BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy11534
         (81 letters)

Database: pdbaa 
           62,578 sequences; 14,973,337 total letters

Searching..................................................done



>pdb|2G3M|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
           Glucosidase Mala
 pdb|2G3M|B Chain B, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
           Glucosidase Mala
 pdb|2G3M|C Chain C, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
           Glucosidase Mala
 pdb|2G3M|D Chain D, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
           Glucosidase Mala
 pdb|2G3M|E Chain E, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
           Glucosidase Mala
 pdb|2G3M|F Chain F, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
           Glucosidase Mala
 pdb|2G3N|A Chain A, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
           Glucosidase Mala In Complex With
           Beta-Octyl-Glucopyranoside
 pdb|2G3N|B Chain B, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
           Glucosidase Mala In Complex With
           Beta-Octyl-Glucopyranoside
 pdb|2G3N|C Chain C, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
           Glucosidase Mala In Complex With
           Beta-Octyl-Glucopyranoside
 pdb|2G3N|D Chain D, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
           Glucosidase Mala In Complex With
           Beta-Octyl-Glucopyranoside
 pdb|2G3N|E Chain E, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
           Glucosidase Mala In Complex With
           Beta-Octyl-Glucopyranoside
 pdb|2G3N|F Chain F, Crystal Structure Of The Sulfolobus Solfataricus Alpha-
           Glucosidase Mala In Complex With
           Beta-Octyl-Glucopyranoside
          Length = 693

 Score = 65.9 bits (159), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/63 (44%), Positives = 43/63 (68%), Gaps = 2/63 (3%)

Query: 1   MLQVMATFEGLLKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSL 60
           + + MATF+G   R++++   FIL+R+G+AG QR+  IWTGDN   W  LK+ L + L L
Sbjct: 377 LYEAMATFKGF--RTSHRNEIFILSRAGYAGIQRYAFIWTGDNTPSWDDLKLQLQLVLGL 434

Query: 61  AVS 63
           ++S
Sbjct: 435 SIS 437


>pdb|3L4T|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
           With Bj2661
 pdb|3L4U|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
           With De-O-Sulfonated Kotalanol
 pdb|3L4V|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
           With Kotalanol
 pdb|3L4W|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
           With Miglitol
 pdb|3L4X|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
           With Nr4-8
 pdb|3L4Y|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
           With Nr4-8ii
 pdb|3L4Z|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
           With Salacinol
          Length = 875

 Score = 52.4 bits (124), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/42 (54%), Positives = 27/42 (64%)

Query: 19  QRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSL 60
           +R FILTRS FAGS +F A W GDN A W  L+ S+P  L  
Sbjct: 519 KRSFILTRSTFAGSGKFAAHWLGDNTATWDDLRWSIPGVLEF 560


>pdb|2QLY|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human
           Maltase- Glucoamylase
 pdb|2QMJ|A Chain A, Crystral Structure Of The N-Terminal Subunit Of Human
           Maltase- Glucoamylase In Complex With Acarbose
 pdb|3CTT|A Chain A, Crystal Complex Of N-Terminal Human Maltase-Glucoamylase
           With Casuarine
          Length = 870

 Score = 52.4 bits (124), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 23/42 (54%), Positives = 27/42 (64%)

Query: 19  QRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSL 60
           +R FILTRS FAGS +F A W GDN A W  L+ S+P  L  
Sbjct: 519 KRSFILTRSTFAGSGKFAAHWLGDNTATWDDLRWSIPGVLEF 560


>pdb|3PHA|A Chain A, The Crystal Structure Of The W169y Mutant Of
           Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
           Atcc 29174 In Complex With Acarbose
 pdb|3PHA|B Chain B, The Crystal Structure Of The W169y Mutant Of
           Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
           Atcc 29174 In Complex With Acarbose
 pdb|3PHA|C Chain C, The Crystal Structure Of The W169y Mutant Of
           Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
           Atcc 29174 In Complex With Acarbose
 pdb|3PHA|D Chain D, The Crystal Structure Of The W169y Mutant Of
           Alpha-Glucosidase (Gh31 Family) From Ruminococcus Obeum
           Atcc 29174 In Complex With Acarbose
          Length = 667

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 31/49 (63%)

Query: 12  LKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSL 60
            +R + ++R  + +RS + G  R+G IW GDN + WSH+ ++L M  SL
Sbjct: 393 FERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKMLPSL 441


>pdb|3NUK|A Chain A, The Crystal Structure Of The W169y Mutant Of
           Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
           Atcc 29174
 pdb|3NUK|B Chain B, The Crystal Structure Of The W169y Mutant Of
           Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
           Atcc 29174
          Length = 666

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 31/49 (63%)

Query: 12  LKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSL 60
            +R + ++R  + +RS + G  R+G IW GDN + WSH+ ++L M  SL
Sbjct: 393 FERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKMLPSL 441


>pdb|3M6D|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside
           Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
 pdb|3M6D|B Chain B, The Crystal Structure Of The D307a Mutant Of Glycoside
           Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
 pdb|3MKK|A Chain A, The Crystal Structure Of The D307a Mutant Of Glycoside
           Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
           In Complex With Isomaltose
 pdb|3MKK|B Chain B, The Crystal Structure Of The D307a Mutant Of Glycoside
           Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
           In Complex With Isomaltose
 pdb|3POC|A Chain A, The Crystal Structure Of The D307a Mutant Of
           Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
           Atcc 29174 In Complex With Acarbose
 pdb|3POC|B Chain B, The Crystal Structure Of The D307a Mutant Of
           Alpha-Glucosidase (Family 31) From Ruminococcus Obeum
           Atcc 29174 In Complex With Acarbose
          Length = 666

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 31/49 (63%)

Query: 12  LKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSL 60
            +R + ++R  + +RS + G  R+G IW GDN + WSH+ ++L M  SL
Sbjct: 393 FERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKMLPSL 441


>pdb|3M46|A Chain A, The Crystal Structure Of The D73a Mutant Of Glycoside
           Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
 pdb|3M46|B Chain B, The Crystal Structure Of The D73a Mutant Of Glycoside
           Hydrolase (Family 31) From Ruminococcus Obeum Atcc 29174
          Length = 666

 Score = 47.8 bits (112), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/49 (38%), Positives = 31/49 (63%)

Query: 12  LKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSL 60
            +R + ++R  + +RS + G  R+G IW GDN + WSH+ ++L M  SL
Sbjct: 393 FERIDPEKRFLMFSRSSYIGMHRYGGIWMGDNKSWWSHILLNLKMLPSL 441


>pdb|3LPO|A Chain A, Crystal Structure Of The N-Terminal Domain Of
           Sucrase-Isomal
 pdb|3LPO|B Chain B, Crystal Structure Of The N-Terminal Domain Of
           Sucrase-Isomal
 pdb|3LPO|C Chain C, Crystal Structure Of The N-Terminal Domain Of
           Sucrase-Isomal
 pdb|3LPO|D Chain D, Crystal Structure Of The N-Terminal Domain Of
           Sucrase-Isomal
 pdb|3LPP|A Chain A, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
           Kotala
 pdb|3LPP|B Chain B, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
           Kotala
 pdb|3LPP|C Chain C, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
           Kotala
 pdb|3LPP|D Chain D, Crystal Complex Of N-Terminal Sucrase-Isomaltase With
           Kotala
          Length = 898

 Score = 47.4 bits (111), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/44 (47%), Positives = 27/44 (61%)

Query: 19  QRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAV 62
           +R FILTRS FAGS R  A W GDN A W  ++ S+   L  ++
Sbjct: 548 KRSFILTRSTFAGSGRHAAHWLGDNTASWEQMEWSITGMLEFSL 591


>pdb|2XVG|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
           Cellvibrio Japonicus
 pdb|2XVK|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
           Cellvibrio Japonicus In Complex With
           5-Fluoro-Alpha-D-Xylopyranosyl Fluoride
 pdb|2XVL|A Chain A, Crystal Structure Of Alpha-Xylosidase (Gh31) From
           Cellvibrio Japonicus In Complex With Pentaerythritol
           Propoxylate (5 4 Po Oh)
          Length = 1020

 Score = 46.6 bits (109), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 1/34 (2%)

Query: 19  QRPFILTRSGFAGSQRFG-AIWTGDNMAEWSHLK 51
           +R FILTRSGF G QR G AIW+GD ++ WS +K
Sbjct: 635 KRSFILTRSGFGGIQRTGSAIWSGDIVSRWSDMK 668


>pdb|4B9Y|A Chain A, Crystal Structure Of Apo Agd31b, Alpha-transglucosylase In
           Glycoside Hydrolase Family 31
 pdb|4B9Z|A Chain A, Crystal Structure Of Agd31b, Alpha-transglucosylase,
           Complexed With Acarbose
 pdb|4BA0|A Chain A, Crystal Structure Of Agd31b, Alpha-transglucosylase,
           Complexed With 5f-alpha-glcf
          Length = 817

 Score = 45.8 bits (107), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)

Query: 20  RPFILTRSGFAGSQRFGAI-WTGDNMAEWSHLKISLPMCLSLAV 62
           RPFI+ R+GF GSQR+G I WTGD    W  L   + + L +++
Sbjct: 457 RPFIMMRAGFVGSQRYGMIPWTGDVSRTWGGLASQVELALQMSL 500


>pdb|3NSX|A Chain A, The Crystal Structure Of The The Crystal Structure Of The
           D420a Mutant Of The Alpha-Glucosidase (Family 31) From
           Ruminococcus Obeum Atcc 29174
 pdb|3NSX|B Chain B, The Crystal Structure Of The The Crystal Structure Of The
           D420a Mutant Of The Alpha-Glucosidase (Family 31) From
           Ruminococcus Obeum Atcc 29174
          Length = 666

 Score = 44.7 bits (104), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 30/49 (61%)

Query: 12  LKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSL 60
            +R + ++R  + +RS + G  R+G IW G N + WSH+ ++L M  SL
Sbjct: 393 FERIDPEKRFLMFSRSSYIGMHRYGGIWMGANKSWWSHILLNLKMLPSL 441


>pdb|3N04|A Chain A, The Crystal Structure Of The Alpha-Glucosidase (Family 31)
           From Ruminococcus Obeum Atcc 29174
 pdb|3N04|B Chain B, The Crystal Structure Of The Alpha-Glucosidase (Family 31)
           From Ruminococcus Obeum Atcc 29174
          Length = 666

 Score = 44.3 bits (103), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 29/49 (59%)

Query: 12  LKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSL 60
            +R + ++R    +RS + G  R+G IW GDN + WSH+ ++L    SL
Sbjct: 393 FERIDPEKRFLXFSRSSYIGXHRYGGIWXGDNKSWWSHILLNLKXLPSL 441


>pdb|3TON|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
           Maltase- Glucoamylase
 pdb|3TON|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
           Maltase- Glucoamylase
 pdb|3TOP|A Chain A, Crystral Structure Of The C-Terminal Subunit Of Human
           Maltase- Glucoamylase In Complex With Acarbose
 pdb|3TOP|B Chain B, Crystral Structure Of The C-Terminal Subunit Of Human
           Maltase- Glucoamylase In Complex With Acarbose
          Length = 908

 Score = 40.8 bits (94), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 3   QVMATFEGLLKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISL 54
           Q   T+E + + +   QR  ++TRS F  S R+   W GDN A W  LK S+
Sbjct: 538 QTRPTYEAVQEVTG--QRGVVITRSTFPSSGRWAGHWLGDNTAAWDQLKKSI 587


>pdb|2X2H|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
           Alpha- 1,4-Glucan Lyase
 pdb|2X2H|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
           Alpha- 1,4-Glucan Lyase
 pdb|2X2H|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
           Alpha- 1,4-Glucan Lyase
 pdb|2X2H|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
           Alpha- 1,4-Glucan Lyase
 pdb|2X2I|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
           Alpha- 1,4-Glucan Lyase With Acarbose
 pdb|2X2I|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
           Alpha- 1,4-Glucan Lyase With Acarbose
 pdb|2X2I|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
           Alpha- 1,4-Glucan Lyase With Acarbose
 pdb|2X2I|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
           Alpha- 1,4-Glucan Lyase With Acarbose
 pdb|2X2J|A Chain A, Crystal Structure Of The Gracilariopsis Lemaneiformis
           Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
 pdb|2X2J|B Chain B, Crystal Structure Of The Gracilariopsis Lemaneiformis
           Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
 pdb|2X2J|C Chain C, Crystal Structure Of The Gracilariopsis Lemaneiformis
           Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
 pdb|2X2J|D Chain D, Crystal Structure Of The Gracilariopsis Lemaneiformis
           Alpha- 1,4-Glucan Lyase With Deoxynojirimycin
          Length = 1027

 Score = 39.3 bits (90), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 30/45 (66%)

Query: 19  QRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVS 63
           +R +I++R G+ G+Q FG +W GDN    +++++ +   +++ +S
Sbjct: 631 RRSYIISRGGYIGNQHFGGMWVGDNSTTSNYIQMMIANNINMNMS 675


>pdb|2F2H|A Chain A, Structure Of The Yici Thiosugar Michaelis Complex
 pdb|2F2H|B Chain B, Structure Of The Yici Thiosugar Michaelis Complex
 pdb|2F2H|C Chain C, Structure Of The Yici Thiosugar Michaelis Complex
 pdb|2F2H|D Chain D, Structure Of The Yici Thiosugar Michaelis Complex
 pdb|2F2H|E Chain E, Structure Of The Yici Thiosugar Michaelis Complex
 pdb|2F2H|F Chain F, Structure Of The Yici Thiosugar Michaelis Complex
          Length = 773

 Score = 30.4 bits (67), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 11  LLKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVS 63
           +LK +  ++   +  RS   G+Q+F   W GD  A +  +  SL   LS+ +S
Sbjct: 451 VLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLS 503


>pdb|1XSI|A Chain A, Structure Of A Family 31 Alpha Glycosidase
 pdb|1XSI|B Chain B, Structure Of A Family 31 Alpha Glycosidase
 pdb|1XSI|C Chain C, Structure Of A Family 31 Alpha Glycosidase
 pdb|1XSI|D Chain D, Structure Of A Family 31 Alpha Glycosidase
 pdb|1XSI|E Chain E, Structure Of A Family 31 Alpha Glycosidase
 pdb|1XSI|F Chain F, Structure Of A Family 31 Alpha Glycosidase
 pdb|1XSJ|A Chain A, Structure Of A Family 31 Alpha Glycosidase
 pdb|1XSJ|B Chain B, Structure Of A Family 31 Alpha Glycosidase
 pdb|1XSJ|C Chain C, Structure Of A Family 31 Alpha Glycosidase
 pdb|1XSJ|D Chain D, Structure Of A Family 31 Alpha Glycosidase
 pdb|1XSJ|E Chain E, Structure Of A Family 31 Alpha Glycosidase
 pdb|1XSJ|F Chain F, Structure Of A Family 31 Alpha Glycosidase
 pdb|1XSK|A Chain A, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
           Intermediate
 pdb|1XSK|B Chain B, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
           Intermediate
 pdb|1XSK|C Chain C, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
           Intermediate
 pdb|1XSK|D Chain D, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
           Intermediate
 pdb|1XSK|E Chain E, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
           Intermediate
 pdb|1XSK|F Chain F, Structure Of A Family 31 Alpha Glycosidase Glycosyl-Enzyme
           Intermediate
          Length = 778

 Score = 30.4 bits (67), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 11  LLKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVS 63
           +LK +  ++   +  RS   G+Q+F   W GD  A +  +  SL   LS+ +S
Sbjct: 451 VLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLS 503


>pdb|1WE5|A Chain A, Crystal Structure Of Alpha-Xylosidase From Escherichia
           Coli
 pdb|1WE5|B Chain B, Crystal Structure Of Alpha-Xylosidase From Escherichia
           Coli
 pdb|1WE5|C Chain C, Crystal Structure Of Alpha-Xylosidase From Escherichia
           Coli
 pdb|1WE5|D Chain D, Crystal Structure Of Alpha-Xylosidase From Escherichia
           Coli
 pdb|1WE5|E Chain E, Crystal Structure Of Alpha-Xylosidase From Escherichia
           Coli
 pdb|1WE5|F Chain F, Crystal Structure Of Alpha-Xylosidase From Escherichia
           Coli
          Length = 772

 Score = 29.3 bits (64), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 11  LLKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVS 63
           +LK +  ++   +  RS   G+Q+F   W GD  A +     SL   LS+ +S
Sbjct: 451 VLKDTVGEEEAVLFARSASVGAQKFPVHWGGDCYANYESXAESLRGGLSIGLS 503


  Database: pdbaa
    Posted date:  Mar 3, 2013 10:34 PM
  Number of letters in database: 14,973,337
  Number of sequences in database:  62,578
  
Lambda     K      H
   0.322    0.132    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,179,671
Number of Sequences: 62578
Number of extensions: 66005
Number of successful extensions: 93
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75
Number of HSP's gapped (non-prelim): 17
length of query: 81
length of database: 14,973,337
effective HSP length: 50
effective length of query: 31
effective length of database: 11,844,437
effective search space: 367177547
effective search space used: 367177547
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 45 (21.9 bits)