Query psy11533
Match_columns 92
No_of_seqs 106 out of 235
Neff 4.4
Searched_HMMs 46136
Date Fri Aug 16 20:51:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11533.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11533hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1066|consensus 100.0 2.3E-34 5E-39 246.4 6.3 84 2-92 243-326 (915)
2 PF13802 Gal_mutarotas_2: Gala 99.5 1.7E-14 3.7E-19 90.2 5.3 48 2-49 21-68 (68)
3 PLN02763 hydrolase, hydrolyzin 98.4 6.4E-07 1.4E-11 79.9 6.3 51 2-53 93-144 (978)
4 COG1501 Alpha-glucosidases, fa 98.2 1.5E-06 3.1E-11 75.9 5.1 49 2-53 172-220 (772)
5 PRK10426 alpha-glucosidase; Pr 97.8 2.5E-05 5.5E-10 66.5 4.4 49 2-53 117-165 (635)
6 PRK10658 putative alpha-glucos 97.6 0.0002 4.4E-09 61.6 6.8 45 2-53 178-222 (665)
7 KOG1065|consensus 29.3 75 0.0016 29.1 3.8 47 2-51 204-252 (805)
8 PF10910 DUF2744: Protein of u 21.8 44 0.00095 23.9 0.8 21 35-55 71-91 (125)
9 PF08038 Tom7: TOM7 family; I 20.7 15 0.00032 21.6 -1.5 12 19-30 15-26 (42)
10 KOG4710|consensus 19.9 1.3E+02 0.0028 22.7 2.9 21 25-45 27-47 (170)
No 1
>KOG1066|consensus
Probab=100.00 E-value=2.3e-34 Score=246.36 Aligned_cols=84 Identities=60% Similarity=1.013 Sum_probs=79.5
Q ss_pred eeEeecccCccccCCCCccccceeEEEeecCCCeEEEEEeccCCcEEEeccCCccccCcccceeeecccCCCCCCCCCCC
Q psy11533 2 YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRSKSTLTGDVMSKIVNFVSGSGGDGGPRSS 81 (92)
Q Consensus 2 YRlyN~Dvf~Y~~~s~~~lYGsIP~l~~~~~~~~~G~fw~N~aet~Vdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (92)
|||||||||||+++|||+||||||||++|++.+++|+||+|||||||||+++.. + .+++++++.++++. ..|+
T Consensus 243 YRLyNlDVFEYe~~spmalYGSIP~m~ah~~~r~~g~fW~NAAeTWVDi~~~t~-~--~~~s~~~~~~~~s~----~~p~ 315 (915)
T KOG1066|consen 243 YRLYNLDVFEYELNSPMALYGSIPFMLAHGPNRDVGIFWLNAAETWVDIQSSTT-D--GLFSKMVDPVSGSQ----KVPQ 315 (915)
T ss_pred eeEeecceEEEecCCcchheecccEEEecCCCCceeeEEecchhheEEeecccc-c--cccccccccCCCCC----CCCC
Confidence 999999999999999999999999999999999999999999999999988743 3 58999999999998 8999
Q ss_pred ceeeEEeccCC
Q psy11533 82 TEVRFMSESGE 92 (92)
Q Consensus 82 ~~thWmSESG~ 92 (92)
++||||||||+
T Consensus 316 ~~thw~SEsGi 326 (915)
T KOG1066|consen 316 TDTHWMSESGI 326 (915)
T ss_pred ccceeeccCCc
Confidence 99999999996
No 2
>PF13802 Gal_mutarotas_2: Galactose mutarotase-like; PDB: 1XSI_F 1XSK_D 1WE5_E 2F2H_F 1XSJ_F 2G3N_C 2G3M_F 3POC_A 3MKK_A 3PHA_A ....
Probab=99.53 E-value=1.7e-14 Score=90.18 Aligned_cols=48 Identities=46% Similarity=0.769 Sum_probs=38.3
Q ss_pred eeEeecccCccccCCCCccccceeEEEeecCCCeEEEEEeccCCcEEE
Q psy11533 2 YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVD 49 (92)
Q Consensus 2 YRlyN~Dvf~Y~~~s~~~lYGsIP~l~~~~~~~~~G~fw~N~aet~Vd 49 (92)
|++||.|.+.|...+..+||++|||+++++.++..||||.|++++++|
T Consensus 21 ~~~~n~D~~~~~~~~~~~lY~siPf~~~~~s~~~yGvf~dn~~~~~~D 68 (68)
T PF13802_consen 21 YRLWNTDAFGYNGPSSDPLYKSIPFFIAHRSGKGYGVFFDNPSRTFFD 68 (68)
T ss_dssp EEE-B---TSS-GTTBS-BSEEEEEEEEEECTCEEEEEEE-SS-EEEE
T ss_pred EEEEECcCCCcCCCcCccccccEeEEEEeCCCCEEEEEEeCCCceEEC
Confidence 899999999999888889999999999999999999999999999998
No 3
>PLN02763 hydrolase, hydrolyzing O-glycosyl compounds
Probab=98.38 E-value=6.4e-07 Score=79.95 Aligned_cols=51 Identities=22% Similarity=0.374 Sum_probs=45.8
Q ss_pred eeEeecccCccccCCCCccccceeEEEeecCC-CeEEEEEeccCCcEEEeccC
Q psy11533 2 YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSH-HSVGVFWLNAAETWVDVTRS 53 (92)
Q Consensus 2 YRlyN~Dvf~Y~~~s~~~lYGsIP~l~~~~~~-~~~G~fw~N~aet~Vdi~~~ 53 (92)
|+|||.|.+.|..+.+ +||++|||++++.++ .+.||||.|++.+.+|+...
T Consensus 93 ~~lwN~D~~gy~~~~~-~LY~siPf~l~~~~~g~~yGVf~dns~~~~fDlg~~ 144 (978)
T PLN02763 93 VYTWNTDAWGYGQNTT-SLYQSHPWVFVVLPNGEALGVLADTTRRCEIDLRKE 144 (978)
T ss_pred EEEEECCCCccCCCCC-cccccEeEEEEEecCCcEEEEEEeCCCcEEEEEcCC
Confidence 7899999999998776 999999999998764 68899999999999999754
No 4
>COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=98.23 E-value=1.5e-06 Score=75.86 Aligned_cols=49 Identities=37% Similarity=0.476 Sum_probs=46.1
Q ss_pred eeEeecccCccccCCCCccccceeEEEeecCCCeEEEEEeccCCcEEEeccC
Q psy11533 2 YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRS 53 (92)
Q Consensus 2 YRlyN~Dvf~Y~~~s~~~lYGsIP~l~~~~~~~~~G~fw~N~aet~Vdi~~~ 53 (92)
||+||+|+++|...+.++||.+|||+++. +..|+||.|++.+++|++..
T Consensus 172 ~~~wn~D~~~~~~~~~~~~y~~iPf~~s~---~gyg~~~~n~~~~~fd~~~~ 220 (772)
T COG1501 172 YRLWNADAGTYTGGDYDNLYASIPFYLSS---RGYGLFVDNSAYGSFDVGSE 220 (772)
T ss_pred EEeeecCCCcccccccccccccCCEEEEc---cceEEEEECCCceEEEcCCc
Confidence 89999999999999989999999999997 68999999999999999864
No 5
>PRK10426 alpha-glucosidase; Provisional
Probab=97.79 E-value=2.5e-05 Score=66.54 Aligned_cols=49 Identities=16% Similarity=0.042 Sum_probs=41.2
Q ss_pred eeEeecccCccccCCCCccccceeEEEeecCCCeEEEEEeccCCcEEEeccC
Q psy11533 2 YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRS 53 (92)
Q Consensus 2 YRlyN~Dvf~Y~~~s~~~lYGsIP~l~~~~~~~~~G~fw~N~aet~Vdi~~~ 53 (92)
|+.+|+|...+.-.+.+++|.+|||+++.+ ..|+||.|++.+.+|+...
T Consensus 117 ~~~~~~d~~~~~gg~~~~tY~~iPf~iSs~---~ygv~~dn~~~~~fd~~~~ 165 (635)
T PRK10426 117 YVTWQADCKENAGGDYYWTYFPQPTFVSSQ---KYYCHVDNSAYMNFDFSAP 165 (635)
T ss_pred cccccccccccccCccccccceeCEEEEcC---CEEEEEcCCCcEEEEecCC
Confidence 456667777777778889999999999864 4999999999999999755
No 6
>PRK10658 putative alpha-glucosidase; Provisional
Probab=97.58 E-value=0.0002 Score=61.56 Aligned_cols=45 Identities=24% Similarity=0.284 Sum_probs=37.8
Q ss_pred eeEeecccCccccCCCCccccceeEEEeecCCCeEEEEEeccCCcEEEeccC
Q psy11533 2 YRLYNLDVFEYELDSPMSLYAAIPFVTAHNSHHSVGVFWLNAAETWVDVTRS 53 (92)
Q Consensus 2 YRlyN~Dvf~Y~~~s~~~lYGsIP~l~~~~~~~~~G~fw~N~aet~Vdi~~~ 53 (92)
++|||.|.. . +..++|++|||+++. +.-||||+|++.+.+|+++.
T Consensus 178 ~~~wn~D~~---~-~~~~~Y~~iPf~~s~---~gyGvf~dn~~~~~fd~g~~ 222 (665)
T PRK10658 178 VDIWNRDGG---T-SSEQAYKNIPFYLTN---RGYGVFVNHPQCVSFEVGSE 222 (665)
T ss_pred EEEEECCCC---C-CCccccccccEEEec---CcEEEEEcCCCceEEEEecC
Confidence 789999942 2 335899999999985 36899999999999999765
No 7
>KOG1065|consensus
Probab=29.30 E-value=75 Score=29.07 Aligned_cols=47 Identities=28% Similarity=0.512 Sum_probs=34.4
Q ss_pred eeEeecccCccccC-CCCccccceeEEEeecCCC-eEEEEEeccCCcEEEec
Q psy11533 2 YRLYNLDVFEYELD-SPMSLYAAIPFVTAHNSHH-SVGVFWLNAAETWVDVT 51 (92)
Q Consensus 2 YRlyN~Dvf~Y~~~-s~~~lYGsIP~l~~~~~~~-~~G~fw~N~aet~Vdi~ 51 (92)
+-||+-| |..+ ....|||+=||-+-....+ ..|||-+|+.-+=|-..
T Consensus 204 ~~l~~rd---~~p~~~~~NLYGshPfymcle~~~~~~GVflLnSNamEv~~~ 252 (805)
T KOG1065|consen 204 WTLFARD---YSPNLPGVNLYGSHPFYLCLEDDSGAHGVFLLNSNAMEVTLR 252 (805)
T ss_pred eeeeecc---cCCCCCcccccccccceeEeeccCCCceEEEeccCCceEEec
Confidence 3478888 5553 5678999999999887654 45899998877655443
No 8
>PF10910 DUF2744: Protein of unknown function (DUF2744); InterPro: IPR021226 This entry is represented by Mycobacteriophage D29, Gp29. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=21.80 E-value=44 Score=23.93 Aligned_cols=21 Identities=24% Similarity=0.534 Sum_probs=16.2
Q ss_pred eEEEEEeccCCcEEEeccCCc
Q psy11533 35 SVGVFWLNAAETWVDVTRSKS 55 (92)
Q Consensus 35 ~~G~fw~N~aet~Vdi~~~~~ 55 (92)
+..--|+|++.+||++...+.
T Consensus 71 rg~~h~~n~agrWV~~d~P~p 91 (125)
T PF10910_consen 71 RGPRHWYNNAGRWVPIDEPDP 91 (125)
T ss_pred CCCccccCCcceeecCCCCCC
Confidence 344568999999999987643
No 9
>PF08038 Tom7: TOM7 family; InterPro: IPR012621 This family consists of TOM7 family of mitochondrial import receptors. TOM7 forms part of the translocase of the outer mitochondrial membrane (TOM) complex and it appears to function as a modulator of the dynamics of the mitochondrial protein transport machinery by promoting the dissociation of subunits of the outer membrane translocase [].; GO: 0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity, 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=20.71 E-value=15 Score=21.59 Aligned_cols=12 Identities=25% Similarity=0.351 Sum_probs=9.4
Q ss_pred ccccceeEEEee
Q psy11533 19 SLYAAIPFVTAH 30 (92)
Q Consensus 19 ~lYGsIP~l~~~ 30 (92)
.=||-|||++-.
T Consensus 15 ~HyGfIP~Ilyl 26 (42)
T PF08038_consen 15 FHYGFIPLILYL 26 (42)
T ss_pred EEeeehHHHHHH
Confidence 458999998864
No 10
>KOG4710|consensus
Probab=19.92 E-value=1.3e+02 Score=22.66 Aligned_cols=21 Identities=29% Similarity=0.593 Sum_probs=15.7
Q ss_pred eEEEeecCCCeEEEEEeccCC
Q psy11533 25 PFVTAHNSHHSVGVFWLNAAE 45 (92)
Q Consensus 25 P~l~~~~~~~~~G~fw~N~ae 45 (92)
=++++.+--+++-+||+|+++
T Consensus 27 ~V~F~Nr~~r~vd~~Wln~~~ 47 (170)
T KOG4710|consen 27 YVLFANRTYRTVDLYWLNERE 47 (170)
T ss_pred EEEEecCCCceeeeEEECCCC
Confidence 345566556788999999886
Done!