Query psy11534
Match_columns 81
No_of_seqs 101 out of 1036
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 20:53:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11534.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11534hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nsx_A Alpha-glucosidase; stru 100.0 6.3E-29 2.2E-33 193.8 7.0 77 1-80 383-459 (666)
2 3l4y_A Maltase-glucoamylase, i 99.9 2E-28 6.7E-33 195.7 6.9 77 1-80 502-578 (875)
3 3lpp_A Sucrase-isomaltase; gly 99.9 3.2E-28 1.1E-32 194.9 6.9 77 1-80 531-607 (898)
4 3top_A Maltase-glucoamylase, i 99.9 5E-28 1.7E-32 194.0 6.6 76 1-80 536-611 (908)
5 4ba0_A Alpha-glucosidase, puta 99.9 1.9E-27 6.6E-32 188.8 7.2 77 1-80 439-516 (817)
6 2g3m_A Maltase, alpha-glucosid 99.9 3.5E-27 1.2E-31 184.5 6.6 76 1-80 377-452 (693)
7 2f2h_A Putative family 31 gluc 99.9 2.3E-26 8E-31 181.7 6.4 77 1-80 442-518 (773)
8 2xvl_A Alpha-xylosidase, putat 99.9 7.5E-26 2.5E-30 183.0 7.4 75 1-78 618-693 (1020)
9 2x2h_A Alpha-1,4-glucan lyase 99.9 1.4E-24 4.8E-29 175.7 5.5 73 4-79 612-689 (1027)
10 2xn2_A Alpha-galactosidase; hy 95.1 0.022 7.4E-07 45.0 4.4 55 3-60 507-568 (732)
11 3iht_A S-adenosyl-L-methionine 82.1 1.3 4.6E-05 29.5 3.4 57 7-75 54-117 (174)
12 2yfo_A Alpha-galactosidase-suc 67.7 4.3 0.00015 32.0 3.3 49 4-53 496-551 (720)
13 3mi6_A Alpha-galactosidase; NE 57.2 7 0.00024 31.2 2.8 51 3-54 504-561 (745)
14 2atm_A Hyaluronoglucosaminidas 52.3 12 0.00041 27.2 3.2 43 20-71 256-299 (331)
15 3cc1_A BH1870 protein, putativ 49.1 46 0.0016 24.3 6.0 52 5-60 200-260 (433)
16 3hg3_A Alpha-galactosidase A; 45.2 20 0.0007 26.4 3.5 37 19-56 164-214 (404)
17 2pe4_A Hyaluronidase-1; hyalur 39.9 31 0.0011 25.9 3.8 43 20-71 263-305 (424)
18 3ia4_A Dihydrofolate reductase 36.0 13 0.00046 23.7 1.2 26 2-28 42-67 (162)
19 3tq8_A Dihydrofolate reductase 33.7 13 0.00045 24.3 0.9 26 2-28 42-67 (178)
20 3s9u_A Dihydrofolate reductase 33.5 16 0.00053 23.5 1.2 26 2-28 45-70 (165)
21 3dau_A Dihydrofolate reductase 30.6 19 0.00064 23.0 1.2 26 2-28 41-66 (159)
22 1szn_A Alpha-galactosidase; (b 28.3 96 0.0033 22.5 4.8 49 5-56 181-240 (417)
23 1x67_A Drebrin-like protein; c 27.2 82 0.0028 19.3 3.8 44 8-51 57-103 (146)
24 1fcq_A Hyaluronoglucosaminidas 25.9 32 0.0011 25.2 1.8 44 20-71 261-304 (350)
25 3dfr_A Dihydrofolate reductase 25.9 14 0.00047 23.5 -0.1 26 2-28 40-66 (162)
26 3hrd_A Nicotinate dehydrogenas 25.3 40 0.0014 24.6 2.3 41 38-79 194-241 (425)
27 2w9h_A DHFR, dihydrofolate red 23.8 21 0.00073 22.3 0.5 26 2-28 42-67 (159)
28 3bsu_A Ribonuclease H1, RNAse 22.5 70 0.0024 16.7 2.4 25 31-55 1-28 (53)
29 1juv_A DHFR, dihydrofolate red 22.3 15 0.00052 24.0 -0.4 25 2-27 50-74 (193)
No 1
>3nsx_A Alpha-glucosidase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, acarbose; 1.57A {Ruminococcus obeum} PDB: 3ffj_A 3n04_A 3pha_A* 3nuk_A 3nxm_A* 3m46_A 3mkk_A* 3m6d_A* 3nqq_A* 3poc_A*
Probab=99.95 E-value=6.3e-29 Score=193.83 Aligned_cols=77 Identities=26% Similarity=0.413 Sum_probs=72.3
Q ss_pred ChHhHHHHHHHHhhcCCCCCceEEeccCCcCccccceeecCCCcCChHHHHHHHHHHHhccccCCccccccCCCCcccCC
Q psy11534 1 MLQVMATFEGLLKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFVVGIGAAAGS 80 (81)
Q Consensus 1 ~~~~ka~~e~l~~~~~~~~R~filsRs~~aGsqry~~~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsDiG~~gf~g~ 80 (81)
++++||+||++++..++ +||||||||+|+|+|||+++|+|||.++|++|+.+|+++|+++|+|+|+||+|| |||.|.
T Consensus 383 ~~~~~at~e~l~~~~~~-~RpfilsRS~~aGsqry~~~W~GDn~s~W~~L~~sI~~~L~~~l~G~p~~g~DI--GGF~g~ 459 (666)
T 3nsx_A 383 YNMTRAAGEAFERIDPE-KRFLMFSRSSYIGMHRYGGIWMGANKSWWSHILLNLKMLPSLNMCGFMYTGADL--GGFGDD 459 (666)
T ss_dssp HHHHHHHHHHHHHHCTT-CCCEEEESSEETTGGGTCEEEECCSSCCTHHHHHHHHHHHHHHHTTCCSEEECC--CCCBTC
T ss_pred cchhHHHHHHHHhhCCC-ceEEEEeccceeceeecCceecCCCccHHHHHHHhhhhccccccceeeeecccc--CcCCCC
Confidence 36899999999999887 599999999999999999999999999999999999999999999999999999 577664
No 2
>3l4y_A Maltase-glucoamylase, intestinal; glycoside hydrolase family 31, cell membrane, disulfide bond, glycoprotein, glycosidase, hydrolase, membrane; HET: NR4 NAG; 1.80A {Homo sapiens} PDB: 3l4u_A* 3l4v_A* 3l4w_A* 3l4x_A* 3l4t_A* 3l4z_A* 2qmj_A* 2qly_A* 3ctt_A*
Probab=99.95 E-value=2e-28 Score=195.72 Aligned_cols=77 Identities=35% Similarity=0.446 Sum_probs=72.5
Q ss_pred ChHhHHHHHHHHhhcCCCCCceEEeccCCcCccccceeecCCCcCChHHHHHHHHHHHhccccCCccccccCCCCcccCC
Q psy11534 1 MLQVMATFEGLLKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFVVGIGAAAGS 80 (81)
Q Consensus 1 ~~~~ka~~e~l~~~~~~~~R~filsRs~~aGsqry~~~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsDiG~~gf~g~ 80 (81)
++++||+||++++..++ +||||||||+|+|+|||+++|+|||.++|++|+.+|+++|+++|+|+||||+|| |||.|.
T Consensus 502 ~~~~~at~e~l~~~~~~-kRpfilsRS~~aGsqry~~~WsGDn~s~W~~L~~sI~~~L~~~lsG~p~~g~DI--GGF~g~ 578 (875)
T 3l4y_A 502 YSMAVATAEAAKTVFPN-KRSFILTRSTFAGSGKFAAHWLGDNTATWDDLRWSIPGVLEFNLFGIPMVGPDI--CGFALD 578 (875)
T ss_dssp HHHHHHHHHHHHHHSTT-BCCCEEESSCCTTGGGTCEEECCSCBSSHHHHHHHHHHHHHHHHTTCCSEECEE--TCSBSC
T ss_pred HHHHHHHHHHHHHhcCC-CceEEEeccccCCCCccccccCCchhcCHHHHHHHHHHHHHHHhcCCCeecCCc--CCcCCC
Confidence 36899999999998887 599999999999999999999999999999999999999999999999999999 588764
No 3
>3lpp_A Sucrase-isomaltase; glycoside hydrolase family 31, alpha-glucosidase membrane, disease mutation, disulfide bond, glycoprotein, glycosidase; HET: NAG BMA MAN KTL; 2.15A {Homo sapiens} PDB: 3lpo_A*
Probab=99.95 E-value=3.2e-28 Score=194.88 Aligned_cols=77 Identities=31% Similarity=0.416 Sum_probs=72.4
Q ss_pred ChHhHHHHHHHHhhcCCCCCceEEeccCCcCccccceeecCCCcCChHHHHHHHHHHHhccccCCccccccCCCCcccCC
Q psy11534 1 MLQVMATFEGLLKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFVVGIGAAAGS 80 (81)
Q Consensus 1 ~~~~ka~~e~l~~~~~~~~R~filsRs~~aGsqry~~~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsDiG~~gf~g~ 80 (81)
++++||+||++++..++ +||||||||+|+|+|||+++|+|||.++|++|+.+|+++|+++|+|+||||+|| |||.|.
T Consensus 531 ~~~~~at~e~l~~~~~~-~RpfilsRS~~aGsqRy~~~WsGDn~s~W~~L~~sI~~~L~~~lsG~p~~g~DI--GGF~g~ 607 (898)
T 3lpp_A 531 YSMAIATEQAVQKVFPN-KRSFILTRSTFAGSGRHAAHWLGDNTASWEQMEWSITGMLEFSLFGIPLVGADI--CGFVAE 607 (898)
T ss_dssp HHHHHHHHHHHHHHSTT-BCCCEEESCCCTTGGGTCEEECCSCBSSHHHHHHHHHHHHHHHHTTCCSEECEE--TCSBSC
T ss_pred HHHHHHHHHHHHHhccC-CCccEEEecccCCCCccccccCCcccCCHHHHHHHHHHHHHHhhcCCCcccCCC--cCCCCC
Confidence 36899999999998777 599999999999999999999999999999999999999999999999999999 578764
No 4
>3top_A Maltase-glucoamylase, intestinal; membrane, hydrolase-hydrolase inhibitor complex; HET: ACR; 2.88A {Homo sapiens} PDB: 3ton_A*
Probab=99.94 E-value=5e-28 Score=194.01 Aligned_cols=76 Identities=26% Similarity=0.367 Sum_probs=71.3
Q ss_pred ChHhHHHHHHHHhhcCCCCCceEEeccCCcCccccceeecCCCcCChHHHHHHHHHHHhccccCCccccccCCCCcccCC
Q psy11534 1 MLQVMATFEGLLKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFVVGIGAAAGS 80 (81)
Q Consensus 1 ~~~~ka~~e~l~~~~~~~~R~filsRs~~aGsqry~~~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsDiG~~gf~g~ 80 (81)
++++||+||+++++ ++ +||||||||+|+|+|||+++|+|||.++|++|+.+|+++|+++|+|+||||+|| |||.|.
T Consensus 536 ~~~~~atye~l~~~-~~-~RpfilsRS~~aGsqry~~~WtGDn~s~W~~L~~si~~~L~~~lsG~p~~g~DI--gGF~g~ 611 (908)
T 3top_A 536 WSQTRPTYEAVQEV-TG-QRGVVITRSTFPSSGRWAGHWLGDNTAAWDQLKKSIIGMMEFSLFGISYTGADI--CGFFQD 611 (908)
T ss_dssp HHHHHHHHHHHHHH-HS-SCCCEEESSCCTTGGGTCEEECCCCBSSTHHHHHHHHHHHHHHHHTCCSEECBT--TCSBSC
T ss_pred HHHHHHHHHHHHhc-cC-CCceEEEeccccCCCCccceeCCchhhhHHHHHHHHHHHHHHhhcCCccccCcc--CccCCC
Confidence 37899999999998 66 599999999999999999999999999999999999999999999999999999 577764
No 5
>4ba0_A Alpha-glucosidase, putative, ADG31B; hydrolase; HET: 5GF PGE ARG; 1.85A {Cellvibrio japonicus} PDB: 4b9z_A* 4b9y_A*
Probab=99.94 E-value=1.9e-27 Score=188.81 Aligned_cols=77 Identities=29% Similarity=0.478 Sum_probs=72.2
Q ss_pred ChHhHHHHHHHHhhcCCCCCceEEeccCCcCccccce-eecCCCcCChHHHHHHHHHHHhccccCCccccccCCCCcccC
Q psy11534 1 MLQVMATFEGLLKRSNYQQRPFILTRSGFAGSQRFGA-IWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFVVGIGAAAG 79 (81)
Q Consensus 1 ~~~~ka~~e~l~~~~~~~~R~filsRs~~aGsqry~~-~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsDiG~~gf~g 79 (81)
++|++|+||++++..++ +||||++||+|+|+|||++ +|+|||.++|++|+.||+++|+++|+|+||||+|| |||.|
T Consensus 439 ~~~~~a~~e~~~~~~~~-~RpfilsRs~~aGsqry~~~~WsGDn~s~W~~L~~~i~~~L~~~lsG~p~~g~DI--GGF~g 515 (817)
T 4ba0_A 439 HRWAEMLYQQQLDQFPE-LRPFIMMRAGFVGSQRYGMIPWTGDVSRTWGGLASQVELALQMSLLGFGYIHSDL--GGFAD 515 (817)
T ss_dssp HHHHHHHHHHHHHHCTT-SCCCEEESCCCTTGGGGTEEEBCCSCBSSHHHHHTHHHHHHHHHHTTCTTCBCCB--TCCBC
T ss_pred HHHHHHHHHHHHHhcCC-CccEEEECcccCccccCCccCcCCcccCCHHHHHHHHHHHHHHhhcCCCccccCc--CCCCC
Confidence 36899999999998876 5999999999999999997 79999999999999999999999999999999999 68877
Q ss_pred C
Q psy11534 80 S 80 (81)
Q Consensus 80 ~ 80 (81)
.
T Consensus 516 ~ 516 (817)
T 4ba0_A 516 G 516 (817)
T ss_dssp C
T ss_pred C
Confidence 4
No 6
>2g3m_A Maltase, alpha-glucosidase; hydrolase, glycoside hydrolase family 31, multidomain protein, (beta/alpha)8 barrel, retaining mechanism; 2.55A {Sulfolobus solfataricus} PDB: 2g3n_A*
Probab=99.94 E-value=3.5e-27 Score=184.49 Aligned_cols=76 Identities=38% Similarity=0.729 Sum_probs=71.2
Q ss_pred ChHhHHHHHHHHhhcCCCCCceEEeccCCcCccccceeecCCCcCChHHHHHHHHHHHhccccCCccccccCCCCcccCC
Q psy11534 1 MLQVMATFEGLLKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFVVGIGAAAGS 80 (81)
Q Consensus 1 ~~~~ka~~e~l~~~~~~~~R~filsRs~~aGsqry~~~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsDiG~~gf~g~ 80 (81)
++++||+||++++..+ +||||++||+|+|+|||+++|+|||.++|++|+.||+++|+++|+|+|+||+|| |||.|.
T Consensus 377 ~~~~~a~~e~l~~~~~--~RpfilsRS~~aGsqry~~~W~GD~~s~W~~L~~~i~~~L~~~l~G~p~~g~DI--GGF~g~ 452 (693)
T 2g3m_A 377 LYEAMATFKGFRTSHR--NEIFILSRAGYAGIQRYAFIWTGDNTPSWDDLKLQLQLVLGLSISGVPFVGCDI--GGFQGR 452 (693)
T ss_dssp HHHHHHHHHHHHHTTC--CSCCEEESCEETTGGGTCEEECCSCCCSHHHHHHHHHHHHHHHTTTCCSEECEE--TCSCCS
T ss_pred HHHHHHHHHHHHhhCC--CCcEEEEccccCCCCCCccccCCCcccCHHHHHHHHHHHHHHHhcCCCcccCCC--CCCCCC
Confidence 3689999999999876 499999999999999999999999999999999999999999999999999999 678764
No 7
>2f2h_A Putative family 31 glucosidase YICI; BETA8alpha8 barrel, hydrolase; HET: MPO XTG; 1.95A {Escherichia coli} SCOP: b.150.1.1 b.30.5.11 b.71.1.4 c.1.8.13 PDB: 1xsj_A 1xsi_A 1xsk_A* 1we5_A*
Probab=99.93 E-value=2.3e-26 Score=181.67 Aligned_cols=77 Identities=21% Similarity=0.277 Sum_probs=71.8
Q ss_pred ChHhHHHHHHHHhhcCCCCCceEEeccCCcCccccceeecCCCcCChHHHHHHHHHHHhccccCCccccccCCCCcccCC
Q psy11534 1 MLQVMATFEGLLKRSNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFVVGIGAAAGS 80 (81)
Q Consensus 1 ~~~~ka~~e~l~~~~~~~~R~filsRs~~aGsqry~~~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsDiG~~gf~g~ 80 (81)
+++++|+||++++..++ +|||+|+||+|+|+|||+++|+|||.++|++|+.||+++|++++||+||||+|| |||.|.
T Consensus 442 ~~~~~a~~e~l~~~~~~-~rp~ilsRS~~aGsqRy~~~WsGDn~s~W~~L~~si~~~L~~~lsG~p~~g~DI--GGF~g~ 518 (773)
T 2f2h_A 442 YIYNELVWNVLKDTVGE-EEAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDI--GGFENT 518 (773)
T ss_dssp HHHHHHHHHHHHTTTCG-GGCCEEESCBCTTGGGSCCEECCCCCSSHHHHHHHHHHHHHHHTTTCCCEEEET--TCSSSC
T ss_pred HHHHHHHHHHHHHhcCC-CCceEEeecccCccCCCceEeCCCCcchHHHHHHHHHHHHhhhccCCccccCCc--CCcCCC
Confidence 36899999999998765 599999999999999999999999999999999999999999999999999999 688763
No 8
>2xvl_A Alpha-xylosidase, putative, XYL31A; hydrolase, glycosyl hydrolase family 31, (beta/alpha)8 barre; HET: PXN; 2.30A {Cellvibrio japonicus} PDB: 2xvg_A* 2xvk_A*
Probab=99.92 E-value=7.5e-26 Score=183.05 Aligned_cols=75 Identities=32% Similarity=0.611 Sum_probs=70.7
Q ss_pred ChHhHHHHHHHHhhcCCCCCceEEeccCCcCccccce-eecCCCcCChHHHHHHHHHHHhccccCCccccccCCCCccc
Q psy11534 1 MLQVMATFEGLLKRSNYQQRPFILTRSGFAGSQRFGA-IWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFVVGIGAAA 78 (81)
Q Consensus 1 ~~~~ka~~e~l~~~~~~~~R~filsRs~~aGsqry~~-~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsDiG~~gf~ 78 (81)
++++||+||++++..++ +|||||+||+|+|+|||++ +|+|||.++|++|+.||+++|+++|+|+||||+|| |||.
T Consensus 618 ~~~~~atye~l~~~~~~-kRpfilsRS~~aGsQRy~~~~WsGDn~ssW~~L~~sI~~~L~~glsGip~~g~DI--GGF~ 693 (1020)
T 2xvl_A 618 VPHAEGVYQGELATDGD-KRSFILTRSGFGGIQRTGSAIWSGDIVSRWSDMKDQIAAGIGTNLAGVTNWTFDI--GGFT 693 (1020)
T ss_dssp HHHHHHHHHHHHHHCTT-SCCCEEESCCCTTGGGGTEEEECCSCBSSHHHHHHHHHHHHHHHHTTCCCEECCB--TCSB
T ss_pred HHHHHHHHHHHHHhcCC-CceEEEEecccCCCCcCceeeeCCccCchHHHHHHHHHHHHHHhhcCCceeeccc--CCCc
Confidence 36899999999998876 5999999999999999999 99999999999999999999999999999999999 5775
No 9
>2x2h_A Alpha-1,4-glucan lyase isozyme 1; anhydrofructose pathway, glycoside hydrolase family 3 starch binding domain; 2.06A {Gracilariopsis lemaneiformis} PDB: 2x2i_A* 2x2j_A*
Probab=99.90 E-value=1.4e-24 Score=175.70 Aligned_cols=73 Identities=23% Similarity=0.547 Sum_probs=63.7
Q ss_pred hHHH-HHHHHhh----cCCCCCceEEeccCCcCccccceeecCCCcCChHHHHHHHHHHHhccccCCccccccCCCCccc
Q psy11534 4 VMAT-FEGLLKR----SNYQQRPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFVVGIGAAA 78 (81)
Q Consensus 4 ~ka~-~e~l~~~----~~~~~R~filsRs~~aGsqry~~~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsDiG~~gf~ 78 (81)
.+++ +|++++. .++ +||||||||+|+|+|||+++|+|||.++|++|+.+|+++|+++|||+||||+|| |||.
T Consensus 612 ~~at~~eg~~~~~~~l~~~-kRpfilsRs~~aGsqRy~~~WsGDn~s~W~~L~~si~~~L~~~lsG~p~~g~DI--gGF~ 688 (1027)
T 2x2h_A 612 CESTRKEGIVENADTLTKF-RRSYIISRGGYIGNQHFGGMWVGDNSTTSNYIQMMIANNINMNMSCLPLVGSDI--GGFT 688 (1027)
T ss_dssp HHHHHHHTTTTTGGGCCSC-SCCCEEESCEETTGGGTCEEECCSCCSSHHHHHHHHHHHHHHHHTTCCSEECCT--TCSS
T ss_pred HHHHHHHHhhhhhhhcccC-cceEEEeccccCccCCcccccCCcccccchhHHHHHHHHHHHHhcCCCcccCCc--CccC
Confidence 4455 4666432 355 599999999999999999999999999999999999999999999999999999 5776
Q ss_pred C
Q psy11534 79 G 79 (81)
Q Consensus 79 g 79 (81)
|
T Consensus 689 g 689 (1027)
T 2x2h_A 689 S 689 (1027)
T ss_dssp C
T ss_pred C
Confidence 6
No 10
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=95.14 E-value=0.022 Score=44.99 Aligned_cols=55 Identities=20% Similarity=0.233 Sum_probs=38.5
Q ss_pred HhHHHHHHHHhhcCCCCCceEEeccCCcCc-------cccceeecCCCcCChHHHHHHHHHHHhc
Q psy11534 3 QVMATFEGLLKRSNYQQRPFILTRSGFAGS-------QRFGAIWTGDNMAEWSHLKISLPMCLSL 60 (81)
Q Consensus 3 ~~ka~~e~l~~~~~~~~R~filsRs~~aGs-------qry~~~W~GD~~s~W~~L~~~i~~~l~~ 60 (81)
|.++.|+.++++... .+++++.++.+.|. ++++.+|++|+...|+.+ +|...+++
T Consensus 507 y~~~~y~~~~~l~~~-~p~i~~~~C~~Gg~r~d~g~l~~~~~~W~sD~~d~~~r~--~i~~g~s~ 568 (732)
T 2xn2_A 507 YVLGYYDLLNKLVTR-YPDILFEGCSGGGGRFDVGQAYYTPQIWASDNTDAIERL--KIQYGTSL 568 (732)
T ss_dssp HHHHHHHHHHHHHHH-CTTSEEEECBTBBTTCSHHHHTTCSEEECBSCCCHHHHH--HHHHHHTT
T ss_pred HHHHHHHHHHHHHHh-CCCcEEEEecCcccccCchhhcccceEECCCCcCHHHHH--HHhcchhh
Confidence 455666655554432 37788999888764 555679999999999976 55566654
No 11
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=82.09 E-value=1.3 Score=29.50 Aligned_cols=57 Identities=16% Similarity=0.187 Sum_probs=37.4
Q ss_pred HHHHHHhhcCCCCCceEEeccCCcCccccce-------eecCCCcCChHHHHHHHHHHHhccccCCccccccCCCC
Q psy11534 7 TFEGLLKRSNYQQRPFILTRSGFAGSQRFGA-------IWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFVVGIG 75 (81)
Q Consensus 7 ~~e~l~~~~~~~~R~filsRs~~aGsqry~~-------~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsDiG~~ 75 (81)
||+-|+|..|+ +|.++|-|. -+.++. .-.||. +...+..+..==.+..+.+.|+|++
T Consensus 54 TydHLRe~~P~-R~I~vfDR~----~~~hp~~~P~~e~~ilGdi-------~~tL~~~~~r~g~~a~LaHaD~G~g 117 (174)
T 3iht_A 54 TYHHLRQHVQG-REIYVFERA----VASHPDSTPPEAQLILGDI-------RETLPATLERFGATASLVHADLGGH 117 (174)
T ss_dssp HHHHHHHHCCS-SCEEEEESS----CCCCGGGCCCGGGEEESCH-------HHHHHHHHHHHCSCEEEEEECCCCS
T ss_pred hHHHHHHhCCC-CcEEEEEee----eccCCCCCCchHheecccH-------HHHHHHHHHhcCCceEEEEeecCCC
Confidence 89999999998 599999998 444442 345654 3344443321134567889999743
No 12
>2yfo_A Alpha-galactosidase-sucrose kinase agask; hydrolase; HET: GLA GAL; 1.35A {Ruminococcus gnavus E1} PDB: 2yfn_A*
Probab=67.65 E-value=4.3 Score=31.96 Aligned_cols=49 Identities=16% Similarity=0.251 Sum_probs=29.9
Q ss_pred hHHHHHHHHhhcCCCCCceEEeccCCcC-------ccccceeecCCCcCChHHHHHH
Q psy11534 4 VMATFEGLLKRSNYQQRPFILTRSGFAG-------SQRFGAIWTGDNMAEWSHLKIS 53 (81)
Q Consensus 4 ~ka~~e~l~~~~~~~~R~filsRs~~aG-------sqry~~~W~GD~~s~W~~L~~~ 53 (81)
.++.|+.+++.... .+.+++.++..-| .+++..+|++|+...|+.++.|
T Consensus 496 ~~~~y~l~~~l~~~-~p~v~~e~C~~GG~r~D~g~l~~~~~~W~sD~~da~er~~iq 551 (720)
T 2yfo_A 496 VLGVYDFMERLCSR-YPDLLLEGCSGGGGRFDAGMLYYSPQIWCSDNTDAINRTRIQ 551 (720)
T ss_dssp HHHHHHHHHHHHHH-STTCEEEECBTBBTTCSHHHHTTCSEEECBSCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-CCCcEEEeccCCCCccccccceecccEecCCCCCHHHHHhhh
Confidence 34555555554321 2446666665534 2566689999998888777654
No 13
>3mi6_A Alpha-galactosidase; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium, hydrolase; 2.70A {Lactobacillus brevis}
Probab=57.22 E-value=7 Score=31.16 Aligned_cols=51 Identities=12% Similarity=0.229 Sum_probs=36.3
Q ss_pred HhHHHHHHHHhhcCCCCCceEEeccCCcCc-------cccceeecCCCcCChHHHHHHH
Q psy11534 3 QVMATFEGLLKRSNYQQRPFILTRSGFAGS-------QRFGAIWTGDNMAEWSHLKISL 54 (81)
Q Consensus 3 ~~ka~~e~l~~~~~~~~R~filsRs~~aGs-------qry~~~W~GD~~s~W~~L~~~i 54 (81)
+.++.|+.+++.+. +.--+++-+++--|. +++..+|++|+.---|-|+.|-
T Consensus 504 y~~g~y~ll~~l~~-~~P~v~ie~CssGGgR~D~g~L~~~~~~W~SD~tDa~eRl~IQ~ 561 (745)
T 3mi6_A 504 YILGVYQLYARLTQ-AYPNVLFESCASGGGRFDLGMMYYAPQAWTSDDTDAAERLLIQF 561 (745)
T ss_dssp HHHHHHHHHHHHHH-HCTTCEEEECSTTTSSCSHHHHHHSSEEECCSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh-hCCCeEEEecCCCCCccChhHHhcCCccccCCCCCHHHHHHHHc
Confidence 56788887777652 212388888888887 7777899999976666555543
No 14
>2atm_A Hyaluronoglucosaminidase; beta-alpha-barrels, hydrolase; HET: MES; 2.00A {Vespula vulgaris}
Probab=52.33 E-value=12 Score=27.17 Aligned_cols=43 Identities=5% Similarity=-0.112 Sum_probs=34.1
Q ss_pred CceEEeccCCcC-ccccceeecCCCcCChHHHHHHHHHHHhccccCCcccccc
Q psy11534 20 RPFILTRSGFAG-SQRFGAIWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFV 71 (81)
Q Consensus 20 R~filsRs~~aG-sqry~~~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsD 71 (81)
..|..+|-.|.- +-.| =+=++|..+|.....+++.|+-+||+.
T Consensus 256 pV~~Y~r~~y~d~~~~f---------Ls~~DL~~TigesaalGa~GiViWGss 299 (331)
T 2atm_A 256 KVLSYWWYVYQDETNTF---------LTETDVKKTFQEIVINGGDGIIIWGSS 299 (331)
T ss_dssp EEEEEEESEETTEEEEE---------CCHHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred ceEEEeeeEecCCcccc---------ccHHHHHHHHHHHHHcCCCeEEEeccc
Confidence 458899988852 2223 344999999999999999999999974
No 15
>3cc1_A BH1870 protein, putative alpha-N-acetylgalactosaminidase; structural genomic center for structural genomics, JCSG; HET: MSE PGE PG4 P33; 2.00A {Bacillus halodurans c-125}
Probab=49.06 E-value=46 Score=24.26 Aligned_cols=52 Identities=21% Similarity=0.287 Sum_probs=33.7
Q ss_pred HHHHHHHHhhcCCCCCceEEeccCC-------cCccccceee--cCCCcCChHHHHHHHHHHHhc
Q psy11534 5 MATFEGLLKRSNYQQRPFILTRSGF-------AGSQRFGAIW--TGDNMAEWSHLKISLPMCLSL 60 (81)
Q Consensus 5 ka~~e~l~~~~~~~~R~filsRs~~-------aGsqry~~~W--~GD~~s~W~~L~~~i~~~l~~ 60 (81)
++..++|++. .||++++=+.- .-..+|+..| ++|...+|+.+...+......
T Consensus 200 ~~~~~aL~~~----gr~i~~slc~g~~~~~~~~~~~~~~n~wR~s~D~~~~w~~~~~~~~~~~~~ 260 (433)
T 3cc1_A 200 KMIQRAIQAC----GRPMVLSLSPGPAPIKYAHHFKTNANMWRITDDFWDDWSLLYQMFERCEVW 260 (433)
T ss_dssp HHHHHHHHHS----SSCCEEECCCSBSSEESCSSSCCTTGGGCCEECCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhc----CCCEEEEecCCCCChhhhhhhhhhCcEEEeccCccccHHHHHHHHHHHHHH
Confidence 4556667652 38888765531 1224666677 789999999988777655433
No 16
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=45.20 E-value=20 Score=26.41 Aligned_cols=37 Identities=16% Similarity=0.364 Sum_probs=26.8
Q ss_pred CCceEEeccCCcCc------------cccceee--cCCCcCChHHHHHHHHH
Q psy11534 19 QRPFILTRSGFAGS------------QRFGAIW--TGDNMAEWSHLKISLPM 56 (81)
Q Consensus 19 ~R~filsRs~~aGs------------qry~~~W--~GD~~s~W~~L~~~i~~ 56 (81)
.||++++ ..++.- ++++..| ++|+..+|+.+...+..
T Consensus 164 GRpi~~s-c~w~~~~~~~~~~~~~~~~~~~n~WR~~~Di~d~W~sv~~i~~~ 214 (404)
T 3hg3_A 164 GRSIVYS-CEWPLYMWPFQKPNYTEIRQYCNHWRNFADIDDSWKSIKSILDW 214 (404)
T ss_dssp TCCCEEE-ECTGGGGTTTSCCCHHHHHHHCSEEECSCCCCSSHHHHHHHHHH
T ss_pred CCCEEEE-eCCCcccccccccchHHHhhhCcEEEecCCcCcchHHHHHHHHH
Confidence 4999998 666421 2556555 59999999998887764
No 17
>2pe4_A Hyaluronidase-1; hyaluronan, EGF-like domain, hydrolase; HET: NAG BMA MAN; 2.00A {Homo sapiens}
Probab=39.93 E-value=31 Score=25.89 Aligned_cols=43 Identities=9% Similarity=-0.089 Sum_probs=35.1
Q ss_pred CceEEeccCCcCccccceeecCCCcCChHHHHHHHHHHHhccccCCcccccc
Q psy11534 20 RPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFV 71 (81)
Q Consensus 20 R~filsRs~~aGsqry~~~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsD 71 (81)
..|+.+|-.|.-+-.|- +=++|..+|.....+++.|+-+||+.
T Consensus 263 PV~~Y~r~~Y~~~~~fL---------S~~DL~~TigesaalGa~GiViWGss 305 (424)
T 2pe4_A 263 PVLPYVQIFYDTTNHFL---------PLDELEHSLGESAAQGAAGVVLWVSW 305 (424)
T ss_dssp CBCCEECSBCBTSCCBC---------CHHHHHTTHHHHHHTTCSEEEEECCG
T ss_pred ceEEEEeeEecCccccc---------cHHHHHHHHHHHHHcCCCeEEEecch
Confidence 45889998885544443 44899999999999999999999974
No 18
>3ia4_A Dihydrofolate reductase; NADPH, methotrexate, oxidoreductase; HET: NDP MTX; 1.70A {Moritella profunda} SCOP: c.71.1.0 PDB: 3ia5_A 2zza_A*
Probab=35.95 E-value=13 Score=23.69 Aligned_cols=26 Identities=19% Similarity=0.181 Sum_probs=19.3
Q ss_pred hHhHHHHHHHHhhcCCCCCceEEeccC
Q psy11534 2 LQVMATFEGLLKRSNYQQRPFILTRSG 28 (81)
Q Consensus 2 ~~~ka~~e~l~~~~~~~~R~filsRs~ 28 (81)
+|-+-|||.+-+-.|+ ++.+++||..
T Consensus 42 IMGRkTyesi~~plp~-r~~iVlSr~~ 67 (162)
T 3ia4_A 42 VMGRNTFESIGRPLPG-RLNIVLSRQT 67 (162)
T ss_dssp EEEHHHHHHHCSCCTT-SCEEEECCCT
T ss_pred EEEchHHhhhhhhcCC-CeEEEEcCCC
Confidence 4668899999654565 3779999984
No 19
>3tq8_A Dihydrofolate reductase; oxidoreductase-oxidoreductase inhib complex; HET: NDP TOP; 1.90A {Coxiella burnetii} SCOP: c.71.1.0 PDB: 3tq9_A* 3tqa_A* 3tqb_A*
Probab=33.73 E-value=13 Score=24.26 Aligned_cols=26 Identities=19% Similarity=0.240 Sum_probs=19.4
Q ss_pred hHhHHHHHHHHhhcCCCCCceEEeccC
Q psy11534 2 LQVMATFEGLLKRSNYQQRPFILTRSG 28 (81)
Q Consensus 2 ~~~ka~~e~l~~~~~~~~R~filsRs~ 28 (81)
+|-+-|||.+-+-.|+ ++.+|+||+.
T Consensus 42 IMGRkTyesi~~plp~-R~niVlSr~~ 67 (178)
T 3tq8_A 42 VMGRRTFDSIGKPLPH-RRNIVITQQK 67 (178)
T ss_dssp EEEHHHHHHHCSCCTT-SEEEEECSCT
T ss_pred EEechHHhhhhhccCC-CeEEEEcCCC
Confidence 4668899999654555 3679999984
No 20
>3s9u_A Dihydrofolate reductase; oxidoreductase; HET: NAP 5DR; 1.90A {Bacillus anthracis} PDB: 3sa1_A* 3sa2_A* 3sai_A* 3e0b_A* 3jvx_A* 3jwm_A* 3jwk_A* 3jw5_A* 3jwf_A* 3jwc_A* 3jw3_A* 3dat_A* 2qk8_A* 3fl8_A* 3fl9_A* 2kgk_A*
Probab=33.45 E-value=16 Score=23.46 Aligned_cols=26 Identities=19% Similarity=0.241 Sum_probs=19.2
Q ss_pred hHhHHHHHHHHhhcCCCCCceEEeccC
Q psy11534 2 LQVMATFEGLLKRSNYQQRPFILTRSG 28 (81)
Q Consensus 2 ~~~ka~~e~l~~~~~~~~R~filsRs~ 28 (81)
+|-+-|||.+-+-.|+ ++.+++||+.
T Consensus 45 IMGRkTyesi~~plp~-r~~iVlSr~~ 70 (165)
T 3s9u_A 45 IMGRKNYEAIGRPLPG-RRNIIVTRNE 70 (165)
T ss_dssp EEEHHHHHHHCSCCTT-SCEEEECSCT
T ss_pred EEcchHHhhhhhccCC-CeEEEECCCC
Confidence 4668899998644455 4779999984
No 21
>3dau_A Dihydrofolate reductase; oxidoreductase, pseudo-rossmann fold, adenine nucleotide BIN domain, antibiotic resistance, methotrexate resistance; HET: MTX NAP; 1.50A {Escherichia coli} SCOP: c.71.1.1 PDB: 1ddr_A* 1dds_A* 3k74_A 1ra9_A* 1dre_A* 1drh_A* 1dyi_A* 1dyh_A* 1jol_A* 1jom_A* 1ra1_A* 1dyj_A* 1ra3_A* 1ra8_A* 1ra2_A* 1rb2_A* 1rb3_A* 1rc4_A* 1rd7_A* 1re7_A* ...
Probab=30.55 E-value=19 Score=23.00 Aligned_cols=26 Identities=15% Similarity=0.149 Sum_probs=19.1
Q ss_pred hHhHHHHHHHHhhcCCCCCceEEeccC
Q psy11534 2 LQVMATFEGLLKRSNYQQRPFILTRSG 28 (81)
Q Consensus 2 ~~~ka~~e~l~~~~~~~~R~filsRs~ 28 (81)
+|-+-|||.+-+-.|+ ++.+++||..
T Consensus 41 IMGRkT~esi~~plp~-r~~iVlSr~~ 66 (159)
T 3dau_A 41 IMGRHTWESIGRPLPG-RKNIILSSQP 66 (159)
T ss_dssp EEEHHHHHHHCSCCTT-SCEEEECSSC
T ss_pred EEechHHhhcccccCC-CEEEEECCCC
Confidence 4667899998644455 4779999985
No 22
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=28.28 E-value=96 Score=22.51 Aligned_cols=49 Identities=14% Similarity=0.264 Sum_probs=30.8
Q ss_pred HHHHHHHHh-hcCCCCCceEEeccCCcCccccceeec----------CCCcCChHHHHHHHHH
Q psy11534 5 MATFEGLLK-RSNYQQRPFILTRSGFAGSQRFGAIWT----------GDNMAEWSHLKISLPM 56 (81)
Q Consensus 5 ka~~e~l~~-~~~~~~R~filsRs~~aGsqry~~~W~----------GD~~s~W~~L~~~i~~ 56 (81)
+..|+.+++ +.. ..|+++++=+.+.+. ....|. +|+...|+.+...+..
T Consensus 181 ~~~Y~~m~~aL~~-~~~~i~~~~C~~G~~--~~~~w~~~~~n~wR~s~D~~d~w~~~~~i~~~ 240 (417)
T 1szn_A 181 AERFGAMRNALAK-QSHEIVLSMCIWGQA--DVFSWGNSTGISWRMSDDISPNWGSVTRILNL 240 (417)
T ss_dssp HHHHHHHHHHHHT-SSSCCEEEECCTTGG--GHHHHGGGTCSEEECSSCCCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-hCCCEEEEeCCCCCC--cchhhHhhcccceeecCCccccHHHHHHHHHH
Confidence 556777666 333 247888876654432 233565 9999999988544443
No 23
>1x67_A Drebrin-like protein; cell-free protein synthesis, actin-binding protein, SH3P7, MABP1, T-cell lymphocyte signaling and regulation; NMR {Homo sapiens}
Probab=27.19 E-value=82 Score=19.29 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=29.6
Q ss_pred HHHHHhhcCCCCCceEEeccCCcCccccc--e-eecCCCcCChHHHH
Q psy11534 8 FEGLLKRSNYQQRPFILTRSGFAGSQRFG--A-IWTGDNMAEWSHLK 51 (81)
Q Consensus 8 ~e~l~~~~~~~~R~filsRs~~aGsqry~--~-~W~GD~~s~W~~L~ 51 (81)
||.+.+..|.++.-|.+-|=.+.+++|+- . .|.||+...-+.++
T Consensus 57 ~~e~~~~L~~~~~~Y~~~r~~~~~~~~~K~vfI~W~pd~a~v~~Km~ 103 (146)
T 1x67_A 57 LEEMVEELNSGKVMYAFCRVKDPNSGLPKFVLINWTGEGVNDVRKGA 103 (146)
T ss_dssp HHHHHHHCCTTSEEEEEEEEECSSSCSEEEEEEEEECTTSCHHHHHH
T ss_pred HHHHHhhCCCCceEEEEEEEEcCCCCeeeEEEEEECCCCCChhheee
Confidence 55666656654345888887777766544 4 69999988765443
No 24
>1fcq_A Hyaluronoglucosaminidase; 7-stranded (beta/alpha) TIM barrel, glycosidase family 56, allergen, hydrolase; 1.60A {Apis mellifera} SCOP: c.1.8.9 PDB: 1fcu_A 1fcv_A* 2j88_A
Probab=25.94 E-value=32 Score=25.18 Aligned_cols=44 Identities=9% Similarity=-0.020 Sum_probs=33.8
Q ss_pred CceEEeccCCcCccccceeecCCCcCChHHHHHHHHHHHhccccCCcccccc
Q psy11534 20 RPFILTRSGFAGSQRFGAIWTGDNMAEWSHLKISLPMCLSLAVSEKKSANFV 71 (81)
Q Consensus 20 R~filsRs~~aGsqry~~~W~GD~~s~W~~L~~~i~~~l~~~lsG~~~~gsD 71 (81)
..|..+|-.|.-+. +..=+=++|..+|.....+++.|+-+||+.
T Consensus 261 PV~~Y~r~~Y~d~~--------~~fLS~~DL~~TigesaalGa~GiViWGss 304 (350)
T 1fcq_A 261 KVLPYYWYKYQDRR--------DTDLSRADLEATLRKITDLGADGFIIWGSS 304 (350)
T ss_dssp EECCEEESEETTEE--------EEECCHHHHHHHHHHHHHTTCSEEEEECCG
T ss_pred ceEEeEeeEecCCc--------cccccHHHHHHHHHHHHHcCCCeEEEeccc
Confidence 44779998876211 222344999999999999999999999974
No 25
>3dfr_A Dihydrofolate reductase; oxido-reductase; HET: NDP MTX; 1.70A {Lactobacillus casei} SCOP: c.71.1.1 PDB: 1ao8_A* 1bzf_A* 1dis_A* 1diu_A* 1lud_A* 2hm9_A* 2hqp_A* 2l28_A 2lf1_A*
Probab=25.87 E-value=14 Score=23.52 Aligned_cols=26 Identities=15% Similarity=0.158 Sum_probs=18.9
Q ss_pred hHhHHHHHHHH-hhcCCCCCceEEeccC
Q psy11534 2 LQVMATFEGLL-KRSNYQQRPFILTRSG 28 (81)
Q Consensus 2 ~~~ka~~e~l~-~~~~~~~R~filsRs~ 28 (81)
+|-+-|||.+. +-.|+ ++.+++||+-
T Consensus 40 iMGRkTyes~~~~plp~-r~~iVlS~~~ 66 (162)
T 3dfr_A 40 VVGRRTYESFPKRPLPE-RTNVVLTHQE 66 (162)
T ss_dssp EEEHHHHHHSSSSSCTT-SEEEEECSCT
T ss_pred EEecchhhhcccccCCC-CcEEEEcCCC
Confidence 46688999886 44455 3678999984
No 26
>3hrd_A Nicotinate dehydrogenase large molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=25.33 E-value=40 Score=24.62 Aligned_cols=41 Identities=15% Similarity=0.155 Sum_probs=31.5
Q ss_pred eecCC-CcCCh------HHHHHHHHHHHhccccCCccccccCCCCcccC
Q psy11534 38 IWTGD-NMAEW------SHLKISLPMCLSLAVSEKKSANFVVGIGAAAG 79 (81)
Q Consensus 38 ~W~GD-~~s~W------~~L~~~i~~~l~~~lsG~~~~gsDiG~~gf~g 79 (81)
.|.+| ...-| ...|..|+.+|.+-..=+-....++| |||.+
T Consensus 194 ~~~~~g~l~v~~stQ~p~~~r~~vA~~Lglp~~~VrV~~~~vG-GgFG~ 241 (425)
T 3hrd_A 194 YYDNEGMLTVVVSTQNPHYDRGEVAGMLALPNSKVRIIQATTG-GGFGG 241 (425)
T ss_dssp EECTTCCEEEEECCSCHHHHHHHHHHHTTCCGGGEEEEECBCC-CCTTT
T ss_pred EECCCCeEEEEECCCCHHHHHHHHHHHhCCChhhEEEEeCCCC-CCCCC
Confidence 57643 55555 46888999999888888888899998 78865
No 27
>2w9h_A DHFR, dihydrofolate reductase; oxidoreductase, one-carbon metabolism; HET: TOP; 1.48A {Staphylococcus aureus} PDB: 2w9g_A* 3sqy_X* 3srq_X* 3srr_X* 3srs_X* 3sru_X* 3srw_X* 3frd_X* 3fre_X* 3frf_X* 3fyv_X* 3fyw_X* 3sr5_X* 3frb_X* 3fra_X* 3fy8_X* 3fy9_X* 3fq0_A* 3f0b_X* 3f0s_X* ...
Probab=23.80 E-value=21 Score=22.28 Aligned_cols=26 Identities=27% Similarity=0.250 Sum_probs=17.9
Q ss_pred hHhHHHHHHHHhhcCCCCCceEEeccC
Q psy11534 2 LQVMATFEGLLKRSNYQQRPFILTRSG 28 (81)
Q Consensus 2 ~~~ka~~e~l~~~~~~~~R~filsRs~ 28 (81)
+|-+-|||.+..-.|+ ++.+++||+-
T Consensus 42 iMGRkTyes~~~pl~~-r~~iV~S~~~ 67 (159)
T 2w9h_A 42 VMGRKTFESIGKPLPN-RRNVVLTSDT 67 (159)
T ss_dssp EEEHHHHHHHCSCCTT-SEEEEECSCT
T ss_pred EECCChhhcccccCCC-CEEEEEcCCC
Confidence 4678899988532344 3678999973
No 28
>3bsu_A Ribonuclease H1, RNAse H1; RNAse H, RNA/DNA hybrid; HET: DNA 5IU; 2.10A {Homo sapiens}
Probab=22.52 E-value=70 Score=16.70 Aligned_cols=25 Identities=24% Similarity=0.529 Sum_probs=18.4
Q ss_pred CccccceeecCCC---cCChHHHHHHHH
Q psy11534 31 GSQRFGAIWTGDN---MAEWSHLKISLP 55 (81)
Q Consensus 31 Gsqry~~~W~GD~---~s~W~~L~~~i~ 55 (81)
|+.+|=++|.|.+ ..+|+.-+.||.
T Consensus 1 g~~kyYaV~~G~~~GIy~sW~ec~~qV~ 28 (53)
T 3bsu_A 1 GSHMFYAVRRGRKTGVFLTWNECRAQVD 28 (53)
T ss_dssp --CCEEEEEESSSCEEESSHHHHHHHHT
T ss_pred CCCCEEEEEeCCCCceECCHHHHHHHhc
Confidence 4567777888885 589999888884
No 29
>1juv_A DHFR, dihydrofolate reductase; complexed with NADPH, oxidoreductase; HET: NDP; 1.70A {Enterobacteria phage T4} SCOP: c.71.1.1
Probab=22.27 E-value=15 Score=23.98 Aligned_cols=25 Identities=12% Similarity=0.066 Sum_probs=18.6
Q ss_pred hHhHHHHHHHHhhcCCCCCceEEecc
Q psy11534 2 LQVMATFEGLLKRSNYQQRPFILTRS 27 (81)
Q Consensus 2 ~~~ka~~e~l~~~~~~~~R~filsRs 27 (81)
+|-+-|||.+-+..|+ ++.+++||.
T Consensus 50 IMGRkTyesi~~plp~-R~~iVlSr~ 74 (193)
T 1juv_A 50 IMGAKTFQSLPTLLPG-RSHIVVCDL 74 (193)
T ss_dssp EEEHHHHHTCSSCCTT-SCEEEECCT
T ss_pred EEchhHhhhcccccCC-CcEEEEcCC
Confidence 4678899988654565 377999986
Done!