BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11539
(530 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GP71|YELL_DROMD Protein yellow OS=Drosophila madeirensis GN=y PE=3 SV=1
Length = 568
Score = 220 bits (560), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 197/374 (52%), Gaps = 37/374 (9%)
Query: 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFT 207
Q + W +DF F + + K + S +IP N LP+G+ + + +F++ P+W+ GIP T
Sbjct: 32 LQERYSWNQLDFAFPNARLKEQALASGDYIPTNALPVGVEHFGNRLFVTVPRWRDGIPAT 91
Query: 208 LASFNMNDP-SESPILLPYPNWSYFDDSNC-NSLISVFRMSVDKCDRLWIMDTGVTNILS 265
L NM+ + SP L+PYP+W +C NS+ + +R+ VD+C RLW++DTG I +
Sbjct: 92 LTYINMDHSVTGSPELIPYPDWRANTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGN 151
Query: 266 SIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 325
+ CP I +FDL TNT IR+Y LP A + +NI ++ ++CD FAY D
Sbjct: 152 TTTNPCPYAINIFDLTTNTRIRRYELPAADTNPNTFIANIAVDIGKNCDDAFAYFADELG 211
Query: 326 YGLIVYDFFKNTSYRLT-HPYMYPEPTQSTYILDNLKFRWV-DGIFGMAISPELSGYKYK 383
YGLI Y + N S+R + H Y +P+P + + + + F+W +GIFGM+++P S
Sbjct: 212 YGLISYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLTPIRS----- 266
Query: 384 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDI 443
D R +YF ++S+R + VST LR+ +R + D
Sbjct: 267 ------------------------DGYRTLYFSPLASHRQFAVSTRILRDETR---TEDS 299
Query: 444 DEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRD 503
F L R N ++ ++ +GV +NL+ +++VGCW++ Y PQ+ IV
Sbjct: 300 YHDFVALDERGPNAHTTSRVMSDDGVELFNLIDQNAVGCWHSSMP-YSPQSHGIVDRDDV 358
Query: 504 ILNFREEGEEEEEK 517
L F + + +E K
Sbjct: 359 GLVFPADVKIDENK 372
>sp|Q9GP81|YELL_DROGU Protein yellow OS=Drosophila guanche GN=y PE=3 SV=1
Length = 568
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 122/374 (32%), Positives = 195/374 (52%), Gaps = 37/374 (9%)
Query: 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFT 207
Q + W +DF F + K + S +IP N LP+G+ + + +F++ P+W+ GIP T
Sbjct: 32 LQERYSWNQLDFAFPSARLKEQALASGDYIPTNALPVGVEHFGNRLFVTVPRWRDGIPAT 91
Query: 208 LASFNMNDP-SESPILLPYPNWSYFDDSNC-NSLISVFRMSVDKCDRLWIMDTGVTNILS 265
L NM+ + SP L+PYP+W +C NS+ + +R+ VD+C RLW++DTG I +
Sbjct: 92 LTYINMDHSVTGSPELIPYPDWRANTAGDCSNSITTAYRIKVDECGRLWVLDTGTVGIGN 151
Query: 266 SIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 325
+ CP I +FDL TNT IR+Y LP A + +NI ++ ++CD FAY D
Sbjct: 152 TTTNPCPYAINIFDLTTNTRIRRYELPAADTNPNTFIANIAVDIGKNCDDAFAYFADELG 211
Query: 326 YGLIVYDFFKNTSYRLT-HPYMYPEPTQSTYILDNLKFRWV-DGIFGMAISPELSGYKYK 383
YGLI Y + N S+R + H Y +P+P + + + + F+W +GIFGM+++P S
Sbjct: 212 YGLISYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLTPIRS----- 266
Query: 384 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDI 443
D R +YF ++S+R + VST LR+ +R + D
Sbjct: 267 ------------------------DGYRTLYFSPLASHRQFAVSTRILRDETR---TEDS 299
Query: 444 DEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRD 503
F L R N ++ ++ +GV +NL+ +++VGCW++ Y PQ IV
Sbjct: 300 YHDFVALDERGPNAHTTSRVMSDDGVELFNLIDQNAVGCWHSSMP-YSPQFHGIVDRDDV 358
Query: 504 ILNFREEGEEEEEK 517
L F + + +E K
Sbjct: 359 GLVFPADVKIDENK 372
>sp|O02437|YELL_DROSU Protein yellow OS=Drosophila subobscura GN=y PE=3 SV=1
Length = 568
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/374 (32%), Positives = 195/374 (52%), Gaps = 37/374 (9%)
Query: 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFT 207
Q + W +DF F + K + S +IP N LP+G+ + + +F++ P+W+ GIP T
Sbjct: 32 LQERYSWNQLDFAFPSARLKEQALASGDYIPTNALPVGVEHFGNRLFVTVPRWRDGIPAT 91
Query: 208 LASFNMNDP-SESPILLPYPNWSYFDDSNC-NSLISVFRMSVDKCDRLWIMDTGVTNILS 265
L NM+ + SP L+PYP+W +C NS+ + +R+ VD+C RLW++DTG I +
Sbjct: 92 LTYINMDHSVTGSPELIPYPDWRANTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGN 151
Query: 266 SIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 325
+ CP I +FDL T+T IR+Y LP A + +NI ++ + CD FAY D
Sbjct: 152 TTTNPCPYAINIFDLATDTRIRRYELPAADTNPNTFIANIAVDIGKSCDDAFAYFADELG 211
Query: 326 YGLIVYDFFKNTSYRLT-HPYMYPEPTQSTYILDNLKFRWV-DGIFGMAISPELSGYKYK 383
YGLI Y + N S+R + H Y +P+P + + + + F+W +GIFGM+++P S
Sbjct: 212 YGLISYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLTPIRS----- 266
Query: 384 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDI 443
D R +YF ++S+R + VST LR+ +R + D
Sbjct: 267 ------------------------DGYRTLYFSPLASHRQFAVSTRILRDETR---TEDS 299
Query: 444 DEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRD 503
F L R N ++ ++ +GV +NL+ +++VGCW++ Y PQ+ IV
Sbjct: 300 YHDFVALDERGPNAHTTSRVMSDDGVELFNLIDQNAVGCWHSSMP-YSPQSHGIVDRDDV 358
Query: 504 ILNFREEGEEEEEK 517
L F + + +E K
Sbjct: 359 GLVFPADIKIDENK 372
>sp|Q9BI18|YELL_DROPS Protein yellow OS=Drosophila pseudoobscura pseudoobscura GN=y PE=3
SV=2
Length = 560
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 121/377 (32%), Positives = 199/377 (52%), Gaps = 43/377 (11%)
Query: 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFT 207
Q + W +DF F + + K + S +IP+N LP+G+ + + +F++ P+W+ GIP T
Sbjct: 34 LQERYSWNQLDFAFPNARLKEQAMASGDYIPQNALPVGVEHFGNRLFVTVPRWRDGIPAT 93
Query: 208 LASFNMNDP-SESPILLPYPNWSYFDDSNC-NSLISVFRMSVDKCDRLWIMDTGVTNILS 265
L NM+ + SP L+PYP+W +C NS+ + +R+ VD+C RLW++DTG I +
Sbjct: 94 LTYINMDHSVTGSPELIPYPDWRANTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGN 153
Query: 266 SIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 325
+ CP + VFDL TNT IR+Y LP A + +NI ++ ++CD +AY D
Sbjct: 154 TTTNPCPYAVNVFDLTTNTRIRRYELPAADTNPNTFIANIAVDIGKNCDDAYAYFADELG 213
Query: 326 YGLIVYDFFKNTSYRLT-HPYMYPEPTQSTYILDNLKFRWV-DGIFGMAISPELSGYKYK 383
YGLI Y + N S+R + H Y +P+P + + + + F+W +GIFGM+++P S
Sbjct: 214 YGLISYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLTPIRS----- 268
Query: 384 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDI 443
D R +YF ++S+R + VST LR+ +R I
Sbjct: 269 ------------------------DGYRTLYFSPLASHRQFAVSTRILRDETR------I 298
Query: 444 DEYFH---YLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQT 500
++ +H L R N ++ ++ +GV +NL+ +++VGCW++ Y PQ IV
Sbjct: 299 EDSYHDFVALDERGPNAHTTSRVMSDDGVELFNLIDQNAVGCWHSSMP-YSPQFHGIVDR 357
Query: 501 SRDILNFREEGEEEEEK 517
L F + + +E K
Sbjct: 358 DDVGLVFPADVKIDENK 374
>sp|Q9BI23|YELL_DROER Protein yellow OS=Drosophila erecta GN=y PE=3 SV=1
Length = 541
Score = 215 bits (548), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/374 (31%), Positives = 199/374 (53%), Gaps = 37/374 (9%)
Query: 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFT 207
Q + W +DF F + + K + S +IP+N LP+G+ + + +F++ P+W+ GIP T
Sbjct: 25 LQERYSWNQLDFAFPNARLKEQALASGDYIPQNALPVGVEHFGNRLFVTVPRWRDGIPAT 84
Query: 208 LASFNMNDP-SESPILLPYPNWSYFDDSNC-NSLISVFRMSVDKCDRLWIMDTGVTNILS 265
L NM+ + SP L+PYP+W +C NS+ + +R+ VD+C RLW++DTG I +
Sbjct: 85 LTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGN 144
Query: 266 SIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 325
+ CP + V+DL T+T IR+Y+LP + +NI ++ ++CD +AY D
Sbjct: 145 TTTNPCPYAVNVYDLTTDTRIRRYVLPAVDTNPNTFIANIAVDIGKNCDDAYAYFADELG 204
Query: 326 YGLIVYDFFKNTSYRLT-HPYMYPEPTQSTYILDNLKFRWV-DGIFGMAISPELSGYKYK 383
YGLI Y + ++ S+R + H Y +P+P + + + + F+W +GIFGM++SP S
Sbjct: 205 YGLIAYSWEQDKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRS----- 259
Query: 384 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDI 443
D R +YF ++S+R + VST LR+ +R + D
Sbjct: 260 ------------------------DGYRTLYFSPLASHRQFAVSTRILRDETR---TEDS 292
Query: 444 DEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRD 503
F L R N+ ++ ++ +G+ +NL+ +++VGCW++ Y PQ IV
Sbjct: 293 YHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQNAVGCWHSSMP-YSPQFHGIVDRDDV 351
Query: 504 ILNFREEGEEEEEK 517
L F + + +E K
Sbjct: 352 GLVFPADVKIDENK 365
>sp|Q9BI17|YELL_DROYA Protein yellow OS=Drosophila yakuba GN=y PE=3 SV=1
Length = 541
Score = 215 bits (547), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 118/374 (31%), Positives = 198/374 (52%), Gaps = 37/374 (9%)
Query: 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFT 207
Q + W +DF F + + K + S +IP+N LP+G+ + + +F++ P+W+ GIP T
Sbjct: 25 LQERYSWNQLDFAFPNARLKEQALASGDYIPQNGLPVGVEHFGNRLFVTVPRWRDGIPAT 84
Query: 208 LASFNMNDP-SESPILLPYPNWSYFDDSNC-NSLISVFRMSVDKCDRLWIMDTGVTNILS 265
L NM+ + SP L+PYP+W +C NS+ + +R+ VD+C RLW++DTG I +
Sbjct: 85 LTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGN 144
Query: 266 SIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 325
+ CP + VFDL T+T IR+Y LP + +NI ++ ++CD +AY D
Sbjct: 145 TTTNPCPYAVNVFDLTTDTRIRRYELPAVDTNPNTFIANIAVDIGKNCDDAYAYFADELG 204
Query: 326 YGLIVYDFFKNTSYRLT-HPYMYPEPTQSTYILDNLKFRWV-DGIFGMAISPELSGYKYK 383
YGLI Y + ++ S+R + H Y +P+P + + + + F+W +GIFGM++SP S
Sbjct: 205 YGLIAYSWEQDKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRS----- 259
Query: 384 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDI 443
D R +YF ++S+R + VST LR+ +R + D
Sbjct: 260 ------------------------DGYRTLYFSPLASHRQFAVSTRILRDETR---TEDS 292
Query: 444 DEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRD 503
F L R N+ ++ ++ +G+ +NL+ +++VGCW++ Y PQ IV
Sbjct: 293 YHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQNAVGCWHSSMP-YSPQFHGIVDRDDV 351
Query: 504 ILNFREEGEEEEEK 517
L F + + +E K
Sbjct: 352 GLVFPADVKIDENK 365
>sp|P09957|YELL_DROME Protein yellow OS=Drosophila melanogaster GN=y PE=1 SV=1
Length = 541
Score = 214 bits (546), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 197/374 (52%), Gaps = 37/374 (9%)
Query: 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFT 207
Q + W +DF F + + K + S +IP+N LP+G+ + + +F++ P+W+ GIP T
Sbjct: 25 LQERYSWSQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFGNRLFVTVPRWRDGIPAT 84
Query: 208 LASFNMNDP-SESPILLPYPNWSYFDDSNC-NSLISVFRMSVDKCDRLWIMDTGVTNILS 265
L NM+ + SP L+PYP+W +C NS+ + +R+ VD+C RLW++DTG I +
Sbjct: 85 LTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGN 144
Query: 266 SIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 325
+ CP + VFDL T+T IR+Y LP + +NI ++ ++CD +AY D
Sbjct: 145 TTTNPCPYAVNVFDLTTDTRIRRYELPGVDTNPNTFIANIAVDIGKNCDDAYAYFADELG 204
Query: 326 YGLIVYDFFKNTSYRLT-HPYMYPEPTQSTYILDNLKFRWV-DGIFGMAISPELSGYKYK 383
YGLI Y + N S+R + H Y +P+P + + + + F+W +GIFGM++SP S
Sbjct: 205 YGLIAYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRS----- 259
Query: 384 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDI 443
D R +YF ++S+R + VST LR+ +R + D
Sbjct: 260 ------------------------DGYRTLYFSPLASHRQFAVSTRILRDETR---TEDS 292
Query: 444 DEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRD 503
F L R N+ ++ ++ +G+ +NL+ +++VGCW++ Y PQ IV
Sbjct: 293 YHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQNAVGCWHSSMP-YSPQFHGIVDRDDV 351
Query: 504 ILNFREEGEEEEEK 517
L F + + +E K
Sbjct: 352 GLVFPADVKIDENK 365
>sp|P62407|YELL_DROSI Protein yellow OS=Drosophila simulans GN=y PE=3 SV=1
Length = 541
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 197/374 (52%), Gaps = 37/374 (9%)
Query: 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFT 207
Q + W +DF F + + K + S +IP+N LP+G+ + + +F++ P+W+ GIP T
Sbjct: 25 LQERYSWNQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFGNRLFVTVPRWRDGIPAT 84
Query: 208 LASFNMNDP-SESPILLPYPNWSYFDDSNC-NSLISVFRMSVDKCDRLWIMDTGVTNILS 265
L NM+ + SP L+PYP+W +C NS+ + +R+ VD+C RLW++DTG I +
Sbjct: 85 LTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGN 144
Query: 266 SIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 325
+ CP + VFDL T+T IR+Y LP + +NI ++ ++CD +AY D
Sbjct: 145 TTTNPCPYAVNVFDLTTDTRIRRYELPGVDTNPNTFIANIAVDIGKNCDDAYAYFADELG 204
Query: 326 YGLIVYDFFKNTSYRLT-HPYMYPEPTQSTYILDNLKFRWV-DGIFGMAISPELSGYKYK 383
YGLI Y + N S+R + H Y +P+P + + + + F+W +GIFGM++SP S
Sbjct: 205 YGLIAYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRS----- 259
Query: 384 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDI 443
D R +YF ++S+R + VST LR+ +R + D
Sbjct: 260 ------------------------DGYRTLYFSPLASHRQFAVSTRILRDETR---TEDS 292
Query: 444 DEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRD 503
F L R N+ ++ ++ +G+ +NL+ +++VGCW++ Y PQ IV
Sbjct: 293 YHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQNAVGCWHSSMP-YSPQFHGIVDRDDV 351
Query: 504 ILNFREEGEEEEEK 517
L F + + +E K
Sbjct: 352 GLVFPADVKIDENK 365
>sp|P62408|YELL_DROMA Protein yellow OS=Drosophila mauritiana GN=y PE=3 SV=1
Length = 541
Score = 214 bits (544), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 197/374 (52%), Gaps = 37/374 (9%)
Query: 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFT 207
Q + W +DF F + + K + S +IP+N LP+G+ + + +F++ P+W+ GIP T
Sbjct: 25 LQERYSWNQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFGNRLFVTVPRWRDGIPAT 84
Query: 208 LASFNMNDP-SESPILLPYPNWSYFDDSNC-NSLISVFRMSVDKCDRLWIMDTGVTNILS 265
L NM+ + SP L+PYP+W +C NS+ + +R+ VD+C RLW++DTG I +
Sbjct: 85 LTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGN 144
Query: 266 SIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 325
+ CP + VFDL T+T IR+Y LP + +NI ++ ++CD +AY D
Sbjct: 145 TTTNPCPYAVNVFDLTTDTRIRRYELPGVDTNPNTFIANIAVDIGKNCDDAYAYFADELG 204
Query: 326 YGLIVYDFFKNTSYRLT-HPYMYPEPTQSTYILDNLKFRWV-DGIFGMAISPELSGYKYK 383
YGLI Y + N S+R + H Y +P+P + + + + F+W +GIFGM++SP S
Sbjct: 205 YGLIAYSWELNKSWRFSAHSYFFPDPLRGDFNVAGINFQWGEEGIFGMSLSPIRS----- 259
Query: 384 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDI 443
D R +YF ++S+R + VST LR+ +R + D
Sbjct: 260 ------------------------DGYRTLYFSPLASHRQFAVSTRILRDETR---TEDS 292
Query: 444 DEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRD 503
F L R N+ ++ ++ +G+ +NL+ +++VGCW++ Y PQ IV
Sbjct: 293 YHDFVALDERGPNSHTTSRVMSDDGIELFNLIDQNAVGCWHSSMP-YSPQFHGIVDRDDV 351
Query: 504 ILNFREEGEEEEEK 517
L F + + +E K
Sbjct: 352 GLVFPADVKIDENK 365
>sp|O18330|MRJP1_APIME Major royal jelly protein 1 OS=Apis mellifera GN=MRJP1 PE=1 SV=1
Length = 432
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 167/344 (48%), Gaps = 54/344 (15%)
Query: 150 VVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFTLA 209
++ WK D+ F ++++ + I S ++ +NN P I W IF++ ++ G+P +L
Sbjct: 33 ILHEWKFFDYDFGSDERRQDAILSGEYDYKNNYPSDIDQWHDKIFVTMLRYN-GVPSSLN 91
Query: 210 SFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQ 269
+ P+L PYP+WS+ +C+ ++S ++++DKCDRLW++D+G+ N + Q
Sbjct: 92 VISKKVGDGGPLLQPYPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLDSGLVN---NTQP 148
Query: 270 LCPPKIMVFDLKTNTLIRKYILP-----TAQVFEGSLFSNIVTEVVEDCD---HVFAYVN 321
+C PK++ FDL T+ L+++ +P A +G L S V + DC+ Y+
Sbjct: 149 MCSPKLLTFDLTTSQLLKQVEIPHDVAVNATTGKGRLSSLAVQSL--DCNTNSDTMVYIA 206
Query: 322 DVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYK 381
D GLIVY ++ +RLT +P + +D + DGI GMA+SP +
Sbjct: 207 DEKGEGLIVYHNSDDSFHRLTSNTFDYDPKFTKMTIDGESYTAQDGISGMALSPMTNN-- 264
Query: 382 YKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSS 441
+Y+ ++S YYV+T R S N
Sbjct: 265 -------------------------------LYYSPVASTSLYYVNTEQFRTSDYQQND- 292
Query: 442 DIDEYFHYLGSR-FKNTQASASAINSNGVMFYNLVTKHSVGCWN 484
HY G + +TQ+SA ++ +GV+F+ LV ++GCWN
Sbjct: 293 -----IHYEGVQNILDTQSSAKVVSKSGVLFFGLVGDSALGCWN 331
>sp|O77061|MRJP2_APIME Major royal jelly protein 2 OS=Apis mellifera GN=MRJP2 PE=1 SV=1
Length = 452
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 167/363 (46%), Gaps = 51/363 (14%)
Query: 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFT 207
V+ WK D+ F +++ I+S ++ N P + WR F++ ++ G+P T
Sbjct: 32 LNVIHEWKYFDYDFGSEERRQAAIQSGEYDHTKNYPFDVDQWRDKTFVTILRYD-GVPST 90
Query: 208 LASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVTNILSSI 267
L + +L PYP+WS+ + +C+ ++S F++++DK DRLW++D+G+ N +
Sbjct: 91 LNVISGKTGKGGRLLKPYPDWSFAEFKDCSKIVSAFKIAIDKFDRLWVLDSGLVNRTVPV 150
Query: 268 QQLCPPKIMVFDLKTNTLIRKYILP-----TAQVFEGSLFSNIVTEVVEDCDHVFAYVND 322
C PK+ VFDLKT+ +++ +P A +G L S V + D + Y+ D
Sbjct: 151 ---CAPKLHVFDLKTSNHLKQIEIPHDIAVNATTGKGGLVSLAVQAI--DLANTLVYMAD 205
Query: 323 VFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKY 382
LIVY ++ +RLT +P + +D F +GI GMA+SP +
Sbjct: 206 HKGDALIVYQNADDSFHRLTSNTFDYDPRYAKMTIDGESFTLKNGICGMALSPVTNN--- 262
Query: 383 KRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSD 442
+Y+ ++S+ YYV N++ ++ S
Sbjct: 263 ------------------------------LYYSPLASHGLYYV------NTAPFMKSQF 286
Query: 443 IDEYFHYLGSR-FKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTS 501
+ Y GS NTQ+ A A++ NGV+F LV +VGCWN + + + Q
Sbjct: 287 GENNVQYQGSEDILNTQSLAKAVSKNGVLFVGLVGNSAVGCWNEHQSLQRQNLEMVAQND 346
Query: 502 RDI 504
R +
Sbjct: 347 RTL 349
>sp|Q17060|MRJP3_APIME Major royal jelly protein 3 OS=Apis mellifera GN=MRJP3 PE=1 SV=1
Length = 544
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 169/364 (46%), Gaps = 52/364 (14%)
Query: 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFT 207
+V++ WK +DF F ++++ I+S +F N P + WR F++ + G+P +
Sbjct: 37 MKVIYEWKHIDFDFGSDERRDAAIKSGEFDHTKNYPFDVDRWRDKTFVTIER-NNGVPSS 95
Query: 208 LASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVTNILSSI 267
L P+L PYP+WS+ +C+ ++S F+++VDK DRLW++D+G+ N +
Sbjct: 96 LNVVTNKKGKGGPLLRPYPDWSFAKYEDCSGIVSAFKIAVDKFDRLWVLDSGLVN---NN 152
Query: 268 QQLCPPKIMVFDLKTNTLIRKYILP-----TAQVFEGSLFSNIVTEVVEDCDHVFAYVND 322
Q +C PK++ FDLKT+ L+++ +P A G L S V + D + Y+ D
Sbjct: 153 QPMCSPKLLTFDLKTSKLVKQVEIPHNIAVNATTGMGELVSLAVQAI--DRTNTMVYIAD 210
Query: 323 VFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKY 382
GLI+Y ++ +RLT +P + + F +GI+G+A+SP +
Sbjct: 211 EKGEGLIMYQNSDDSFHRLTSNTFDYDPRYTKLTVAGESFTVKNGIYGIALSPVTNN--- 267
Query: 383 KRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSD 442
+Y+ + S+ YYV T N N+
Sbjct: 268 ------------------------------LYYSPLLSHGLYYVDTEQFSNPQYEENN-- 295
Query: 443 IDEYFHYLGSR-FKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTS 501
Y GS+ NTQ+ ++ NGV+F LV + C N + +V ++ D+V +
Sbjct: 296 ----VQYEGSQDILNTQSFGKVVSKNGVLFLGLVGNSGIACVN-EHQVLQRESFDVVAQN 350
Query: 502 RDIL 505
+ L
Sbjct: 351 EETL 354
>sp|O97432|MRJP5_APIME Major royal jelly protein 5 OS=Apis mellifera GN=MRJP5 PE=2 SV=1
Length = 598
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 165/344 (47%), Gaps = 47/344 (13%)
Query: 145 SSHFQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGI 204
++ V+ WK +D+ F ++++ ++S ++ N P + WR F++ P++K G+
Sbjct: 32 ANSMNVIHEWKYLDYDFGSDERRQAAMQSGEYDHTKNYPFDVDQWRGMTFVTVPRYK-GV 90
Query: 205 PFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVTNIL 264
P +L + + +L PYP+WS+ + +C+ ++S +++++DK DRLWI+D+G+ N
Sbjct: 91 PSSLNVISEKIGNGGRLLQPYPDWSWANYKDCSGIVSAYKIAIDKFDRLWILDSGIIN-- 148
Query: 265 SSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLF-SNIVTEVVEDCDHV--FAYVN 321
+ Q +C PK+ VFDL T+ +++ ++P S +V+ VV+ D V Y+
Sbjct: 149 -NTQPMCSPKLHVFDLNTSHQLKQVVMPHDIAVNASTGNGGLVSLVVQAMDPVNTIVYMA 207
Query: 322 DVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYK 381
D LIVY + +RLT +P + F DGIFGMA+SP +
Sbjct: 208 DDKGDALIVYQNSDESFHRLTSNTFDYDPKYIKMMDAGESFTAQDGIFGMALSPMTNN-- 265
Query: 382 YKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSS 441
+Y+ +SS YYV+T S N+
Sbjct: 266 -------------------------------LYYSPLSSRSLYYVNTKPFMKSEYGANN- 293
Query: 442 DIDEYFHYLGSR-FKNTQASASAINSNGVMFYNLVTKHSVGCWN 484
Y G + NT++ A ++ NGV+F+ L+ ++GCWN
Sbjct: 294 -----VQYQGVQDIFNTESIAKIMSKNGVLFFGLMNNSAIGCWN 332
>sp|Q17061|MRJP4_APIME Major royal jelly protein 4 OS=Apis mellifera GN=MRJP4 PE=1 SV=1
Length = 464
Score = 127 bits (318), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 175/361 (48%), Gaps = 50/361 (13%)
Query: 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFT 207
V+ +WK +D+ F +++++ I+S ++ N PL + W + FL+ ++ G+P +
Sbjct: 36 LNVIHKWKYLDYDFDNDERRQAAIQSGEYDRTKNYPLDVDQWHNKTFLAVIRYN-GVPSS 94
Query: 208 LASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVTNILSSI 267
L + + +L PYP+WS+ +C+ ++S ++++D+ +RLW++D+G+ N +
Sbjct: 95 LNVVSDKTGNGGRLLQPYPDWSFAKYEDCSGIVSAHKIAIDEYERLWVLDSGLVN---NT 151
Query: 268 QQLCPPKIMVFDLKTNTLIRKYILP--TAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 325
Q +C PK+ FDL T+ L+++ +P A +G L S +T D + Y+ D +
Sbjct: 152 QPMCSPKLFAFDLNTSQLLKQVEIPHDVATTGKGELVS--LTVQAMDSTNTMVYMVD-NK 208
Query: 326 YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDG-IFGMAISPELSGYKYKR 384
LI+Y ++ +RL+ + + + +NL + VD ++GMA+SP
Sbjct: 209 NTLIIYQNADDSFHRLSSHTLNHNSDKMSDQQENLTLKEVDNKVYGMALSP--------- 259
Query: 385 HPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDID 444
V H +Y++S SS YYV+T L S N D
Sbjct: 260 ---------VTH---------------NLYYNSPSSENLYYVNTESLMKSENQGN----D 291
Query: 445 EYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDI 504
+ + F ++Q + A++ NGV+ + L +++ CWN + Q D+V + D
Sbjct: 292 VQYERVQDVF-DSQLTVKAVSKNGVLLFGLAN-NTLSCWNEHQSLD-RQNIDVVARNEDT 348
Query: 505 L 505
L
Sbjct: 349 L 349
>sp|Q55CT5|SEC31_DICDI Protein transport protein SEC31 OS=Dictyostelium discoideum GN=sec31
PE=3 SV=1
Length = 1355
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 82 RPMAPSGPSQPMRPAMGQKNNNQPPNTKSNAGPARPSTDQTKSFYPSVPSNGHP 135
RPM PSGPS PM P N PP + GP+ + Q P +P NG+P
Sbjct: 1059 RPMQPSGPS-PMNPPPTMNNTQPPPMMNTMGGPSSVNNSQP----PIIPMNGNP 1107
>sp|O29701|MTAD1_ARCFU 5-methylthioadenosine/S-adenosylhomocysteine deaminase 1
OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
DSM 4304 / JCM 9628 / NBRC 100126) GN=mtaD1 PE=3 SV=1
Length = 422
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/101 (21%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 387 YEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEY 446
+++++ ++ N N K++R+ ++Y ++ + Y VS LR ++ DI +
Sbjct: 140 FDFFNPDLLELNLKNAVKSLREIEKYDVLRAIGPHAVYTVSLDGLRRAAEIAEEMDIFMH 199
Query: 447 FHYLGSR-----FKNTQAS--ASAINSNGVMFYNLVTKHSV 480
FH + FK A++ G + L+ HSV
Sbjct: 200 FHLAETEKEVLDFKKQHGKLIVQALDEIGFLSKRLIAAHSV 240
>sp|Q66HR2|MARE1_RAT Microtubule-associated protein RP/EB family member 1 OS=Rattus
norvegicus GN=Mapre1 PE=1 SV=3
Length = 268
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 13/87 (14%)
Query: 30 NPNFVDWEKELFNTNYTNNFLNVDLKKLRP-QSQNEKENRMPVSTQAPAVTTYRPMAPSG 88
N FV W K+ F+ NY D K+ P ++ +E + S APA++ + SG
Sbjct: 104 NFEFVQWFKKFFDANY-------DGKEYDPVAARQGQETAVAPSLVAPALSKPKKPLGSG 156
Query: 89 PSQPMRPAMGQKNNNQPPNTKSNAGPA 115
+ P RP Q+ P AGP
Sbjct: 157 SAAPQRPIATQRTTAAP-----KAGPG 178
>sp|Q8W4P1|CDKC2_ARATH Cyclin-dependent kinase C-2 OS=Arabidopsis thaliana GN=CDKC-2 PE=1
SV=2
Length = 513
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 37/92 (40%), Gaps = 19/92 (20%)
Query: 55 KKLRPQSQNEKENRMPVSTQAPAVTTYRPMAPSGPSQPMRPAMGQKNNNQPPNTKSNAGP 114
KK + Q ++ +R+P + P+ P+GP+ PM NNN PP
Sbjct: 363 KKQKLQHPQQQHSRLPPQQHGVGQSHAAPLWPAGPNHPM-------NNNAPP-------- 407
Query: 115 ARPSTDQTKSFYPSVPSNGHPSVPSNAYPSSS 146
P +Y P G P VP N YP S
Sbjct: 408 --PQIPAGGHYYGGKPRGGAP-VP-NRYPPSG 435
>sp|A6QL29|AGNO1_BFPYV Avian agnoprotein 1a OS=Budgerigar fledgling disease virus PE=1
SV=1
Length = 176
Score = 32.7 bits (73), Expect = 7.6, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 17/112 (15%)
Query: 33 FVDWEKELFNTNYTNNFLNVDLKKLRPQSQNEKENRMPVSTQAPAVTTYRPMAPSGPSQP 92
F E E+ T L +LK L+ + KE + A +T P PSQP
Sbjct: 81 FGKLESEIRETKSQLETLRQELKHLQADVDDLKE-----TVYAAGTSTASTSVP--PSQP 133
Query: 93 MRPAMGQKNNNQPPNTKSNAGPARPSTDQTKSFYPSVPSNGHPSVPSNAYPS 144
P P T A PA P+T+ T++ PSV +N + PS + P+
Sbjct: 134 NSPT--------PTATTPEASPAAPTTESTETTGPSVATNA--TEPSESRPA 175
>sp|A2RUV5|HFM1_XENTR Probable ATP-dependent DNA helicase HFM1 OS=Xenopus tropicalis
GN=hfm1 PE=2 SV=1
Length = 1336
Score = 32.7 bits (73), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 15/99 (15%)
Query: 217 SESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQ------- 269
S SP+ N S F SL + S++ D+ I++ G +N ++S +
Sbjct: 26 SLSPVTDTEENMSAFK----KSLFGKYDCSLNSEDQCLIVENGSSNFVTSKEAQKEAMKA 81
Query: 270 ---LCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNI 305
+CPP+ M F+L T+++K +L + F S SNI
Sbjct: 82 DSDICPPQQMAFNLFNETVVQKDML-NKEKFSHSASSNI 119
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 212,083,655
Number of Sequences: 539616
Number of extensions: 9584098
Number of successful extensions: 29691
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 153
Number of HSP's that attempted gapping in prelim test: 29052
Number of HSP's gapped (non-prelim): 512
length of query: 530
length of database: 191,569,459
effective HSP length: 122
effective length of query: 408
effective length of database: 125,736,307
effective search space: 51300413256
effective search space used: 51300413256
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)