ccccCCceEEEEccCCCCcEEEEEEEcCCCcccccCCcEEEEEEEEEe
Confidence 665668899999999899999999999999999999999988888764
No 11
>PF01055 Glyco_hydro_31: Glycosyl hydrolases family 31 ; InterPro: IPR000322 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 31 GH31 from CAZY comprises enzymes with several known activities; alpha-glucosidase (3.2.1.20 from EC), alpha-galactosidase (3.2.1.22 from EC); glucoamylase (3.2.1.3 from EC), sucrase-isomaltase (3.2.1.48 from EC); isomaltase (3.2.1.10 from EC); alpha-xylosidase (3.2.1 from EC); alpha-glucan lyase (4.2.2.13 from EC). Glycoside hydrolase family 31 groups a number of glycosyl hydrolases on the basis of sequence similarities [, , ] An aspartic acid has been implicated [] in the catalytic activity of sucrase, isomaltase, and lysosomal alpha-glucosidase.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3L4U_A 3L4X_A 3L4W_A 3L4V_A 3CTT_A 2QMJ_A 2QLY_A 3L4Z_A 3L4Y_A 3L4T_A ....
Probab=99.81 E-value=3.9e-20 Score=171.99 Aligned_cols=67 Identities=39% Similarity=0.823 Sum_probs=59.9
Q ss_pred CCceeEecCCeeEeeccCCCCeEEEEEecCCCCceeeCCCCeEEecCcEEEEEecCCCceeeeecCeee
Q psy11532 1 MENQYLIGDSILVRPVTDPGATQVSVYFPRADEVWFDRDTYEAFTQTGSVTIAVSLSKIPTYQRGGTII 69 (260)
Q Consensus 1 ~~~q~m~G~~lLvaPV~~~~~~~~~vylP~g~~~W~d~~~~~~~~g~~~~~~~~~~~~ipvfvR~G~ii 69 (260)
+++|||||++||||||+++|+++++||||+| .|||++|+++++||+++++.+|++++|||||+|+||
T Consensus 375 ~~~q~m~G~~lLVaPV~~~g~~~~~vylP~G--~W~d~~tg~~~~gg~~~~~~~~l~~~P~fvr~Gsii 441 (441)
T PF01055_consen 375 IDDQFMFGDDLLVAPVLEPGATSRTVYLPEG--TWYDFWTGEKYEGGQTITVEAPLDEIPVFVRAGSII 441 (441)
T ss_dssp TTSSEEETTTEEEE---STTSSEEEEEESSS--EEEETTTCCEEESSEEEEEE--TTSCEEEEETTEEE
T ss_pred cCCccccCCCEEEEeeeeecccccEEECCCC--eEEECCCCCEEECCEEEEEeCCCCccCeEEECCEeC
Confidence 5899999999999999999999999999998 799999999999999999999999999999999997
No 12
>PRK10426 alpha-glucosidase; Provisional
Probab=99.80 E-value=4.6e-20 Score=177.33 Aligned_cols=69 Identities=33% Similarity=0.595 Sum_probs=66.0
Q ss_pred CCceeEecCCeeEeeccCCCCeEEEEEecCCCCceeeCCCCeEEecCcEEEEEecCCCceeeeecCeeeecc
Q psy11532 1 MENQYLIGDSILVRPVTDPGATQVSVYFPRADEVWFDRDTYEAFTQTGSVTIAVSLSKIPTYQRGGTIIPLR 72 (260)
Q Consensus 1 ~~~q~m~G~~lLvaPV~~~~~~~~~vylP~g~~~W~d~~~~~~~~g~~~~~~~~~~~~ipvfvR~G~iip~~ 72 (260)
+++|||||++||||||+++++++++||||+| .||||+|+++|+|| ++++.+|+++||||||+|+||+..
T Consensus 558 i~~qfm~G~~LLVAPV~~~g~~~r~VYLP~g--~W~d~~tg~~~~Gg-~i~v~apl~~iPvFvR~Gsi~~~~ 626 (635)
T PRK10426 558 LKYQYLLGRDLLVAPVHEEGRTDWTVYLPED--KWVHLWTGEAFAGG-EITVEAPIGKPPVFYRAGSEWASL 626 (635)
T ss_pred CCcceEecCCeEEeeeccCCceEEEEECCCC--cEEECCCCCEEECC-EEEEeCCCCCcCEEEECCeEhHHH
Confidence 5899999999999999999999999999998 79999999999999 999999999999999999999764
No 13
>KOG1065|consensus
Probab=99.79 E-value=1.1e-19 Score=173.31 Aligned_cols=102 Identities=43% Similarity=0.772 Sum_probs=91.8
Q ss_pred CCceeEecCCeeEeeccCCCCeEEEEEecCCCCceeeCCCCeEEecCcE-EEEEecCCCceeeeecCeeeeccccccccc
Q psy11532 1 MENQYLIGDSILVRPVTDPGATQVSVYFPRADEVWFDRDTYEAFTQTGS-VTIAVSLSKIPTYQRGGTIIPLRERVRRAS 79 (260)
Q Consensus 1 ~~~q~m~G~~lLvaPV~~~~~~~~~vylP~g~~~W~d~~~~~~~~g~~~-~~~~~~~~~ipvfvR~G~iip~~~~~~~~~ 79 (260)
+++|||+|++||||||+++|++++++|||.| .|||++++....+..+ ++..+|+++||+|+|+|.|||+|+
T Consensus 641 v~~qFl~G~~llvaPvl~~g~~~v~~y~P~g--~Wyd~~~~~~~~~~~~~~~~~~p~d~i~v~~r~g~ilp~q~------ 712 (805)
T KOG1065|consen 641 VSDQFLWGESLLVAPVLYQGATEVEAYLPQG--VWYDGFDGSYRVGSKWMVTYAAPLDKIPVFLRGGYILPMQQ------ 712 (805)
T ss_pred ccceeEeccccccccchhcCceEEEEEccCc--eeeecCCcceEeeeecccccCCchhhccchhccCceeeecc------
Confidence 5899999999999999999999999999998 7999999998887766 578999999999999999999986
Q ss_pred ccccCCCEEEEEEecCCcceeeEEEeeCCCccccccceee
Q psy11532 80 SLTLQDPVTLIVALNVNGTARGNLYLDDGQSYDYRKGNYV 119 (260)
Q Consensus 80 ~~~~~~~~~l~v~~~~~g~a~g~ly~DDG~s~~y~~g~~~ 119 (260)
+.+.+++..+| |+|++|+|||++.+ .++.+.
T Consensus 713 -------~~l~~a~~~~~-a~g~l~~ddge~~~-~~~~~~ 743 (805)
T KOG1065|consen 713 -------FELLVALDENG-ASGELYWDDGETLE-AGGGYS 743 (805)
T ss_pred -------cceeeeeccCC-cceeeecCCCcchh-cCCCcE
Confidence 56778888889 99999999999998 544443
No 14
>cd06602 GH31_MGAM_SI_GAA This family includes the following three closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), and lysosomal acid alpha-glucosidase (GAA), also known as acid-maltase. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal domain found near the membrane-bound end, and a C-terminal luminal domain. Both of
Probab=99.77 E-value=8.5e-20 Score=163.93 Aligned_cols=94 Identities=34% Similarity=0.567 Sum_probs=83.3
Q ss_pred eCCCccccccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHHhhHHHHHHHHHHhhcCCCcee
Q psy11532 106 DDGQSYDYRKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARYALLPYWYTLFHTQEISGAPVI 185 (260)
Q Consensus 106 DDG~s~~y~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~~l~py~y~~~~~~~~~G~pi~ 185 (260)
|-|.-......+++.|++++....|+||+|+..+...++||.|++++.+++|+++++||+|+||||+++++++++|.||+
T Consensus 246 DigGf~g~~~~EL~~RW~Q~~~f~P~~r~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~L~PYlys~~~~a~~~G~Pi~ 325 (339)
T cd06602 246 DICGFNGDTTEELCARWMQLGAFYPFSRNHNDIGAIPQEPYVWGPSVADAARKALNIRYSLLPYLYTLFYEAHTSGTTVV 325 (339)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhhCceeeccCCCCCCCcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCchh
Confidence 43433333456778889999999999999998887889999999999999999999999999999999999999999999
Q ss_pred cccccccCCChhhh
Q psy11532 186 RPLWYEFPQDKETF 199 (260)
Q Consensus 186 rpl~~~~p~d~~~~ 199 (260)
|||+++||+|+++|
T Consensus 326 RPl~~~~p~D~~~~ 339 (339)
T cd06602 326 RPLFFEFPSDPNTY 339 (339)
T ss_pred hhhhccCCCCcccC
Confidence 99999999998764
No 15
>PRK10658 putative alpha-glucosidase; Provisional
Probab=99.73 E-value=3.6e-18 Score=164.75 Aligned_cols=63 Identities=27% Similarity=0.431 Sum_probs=60.3
Q ss_pred CCceeEecCCeeEeeccCCCCeEEEEEecCCCCceeeCCCCeEEecCcEEEEEecCCCceeeeecC
Q psy11532 1 MENQYLIGDSILVRPVTDPGATQVSVYFPRADEVWFDRDTYEAFTQTGSVTIAVSLSKIPTYQRGG 66 (260)
Q Consensus 1 ~~~q~m~G~~lLvaPV~~~~~~~~~vylP~g~~~W~d~~~~~~~~g~~~~~~~~~~~~ipvfvR~G 66 (260)
+++|||||++||||||++++. +++||||+| .||||+||++++||+++++.+|+++||||||+|
T Consensus 603 ~~~qfmlG~~lLVAPV~~~~~-~r~VYLP~G--~W~d~~tg~~~~Gg~~i~~~~~l~~iPvfvR~G 665 (665)
T PRK10658 603 LDRQYMLGDSLLVAPVFSEAG-DVEYYLPEG--RWTHLLTGEEVEGGRWHKEQHDFLSLPLLVRPN 665 (665)
T ss_pred CCCceEecCCeEEeEeecCCc-eEEEEcCCC--eEEEccCCcEEECCEEEEEeCCCccCCEEEcCC
Confidence 589999999999999999996 699999998 799999999999999999999999999999998
No 16
>cd06600 GH31_MGAM-like This family includes the following closely related glycosyl hydrolase family 31 (GH31) enzymes: maltase-glucoamylase (MGAM), sucrase-isomaltase (SI), lysosomal acid alpha-glucosidase (GAA), neutral alpha-glucosidase C (GANC), the alpha subunit of neutral alpha-glucosidase AB (GANAB), and alpha-glucosidase II. MGAM is one of the two enzymes responsible for catalyzing the last glucose-releasing step in starch digestion. SI is implicated in the digestion of dietary starch and major disaccharides such as sucrose and isomaltose, while GAA degrades glycogen in the lysosome, cleaving both alpha-1,4 and alpha-1,6 glucosidic linkages. MGAM and SI are anchored to small-intestinal brush-border epithelial cells. The absence of SI from the brush border membrane or its malfunction is associated with malabsorption disorders such as congenital sucrase-isomaltase deficiency (CSID). The domain architectures of MGAM and SI include two tandem GH31 catalytic domains, an N-terminal do
Probab=99.36 E-value=2e-13 Score=121.70 Aligned_cols=76 Identities=26% Similarity=0.365 Sum_probs=66.3
Q ss_pred eCCCccccccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHHhhHHHHHHHHHHhhcCC
Q psy11532 106 DDGQSYDYRKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARYALLPYWYTLFHTQEISG 181 (260)
Q Consensus 106 DDG~s~~y~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~~l~py~y~~~~~~~~~G 181 (260)
|-|....-...|++.|++++..+.|+||+|+......++||.|++++.+++|+++++||+|+||+||++++||++|
T Consensus 242 DiGGf~~~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~LlPYlytl~~~a~~~G 317 (317)
T cd06600 242 DIGGFQGDNSMELLVRWYQLGAFFPFYRSHKATDGKDTEPVFFPDYYKEKVREIVELRYKLLPYLYTLFLRAHEKG 317 (317)
T ss_pred ccCCCCCCCCHHHHHHHHHHhhcCceeeccCCCCCCCCCCeecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4343332345678889999999999999999888788999999999999999999999999999999999999987
No 17
>cd06603 GH31_GANC_GANAB_alpha This family includes the closely related glycosyl hydrolase family 31 (GH31) isozymes, neutral alpha-glucosidase C (GANC) and the alpha subunit of heterodimeric neutral alpha-glucosidase AB (GANAB). Initially distinguished on the basis of differences in electrophoretic mobility in starch gel, GANC and GANAB have been shown to have other differences, including those of substrate specificity. GANC and GANAB are key enzymes in glycogen metabolism that hydrolyze terminal, non-reducing 1,4-linked alpha-D-glucose residues from glycogen in the endoplasmic reticulum. The GANC/GANAB family includes the alpha-glucosidase II (ModA) from Dictyostelium discoideum as well as the alpha-glucosidase II (GLS2, or ROT2 - Reversal of TOR2 lethality protein 2) from Saccharomyces cerevisiae.
Probab=99.32 E-value=4.5e-13 Score=120.62 Aligned_cols=76 Identities=43% Similarity=0.818 Sum_probs=66.4
Q ss_pred eCCCccccccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHHhhHHHHHHHHHHhhcCC
Q psy11532 106 DDGQSYDYRKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARYALLPYWYTLFHTQEISG 181 (260)
Q Consensus 106 DDG~s~~y~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~~l~py~y~~~~~~~~~G 181 (260)
|-|......+.|++.|++++..++|+||+|+......++||.|++++.+++|+++++||+|+|||||++++|+++|
T Consensus 264 DiGGf~~~~~~EL~~RW~Q~gaf~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~LlPYlys~~~~a~~tG 339 (339)
T cd06603 264 DVGGFFGNPDEELLVRWYQAGAFYPFFRAHAHIDTKRREPWLFGEEYTSIIREAIRLRYALLPYWYTLFYEASVTG 339 (339)
T ss_pred ccCCcCCCCCHHHHHHHHHHhhcCceeecCCCCCCCCCCCeecChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 4443333345678889999999999999999888788999999999999999999999999999999999999987
No 18
>cd06604 GH31_glucosidase_II_MalA Alpha-glucosidase II (alpha-D-glucoside glucohydrolase) is a glycosyl hydrolase family 31 (GH31) enzyme, found in bacteria and plants, which has exo-alpha-1,4-glucosidase and oligo-1,6-glucosidase activities. Alpha-glucosidase II has been characterized in Bacillus thermoamyloliquefaciens where it forms a homohexamer. This family also includes the MalA alpha-glucosidase from Sulfolobus sulfataricus and the AglA alpha-glucosidase from Picrophilus torridus. MalA is part of the carbohydrate-metabolizing machinery that allows this organism to utilize carbohydrates, such as maltose, as the sole carbon and energy source.
Probab=99.29 E-value=8.3e-13 Score=118.89 Aligned_cols=68 Identities=29% Similarity=0.572 Sum_probs=63.3
Q ss_pred ccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHHhhHHHHHHHHHHhhcCC
Q psy11532 114 RKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARYALLPYWYTLFHTQEISG 181 (260)
Q Consensus 114 ~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~~l~py~y~~~~~~~~~G 181 (260)
.+.|++.|++++....|+||+|+..+...++||.|++++.+++|+++++||+|+||||+++++|+++|
T Consensus 272 ~~~EL~~RW~Q~g~f~P~~R~H~~~~~~~~ePw~~~~~~~~~~r~~~~lRy~LlPY~ysl~~~a~~tG 339 (339)
T cd06604 272 PSPELLVRWMQLGAFFPFFRNHSAKGTRDQEPWAFGEEVEEIAREAIKLRYRLLPYLYTLFWEASETG 339 (339)
T ss_pred CCHHHHHHHHHHHhccchhhccCCCCCCCCCCeecChHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 45578888999999999999999887789999999999999999999999999999999999999988
No 19
>cd06596 GH31_CPE1046 CPE1046 is an uncharacterized Clostridium perfringens protein with a glycosyl hydrolase family 31 (GH31) domain. The domain architecture of CPE1046 and its orthologs includes a C-terminal fibronectin type 3 (FN3) domain and a coagulation factor 5/8 type C domain in addition to the GH31 domain. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=98.95 E-value=6.5e-11 Score=100.95 Aligned_cols=57 Identities=21% Similarity=0.452 Sum_probs=53.1
Q ss_pred cceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHHhhHHHHH
Q psy11532 115 KGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARYALLPYWY 171 (260)
Q Consensus 115 ~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~~l~py~y 171 (260)
+.+.+.|++++..+.|++|+|+..+...++||.|++++++++|+++++||+|+||||
T Consensus 205 ~~EL~vRW~Q~gaF~P~~R~h~~~~~~~rEPW~fge~~~~i~R~~l~LRY~LlPYiY 261 (261)
T cd06596 205 SPETYTRDLQWKAFTPVLMTMSGWAANDKQPWVFGEPYTSINRDYLKLKMRLMPYIY 261 (261)
T ss_pred CHHHHHHHHHHHHhhhhhhhccCCCCCCCCCeeCCHHHHHHHHHHHHHHHHhhCccC
Confidence 457788999999999999999988888999999999999999999999999999997
No 20
>cd06593 GH31_xylosidase_YicI YicI alpha-xylosidase is a glycosyl hydrolase family 31 (GH31) enzyme that catalyzes the release of an alpha-xylosyl residue from the non-reducing end of alpha-xyloside substrates such as alpha-xylosyl fluoride and isoprimeverose. YicI forms a homohexamer (a trimer of dimers). All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The YicI family corresponds to subgroup 4 in the Ernst et al classification of GH31 enzymes.
Probab=97.88 E-value=2.7e-06 Score=75.64 Aligned_cols=58 Identities=24% Similarity=0.307 Sum_probs=48.0
Q ss_pred eCCCccccccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHHhh
Q psy11532 106 DDGQSYDYRKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARYAL 166 (260)
Q Consensus 106 DDG~s~~y~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~~l 166 (260)
|-|......+.|++.+++++..+.|++|+|+.. .++||.|++++++++|+++++||+|
T Consensus 251 DigGf~~~~~~EL~~RW~q~gaf~P~~r~h~~~---~~~Pw~~~~~~~~~~r~~~~lRy~L 308 (308)
T cd06593 251 DIGGFEGTPPPDLYKRWAQFGLLSSHSRLHGSG---YREPWEYGEEAVDVVRKFAKLKYRL 308 (308)
T ss_pred ccCCcCCCCCHHHHHHHHHhCcCCcccccCCCC---CCCCcccChHHHHHHHHHHHHHhcC
Confidence 444333334567888899999999999999875 7899999999999999999999986
No 21
>cd06598 GH31_transferase_CtsZ CtsZ (cyclic tetrasaccharide-synthesizing enzyme Z) is a bacterial 6-alpha-glucosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsY. CtsZ and CtsY both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=97.57 E-value=1.5e-05 Score=71.32 Aligned_cols=50 Identities=24% Similarity=0.305 Sum_probs=44.6
Q ss_pred ccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHHHHHHhHH
Q psy11532 114 RKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVRDALRARY 164 (260)
Q Consensus 114 ~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~~~~~~r~ 164 (260)
.+.|++.|++++..+.|+||+|+.... .++||.|++++.+++|+++++||
T Consensus 268 ~~~EL~~RW~q~g~f~P~~R~H~~~~~-~~ePw~~~~~~~~~~r~~~~lRY 317 (317)
T cd06598 268 LDPELYTRWFQYGAFDPPFRPHAQNAI-PPEPVFYSIGTKNINRENIRLRY 317 (317)
T ss_pred CCHHHHHHHHHhccCCcccccCCCCCC-CCCCCcCChHHHHHHHHHHHhhC
Confidence 456788899999999999999998764 57899999999999999999997
No 22
>cd06601 GH31_lyase_GLase GLases (alpha-1,4-glucan lyases) are glycosyl hydrolase family 31 (GH31) enzymes that degrade alpha-1,4-glucans and maltooligosaccharides via a nonhydrolytic pathway to yield 1,5-D-anhydrofructose from the nonreducing end. GLases cleave the bond between C1 and O1 of the nonreducing sugar residue of alpha-glucans to generate a monosaccharide product with a double bond between C1 and C2. This family corresponds to subgroup 2 in the Ernst et al classification of GH31 enzymes.
Probab=97.07 E-value=9.3e-05 Score=66.50 Aligned_cols=50 Identities=12% Similarity=0.141 Sum_probs=41.5
Q ss_pred cceeeEEEEEeeccccccccccccC--CCcCcc----------------cccCchhhHHHHHHHHhHH
Q psy11532 115 KGNYVAVQFKYENGVLSSKGHAHID--TRRREP----------------WLYGDATTSLVRDALRARY 164 (260)
Q Consensus 115 ~g~~~~~~f~~~~~~p~~R~H~~~~--~~~~~P----------------w~~~~~~~~~~~~~~~~r~ 164 (260)
..|++.||+++..+.|+||+|+... +..++| |.+.+++.+++|++|++||
T Consensus 265 ~~EL~~RW~Q~GaF~P~~R~H~~~~~~~~~~ep~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~i~~Ry 332 (332)
T cd06601 265 NPELLIRWYQAGFLLPWFRNHYDRKIRQKFQEPAKYFQEPYAHLIDYEQLYLYENVPEICRKYVELRY 332 (332)
T ss_pred CHHHHHHHHHHhcCCceeccCCCCccCcccCCcccccccccccccccccccccHHHHHHHHHHHHhcC
Confidence 4578889999999999999998754 467777 3444889999999999997
No 23
>cd06595 GH31_xylosidase_XylS-like This family represents an uncharacterized glycosyl hydrolase family 31 (GH31) enzyme found in bacteria and eukaryotes that is related to the XylS xylosidase of Sulfolobus solfataricus. Alpha-xylosidases catalyze the release of an alpha-xylose residue from the non-reducing end of alpha-xyloside substrates. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=95.96 E-value=0.00098 Score=58.89 Aligned_cols=51 Identities=16% Similarity=0.276 Sum_probs=40.4
Q ss_pred eCCCccc-cccceeeEEEEEeeccccccccccccCC-CcCcccccCchhhHHH
Q psy11532 106 DDGQSYD-YRKGNYVAVQFKYENGVLSSKGHAHIDT-RRREPWLYGDATTSLV 156 (260)
Q Consensus 106 DDG~s~~-y~~g~~~~~~f~~~~~~p~~R~H~~~~~-~~~~Pw~~~~~~~~~~ 156 (260)
|-|--.. ..+.|++.|++++....|+||+|+.... ..++||.|++++.+++
T Consensus 239 DiGGF~~~~~~~ELy~RW~Q~gaf~P~~R~H~~~~~~~~~ePW~~g~~~~~~~ 291 (292)
T cd06595 239 DIGGHMLGVTDPELYTRWIQFGVFSPILRLHSTKNPFNEKEPWLYEEEASKIM 291 (292)
T ss_pred ccCCCCCCCCCHHHHHHHHHHhhcccccccCCCCCCCCCccCcccCcHHHHhh
Confidence 4443333 3466888899999999999999998766 5899999999888775
No 24
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=95.04 E-value=0.004 Score=55.75 Aligned_cols=41 Identities=15% Similarity=0.302 Sum_probs=35.3
Q ss_pred ceeeEEEEEeeccccccccccccCC-CcCcccccCchhhHHH
Q psy11532 116 GNYVAVQFKYENGVLSSKGHAHIDT-RRREPWLYGDATTSLV 156 (260)
Q Consensus 116 g~~~~~~f~~~~~~p~~R~H~~~~~-~~~~Pw~~~~~~~~~~ 156 (260)
.|++.|++++....|+||+|+.... ..++||.|++++.+++
T Consensus 277 ~EL~~RW~q~gaf~P~~R~H~~~~~~~~~ePw~~g~e~~~~~ 318 (319)
T cd06591 277 RELYVRWFQFGAFCPVMRSHGTREPREINEFWSYGEEVYDIL 318 (319)
T ss_pred HHHHHHHHHHhcCccccccCCCCCCCCCCcCcCCChHHHHhh
Confidence 5778889999999999999998765 4679999999988875
No 25
>cd06589 GH31 The enzymes of glycosyl hydrolase family 31 (GH31) occur in prokaryotes, eukaryotes, and archaea with a wide range of hydrolytic activities, including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. In most cases, the pyranose moiety recognized in subsite -1 of the substrate binding site is an alpha-D-glucose, though some GH31 family members show a preference for alpha-D-xylose. Several GH31 enzymes can accommodate both glucose and xylose and different levels of discrimination between the two have been observed. Most characterized GH31 enzymes are alpha-glucosidases. In mammals, GH31 members with alpha-glucosidase activity are implicated in at least three distinct biological processes
Probab=95.02 E-value=0.0034 Score=54.62 Aligned_cols=44 Identities=16% Similarity=0.356 Sum_probs=38.2
Q ss_pred ccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHH
Q psy11532 114 RKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVR 157 (260)
Q Consensus 114 ~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~ 157 (260)
...|++.|++++..+.|++|+|+......++||.|++++++++|
T Consensus 222 ~~~EL~~RW~Q~g~F~P~~R~H~~~~~~~~epw~~~~~~~~~~r 265 (265)
T cd06589 222 PSAELYVRWFQFGAFTPIMRFHSWNSPKDTEPWAFDEEVTAIIR 265 (265)
T ss_pred CCHHHHHHHHHHhcCCcceecCCCCCCCCcCCCCcCHHHHHhhC
Confidence 45577888999999999999999988888999999998888764
No 26
>cd06597 GH31_transferase_CtsY CtsY (cyclic tetrasaccharide-synthesizing enzyme Y) is a bacterial 3-alpha-isomaltosyltransferase, first identified in Arthrobacter globiformis, that produces cyclic tetrasaccharides together with a closely related enzyme CtsZ. CtsY and CtsZ both have a glycosyl hydrolase family 31 (GH31) catalytic domain. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=93.59 E-value=0.011 Score=53.30 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=32.1
Q ss_pred ccceeeEEEEEeeccccccccccccCC-----CcCcccccCch
Q psy11532 114 RKGNYVAVQFKYENGVLSSKGHAHIDT-----RRREPWLYGDA 151 (260)
Q Consensus 114 ~~g~~~~~~f~~~~~~p~~R~H~~~~~-----~~~~Pw~~~~~ 151 (260)
.+.|++.|++++..+.|+||+|+..+. ..++||.|+++
T Consensus 287 ~~~EL~~RW~Q~g~F~P~~R~H~~~~~~~~~~~~~epw~~~~~ 329 (340)
T cd06597 287 PTAELYVRSTAMAAFVPIMQYHSEFNGHSSPNEDRTPWNIAER 329 (340)
T ss_pred CCHHHHHHHHHHhhcchhhhhccCCCCCCcCcCCccCCcccCc
Confidence 356788899999999999999998754 68999999983
No 27
>cd06599 GH31_glycosidase_Aec37 Glycosyl hydrolase family 31 (GH31) domain of a bacterial protein family represented by Escherichia coli protein Aec37. The gene encoding Aec37 (aec-37) is located within a genomic island (AGI-3) isolated from the extraintestinal avian pathogenic Escherichia coli strain BEN2908. The function of Aec37 and its orthologs is unknown; however, deletion of a region of the genome that includes aec-37 affects the assimilation of seven carbohydrates, decreases growth rate of the strain in minimal medium containing galacturonate or trehalose, and attenuates the virulence of E. coli BEN2908 in chickens. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=91.76 E-value=0.02 Score=51.22 Aligned_cols=42 Identities=14% Similarity=0.135 Sum_probs=33.3
Q ss_pred ccceeeEEEEEeeccccccccccccCC-CcCcccccCchhhHHH
Q psy11532 114 RKGNYVAVQFKYENGVLSSKGHAHIDT-RRREPWLYGDATTSLV 156 (260)
Q Consensus 114 ~~g~~~~~~f~~~~~~p~~R~H~~~~~-~~~~Pw~~~~~~~~~~ 156 (260)
.+.|++.|++++..+.|+||.|+.... ..+|||.|++ .++++
T Consensus 274 ~~~ELy~RW~Q~g~F~P~~R~H~~~~~~~~~ePw~f~~-~~~~~ 316 (317)
T cd06599 274 PEPELFVRWVQNGIFQPRFCIHSWNTDNTVTEPWMYPE-VTDYI 316 (317)
T ss_pred CCHHHHHHHHHHccCCHhhhcccCCCCCCCcCCeeccc-chhhc
Confidence 356788889999999999999987654 6799999976 45444
No 28
>cd06594 GH31_glucosidase_YihQ YihQ is a bacterial alpha-glucosidase with a conserved glycosyl hydrolase family 31 (GH31) domain that catalyzes the release of an alpha-glucosyl residue from the non-reducing end of alpha-glucoside substrates such as alpha-glucosyl fluoride. Orthologs of YihQ that have not yet been functionally characterized are present in plants and fungi. YihQ has sequence similarity to other GH31 enzymes such as CtsZ, a 6-alpha-glucosyltransferase from Bacillus globisporus, and YicI, an alpha-xylosidase from Echerichia coli. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation.
Probab=91.34 E-value=0.03 Score=50.10 Aligned_cols=43 Identities=9% Similarity=-0.048 Sum_probs=37.0
Q ss_pred ccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHH
Q psy11532 114 RKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLV 156 (260)
Q Consensus 114 ~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~ 156 (260)
...|++.|++++..+.|+||+|+...++.++||.+++++.++.
T Consensus 274 ~~~EL~~RW~Q~gaF~P~~R~H~~~~~~~~~~~~~~~~~~~~~ 316 (317)
T cd06594 274 RTEELLLRWAEMAAFTPVMRTHEGNRPDDNWQFYSDDETLRHF 316 (317)
T ss_pred CCHHHHHHHHHHhccccceecCCCCCCCCCcccccChHHHHhh
Confidence 3557888999999999999999999889999999999877653
No 29
>cd06592 GH31_glucosidase_KIAA1161 KIAA1161 is an uncharacterized Homo sapiens protein with a glycosyl hydrolase family 31 (GH31) domain that is homologous to the Escherichia coli YihQ glucosidase. Orthologs of KIA1161 are found in eukaryotes and prokaryotes. In bacteria, YihQ (along with YihO) is important for bacterial O-antigen capsule assembly and translocation. Enzymes of the GH31 family possess a wide range of different hydrolytic activities including alpha-glucosidase (glucoamylase and sucrase-isomaltase), alpha-xylosidase, 6-alpha-glucosyltransferase, 3-alpha-isomaltosyltransferase and alpha-1,4-glucan lyase. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein.
Probab=89.78 E-value=0.028 Score=49.88 Aligned_cols=37 Identities=11% Similarity=0.186 Sum_probs=31.6
Q ss_pred ccceeeEEEEEeeccccccccccccCCCcCcccccCchhhHHHH
Q psy11532 114 RKGNYVAVQFKYENGVLSSKGHAHIDTRRREPWLYGDATTSLVR 157 (260)
Q Consensus 114 ~~g~~~~~~f~~~~~~p~~R~H~~~~~~~~~Pw~~~~~~~~~~~ 157 (260)
...|+..|++++..+.|+||.| ++||.|++++++++|
T Consensus 267 ~~~EL~~RW~q~g~f~P~~R~h-------~~PW~~~~e~~~~~~ 303 (303)
T cd06592 267 PDKELYIRWLQLSAFLPVMQFS-------IAPWQYDDEVVEIAK 303 (303)
T ss_pred CCHHHHHHHHHHHHhChhhhcc-------cCCccCCHHHHHhhC
Confidence 4557788999999999999999 479999999888764
No 30
>cd00928 Cyt_c_Oxidase_VIIa Cytochrome c oxidase subunit VIIa. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of prokaryotes. It catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. The number of subunits varies from three to five in bacteria and up to 13 in mammalian mitochondria. Subunits I, II, and III of mammalian CcO are encoded within the mitochondrial genome and the remaining 10 subunits are encoded within the nuclear genome. Found only in eukaryotes, subunit VIIa has two tissue-specific isoforms that are expressed in a developmental manner. VIIa-H is expressed in heart and skeletal muscle but not smooth muscle. VIIa-L is expressed in liver and non-muscle tissues.
Probab=37.25 E-value=19 Score=23.44 Aligned_cols=11 Identities=27% Similarity=0.664 Sum_probs=9.9
Q ss_pred CCceeeeecCe
Q psy11532 57 SKIPTYQRGGT 67 (260)
Q Consensus 57 ~~ipvfvR~G~ 67 (260)
|.+|||.|+|.
T Consensus 16 ng~PV~LKGG~ 26 (55)
T cd00928 16 DGLPVHLKGGV 26 (55)
T ss_pred CCceEEecCCc
Confidence 68999999995
No 31
>COG3280 TreY Maltooligosyl trehalose synthase [Carbohydrate transport and metabolism]
Probab=32.93 E-value=32 Score=34.42 Aligned_cols=82 Identities=20% Similarity=0.309 Sum_probs=50.8
Q ss_pred HHHHHHHhHHhhHHHHHHHHHHhhcCCCceecccccccCCChhhhh----ccCeeeeCCceEEEeecCCC-----C----
Q psy11532 155 LVRDALRARYALLPYWYTLFHTQEISGAPVIRPLWYEFPQDKETFA----MENQYLIGDSILVRPVTDPG-----A---- 221 (260)
Q Consensus 155 ~~~~~~~~r~~l~py~y~~~~~~~~~G~pi~rpl~~~~p~d~~~~~----~~~q~~~G~~lLvaPv~~~~-----~---- 221 (260)
++.+++++|.+. .+....|. .+||+.+=|.-..+.. -.+|+ .+.|+|.+.-. .
T Consensus 775 v~~~aL~lR~~~--------~elF~~Gd--Y~Pl~~~G~~a~hviAFaR~~~~~~----~i~v~Prl~~a~~~~~~~~~~ 840 (889)
T COG3280 775 VTAAALRLRREH--------PELFAGGD--YLPLFAAGPAADHVIAFARGKDDQF----AITVAPRLVAALTPPGRLPQR 840 (889)
T ss_pred HHHHHHHHHHhc--------hHhhcCCC--eeeecccCchhHHHHHHhhccCCce----eEEeehHHHHhhcCCcccccc
Confidence 556666666532 23334554 6888876665554433 22333 37888875432 1
Q ss_pred -----eEEEEEeCCCCCcEEECCCCcEEeCCeEEEE
Q psy11532 222 -----TQVSVYFPRADEVWFDRDTYEAFTQTGSVTI 252 (260)
Q Consensus 222 -----~~~~vylP~~~~~W~~~~~~~~~~g~~~~~~ 252 (260)
...++-||++ + |.+..||++..|...+.+
T Consensus 841 ~~~~W~~T~l~lP~~-~-~~nvltg~~l~~~~~l~l 874 (889)
T COG3280 841 PAGAWRDTTLILPGG-S-WTNVLTGQTLSGRAHLPL 874 (889)
T ss_pred ccccccCceeecCCC-c-ccccccCcccCCCCcccH
Confidence 1357889987 4 999999999998754433
No 32
>TIGR02401 trehalose_TreY malto-oligosyltrehalose synthase. This enzyme, formally named (1-4)-alpha-D-glucan 1-alpha-D-glucosylmutase, is the TreY enzyme of the TreYZ pathway of trehalose biosynthesis, an alternative to the OtsAB pathway. Trehalose may be incorporated into more complex compounds but is best known as compatible solute. It is one of the most effective osmoprotectants, and unlike the various betaines does not require nitrogen for its synthesis.
Probab=31.39 E-value=61 Score=33.02 Aligned_cols=93 Identities=22% Similarity=0.217 Sum_probs=50.1
Q ss_pred cccCchhhHHHHHHHHhHHhhHHHHHHHHHHhhcCCCceecccccccCCChhhhhccCeeeeCCc-eEEEeecCCCC---
Q psy11532 146 WLYGDATTSLVRDALRARYALLPYWYTLFHTQEISGAPVIRPLWYEFPQDKETFAMENQYLIGDS-ILVRPVTDPGA--- 221 (260)
Q Consensus 146 w~~~~~~~~~~~~~~~~r~~l~py~y~~~~~~~~~G~pi~rpl~~~~p~d~~~~~~~~q~~~G~~-lLvaPv~~~~~--- 221 (260)
|.-+..-..++++.+++|.+.-. +| ..|. .+||...=+....+......+ -|+. +.|+|-+..+.
T Consensus 707 ~~dg~~Kl~~i~~lL~lRr~~p~----lF----~~G~--y~pL~~~G~~~~~vvaFaR~~-~~~~~vvvv~R~~~~l~~~ 775 (825)
T TIGR02401 707 LLDGLVKLAVTAAALQLRREHPE----LF----GQGD--YQPLEAGGPGAAHVIAFARGT-DRQAAIVVVTRLSLRLIQT 775 (825)
T ss_pred ccccHHHHHHHHHHHHHHHhCHH----hh----hcCC--eEEEeccCCCcCcEEEEEEec-CCcEEEEEEecchhhhhhc
Confidence 33444456778888888865211 11 3454 688877644433333322211 1222 33444332211
Q ss_pred --------eEEEEEeCCCCCcEEECCCCcEEeCCeEEEE
Q psy11532 222 --------TQVSVYFPRADEVWFDRDTYEAFTQTGSVTI 252 (260)
Q Consensus 222 --------~~~~vylP~~~~~W~~~~~~~~~~g~~~~~~ 252 (260)
....+-||.| . |.|..||+.+.+|+ +.+
T Consensus 776 ~~~~~~~W~dT~l~LP~g-~-w~d~Ltg~~~~~~~-~~l 811 (825)
T TIGR02401 776 GLPPNGFWRDTALTLPAG-A-WRDILTGETLSPGA-VPL 811 (825)
T ss_pred cCccccccCCceEecCCc-c-eeecccCccccCCc-eeH
Confidence 1235789988 4 99999999988664 443
No 33
>PRK14511 maltooligosyl trehalose synthase; Provisional
Probab=28.85 E-value=88 Score=32.11 Aligned_cols=91 Identities=24% Similarity=0.280 Sum_probs=48.5
Q ss_pred hhHHHHHHHHhHHhhHHHHHHHHHHhhcCCCceecccccccCCChhhhhccCeeeeCCc-eEEEeecCCCC------eEE
Q psy11532 152 TTSLVRDALRARYALLPYWYTLFHTQEISGAPVIRPLWYEFPQDKETFAMENQYLIGDS-ILVRPVTDPGA------TQV 224 (260)
Q Consensus 152 ~~~~~~~~~~~r~~l~py~y~~~~~~~~~G~pi~rpl~~~~p~d~~~~~~~~q~~~G~~-lLvaPv~~~~~------~~~ 224 (260)
-...+++.+++|.+. |=+ + .+|. .+||..+=+....+....... =++. +.|+|-+..+. ...
T Consensus 766 kl~~~~~lL~lRr~~-p~L---f----~~G~--y~pL~~~G~~a~~v~AFaR~~-~~~~~vvvv~R~~~~l~~~~~W~dt 834 (879)
T PRK14511 766 KLLLIARALRLRRDR-PEL---F----AGGE--YLPLEVSGPHAGHVLAFARGG-GGGRALTVAPRLPAGLLGAGGWGDT 834 (879)
T ss_pred HHHHHHHHHHHHHhC-HHH---h----hCCc--eEEEEecCCCCCcEEEEEEec-CCceEEEEeccccccccccCCcCCe
Confidence 356778888888653 111 1 2343 577765433333322211111 1222 44555444432 356
Q ss_pred EEEeCCC--CCcEEECCCCcEEeCCeEEEEEc
Q psy11532 225 SVYFPRA--DEVWFDRDTYEAFTQTGSVTIAV 254 (260)
Q Consensus 225 ~vylP~~--~~~W~~~~~~~~~~g~~~~~~~~ 254 (260)
.|-||.+ +..|.|..||+.+.+|+ +.++.
T Consensus 835 ~v~LP~~~~~~~w~d~lTG~~~~~g~-l~l~~ 865 (879)
T PRK14511 835 RLVLPEILSGGRWRDLLTGEEVSGGE-LPLAE 865 (879)
T ss_pred EEeCCCccCCCceeEeccCCcccCCc-EEHHH
Confidence 7889962 23599999999998764 54433
No 34
>PRK00364 groES co-chaperonin GroES; Reviewed
Probab=25.63 E-value=56 Score=23.64 Aligned_cols=25 Identities=24% Similarity=0.543 Sum_probs=22.1
Q ss_pred ecCCeeEeeccCCCCeEEEEEecCC
Q psy11532 7 IGDSILVRPVTDPGATQVSVYFPRA 31 (260)
Q Consensus 7 ~G~~lLvaPV~~~~~~~~~vylP~g 31 (260)
+||.+||.+.-.+..|.--++||..
T Consensus 6 l~drVLV~~~~~e~~T~gGI~Lp~~ 30 (95)
T PRK00364 6 LGDRVLVKRLEEEEKTAGGIVLPDS 30 (95)
T ss_pred cCCEEEEEEcccCccccceEEcCcc
Confidence 7899999999878888889999975
No 35
>COG0809 QueA S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) [Translation, ribosomal structure and biogenesis]
Probab=25.52 E-value=62 Score=29.16 Aligned_cols=26 Identities=19% Similarity=0.213 Sum_probs=16.6
Q ss_pred CceeEecCCeeEeeccCCCCe-EEEEEe
Q psy11532 2 ENQYLIGDSILVRPVTDPGAT-QVSVYF 28 (260)
Q Consensus 2 ~~q~m~G~~lLvaPV~~~~~~-~~~vyl 28 (260)
.+++.||++ |-|=|++.... .+.+-|
T Consensus 105 G~~i~f~~~-l~a~v~e~~~~g~~~l~F 131 (348)
T COG0809 105 GDEIYFGDG-LKATVLERLEHGLRLLEF 131 (348)
T ss_pred CCEEEeCCC-ceEEEEEecCCceEEEEE
Confidence 567888888 66667666544 444444
No 36
>PF09196 DUF1953: Domain of unknown function (DUF1953); InterPro: IPR015279 This domain is found in the Archaeal protein maltooligosyl trehalose synthase produced by Sulfolobus spp. Its function has not, as yet, been defined. ; PDB: 3HJE_A 1IV8_A.
Probab=24.62 E-value=2.1e+02 Score=18.68 Aligned_cols=42 Identities=19% Similarity=0.179 Sum_probs=32.0
Q ss_pred eeeeCCceEEEeecCCCCeEEEEEeCCCCCcEEECCCCcEEeCC
Q psy11532 204 QYLIGDSILVRPVTDPGATQVSVYFPRADEVWFDRDTYEAFTQT 247 (260)
Q Consensus 204 q~~~G~~lLvaPv~~~~~~~~~vylP~~~~~W~~~~~~~~~~g~ 247 (260)
-||-|+.+||.--+ +|.-.++.-+-.+ ..+.|.-||+.+.|.
T Consensus 13 gf~r~~kilviikt-kgs~n~~~~~e~~-~~ytdv~t~e~i~~~ 54 (66)
T PF09196_consen 13 GFIRFNKILVIIKT-KGSVNYKYKIEEG-AIYTDVITGEEIKKE 54 (66)
T ss_dssp EEEETTTEEEEEES--TTSSCEEEEECC-EEEEETTTTEEEECE
T ss_pred eEEecCEEEEEEec-ccccceeeeeccC-cEEEeeecChheeee
Confidence 58999999997644 4555578888776 459999999988875
No 37
>PRK14533 groES co-chaperonin GroES; Provisional
Probab=23.07 E-value=62 Score=23.31 Aligned_cols=26 Identities=19% Similarity=0.608 Sum_probs=22.4
Q ss_pred EecCCeeEeeccCCCCeEEEEEecCC
Q psy11532 6 LIGDSILVRPVTDPGATQVSVYFPRA 31 (260)
Q Consensus 6 m~G~~lLvaPV~~~~~~~~~vylP~g 31 (260)
-+||.+||.+.-.+..|.--++||..
T Consensus 5 Pl~DRVLVk~~~~e~~T~gGI~Lp~~ 30 (91)
T PRK14533 5 PLGERLLIKPIKEEKKTEGGIVLPDS 30 (91)
T ss_pred EcCCEEEEEEccccceecccEEeccc
Confidence 37999999999878788888999975
No 38
>PF09008 Head_binding: Head binding; InterPro: IPR009093 This entry represents the N-terminal domain of the Bacteriophage P22, Gp9, tailspike protein (TSP). The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. The tailspike protein of Salmonella bacteriophage P22 is a viral adhesion protein that mediates attachment of the viral protein to host cell-surface lipopolysaccharide. The tailspike protein displays both receptor binding and destroying properties, inactivating the receptor by endoglycosidase activity. The N-terminal, head-binding domain mediates the non-covalent attachment of the six homotrimeric tailspike molecules to the DNA injection apparatus []. The N-terminal domain of the P22 tailspike protein shows significant sequence similarity to the N-terminal domain of the Shigella phage Sf6 tailspike protein [].; GO: 0009405 pathogenesis; PDB: 2XC1_C 1LKT_D 2VFQ_A 2VFO_A 2VFN_A 2VFP_A 2VKY_B 2VFM_A 2VNL_A 2VBK_A ....
Probab=20.30 E-value=24 Score=26.23 Aligned_cols=43 Identities=12% Similarity=0.265 Sum_probs=23.0
Q ss_pred ceeeCCCCeEEecCcEEEEEecCCCceeeeec--Ceeeeccccccc
Q psy11532 34 VWFDRDTYEAFTQTGSVTIAVSLSKIPTYQRG--GTIIPLRERVRR 77 (260)
Q Consensus 34 ~W~d~~~~~~~~g~~~~~~~~~~~~ipvfvR~--G~iip~~~~~~~ 77 (260)
.|-+ ++|+-|-|.--..-.-|-+.||||+|. |+.++..+++.-
T Consensus 23 F~~~-~~GKiYIGk~~tDP~~p~NqI~Vyl~ne~G~~~~i~QPi~i 67 (114)
T PF09008_consen 23 FWAN-FNGKIYIGKAGTDPTNPGNQIPVYLENEDGSHVQIAQPIII 67 (114)
T ss_dssp SSB--TTEEEEEESTTS-TTSGGGB--EEEE-TTS-EEEE-SSEEE
T ss_pred Hhhh-cCCcEEEecCCCCCCCCCCcceEEEEcCCCCEeeccCCEEE
Confidence 4544 567777654212223355689999997 999998877554
Done!