Query psy11539
Match_columns 530
No_of_seqs 192 out of 641
Neff 4.9
Searched_HMMs 29240
Date Fri Aug 16 21:05:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11539.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11539hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q6k_A 43.2 kDa salivary prote 100.0 1.9E-87 6.6E-92 702.1 34.8 326 148-528 2-344 (381)
2 2qe8_A Uncharacterized protein 100.0 3.1E-40 1E-44 330.7 28.9 278 181-526 17-311 (343)
3 2p9w_A MAL S 1 allergenic prot 99.5 1.9E-12 6.7E-17 133.5 23.4 263 178-523 10-302 (334)
4 4hw6_A Hypothetical protein, I 99.5 2.2E-12 7.5E-17 135.5 22.6 253 181-529 139-426 (433)
5 2p4o_A Hypothetical protein; p 99.5 2.2E-11 7.7E-16 119.6 27.6 239 181-525 32-278 (306)
6 1q7f_A NHL, brain tumor CG1071 99.4 2.5E-11 8.7E-16 115.5 24.5 237 181-524 30-269 (286)
7 3fvz_A Peptidyl-glycine alpha- 99.4 1.1E-11 3.9E-16 122.5 21.5 265 181-529 24-315 (329)
8 1rwi_B Serine/threonine-protei 99.4 1.8E-11 6.2E-16 114.7 20.8 231 182-529 25-257 (270)
9 1q7f_A NHL, brain tumor CG1071 99.4 5E-11 1.7E-15 113.5 22.4 200 237-526 27-227 (286)
10 2fp8_A Strictosidine synthase; 99.4 8.3E-12 2.8E-16 122.8 17.3 245 181-529 19-306 (322)
11 2qc5_A Streptogramin B lactona 99.4 1.8E-10 6.1E-15 108.5 25.0 230 180-525 19-249 (300)
12 3tc9_A Hypothetical hydrolase; 99.4 3.2E-11 1.1E-15 126.3 20.7 252 181-529 137-423 (430)
13 3hrp_A Uncharacterized protein 99.3 1.7E-10 5.9E-15 119.5 24.8 203 238-529 129-347 (409)
14 3dsm_A Uncharacterized protein 99.3 7E-10 2.4E-14 110.2 27.1 229 181-523 44-285 (328)
15 1ijq_A LDL receptor, low-densi 99.3 3.9E-10 1.3E-14 112.4 23.3 197 239-529 29-231 (316)
16 3hrp_A Uncharacterized protein 99.3 4.1E-10 1.4E-14 116.7 23.5 253 181-529 131-403 (409)
17 3v64_C Agrin; beta propeller, 99.3 5.4E-10 1.9E-14 113.4 23.9 195 238-529 71-268 (349)
18 2z2n_A Virginiamycin B lyase; 99.3 1.7E-09 5.7E-14 101.7 25.0 231 180-526 14-245 (299)
19 3v65_B Low-density lipoprotein 99.3 6.3E-10 2.2E-14 114.4 23.3 195 238-529 114-311 (386)
20 2qc5_A Streptogramin B lactona 99.2 9.3E-10 3.2E-14 103.5 21.9 190 239-526 19-208 (300)
21 1rwi_B Serine/threonine-protei 99.2 2.7E-10 9.2E-15 106.7 18.2 188 241-527 25-213 (270)
22 2z2n_A Virginiamycin B lyase; 99.2 4.3E-09 1.5E-13 98.9 25.4 231 181-528 57-288 (299)
23 4hw6_A Hypothetical protein, I 99.2 3.6E-10 1.2E-14 118.7 18.9 203 235-529 134-367 (433)
24 1npe_A Nidogen, entactin; glyc 99.2 2.4E-09 8.3E-14 102.2 22.0 192 239-528 35-230 (267)
25 3tc9_A Hypothetical hydrolase; 99.2 9E-10 3.1E-14 115.3 19.1 202 235-529 132-364 (430)
26 3p5b_L Low density lipoprotein 99.2 3.4E-09 1.1E-13 109.8 23.0 198 238-529 110-313 (400)
27 3sov_A LRP-6, low-density lipo 99.2 4.8E-09 1.6E-13 105.7 23.4 196 238-529 33-231 (318)
28 3kya_A Putative phosphatase; s 99.2 1.8E-09 6.1E-14 116.7 21.0 228 235-529 134-403 (496)
29 3e5z_A Putative gluconolactona 99.1 7.9E-09 2.7E-13 99.2 23.1 227 180-522 27-274 (296)
30 3fvz_A Peptidyl-glycine alpha- 99.1 8.8E-10 3E-14 108.9 16.6 185 238-490 22-230 (329)
31 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 1.3E-09 4.3E-14 104.1 16.3 245 181-524 18-287 (314)
32 2dg1_A DRP35, lactonase; beta 99.1 4.4E-09 1.5E-13 102.0 19.4 242 181-523 45-298 (333)
33 3kya_A Putative phosphatase; s 99.1 1.9E-09 6.6E-14 116.4 18.6 269 182-529 140-468 (496)
34 3g4e_A Regucalcin; six bladed 99.1 4.7E-09 1.6E-13 102.2 18.7 237 179-525 11-262 (297)
35 3m0c_C LDL receptor, low-densi 99.1 1.1E-08 3.8E-13 115.8 23.4 199 238-529 422-625 (791)
36 1ijq_A LDL receptor, low-densi 99.1 6.1E-08 2.1E-12 96.5 25.9 228 178-516 27-260 (316)
37 3dsm_A Uncharacterized protein 99.0 1.9E-08 6.4E-13 99.9 21.8 207 179-491 82-305 (328)
38 1npe_A Nidogen, entactin; glyc 99.0 1.9E-07 6.5E-12 89.0 26.8 221 182-517 37-262 (267)
39 3vgz_A Uncharacterized protein 99.0 1.3E-07 4.5E-12 90.9 25.1 239 182-523 42-290 (353)
40 2fp8_A Strictosidine synthase; 99.0 2.5E-08 8.7E-13 97.9 19.9 199 238-525 17-248 (322)
41 3dr2_A Exported gluconolactona 99.0 2.7E-08 9.4E-13 96.9 19.7 186 241-523 87-295 (305)
42 1n7d_A LDL receptor, low-densi 99.0 4.2E-09 1.5E-13 117.1 15.5 196 239-529 405-607 (699)
43 2dg1_A DRP35, lactonase; beta 99.0 6.1E-08 2.1E-12 93.9 21.7 197 239-526 44-253 (333)
44 3e5z_A Putative gluconolactona 99.0 5.8E-08 2E-12 93.1 21.1 190 238-523 26-235 (296)
45 3v64_C Agrin; beta propeller, 98.9 1.3E-07 4.5E-12 95.8 23.5 219 182-515 74-296 (349)
46 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 3.2E-08 1.1E-12 94.4 17.6 201 238-527 16-247 (314)
47 3sre_A PON1, serum paraoxonase 98.9 3.4E-08 1.1E-12 102.4 19.1 268 182-529 51-351 (355)
48 2p4o_A Hypothetical protein; p 98.9 1.1E-07 3.6E-12 93.4 21.3 200 240-527 32-233 (306)
49 3vgz_A Uncharacterized protein 98.9 1.4E-06 4.6E-11 83.8 28.5 239 182-524 90-333 (353)
50 4a0p_A LRP6, LRP-6, low-densit 98.9 1.3E-07 4.3E-12 104.3 22.9 193 238-529 35-230 (628)
51 3g4e_A Regucalcin; six bladed 98.9 1.6E-07 5.6E-12 91.2 21.2 194 238-526 11-219 (297)
52 3s94_A LRP-6, low-density lipo 98.9 3.6E-07 1.2E-11 100.4 26.4 196 237-529 346-544 (619)
53 2ghs_A AGR_C_1268P; regucalcin 98.9 1.1E-07 3.7E-12 94.3 19.5 233 180-524 48-291 (326)
54 3p5b_L Low density lipoprotein 98.8 6.2E-07 2.1E-11 92.8 25.0 229 178-515 109-341 (400)
55 3qqz_A Putative uncharacterize 98.8 2.7E-07 9.2E-12 91.5 21.2 210 240-528 27-246 (255)
56 3v65_B Low-density lipoprotein 98.8 1.7E-07 5.8E-12 96.3 20.4 152 300-529 116-270 (386)
57 3s94_A LRP-6, low-density lipo 98.8 2.5E-07 8.4E-12 101.8 22.3 197 237-529 37-236 (619)
58 3sov_A LRP-6, low-density lipo 98.8 5.9E-07 2E-11 90.4 22.2 220 183-516 37-260 (318)
59 1n7d_A LDL receptor, low-densi 98.8 1.3E-07 4.5E-12 105.2 18.9 227 179-516 404-636 (699)
60 2qe8_A Uncharacterized protein 98.8 3E-07 1E-11 91.6 19.5 221 240-529 17-271 (343)
61 3m0c_C LDL receptor, low-densi 98.8 1.4E-06 4.6E-11 98.9 27.1 227 179-515 422-653 (791)
62 2iwa_A Glutamine cyclotransfer 98.8 1.4E-06 4.6E-11 87.1 23.1 191 241-523 22-224 (266)
63 4a0p_A LRP6, LRP-6, low-densit 98.7 5.7E-07 1.9E-11 99.1 21.8 199 239-529 339-542 (628)
64 3dr2_A Exported gluconolactona 98.6 2.9E-06 9.8E-11 82.6 18.2 191 237-523 42-256 (305)
65 3u4y_A Uncharacterized protein 98.6 7.8E-06 2.7E-10 78.4 20.9 221 190-523 9-239 (331)
66 2ghs_A AGR_C_1268P; regucalcin 98.5 1.3E-05 4.3E-10 79.4 22.2 191 239-525 48-249 (326)
67 3hfq_A Uncharacterized protein 98.5 3.5E-05 1.2E-09 74.9 23.8 173 239-486 140-318 (347)
68 3nol_A Glutamine cyclotransfer 98.5 1.4E-05 4.9E-10 79.9 20.9 189 240-522 43-242 (262)
69 2ism_A Putative oxidoreductase 98.4 1.8E-05 6.3E-10 80.3 21.5 223 237-529 28-290 (352)
70 3mbr_X Glutamine cyclotransfer 98.4 3.4E-05 1.2E-09 76.3 22.3 189 240-522 21-221 (243)
71 3hfq_A Uncharacterized protein 98.4 2.3E-05 7.9E-10 76.2 20.6 253 179-524 38-305 (347)
72 3u4y_A Uncharacterized protein 98.4 2.6E-05 8.8E-10 74.7 20.4 206 185-489 44-254 (331)
73 3bws_A Protein LP49; two-domai 98.4 0.00028 9.7E-09 70.1 27.1 126 182-342 124-250 (433)
74 3scy_A Hypothetical bacterial 98.3 0.00016 5.6E-09 70.7 24.1 216 181-486 100-338 (361)
75 3a9g_A Putative uncharacterize 98.3 6E-05 2.1E-09 76.8 21.7 219 237-529 26-289 (354)
76 1ri6_A Putative isomerase YBHE 98.3 0.0001 3.5E-09 70.0 21.9 164 241-486 39-208 (343)
77 1jmx_B Amine dehydrogenase; ox 98.3 1.9E-05 6.5E-10 75.4 16.0 122 183-337 2-136 (349)
78 3qqz_A Putative uncharacterize 98.3 6.7E-05 2.3E-09 74.3 20.4 212 183-486 29-252 (255)
79 3nok_A Glutaminyl cyclase; bet 98.3 3.6E-05 1.2E-09 77.2 18.2 185 241-522 56-252 (268)
80 3a9g_A Putative uncharacterize 98.3 0.00014 4.7E-09 74.2 22.9 271 181-524 29-330 (354)
81 1l0q_A Surface layer protein; 98.3 0.00015 5.1E-09 71.1 22.4 153 242-486 34-188 (391)
82 1l0q_A Surface layer protein; 98.2 0.00019 6.4E-09 70.4 22.7 194 182-486 33-232 (391)
83 1jmx_B Amine dehydrogenase; ox 98.2 0.00028 9.7E-09 67.3 23.3 160 245-488 5-176 (349)
84 2ism_A Putative oxidoreductase 98.2 5.5E-05 1.9E-09 76.7 19.3 263 181-525 31-334 (352)
85 1ri6_A Putative isomerase YBHE 98.1 0.00011 3.8E-09 69.7 18.0 202 241-522 85-294 (343)
86 3c75_H MADH, methylamine dehyd 98.1 0.00014 4.8E-09 76.9 20.5 129 189-340 83-214 (426)
87 2iwa_A Glutamine cyclotransfer 98.1 0.00025 8.6E-09 70.7 21.2 207 180-486 20-236 (266)
88 3no2_A Uncharacterized protein 98.1 0.00024 8.3E-09 69.3 20.5 190 241-524 38-231 (276)
89 3scy_A Hypothetical bacterial 98.1 0.00051 1.8E-08 67.2 21.2 214 241-524 51-278 (361)
90 1pby_B Quinohemoprotein amine 98.0 0.001 3.5E-08 62.8 21.1 82 242-340 36-129 (337)
91 1pby_B Quinohemoprotein amine 98.0 0.0014 4.8E-08 61.9 21.7 130 183-342 36-170 (337)
92 3no2_A Uncharacterized protein 97.9 0.0011 3.8E-08 64.6 21.4 183 251-529 5-188 (276)
93 2g8s_A Glucose/sorbosone dehyd 97.9 0.00023 8E-09 72.3 17.1 84 238-336 16-108 (353)
94 3nok_A Glutaminyl cyclase; bet 97.9 0.00026 8.8E-09 71.1 16.4 151 178-377 93-246 (268)
95 3nol_A Glutamine cyclotransfer 97.9 0.00035 1.2E-08 69.9 16.7 166 179-427 85-253 (262)
96 3bws_A Protein LP49; two-domai 97.9 0.0004 1.4E-08 69.0 16.7 157 244-486 127-291 (433)
97 1nir_A Nitrite reductase; hemo 97.8 0.0017 5.6E-08 69.7 22.2 202 190-489 148-357 (543)
98 3hxj_A Pyrrolo-quinoline quino 97.8 0.001 3.5E-08 63.5 18.6 209 186-522 103-311 (330)
99 3das_A Putative oxidoreductase 97.8 0.0035 1.2E-07 64.7 22.5 227 237-529 29-285 (347)
100 3c75_H MADH, methylamine dehyd 97.7 0.00046 1.6E-08 73.0 15.6 116 251-432 85-211 (426)
101 1cru_A Protein (soluble quinop 97.7 0.00072 2.4E-08 71.6 17.1 87 237-336 24-124 (454)
102 2oiz_A Aromatic amine dehydrog 97.7 0.0016 5.6E-08 65.4 18.8 71 251-340 16-95 (361)
103 3mbr_X Glutamine cyclotransfer 97.7 0.0016 5.5E-08 64.3 18.1 160 284-528 10-172 (243)
104 3sjl_D Methylamine dehydrogena 97.7 0.00032 1.1E-08 73.4 13.8 117 250-432 44-171 (386)
105 1nir_A Nitrite reductase; hemo 97.7 0.0011 3.8E-08 71.0 18.3 184 247-523 145-342 (543)
106 2oiz_A Aromatic amine dehydrog 97.7 0.0068 2.3E-07 60.9 23.1 130 190-341 15-146 (361)
107 1mda_H Methylamine dehydrogena 97.7 0.0016 5.6E-08 67.2 18.2 124 189-335 30-158 (368)
108 2ece_A 462AA long hypothetical 97.5 0.012 4.2E-07 63.1 23.3 86 238-337 136-239 (462)
109 3sre_A PON1, serum paraoxonase 97.5 0.00084 2.9E-08 69.5 13.8 136 176-335 107-252 (355)
110 2p9w_A MAL S 1 allergenic prot 97.5 0.0045 1.5E-07 63.9 18.1 205 245-523 18-252 (334)
111 1jof_A Carboxy-CIS,CIS-muconat 97.5 0.0037 1.3E-07 61.9 17.1 199 241-523 41-273 (365)
112 3sjl_D Methylamine dehydrogena 97.4 0.021 7E-07 59.8 22.0 127 190-340 44-174 (386)
113 2mad_H Methylamine dehydrogena 97.4 0.049 1.7E-06 55.5 24.2 90 244-341 70-162 (373)
114 3hxj_A Pyrrolo-quinoline quino 97.2 0.03 1E-06 53.2 19.8 165 250-522 107-271 (330)
115 1cru_A Protein (soluble quinop 97.2 0.0065 2.2E-07 64.3 16.5 168 301-524 28-246 (454)
116 4a2l_A BT_4663, two-component 97.2 0.011 3.8E-07 65.3 18.8 188 241-522 453-647 (795)
117 3v9f_A Two-component system se 97.2 0.01 3.4E-07 65.5 17.6 188 240-522 450-644 (781)
118 1qks_A Cytochrome CD1 nitrite 97.2 0.032 1.1E-06 60.6 21.4 184 247-523 163-360 (567)
119 4a2l_A BT_4663, two-component 97.1 0.023 7.8E-07 62.8 20.2 195 240-523 406-603 (795)
120 3zwl_B Eukaryotic translation 97.1 0.091 3.1E-06 49.7 21.6 79 240-341 33-111 (369)
121 2g8s_A Glucose/sorbosone dehyd 97.0 0.0071 2.4E-07 61.3 13.9 64 458-525 131-217 (353)
122 2vdu_B TRNA (guanine-N(7)-)-me 97.0 0.022 7.7E-07 57.7 17.2 111 314-486 113-228 (450)
123 1qks_A Cytochrome CD1 nitrite 96.9 0.13 4.4E-06 55.9 23.7 252 179-523 195-521 (567)
124 3amr_A 3-phytase; beta-propell 96.9 0.083 2.9E-06 54.9 21.0 63 457-523 180-250 (355)
125 3das_A Putative oxidoreductase 96.9 0.018 6.1E-07 59.4 16.0 168 300-524 32-220 (347)
126 1fwx_A Nitrous oxide reductase 96.9 0.012 4E-07 65.1 15.4 259 190-521 101-404 (595)
127 1jof_A Carboxy-CIS,CIS-muconat 96.9 0.055 1.9E-06 53.5 18.7 78 240-337 145-228 (365)
128 2mad_H Methylamine dehydrogena 96.9 0.034 1.2E-06 56.7 17.5 68 251-339 33-110 (373)
129 1fwx_A Nitrous oxide reductase 96.8 0.086 3E-06 58.2 21.4 184 251-523 102-348 (595)
130 1gxr_A ESG1, transducin-like e 96.8 0.25 8.5E-06 46.2 21.9 153 241-486 143-295 (337)
131 3v9f_A Two-component system se 96.8 0.033 1.1E-06 61.3 18.1 188 240-522 407-599 (781)
132 1k8k_C P40, ARP2/3 complex 41 96.7 0.13 4.6E-06 49.1 19.1 174 241-486 54-232 (372)
133 1mda_H Methylamine dehydrogena 96.7 0.008 2.7E-07 62.1 10.9 71 250-340 31-110 (368)
134 4h5i_A Guanine nucleotide-exch 96.7 0.21 7.3E-06 49.6 21.0 73 244-339 138-210 (365)
135 2ece_A 462AA long hypothetical 96.3 0.073 2.5E-06 57.1 15.9 144 182-342 139-295 (462)
136 2hqs_A Protein TOLB; TOLB, PAL 96.1 0.79 2.7E-05 46.5 22.0 80 242-342 181-263 (415)
137 1r5m_A SIR4-interacting protei 96.1 0.5 1.7E-05 45.6 19.4 79 241-338 151-239 (425)
138 3ow8_A WD repeat-containing pr 95.9 1.4 4.7E-05 42.8 22.2 58 273-341 144-201 (321)
139 1gxr_A ESG1, transducin-like e 95.9 1.1 3.8E-05 41.7 21.7 81 240-341 98-178 (337)
140 3q6k_A 43.2 kDa salivary prote 95.9 1.1 3.6E-05 46.9 21.8 58 410-476 286-343 (381)
141 3ow8_A WD repeat-containing pr 95.8 1.6 5.3E-05 42.4 23.4 56 273-339 102-157 (321)
142 2ojh_A Uncharacterized protein 95.6 1 3.5E-05 40.7 18.3 81 241-342 43-126 (297)
143 3ott_A Two-component system se 95.6 0.68 2.3E-05 50.7 20.2 203 241-522 325-533 (758)
144 3ott_A Two-component system se 95.4 0.26 9E-06 54.0 16.1 82 240-341 419-508 (758)
145 2ad6_A Methanol dehydrogenase 95.4 3.1 0.00011 44.8 24.3 131 184-342 109-289 (571)
146 1got_B GT-beta; complex (GTP-b 95.4 2.1 7.3E-05 41.4 21.8 57 273-340 164-220 (340)
147 1erj_A Transcriptional repress 95.3 2.5 8.6E-05 41.9 21.8 78 241-341 167-244 (393)
148 4gqb_B Methylosome protein 50; 95.3 1.9 6.5E-05 42.7 20.5 79 241-341 129-207 (344)
149 3vl1_A 26S proteasome regulato 95.3 2.4 8.1E-05 41.4 23.6 80 240-342 140-219 (420)
150 4g56_B MGC81050 protein; prote 95.3 1 3.4E-05 44.4 18.3 76 241-338 141-216 (357)
151 3ei3_B DNA damage-binding prot 95.2 2.4 8.1E-05 41.1 22.2 81 241-342 75-157 (383)
152 1k8k_C P40, ARP2/3 complex 41 95.1 2.3 8E-05 40.3 21.0 75 241-338 10-86 (372)
153 1kv9_A Type II quinohemoprotei 95.1 2.3 7.8E-05 46.6 22.2 93 245-341 235-340 (668)
154 3sfz_A APAF-1, apoptotic pepti 95.1 1.7 5.9E-05 49.5 21.8 81 241-342 659-739 (1249)
155 3dwl_C Actin-related protein 2 95.1 0.13 4.4E-06 49.8 10.8 29 458-486 207-235 (377)
156 4aez_A CDC20, WD repeat-contai 94.9 2.3 7.8E-05 42.0 19.9 138 273-488 239-381 (401)
157 2ojh_A Uncharacterized protein 94.8 1.8 6.3E-05 39.0 17.4 57 273-342 22-79 (297)
158 1yiq_A Quinohemoprotein alcoho 94.8 3.8 0.00013 45.1 23.0 95 244-342 239-346 (689)
159 3zwl_B Eukaryotic translation 94.7 2.9 0.0001 39.2 20.7 78 241-341 177-255 (369)
160 4a11_B DNA excision repair pro 94.6 3.3 0.00011 39.6 21.7 56 274-338 123-178 (408)
161 2pbi_B Guanine nucleotide-bind 94.6 3.8 0.00013 40.1 21.3 62 460-528 288-349 (354)
162 2xyi_A Probable histone-bindin 94.5 0.95 3.3E-05 45.6 16.1 59 274-336 205-264 (430)
163 1sq9_A Antiviral protein SKI8; 94.5 1.4 4.9E-05 42.5 16.7 29 458-486 293-321 (397)
164 3ei3_B DNA damage-binding prot 94.4 3.9 0.00013 39.6 21.0 29 458-486 252-281 (383)
165 4gqb_B Methylosome protein 50; 94.2 2.5 8.5E-05 41.8 18.2 81 242-342 85-165 (344)
166 3iz6_a 40S ribosomal protein R 94.0 5.1 0.00017 39.4 19.9 28 459-486 301-328 (380)
167 2pm9_A Protein WEB1, protein t 93.8 1.2 4E-05 43.2 14.6 29 458-486 264-293 (416)
168 3dw8_B Serine/threonine-protei 93.8 3.7 0.00013 40.2 18.3 81 241-338 179-261 (447)
169 3mkq_A Coatomer beta'-subunit; 93.7 3.4 0.00012 44.4 19.1 77 241-340 15-91 (814)
170 1kb0_A Quinohemoprotein alcoho 93.6 9.8 0.00034 41.7 23.2 97 244-342 247-354 (677)
171 1got_B GT-beta; complex (GTP-b 93.5 5.7 0.00019 38.3 19.2 74 240-336 56-129 (340)
172 1pgu_A Actin interacting prote 93.3 2.3 8E-05 43.4 16.5 72 241-336 20-98 (615)
173 2z3z_A Dipeptidyl aminopeptida 93.3 4.8 0.00017 42.8 19.4 76 240-342 82-162 (706)
174 3pe7_A Oligogalacturonate lyas 93.2 1.3 4.5E-05 42.8 13.7 61 273-342 168-232 (388)
175 1vyh_C Platelet-activating fac 93.2 7.6 0.00026 38.8 21.3 78 241-341 194-271 (410)
176 1erj_A Transcriptional repress 93.1 7.4 0.00025 38.4 21.5 83 242-342 67-161 (393)
177 2pm9_A Protein WEB1, protein t 93.0 3.3 0.00011 40.0 16.2 80 241-336 167-250 (416)
178 2aq5_A Coronin-1A; WD40 repeat 93.0 7.4 0.00025 38.1 21.6 80 240-341 82-169 (402)
179 2ecf_A Dipeptidyl peptidase IV 92.9 2.9 0.0001 44.7 17.1 84 240-336 37-139 (741)
180 3o4h_A Acylamino-acid-releasin 92.8 4.6 0.00016 42.1 18.1 22 464-485 253-274 (582)
181 4aow_A Guanine nucleotide-bind 92.6 3.1 0.00011 38.9 15.1 57 273-340 195-251 (340)
182 3lrv_A PRE-mRNA-splicing facto 92.4 8 0.00027 37.2 19.4 61 274-342 105-165 (343)
183 3i2n_A WD repeat-containing pr 92.3 3.5 0.00012 38.7 15.1 63 274-339 140-203 (357)
184 3s25_A Hypothetical 7-bladed b 92.3 3.5 0.00012 41.0 15.7 124 184-344 18-147 (302)
185 2z3z_A Dipeptidyl aminopeptida 92.2 2.1 7.3E-05 45.5 14.9 60 275-342 46-117 (706)
186 3dm0_A Maltose-binding peripla 92.2 11 0.00036 40.5 20.4 79 241-342 432-510 (694)
187 4ery_A WD repeat-containing pr 92.1 7.8 0.00027 36.3 22.8 76 242-340 110-185 (312)
188 4ery_A WD repeat-containing pr 92.1 7.9 0.00027 36.3 23.3 78 240-340 24-101 (312)
189 3frx_A Guanine nucleotide-bind 92.0 2.1 7.1E-05 41.2 13.3 141 273-486 176-316 (319)
190 3s25_A Hypothetical 7-bladed b 92.0 10 0.00035 37.5 18.9 55 273-342 129-183 (302)
191 1k32_A Tricorn protease; prote 92.0 19 0.00064 41.0 23.0 61 273-342 400-468 (1045)
192 2xyi_A Probable histone-bindin 91.6 4.5 0.00015 40.6 15.8 170 241-486 233-409 (430)
193 2hqs_A Protein TOLB; TOLB, PAL 91.5 13 0.00044 37.5 20.0 60 273-342 159-219 (415)
194 3gre_A Serine/threonine-protei 91.4 7.6 0.00026 38.2 16.9 59 273-340 192-250 (437)
195 2vdu_B TRNA (guanine-N(7)-)-me 91.3 7.5 0.00026 39.0 17.1 76 241-337 104-182 (450)
196 3k26_A Polycomb protein EED; W 91.3 9.6 0.00033 35.7 22.3 59 274-342 96-154 (366)
197 3jrp_A Fusion protein of prote 91.3 9.9 0.00034 35.8 17.3 29 458-486 208-239 (379)
198 3vu4_A KMHSV2; beta-propeller 91.2 12 0.0004 36.6 20.9 29 458-486 242-270 (355)
199 3o4h_A Acylamino-acid-releasin 91.2 11 0.00038 39.2 18.7 28 314-342 121-148 (582)
200 3jrp_A Fusion protein of prote 90.8 11 0.00037 35.5 20.3 77 240-337 12-90 (379)
201 1nr0_A Actin interacting prote 90.7 19 0.00064 38.1 20.9 29 458-486 493-521 (611)
202 3dwl_C Actin-related protein 2 90.6 1.6 5.5E-05 42.0 10.9 29 458-486 148-176 (377)
203 4a11_B DNA excision repair pro 89.8 14 0.00048 35.1 18.8 29 458-486 188-217 (408)
204 3mkq_A Coatomer beta'-subunit; 89.7 24 0.00082 37.7 21.6 72 242-337 58-130 (814)
205 1w6s_A Methanol dehydrogenase 89.5 23 0.00077 38.7 20.1 69 274-343 74-149 (599)
206 3mmy_A MRNA export factor; mRN 89.3 14 0.00048 34.5 18.1 61 459-526 276-336 (368)
207 3vu4_A KMHSV2; beta-propeller 89.2 17 0.00059 35.4 19.7 75 241-340 21-95 (355)
208 1r5m_A SIR4-interacting protei 89.0 16 0.00056 34.8 20.0 29 458-486 249-277 (425)
209 3fm0_A Protein CIAO1; WDR39,SG 88.9 17 0.0006 35.0 19.1 28 459-486 153-180 (345)
210 1sq9_A Antiviral protein SKI8; 88.8 17 0.00058 34.8 21.2 29 457-486 187-215 (397)
211 1vyh_C Platelet-activating fac 88.6 21 0.00071 35.6 20.2 78 240-340 109-186 (410)
212 3vl1_A 26S proteasome regulato 88.4 19 0.00064 34.9 20.5 84 241-340 183-283 (420)
213 3i2n_A WD repeat-containing pr 88.3 13 0.00044 34.8 15.1 29 458-486 211-242 (357)
214 1w6s_A Methanol dehydrogenase 88.2 33 0.0011 37.4 23.4 68 273-342 278-350 (599)
215 2ynn_A Coatomer subunit beta'; 88.0 18 0.00062 34.1 20.7 77 241-340 15-91 (304)
216 4aez_A CDC20, WD repeat-contai 87.8 22 0.00075 34.8 19.7 29 458-486 305-335 (401)
217 4e54_B DNA damage-binding prot 87.7 11 0.00036 37.8 14.9 61 274-342 143-203 (435)
218 3q7m_A Lipoprotein YFGL, BAMB; 87.6 2.9 9.8E-05 40.9 10.4 74 250-343 53-131 (376)
219 1yfq_A Cell cycle arrest prote 87.6 11 0.00039 35.1 14.1 29 458-486 253-281 (342)
220 3lrv_A PRE-mRNA-splicing facto 87.4 21 0.00071 34.2 19.2 55 274-338 150-204 (343)
221 4g56_B MGC81050 protein; prote 86.8 13 0.00046 36.3 14.8 82 241-342 96-177 (357)
222 3frx_A Guanine nucleotide-bind 86.8 22 0.00076 33.8 21.1 78 241-341 67-144 (319)
223 3iz6_a 40S ribosomal protein R 86.7 25 0.00085 34.4 19.7 29 458-486 251-279 (380)
224 3pe7_A Oligogalacturonate lyas 86.4 6.6 0.00022 37.8 12.0 65 274-343 265-337 (388)
225 2pbi_B Guanine nucleotide-bind 86.3 19 0.00065 35.1 15.5 58 273-341 220-277 (354)
226 3c5m_A Oligogalacturonate lyas 86.3 24 0.00081 33.7 17.1 62 271-341 166-231 (396)
227 1flg_A Protein (quinoprotein e 86.2 40 0.0014 36.3 25.2 69 273-342 291-363 (582)
228 2aq5_A Coronin-1A; WD40 repeat 86.2 19 0.00063 35.2 15.4 29 458-486 133-162 (402)
229 3fm0_A Protein CIAO1; WDR39,SG 86.0 25 0.00087 33.8 16.7 28 458-485 196-223 (345)
230 3q7m_A Lipoprotein YFGL, BAMB; 85.6 27 0.00094 33.8 29.9 116 185-343 48-171 (376)
231 4ggc_A P55CDC, cell division c 85.4 20 0.00069 32.8 14.5 60 274-342 46-105 (318)
232 3sfz_A APAF-1, apoptotic pepti 85.4 10 0.00035 43.2 14.7 29 458-486 1087-1115(1249)
233 2ynn_A Coatomer subunit beta'; 84.5 27 0.00093 32.9 20.2 54 273-337 77-130 (304)
234 2ad6_A Methanol dehydrogenase 84.4 47 0.0016 35.5 27.3 67 273-342 272-343 (571)
235 1xfd_A DIP, dipeptidyl aminope 84.2 33 0.0011 36.2 17.3 63 274-342 38-107 (723)
236 3v7d_B Cell division control p 84.1 35 0.0012 33.7 18.6 57 274-342 143-199 (464)
237 4e54_B DNA damage-binding prot 84.1 15 0.00051 36.7 13.8 28 459-486 299-326 (435)
238 3dm0_A Maltose-binding peripla 83.8 49 0.0017 35.2 18.7 58 273-341 405-467 (694)
239 4a9v_A PHOX; hydrolase, beta-p 83.6 1.2 4E-05 49.2 5.7 118 237-377 381-542 (592)
240 1tl2_A L10, protein (tachylect 83.2 4.4 0.00015 39.9 9.1 71 447-523 79-152 (236)
241 2wg3_C Hedgehog-interacting pr 82.9 23 0.00079 37.4 15.3 72 238-323 12-91 (463)
242 3k26_A Polycomb protein EED; W 82.8 15 0.00052 34.3 12.6 29 458-486 117-146 (366)
243 2xzm_R RACK1; ribosome, transl 82.3 27 0.00094 33.4 14.5 35 301-340 78-112 (343)
244 3jro_A Fusion protein of prote 82.3 41 0.0014 36.7 17.5 20 467-486 169-188 (753)
245 3jro_A Fusion protein of prote 82.2 31 0.0011 37.7 16.5 29 458-486 206-237 (753)
246 2gop_A Trilobed protease; beta 81.7 23 0.00079 33.4 13.5 37 300-341 15-58 (347)
247 1pgu_A Actin interacting prote 81.0 51 0.0017 33.4 20.6 55 271-338 425-479 (615)
248 1yfq_A Cell cycle arrest prote 80.9 36 0.0012 31.6 16.2 77 241-341 13-95 (342)
249 2wg3_C Hedgehog-interacting pr 80.8 8.3 0.00028 40.8 10.9 29 459-488 141-186 (463)
250 3iuj_A Prolyl endopeptidase; h 80.8 67 0.0023 34.7 23.8 78 238-336 127-218 (693)
251 1nr0_A Actin interacting prote 80.3 39 0.0013 35.6 16.0 69 244-336 23-91 (611)
252 1k32_A Tricorn protease; prote 79.0 30 0.001 39.3 15.4 26 315-342 349-375 (1045)
253 4gga_A P55CDC, cell division c 79.0 52 0.0018 32.4 20.1 60 274-342 126-185 (420)
254 2ecf_A Dipeptidyl peptidase IV 78.3 42 0.0014 35.7 15.5 18 326-343 64-81 (741)
255 1xfd_A DIP, dipeptidyl aminope 77.4 42 0.0014 35.5 15.1 65 274-342 229-296 (723)
256 3dw8_B Serine/threonine-protei 77.3 55 0.0019 31.8 17.9 31 458-488 228-259 (447)
257 2xdw_A Prolyl endopeptidase; a 77.1 84 0.0029 33.7 23.4 78 241-337 126-219 (710)
258 4a9v_A PHOX; hydrolase, beta-p 75.5 9.4 0.00032 42.2 9.6 76 237-322 473-549 (592)
259 4h5i_A Guanine nucleotide-exch 75.0 65 0.0022 31.5 14.9 32 458-490 314-345 (365)
260 3azo_A Aminopeptidase; POP fam 74.6 87 0.003 32.7 16.6 28 459-486 244-273 (662)
261 3amr_A 3-phytase; beta-propell 74.3 12 0.0004 38.8 9.5 76 241-334 181-262 (355)
262 1kb0_A Quinohemoprotein alcoho 73.9 9.2 0.00032 41.9 9.1 122 187-343 74-208 (677)
263 4a5s_A Dipeptidyl peptidase 4 73.8 37 0.0013 36.8 13.8 140 170-343 9-149 (740)
264 1z68_A Fibroblast activation p 73.5 16 0.00055 38.9 10.7 58 275-338 38-102 (719)
265 3c5m_A Oligogalacturonate lyas 73.5 57 0.002 30.9 13.7 81 240-342 238-336 (396)
266 4a5s_A Dipeptidyl peptidase 4 72.9 1.1E+02 0.0037 33.1 20.4 65 274-342 37-108 (740)
267 2ymu_A WD-40 repeat protein; u 72.8 85 0.0029 31.8 21.5 31 458-489 510-540 (577)
268 2xzm_R RACK1; ribosome, transl 72.7 67 0.0023 30.6 20.9 74 241-337 78-151 (343)
269 2ymu_A WD-40 repeat protein; u 72.5 86 0.0029 31.7 21.0 31 458-489 469-499 (577)
270 3odt_A Protein DOA1; ubiquitin 72.2 56 0.0019 29.6 12.8 74 242-340 187-260 (313)
271 2gop_A Trilobed protease; beta 72.0 35 0.0012 32.1 11.6 85 239-342 14-101 (347)
272 3hx6_A Type 4 fimbrial biogene 71.4 7.1 0.00024 43.0 7.3 64 271-336 221-285 (570)
273 4ggc_A P55CDC, cell division c 70.1 65 0.0022 29.4 20.3 41 241-293 69-109 (318)
274 2hz6_A Endoplasmic reticulum t 69.0 8 0.00028 38.6 6.7 68 250-343 9-77 (369)
275 1yiq_A Quinohemoprotein alcoho 68.8 23 0.0008 38.8 10.9 120 187-342 67-200 (689)
276 2oit_A Nucleoporin 214KDA; NH2 68.7 94 0.0032 31.6 14.8 29 458-486 151-180 (434)
277 3f3f_A Nucleoporin SEH1; struc 65.2 80 0.0027 28.6 19.7 29 458-486 216-248 (351)
278 3odt_A Protein DOA1; ubiquitin 64.9 23 0.00079 32.3 8.5 72 241-337 227-298 (313)
279 1flg_A Protein (quinoprotein e 64.7 28 0.00097 37.5 10.4 62 274-342 79-144 (582)
280 1kv9_A Type II quinohemoprotei 63.9 35 0.0012 37.2 11.0 120 187-343 63-196 (668)
281 3s9j_A Member of DUF4221 famil 62.0 12 0.00039 38.9 6.4 78 247-342 36-117 (369)
282 2oaj_A Protein SNI1; WD40 repe 57.4 2.5E+02 0.0084 31.6 19.2 72 241-338 60-132 (902)
283 3zwu_A Alkaline phosphatase PH 51.5 19 0.00065 39.6 6.2 66 457-522 384-492 (592)
284 2xdw_A Prolyl endopeptidase; a 51.0 2.6E+02 0.0087 29.9 16.3 27 314-340 136-165 (710)
285 3azo_A Aminopeptidase; POP fam 50.3 2.4E+02 0.0081 29.4 18.8 84 240-336 130-228 (662)
286 2pm7_B Protein transport prote 49.4 1.6E+02 0.0056 27.2 12.7 178 274-529 78-278 (297)
287 2bkl_A Prolyl endopeptidase; m 49.2 2.7E+02 0.0093 29.7 22.7 80 240-337 121-213 (695)
288 3gre_A Serine/threonine-protei 48.6 65 0.0022 31.4 9.1 63 274-342 237-299 (437)
289 2oaj_A Protein SNI1; WD40 repe 46.6 3.6E+02 0.012 30.3 20.1 73 241-338 19-91 (902)
290 2ovr_B FBW7, F-BOX/WD repeat p 44.2 1E+02 0.0034 30.4 9.8 60 273-342 339-398 (445)
291 3sbq_A Nitrous-oxide reductase 42.6 50 0.0017 36.8 7.6 77 404-486 328-407 (638)
292 1p22_A F-BOX/WD-repeat protein 40.9 2.7E+02 0.0092 27.3 18.5 56 274-342 154-209 (435)
293 3f3f_A Nucleoporin SEH1; struc 40.6 2E+02 0.007 25.8 21.3 76 240-336 12-91 (351)
294 3bg1_A Protein SEC13 homolog; 39.8 2.4E+02 0.0082 26.4 15.2 63 273-342 81-143 (316)
295 1yr2_A Prolyl oligopeptidase; 38.2 4.1E+02 0.014 28.6 21.4 39 240-287 163-203 (741)
296 2oit_A Nucleoporin 214KDA; NH2 36.8 2.9E+02 0.0099 27.8 12.1 29 458-486 194-222 (434)
297 4gq1_A NUP37; propeller, trans 34.4 3.3E+02 0.011 26.4 14.8 163 274-486 112-285 (393)
298 3bg1_A Protein SEC13 homolog; 33.6 3E+02 0.01 25.7 13.9 78 241-337 15-92 (316)
299 4aow_A Guanine nucleotide-bind 31.7 3E+02 0.01 25.1 16.0 60 274-342 62-124 (340)
300 2w18_A PALB2, fancn, partner a 27.7 5.1E+02 0.017 26.5 17.9 64 271-342 155-219 (356)
301 4fp5_D LT-IIB, heat-labIle ent 27.5 63 0.0021 26.9 4.1 33 316-349 23-57 (98)
302 3v7d_B Cell division control p 26.9 4.5E+02 0.015 25.6 22.2 55 274-337 184-238 (464)
303 1qb5_D Protein (heat labIle en 26.8 64 0.0022 26.9 4.0 34 315-349 22-57 (99)
304 3l48_A Outer membrane usher pr 26.0 79 0.0027 26.4 4.6 29 314-342 41-69 (94)
305 4gga_A P55CDC, cell division c 26.0 1.6E+02 0.0053 28.9 7.6 22 466-489 115-136 (420)
306 2hz6_A Endoplasmic reticulum t 25.2 21 0.0007 35.6 1.0 55 273-342 102-157 (369)
307 3zwu_A Alkaline phosphatase PH 22.1 3.4E+02 0.011 29.7 9.9 56 237-293 473-529 (592)
308 1tl2_A L10, protein (tachylect 21.6 2E+02 0.0069 28.1 7.2 74 446-527 31-107 (236)
309 2ovr_B FBW7, F-BOX/WD repeat p 21.4 5.7E+02 0.019 24.8 19.4 57 273-342 259-315 (445)
No 1
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=100.00 E-value=1.9e-87 Score=702.08 Aligned_cols=326 Identities=24% Similarity=0.458 Sum_probs=304.3
Q ss_pred ceEEEEEeeeeeecCChHHHHhhhcCCCcccCCCceeeeEE--eCCeEEEEccCCCCCCCcEEEEEECCCCC----CCCc
Q psy11539 148 FQVVFRWKIMDFVFRDNKQKVNLIRSNKFIPENNLPLGIGI--WRSTIFLSFPKWKAGIPFTLASFNMNDPS----ESPI 221 (530)
Q Consensus 148 l~~vy~Wk~ldf~~p~~~~r~~ai~sg~Yip~n~iP~GV~v--~~gRlFVTiPR~~~GvP~TLa~V~~~~~~----~sP~ 221 (530)
++++||||+|||+ ||.+|+|+|+|++|+||++ ++||+|||+|||+.|+|+||++|.....+ .+|+
T Consensus 2 ~~~~~~Wk~ld~~---------ai~~g~y~p~n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ 72 (381)
T 3q6k_A 2 DTQGYKWKQLLYN---------NVTPGSYNPDNMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSP 72 (381)
T ss_dssp CCEEEEESSCCBT---------TSCTTSSCGGGCCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSC
T ss_pred cceEEEEEeeccc---------cccCCCcccCccceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcc
Confidence 6899999999997 9999999999999999999 79999999999999999999999864322 3788
Q ss_pred c-CCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeCCCCCcccCccc---cCCCEEEEEECCCC--cEEEEEECCCcc
Q psy11539 222 L-LPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQ---LCPPKIMVFDLKTN--TLIRKYILPTAQ 295 (530)
Q Consensus 222 L-~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~---~c~PKLvvfDL~Td--~li~~y~~P~~v 295 (530)
| +|||+| ++|++|+||++++||+||||||||+|.++..+.+.+ .|+|||++|||+|| +++++|.||+++
T Consensus 73 ll~PYP~w-----~~~~~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~ 147 (381)
T 3q6k_A 73 LLNKFSGH-----KTGKELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRL 147 (381)
T ss_dssp CBEECTTC-----SSSCSSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGG
T ss_pred cccCCCCC-----ccccceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHh
Confidence 8 999998 489999999999999999999999999998887778 99999999999999 999999999999
Q ss_pred cccCccccceEEEeec---CCCCeEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCcccee
Q psy11539 296 VFEGSLFSNIVTEVVE---DCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMA 372 (530)
Q Consensus 296 ~~~~S~lndIvVDv~~---~c~~~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIA 372 (530)
++++|+|+||+||+.. +|+++||||||++.+||||||+++|++|||+|++|+|| .++.|+|+|++|+|.+|++|||
T Consensus 148 ~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd-~~~~~~i~G~~~~~~~Gi~gIa 226 (381)
T 3q6k_A 148 VEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAE-RPTKFDYGGKEYEFKAGIFGIT 226 (381)
T ss_dssp CCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCC-SCEEEEETTEEEEECCCEEEEE
T ss_pred cccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccc-cCcceEECCEEeEeccCceEEE
Confidence 9999999999999653 79999999999999999999999999999999999999 6789999999999999999999
Q ss_pred cCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEecc
Q psy11539 373 ISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGS 452 (530)
Q Consensus 373 Lsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~ 452 (530)
|||++ .+++|+||||||+|++||+|+|++|+++++ ..+|+.+|+
T Consensus 227 Lsp~~-----------------------------~~~~~~LYf~plss~~ly~V~T~~L~~~~~-------~~~v~~~G~ 270 (381)
T 3q6k_A 227 LGDRD-----------------------------SEGNRPAYYLAGSAIKVYSVNTKELKQKGG-------KLNPELLGN 270 (381)
T ss_dssp ECCCC-----------------------------TTSCCEEEEEESSCSEEEEEEHHHHSSTTC-------CCCCEEEEE
T ss_pred ecCCc-----------------------------CCCCeEEEEEECCCCcEEEEEHHHhhCcch-------hhceEEeee
Confidence 99985 456799999999999999999999999875 458999999
Q ss_pred ccCCCCCcceEEc-CCCcEEEEccCCCeEEEEeCCCC-ccccCceeEEeecCCceeecceeEEecCCcEEEEEeecee
Q psy11539 453 RFKNTQASASAIN-SNGVMFYNLVTKHSVGCWNTKTK-VYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKY 528 (530)
Q Consensus 453 rG~~sqs~G~aiD-~~G~LYft~~~~~aI~cWnt~~~-~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~ 528 (530)
||.++|+.|+++| ++|+|||+++++++|+|||++ + +|+++|+++|++++ +|+||++++|+.+|+||| ++||+
T Consensus 271 kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~-~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv--~sn~l 344 (381)
T 3q6k_A 271 RGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQ-KMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWF--MSNGF 344 (381)
T ss_dssp CCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETT-SCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEEE--EECSC
T ss_pred cCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCC-CCccccCceEEEEECC-CccccCeEEECCCCeEEE--EECcc
Confidence 9878899999998 999999999999999999999 8 99999999999977 999999999999997766 78875
No 2
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=3.1e-40 Score=330.68 Aligned_cols=278 Identities=18% Similarity=0.311 Sum_probs=236.5
Q ss_pred CceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeCC
Q psy11539 181 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTG 259 (530)
Q Consensus 181 ~iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDtG 259 (530)
..|.||+++ +||+||+.|||..|+ ++|.+++ . + .+.|||+|+. ..|..|.+|++|.+|+||+|||+|+|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~-~~l~~~~-~--g---~~~~~p~~~~---~~~~~~~~p~gv~~d~~g~L~v~D~g 86 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPE-MQVAELT-Q--D---GLIPFPPQSG---NAIITFDTVLGIKSDGNGIVWMLDNG 86 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCS-CSEEEEE-T--T---EEEESCCCCS---SCCCCCSCEEEEEECSSSEEEEEECH
T ss_pred CCcceEEECCCCCEEEEeCCCCCCc-eEEEEEC-C--C---CeecCCCccc---CcccceeEeeEEEEcCCCcEEEEcCC
Confidence 589999998 899999999998887 8999998 2 2 6889999873 25788999999999999999999998
Q ss_pred CCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecC---CCCeEEEEEccCC
Q psy11539 260 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV---FRYGLIVYDFFKN 336 (530)
Q Consensus 260 ~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs---g~~gLIVyDl~~g 336 (530)
. .+.|.++|++||++++++++++.+|..+....+++++|+|| .+++++||+|. +.++|+|||+.++
T Consensus 87 ~-------~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd----~~~g~~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 87 N-------QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVD----LIHNFVYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp H-------HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEE----TTTTEEEEEECCSGGGCEEEEEETTTC
T ss_pred C-------CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEe----cCCCEEEEEcCccCCCCeEEEEECCCC
Confidence 4 24689999999999999999999988777777899999999 34689999999 7899999999999
Q ss_pred eEEEEcC--CCCCcCCCcceeeecCeEee----------ecCCccceecCCCcccccccCCCcccccccccccCCccccc
Q psy11539 337 TSYRLTH--PYMYPEPTQSTYILDNLKFR----------WVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDK 404 (530)
Q Consensus 337 ~swRv~h--~sf~pdP~~~~f~I~G~~f~----------~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 404 (530)
+.||+.+ ..+.+++ ..+.++|+.|. |..|++|||++|++
T Consensus 156 ~~~r~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg--------------------------- 206 (343)
T 2qe8_A 156 LAARVLQGYPGIAPED--IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN--------------------------- 206 (343)
T ss_dssp CEEEECTTCTTTSCCS--CCCEETTEECBEECTTSCEECCCCCEEEEEECTTS---------------------------
T ss_pred CEEEEecCCCcccccc--cceeECCEEEEeccCCCceeceecccceeEeccCC---------------------------
Confidence 9999984 4777765 56778888775 55788999999886
Q ss_pred cccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEe
Q psy11539 405 TIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWN 484 (530)
Q Consensus 405 ~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWn 484 (530)
++|||+++.+.++|++++..|++..+. ..+....++.+|++| +++|+++|++|+||+++...++|.|||
T Consensus 207 ------~~ly~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~g~~g---~pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 207 ------EWLYLSPMHSTSMYRIKSADLSNLQLT--DAELGSKIERYSEKP---ICDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp ------CEEEEEESSCSEEEEEEHHHHTCTTCC--HHHHHTTCEEEEECC---SCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred ------CEEEEEeCCCCeEEEEEHHHhcCCCCC--hhhhhcceEecccCC---CCceEEECCCCCEEEEccCCCeEEEEE
Confidence 899999999999999999999876652 234445667778775 799999999999999999999999999
Q ss_pred C-CCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeec
Q psy11539 485 T-KTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVN 526 (530)
Q Consensus 485 t-~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~sn 526 (530)
+ + +. +.++... +.+.||++++++.+|+|||+...+
T Consensus 276 ~~~-G~-----~~~~~~~-~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 276 SAD-RA-----YKLLVTD-EKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp TTT-TE-----EEEEEEC-GGGSCEEEEEECTTSCEEEEECCG
T ss_pred CCC-CC-----EEEEEEC-CceecCCeeEECCCCcEEEEeCcc
Confidence 9 5 53 4456653 479999999999999999976544
No 3
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.51 E-value=1.9e-12 Score=133.46 Aligned_cols=263 Identities=10% Similarity=0.003 Sum_probs=176.9
Q ss_pred cCCCceeeeEEe--CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEE---eCCCc
Q psy11539 178 PENNLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSV---DKCDR 252 (530)
Q Consensus 178 p~n~iP~GV~v~--~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~I---D~cgR 252 (530)
..+.+|.++.++ ++|+|++. +..| ++.+++...+. --.+ -+|..... -+..+.+.+|.+ |..||
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~--l~~g---~V~~~~~~~~~-~~~~-~~~~~s~~----g~~~~~~sGl~~~~~D~~gr 78 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSN--LYKG---RIEVYNPKTQS-HFNV-VIDGASSN----GDGEQQMSGLSLLTHDNSKR 78 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEE--TTTT---EEEEECTTTCC-EEEE-CCTTTCCS----SCCSEEEEEEEESSSSSCCE
T ss_pred CcccCCcCccCcCCCCEEEEEe--ccCC---EEEEEcCCCCe-EEEE-ecCCcccc----CCCcceeeEEEEeccCCCCc
Confidence 457899999997 59999997 3344 88888764221 0112 34432210 134577899999 78999
Q ss_pred EEE-EeCCCCCcccCccccCCCEEEEEECC---CCcEEEEEECCCcccc--------cCccccceEEEeecCCCCeEEEE
Q psy11539 253 LWI-MDTGVTNILSSIQQLCPPKIMVFDLK---TNTLIRKYILPTAQVF--------EGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 253 LWV-LDtG~~~~~~~~~~~c~PKLvvfDL~---Td~li~~y~~P~~v~~--------~~S~lndIvVDv~~~c~~~~AYI 320 (530)
||| +|.|..-........+...|++|||. |++++....|+. +.. .-...+|++|| .+|.|||
T Consensus 79 L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~-~~~~~~~~~g~~~~~~nDvavD-----~~GnaYV 152 (334)
T 2p9w_A 79 LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEK-VQDEFEKKAGKRPFGVVQSAQD-----RDGNSYV 152 (334)
T ss_dssp EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHH-HHHHHHHHHSSCCEEEEEEEEC-----TTSCEEE
T ss_pred EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcc-ccccccccccccccCCceeEEC-----CCCCEEE
Confidence 999 68764322112233467899999999 999999999954 222 12458999999 7899999
Q ss_pred ecCCC-CeEEEEEccCCe--EEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccccc
Q psy11539 321 NDVFR-YGLIVYDFFKNT--SYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHY 397 (530)
Q Consensus 321 tDsg~-~gLIVyDl~~g~--swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~ 397 (530)
+|+.. +.|+.+|..... .|-... |... -..|++|||+.|++
T Consensus 153 t~s~~~~~I~rV~pdG~~~~~~~~~~------~~~~----------~~~G~nGIv~~pdg-------------------- 196 (334)
T 2p9w_A 153 AFALGMPAIARVSADGKTVSTFAWES------GNGG----------QRPGYSGITFDPHS-------------------- 196 (334)
T ss_dssp EEEESSCEEEEECTTSCCEEEEEECC------CCSS----------SCCSCSEEEEETTT--------------------
T ss_pred eCCCCCCeEEEEeCCCCEEeeeeecC------CCcc----------cccCcceEEEeCCC--------------------
Confidence 99999 999999998652 232221 1100 12388999999986
Q ss_pred CCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEe--ccccCCCCCcce-EEcCCCcE-EEE
Q psy11539 398 NGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYL--GSRFKNTQASAS-AINSNGVM-FYN 473 (530)
Q Consensus 398 ~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~l--G~rG~~sqs~G~-aiD~~G~L-Yft 473 (530)
+.|+-+-- +.+|++++.. .. . . ..+..- |..+...-++|+ ..+.+|.+ +++
T Consensus 197 -------------~~Liv~~~-~g~L~~fD~~---~p-v-----~--~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~ 251 (334)
T 2p9w_A 197 -------------NKLIAFGG-PRALTAFDVS---KP-Y-----A--WPEPVKINGDFGTLSGTEKIVTVPVGNESVLVG 251 (334)
T ss_dssp -------------TEEEEESS-SSSEEEEECS---SS-S-----C--CCEECEESSCCCCCTTEEEEEEEEETTEEEEEE
T ss_pred -------------CEEEEEcC-CCeEEEEcCC---CC-c-----c--eeecccccCCcccccCcccccccccCCEEEEEE
Confidence 66666665 7789999865 11 1 0 022222 432333457885 66777777 888
Q ss_pred ccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEe------cCCcEEEEE
Q psy11539 474 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEE------EEKENTCTF 523 (530)
Q Consensus 474 ~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id------~dG~lYv~~ 523 (530)
+-..+.+...+.+ + +. +.+++..-+..+. +.|++++ .++.+|++.
T Consensus 252 ~~~~~~~~l~S~D-g-W~--sa~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~ 302 (334)
T 2p9w_A 252 ARAPYAISFRSWD-N-WK--SANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVS 302 (334)
T ss_dssp EETTEEEEEECSS-T-TS--EEEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEE
T ss_pred cCCCCEEEEECCC-C-cc--eeEEeeeecCccc-cCceeEEEEeccccCCeEEEEe
Confidence 8777777777777 6 65 5667766565666 8899887 788999864
No 4
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.49 E-value=2.2e-12 Score=135.50 Aligned_cols=253 Identities=9% Similarity=0.013 Sum_probs=165.9
Q ss_pred CceeeeEEe----CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEE
Q psy11539 181 NLPLGIGIW----RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIM 256 (530)
Q Consensus 181 ~iP~GV~v~----~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVL 256 (530)
.-|.||++. +++||++-.. ..|..|+...+ .+..+- ..+..+.++.+|..|+|||.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~------~~I~~id~~~g----~v~~~~----------~~~~~P~giavd~dG~lyVa 198 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQR------DAFRHVDFVNQ----YVDIKT----------TNIGQCADVNFTLNGDMVVV 198 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBT------SCEEEEETTTT----EEEEEC----------CCCSCEEEEEECTTCCEEEE
T ss_pred CCCceEEEccccCCCEEEEEeCC------CCEEEEECCCC----EEEEee----------cCCCCccEEEECCCCCEEEE
Confidence 359999998 3999999654 36888876422 222111 14678999999999999999
Q ss_pred eCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCC
Q psy11539 257 DTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKN 336 (530)
Q Consensus 257 DtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g 336 (530)
|.+... ..-.++.++...+.. ....+ ......++|+|| ..++.+||+|...+.|.+||..++
T Consensus 199 d~~~~~--------~~~gv~~~~~~~~~~-~~~~~-----~~~~~P~giavd----~~~G~lyv~d~~~~~V~~~d~~~g 260 (433)
T 4hw6_A 199 DDQSSD--------TNTGIYLFTRASGFT-ERLSL-----CNARGAKTCAVH----PQNGKIYYTRYHHAMISSYDPATG 260 (433)
T ss_dssp ECCSCT--------TSEEEEEECGGGTTC-CEEEE-----EECSSBCCCEEC----TTTCCEEECBTTCSEEEEECTTTC
T ss_pred cCCCCc--------ccceEEEEECCCCee-ccccc-----cccCCCCEEEEe----CCCCeEEEEECCCCEEEEEECCCC
Confidence 987421 112366666543321 11112 124567889998 237999999999999999999988
Q ss_pred eE-EEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEE
Q psy11539 337 TS-YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYF 415 (530)
Q Consensus 337 ~s-wRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf 415 (530)
+. ..+... .+. . ..+|||++|++ ++||+
T Consensus 261 ~~~~~~~~~-------------~~~--~---~~~~ia~dpdG---------------------------------~~LYv 289 (433)
T 4hw6_A 261 TLTEEEVMM-------------DTK--G---SNFHIVWHPTG---------------------------------DWAYI 289 (433)
T ss_dssp CEEEEEEEC-------------SCC--S---SCEEEEECTTS---------------------------------SEEEE
T ss_pred eEEEEEecc-------------CCC--C---CcccEEEeCCC---------------------------------CEEEE
Confidence 65 333210 000 0 12379999876 78999
Q ss_pred EeCCCCeeEEEecc----hhcCcc-ccCCccccccceEEeccccCCCCCcceEE---------cCCCcEEEEccCCCeEE
Q psy11539 416 HSMSSNRHYYVSTT----DLRNSS-RYVNSSDIDEYFHYLGSRFKNTQASASAI---------NSNGVMFYNLVTKHSVG 481 (530)
Q Consensus 416 ~plsS~~lY~V~T~----~Lrn~s-~~~~~~~~~~~v~~lG~rG~~sqs~G~ai---------D~~G~LYft~~~~~aI~ 481 (530)
.-....++++++.. .|.... +........ ...-.+.......+.|+++ |.+|+||+++..++.|.
T Consensus 290 ad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g-~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~ 368 (433)
T 4hw6_A 290 IYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPG-WVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVR 368 (433)
T ss_dssp EETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCC-CBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEE
T ss_pred EeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCc-cCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEE
Confidence 99999999998732 111110 000000000 0000111112346888999 99999999999999999
Q ss_pred EEeCCCCccccCceeEEeec---------------CCceeecceeEEe-cCCcEEEEEeeceee
Q psy11539 482 CWNTKTKVYLPQTQDIVQTS---------------RDILNFREEGEEE-EEKENTCTFLVNKYV 529 (530)
Q Consensus 482 cWnt~~~~~~~~n~~lV~~d---------------~~~L~~Pd~l~Id-~dG~lYv~~~snr~~ 529 (530)
+++++ +.+ ..++.. ..+|.+|.+|+++ .+|.|||....|++|
T Consensus 369 ~~~~~-G~v-----~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rI 426 (433)
T 4hw6_A 369 VLTPE-GRV-----TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRV 426 (433)
T ss_dssp EECTT-SEE-----EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEE
T ss_pred EECCC-CCE-----EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEE
Confidence 99987 643 233321 2258999999999 999999999999776
No 5
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.48 E-value=2.2e-11 Score=119.58 Aligned_cols=239 Identities=10% Similarity=0.047 Sum_probs=157.2
Q ss_pred CceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeCC
Q psy11539 181 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTG 259 (530)
Q Consensus 181 ~iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDtG 259 (530)
..|.|+++. +++||++-.. . .+|.+++... . .+. .|... -.+.++.+|..|+|||.|.+
T Consensus 32 ~~pegia~~~~g~lyv~d~~--~---~~I~~~d~~g-~---~~~-----~~~~~------~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHE--V---GEIVSITPDG-N---QQI-----HATVE------GKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp CCEEEEEECTTSCEEEEETT--T---TEEEEECTTC-C---EEE-----EEECS------SEEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCC--C---CeEEEECCCC-c---eEE-----EEeCC------CCceeEEEcCCCcEEEEecc
Confidence 478999996 7899999522 2 3677776532 1 111 01110 25889999999999999977
Q ss_pred CCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCe--
Q psy11539 260 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT-- 337 (530)
Q Consensus 260 ~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~-- 337 (530)
.-. -+|+.||..++++.....++. ..+.+.++++ .++.+|++|.....|.++|..+++
T Consensus 92 ~~~----------~~v~~~d~~~g~~~~~~~~~~-----~~~~~g~~~~-----~~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 92 ADS----------IPVVSLVKSDGTVETLLTLPD-----AIFLNGITPL-----SDTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp TTS----------CEEEEEECTTSCEEEEEECTT-----CSCEEEEEES-----SSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCc----------ceEEEEcCCCCeEEEEEeCCC-----ccccCccccc-----CCCcEEEEECCCCeEEEEeCCCCcEe
Confidence 421 359999999999876666643 3445666654 467899999988899999998763
Q ss_pred EEEEcCCCCCc-CCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEE
Q psy11539 338 SYRLTHPYMYP-EPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFH 416 (530)
Q Consensus 338 swRv~h~sf~p-dP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~ 416 (530)
.|+.. ....+ .+. . .+. +.+|| +++ +++||+.
T Consensus 152 v~~~~-~~~~~~~~~------~--~~~---~pngi--s~d---------------------------------g~~lyv~ 184 (306)
T 2p4o_A 152 IWLEH-PMLARSNSE------S--VFP---AANGL--KRF---------------------------------GNFLYVS 184 (306)
T ss_dssp EEEEC-GGGSCSSTT------C--CSC---SEEEE--EEE---------------------------------TTEEEEE
T ss_pred EEEEC-Ccccccccc------C--CCC---cCCCc--CcC---------------------------------CCEEEEE
Confidence 33322 11100 000 0 011 22344 444 3899999
Q ss_pred eCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccccCcee
Q psy11539 417 SMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQD 496 (530)
Q Consensus 417 plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~ 496 (530)
-....++++++.+- +..+ ...+.+.+. ..++|+++|.+|+||+++...+.|.+++++ +.+ .
T Consensus 185 d~~~~~I~~~~~~~--~g~~--------~~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~-----~ 245 (306)
T 2p4o_A 185 NTEKMLLLRIPVDS--TDKP--------GEPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST-----T 245 (306)
T ss_dssp ETTTTEEEEEEBCT--TSCB--------CCCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE-----E
T ss_pred eCCCCEEEEEEeCC--CCCC--------CccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE-----E
Confidence 99999999998642 1111 011222221 368999999999999999999999999998 643 1
Q ss_pred EEeecCCceeecceeEEe---cC-CcEEEEEee
Q psy11539 497 IVQTSRDILNFREEGEEE---EE-KENTCTFLV 525 (530)
Q Consensus 497 lV~~d~~~L~~Pd~l~Id---~d-G~lYv~~~s 525 (530)
.+..-...+.+|.+++++ .+ +.|||+...
T Consensus 246 ~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 246 IIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 222212247889999997 45 689997653
No 6
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.44 E-value=2.5e-11 Score=115.54 Aligned_cols=237 Identities=9% Similarity=0.123 Sum_probs=156.6
Q ss_pred CceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEE-eCCCcEEEEeC
Q psy11539 181 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSV-DKCDRLWIMDT 258 (530)
Q Consensus 181 ~iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~I-D~cgRLWVLDt 258 (530)
..|.+|++. ++++||+--. . .+|..++.. .. .+..++... .....+..+.++.+ |..|+|||.|.
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~--~---~~i~~~d~~-g~---~~~~~~~~~----~~~~~~~~p~~i~~~~~~g~l~v~~~ 96 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTN--N---HRIQIFDKE-GR---FKFQFGECG----KRDSQLLYPNRVAVVRNSGDIIVTER 96 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGG--G---TEEEEECTT-SC---EEEEECCBS----SSTTCBSSEEEEEEETTTTEEEEEEC
T ss_pred CCCceEEECCCCCEEEEECC--C---CEEEEECCC-Cc---EEEEecccC----CCcccccCceEEEEEcCCCeEEEEcC
Confidence 469999997 7899998422 1 257667643 11 233333211 01234667899999 58999999996
Q ss_pred CCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeE
Q psy11539 259 GVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 259 G~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~s 338 (530)
+. ..+|.+|| .++++++++..+ ......+|++| .++.+||+|.....|.+||......
T Consensus 97 ~~-----------~~~i~~~d-~~g~~~~~~~~~-----~~~~~~~i~~~-----~~g~l~v~~~~~~~i~~~~~~g~~~ 154 (286)
T 1q7f_A 97 SP-----------THQIQIYN-QYGQFVRKFGAT-----ILQHPRGVTVD-----NKGRIIVVECKVMRVIIFDQNGNVL 154 (286)
T ss_dssp GG-----------GCEEEEEC-TTSCEEEEECTT-----TCSCEEEEEEC-----TTSCEEEEETTTTEEEEECTTSCEE
T ss_pred CC-----------CCEEEEEC-CCCcEEEEecCc-----cCCCceEEEEe-----CCCCEEEEECCCCEEEEEcCCCCEE
Confidence 51 13599999 578888776542 22456788998 4567999999999999999765444
Q ss_pred EEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeC
Q psy11539 339 YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSM 418 (530)
Q Consensus 339 wRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pl 418 (530)
+.+... .. + ..+.+|++++++ .||+...
T Consensus 155 ~~~~~~--------~~-------~---~~p~~i~~~~~g----------------------------------~l~v~~~ 182 (286)
T 1q7f_A 155 HKFGCS--------KH-------L---EFPNGVVVNDKQ----------------------------------EIFISDN 182 (286)
T ss_dssp EEEECT--------TT-------C---SSEEEEEECSSS----------------------------------EEEEEEG
T ss_pred EEeCCC--------Cc-------c---CCcEEEEECCCC----------------------------------CEEEEEC
Confidence 433211 00 0 134578888765 3777766
Q ss_pred CCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCC-eEEEEeCCCCccccCceeE
Q psy11539 419 SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKH-SVGCWNTKTKVYLPQTQDI 497 (530)
Q Consensus 419 sS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~-aI~cWnt~~~~~~~~n~~l 497 (530)
....++.++.. . ..+..++..|....+.++++|.+|+||+++...+ .|.+|+++ +.+ ...
T Consensus 183 ~~~~i~~~~~~----g----------~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~----~~~ 243 (286)
T 1q7f_A 183 RAHCVKVFNYE----G----------QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQL----ISA 243 (286)
T ss_dssp GGTEEEEEETT----C----------CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCE----EEE
T ss_pred CCCEEEEEcCC----C----------CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCE----EEE
Confidence 66667776521 1 1223344333234688999999999999998886 99999988 643 223
Q ss_pred EeecCCceeecceeEEecCCcEEEEEe
Q psy11539 498 VQTSRDILNFREEGEEEEEKENTCTFL 524 (530)
Q Consensus 498 V~~d~~~L~~Pd~l~Id~dG~lYv~~~ 524 (530)
+.. ......|.+++++.+|+|||...
T Consensus 244 ~~~-~~~~~~~~~i~~~~~g~l~vs~~ 269 (286)
T 1q7f_A 244 LES-KVKHAQCFDVALMDDGSVVLASK 269 (286)
T ss_dssp EEE-SSCCSCEEEEEEETTTEEEEEET
T ss_pred Ecc-cCCCCcceeEEECCCCcEEEECC
Confidence 332 23345688999999999999854
No 7
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.43 E-value=1.1e-11 Score=122.46 Aligned_cols=265 Identities=11% Similarity=0.068 Sum_probs=159.8
Q ss_pred CceeeeEEe-CCeEEEEccCC---CC--------------C--CCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCce
Q psy11539 181 NLPLGIGIW-RSTIFLSFPKW---KA--------------G--IPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLI 240 (530)
Q Consensus 181 ~iP~GV~v~-~gRlFVTiPR~---~~--------------G--vP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~Lv 240 (530)
..|.||++. +|++||+--.- .. + ...+|..++...+. .+..+. ...|.
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~---~~~~~~---------~~~~~ 91 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE---ILQSSG---------KNLFY 91 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC---EEEEEC---------TTTCS
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe---EEeccC---------CCccC
Confidence 358999997 79999985321 10 0 00145555542211 121111 13467
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCc-EEEEEECCCcc---cccCccccceEEEeecCCCCe
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNT-LIRKYILPTAQ---VFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~-li~~y~~P~~v---~~~~S~lndIvVDv~~~c~~~ 316 (530)
.+.++.+|..|+|||.|.+. -+|.+||+.... .+.++.-+... ........+|++| .+++
T Consensus 92 ~p~gia~d~~g~l~v~d~~~------------~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~----~~~g 155 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVAL------------HQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVE----PSTG 155 (329)
T ss_dssp SEEEEEECTTSCEEEEETTT------------TEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEEC----TTTC
T ss_pred CceEEEECCCCCEEEEECCC------------CEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEe----CCCC
Confidence 89999999999999999985 359999985542 45444321110 0112346789998 2379
Q ss_pred EEEEecC-CCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccc
Q psy11539 317 FAYVNDV-FRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVH 395 (530)
Q Consensus 317 ~AYItDs-g~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~ 395 (530)
.+||+|+ +...|.+||......+.+........+.. ..|. ...|||+++++
T Consensus 156 ~lyv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~-------~~~~---~p~gia~d~~~------------------ 207 (329)
T 3fvz_A 156 AVFVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRP-------GQFS---VPHSLALVPHL------------------ 207 (329)
T ss_dssp CEEEEECSSCCEEEEECTTSCEEEEECEECCSSSCCT-------TEES---CEEEEEEETTT------------------
T ss_pred eEEEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCC-------cccC---CCcEEEEECCC------------------
Confidence 9999997 78999999955433333321110000000 1122 24588888764
Q ss_pred ccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccC--CccccccceEEeccccCCCCCcceEEcCCCcEEEE
Q psy11539 396 HYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYV--NSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYN 473 (530)
Q Consensus 396 ~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~--~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft 473 (530)
..||.+-....++..++.+ ...+.. ........+..+. -.+ |++++.+|.+|++
T Consensus 208 ---------------g~l~v~d~~~~~I~~~~~~---~G~~~~~~~~~~~~~~~~~~~-----~~p-g~~~~~~g~~~v~ 263 (329)
T 3fvz_A 208 ---------------DQLCVADRENGRIQCFKTD---TKEFVREIKHASFGRNVFAIS-----YIP-GFLFAVNGKPYFG 263 (329)
T ss_dssp ---------------TEEEEEETTTTEEEEEETT---TCCEEEEECCTTTTTCEEEEE-----EET-TEEEEEECCCCTT
T ss_pred ---------------CEEEEEECCCCEEEEEECC---CCcEEEEEeccccCCCcceee-----ecC-CEEEEeCCCEEec
Confidence 5788888888888777643 011000 0000000000000 012 8888889999999
Q ss_pred ccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 474 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 474 ~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
+.....|..|+..++.+ ...+......+.+|.+|+++.+|+|||....|..|
T Consensus 264 ~~~~~~v~~~~~~~g~~----~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I 315 (329)
T 3fvz_A 264 DQEPVQGFVMNFSSGEI----IDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTV 315 (329)
T ss_dssp CSCCCCEEEEETTTCCE----EEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCE
T ss_pred cCCCcEEEEEEcCCCeE----EEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEE
Confidence 99999999999763433 22333234578999999999999999998877655
No 8
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.41 E-value=1.8e-11 Score=114.72 Aligned_cols=231 Identities=13% Similarity=0.063 Sum_probs=150.2
Q ss_pred ceeeeEEe-CCeEEE-EccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeCC
Q psy11539 182 LPLGIGIW-RSTIFL-SFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTG 259 (530)
Q Consensus 182 iP~GV~v~-~gRlFV-TiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDtG 259 (530)
.|.++++. +|++|+ +-.. -..|..++... . ....++. ..+..+.++.+|+.|+|||.|.+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~-----~~~i~~~~~~~-~---~~~~~~~---------~~~~~p~~i~~~~~g~l~v~~~~ 86 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGM-----YGRVVKLATGS-T---GTTVLPF---------NGLYQPQGLAVDGAGTVYVTDFN 86 (270)
T ss_dssp CEEEEEECTTCCEEEEECSS-----SCEEEEECC---------EECCC---------CSCCSCCCEEECTTCCEEEEETT
T ss_pred CccceEECCCCCEEEEccCC-----CCcEEEecCCC-c---ccceEee---------CCcCCcceeEECCCCCEEEEcCC
Confidence 78999996 789999 6321 13677776432 1 1112221 23456788999999999999972
Q ss_pred CCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEE
Q psy11539 260 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSY 339 (530)
Q Consensus 260 ~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~sw 339 (530)
-+|.+||+.+..+. .+... .......|++| .++.+|++|.+...|.+||..+....
T Consensus 87 -------------~~i~~~d~~~~~~~-~~~~~-----~~~~p~~i~~~-----~~g~l~v~~~~~~~i~~~~~~~~~~~ 142 (270)
T 1rwi_B 87 -------------NRVVTLAAGSNNQT-VLPFD-----GLNYPEGLAVD-----TQGAVYVADRGNNRVVKLAAGSKTQT 142 (270)
T ss_dssp -------------TEEEEECTTCSCCE-ECCCC-----SCSSEEEEEEC-----TTCCEEEEEGGGTEEEEECTTCCSCE
T ss_pred -------------CEEEEEeCCCceEe-eeecC-----CcCCCcceEEC-----CCCCEEEEECCCCEEEEEECCCceeE
Confidence 24999999765543 22221 12456788888 46679999998889999976654332
Q ss_pred EEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeCC
Q psy11539 340 RLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMS 419 (530)
Q Consensus 340 Rv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pls 419 (530)
.... .+ ...+.+|++++++ .||+....
T Consensus 143 ~~~~--------------~~-----~~~p~~i~~~~~g----------------------------------~l~v~~~~ 169 (270)
T 1rwi_B 143 VLPF--------------TG-----LNDPDGVAVDNSG----------------------------------NVYVTDTD 169 (270)
T ss_dssp ECCC--------------CS-----CCSCCCEEECTTC----------------------------------CEEEEEGG
T ss_pred eecc--------------cc-----CCCceeEEEeCCC----------------------------------CEEEEECC
Confidence 2110 00 0134578887764 38888777
Q ss_pred CCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccccCceeEEe
Q psy11539 420 SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQ 499 (530)
Q Consensus 420 S~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~lV~ 499 (530)
+..+++++..--. .......+ ...+.++++|.+|.||+++...+.|.+|+++ +... ...
T Consensus 170 ~~~i~~~~~~~~~--------------~~~~~~~~-~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-----~~~ 228 (270)
T 1rwi_B 170 NNRVVKLEAESNN--------------QVVLPFTD-ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG-STTS-----TVL 228 (270)
T ss_dssp GTEEEEECTTTCC--------------EEECCCSS-CCSEEEEEECTTCCEEEEETTTSCEEEECTT-CSCC-----EEC
T ss_pred CCEEEEEecCCCc--------------eEeecccC-CCCceEEEECCCCCEEEEECCCCcEEEEcCC-CCcc-----eee
Confidence 7778877642110 00010011 1357899999999999999999999999998 5321 111
Q ss_pred ecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 500 TSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 500 ~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
....+..|.+++++.+|.|||....|..|
T Consensus 229 -~~~~~~~p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 229 -PFTGLNTPLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp -CCCSCSCEEEEEECTTCCEEEEEGGGTEE
T ss_pred -ccCCCCCceeEEECCCCCEEEEECCCCEE
Confidence 12346789999999999999988776654
No 9
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.39 E-value=5e-11 Score=113.47 Aligned_cols=200 Identities=11% Similarity=0.074 Sum_probs=136.7
Q ss_pred CCceEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 237 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 237 ~~LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
..|..+.++.+|..|+|||.|.+. -+|.+||+. ++.++.+...............|+++ ..++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~------------~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~----~~~g 89 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNN------------HRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVV----RNSG 89 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGG------------TEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEE----TTTT
T ss_pred CccCCCceEEECCCCCEEEEECCC------------CEEEEECCC-CcEEEEecccCCCcccccCceEEEEE----cCCC
Confidence 468899999999999999999863 359999986 77777664322111112345788885 2578
Q ss_pred EEEEecCC-CCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccc
Q psy11539 317 FAYVNDVF-RYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVH 395 (530)
Q Consensus 317 ~AYItDsg-~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~ 395 (530)
.+||+|.. ...|.+||......+++.... ...+.+|++++++
T Consensus 90 ~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~-------------------~~~~~~i~~~~~g------------------ 132 (286)
T 1q7f_A 90 DIIVTERSPTHQIQIYNQYGQFVRKFGATI-------------------LQHPRGVTVDNKG------------------ 132 (286)
T ss_dssp EEEEEECGGGCEEEEECTTSCEEEEECTTT-------------------CSCEEEEEECTTS------------------
T ss_pred eEEEEcCCCCCEEEEECCCCcEEEEecCcc-------------------CCCceEEEEeCCC------------------
Confidence 99999975 789999995433333332110 0123478887764
Q ss_pred ccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEcc
Q psy11539 396 HYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLV 475 (530)
Q Consensus 396 ~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~ 475 (530)
.||+......+++.++.. . ..+..++..+....+.++++|.+|.||+++.
T Consensus 133 ----------------~l~v~~~~~~~i~~~~~~----g----------~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 133 ----------------RIIVVECKVMRVIIFDQN----G----------NVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp ----------------CEEEEETTTTEEEEECTT----S----------CEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred ----------------CEEEEECCCCEEEEEcCC----C----------CEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 488887777778777531 1 1122333222224688999999999999999
Q ss_pred CCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeec
Q psy11539 476 TKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVN 526 (530)
Q Consensus 476 ~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~sn 526 (530)
..+.|.+||.+ +.+ ...+.. ...+.+|.+++++.+|++||....+
T Consensus 183 ~~~~i~~~~~~-g~~----~~~~~~-~g~~~~p~~i~~d~~G~l~v~~~~~ 227 (286)
T 1q7f_A 183 RAHCVKVFNYE-GQY----LRQIGG-EGITNYPIGVGINSNGEILIADNHN 227 (286)
T ss_dssp GGTEEEEEETT-CCE----EEEESC-TTTSCSEEEEEECTTCCEEEEECSS
T ss_pred CCCEEEEEcCC-CCE----EEEEcc-CCccCCCcEEEECCCCCEEEEeCCC
Confidence 99999999998 543 222322 3347899999999999999988766
No 10
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.39 E-value=8.3e-12 Score=122.82 Aligned_cols=245 Identities=11% Similarity=0.065 Sum_probs=155.6
Q ss_pred CceeeeEEe-CCe-EEEEccCCCCCCCcEEEEEECCCCCCCCccCCC--CCCCcCCCCCCC---------CceEEEEEEE
Q psy11539 181 NLPLGIGIW-RST-IFLSFPKWKAGIPFTLASFNMNDPSESPILLPY--PNWSYFDDSNCN---------SLISVFRMSV 247 (530)
Q Consensus 181 ~iP~GV~v~-~gR-lFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PY--Psw~wn~~~nc~---------~LvSV~rv~I 247 (530)
..|.|+++. +++ +|+.... ..|.+++... + .++.| +...++. ..|. .+..+.++.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~------~~i~~~~~~~-~---~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~p~gi~~ 87 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQD------GRVIKYEGPN-S---GFVDFAYASPYWNK-AFCENSTDAEKRPLCGRTYDISY 87 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTT------SEEEEECCTT-T---CEEEEEESCTTCCH-HHHTTCCCGGGHHHHCCEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCC------CeEEEECCCC-C---ceEEEecccccccc-cccccccchhccccCCCCceEEE
Confidence 468899986 677 8887532 2566665432 1 12222 1110000 0111 2346899999
Q ss_pred eC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCC-CeEEEEecCCC
Q psy11539 248 DK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCD-HVFAYVNDVFR 325 (530)
Q Consensus 248 D~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~-~~~AYItDsg~ 325 (530)
|. .|+|||.|.+. .|+.||+.++++ +.+.-... -....++++|++| . ++.+||+|...
T Consensus 88 ~~~~g~l~v~d~~~-------------~i~~~d~~~g~~-~~~~~~~~-~~~~~~p~~i~~d-----~~~G~l~v~d~~~ 147 (322)
T 2fp8_A 88 NLQNNQLYIVDCYY-------------HLSVVGSEGGHA-TQLATSVD-GVPFKWLYAVTVD-----QRTGIVYFTDVST 147 (322)
T ss_dssp ETTTTEEEEEETTT-------------EEEEECTTCEEC-EEEESEET-TEECSCEEEEEEC-----TTTCCEEEEESCS
T ss_pred cCCCCcEEEEECCC-------------CEEEEeCCCCEE-EEecccCC-CCcccccceEEEe-----cCCCEEEEECCcc
Confidence 96 89999999873 288999877653 22221000 0123567899998 5 78999999762
Q ss_pred -----------------CeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcc
Q psy11539 326 -----------------YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYE 388 (530)
Q Consensus 326 -----------------~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~ 388 (530)
.+|++||..+++...+.. .+ ...+|||+++++
T Consensus 148 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----------------~~---~~p~gia~~~dg----------- 196 (322)
T 2fp8_A 148 LYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-----------------EL---HVPGGAEVSADS----------- 196 (322)
T ss_dssp SCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-----------------EE---SCCCEEEECTTS-----------
T ss_pred cccccccceehcccCCCceEEEEeCCCCEEEEecc-----------------CC---ccCcceEECCCC-----------
Confidence 568888887775432211 01 134689998876
Q ss_pred cccccccccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCC
Q psy11539 389 YYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNG 468 (530)
Q Consensus 389 ~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G 468 (530)
+.||+......++++++.+- ... ...+.+.+. .+ ++|+++|.+|
T Consensus 197 ----------------------~~lyv~d~~~~~I~~~~~~~---~~~--------~~~~~~~~~--~g-P~gi~~d~~G 240 (322)
T 2fp8_A 197 ----------------------SFVLVAEFLSHQIVKYWLEG---PKK--------GTAEVLVKI--PN-PGNIKRNADG 240 (322)
T ss_dssp ----------------------SEEEEEEGGGTEEEEEESSS---TTT--------TCEEEEEEC--SS-EEEEEECTTS
T ss_pred ----------------------CEEEEEeCCCCeEEEEECCC---CcC--------CccceEEeC--CC-CCCeEECCCC
Confidence 78999988888898887531 111 112222221 13 8999999999
Q ss_pred cEEEEccC----------CCeEEEEeCCCCccccCceeEEeecCC-ceeecceeEEecCCcEEEEEeeceee
Q psy11539 469 VMFYNLVT----------KHSVGCWNTKTKVYLPQTQDIVQTSRD-ILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 469 ~LYft~~~----------~~aI~cWnt~~~~~~~~n~~lV~~d~~-~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
+||++... .+.|.++|++ +.. ...+...+. .+.+|+++..+ +|+|||....+..|
T Consensus 241 ~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~----~~~~~~~~g~~~~~~~~~~~~-~g~L~v~~~~~~~i 306 (322)
T 2fp8_A 241 HFWVSSSEELDGNMHGRVDPKGIKFDEF-GNI----LEVIPLPPPFAGEHFEQIQEH-DGLLYIGTLFHGSV 306 (322)
T ss_dssp CEEEEEEEETTSSTTSCEEEEEEEECTT-SCE----EEEEECCTTTTTSCCCEEEEE-TTEEEEECSSCSEE
T ss_pred CEEEEecCcccccccCCCccEEEEECCC-CCE----EEEEECCCCCccccceEEEEe-CCEEEEeecCCCce
Confidence 99999876 5789999998 643 223332222 27889999874 79999987777655
No 11
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.38 E-value=1.8e-10 Score=108.47 Aligned_cols=230 Identities=13% Similarity=0.109 Sum_probs=156.3
Q ss_pred CCceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeC
Q psy11539 180 NNLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDT 258 (530)
Q Consensus 180 n~iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDt 258 (530)
...|.+|.+. +|++|++... . ..|..++.. + .+..++. ...+..+.++.+|..|+|||.|.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~--~---~~v~~~~~~--~---~~~~~~~--------~~~~~~~~~i~~~~~g~l~v~~~ 80 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHK--A---NKISSLDQS--G---RIKEFEV--------PTPDAKVMCLIVSSLGDIWFTEN 80 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETT--T---TEEEEECTT--S---CEEEEEC--------SSTTCCEEEEEECTTSCEEEEET
T ss_pred CCCcceeeECCCCCEEEEcCC--C---CeEEEECCC--C---ceEEEEC--------CCCCCcceeEEECCCCCEEEEec
Confidence 3578899997 7999998632 1 367777653 1 2222221 02356788999999999999997
Q ss_pred CCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeE
Q psy11539 259 GVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 259 G~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~s 338 (530)
+. -+|..||.. +++ .++.++.. ......|++| .++.+||++....+|.+||.. ++.
T Consensus 81 ~~------------~~v~~~d~~-g~~-~~~~~~~~----~~~~~~i~~~-----~~g~l~v~~~~~~~i~~~~~~-g~~ 136 (300)
T 2qc5_A 81 GA------------NKIGKLSKK-GGF-TEYPLPQP----DSGPYGITEG-----LNGDIWFTQLNGDRIGKLTAD-GTI 136 (300)
T ss_dssp TT------------TEEEEECTT-SCE-EEEECSST----TCCEEEEEEC-----STTCEEEEETTTTEEEEECTT-SCE
T ss_pred CC------------CeEEEECCC-CCe-EEecCCCC----CCCCccceEC-----CCCCEEEEccCCCeEEEECCC-CCE
Confidence 64 349999997 766 56666532 3556788888 467899999988899999988 655
Q ss_pred EEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeC
Q psy11539 339 YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSM 418 (530)
Q Consensus 339 wRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pl 418 (530)
.++..+ ... ..+.+|++++++ + ||+...
T Consensus 137 ~~~~~~----~~~--------------~~~~~i~~d~~g---------------------------------~-l~v~~~ 164 (300)
T 2qc5_A 137 YEYDLP----NKG--------------SYPAFITLGSDN---------------------------------A-LWFTEN 164 (300)
T ss_dssp EEEECS----STT--------------CCEEEEEECTTS---------------------------------S-EEEEET
T ss_pred EEccCC----CCC--------------CCceeEEECCCC---------------------------------C-EEEEec
Confidence 443211 000 133567777654 3 888887
Q ss_pred CCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccccCceeEE
Q psy11539 419 SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIV 498 (530)
Q Consensus 419 sS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~lV 498 (530)
.+..+++++. +... . .+. + . +....+.++++|.+|+||+++...+.|.+|++. +.+. .+
T Consensus 165 ~~~~i~~~~~----~g~~-------~-~~~-~-~-~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~-----~~ 223 (300)
T 2qc5_A 165 QNNSIGRITN----TGKL-------E-EYP-L-P-TNAAAPVGITSGNDGALWFVEIMGNKIGRITTT-GEIS-----EY 223 (300)
T ss_dssp TTTEEEEECT----TCCE-------E-EEE-C-S-STTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCEE-----EE
T ss_pred CCCeEEEECC----CCcE-------E-Eee-C-C-CCCCCcceEEECCCCCEEEEccCCCEEEEEcCC-CcEE-----EE
Confidence 7778888863 1111 0 111 1 1 112457899999999999999988999999986 5432 22
Q ss_pred eecCCceeecceeEEecCCcEEEEEee
Q psy11539 499 QTSRDILNFREEGEEEEEKENTCTFLV 525 (530)
Q Consensus 499 ~~d~~~L~~Pd~l~Id~dG~lYv~~~s 525 (530)
.. ...+..|.++.++.+|+|||....
T Consensus 224 ~~-~~~~~~~~~i~~d~~g~l~v~~~~ 249 (300)
T 2qc5_A 224 DI-PTPNARPHAITAGKNSEIWFTEWG 249 (300)
T ss_dssp EC-SSTTCCEEEEEECSTTCEEEEETT
T ss_pred EC-CCCCCCceEEEECCCCCEEEeccC
Confidence 21 234678999999999999997654
No 12
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.36 E-value=3.2e-11 Score=126.30 Aligned_cols=252 Identities=10% Similarity=0.032 Sum_probs=162.5
Q ss_pred CceeeeEEe---CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCc-EEEE
Q psy11539 181 NLPLGIGIW---RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIM 256 (530)
Q Consensus 181 ~iP~GV~v~---~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgR-LWVL 256 (530)
.-|.+++++ +++||++-.. ..|..|+... + .+..+- ..+..+.+|.+|..|+ |||.
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~------~~I~~id~~~-~---~v~~~~----------~~~~~P~~ia~d~~G~~lyva 196 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQ------HPTRLIDFEK-E---YVSTVY----------SGLSKVRTICWTHEADSMIIT 196 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBT------EEEEEEETTT-T---EEEEEE----------CCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCEEEECCCCCCeEEEEeCC------CcEEEEECCC-C---EEEEEe----------cCCCCcceEEEeCCCCEEEEE
Confidence 469999997 4899999643 4787887642 1 122110 1356799999999987 9999
Q ss_pred eCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCC
Q psy11539 257 DTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKN 336 (530)
Q Consensus 257 DtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g 336 (530)
|.+... ....++.++.. +++...-.++ ......++++| .+++++|++|.+...|.+||..++
T Consensus 197 d~~~~~--------~~~~v~~~~~~-g~~~~~~~l~-----~~~~p~giavd----p~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 197 NDQNNN--------DRPNNYILTRE-SGFKVITELT-----KGQNCNGAETH----PINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp ECCSCT--------TSEEEEEEEGG-GTSCSEEEEE-----ECSSCCCEEEC----TTTCCEEEEETTTTEEEEEETTTT
T ss_pred eCCCCc--------ccceEEEEeCC-Cceeeeeeec-----cCCCceEEEEe----CCCCEEEEEECCCCEEEEEECCCC
Confidence 986421 12346777764 3332111121 23456889998 237899999999999999999977
Q ss_pred eEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEE
Q psy11539 337 TSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFH 416 (530)
Q Consensus 337 ~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~ 416 (530)
....+.. +.+. .+..|||++|++ ++||+.
T Consensus 259 ~~~~~~~-------------~~~~-----~~P~gia~~pdG---------------------------------~~lyv~ 287 (430)
T 3tc9_A 259 ETTPLFT-------------IQDS-----GWEFHIQFHPSG---------------------------------NYAYIV 287 (430)
T ss_dssp EEEEEEE-------------CSSS-----SCCEEEEECTTS---------------------------------SEEEEE
T ss_pred cEEEEEE-------------cCCC-----CcceeEEEcCCC---------------------------------CEEEEE
Confidence 5432210 1100 124589999886 789999
Q ss_pred eCCCCeeEEEecchhcCccccCCccccc-----cceE-EeccccCCCCCc-ceEE--------cCCCcEEEEccCCCeEE
Q psy11539 417 SMSSNRHYYVSTTDLRNSSRYVNSSDID-----EYFH-YLGSRFKNTQAS-ASAI--------NSNGVMFYNLVTKHSVG 481 (530)
Q Consensus 417 plsS~~lY~V~T~~Lrn~s~~~~~~~~~-----~~v~-~lG~rG~~sqs~-G~ai--------D~~G~LYft~~~~~aI~ 481 (530)
-..+.++++++..-.. ..+.. ...+. ..+. -.+.......+. |+++ |.+|+||+++..+++|.
T Consensus 288 d~~~~~I~~~~~d~~~-~~~~~-~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~ 365 (430)
T 3tc9_A 288 VVNQHYILRSDYDWKT-KRLTT-PYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIR 365 (430)
T ss_dssp ETTTTEEEEEEEETTT-TEECC-CEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEE
T ss_pred ECCCCEEEEEeCCccc-ccccc-eEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEE
Confidence 9999999998754210 00100 00000 0000 011111123455 8888 56799999999999999
Q ss_pred EEeCCCCccccCceeEEeec---------------CCceeecceeEEec-CCcEEEEEeeceee
Q psy11539 482 CWNTKTKVYLPQTQDIVQTS---------------RDILNFREEGEEEE-EKENTCTFLVNKYV 529 (530)
Q Consensus 482 cWnt~~~~~~~~n~~lV~~d---------------~~~L~~Pd~l~Id~-dG~lYv~~~snr~~ 529 (530)
+++++ +.+ ..++.. ..+|.+|.+|+++. +|+|||...-|++|
T Consensus 366 ~i~~~-G~v-----~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rI 423 (430)
T 3tc9_A 366 ILTPQ-GRV-----TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRI 423 (430)
T ss_dssp EECTT-SEE-----EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEE
T ss_pred EECCC-CcE-----EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeE
Confidence 99988 643 233321 12488999999998 69999999988776
No 13
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.34 E-value=1.7e-10 Score=119.49 Aligned_cols=203 Identities=9% Similarity=-0.040 Sum_probs=137.5
Q ss_pred CceEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeE
Q psy11539 238 SLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 317 (530)
Q Consensus 238 ~LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~ 317 (530)
.|.++.++.+|+.|+|||+|.+. .+|.+||++++++...... ..... ++++ .++..
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~------------~~I~~id~~~g~~~~~~~~-------~~~~~-ia~~----~~g~~ 184 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDD------------PRVRLISVDDNKVTTVHPG-------FKGGK-PAVT----KDKQR 184 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTT------------TEEEEEETTTTEEEEEEET-------CCBCB-CEEC----TTSSE
T ss_pred ccCCceEEEEeCCCCEEEEecCC------------CcEEEEECCCCEEEEeecc-------CCCCc-eeEe----cCCCc
Confidence 58999999999999999999964 4599999988887654433 11223 7787 35679
Q ss_pred EEEecCCCC-eEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccc
Q psy11539 318 AYVNDVFRY-GLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHH 396 (530)
Q Consensus 318 AYItDsg~~-gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~ 396 (530)
+|++|.... .|+++|..++...+.... +.+. ...+..+||++|+.
T Consensus 185 l~~~d~~~~~~I~~~d~~~~~~~~~~g~-~~~~--------------~~~~p~~iav~p~~------------------- 230 (409)
T 3hrp_A 185 VYSIGWEGTHTVYVYMKASGWAPTRIGQ-LGST--------------FSGKIGAVALDETE------------------- 230 (409)
T ss_dssp EEEEBSSTTCEEEEEEGGGTTCEEEEEE-CCTT--------------SCSCCCBCEECTTS-------------------
T ss_pred EEEEecCCCceEEEEEcCCCceeEEeee-ccch--------------hcCCcEEEEEeCCC-------------------
Confidence 999998665 899999987755433310 0000 01244678888853
Q ss_pred cCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCc-ceEEcC-CCcEEEEc
Q psy11539 397 YNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQAS-ASAINS-NGVMFYNL 474 (530)
Q Consensus 397 ~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~-G~aiD~-~G~LYft~ 474 (530)
+.||+.. ...++++++..--. . .........|..+ ..+. ++++|. +|.||+++
T Consensus 231 --------------g~lyv~d-~~~~I~~~d~~~~~---~-----~~~~~~~~~g~~~--~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 231 --------------EWLYFVD-SNKNFGRFNVKTQE---V-----TLIKQLELSGSLG--TNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp --------------SEEEEEC-TTCEEEEEETTTCC---E-----EEEEECCCCSCCC--CSSCCEEEEETTTTEEEEEE
T ss_pred --------------CeEEEEE-CCCcEEEEECCCCC---E-----EEEecccccCCCC--CCccccEEEeCCCCEEEEEe
Confidence 6899954 45678888743110 0 0000001122222 1234 999996 79999999
Q ss_pred cCCCeEEEEeCCCCccccCceeEEeecC------------CceeecceeEEecCCcEEEEEe-eceee
Q psy11539 475 VTKHSVGCWNTKTKVYLPQTQDIVQTSR------------DILNFREEGEEEEEKENTCTFL-VNKYV 529 (530)
Q Consensus 475 ~~~~aI~cWnt~~~~~~~~n~~lV~~d~------------~~L~~Pd~l~Id~dG~lYv~~~-snr~~ 529 (530)
...+.|.+|+.+ +. ..+++... .+|.+|.+++++.+|+|||... .|+.|
T Consensus 286 ~~~~~I~~~~~~-g~-----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I 347 (409)
T 3hrp_A 286 QNLSSVYKITPD-GE-----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCL 347 (409)
T ss_dssp TTTTEEEEECTT-CC-----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEE
T ss_pred CCCCEEEEEecC-CC-----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEE
Confidence 999999999988 53 22333211 3488999999999999999988 77655
No 14
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.33 E-value=7e-10 Score=110.18 Aligned_cols=229 Identities=8% Similarity=0.018 Sum_probs=153.3
Q ss_pred CceeeeEEeCCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeCCC
Q psy11539 181 NLPLGIGIWRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGV 260 (530)
Q Consensus 181 ~iP~GV~v~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDtG~ 260 (530)
..|.++.++++++|++.-. .| +|..++..+.. .+.-+| .+..+..+.++..|+|||.|...
T Consensus 44 ~~~~~i~~~~~~lyv~~~~--~~---~v~viD~~t~~---~~~~i~-----------~~~~p~~i~~~~~g~lyv~~~~~ 104 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNN--SH---VIFAIDINTFK---EVGRIT-----------GFTSPRYIHFLSDEKAYVTQIWD 104 (328)
T ss_dssp SCEEEEEEETTEEEEEEGG--GT---EEEEEETTTCC---EEEEEE-----------CCSSEEEEEEEETTEEEEEEBSC
T ss_pred ccceEEEEECCEEEEEEcC--CC---EEEEEECcccE---EEEEcC-----------CCCCCcEEEEeCCCeEEEEECCC
Confidence 4678899999999999753 33 78888875322 222232 13457788887778999999642
Q ss_pred CCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC-CCeEEEEEccCCeEE
Q psy11539 261 TNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIVYDFFKNTSY 339 (530)
Q Consensus 261 ~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg-~~gLIVyDl~~g~sw 339 (530)
-+|.+||++|+++++++..+... ........|+++ ++.+|++|.+ ...|.|+|.++++..
T Consensus 105 ------------~~v~~iD~~t~~~~~~i~~g~~~-~~~~~p~~i~~~------~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 105 ------------YRIFIINPKTYEITGYIECPDMD-MESGSTEQMVQY------GKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp ------------SEEEEEETTTTEEEEEEECTTCC-TTTCBCCCEEEE------TTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred ------------CeEEEEECCCCeEEEEEEcCCcc-ccCCCcceEEEE------CCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 35999999999999999886521 112346678886 6799999985 789999999998654
Q ss_pred EEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeCC
Q psy11539 340 RLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMS 419 (530)
Q Consensus 340 Rv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pls 419 (530)
+.. .+. .+..+|++++++ + ||+....
T Consensus 166 ~~i-------------~~g-------~~p~~i~~~~dG---------------------------------~-l~v~~~~ 191 (328)
T 3dsm_A 166 DEL-------------TIG-------IQPTSLVMDKYN---------------------------------K-MWTITDG 191 (328)
T ss_dssp EEE-------------ECS-------SCBCCCEECTTS---------------------------------E-EEEEBCC
T ss_pred EEE-------------EcC-------CCccceEEcCCC---------------------------------C-EEEEECC
Confidence 321 111 123467777764 3 7777765
Q ss_pred C----------CeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcC-CCcEEEEccCCCeEEEEeCCCC
Q psy11539 420 S----------NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINS-NGVMFYNLVTKHSVGCWNTKTK 488 (530)
Q Consensus 420 S----------~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~-~G~LYft~~~~~aI~cWnt~~~ 488 (530)
. ..+++++++-.+. ...+ .++ .| ..+.+++++. .+.||++.. .|.+||+.++
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~v----------~~~~-~~~-~g--~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~ 254 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFTV----------EKQF-KFK-LG--DWPSEVQLNGTRDTLYWINN---DIWRMPVEAD 254 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTEE----------EEEE-ECC-TT--CCCEEEEECTTSCEEEEESS---SEEEEETTCS
T ss_pred CccCCccccCCceEEEEECCCCeE----------EEEE-ecC-CC--CCceeEEEecCCCEEEEEcc---EEEEEECCCC
Confidence 4 6788887643221 1111 121 12 2588999995 567888765 8999999844
Q ss_pred ccccCceeEEeecCCceeecceeEEec-CCcEEEEE
Q psy11539 489 VYLPQTQDIVQTSRDILNFREEGEEEE-EKENTCTF 523 (530)
Q Consensus 489 ~~~~~n~~lV~~d~~~L~~Pd~l~Id~-dG~lYv~~ 523 (530)
.+.. ...+. .....|.+++++. +|+|||..
T Consensus 255 ~~~~--~~~~~---~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 255 RVPV--RPFLE---FRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp SCCS--SCSBC---CCSSCEEEEEECTTTCCEEEEE
T ss_pred ceee--eeeec---CCCCceEEEEEcCCCCeEEEEc
Confidence 4321 11111 1156899999996 89999987
No 15
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.29 E-value=3.9e-10 Score=112.42 Aligned_cols=197 Identities=13% Similarity=0.086 Sum_probs=135.1
Q ss_pred ceEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCC---cEEEEEECCCcccccCccccceEEEeecCCC
Q psy11539 239 LISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN---TLIRKYILPTAQVFEGSLFSNIVTEVVEDCD 314 (530)
Q Consensus 239 LvSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td---~li~~y~~P~~v~~~~S~lndIvVDv~~~c~ 314 (530)
+..+.++.+|. .++||+.|.+. .+|..+|+.+. +...++ ++.. ......|+|| ..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~------------~~I~~~~~~g~~~~~~~~~~-~~~~----~~~p~glavd----~~ 87 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDTV-ISRD----IQAPDGLAVD----WI 87 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTT------------TEEEEEEC--------CEEE-ECSS----CSCCCEEEEE----TT
T ss_pred CCceEEEEEEeCCCEEEEEECCC------------CcEEEEECCCCCCCcccEEE-EeCC----CCCcCEEEEe----ec
Confidence 56789999996 67999999874 46999999762 222221 2211 2345789999 24
Q ss_pred CeEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccc
Q psy11539 315 HVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNV 394 (530)
Q Consensus 315 ~~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~ 394 (530)
++.+|++|.....|.|+|+.......+... + + ....|||++|.+
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~--------------~--~---~~P~~iavdp~~----------------- 131 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE--------------N--G---SKPRAIVVDPVH----------------- 131 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEEC--------------T--T---CCEEEEEEETTT-----------------
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEEC--------------C--C---CCcceEEeCCCC-----------------
Confidence 689999999999999999885432222110 0 0 123588888765
Q ss_pred cccCCccccccccCCCceEEEEeCCC-CeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEEE
Q psy11539 395 HHYNGTNVDKTIRDDQRYMYFHSMSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMFY 472 (530)
Q Consensus 395 ~~~~~~~~~~~~~~~~r~LYf~plsS-~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LYf 472 (530)
+.|||.-... .+++++.. +.+ ..+.++.. ....+.|+++| ..|.||+
T Consensus 132 ----------------g~ly~~d~~~~~~I~~~~~----dG~----------~~~~~~~~-~~~~P~gla~d~~~~~lY~ 180 (316)
T 1ijq_A 132 ----------------GFMYWTDWGTPAKIKKGGL----NGV----------DIYSLVTE-NIQWPNGITLDLLSGRLYW 180 (316)
T ss_dssp ----------------TEEEEEECSSSCEEEEEET----TSC----------CEEEEECS-SCSCEEEEEEETTTTEEEE
T ss_pred ----------------CEEEEEccCCCCeEEEEcC----CCC----------CeEEEEEC-CCCCceEEEEeccCCEEEE
Confidence 7899998765 67888763 111 11222221 12478999999 7899999
Q ss_pred EccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 473 NLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 473 t~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
++...+.|.++|.+ +. +..++......+.+|.||+++ +|+||++...+..|
T Consensus 181 ~D~~~~~I~~~d~d-g~----~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V 231 (316)
T 1ijq_A 181 VDSKLHSISSIDVN-GG----NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI 231 (316)
T ss_dssp EETTTTEEEEEETT-SC----SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred EECCCCeEEEEecC-CC----ceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeE
Confidence 99999999999998 53 345666545578999999997 58999988666544
No 16
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.28 E-value=4.1e-10 Score=116.68 Aligned_cols=253 Identities=9% Similarity=-0.008 Sum_probs=158.0
Q ss_pred CceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCC-cEEEEeC
Q psy11539 181 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCD-RLWIMDT 258 (530)
Q Consensus 181 ~iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cg-RLWVLDt 258 (530)
.-|.+|++. +++||++--. -.+|..++.... .+..... ...... +.+|..+ +||+.|.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~-----~~~I~~id~~~g----~~~~~~~----------~~~~~~-ia~~~~g~~l~~~d~ 190 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRD-----DPRVRLISVDDN----KVTTVHP----------GFKGGK-PAVTKDKQRVYSIGW 190 (409)
T ss_dssp CCEEEEEECSTTEEEEEETT-----TTEEEEEETTTT----EEEEEEE----------TCCBCB-CEECTTSSEEEEEBS
T ss_pred CCceEEEEeCCCCEEEEecC-----CCcEEEEECCCC----EEEEeec----------cCCCCc-eeEecCCCcEEEEec
Confidence 369999997 7999999531 236778876422 2221110 012233 6777776 4888887
Q ss_pred CCCCcccCccccCCCEEEEEECCCCcEEEEE-ECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCe
Q psy11539 259 GVTNILSSIQQLCPPKIMVFDLKTNTLIRKY-ILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT 337 (530)
Q Consensus 259 G~~~~~~~~~~~c~PKLvvfDL~Td~li~~y-~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~ 337 (530)
+.. -+|+.||..++...+++ .++. .......++++| .+++.+|++|. ...|.+||..++.
T Consensus 191 ~~~-----------~~I~~~d~~~~~~~~~~g~~~~---~~~~~p~~iav~----p~~g~lyv~d~-~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 191 EGT-----------HTVYVYMKASGWAPTRIGQLGS---TFSGKIGAVALD----ETEEWLYFVDS-NKNFGRFNVKTQE 251 (409)
T ss_dssp STT-----------CEEEEEEGGGTTCEEEEEECCT---TSCSCCCBCEEC----TTSSEEEEECT-TCEEEEEETTTCC
T ss_pred CCC-----------ceEEEEEcCCCceeEEeeeccc---hhcCCcEEEEEe----CCCCeEEEEEC-CCcEEEEECCCCC
Confidence 531 16999999887665544 2222 124567889998 24789999986 5579999999875
Q ss_pred EEEEcCCCCCcCCCcceeeecCeEeeecCCc--c-ceecCCCcccccccCCCcccccccccccCCccccccccCCCceEE
Q psy11539 338 SYRLTHPYMYPEPTQSTYILDNLKFRWVDGI--F-GMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMY 414 (530)
Q Consensus 338 swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi--~-GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LY 414 (530)
.-.+..... .| ..+. . ||+++|++ +.||
T Consensus 252 ~~~~~~~~~-----------~g-----~~~~~P~~~ia~~p~~---------------------------------g~ly 282 (409)
T 3hrp_A 252 VTLIKQLEL-----------SG-----SLGTNPGPYLIYYFVD---------------------------------SNFY 282 (409)
T ss_dssp EEEEEECCC-----------CS-----CCCCSSCCEEEEETTT---------------------------------TEEE
T ss_pred EEEEecccc-----------cC-----CCCCCccccEEEeCCC---------------------------------CEEE
Confidence 433211100 00 0011 2 78888754 6899
Q ss_pred EEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEcc-CCCeEEEEe-CCCCcccc
Q psy11539 415 FHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLV-TKHSVGCWN-TKTKVYLP 492 (530)
Q Consensus 415 f~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~-~~~aI~cWn-t~~~~~~~ 492 (530)
+.-....++++++..-- ...+........ ...-.+.......+.|+++|.+|.||+++. ..+.|.+|+ .+ +..
T Consensus 283 v~d~~~~~I~~~~~~g~-~~~~~g~~~~~g-~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~-G~v-- 357 (409)
T 3hrp_A 283 MSDQNLSSVYKITPDGE-CEWFCGSATQKT-VQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD-GYV-- 357 (409)
T ss_dssp EEETTTTEEEEECTTCC-EEEEEECTTCCS-CBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT-TEE--
T ss_pred EEeCCCCEEEEEecCCC-EEEEEeCCCCCC-cCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC-CEE--
Confidence 99888888988864210 000000000000 000011111124689999999999999999 999999999 44 532
Q ss_pred CceeEEeec------------CCceeecceeEEecCCcEEEEEeeceee
Q psy11539 493 QTQDIVQTS------------RDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 493 ~n~~lV~~d------------~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
..++.. ..+|.+|.+++++.+|+|||....|++|
T Consensus 358 ---~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~I 403 (409)
T 3hrp_A 358 ---STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAI 403 (409)
T ss_dssp ---EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEE
T ss_pred ---EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeE
Confidence 333322 1248899999999999999999988775
No 17
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.28 E-value=5.4e-10 Score=113.40 Aligned_cols=195 Identities=12% Similarity=0.041 Sum_probs=137.3
Q ss_pred CceEEEEEEEe-CCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 238 SLISVFRMSVD-KCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 238 ~LvSV~rv~ID-~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
.+..+.++.+| ..++||+.|.+. .+|..+++.+..+...+. . .......|+|| ..++
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~------------~~I~r~~~~g~~~~~~~~--~----~~~~p~glavd----~~~g 128 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTL------------DRILRANLNGSNVEEVVS--T----GLESPGGLAVD----WVHD 128 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTT------------TEEEEEETTSCSCEEEEC--S----SCSCCCEEEEE----TTTT
T ss_pred CCCceEEEEEeccccEEEEEeccC------------CceEEEecCCCCceEEEe--C----CCCCccEEEEe----cCCC
Confidence 35668999999 588999999875 459999998765433211 1 12345789999 3578
Q ss_pred EEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccc
Q psy11539 317 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHH 396 (530)
Q Consensus 317 ~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~ 396 (530)
.+|++|.+...|.|+++.... .+++.. .+ + ....|||++|.+
T Consensus 129 ~ly~~d~~~~~I~~~~~dG~~-~~~l~~-------------~~--l---~~P~~iavdp~~------------------- 170 (349)
T 3v64_C 129 KLYWTDSGTSRIEVANLDGAH-RKVLLW-------------QS--L---EKPRAIALHPME------------------- 170 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCS-CEEEEC-------------TT--C---SCEEEEEEETTT-------------------
T ss_pred eEEEEcCCCCeEEEEcCCCCc-eEEEEe-------------CC--C---CCcceEEEecCc-------------------
Confidence 999999999999999988542 222210 00 0 123588998865
Q ss_pred cCCccccccccCCCceEEEEeCCC-CeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEEEEc
Q psy11539 397 YNGTNVDKTIRDDQRYMYFHSMSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMFYNL 474 (530)
Q Consensus 397 ~~~~~~~~~~~~~~r~LYf~plsS-~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LYft~ 474 (530)
+.|||+-... .++++++.+ .+ ..+.+...+ ...+.|+++| .+|.||+++
T Consensus 171 --------------g~ly~td~~~~~~I~r~~~d----G~----------~~~~~~~~~-~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 171 --------------GTIYWTDWGNTPRIEASSMD----GS----------GRRIIADTH-LFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp --------------TEEEEEECSSSCEEEEEETT----SC----------SCEESCCSS-CSCEEEEEEETTTTEEEEEE
T ss_pred --------------CeEEEeccCCCCEEEEEeCC----CC----------CcEEEEECC-CCCcceEEEeCCCCEEEEEE
Confidence 7899998877 888888642 11 111222211 2468999999 799999999
Q ss_pred cCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 475 VTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 475 ~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
...+.|.+++.+ +. +..++.. ..+.+|+||+++ +|+||++...++.|
T Consensus 222 ~~~~~I~~~~~d-G~----~~~~~~~--~~~~~P~giav~-~~~ly~td~~~~~V 268 (349)
T 3v64_C 222 AKHHVIERANLD-GS----HRKAVIS--QGLPHPFAITVF-EDSLYWTDWHTKSI 268 (349)
T ss_dssp TTTTEEEEEETT-SC----SCEEEEC--SSCSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred CCCCEEEEEeCC-CC----ceEEEEe--CCCCCceEEEEE-CCEEEEecCCCCeE
Confidence 999999999998 63 2334443 348899999995 78999988766544
No 18
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.27 E-value=1.7e-09 Score=101.73 Aligned_cols=231 Identities=11% Similarity=0.120 Sum_probs=154.0
Q ss_pred CCceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeC
Q psy11539 180 NNLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDT 258 (530)
Q Consensus 180 n~iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDt 258 (530)
...|.++.+. +|++|++... . ..|..++.. + .+..|+.- .....+.++.+|+.|+|||.+.
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~--~---~~v~~~d~~--~---~~~~~~~~--------~~~~~~~~i~~~~~g~l~v~~~ 75 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHK--A---NMISCINLD--G---KITEYPLP--------TPDAKVMCLTISSDGEVWFTEN 75 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETT--T---TEEEEECTT--C---CEEEEECS--------STTCCEEEEEECTTSCEEEEET
T ss_pred CCCccceEECCCCCEEEEecC--C---CcEEEEcCC--C---CeEEecCC--------cccCceeeEEECCCCCEEEeCC
Confidence 3578999997 7999998532 1 267777653 2 22222110 1125688999999999999987
Q ss_pred CCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeE
Q psy11539 259 GVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 259 G~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~s 338 (530)
+. .+|..||++ ++ ++++.+|. .......|++| .++.+|+++....+|.+||. +++.
T Consensus 76 ~~------------~~i~~~~~~-g~-~~~~~~~~----~~~~~~~i~~~-----~~g~l~v~~~~~~~i~~~d~-~g~~ 131 (299)
T 2z2n_A 76 AA------------NKIGRITKK-GI-IKEYTLPN----PDSAPYGITEG-----PNGDIWFTEMNGNRIGRITD-DGKI 131 (299)
T ss_dssp TT------------TEEEEECTT-SC-EEEEECSS----TTCCEEEEEEC-----TTSCEEEEETTTTEEEEECT-TCCE
T ss_pred CC------------CeEEEECCC-Cc-EEEEeCCC----cCCCceeeEEC-----CCCCEEEEecCCceEEEECC-CCCE
Confidence 63 349999986 55 35566653 23556788888 56789999998899999999 6655
Q ss_pred EEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeC
Q psy11539 339 YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSM 418 (530)
Q Consensus 339 wRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pl 418 (530)
.++... .. + ..+.+|++++++ .||+...
T Consensus 132 ~~~~~~----~~--------~------~~~~~i~~~~~g----------------------------------~l~v~~~ 159 (299)
T 2z2n_A 132 REYELP----NK--------G------SYPSFITLGSDN----------------------------------ALWFTEN 159 (299)
T ss_dssp EEEECS----ST--------T------CCEEEEEECTTS----------------------------------CEEEEET
T ss_pred EEecCC----CC--------C------CCCceEEEcCCC----------------------------------CEEEEeC
Confidence 543321 10 0 134577777653 5888777
Q ss_pred CCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccccCceeEE
Q psy11539 419 SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIV 498 (530)
Q Consensus 419 sS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~lV 498 (530)
.+..+++++. +... . .+. +.. ....+.++++|.+|.||++....+.|.+||+. +.+. .+
T Consensus 160 ~~~~i~~~~~----~g~~-------~-~~~-~~~--~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-----~~ 218 (299)
T 2z2n_A 160 QNNAIGRITE----SGDI-------T-EFK-IPT--PASGPVGITKGNDDALWFVEIIGNKIGRITTS-GEIT-----EF 218 (299)
T ss_dssp TTTEEEEECT----TCCE-------E-EEE-CSS--TTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CCEE-----EE
T ss_pred CCCEEEEEcC----CCcE-------E-Eee-CCC--CCCcceeEEECCCCCEEEEccCCceEEEECCC-CcEE-----EE
Confidence 6677888764 1111 0 010 111 12357789999999999999888999999985 6432 22
Q ss_pred eecCCceeecceeEEecCCcEEEEEeec
Q psy11539 499 QTSRDILNFREEGEEEEEKENTCTFLVN 526 (530)
Q Consensus 499 ~~d~~~L~~Pd~l~Id~dG~lYv~~~sn 526 (530)
.. ...+..|.++.++.+|.+||....+
T Consensus 219 ~~-~~~~~~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 219 KI-PTPNARPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp EC-SSTTCCEEEEEECSTTCEEEEETTT
T ss_pred EC-CCCCCCceeEEECCCCCEEEeccCC
Confidence 21 2346779999999999999976443
No 19
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.26 E-value=6.3e-10 Score=114.42 Aligned_cols=195 Identities=13% Similarity=0.044 Sum_probs=137.2
Q ss_pred CceEEEEEEEe-CCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 238 SLISVFRMSVD-KCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 238 ~LvSV~rv~ID-~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
.+..+.++.+| ..++||+.|.+. .+|..+++.+..+...+. . .......|+|| ..++
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~------------~~I~r~~~~g~~~~~~~~--~----~~~~p~glavd----~~~g 171 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTL------------DRILRANLNGSNVEEVVS--T----GLESPGGLAVD----WVHD 171 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTT------------TEEEEEETTSCCEEEEEC--S----SCSCCCCEEEE----TTTT
T ss_pred CCCccEEEEEecCCCeEEEEeCCC------------CcEEEEecCCCCcEEEEe--C----CCCCccEEEEE----eCCC
Confidence 46678999999 588999999875 359999997765443221 1 12345789999 3578
Q ss_pred EEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccc
Q psy11539 317 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHH 396 (530)
Q Consensus 317 ~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~ 396 (530)
.+|++|.+...|.|+++.......+... + + ....|||++|.+
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~~~~~l~~~--------------~--l---~~P~giavdp~~------------------- 213 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGAHRKVLLWQ--------------S--L---EKPRAIALHPME------------------- 213 (386)
T ss_dssp EEEEEETTTTEEEECBTTSCSCEEEECS--------------S--C---SCEEEEEEETTT-------------------
T ss_pred eEEEEcCCCCeEEEEeCCCCceEEeecC--------------C--C---CCCcEEEEEcCC-------------------
Confidence 9999999999999999875422111110 0 1 123588988865
Q ss_pred cCCccccccccCCCceEEEEeCCC-CeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEEEEc
Q psy11539 397 YNGTNVDKTIRDDQRYMYFHSMSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMFYNL 474 (530)
Q Consensus 397 ~~~~~~~~~~~~~~r~LYf~plsS-~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LYft~ 474 (530)
+.|||+-... .++++++.+ .+ ..+.+...+ ...+.|+++| ..|.||+++
T Consensus 214 --------------g~ly~td~~~~~~I~r~~~d----G~----------~~~~~~~~~-~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 214 --------------GTIYWTDWGNTPRIEASSMD----GS----------GRRIIADTH-LFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp --------------TEEEEEECSSSCEEEEEETT----SC----------SCEEEECSS-CSCEEEEEEEGGGTEEEEEE
T ss_pred --------------CeEEEeccCCCCEEEEEeCC----CC----------CcEEEEECC-CCCeeeEEEeCCCCEEEEEE
Confidence 7899998877 888888642 11 112222222 2468999999 889999999
Q ss_pred cCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 475 VTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 475 ~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
...+.|.+++.+ +. +...+.. ..+.+|+||+++ +++||++...++.|
T Consensus 265 ~~~~~I~~~d~d-G~----~~~~~~~--~~~~~P~giav~-~~~ly~td~~~~~V 311 (386)
T 3v65_B 265 AKHHVIERANLD-GS----HRKAVIS--QGLPHPFAITVF-EDSLYWTDWHTKSI 311 (386)
T ss_dssp TTTTEEEEECTT-SC----SCEEEEC--SSCSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred CCCCEEEEEeCC-CC----eeEEEEE--CCCCCceEEEEE-CCEEEEeeCCCCeE
Confidence 999999999998 53 2334443 348899999995 67999988766554
No 20
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.25 E-value=9.3e-10 Score=103.54 Aligned_cols=190 Identities=9% Similarity=0.112 Sum_probs=133.4
Q ss_pred ceEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEE
Q psy11539 239 LISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 318 (530)
Q Consensus 239 LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~A 318 (530)
+..+.++.+|..|+|||.+.+. .+|.+||+. +++. .+.++.. ......|++| .++.+
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~------------~~v~~~~~~-~~~~-~~~~~~~----~~~~~~i~~~-----~~g~l 75 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKA------------NKISSLDQS-GRIK-EFEVPTP----DAKVMCLIVS-----SLGDI 75 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTT------------TEEEEECTT-SCEE-EEECSST----TCCEEEEEEC-----TTSCE
T ss_pred CCCcceeeECCCCCEEEEcCCC------------CeEEEECCC-CceE-EEECCCC----CCcceeEEEC-----CCCCE
Confidence 5678899999999999999753 359999997 6654 4666532 3456788887 56789
Q ss_pred EEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccC
Q psy11539 319 YVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYN 398 (530)
Q Consensus 319 YItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~ 398 (530)
||++.+..+|.+||.. ++..++..+ .. + ..+.+|++++++
T Consensus 76 ~v~~~~~~~v~~~d~~-g~~~~~~~~----~~--------~------~~~~~i~~~~~g--------------------- 115 (300)
T 2qc5_A 76 WFTENGANKIGKLSKK-GGFTEYPLP----QP--------D------SGPYGITEGLNG--------------------- 115 (300)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEECS----ST--------T------CCEEEEEECSTT---------------------
T ss_pred EEEecCCCeEEEECCC-CCeEEecCC----CC--------C------CCCccceECCCC---------------------
Confidence 9999988899999988 655433321 00 0 134577777653
Q ss_pred CccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCC
Q psy11539 399 GTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKH 478 (530)
Q Consensus 399 ~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~ 478 (530)
.||+....+..+++++.+ ... . .+. +.. ....+.++++|.+|.||+++...+
T Consensus 116 -------------~l~v~~~~~~~i~~~~~~----g~~-------~-~~~-~~~--~~~~~~~i~~d~~g~l~v~~~~~~ 167 (300)
T 2qc5_A 116 -------------DIWFTQLNGDRIGKLTAD----GTI-------Y-EYD-LPN--KGSYPAFITLGSDNALWFTENQNN 167 (300)
T ss_dssp -------------CEEEEETTTTEEEEECTT----SCE-------E-EEE-CSS--TTCCEEEEEECTTSSEEEEETTTT
T ss_pred -------------CEEEEccCCCeEEEECCC----CCE-------E-Ecc-CCC--CCCCceeEEECCCCCEEEEecCCC
Confidence 588888777788888642 111 0 111 111 124578899999999999999889
Q ss_pred eEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeec
Q psy11539 479 SVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVN 526 (530)
Q Consensus 479 aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~sn 526 (530)
.|.+++.+ +.+. .+.. ...+.+|.++.++.+|+|||....+
T Consensus 168 ~i~~~~~~-g~~~-----~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~ 208 (300)
T 2qc5_A 168 SIGRITNT-GKLE-----EYPL-PTNAAAPVGITSGNDGALWFVEIMG 208 (300)
T ss_dssp EEEEECTT-CCEE-----EEEC-SSTTCCEEEEEECTTSSEEEEETTT
T ss_pred eEEEECCC-CcEE-----EeeC-CCCCCCcceEEECCCCCEEEEccCC
Confidence 99999986 6442 2222 3456789999999999999976543
No 21
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.25 E-value=2.7e-10 Score=106.71 Aligned_cols=188 Identities=11% Similarity=0.036 Sum_probs=125.3
Q ss_pred EEEEEEEeCCCcEEE-EeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 241 SVFRMSVDKCDRLWI-MDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 241 SV~rv~ID~cgRLWV-LDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
.+.++.+|..|+||| .|.+. -+|.+||..+.... .+.. ........|++| .++.+|
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~------------~~i~~~~~~~~~~~-~~~~-----~~~~~p~~i~~~-----~~g~l~ 81 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMY------------GRVVKLATGSTGTT-VLPF-----NGLYQPQGLAVD-----GAGTVY 81 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSS------------CEEEEECC-----E-ECCC-----CSCCSCCCEEEC-----TTCCEE
T ss_pred CccceEECCCCCEEEEccCCC------------CcEEEecCCCcccc-eEee-----CCcCCcceeEEC-----CCCCEE
Confidence 899999999999999 88764 34899998665432 2211 122456788998 456799
Q ss_pred EecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCC
Q psy11539 320 VNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNG 399 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~ 399 (530)
|+|. ..+|.+||..++..+.+.. .+ ...+.+|++++++
T Consensus 82 v~~~-~~~i~~~d~~~~~~~~~~~--------------~~-----~~~p~~i~~~~~g---------------------- 119 (270)
T 1rwi_B 82 VTDF-NNRVVTLAAGSNNQTVLPF--------------DG-----LNYPEGLAVDTQG---------------------- 119 (270)
T ss_dssp EEET-TTEEEEECTTCSCCEECCC--------------CS-----CSSEEEEEECTTC----------------------
T ss_pred EEcC-CCEEEEEeCCCceEeeeec--------------CC-----cCCCcceEECCCC----------------------
Confidence 9998 7799999988775443221 00 0134578887764
Q ss_pred ccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCe
Q psy11539 400 TNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHS 479 (530)
Q Consensus 400 ~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~a 479 (530)
.||+.......+++++..-... .....+ ....+.++++|.+|.||+++...+.
T Consensus 120 ------------~l~v~~~~~~~i~~~~~~~~~~------------~~~~~~---~~~~p~~i~~~~~g~l~v~~~~~~~ 172 (270)
T 1rwi_B 120 ------------AVYVADRGNNRVVKLAAGSKTQ------------TVLPFT---GLNDPDGVAVDNSGNVYVTDTDNNR 172 (270)
T ss_dssp ------------CEEEEEGGGTEEEEECTTCCSC------------EECCCC---SCCSCCCEEECTTCCEEEEEGGGTE
T ss_pred ------------CEEEEECCCCEEEEEECCCcee------------Eeeccc---cCCCceeEEEeCCCCEEEEECCCCE
Confidence 4888877777788874321100 000111 1135789999999999999998899
Q ss_pred EEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeece
Q psy11539 480 VGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNK 527 (530)
Q Consensus 480 I~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr 527 (530)
|.+|+.+ +.. ........+..|.+|+++.+|+|||....+.
T Consensus 173 i~~~~~~-~~~------~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~ 213 (270)
T 1rwi_B 173 VVKLEAE-SNN------QVVLPFTDITAPWGIAVDEAGTVYVTEHNTN 213 (270)
T ss_dssp EEEECTT-TCC------EEECCCSSCCSEEEEEECTTCCEEEEETTTS
T ss_pred EEEEecC-CCc------eEeecccCCCCceEEEECCCCCEEEEECCCC
Confidence 9999998 422 1121223468899999999999999776554
No 22
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.23 E-value=4.3e-09 Score=98.94 Aligned_cols=231 Identities=11% Similarity=0.119 Sum_probs=153.4
Q ss_pred CceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeCC
Q psy11539 181 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTG 259 (530)
Q Consensus 181 ~iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDtG 259 (530)
..|.++.+. +|++|++.-. . ..|..++.. + .++.+.. ......+.++.+|++|+|||.+.+
T Consensus 57 ~~~~~i~~~~~g~l~v~~~~--~---~~i~~~~~~--g---~~~~~~~--------~~~~~~~~~i~~~~~g~l~v~~~~ 118 (299)
T 2z2n_A 57 AKVMCLTISSDGEVWFTENA--A---NKIGRITKK--G---IIKEYTL--------PNPDSAPYGITEGPNGDIWFTEMN 118 (299)
T ss_dssp CCEEEEEECTTSCEEEEETT--T---TEEEEECTT--S---CEEEEEC--------SSTTCCEEEEEECTTSCEEEEETT
T ss_pred CceeeEEECCCCCEEEeCCC--C---CeEEEECCC--C---cEEEEeC--------CCcCCCceeeEECCCCCEEEEecC
Confidence 568999996 7899998532 2 257777643 1 1222210 012346889999999999999976
Q ss_pred CCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEE
Q psy11539 260 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSY 339 (530)
Q Consensus 260 ~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~sw 339 (530)
. -+|.+||+ ++++. .+.++. .......|++| .++.+|+++....+|.+||. +++..
T Consensus 119 ~------------~~i~~~d~-~g~~~-~~~~~~----~~~~~~~i~~~-----~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 119 G------------NRIGRITD-DGKIR-EYELPN----KGSYPSFITLG-----SDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp T------------TEEEEECT-TCCEE-EEECSS----TTCCEEEEEEC-----TTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred C------------ceEEEECC-CCCEE-EecCCC----CCCCCceEEEc-----CCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 3 34999999 66654 455543 23456788888 56799999998899999999 67554
Q ss_pred EEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeCC
Q psy11539 340 RLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMS 419 (530)
Q Consensus 340 Rv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pls 419 (530)
++... .. ...+.+|++++++ .||+....
T Consensus 175 ~~~~~----~~--------------~~~~~~i~~~~~g----------------------------------~l~v~~~~ 202 (299)
T 2z2n_A 175 EFKIP----TP--------------ASGPVGITKGNDD----------------------------------ALWFVEII 202 (299)
T ss_dssp EEECS----ST--------------TCCEEEEEECTTS----------------------------------SEEEEETT
T ss_pred EeeCC----CC--------------CCcceeEEECCCC----------------------------------CEEEEccC
Confidence 43211 00 0124477877664 48888777
Q ss_pred CCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccccCceeEEe
Q psy11539 420 SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQ 499 (530)
Q Consensus 420 S~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~lV~ 499 (530)
+..+++++. +... ..+. +. .....+.++++|.+|+||++....+.|.+||++ +.+ ..+.
T Consensus 203 ~~~i~~~~~----~g~~--------~~~~-~~--~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~-g~~-----~~~~ 261 (299)
T 2z2n_A 203 GNKIGRITT----SGEI--------TEFK-IP--TPNARPHAITAGAGIDLWFTEWGANKIGRLTSN-NII-----EEYP 261 (299)
T ss_dssp TTEEEEECT----TCCE--------EEEE-CS--STTCCEEEEEECSTTCEEEEETTTTEEEEEETT-TEE-----EEEE
T ss_pred CceEEEECC----CCcE--------EEEE-CC--CCCCCceeEEECCCCCEEEeccCCceEEEECCC-Cce-----EEEe
Confidence 777888763 1111 0111 11 112457899999999999999889999999987 643 2222
Q ss_pred ecCCceeecceeEEecCCcEEEEEeecee
Q psy11539 500 TSRDILNFREEGEEEEEKENTCTFLVNKY 528 (530)
Q Consensus 500 ~d~~~L~~Pd~l~Id~dG~lYv~~~snr~ 528 (530)
. ......|.++.+ .+|.||+....+++
T Consensus 262 ~-~~~~~~~~~i~~-~~g~l~v~~~~~~l 288 (299)
T 2z2n_A 262 I-QIKSAEPHGICF-DGETIWFAMECDKI 288 (299)
T ss_dssp C-SSSSCCEEEEEE-CSSCEEEEETTTEE
T ss_pred C-CCCCCccceEEe-cCCCEEEEecCCcE
Confidence 1 233567899999 99999997655554
No 23
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.21 E-value=3.6e-10 Score=118.72 Aligned_cols=203 Identities=14% Similarity=0.075 Sum_probs=136.7
Q ss_pred CCCCceEEEEEEEeC---CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeec
Q psy11539 235 NCNSLISVFRMSVDK---CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVE 311 (530)
Q Consensus 235 nc~~LvSV~rv~ID~---cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~ 311 (530)
+|..|.++.+|.+|+ .|+|||.|.+ .+|..||++++++..... .......|++|
T Consensus 134 ~a~~~~~P~gvavd~~s~~g~Lyv~D~~-------------~~I~~id~~~g~v~~~~~-------~~~~P~giavd--- 190 (433)
T 4hw6_A 134 DCGAFDNIWRMMFDPNSNYDDLYWVGQR-------------DAFRHVDFVNQYVDIKTT-------NIGQCADVNFT--- 190 (433)
T ss_dssp SCCCCSCCCEEEECTTTTTCEEEEECBT-------------SCEEEEETTTTEEEEECC-------CCSCEEEEEEC---
T ss_pred HhcccCCCceEEEccccCCCEEEEEeCC-------------CCEEEEECCCCEEEEeec-------CCCCccEEEEC---
Confidence 355799999999997 5999999997 139999999888764322 34567899998
Q ss_pred CCCCeEEEEecCCC----CeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCc
Q psy11539 312 DCDHVFAYVNDVFR----YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPY 387 (530)
Q Consensus 312 ~c~~~~AYItDsg~----~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~ 387 (530)
.++.+||+|.+. .++++++...+..+. ..+. .+ ....|||++++.
T Consensus 191 --~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~--------------~~~~--~~---~~P~giavd~~~---------- 239 (433)
T 4hw6_A 191 --LNGDMVVVDDQSSDTNTGIYLFTRASGFTER--------------LSLC--NA---RGAKTCAVHPQN---------- 239 (433)
T ss_dssp --TTCCEEEEECCSCTTSEEEEEECGGGTTCCE--------------EEEE--EC---SSBCCCEECTTT----------
T ss_pred --CCCCEEEEcCCCCcccceEEEEECCCCeecc--------------cccc--cc---CCCCEEEEeCCC----------
Confidence 444599999853 467777664331110 0011 11 245678888743
Q ss_pred ccccccccccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCC
Q psy11539 388 EYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSN 467 (530)
Q Consensus 388 ~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~ 467 (530)
..||+.-....++++++.+- .. ....+...|.. ....++++|.+
T Consensus 240 -----------------------G~lyv~d~~~~~V~~~d~~~---g~-------~~~~~~~~~~~---~~~~~ia~dpd 283 (433)
T 4hw6_A 240 -----------------------GKIYYTRYHHAMISSYDPAT---GT-------LTEEEVMMDTK---GSNFHIVWHPT 283 (433)
T ss_dssp -----------------------CCEEECBTTCSEEEEECTTT---CC-------EEEEEEECSCC---SSCEEEEECTT
T ss_pred -----------------------CeEEEEECCCCEEEEEECCC---Ce-------EEEEEeccCCC---CCcccEEEeCC
Confidence 57999999888999987531 11 10111122221 23457999988
Q ss_pred Cc-EEEEccCCCeEEEEeCC--CCccccCceeEEeec------------CCceeecceeEE---------ecCCcEEEEE
Q psy11539 468 GV-MFYNLVTKHSVGCWNTK--TKVYLPQTQDIVQTS------------RDILNFREEGEE---------EEEKENTCTF 523 (530)
Q Consensus 468 G~-LYft~~~~~aI~cWnt~--~~~~~~~n~~lV~~d------------~~~L~~Pd~l~I---------d~dG~lYv~~ 523 (530)
|. ||+++...+.|.+++.+ ++.+. +..+++.. ..+|.+|.++++ +.+|+|||..
T Consensus 284 G~~LYvad~~~~~I~~~~~d~~~~~~~--~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD 361 (433)
T 4hw6_A 284 GDWAYIIYNGKHCIYRVDYNRETGKLA--VPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCD 361 (433)
T ss_dssp SSEEEEEETTTTEEEEEEBCTTTCCBC--CCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcccC--cEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEE
Confidence 87 99999999999998754 22231 11233321 236889999999 9999999999
Q ss_pred eeceee
Q psy11539 524 LVNKYV 529 (530)
Q Consensus 524 ~snr~~ 529 (530)
..|.+|
T Consensus 362 ~~n~~I 367 (433)
T 4hw6_A 362 RDSHTV 367 (433)
T ss_dssp TTTTEE
T ss_pred CCCCEE
Confidence 888765
No 24
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.19 E-value=2.4e-09 Score=102.18 Aligned_cols=192 Identities=10% Similarity=0.011 Sum_probs=130.8
Q ss_pred ceEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeE
Q psy11539 239 LISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 317 (530)
Q Consensus 239 LvSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~ 317 (530)
...+.++.+|. .++||+.|.+. .+|.+||+.+..+... ++. .......|++| ..++.
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~------------~~I~~~~~~g~~~~~~--~~~----~~~~p~~ia~d----~~~~~ 92 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISE------------PSIGRASLHGGEPTTI--IRQ----DLGSPEGIALD----HLGRT 92 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTT------------TEEEEEESSSCCCEEE--ECT----TCCCEEEEEEE----TTTTE
T ss_pred CCcEEEEEEecCCCEEEEEECCC------------CEEEEEecCCCCcEEE--EEC----CCCCccEEEEE----ecCCe
Confidence 35678999997 67999999875 4599999977654322 211 12456889998 24689
Q ss_pred EEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccccc
Q psy11539 318 AYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHY 397 (530)
Q Consensus 318 AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~ 397 (530)
+|++|.+...|.++|+.......+.. .+ + ....||+++|++
T Consensus 93 lyv~d~~~~~I~~~~~~g~~~~~~~~--------------~~--~---~~P~~i~vd~~~-------------------- 133 (267)
T 1npe_A 93 IFWTDSQLDRIEVAKMDGTQRRVLFD--------------TG--L---VNPRGIVTDPVR-------------------- 133 (267)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEC--------------SS--C---SSEEEEEEETTT--------------------
T ss_pred EEEEECCCCEEEEEEcCCCCEEEEEE--------------CC--C---CCccEEEEeeCC--------------------
Confidence 99999999999999987542211110 00 1 134588888864
Q ss_pred CCccccccccCCCceEEEEeCC--CCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcC-CCcEEEEc
Q psy11539 398 NGTNVDKTIRDDQRYMYFHSMS--SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINS-NGVMFYNL 474 (530)
Q Consensus 398 ~~~~~~~~~~~~~r~LYf~pls--S~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~-~G~LYft~ 474 (530)
+.||+.-.. +.+++++..+ .. ..+.+...+ ...+.|+++|. .+.||+++
T Consensus 134 -------------g~lyv~~~~~~~~~I~~~~~d----g~----------~~~~~~~~~-~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 134 -------------GNLYWTDWNRDNPKIETSHMD----GT----------NRRILAQDN-LGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp -------------TEEEEEECCSSSCEEEEEETT----SC----------CCEEEECTT-CSCEEEEEEETTTTEEEEEE
T ss_pred -------------CEEEEEECCCCCcEEEEEecC----CC----------CcEEEEECC-CCCCcEEEEcCCCCEEEEEE
Confidence 789998876 4677776531 11 111222111 24689999996 57999999
Q ss_pred cCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeecee
Q psy11539 475 VTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKY 528 (530)
Q Consensus 475 ~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~ 528 (530)
...+.|.+++.+ +.. ...+.. .+.+|.+++++ +|+||++...+..
T Consensus 186 ~~~~~I~~~~~~-g~~----~~~~~~---~~~~P~gi~~d-~~~lyva~~~~~~ 230 (267)
T 1npe_A 186 AGTHRAECLNPA-QPG----RRKVLE---GLQYPFAVTSY-GKNLYYTDWKTNS 230 (267)
T ss_dssp TTTTEEEEEETT-EEE----EEEEEE---CCCSEEEEEEE-TTEEEEEETTTTE
T ss_pred CCCCEEEEEecC-CCc----eEEEec---CCCCceEEEEe-CCEEEEEECCCCe
Confidence 999999999998 521 223322 47889999998 6899998765433
No 25
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.17 E-value=9e-10 Score=115.29 Aligned_cols=202 Identities=11% Similarity=0.056 Sum_probs=137.4
Q ss_pred CCCCceEEEEEEEe--CCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecC
Q psy11539 235 NCNSLISVFRMSVD--KCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVED 312 (530)
Q Consensus 235 nc~~LvSV~rv~ID--~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~ 312 (530)
.|.+|.++.++.+| ..++|||+|.+ .+|.+||++++++..... .......|++|
T Consensus 132 ~~~~~~~P~~lavdp~~~g~Lyv~d~~-------------~~I~~id~~~~~v~~~~~-------~~~~P~~ia~d---- 187 (430)
T 3tc9_A 132 DCGGFGGAVWLSFDPKNHNHLYLVGEQ-------------HPTRLIDFEKEYVSTVYS-------GLSKVRTICWT---- 187 (430)
T ss_dssp GCBCCSCCCEEEEETTEEEEEEEEEBT-------------EEEEEEETTTTEEEEEEC-------CCSCEEEEEEC----
T ss_pred HccCCCCCCEEEECCCCCCeEEEEeCC-------------CcEEEEECCCCEEEEEec-------CCCCcceEEEe----
Confidence 35679999999999 46999999997 249999998877654332 34567889998
Q ss_pred CCCeEEEEecCCC----CeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcc
Q psy11539 313 CDHVFAYVNDVFR----YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYE 388 (530)
Q Consensus 313 c~~~~AYItDsg~----~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~ 388 (530)
-++.++|++|... ..+++++...+..++ ..+ .-..+..|||++|+.
T Consensus 188 ~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~------------~~l-------~~~~~p~giavdp~~----------- 237 (430)
T 3tc9_A 188 HEADSMIITNDQNNNDRPNNYILTRESGFKVI------------TEL-------TKGQNCNGAETHPIN----------- 237 (430)
T ss_dssp TTSSEEEEEECCSCTTSEEEEEEEGGGTSCSE------------EEE-------EECSSCCCEEECTTT-----------
T ss_pred CCCCEEEEEeCCCCcccceEEEEeCCCceeee------------eee-------ccCCCceEEEEeCCC-----------
Confidence 2456799999853 356667654331100 011 111245688888843
Q ss_pred cccccccccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCC
Q psy11539 389 YYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNG 468 (530)
Q Consensus 389 ~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G 468 (530)
..||+.-+...++++++.+-- . . ..+..++. ...+.|+++|.+|
T Consensus 238 ----------------------g~lyv~d~~~~~V~~~~~~~~---~-------~-~~~~~~~~---~~~P~gia~~pdG 281 (430)
T 3tc9_A 238 ----------------------GELYFNSWNAGQVFRYDFTTQ---E-------T-TPLFTIQD---SGWEFHIQFHPSG 281 (430)
T ss_dssp ----------------------CCEEEEETTTTEEEEEETTTT---E-------E-EEEEECSS---SSCCEEEEECTTS
T ss_pred ----------------------CEEEEEECCCCEEEEEECCCC---c-------E-EEEEEcCC---CCcceeEEEcCCC
Confidence 579999999999999975310 0 0 01112222 2358899999999
Q ss_pred c-EEEEccCCCeEEEEeCCCC---ccccCceeEEeec------------CCceeecc-eeEEe--------cCCcEEEEE
Q psy11539 469 V-MFYNLVTKHSVGCWNTKTK---VYLPQTQDIVQTS------------RDILNFRE-EGEEE--------EEKENTCTF 523 (530)
Q Consensus 469 ~-LYft~~~~~aI~cWnt~~~---~~~~~n~~lV~~d------------~~~L~~Pd-~l~Id--------~dG~lYv~~ 523 (530)
. ||+++...+.|.+++.+ + .+. +..+++.. ..+|..|. +++++ .+|+|||..
T Consensus 282 ~~lyv~d~~~~~I~~~~~d-~~~~~~~--~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD 358 (430)
T 3tc9_A 282 NYAYIVVVNQHYILRSDYD-WKTKRLT--TPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCD 358 (430)
T ss_dssp SEEEEEETTTTEEEEEEEE-TTTTEEC--CCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEE
T ss_pred CEEEEEECCCCEEEEEeCC-ccccccc--ceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEE
Confidence 8 99999999999998876 3 221 12233321 23588999 89984 679999999
Q ss_pred eeceee
Q psy11539 524 LVNKYV 529 (530)
Q Consensus 524 ~snr~~ 529 (530)
..|++|
T Consensus 359 ~~n~~I 364 (430)
T 3tc9_A 359 RENHCI 364 (430)
T ss_dssp GGGTEE
T ss_pred CCCcEE
Confidence 888765
No 26
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.16 E-value=3.4e-09 Score=109.81 Aligned_cols=198 Identities=12% Similarity=0.081 Sum_probs=135.4
Q ss_pred CceEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCc---EEEEEECCCcccccCccccceEEEeecCC
Q psy11539 238 SLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNT---LIRKYILPTAQVFEGSLFSNIVTEVVEDC 313 (530)
Q Consensus 238 ~LvSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~---li~~y~~P~~v~~~~S~lndIvVDv~~~c 313 (530)
.+..+.++.+|. .++||+.|.+. .+|..+++.... ...+ .+.. .......|+||.
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~------------~~I~~~~~~g~~~~~~~~~-~~~~----~~~~p~glavD~---- 168 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDT-VISR----DIQAPDGLAVDW---- 168 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTT------------TEEEEEEC------CCCEE-EECS----SCSCEEEEEEET----
T ss_pred ccCcceEEeeeeccCceEEEecCC------------CeEEEEEcccCCCCCcceE-EEeC----CCCCcccEEEEe----
Confidence 467889999996 78999999975 358999986532 1111 1111 123467899992
Q ss_pred CCeEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccc
Q psy11539 314 DHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYN 393 (530)
Q Consensus 314 ~~~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~ 393 (530)
.++.+|++|.+...|.|+|++......+... + + ....|||++|.+
T Consensus 169 ~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~--------------~--~---~~P~~iavdp~~---------------- 213 (400)
T 3p5b_L 169 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--------------N--G---SKPRAIVVDPVH---------------- 213 (400)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCSEEEEEEC--------------S--S---CCEEEEEEETTT----------------
T ss_pred cCCceEEEECCCCeEEEEeCCCCceEEEEeC--------------C--C---CCcceEEEeccc----------------
Confidence 4789999999999999999985532222110 0 0 123588998865
Q ss_pred ccccCCccccccccCCCceEEEEeCCC-CeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEE
Q psy11539 394 VHHYNGTNVDKTIRDDQRYMYFHSMSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMF 471 (530)
Q Consensus 394 ~~~~~~~~~~~~~~~~~r~LYf~plsS-~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LY 471 (530)
+.|||+-... .+++++..+ .+ ..+.+...+ ...+.|+++| .+|.||
T Consensus 214 -----------------g~ly~td~~~~~~I~~~~~d----G~----------~~~~~~~~~-l~~P~glavd~~~~~lY 261 (400)
T 3p5b_L 214 -----------------GFMYWTDWGTPAKIKKGGLN----GV----------DIYSLVTEN-IQWPNGITLDLLSGRLY 261 (400)
T ss_dssp -----------------TEEEEEECSSSCCEEEEETT----SC----------SCEEEECSS-CSCEEEEEEETTTTEEE
T ss_pred -----------------CeEEEEeCCCCCEEEEEeCC----CC----------ccEEEEECC-CCceEEEEEEeCCCEEE
Confidence 7899988653 677777532 11 112222211 2478999999 889999
Q ss_pred EEccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 472 YNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 472 ft~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
+++...+.|.++|.+ +. +..++......+.+|.+|+++ +++||++...++.|
T Consensus 262 ~aD~~~~~I~~~d~d-G~----~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V 313 (400)
T 3p5b_L 262 WVDSKLHSISSIDVN-GG----NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI 313 (400)
T ss_dssp EEETTTTEEEEEETT-SC----CCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSE
T ss_pred EEECCCCEEEEEeCC-CC----ccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeE
Confidence 999999999999998 63 344566555678999999996 56899988766544
No 27
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.16 E-value=4.8e-09 Score=105.69 Aligned_cols=196 Identities=9% Similarity=-0.020 Sum_probs=135.9
Q ss_pred CceEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 238 SLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 238 ~LvSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
++..+.++..|. .++||+.|.+. .+|..+++.+......+ +.. .......|+|| ..++
T Consensus 33 ~~~~~~~ld~d~~~~~lyw~D~~~------------~~I~r~~~~g~~~~~~~-~~~----~l~~p~glavd----~~~g 91 (318)
T 3sov_A 33 GLEDAAAVDFVFSHGLIYWSDVSE------------EAIKRTEFNKTESVQNV-VVS----GLLSPDGLACD----WLGE 91 (318)
T ss_dssp EEEEEEEEEEEGGGTEEEEEETTT------------TEEEEEETTSSSCCCEE-EEE----CCSCCCEEEEE----TTTT
T ss_pred CCCccEEEEEEeCCCEEEEEECCC------------CcEEEEEccCCCceEEE-EcC----CCCCccEEEEE----cCCC
Confidence 467888999997 68999999975 45999999776321111 101 12346789999 3578
Q ss_pred EEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccc
Q psy11539 317 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHH 396 (530)
Q Consensus 317 ~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~ 396 (530)
.+|++|.+...|.|+++... ..+++.. .+ + ....|||++|.+
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~-~~~~l~~-------------~~--~---~~P~giavdp~~------------------- 133 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGS-LRKVLFW-------------QE--L---DQPRAIALDPSS------------------- 133 (318)
T ss_dssp EEEEEETTTTEEEEEETTSC-SCEEEEC-------------SS--C---SSEEEEEEEGGG-------------------
T ss_pred eEEEEECCCCEEEEEECCCC-cEEEEEe-------------CC--C---CCccEEEEeCCC-------------------
Confidence 99999999999999998754 2222210 00 1 123588998865
Q ss_pred cCCccccccccCCCceEEEEeCC-CCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEEEEc
Q psy11539 397 YNGTNVDKTIRDDQRYMYFHSMS-SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMFYNL 474 (530)
Q Consensus 397 ~~~~~~~~~~~~~~r~LYf~pls-S~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LYft~ 474 (530)
+.|||+-.. ..++++++.+ .+ ..+.+...+ ...+.|+++| .+|.||+++
T Consensus 134 --------------g~ly~td~~~~~~I~r~~~d----G~----------~~~~~~~~~-l~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 134 --------------GFMYWTDWGEVPKIERAGMD----GS----------SRFIIINSE-IYWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp --------------TEEEEEECSSSCEEEEEETT----SC----------SCEEEECSS-CSCEEEEEEETTTTEEEEEE
T ss_pred --------------CEEEEEecCCCCEEEEEEcC----CC----------CeEEEEECC-CCCccEEEEeccCCEEEEEE
Confidence 789999864 5788888642 11 111222221 2468999999 689999999
Q ss_pred cCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 475 VTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 475 ~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
...+.|.++|.+ +. +..++.. ..+.+|.|++++ ++.+|++...++.|
T Consensus 185 ~~~~~I~~~d~d-G~----~~~~~~~--~~~~~P~glav~-~~~lywtd~~~~~V 231 (318)
T 3sov_A 185 AKLNFIHKSNLD-GT----NRQAVVK--GSLPHPFALTLF-EDILYWTDWSTHSI 231 (318)
T ss_dssp TTTTEEEEEETT-SC----SCEEEEC--SCCSCEEEEEEE-TTEEEEEETTTTEE
T ss_pred CCCCEEEEEcCC-CC----ceEEEec--CCCCCceEEEEe-CCEEEEEecCCCeE
Confidence 999999999998 63 3345543 468999999998 56899987766544
No 28
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.15 E-value=1.8e-09 Score=116.68 Aligned_cols=228 Identities=15% Similarity=0.142 Sum_probs=145.8
Q ss_pred CCCCceEEEEEEEeC--CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEE-----
Q psy11539 235 NCNSLISVFRMSVDK--CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVT----- 307 (530)
Q Consensus 235 nc~~LvSV~rv~ID~--cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvV----- 307 (530)
+|.+|..+.+|.+|+ .++|||+|.+. -+|.++|++++++......... ....+.+|++
T Consensus 134 ~~~~~~~p~~la~dp~~~~~Lyv~~~~~------------~~i~~ID~~~~~v~~l~~~~~~---~~~~p~~ia~~~~~~ 198 (496)
T 3kya_A 134 KCCGFSDNGRLAFDPLNKDHLYICYDGH------------KAIQLIDLKNRMLSSPLNINTI---PTNRIRSIAFNKKIE 198 (496)
T ss_dssp SCBCCCSEEEEEEETTEEEEEEEEEETE------------EEEEEEETTTTEEEEEECCTTS---SCSBEEEEEECCCBT
T ss_pred cccccCCCCEEEEccCCCCEEEEEECCC------------CeEEEEECCCCEEEEEEccCcc---ccCCCcEEEEeeccc
Confidence 477788999999995 68999999763 2499999999888765554321 2234788888
Q ss_pred --EeecCCCCeEEEEecCCC------CeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCccc
Q psy11539 308 --EVVEDCDHVFAYVNDVFR------YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSG 379 (530)
Q Consensus 308 --Dv~~~c~~~~AYItDsg~------~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~ 379 (530)
| .++.++||+|... .++++++...+..| ..-+.. ..+. .+ .+..||+++|++
T Consensus 199 ~~d----~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~-------~~~~~~--~~v~----~~-~~p~giavdp~~-- 258 (496)
T 3kya_A 199 GYA----DEAEYMIVAIDYDGKGDESPSVYIIKRNADGTF-------DDRSDI--QLIA----AY-KQCNGATIHPIN-- 258 (496)
T ss_dssp TTB----CTTCEEEEEECCCTTGGGEEEEEEEECCTTSCC-------STTSCE--EEEE----EE-SCCCCEEECTTT--
T ss_pred ccC----CCCCEEEEEeCCCCCcccCceEEEEecCCCCce-------eecccc--eeec----cC-CCceEEEEcCCC--
Confidence 6 2456899999875 45888875542111 100000 1111 12 256788888764
Q ss_pred ccccCCCcccccccccccCCccccccccCCCceEEEEeCCCCeeEEEecch----hcCccccCCc-cccccceEEecccc
Q psy11539 380 YKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTD----LRNSSRYVNS-SDIDEYFHYLGSRF 454 (530)
Q Consensus 380 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~----Lrn~s~~~~~-~~~~~~v~~lG~rG 454 (530)
+.||++-....++|+++.+. ......+.+. ....-.++.+...+
T Consensus 259 -------------------------------g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~ 307 (496)
T 3kya_A 259 -------------------------------GELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA 307 (496)
T ss_dssp -------------------------------CCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS
T ss_pred -------------------------------CeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecC
Confidence 78999999999999998651 1122221000 00000122222222
Q ss_pred CCCCCcceEEcCCCc-EEEEccCCCeEEEEeCCCCcccc-CceeEEeec------------CCceeecc-eeEEe-----
Q psy11539 455 KNTQASASAINSNGV-MFYNLVTKHSVGCWNTKTKVYLP-QTQDIVQTS------------RDILNFRE-EGEEE----- 514 (530)
Q Consensus 455 ~~sqs~G~aiD~~G~-LYft~~~~~aI~cWnt~~~~~~~-~n~~lV~~d------------~~~L~~Pd-~l~Id----- 514 (530)
..+.+.++++|.+|. ||+++..++.|.+++.+ +.... .+..+++.. ..+|.+|. ++.++
T Consensus 308 ~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d-g~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~ 386 (496)
T 3kya_A 308 DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD-EIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYT 386 (496)
T ss_dssp SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE-TTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCC
T ss_pred CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC-CCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcccccc
Confidence 223567999999998 89999999999997654 32100 011233321 23688999 88888
Q ss_pred --cCCcEEEEEeeceee
Q psy11539 515 --EEKENTCTFLVNKYV 529 (530)
Q Consensus 515 --~dG~lYv~~~snr~~ 529 (530)
.+|.|||....|++|
T Consensus 387 ~~~~g~lyVaD~~N~rI 403 (496)
T 3kya_A 387 GEEEYDFYFVDRLNFCV 403 (496)
T ss_dssp SSCCEEEEEEEGGGTEE
T ss_pred ccCCCeEEEEECCCCEE
Confidence 789999999999876
No 29
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.14 E-value=7.9e-09 Score=99.19 Aligned_cols=227 Identities=8% Similarity=-0.077 Sum_probs=138.6
Q ss_pred CCceeeeEEe-CCe-EEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEe
Q psy11539 180 NNLPLGIGIW-RST-IFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMD 257 (530)
Q Consensus 180 n~iP~GV~v~-~gR-lFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLD 257 (530)
...|.|+.+. +++ +|++--+ .| +|..++... + ++.|.. ....+.++.+|..|+|||.+
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~--~~---~i~~~~~~~-~----~~~~~~----------~~~~~~~l~~~~dg~l~v~~ 86 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVR--QN---RTWAWSDDG-Q----LSPEMH----------PSHHQNGHCLNKQGHLIACS 86 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGG--GT---EEEEEETTS-C----EEEEES----------SCSSEEEEEECTTCCEEEEE
T ss_pred CccccCCeEeCCCCEEEEEeCC--CC---EEEEEECCC-C----eEEEEC----------CCCCcceeeECCCCcEEEEe
Confidence 4468899997 555 6655322 22 677777542 1 222211 11347889999999999999
Q ss_pred CCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC-------------
Q psy11539 258 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF------------- 324 (530)
Q Consensus 258 tG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg------------- 324 (530)
.|. ..|.+||++++++........ ......+++|++| .++.+|++|+.
T Consensus 87 ~~~------------~~i~~~d~~~g~~~~~~~~~~--~~~~~~~~~i~~d-----~~G~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 87 HGL------------RRLERQREPGGEWESIADSFE--GKKLNSPNDVCLA-----PDGSLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp TTT------------TEEEEECSTTCCEEEEECEET--TEECCCCCCEEEC-----TTSCEEEEECSHHHHCGGGSSCCC
T ss_pred cCC------------CeEEEEcCCCCcEEEEeeccC--CCCCCCCCCEEEC-----CCCCEEEECCcccccccccccccc
Confidence 874 249999999998654322211 1223457899998 57789999862
Q ss_pred ----CCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCc
Q psy11539 325 ----RYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGT 400 (530)
Q Consensus 325 ----~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~ 400 (530)
..+|..+|.. ++..++... .....||+++|++
T Consensus 148 ~~~~~~~l~~~~~~-g~~~~~~~~--------------------~~~~~gi~~s~dg----------------------- 183 (296)
T 3e5z_A 148 MELPGRWVFRLAPD-GTLSAPIRD--------------------RVKPNGLAFLPSG----------------------- 183 (296)
T ss_dssp CCSSSCEEEEECTT-SCEEEEECC--------------------CSSEEEEEECTTS-----------------------
T ss_pred ccCCCcEEEEECCC-CCEEEeecC--------------------CCCCccEEECCCC-----------------------
Confidence 2467777766 544333211 0123588998886
Q ss_pred cccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeE
Q psy11539 401 NVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSV 480 (530)
Q Consensus 401 ~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI 480 (530)
+.| +......++++++.+ .+..+ ....+.+ +. ..+.+.|+++|++|+||++. .+.|
T Consensus 184 ----------~~l-v~~~~~~~i~~~~~~--~~g~~-------~~~~~~~-~~-~~~~p~~i~~d~~G~l~v~~--~~~v 239 (296)
T 3e5z_A 184 ----------NLL-VSDTGDNATHRYCLN--ARGET-------EYQGVHF-TV-EPGKTDGLRVDAGGLIWASA--GDGV 239 (296)
T ss_dssp ----------CEE-EEETTTTEEEEEEEC--SSSCE-------EEEEEEE-CC-SSSCCCSEEEBTTSCEEEEE--TTEE
T ss_pred ----------CEE-EEeCCCCeEEEEEEC--CCCcC-------cCCCeEe-eC-CCCCCCeEEECCCCCEEEEc--CCeE
Confidence 566 666666678777643 11111 0011122 11 12468899999999999999 7899
Q ss_pred EEEeCCCCccccCceeEEeecCCceeecceeEEe-cCC-cEEEE
Q psy11539 481 GCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEE-EEK-ENTCT 522 (530)
Q Consensus 481 ~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id-~dG-~lYv~ 522 (530)
.+||++ +.. +..+.. ... |..+.++ .+| .|||.
T Consensus 240 ~~~~~~-g~~----~~~~~~-~~~---~~~~~f~~~d~~~L~v~ 274 (296)
T 3e5z_A 240 HVLTPD-GDE----LGRVLT-PQT---TSNLCFGGPEGRTLYMT 274 (296)
T ss_dssp EEECTT-SCE----EEEEEC-SSC---CCEEEEESTTSCEEEEE
T ss_pred EEECCC-CCE----EEEEEC-CCC---ceeEEEECCCCCEEEEE
Confidence 999998 643 223332 222 7777774 343 46663
No 30
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.14 E-value=8.8e-10 Score=108.87 Aligned_cols=185 Identities=15% Similarity=0.119 Sum_probs=119.4
Q ss_pred CceEEEEEEEeCCCcEEEEeCCCCCccc---Cc---------cccCCCEEEEEECCCCcEEEEEECCCcccccCccccce
Q psy11539 238 SLISVFRMSVDKCDRLWIMDTGVTNILS---SI---------QQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNI 305 (530)
Q Consensus 238 ~LvSV~rv~ID~cgRLWVLDtG~~~~~~---~~---------~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndI 305 (530)
.|-.|.+|.+|+.|+|||.|.+...... .. .......|++||..++++++.+.- . ......+|
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~--~---~~~~p~gi 96 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK--N---LFYLPHGL 96 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT--T---TCSSEEEE
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC--C---ccCCceEE
Confidence 4788999999999999999998621100 00 011234799999999999865432 1 12456789
Q ss_pred EEEeecCCCCeEEEEecCCCCeEEEEEccCC--eEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCccccccc
Q psy11539 306 VTEVVEDCDHVFAYVNDVFRYGLIVYDFFKN--TSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYK 383 (530)
Q Consensus 306 vVDv~~~c~~~~AYItDsg~~gLIVyDl~~g--~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~ 383 (530)
++| .++.+||+|.....|.+||.... ....+-... .+.. ....+. ...|||++|+.
T Consensus 97 a~d-----~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~-~~g~-------~~~~~~---~P~~ia~~~~~------ 154 (329)
T 3fvz_A 97 SID-----TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSM-QPGS-------DQNHFC---QPTDVAVEPST------ 154 (329)
T ss_dssp EEC-----TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTT-BCCC-------STTCCS---SEEEEEECTTT------
T ss_pred EEC-----CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccC-CCCC-------CccccC---CCcEEEEeCCC------
Confidence 998 56679999999999999998755 233332210 0000 001111 34578888743
Q ss_pred CCCcccccccccccCCccccccccCCCceEEEEeC-CCCeeEEEecchhcCccccCCccccccceEEeccc--------c
Q psy11539 384 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSM-SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSR--------F 454 (530)
Q Consensus 384 ~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pl-sS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~r--------G 454 (530)
..||++-- ...++++++. +.. .+..+|.. +
T Consensus 155 ---------------------------g~lyv~d~~~~~~I~~~~~----~g~----------~~~~~~~~g~~~~~~~~ 193 (329)
T 3fvz_A 155 ---------------------------GAVFVSDGYCNSRIVQFSP----SGK----------FVTQWGEESSGSSPRPG 193 (329)
T ss_dssp ---------------------------CCEEEEECSSCCEEEEECT----TSC----------EEEEECEECCSSSCCTT
T ss_pred ---------------------------CeEEEEeCCCCCeEEEEcC----CCC----------EEEEeccCCCCCCCCCc
Confidence 46888774 5666776652 111 12223321 1
Q ss_pred CCCCCcceEEcCC-CcEEEEccCCCeEEEEeCCCCcc
Q psy11539 455 KNTQASASAINSN-GVMFYNLVTKHSVGCWNTKTKVY 490 (530)
Q Consensus 455 ~~sqs~G~aiD~~-G~LYft~~~~~aI~cWnt~~~~~ 490 (530)
....+.|+++|.+ |.||+++...+.|.+|+.+++.+
T Consensus 194 ~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~ 230 (329)
T 3fvz_A 194 QFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF 230 (329)
T ss_dssp EESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE
T ss_pred ccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE
Confidence 2245899999976 99999999999999999974443
No 31
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.12 E-value=1.3e-09 Score=104.11 Aligned_cols=245 Identities=5% Similarity=-0.053 Sum_probs=148.8
Q ss_pred CceeeeEEe-CCeEEEEccCCC--CCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCC-CcEEEE
Q psy11539 181 NLPLGIGIW-RSTIFLSFPKWK--AGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKC-DRLWIM 256 (530)
Q Consensus 181 ~iP~GV~v~-~gRlFVTiPR~~--~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~c-gRLWVL 256 (530)
..|.++++. ++++|++.|+-. .....+|..++... + .++.+..-. .......+.++.+|.+ |+|||.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~-g---~~~~~~~~~-----~~~~~~~~~~i~~~~~~g~l~v~ 88 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKT-G---KKTVICKPE-----VNGYGGIPAGCQCDRDANQLFVA 88 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTT-C---CEEEEECCE-----ETTEECCEEEEEECSSSSEEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCC-C---cEEEEEecc-----cCCCCCCCceEEEecCCCcEEEE
Confidence 367899996 789999833210 00112577776432 1 222221100 0011245889999999 999999
Q ss_pred eCCCCCcccCccccCCCEEEEEECCCCcEEEE-EECCCcccccCccccceEEEeecCCCCeEEEEecCCC----------
Q psy11539 257 DTGVTNILSSIQQLCPPKIMVFDLKTNTLIRK-YILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR---------- 325 (530)
Q Consensus 257 DtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~-y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~---------- 325 (530)
+.+. .|++||++ +++.+. ...... .......+|++| .++.+||++...
T Consensus 89 ~~~~-------------~l~~~d~~-g~~~~~~~~~~~~--~~~~~~~~i~~d-----~~g~l~v~~~~~~~~~~~~~~~ 147 (314)
T 1pjx_A 89 DMRL-------------GLLVVQTD-GTFEEIAKKDSEG--RRMQGCNDCAFD-----YEGNLWITAPAGEVAPADYTRS 147 (314)
T ss_dssp ETTT-------------EEEEEETT-SCEEECCSBCTTS--CBCBCCCEEEEC-----TTSCEEEEECBCBCTTSCCCBT
T ss_pred ECCC-------------CEEEEeCC-CCEEEEEeccCCC--ccccCCcCEEEC-----CCCCEEEEecCccccccccccc
Confidence 9752 49999998 776532 222111 223457889998 567899999865
Q ss_pred -----CeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecC----CCcccccccCCCcccccccccc
Q psy11539 326 -----YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAIS----PELSGYKYKRHPYEYYHYNVHH 396 (530)
Q Consensus 326 -----~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALs----p~~~~~~~~~~~~~~y~~~~~~ 396 (530)
.+|.+||.. ++..++... + ....||+++ +++
T Consensus 148 ~~~~~~~l~~~~~~-g~~~~~~~~-----------------~---~~~~~i~~~~~~d~dg------------------- 187 (314)
T 1pjx_A 148 MQEKFGSIYCFTTD-GQMIQVDTA-----------------F---QFPNGIAVRHMNDGRP------------------- 187 (314)
T ss_dssp TSSSCEEEEEECTT-SCEEEEEEE-----------------E---SSEEEEEEEECTTSCE-------------------
T ss_pred ccCCCCeEEEECCC-CCEEEeccC-----------------C---CCcceEEEecccCCCC-------------------
Confidence 578888876 543322100 0 123467777 654
Q ss_pred cCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccC
Q psy11539 397 YNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVT 476 (530)
Q Consensus 397 ~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~ 476 (530)
+.||+......++++++.+- +..+. ....+..+... ....+.++++|++|+||++...
T Consensus 188 --------------~~l~v~~~~~~~i~~~~~~~--~g~~~-----~~~~~~~~~~~-~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 188 --------------YQLIVAETPTKKLWSYDIKG--PAKIE-----NKKVWGHIPGT-HEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp --------------EEEEEEETTTTEEEEEEEEE--TTEEE-----EEEEEEECCCC-SSCEEEEEEEBTTCCEEEEEET
T ss_pred --------------CEEEEEECCCCeEEEEECCC--CCccc-----cceEEEECCCC-CCCCCCceEECCCCCEEEEEcC
Confidence 68899887777888886431 11110 00111222110 0024788999999999999988
Q ss_pred CCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCc-EEEEEe
Q psy11539 477 KHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKE-NTCTFL 524 (530)
Q Consensus 477 ~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~-lYv~~~ 524 (530)
.+.|.+||++++.+. ..+.. ...+|.++.++.+|. |||...
T Consensus 246 ~~~i~~~d~~~g~~~----~~~~~---~~~~~~~i~~~~dg~~l~v~~~ 287 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPK----MRIRC---PFEKPSNLHFKPQTKTIFVTEH 287 (314)
T ss_dssp TTEEEEECTTCBSCS----EEEEC---SSSCEEEEEECTTSSEEEEEET
T ss_pred CCEEEEEcCCCCcEe----EEEeC---CCCCceeEEECCCCCEEEEEeC
Confidence 899999999733331 22221 136788999998987 888654
No 32
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.10 E-value=4.4e-09 Score=101.99 Aligned_cols=242 Identities=11% Similarity=0.023 Sum_probs=149.4
Q ss_pred CceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeCC
Q psy11539 181 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTG 259 (530)
Q Consensus 181 ~iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDtG 259 (530)
..|.++.+. +|+||++--. . ..|..++... + .++.+.. ..-..+.++.+|.+|+|||.+.+
T Consensus 45 ~~~~~~~~~~~g~l~~~~~~--~---~~i~~~d~~~-~---~~~~~~~---------~~~~~~~~i~~~~dg~l~v~~~~ 106 (333)
T 2dg1_A 45 LQLEGLNFDRQGQLFLLDVF--E---GNIFKINPET-K---EIKRPFV---------SHKANPAAIKIHKDGRLFVCYLG 106 (333)
T ss_dssp CCEEEEEECTTSCEEEEETT--T---CEEEEECTTT-C---CEEEEEE---------CSSSSEEEEEECTTSCEEEEECT
T ss_pred ccccCcEECCCCCEEEEECC--C---CEEEEEeCCC-C---cEEEEee---------CCCCCcceEEECCCCcEEEEeCC
Confidence 357888886 7889986322 2 2677776542 1 1222110 00134788999999999999876
Q ss_pred CCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC------CCeEEEEEc
Q psy11539 260 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF------RYGLIVYDF 333 (530)
Q Consensus 260 ~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg------~~gLIVyDl 333 (530)
... ....|.+||++++++.+.+.-. .....+++|++| .++.+||++.. ..+|.++|.
T Consensus 107 ~~~--------~~~~i~~~d~~~~~~~~~~~~~----~~~~~~~~i~~d-----~~g~l~v~~~~~~~~~~~~~l~~~~~ 169 (333)
T 2dg1_A 107 DFK--------STGGIFAATENGDNLQDIIEDL----STAYCIDDMVFD-----SKGGFYFTDFRGYSTNPLGGVYYVSP 169 (333)
T ss_dssp TSS--------SCCEEEEECTTSCSCEEEECSS----SSCCCEEEEEEC-----TTSCEEEEECCCBTTBCCEEEEEECT
T ss_pred CCC--------CCceEEEEeCCCCEEEEEEccC----ccCCcccceEEC-----CCCCEEEEeccccccCCCceEEEEeC
Confidence 411 1246999999988765433211 124567889998 56789999875 357888888
Q ss_pred cCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceE
Q psy11539 334 FKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYM 413 (530)
Q Consensus 334 ~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~L 413 (530)
++++..++... + ....+|+++|++ +.|
T Consensus 170 ~~~~~~~~~~~-----------------~---~~~~~i~~~~dg---------------------------------~~l 196 (333)
T 2dg1_A 170 DFRTVTPIIQN-----------------I---SVANGIALSTDE---------------------------------KVL 196 (333)
T ss_dssp TSCCEEEEEEE-----------------E---SSEEEEEECTTS---------------------------------SEE
T ss_pred CCCEEEEeecC-----------------C---CcccceEECCCC---------------------------------CEE
Confidence 76654433210 0 124578888875 778
Q ss_pred EEEeCCCCeeEEEecchhcCccccCCccccc-cceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCcccc
Q psy11539 414 YFHSMSSNRHYYVSTTDLRNSSRYVNSSDID-EYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLP 492 (530)
Q Consensus 414 Yf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~-~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~ 492 (530)
|+.......+++++... +.... .... ..+..+. + ...+.++++|++|+||++....+.|.+||++ +..
T Consensus 197 ~v~~~~~~~i~~~d~~~--~g~~~---~~~~~~~~~~~~--~-~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~-- 265 (333)
T 2dg1_A 197 WVTETTANRLHRIALED--DGVTI---QPFGATIPYYFT--G-HEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYP-- 265 (333)
T ss_dssp EEEEGGGTEEEEEEECT--TSSSE---EEEEEEEEEECC--S-SSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCE--
T ss_pred EEEeCCCCeEEEEEecC--CCcCc---ccccceEEEecC--C-CCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCE--
Confidence 88876666787776421 11000 0000 0011111 1 1257889999999999999888899999987 532
Q ss_pred CceeEEeec---CCceeecceeEEecCC-cEEEEE
Q psy11539 493 QTQDIVQTS---RDILNFREEGEEEEEK-ENTCTF 523 (530)
Q Consensus 493 ~n~~lV~~d---~~~L~~Pd~l~Id~dG-~lYv~~ 523 (530)
+..+... ...+.+|.++.++.+| .|||..
T Consensus 266 --~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~ 298 (333)
T 2dg1_A 266 --IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICS 298 (333)
T ss_dssp --EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEE
T ss_pred --EEEEEcCCCccccccCcceEEECCCCCEEEEEe
Confidence 2233221 1224488999998775 777754
No 33
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.10 E-value=1.9e-09 Score=116.38 Aligned_cols=269 Identities=7% Similarity=0.014 Sum_probs=167.0
Q ss_pred ceeeeEEe---CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEE-------eCCC
Q psy11539 182 LPLGIGIW---RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSV-------DKCD 251 (530)
Q Consensus 182 iP~GV~v~---~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~I-------D~cg 251 (530)
-|.|++++ +++|||+-.. . ..|..|+.+... +...=.+ . ...+.++..|.+ |..|
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~--~---~~i~~ID~~~~~----v~~l~~~--~----~~~~~~p~~ia~~~~~~~~d~~G 204 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDG--H---KAIQLIDLKNRM----LSSPLNI--N----TIPTNRIRSIAFNKKIEGYADEA 204 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEET--E---EEEEEEETTTTE----EEEEECC--T----TSSCSBEEEEEECCCBTTTBCTT
T ss_pred CCCEEEEccCCCCEEEEEECC--C---CeEEEEECCCCE----EEEEEcc--C----ccccCCCcEEEEeecccccCCCC
Confidence 58999998 4899999743 1 357788865322 2211111 1 135778999999 9988
Q ss_pred c-EEEEeCCCCCcccCccccCCCEEEEEECCC-CcEE-----EEEECCCcccccCccccceEEEeecCCCCeEEEEecCC
Q psy11539 252 R-LWIMDTGVTNILSSIQQLCPPKIMVFDLKT-NTLI-----RKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF 324 (530)
Q Consensus 252 R-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~T-d~li-----~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg 324 (530)
+ |+|.|.+.-.. ...+.+..++.+. +++. +.+. .....+.+++| -.++++|++|.+
T Consensus 205 ~~lyvad~~~~~~------~~~~~V~~i~r~~~G~~~~~~~~~~v~-------~~~~p~giavd----p~~g~LYvtd~~ 267 (496)
T 3kya_A 205 EYMIVAIDYDGKG------DESPSVYIIKRNADGTFDDRSDIQLIA-------AYKQCNGATIH----PINGELYFNSYE 267 (496)
T ss_dssp CEEEEEECCCTTG------GGEEEEEEEECCTTSCCSTTSCEEEEE-------EESCCCCEEEC----TTTCCEEEEETT
T ss_pred CEEEEEeCCCCCc------ccCceEEEEecCCCCceeecccceeec-------cCCCceEEEEc----CCCCeEEEEECC
Confidence 7 99999875110 1236688888655 2331 1221 12345788888 247999999999
Q ss_pred CCeEEEEEcc-------CCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccccc
Q psy11539 325 RYGLIVYDFF-------KNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHY 397 (530)
Q Consensus 325 ~~gLIVyDl~-------~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~ 397 (530)
...|.+||++ +++.|.-.++.. +......+.+.+ ....++||++|++
T Consensus 268 ~g~V~r~d~~~~~~~~~tg~~~tp~~~~~-~g~~~~l~~~~~-----~~~p~~ia~~p~G-------------------- 321 (496)
T 3kya_A 268 KGQVFRLDLVDYFKTIKNGGSWDPIVKNN-PNTFKQLFTIAD-----PSWEFQIFIHPTG-------------------- 321 (496)
T ss_dssp TTEEEEECHHHHHHHHHTTCCCCCBGGGC-TTTEEEEEECSS-----SSCCEEEEECTTS--------------------
T ss_pred CCEEEEEecccccccccCceeeccccccc-ccccceeEecCC-----CCCceEEEEcCCC--------------------
Confidence 9999999998 787653211100 000000011111 0123688998876
Q ss_pred CCccccccccCCCceEEEEeCCCCeeEEEecchhc----Ccc-ccCCccccccceEE-eccccCCCCCc-ceEEc-----
Q psy11539 398 NGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLR----NSS-RYVNSSDIDEYFHY-LGSRFKNTQAS-ASAIN----- 465 (530)
Q Consensus 398 ~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lr----n~s-~~~~~~~~~~~v~~-lG~rG~~sqs~-G~aiD----- 465 (530)
+.||++-...+++++++..--. ... +....+. ..+.. .+......++. |+++|
T Consensus 322 -------------~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~--~G~~DG~~~~a~f~~P~~gv~vd~~~~~ 386 (496)
T 3kya_A 322 -------------KYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQ--SGYRDDVGTEARMNNPCQGVFVKNPDYT 386 (496)
T ss_dssp -------------SEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTB--CCCBCCBGGGCBCSSEEEEEEEECTTCC
T ss_pred -------------CEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCC--CcccCCcccccccCCCeEEEEEcccccc
Confidence 7899999999999998642210 000 0000000 00000 01111224566 88888
Q ss_pred --CCCcEEEEccCCCeEEEEeCCCCccccCceeEEeec---------------C------CceeecceeEEecC-CcEEE
Q psy11539 466 --SNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTS---------------R------DILNFREEGEEEEE-KENTC 521 (530)
Q Consensus 466 --~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~lV~~d---------------~------~~L~~Pd~l~Id~d-G~lYv 521 (530)
.+|.||+++..++.|.+++++ +.. ..++-. + .+|.+|.||+++.+ |.|||
T Consensus 387 ~~~~g~lyVaD~~N~rIr~i~~~-G~v-----~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyV 460 (496)
T 3kya_A 387 GEEEYDFYFVDRLNFCVRKVTPE-GIV-----STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYV 460 (496)
T ss_dssp SSCCEEEEEEEGGGTEEEEECTT-CBE-----EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEE
T ss_pred ccCCCeEEEEECCCCEEEEEeCC-CCE-----EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEE
Confidence 789999999999999999987 633 334321 1 25899999999996 99999
Q ss_pred EEeeceee
Q psy11539 522 TFLVNKYV 529 (530)
Q Consensus 522 ~~~snr~~ 529 (530)
....|++|
T Consensus 461 aD~~N~rI 468 (496)
T 3kya_A 461 HDQVGHTI 468 (496)
T ss_dssp EETTTTEE
T ss_pred EeCCCCEE
Confidence 99999876
No 34
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.08 E-value=4.7e-09 Score=102.19 Aligned_cols=237 Identities=8% Similarity=-0.040 Sum_probs=146.7
Q ss_pred CCCceeeeEEe--CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEE
Q psy11539 179 ENNLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIM 256 (530)
Q Consensus 179 ~n~iP~GV~v~--~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVL 256 (530)
...++.|..++ +++||++--. . .+|..++.... .++.+. . . ..+..+..|..|+|||.
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~--~---~~i~~~d~~~~----~~~~~~-----~----~--~~~~~i~~~~dG~l~v~ 70 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIP--A---KKVCRWDSFTK----QVQRVT-----M----D--APVSSVALRQSGGYVAT 70 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETT--T---TEEEEEETTTC----CEEEEE-----C----S--SCEEEEEEBTTSSEEEE
T ss_pred CCccccCCeEECCCCEEEEEECC--C---CEEEEEECCCC----cEEEEe-----C----C--CceEEEEECCCCCEEEE
Confidence 35578899886 5788887432 2 36777876431 111111 0 0 24678899999999997
Q ss_pred eCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCC-----------
Q psy11539 257 DTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR----------- 325 (530)
Q Consensus 257 DtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~----------- 325 (530)
.. -.|.+||++++++......+.. .+...++++++| .++.+|+++.+.
T Consensus 71 ~~--------------~~l~~~d~~~g~~~~~~~~~~~--~~~~~~~di~~d-----~dG~l~~~~~~~~~~~~~~~~~~ 129 (297)
T 3g4e_A 71 IG--------------TKFCALNWKEQSAVVLATVDND--KKNNRFNDGKVD-----PAGRYFAGTMAEETAPAVLERHQ 129 (297)
T ss_dssp ET--------------TEEEEEETTTTEEEEEEECCTT--CSSEEEEEEEEC-----TTSCEEEEEEECCSBTTBCCTTC
T ss_pred EC--------------CeEEEEECCCCcEEEEEecCCC--CCCCCCCCEEEC-----CCCCEEEecCCcccccccccCCC
Confidence 62 1399999999887654444322 234568899998 567799988542
Q ss_pred CeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCcccccc
Q psy11539 326 YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKT 405 (530)
Q Consensus 326 ~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~ 405 (530)
.+|+.+|.. ++..++. . .+ ...+||+++|++
T Consensus 130 ~~l~~~d~~-g~~~~~~---------------~--~~---~~pngi~~spdg---------------------------- 160 (297)
T 3g4e_A 130 GALYSLFPD-HHVKKYF---------------D--QV---DISNGLDWSLDH---------------------------- 160 (297)
T ss_dssp EEEEEECTT-SCEEEEE---------------E--EE---SBEEEEEECTTS----------------------------
T ss_pred cEEEEEECC-CCEEEEe---------------e--cc---ccccceEEcCCC----------------------------
Confidence 345555543 2222111 0 01 123689999886
Q ss_pred ccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeC
Q psy11539 406 IRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNT 485 (530)
Q Consensus 406 ~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt 485 (530)
++||+.-....++++.+... .+..+. ....+..+... .+.++|+++|++|+||++....+.|.+||+
T Consensus 161 -----~~lyv~~~~~~~i~~~~~d~-~~G~~~-----~~~~~~~~~~~--~~~p~g~~~d~~G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 161 -----KIFYYIDSLSYSVDAFDYDL-QTGQIS-----NRRSVYKLEKE--EQIPDGMCIDAEGKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp -----CEEEEEEGGGTEEEEEEECT-TTCCEE-----EEEEEEECCGG--GCEEEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred -----CEEEEecCCCCcEEEEeccC-CCCccc-----CcEEEEECCCC--CCCCCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence 78999888888888776321 111110 01122233221 136899999999999999998899999999
Q ss_pred CCCccccCceeEEeecCCceeecceeEEe-cC-CcEEEEEee
Q psy11539 486 KTKVYLPQTQDIVQTSRDILNFREEGEEE-EE-KENTCTFLV 525 (530)
Q Consensus 486 ~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id-~d-G~lYv~~~s 525 (530)
+++.+ ...+.. . -..|..+++. .+ +.|||+...
T Consensus 228 ~tG~~----~~~i~~-p--~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 228 VTGKR----LQTVKL-P--VDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp TTCCE----EEEEEC-S--SSBEEEEEEESGGGCEEEEEEBC
T ss_pred CCceE----EEEEEC-C--CCCceEEEEeCCCCCEEEEEcCC
Confidence 74433 223322 1 2467888886 33 478886643
No 35
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.06 E-value=1.1e-08 Score=115.81 Aligned_cols=199 Identities=12% Similarity=0.068 Sum_probs=136.1
Q ss_pred CceEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcE--EEEEECCCcccccCccccceEEEeecCCC
Q psy11539 238 SLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTL--IRKYILPTAQVFEGSLFSNIVTEVVEDCD 314 (530)
Q Consensus 238 ~LvSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~l--i~~y~~P~~v~~~~S~lndIvVDv~~~c~ 314 (530)
.+..+.+|.+|. .++||+.|.+. -+|..+++..... ..+..+.. .......|+||. .
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~------------~~I~~~~l~g~~~~~~~~~vi~~----~l~~P~GLAvD~----~ 481 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDTVISR----DIQAPDGLAVDW----I 481 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTT------------TEEEEEEC--------CEEEECS----SCSCCCEEEEET----T
T ss_pred CCCceEEEeecccCCeeEEeeccc------------eeEEEEeccCCCCCcceeEEEec----CCCCcceeeeee----c
Confidence 467789999997 78999999975 3588999865322 11112211 224467899993 4
Q ss_pred CeEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccc
Q psy11539 315 HVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNV 394 (530)
Q Consensus 315 ~~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~ 394 (530)
++.+|++|.+...|.|+++... ..+++-. .+ + ....|||++|..
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~-~~~~l~~-------------~~--l---~~P~gIaVDp~~----------------- 525 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGV-KRKTLFR-------------EN--G---SKPRAIVVDPVH----------------- 525 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSS-SEEEEEE-------------CT--T---CCEEEEEEETTT-----------------
T ss_pred CCcEEEEecCCCeEEEEeCCCC-eEEEEEe-------------CC--C---CCcceEEEecCC-----------------
Confidence 6799999999999999999854 3333310 00 0 123589998875
Q ss_pred cccCCccccccccCCCceEEEEeCCC-CeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEEE
Q psy11539 395 HHYNGTNVDKTIRDDQRYMYFHSMSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMFY 472 (530)
Q Consensus 395 ~~~~~~~~~~~~~~~~r~LYf~plsS-~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LYf 472 (530)
++|||+-... .+++++... .+ ..+.+...+ ...+.|+++| .+|.||+
T Consensus 526 ----------------g~LYwtD~g~~~~I~~~~~d----G~----------~~~~lv~~~-l~~P~GLavD~~~~~LYw 574 (791)
T 3m0c_C 526 ----------------GFMYWTDWGTPAKIKKGGLN----GV----------DIYSLVTEN-IQWPNGITLDLLSGRLYW 574 (791)
T ss_dssp ----------------TEEEEEECSSSCEEEEEETT----SC----------CEEEEECSS-CSCEEEEEEETTTTEEEE
T ss_pred ----------------CCEEEecCCCCCeEEEEecC----CC----------ceEEEEeCC-CCCceEEEEecCCCeEEE
Confidence 7899998765 667766531 11 122233221 2479999999 8899999
Q ss_pred EccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 473 NLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 473 t~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
++...+.|.+.+.+ +.. ..++......|..|-+|+++ +++||++...|+.|
T Consensus 575 aD~~~~~I~~~d~d-G~~----~~~v~~~~~~l~~P~glav~-~~~lYwtD~~~~~I 625 (791)
T 3m0c_C 575 VDSKLHSISSIDVN-GGN----RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI 625 (791)
T ss_dssp EETTTTEEEEEETT-SCS----CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred EeCCCCcEEEEecC-CCc----eEEEecCCCccCCCCEEEEe-CCEEEEEECCCCEE
Confidence 99999999999998 643 34555545678899999996 56999998776654
No 36
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.06 E-value=6.1e-08 Score=96.55 Aligned_cols=228 Identities=12% Similarity=0.026 Sum_probs=146.5
Q ss_pred cCCCceeeeEEe--CCeEEEEccCCCCCCCcEEEEEECCCCC-CCCccCCCCCCCcCCCCCCCCceEEEEEEEeC-CCcE
Q psy11539 178 PENNLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPS-ESPILLPYPNWSYFDDSNCNSLISVFRMSVDK-CDRL 253 (530)
Q Consensus 178 p~n~iP~GV~v~--~gRlFVTiPR~~~GvP~TLa~V~~~~~~-~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~-cgRL 253 (530)
+.-.-|.|++++ +++||++-.. -.+|.+++.+... ++-...-. ..++..+.++.+|. .++|
T Consensus 27 ~~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~----------~~~~~~p~glavd~~~~~l 91 (316)
T 1ijq_A 27 PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVI----------SRDIQAPDGLAVDWIHSNI 91 (316)
T ss_dssp CSCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEE----------CSSCSCCCEEEEETTTTEE
T ss_pred cCCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEE----------eCCCCCcCEEEEeecCCeE
Confidence 334458999997 6899999533 2367777764210 00000000 13467788999995 7899
Q ss_pred EEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCC-CeEEEEE
Q psy11539 254 WIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR-YGLIVYD 332 (530)
Q Consensus 254 WVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~-~gLIVyD 332 (530)
|+.|.+. -+|.++|+..... +++. .. .....++|+|| ..++++|++|.+. +.|.+++
T Consensus 92 y~~d~~~------------~~I~~~~~~g~~~-~~~~-~~----~~~~P~~iavd----p~~g~ly~~d~~~~~~I~~~~ 149 (316)
T 1ijq_A 92 YWTDSVL------------GTVSVADTKGVKR-KTLF-RE----NGSKPRAIVVD----PVHGFMYWTDWGTPAKIKKGG 149 (316)
T ss_dssp EEEETTT------------TEEEEEETTSSSE-EEEE-EC----TTCCEEEEEEE----TTTTEEEEEECSSSCEEEEEE
T ss_pred EEEECCC------------CEEEEEeCCCCce-EEEE-EC----CCCCcceEEeC----CCCCEEEEEccCCCCeEEEEc
Confidence 9999985 3589999965433 2221 11 23457899999 3578999999886 7898998
Q ss_pred ccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCce
Q psy11539 333 FFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRY 412 (530)
Q Consensus 333 l~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~ 412 (530)
+... ..++.. . ..+. ..+|||+++++ +.
T Consensus 150 ~dG~-~~~~~~--------------~-~~~~---~P~gla~d~~~---------------------------------~~ 177 (316)
T 1ijq_A 150 LNGV-DIYSLV--------------T-ENIQ---WPNGITLDLLS---------------------------------GR 177 (316)
T ss_dssp TTSC-CEEEEE--------------C-SSCS---CEEEEEEETTT---------------------------------TE
T ss_pred CCCC-CeEEEE--------------E-CCCC---CceEEEEeccC---------------------------------CE
Confidence 8633 332221 0 0122 23588998765 78
Q ss_pred EEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccc-cCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccc
Q psy11539 413 MYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSR-FKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYL 491 (530)
Q Consensus 413 LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~r-G~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~ 491 (530)
|||.-....++++++.+ .. ..+.+.+. +....+.|+++|. |.||+++...++|.++|..++.
T Consensus 178 lY~~D~~~~~I~~~d~d----g~----------~~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~~~V~~~~~~~g~-- 240 (316)
T 1ijq_A 178 LYWVDSKLHSISSIDVN----GG----------NRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGS-- 240 (316)
T ss_dssp EEEEETTTTEEEEEETT----SC----------SCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCC--
T ss_pred EEEEECCCCeEEEEecC----CC----------ceEEEeecCCccCCcEEEEEEC-CEEEEEECCCCeEEEEeCCCCc--
Confidence 99999888889988742 11 11112111 1224689999985 8999999999999999975242
Q ss_pred cCceeEEeecCCceeecceeEEecC
Q psy11539 492 PQTQDIVQTSRDILNFREEGEEEEE 516 (530)
Q Consensus 492 ~~n~~lV~~d~~~L~~Pd~l~Id~d 516 (530)
...++.. .|..|.||++.+.
T Consensus 241 --~~~~i~~---~~~~p~~i~v~~~ 260 (316)
T 1ijq_A 241 --DVNLLAE---NLLSPEDMVLFHN 260 (316)
T ss_dssp --CCEEEEC---SCSCCCCEEEESG
T ss_pred --ceEEEec---CCCCceEEEEecc
Confidence 2345542 3667899988753
No 37
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.05 E-value=1.9e-08 Score=99.90 Aligned_cols=207 Identities=11% Similarity=-0.008 Sum_probs=136.3
Q ss_pred CCCceeeeEE-eCCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEe
Q psy11539 179 ENNLPLGIGI-WRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMD 257 (530)
Q Consensus 179 ~n~iP~GV~v-~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLD 257 (530)
...-|.+|++ .++++||+-.. . .+|..++..+.. .+.-.+- ......+..+.++.+ ..++|||.|
T Consensus 82 ~~~~p~~i~~~~~g~lyv~~~~--~---~~v~~iD~~t~~---~~~~i~~-----g~~~~~~~~p~~i~~-~~~~lyv~~ 147 (328)
T 3dsm_A 82 GFTSPRYIHFLSDEKAYVTQIW--D---YRIFIINPKTYE---ITGYIEC-----PDMDMESGSTEQMVQ-YGKYVYVNC 147 (328)
T ss_dssp CCSSEEEEEEEETTEEEEEEBS--C---SEEEEEETTTTE---EEEEEEC-----TTCCTTTCBCCCEEE-ETTEEEEEE
T ss_pred CCCCCcEEEEeCCCeEEEEECC--C---CeEEEEECCCCe---EEEEEEc-----CCccccCCCcceEEE-ECCEEEEEc
Confidence 3456899999 58899999642 2 378888865321 1111111 000111234455666 478999999
Q ss_pred CCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCC----------Ce
Q psy11539 258 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR----------YG 327 (530)
Q Consensus 258 tG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~----------~g 327 (530)
.|.. -.|.+||++|+++++++.... ....|++| .++.+|+++.+. ..
T Consensus 148 ~~~~-----------~~v~viD~~t~~~~~~i~~g~-------~p~~i~~~-----~dG~l~v~~~~~~~~~~~~~~~~~ 204 (328)
T 3dsm_A 148 WSYQ-----------NRILKIDTETDKVVDELTIGI-------QPTSLVMD-----KYNKMWTITDGGYEGSPYGYEAPS 204 (328)
T ss_dssp CTTC-----------CEEEEEETTTTEEEEEEECSS-------CBCCCEEC-----TTSEEEEEBCCBCTTCSSCBCCCE
T ss_pred CCCC-----------CEEEEEECCCCeEEEEEEcCC-------CccceEEc-----CCCCEEEEECCCccCCccccCCce
Confidence 7631 359999999999999887632 35788888 567799999875 78
Q ss_pred EEEEEccCCeEEEEcCCCCCcCCCcceeeec-CeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccc
Q psy11539 328 LIVYDFFKNTSYRLTHPYMYPEPTQSTYILD-NLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTI 406 (530)
Q Consensus 328 LIVyDl~~g~swRv~h~sf~pdP~~~~f~I~-G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~ 406 (530)
|.++|.++++.-+.. .+. | .+..+|+++|++
T Consensus 205 v~~id~~t~~v~~~~-------------~~~~g------~~p~~la~~~d~----------------------------- 236 (328)
T 3dsm_A 205 LYRIDAETFTVEKQF-------------KFKLG------DWPSEVQLNGTR----------------------------- 236 (328)
T ss_dssp EEEEETTTTEEEEEE-------------ECCTT------CCCEEEEECTTS-----------------------------
T ss_pred EEEEECCCCeEEEEE-------------ecCCC------CCceeEEEecCC-----------------------------
Confidence 999999988643211 111 1 135688998876
Q ss_pred cCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcC-CCcEEEEc----cCCCeEE
Q psy11539 407 RDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINS-NGVMFYNL----VTKHSVG 481 (530)
Q Consensus 407 ~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~-~G~LYft~----~~~~aI~ 481 (530)
+.||+..- .+|.++++-.+-.. ..+...+ + ..+.|+++|. +|.||+++ ...+.|.
T Consensus 237 ----~~lyv~~~---~v~~~d~~t~~~~~---------~~~~~~~--~--~~p~gi~vdp~~g~lyva~~~~y~~~~~V~ 296 (328)
T 3dsm_A 237 ----DTLYWINN---DIWRMPVEADRVPV---------RPFLEFR--D--TKYYGLTVNPNNGEVYVADAIDYQQQGIVY 296 (328)
T ss_dssp ----CEEEEESS---SEEEEETTCSSCCS---------SCSBCCC--S--SCEEEEEECTTTCCEEEEECTTSSSEEEEE
T ss_pred ----CEEEEEcc---EEEEEECCCCceee---------eeeecCC--C--CceEEEEEcCCCCeEEEEcccccccCCEEE
Confidence 78888643 68888764322110 0110111 1 3689999994 99999999 7889999
Q ss_pred EEeCCCCccc
Q psy11539 482 CWNTKTKVYL 491 (530)
Q Consensus 482 cWnt~~~~~~ 491 (530)
|||++ +.+.
T Consensus 297 v~d~~-g~~~ 305 (328)
T 3dsm_A 297 RYSPQ-GKLI 305 (328)
T ss_dssp EECTT-CCEE
T ss_pred EECCC-CCEE
Confidence 99999 7653
No 38
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.02 E-value=1.9e-07 Score=89.00 Aligned_cols=221 Identities=11% Similarity=0.030 Sum_probs=143.4
Q ss_pred ceeeeEEe--CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeC-CCcEEEEeC
Q psy11539 182 LPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDK-CDRLWIMDT 258 (530)
Q Consensus 182 iP~GV~v~--~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~-cgRLWVLDt 258 (530)
-|.|++++ +++||++-.. . .+|..++.+... .-.+. ..++..+.++.+|. .++|||.|.
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~--~---~~I~~~~~~g~~-~~~~~------------~~~~~~p~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDIS--E---PSIGRASLHGGE-PTTII------------RQDLGSPEGIALDHLGRTIFWTDS 98 (267)
T ss_dssp EEEEEEEETTTTEEEEEETT--T---TEEEEEESSSCC-CEEEE------------CTTCCCEEEEEEETTTTEEEEEET
T ss_pred cEEEEEEecCCCEEEEEECC--C---CEEEEEecCCCC-cEEEE------------ECCCCCccEEEEEecCCeEEEEEC
Confidence 47899997 5899999532 2 378888764211 00110 13466889999997 589999998
Q ss_pred CCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC--CCeEEEEEccCC
Q psy11539 259 GVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF--RYGLIVYDFFKN 336 (530)
Q Consensus 259 G~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg--~~gLIVyDl~~g 336 (530)
+. -+|.++|+..... +.+ ++. .....++|++| .+++++|++|.+ ...|.++++...
T Consensus 99 ~~------------~~I~~~~~~g~~~-~~~-~~~----~~~~P~~i~vd----~~~g~lyv~~~~~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 99 QL------------DRIEVAKMDGTQR-RVL-FDT----GLVNPRGIVTD----PVRGNLYWTDWNRDNPKIETSHMDGT 156 (267)
T ss_dssp TT------------TEEEEEETTSCSC-EEE-ECS----SCSSEEEEEEE----TTTTEEEEEECCSSSCEEEEEETTSC
T ss_pred CC------------CEEEEEEcCCCCE-EEE-EEC----CCCCccEEEEe----eCCCEEEEEECCCCCcEEEEEecCCC
Confidence 75 3599999965432 222 221 12456899999 347999999987 467888887643
Q ss_pred eEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEE
Q psy11539 337 TSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFH 416 (530)
Q Consensus 337 ~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~ 416 (530)
..++... .+ +. ...|||+++++ +.||+.
T Consensus 157 -~~~~~~~-------------~~--~~---~P~gia~d~~~---------------------------------~~lyv~ 184 (267)
T 1npe_A 157 -NRRILAQ-------------DN--LG---LPNGLTFDAFS---------------------------------SQLCWV 184 (267)
T ss_dssp -CCEEEEC-------------TT--CS---CEEEEEEETTT---------------------------------TEEEEE
T ss_pred -CcEEEEE-------------CC--CC---CCcEEEEcCCC---------------------------------CEEEEE
Confidence 2221100 00 11 23578888765 789999
Q ss_pred eCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccccCcee
Q psy11539 417 SMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQD 496 (530)
Q Consensus 417 plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~ 496 (530)
-..+.++++++.+-.. .+.+.+.+ ..+.|+++| .|.||+++...+.|.++|++++.. ..
T Consensus 185 d~~~~~I~~~~~~g~~--------------~~~~~~~~--~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~----~~ 243 (267)
T 1npe_A 185 DAGTHRAECLNPAQPG--------------RRKVLEGL--QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKE----MD 243 (267)
T ss_dssp ETTTTEEEEEETTEEE--------------EEEEEECC--CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEE----EE
T ss_pred ECCCCEEEEEecCCCc--------------eEEEecCC--CCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCc----eE
Confidence 9999999998753210 01111111 357899998 689999999999999999973322 22
Q ss_pred EEeecCCceeecceeEEecCC
Q psy11539 497 IVQTSRDILNFREEGEEEEEK 517 (530)
Q Consensus 497 lV~~d~~~L~~Pd~l~Id~dG 517 (530)
.+. .....-|.|+++..++
T Consensus 244 ~i~--~g~~~~p~gi~~~~~~ 262 (267)
T 1npe_A 244 TFH--PHKQTRLYGITIALSQ 262 (267)
T ss_dssp EEC--CSSCCCCCCEEEECSC
T ss_pred EEc--cccccccceeeecCcc
Confidence 332 2233458999998776
No 39
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.01 E-value=1.3e-07 Score=90.92 Aligned_cols=239 Identities=12% Similarity=0.051 Sum_probs=145.9
Q ss_pred ceeeeEEe--CCeEEEEccCCCC-CCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCc-EEEEe
Q psy11539 182 LPLGIGIW--RSTIFLSFPKWKA-GIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIMD 257 (530)
Q Consensus 182 iP~GV~v~--~gRlFVTiPR~~~-GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgR-LWVLD 257 (530)
-|.+++++ .+++|++...-.. +...+|..++..... .+.-++. -..+.++.++.+|+ |||.+
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~---~~~~~~~-----------~~~~~~~~~s~dg~~l~v~~ 107 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE---VTQAIHN-----------DLKPFGATINNTTQTLWFGN 107 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC---EEEEEEE-----------SSCCCSEEEETTTTEEEEEE
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe---EEEEEec-----------CCCcceEEECCCCCEEEEEe
Confidence 46788887 4689998754211 113467777654321 2222211 01256678888876 99998
Q ss_pred CCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCccccc---CccccceEEEeecCCCCeEEEEecCC-CCeEEEEEc
Q psy11539 258 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFE---GSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIVYDF 333 (530)
Q Consensus 258 tG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~---~S~lndIvVDv~~~c~~~~AYItDsg-~~gLIVyDl 333 (530)
.+. ..|.+||++++++++++.++...... ......++++ .++.++|+++.+ ...|.+||.
T Consensus 108 ~~~------------~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s----~dg~~l~~~~~~~~~~i~~~d~ 171 (353)
T 3vgz_A 108 TVN------------SAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVAD----DATNTVYISGIGKESVIWVVDG 171 (353)
T ss_dssp TTT------------TEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEE----TTTTEEEEEEESSSCEEEEEET
T ss_pred cCC------------CEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEEC----CCCCEEEEEecCCCceEEEEcC
Confidence 864 35999999999999999985432111 1124667887 356789999954 567999999
Q ss_pred cCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceE
Q psy11539 334 FKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYM 413 (530)
Q Consensus 334 ~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~L 413 (530)
.+++..+.... .| ..+.+|+++|++ +.|
T Consensus 172 ~~~~~~~~~~~-------------~~------~~~~~~~~s~dg---------------------------------~~l 199 (353)
T 3vgz_A 172 GNIKLKTAIQN-------------TG------KMSTGLALDSEG---------------------------------KRL 199 (353)
T ss_dssp TTTEEEEEECC-------------CC------TTCCCCEEETTT---------------------------------TEE
T ss_pred CCCceEEEecC-------------CC------CccceEEECCCC---------------------------------CEE
Confidence 98876543320 00 124577888875 778
Q ss_pred EEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCc-EEEEccCCCeEEEEeCCCCcccc
Q psy11539 414 YFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGV-MFYNLVTKHSVGCWNTKTKVYLP 492 (530)
Q Consensus 414 Yf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~-LYft~~~~~aI~cWnt~~~~~~~ 492 (530)
|.... ...++.++..-.+ .... ...+..+......+++++.+|. ||++....+.|.+||..++..
T Consensus 200 ~~~~~-~~~i~~~d~~~~~----------~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-- 265 (353)
T 3vgz_A 200 YTTNA-DGELITIDTADNK----------ILSR-KKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI-- 265 (353)
T ss_dssp EEECT-TSEEEEEETTTTE----------EEEE-EECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE--
T ss_pred EEEcC-CCeEEEEECCCCe----------EEEE-EEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--
Confidence 88765 4457766542211 1111 1222222233566789997765 899988889999999973322
Q ss_pred CceeEEeecCCceeecceeEEecCCc-EEEEE
Q psy11539 493 QTQDIVQTSRDILNFREEGEEEEEKE-NTCTF 523 (530)
Q Consensus 493 ~n~~lV~~d~~~L~~Pd~l~Id~dG~-lYv~~ 523 (530)
...+.. .-|.++.++.+|. +|+..
T Consensus 266 --~~~~~~-----~~~~~~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 266 --LAKVAA-----PESLAVLFNPARNEAYVTH 290 (353)
T ss_dssp --EEEEEC-----SSCCCEEEETTTTEEEEEE
T ss_pred --EEEEEc-----CCCceEEECCCCCEEEEEE
Confidence 112221 2245677777775 66654
No 40
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.99 E-value=2.5e-08 Score=97.89 Aligned_cols=199 Identities=9% Similarity=0.100 Sum_probs=125.1
Q ss_pred CceEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcc--------------cccCcccc
Q psy11539 238 SLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQ--------------VFEGSLFS 303 (530)
Q Consensus 238 ~LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v--------------~~~~S~ln 303 (530)
.|..+.++.+|..|++|++|+.. .+|+.||.+++++. .+..+... ........
T Consensus 17 ~~~~p~~i~~d~~g~~l~v~~~~------------~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~ 83 (322)
T 2fp8_A 17 PSYAPNSFTFDSTNKGFYTSVQD------------GRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTY 83 (322)
T ss_dssp SSSCCCCEECCTTCSSEEEECTT------------SEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEE
T ss_pred ccCCceEEEEcCCCCEEEEEcCC------------CeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCc
Confidence 36677888999999855567643 45999999876653 45433211 00112456
Q ss_pred ceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCC-Ccccccc
Q psy11539 304 NIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISP-ELSGYKY 382 (530)
Q Consensus 304 dIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp-~~~~~~~ 382 (530)
.|++| .+++.+||+|.. .+|++||..+++...+... ..|..+. ..++|++++ ++
T Consensus 84 gi~~~----~~~g~l~v~d~~-~~i~~~d~~~g~~~~~~~~------------~~~~~~~---~p~~i~~d~~~G----- 138 (322)
T 2fp8_A 84 DISYN----LQNNQLYIVDCY-YHLSVVGSEGGHATQLATS------------VDGVPFK---WLYAVTVDQRTG----- 138 (322)
T ss_dssp EEEEE----TTTTEEEEEETT-TEEEEECTTCEECEEEESE------------ETTEECS---CEEEEEECTTTC-----
T ss_pred eEEEc----CCCCcEEEEECC-CCEEEEeCCCCEEEEeccc------------CCCCccc---ccceEEEecCCC-----
Confidence 78888 237899999987 5799999887643332210 1233332 234677777 53
Q ss_pred cCCCcccccccccccCCccccccccCCCceEEEEeCCC-----------------CeeEEEecchhcCccccCCcccccc
Q psy11539 383 KRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSS-----------------NRHYYVSTTDLRNSSRYVNSSDIDE 445 (530)
Q Consensus 383 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS-----------------~~lY~V~T~~Lrn~s~~~~~~~~~~ 445 (530)
.||+.-+.. .++|+++.+- .
T Consensus 139 -----------------------------~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~--------------~ 175 (322)
T 2fp8_A 139 -----------------------------IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST--------------K 175 (322)
T ss_dssp -----------------------------CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT--------------T
T ss_pred -----------------------------EEEEECCcccccccccceehcccCCCceEEEEeCCC--------------C
Confidence 577776542 2355554211 0
Q ss_pred ceEEeccccCCCCCcceEEcCCCc-EEEEccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEe
Q psy11539 446 YFHYLGSRFKNTQASASAINSNGV-MFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFL 524 (530)
Q Consensus 446 ~v~~lG~rG~~sqs~G~aiD~~G~-LYft~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~ 524 (530)
.++.+... ...+.|+++|.+|. ||+++...+.|.+|+.+ +... .+.+++.. ... |+++++|.+|+|||...
T Consensus 176 ~~~~~~~~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~-~~~~-~~~~~~~~-~~g---P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 176 ETTLLLKE--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLE-GPKK-GTAEVLVK-IPN---PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp EEEEEEEE--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESS-STTT-TCEEEEEE-CSS---EEEEEECTTSCEEEEEE
T ss_pred EEEEeccC--CccCcceEECCCCCEEEEEeCCCCeEEEEECC-CCcC-CccceEEe-CCC---CCCeEECCCCCEEEEec
Confidence 11111111 13588999998875 99999999999999988 5432 23444443 222 99999999999999875
Q ss_pred e
Q psy11539 525 V 525 (530)
Q Consensus 525 s 525 (530)
.
T Consensus 248 ~ 248 (322)
T 2fp8_A 248 E 248 (322)
T ss_dssp E
T ss_pred C
Confidence 4
No 41
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.99 E-value=2.7e-08 Score=96.91 Aligned_cols=186 Identities=11% Similarity=0.007 Sum_probs=117.8
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.+.++.+|..|+|||.+.|.. .|..||+. +++........ -.....+++|++| .++.+|+
T Consensus 87 ~~~gl~~d~dG~l~v~~~~~~------------~v~~~~~~-g~~~~~~~~~~--~~~~~~~~~i~~d-----~dG~l~~ 146 (305)
T 3dr2_A 87 FTNGNAVDAQQRLVHCEHGRR------------AITRSDAD-GQAHLLVGRYA--GKRLNSPNDLIVA-----RDGAIWF 146 (305)
T ss_dssp CEEEEEECTTSCEEEEETTTT------------EEEEECTT-SCEEEEECEET--TEECSCCCCEEEC-----TTSCEEE
T ss_pred ccceeeECCCCCEEEEECCCC------------EEEEECCC-CCEEEEEeccC--CCccCCCCCEEEC-----CCCCEEE
Confidence 367889999999999998752 49999985 66432221111 1123457899998 6788999
Q ss_pred ecCC-----------------CCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCccccccc
Q psy11539 321 NDVF-----------------RYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYK 383 (530)
Q Consensus 321 tDsg-----------------~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~ 383 (530)
||+. ..+|.+||.++|+.-++. .+ ...+||+++|++
T Consensus 147 td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~------------------~~---~~p~gl~~spdg------ 199 (305)
T 3dr2_A 147 TDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA------------------DL---DHPNGLAFSPDE------ 199 (305)
T ss_dssp ECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE------------------EE---SSEEEEEECTTS------
T ss_pred eCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe------------------cC---CCCcceEEcCCC------
Confidence 9862 256888888777544322 11 134589999886
Q ss_pred CCCcccccccccccCCccccccccCCCceEEEEeCCC-----CeeEEEecchhcCccccCCccccccceEEeccccCCCC
Q psy11539 384 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSS-----NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQ 458 (530)
Q Consensus 384 ~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS-----~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sq 458 (530)
++||+..... .++++++..- ..+. ..+.+.+. ..+.
T Consensus 200 ---------------------------~~lyv~~~~~~~~~~~~i~~~~~~~---~~l~--------~~~~~~~~-~~~~ 240 (305)
T 3dr2_A 200 ---------------------------QTLYVSQTPEQGHGSVEITAFAWRD---GALH--------DRRHFASV-PDGL 240 (305)
T ss_dssp ---------------------------SEEEEEECCC---CCCEEEEEEEET---TEEE--------EEEEEECC-SSSC
T ss_pred ---------------------------CEEEEEecCCcCCCCCEEEEEEecC---CCcc--------CCeEEEEC-CCCC
Confidence 7888887652 5677665321 0010 01111111 1246
Q ss_pred CcceEEcCCCcEEEEccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCC-cEEEEE
Q psy11539 459 ASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEK-ENTCTF 523 (530)
Q Consensus 459 s~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG-~lYv~~ 523 (530)
++|+++|++|+||++. .+.|.+|+++ +.. +..+.. .+ .|..+.++.++ .|||..
T Consensus 241 pdgi~~d~~G~lwv~~--~~gv~~~~~~-g~~----~~~~~~-~~---~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 241 PDGFCVDRGGWLWSSS--GTGVCVFDSD-GQL----LGHIPT-PG---TASNCTFDQAQQRLFITG 295 (305)
T ss_dssp CCSEEECTTSCEEECC--SSEEEEECTT-SCE----EEEEEC-SS---CCCEEEECTTSCEEEEEE
T ss_pred CCeEEECCCCCEEEec--CCcEEEECCC-CCE----EEEEEC-CC---ceeEEEEeCCCCEEEEEc
Confidence 8999999999999998 4679999998 543 223332 22 37788887555 566643
No 42
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.98 E-value=4.2e-09 Score=117.10 Aligned_cols=196 Identities=12% Similarity=0.074 Sum_probs=130.2
Q ss_pred ceEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCC----cEEEEEECCCcccccCccccceEEEeecCC
Q psy11539 239 LISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN----TLIRKYILPTAQVFEGSLFSNIVTEVVEDC 313 (530)
Q Consensus 239 LvSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td----~li~~y~~P~~v~~~~S~lndIvVDv~~~c 313 (530)
+..+.+|.+|. .++||+.|.+.. +|.++|+.+. ... ..+.. .......|+||.
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~------------~I~~~~~~g~~~~~~~~--~~i~~----~~~~P~glavD~---- 462 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQR------------MICSTQLDRAHGVSSYD--TVISR----DIQAPDGLAVDW---- 462 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTT------------SBEEEESCCCCC-CCCC--CBCCS----CC--CCCEECCC----
T ss_pred CcceEEEccccccCeEEEEecCCC------------eEEEEecCCCCCCcceE--EEEeC----CCCCcceEEEEe----
Confidence 45677888996 689999998752 4888998751 111 01111 123356789983
Q ss_pred CCeEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccc
Q psy11539 314 DHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYN 393 (530)
Q Consensus 314 ~~~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~ 393 (530)
.++.+|++|.+...|.|+|+.......+.... + ....|||++|.+
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~----------------~---~~P~giavDp~~---------------- 507 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFREQ----------------G---SKPRAIVVDPVH---------------- 507 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECCCS----------------S---CCCCCEECCSSS----------------
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEeCC----------------C---CCcceEEEccCC----------------
Confidence 46799999999999999999865333222110 0 123588998875
Q ss_pred ccccCCccccccccCCCceEEEEeCCC-CeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEE
Q psy11539 394 VHHYNGTNVDKTIRDDQRYMYFHSMSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMF 471 (530)
Q Consensus 394 ~~~~~~~~~~~~~~~~~r~LYf~plsS-~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LY 471 (530)
++|||+-... .+++++... .+ ..+.+...+ ...+.|+++| ..|.||
T Consensus 508 -----------------g~ly~td~~~~~~I~~~~~d----G~----------~~~~l~~~~-l~~PnGlavd~~~~~LY 555 (699)
T 1n7d_A 508 -----------------GFMYWTDWGTPAKIKKGGLN----GV----------DIYSLVTEN-IQWPNGITLDLLSGRLY 555 (699)
T ss_dssp -----------------SCCEECCCSSSCCEEBCCSS----SC----------CCCEESCSS-CSSCCCEEECTTTCCEE
T ss_pred -----------------CcEEEcccCCCCeEEEEeCC----CC----------CeeEEEeCC-CCCccEEEEeccCCEEE
Confidence 6889887654 566665421 11 111222211 2478999999 679999
Q ss_pred EEccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 472 YNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 472 ft~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
+++...+.|..++.+ +. +..++......+.+|.+|+++.+ +||++...++.|
T Consensus 556 ~aD~~~~~I~~~d~d-G~----~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V 607 (699)
T 1n7d_A 556 WVDSKLHSISSIDVN-GG----NRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAI 607 (699)
T ss_dssp EEETTTTEEEEECSS-SS----CCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCE
T ss_pred EEecCCCeEEEEccC-CC----ceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeE
Confidence 999999999999998 52 34455544567899999999865 899887655443
No 43
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.98 E-value=6.1e-08 Score=93.93 Aligned_cols=197 Identities=12% Similarity=0.058 Sum_probs=125.7
Q ss_pred ceEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEE
Q psy11539 239 LISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 318 (530)
Q Consensus 239 LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~A 318 (530)
+..+.++.+|..|+||++|+.. ..|.+||++++++.+.... .......|++| .++.+
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~------------~~i~~~d~~~~~~~~~~~~------~~~~~~~i~~~-----~dg~l 100 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFE------------GNIFKINPETKEIKRPFVS------HKANPAAIKIH-----KDGRL 100 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTT------------CEEEEECTTTCCEEEEEEC------SSSSEEEEEEC-----TTSCE
T ss_pred CccccCcEECCCCCEEEEECCC------------CEEEEEeCCCCcEEEEeeC------CCCCcceEEEC-----CCCcE
Confidence 3456788999999999999853 3599999999887653322 12446778887 56789
Q ss_pred EEecCCC----CeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccc
Q psy11539 319 YVNDVFR----YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNV 394 (530)
Q Consensus 319 YItDsg~----~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~ 394 (530)
||++... .+|.+||.++++..++.... .+ + ..+.+|+++|++
T Consensus 101 ~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~--------~------~~~~~i~~d~~g----------------- 146 (333)
T 2dg1_A 101 FVCYLGDFKSTGGIFAATENGDNLQDIIEDL---ST--------A------YCIDDMVFDSKG----------------- 146 (333)
T ss_dssp EEEECTTSSSCCEEEEECTTSCSCEEEECSS---SS--------C------CCEEEEEECTTS-----------------
T ss_pred EEEeCCCCCCCceEEEEeCCCCEEEEEEccC---cc--------C------CcccceEECCCC-----------------
Confidence 9998876 79999999988766443210 00 0 134567777764
Q ss_pred cccCCccccccccCCCceEEEEeCC------CCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCC
Q psy11539 395 HHYNGTNVDKTIRDDQRYMYFHSMS------SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNG 468 (530)
Q Consensus 395 ~~~~~~~~~~~~~~~~r~LYf~pls------S~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G 468 (530)
.||+.... ...+|+++.+- . .++.+-.. ...+.+++++.+|
T Consensus 147 -----------------~l~v~~~~~~~~~~~~~l~~~~~~~---~-----------~~~~~~~~--~~~~~~i~~~~dg 193 (333)
T 2dg1_A 147 -----------------GFYFTDFRGYSTNPLGGVYYVSPDF---R-----------TVTPIIQN--ISVANGIALSTDE 193 (333)
T ss_dssp -----------------CEEEEECCCBTTBCCEEEEEECTTS---C-----------CEEEEEEE--ESSEEEEEECTTS
T ss_pred -----------------CEEEEeccccccCCCceEEEEeCCC---C-----------EEEEeecC--CCcccceEECCCC
Confidence 46666553 24677775321 0 11111111 1246788999888
Q ss_pred c-EEEEccCCCeEEEEeCCC-Cc-cccCceeEEeecCCceeecceeEEecCCcEEEEEeec
Q psy11539 469 V-MFYNLVTKHSVGCWNTKT-KV-YLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVN 526 (530)
Q Consensus 469 ~-LYft~~~~~aI~cWnt~~-~~-~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~sn 526 (530)
. ||+++...+.|.+|+.++ +. +......+... ......|+++.+|.+|++||....+
T Consensus 194 ~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~-~~~~~~~~~i~~d~~G~l~v~~~~~ 253 (333)
T 2dg1_A 194 KVLWVTETTANRLHRIALEDDGVTIQPFGATIPYY-FTGHEGPDSCCIDSDDNLYVAMYGQ 253 (333)
T ss_dssp SEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEE-CCSSSEEEEEEEBTTCCEEEEEETT
T ss_pred CEEEEEeCCCCeEEEEEecCCCcCcccccceEEEe-cCCCCCCCceEECCCCCEEEEEcCC
Confidence 5 999988888999999851 21 11000011111 1112479999999999999976544
No 44
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.97 E-value=5.8e-08 Score=93.13 Aligned_cols=190 Identities=5% Similarity=-0.062 Sum_probs=128.2
Q ss_pred CceEEEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 238 SLISVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 238 ~LvSV~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
++..+-++..|+.|+ ||++|+.. -+|..||+.++ ++++..+. .....|++| .++
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~------------~~i~~~~~~~~--~~~~~~~~------~~~~~l~~~-----~dg 80 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQ------------NRTWAWSDDGQ--LSPEMHPS------HHQNGHCLN-----KQG 80 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGG------------TEEEEEETTSC--EEEEESSC------SSEEEEEEC-----TTC
T ss_pred CCccccCCeEeCCCCEEEEEeCCC------------CEEEEEECCCC--eEEEECCC------CCcceeeEC-----CCC
Confidence 456678999999987 99999764 35999999887 66666533 345678887 567
Q ss_pred EEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccc
Q psy11539 317 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHH 396 (530)
Q Consensus 317 ~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~ 396 (530)
.+|+++.+..+|.+||.++|+.-++... ..+..+ ..+.+|++++++
T Consensus 81 ~l~v~~~~~~~i~~~d~~~g~~~~~~~~------------~~~~~~---~~~~~i~~d~~G------------------- 126 (296)
T 3e5z_A 81 HLIACSHGLRRLERQREPGGEWESIADS------------FEGKKL---NSPNDVCLAPDG------------------- 126 (296)
T ss_dssp CEEEEETTTTEEEEECSTTCCEEEEECE------------ETTEEC---CCCCCEEECTTS-------------------
T ss_pred cEEEEecCCCeEEEEcCCCCcEEEEeec------------cCCCCC---CCCCCEEECCCC-------------------
Confidence 7999999989999999988876544321 112211 135578888765
Q ss_pred cCCccccccccCCCceEEEEeC-----------------CCCeeEEEecchhcCccccCCccccccceEE-eccccCCCC
Q psy11539 397 YNGTNVDKTIRDDQRYMYFHSM-----------------SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHY-LGSRFKNTQ 458 (530)
Q Consensus 397 ~~~~~~~~~~~~~~r~LYf~pl-----------------sS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~-lG~rG~~sq 458 (530)
.||++.. .+..+|+++.. . .++. .+. ...
T Consensus 127 ---------------~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~----g-----------~~~~~~~~---~~~ 173 (296)
T 3e5z_A 127 ---------------SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD----G-----------TLSAPIRD---RVK 173 (296)
T ss_dssp ---------------CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT----S-----------CEEEEECC---CSS
T ss_pred ---------------CEEEECCccccccccccccccccCCCcEEEEECCC----C-----------CEEEeecC---CCC
Confidence 3666422 13467777542 1 1111 121 135
Q ss_pred CcceEEcCCCcEEEEccCCCeEEEEeCC-CCccccCceeEEeecCCceeecceeEEecCCcEEEEE
Q psy11539 459 ASASAINSNGVMFYNLVTKHSVGCWNTK-TKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTF 523 (530)
Q Consensus 459 s~G~aiD~~G~LYft~~~~~aI~cWnt~-~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~ 523 (530)
+.|++++.+|.+++++...+.|.+|+.+ ++.+. .+..++ . .....|+++++|.+|+|||..
T Consensus 174 ~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~-~~~~~~-~--~~~~~p~~i~~d~~G~l~v~~ 235 (296)
T 3e5z_A 174 PNGLAFLPSGNLLVSDTGDNATHRYCLNARGETE-YQGVHF-T--VEPGKTDGLRVDAGGLIWASA 235 (296)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEEEECSSSCEE-EEEEEE-C--CSSSCCCSEEEBTTSCEEEEE
T ss_pred CccEEECCCCCEEEEeCCCCeEEEEEECCCCcCc-CCCeEe-e--CCCCCCCeEEECCCCCEEEEc
Confidence 7889999999877999999999999975 13220 112233 2 245679999999999999976
No 45
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.94 E-value=1.3e-07 Score=95.84 Aligned_cols=219 Identities=16% Similarity=0.081 Sum_probs=144.9
Q ss_pred ceeeeEEe--CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeC-CCcEEEEeC
Q psy11539 182 LPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDK-CDRLWIMDT 258 (530)
Q Consensus 182 iP~GV~v~--~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~-cgRLWVLDt 258 (530)
-|.|++++ +++||++-.. . -.|..+..+... .+... ..++..+.++.+|. .++||+.|.
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~--~---~~I~r~~~~g~~----~~~~~---------~~~~~~p~glavd~~~g~ly~~d~ 135 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVT--L---DRILRANLNGSN----VEEVV---------STGLESPGGLAVDWVHDKLYWTDS 135 (349)
T ss_dssp CEEEEEEETTTTEEEEEETT--T---TEEEEEETTSCS----CEEEE---------CSSCSCCCEEEEETTTTEEEEEET
T ss_pred ceEEEEEeccccEEEEEecc--C---CceEEEecCCCC----ceEEE---------eCCCCCccEEEEecCCCeEEEEcC
Confidence 48999996 6999998522 2 267777764211 10000 13466788999995 789999999
Q ss_pred CCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCC-CeEEEEEccCCe
Q psy11539 259 GVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR-YGLIVYDFFKNT 337 (530)
Q Consensus 259 G~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~-~gLIVyDl~~g~ 337 (530)
+. -+|.++|+.... .+.+ +.. .....++|+|| ..++++|++|.+. +.|.++++....
T Consensus 136 ~~------------~~I~~~~~dG~~-~~~l-~~~----~l~~P~~iavd----p~~g~ly~td~~~~~~I~r~~~dG~~ 193 (349)
T 3v64_C 136 GT------------SRIEVANLDGAH-RKVL-LWQ----SLEKPRAIALH----PMEGTIYWTDWGNTPRIEASSMDGSG 193 (349)
T ss_dssp TT------------TEEEEEETTSCS-CEEE-ECT----TCSCEEEEEEE----TTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CC------------CeEEEEcCCCCc-eEEE-EeC----CCCCcceEEEe----cCcCeEEEeccCCCCEEEEEeCCCCC
Confidence 85 359999996543 2222 212 23456899999 3578999999998 889999987432
Q ss_pred EEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEe
Q psy11539 338 SYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHS 417 (530)
Q Consensus 338 swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~p 417 (530)
.++... ..+. ..+|||+++++ +.|||.-
T Consensus 194 -~~~~~~---------------~~~~---~PnGla~d~~~---------------------------------~~lY~aD 221 (349)
T 3v64_C 194 -RRIIAD---------------THLF---WPNGLTIDYAG---------------------------------RRMYWVD 221 (349)
T ss_dssp -CEESCC---------------SSCS---CEEEEEEETTT---------------------------------TEEEEEE
T ss_pred -cEEEEE---------------CCCC---CcceEEEeCCC---------------------------------CEEEEEE
Confidence 222110 0112 23589998865 7899999
Q ss_pred CCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccccCceeE
Q psy11539 418 MSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDI 497 (530)
Q Consensus 418 lsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~l 497 (530)
....++++++.+ ... ..+.+.. + ...+.|++++ .|.||+++...++|.++|..++. ...+
T Consensus 222 ~~~~~I~~~~~d----G~~---------~~~~~~~-~-~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~----~~~~ 281 (349)
T 3v64_C 222 AKHHVIERANLD----GSH---------RKAVISQ-G-LPHPFAITVF-EDSLYWTDWHTKSINSANKFTGK----NQEI 281 (349)
T ss_dssp TTTTEEEEEETT----SCS---------CEEEECS-S-CSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCC----SCEE
T ss_pred CCCCEEEEEeCC----CCc---------eEEEEeC-C-CCCceEEEEE-CCEEEEecCCCCeEEEEEccCCC----ccEE
Confidence 888889888742 111 0111111 1 2478999995 57899999999999999943242 3445
Q ss_pred EeecCCceeecceeEEec
Q psy11539 498 VQTSRDILNFREEGEEEE 515 (530)
Q Consensus 498 V~~d~~~L~~Pd~l~Id~ 515 (530)
|.. .+..|.|+++.+
T Consensus 282 i~~---~~~~p~gi~v~~ 296 (349)
T 3v64_C 282 IRN---KLHFPMDIHTLH 296 (349)
T ss_dssp EEC---SCSCCCCEEEEC
T ss_pred ecc---CCCCCceEEEEc
Confidence 542 477899999964
No 46
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.93 E-value=3.2e-08 Score=94.37 Aligned_cols=201 Identities=12% Similarity=0.072 Sum_probs=125.8
Q ss_pred CceEEEEEEEeCCCcEEEE-------eCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEee
Q psy11539 238 SLISVFRMSVDKCDRLWIM-------DTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVV 310 (530)
Q Consensus 238 ~LvSV~rv~ID~cgRLWVL-------DtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~ 310 (530)
+|..+.++.+|..|+|||. |++. ..|..||++++++. .+..|.. .........|++|
T Consensus 16 ~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~------------~~i~~~d~~~g~~~-~~~~~~~-~~~~~~~~~i~~~-- 79 (314)
T 1pjx_A 16 DIPGAEGPVFDKNGDFYIVAPEVEVNGKPA------------GEILRIDLKTGKKT-VICKPEV-NGYGGIPAGCQCD-- 79 (314)
T ss_dssp CCTTCEEEEECTTSCEEEEETTCEETTEEC------------CEEEEECTTTCCEE-EEECCEE-TTEECCEEEEEEC--
T ss_pred cCCCccCceECCCCCEEEEEeccccCCCCC------------CEEEEEeCCCCcEE-EEEeccc-CCCCCCCceEEEe--
Confidence 4566788999999999999 6543 35999999898874 3444211 0012345678887
Q ss_pred cCCCC-eEEEEecCCCCeEEEEEccCCeEEEE-cCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcc
Q psy11539 311 EDCDH-VFAYVNDVFRYGLIVYDFFKNTSYRL-THPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYE 388 (530)
Q Consensus 311 ~~c~~-~~AYItDsg~~gLIVyDl~~g~swRv-~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~ 388 (530)
.+ +.+||++... +|.+||.+ |+..++ .... . +..+ ..+.+|++++++
T Consensus 80 ---~~~g~l~v~~~~~-~l~~~d~~-g~~~~~~~~~~---~---------~~~~---~~~~~i~~d~~g----------- 128 (314)
T 1pjx_A 80 ---RDANQLFVADMRL-GLLVVQTD-GTFEEIAKKDS---E---------GRRM---QGCNDCAFDYEG----------- 128 (314)
T ss_dssp ---SSSSEEEEEETTT-EEEEEETT-SCEEECCSBCT---T---------SCBC---BCCCEEEECTTS-----------
T ss_pred ---cCCCcEEEEECCC-CEEEEeCC-CCEEEEEeccC---C---------Cccc---cCCcCEEECCCC-----------
Confidence 45 8999999855 99999999 766544 2110 0 0000 135577777664
Q ss_pred cccccccccCCccccccccCCCceEEEEeCCC---------------CeeEEEecchhcCccccCCccccccceEEeccc
Q psy11539 389 YYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSS---------------NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSR 453 (530)
Q Consensus 389 ~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS---------------~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~r 453 (530)
.||+..... ..+|+++.+ ... . ......
T Consensus 129 -----------------------~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----g~~-------~---~~~~~~ 171 (314)
T 1pjx_A 129 -----------------------NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD----GQM-------I---QVDTAF 171 (314)
T ss_dssp -----------------------CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT----SCE-------E---EEEEEE
T ss_pred -----------------------CEEEEecCcccccccccccccCCCCeEEEECCC----CCE-------E---EeccCC
Confidence 466665443 457777532 111 0 111111
Q ss_pred cCCCCCcceEEc----CCC-cEEEEccCCCeEEEEeCC-CCccccCceeEEeecCCce-eecceeEEecCCcEEEEEeec
Q psy11539 454 FKNTQASASAIN----SNG-VMFYNLVTKHSVGCWNTK-TKVYLPQTQDIVQTSRDIL-NFREEGEEEEEKENTCTFLVN 526 (530)
Q Consensus 454 G~~sqs~G~aiD----~~G-~LYft~~~~~aI~cWnt~-~~~~~~~n~~lV~~d~~~L-~~Pd~l~Id~dG~lYv~~~sn 526 (530)
..+.+++++ .+| .||+++...+.|.+|+.+ ++.+. +..++..-.... ..|.++.+|.+|++||....+
T Consensus 172 ---~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~--~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~ 246 (314)
T 1pjx_A 172 ---QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIE--NKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS 246 (314)
T ss_dssp ---SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEE--EEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT
T ss_pred ---CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccc--cceEEEECCCCCCCCCCceEECCCCCEEEEEcCC
Confidence 246788888 888 699999888999999964 13221 122322212222 679999999999999987544
Q ss_pred e
Q psy11539 527 K 527 (530)
Q Consensus 527 r 527 (530)
.
T Consensus 247 ~ 247 (314)
T 1pjx_A 247 S 247 (314)
T ss_dssp T
T ss_pred C
Confidence 3
No 47
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.93 E-value=3.4e-08 Score=102.40 Aligned_cols=268 Identities=10% Similarity=0.048 Sum_probs=146.4
Q ss_pred ceeeeEEe-CCeEEEEccCCCCCC-------CcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeC----
Q psy11539 182 LPLGIGIW-RSTIFLSFPKWKAGI-------PFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDK---- 249 (530)
Q Consensus 182 iP~GV~v~-~gRlFVTiPR~~~Gv-------P~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~---- 249 (530)
=|.+|++. +|++|++.--|.+|. +-.+..++.++.+..+.......-++ + ..--.+.+|.++.
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~----~-~~~f~PhGi~~~~d~dg 125 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTL----D-ISSFNPHGISTFIDDDN 125 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSC----C-GGGCCEEEEEEEECTTC
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCC----C-cCceeeeeeEEEECCCC
Confidence 47888886 799999986666553 33577777543221111111111000 1 1123678887743
Q ss_pred CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCC---
Q psy11539 250 CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRY--- 326 (530)
Q Consensus 250 cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~--- 326 (530)
..||||+|.+... ..-.|+.+|..++.+...-.+.. .....+||+++| .++-.|+++..-.
T Consensus 126 ~~~L~Vvnh~~~~--------s~ielf~~d~~~~~~~~~~~~~g---~~~~~pND~~v~-----~~G~fyvt~~~~ftd~ 189 (355)
T 3sre_A 126 TVYLLVVNHPGSS--------STVEVFKFQEEEKSLLHLKTIRH---KLLPSVNDIVAV-----GPEHFYATNDHYFIDP 189 (355)
T ss_dssp CEEEEEEECSTTC--------CEEEEEEEETTTTEEEEEEEECC---TTCSSEEEEEEE-----ETTEEEEEESCSCSSH
T ss_pred cEEEEEEECCCCC--------CeEEEEEEECCCCEEEEEecccc---CCCCCCceEEEe-----CCCCEEecCCcEeCCc
Confidence 3479999998522 12337777776654433333422 234678999999 5677788775210
Q ss_pred --eEE--EEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccc
Q psy11539 327 --GLI--VYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNV 402 (530)
Q Consensus 327 --gLI--VyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~ 402 (530)
++. ......|..+|+.. .......+| +. -.+|||+||++
T Consensus 190 ~~~~~e~~~~~~~g~vyr~d~-------~~~~~~~~~--l~---~pNGia~spDg------------------------- 232 (355)
T 3sre_A 190 YLKSWEMHLGLAWSFVTYYSP-------NDVRVVAEG--FD---FANGINISPDG------------------------- 232 (355)
T ss_dssp HHHHHHHHTTCCCEEEEEECT-------TCCEEEEEE--ES---SEEEEEECTTS-------------------------
T ss_pred ccccchhhccCCccEEEEEEC-------CeEEEeecC--Cc---ccCcceECCCC-------------------------
Confidence 000 00012333444321 111111122 11 34799999987
Q ss_pred cccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcC-CCcEEEEcc-CCCeE
Q psy11539 403 DKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINS-NGVMFYNLV-TKHSV 480 (530)
Q Consensus 403 ~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~-~G~LYft~~-~~~aI 480 (530)
++||+.-....++++.+... +..+. ....| .+ + +.++|+++|. +|+||++.. .-..|
T Consensus 233 --------~~lYvadt~~~~I~~~~~~~--~g~l~-----~~~~~-~~---~--g~PDGi~vD~e~G~lwva~~~~g~~v 291 (355)
T 3sre_A 233 --------KYVYIAELLAHKIHVYEKHA--NWTLT-----PLRVL-SF---D--TLVDNISVDPVTGDLWVGCHPNGMRI 291 (355)
T ss_dssp --------SEEEEEEGGGTEEEEEEECT--TSCEE-----EEEEE-EC---S--SEEEEEEECTTTCCEEEEEESCHHHH
T ss_pred --------CEEEEEeCCCCeEEEEEECC--CCcEe-----cCEEE-eC---C--CCCceEEEeCCCCcEEEEecCCceEE
Confidence 89999999889998887431 22221 11122 22 1 4699999998 699999653 43445
Q ss_pred EEEeCCCCcc------------ccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 481 GCWNTKTKVY------------LPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 481 ~cWnt~~~~~------------~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
.+|+++ .+- ..-....++.++.+...-.+.++-.+|.|||-.+..+++
T Consensus 292 ~~~~P~-~~~~s~v~rI~~~~~~~~~v~~v~~ddG~~l~~~T~a~~~~g~L~iGsv~~~~l 351 (355)
T 3sre_A 292 FFYDAE-NPPGSEVLRIQDILSEEPKVTVVYAENGTVLQGSTVAAVYKGKLLIGTVFHKAL 351 (355)
T ss_dssp HSCCTT-SCCCEEEEEEECTTSSSCEEEEEEEECSSSCCSEEEEEEETTEEEEEESSSCEE
T ss_pred EEECCC-CCCCCEEEEEEccCCCCcEEEEEEEcCCCEEEeeEEEEEECCEEEEEEcCCCce
Confidence 555543 100 001244455566665555566666789999977766543
No 48
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.92 E-value=1.1e-07 Score=93.36 Aligned_cols=200 Identities=7% Similarity=-0.050 Sum_probs=121.2
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
..+.++.+|..|+|||.|.+. .+|+.||..+ ++...+.++ .....|++| .++.+|
T Consensus 32 ~~pegia~~~~g~lyv~d~~~------------~~I~~~d~~g-~~~~~~~~~-------~~p~gia~~-----~dG~l~ 86 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEV------------GEIVSITPDG-NQQIHATVE-------GKVSGLAFT-----SNGDLV 86 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTT------------TEEEEECTTC-CEEEEEECS-------SEEEEEEEC-----TTSCEE
T ss_pred CCcceEEECCCCCEEEEeCCC------------CeEEEECCCC-ceEEEEeCC-------CCceeEEEc-----CCCcEE
Confidence 457889999999999999764 4599999965 566656553 246778887 456699
Q ss_pred EecCCCC--eEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccccc
Q psy11539 320 VNDVFRY--GLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHY 397 (530)
Q Consensus 320 ItDsg~~--gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~ 397 (530)
++|.+.. .|+++|..+|+..++... ++ . .+ .+|++..+.
T Consensus 87 vad~~~~~~~v~~~d~~~g~~~~~~~~---~~---~---------~~---~~g~~~~~~--------------------- 127 (306)
T 2p4o_A 87 ATGWNADSIPVVSLVKSDGTVETLLTL---PD---A---------IF---LNGITPLSD--------------------- 127 (306)
T ss_dssp EEEECTTSCEEEEEECTTSCEEEEEEC---TT---C---------SC---EEEEEESSS---------------------
T ss_pred EEeccCCcceEEEEcCCCCeEEEEEeC---CC---c---------cc---cCcccccCC---------------------
Confidence 9997644 499999888876544321 11 0 11 134554332
Q ss_pred CCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCC
Q psy11539 398 NGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTK 477 (530)
Q Consensus 398 ~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~ 477 (530)
..+|.......++|+++...-+-..... ..... .....+ ....+.|+.- ..+.||+++...
T Consensus 128 -------------~~~~v~d~~~g~i~~~d~~~~~~~v~~~-~~~~~-~~~~~~---~~~~pngis~-dg~~lyv~d~~~ 188 (306)
T 2p4o_A 128 -------------TQYLTADSYRGAIWLIDVVQPSGSIWLE-HPMLA-RSNSES---VFPAANGLKR-FGNFLYVSNTEK 188 (306)
T ss_dssp -------------SEEEEEETTTTEEEEEETTTTEEEEEEE-CGGGS-CSSTTC---CSCSEEEEEE-ETTEEEEEETTT
T ss_pred -------------CcEEEEECCCCeEEEEeCCCCcEeEEEE-CCccc-cccccC---CCCcCCCcCc-CCCEEEEEeCCC
Confidence 3567666555678888753110000000 00000 000011 1124566622 345899999999
Q ss_pred CeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeece
Q psy11539 478 HSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNK 527 (530)
Q Consensus 478 ~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr 527 (530)
+.|.+++.+ ..-...+.+++.. +.+|++|++|.+|+|||....+.
T Consensus 189 ~~I~~~~~~-~~g~~~~~~~~~~----~~~P~gi~vd~dG~l~va~~~~~ 233 (306)
T 2p4o_A 189 MLLLRIPVD-STDKPGEPEIFVE----QTNIDDFAFDVEGNLYGATHIYN 233 (306)
T ss_dssp TEEEEEEBC-TTSCBCCCEEEEE----SCCCSSEEEBTTCCEEEECBTTC
T ss_pred CEEEEEEeC-CCCCCCccEEEec----cCCCCCeEECCCCCEEEEeCCCC
Confidence 999999987 3111112333332 36899999999999999766443
No 49
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.92 E-value=1.4e-06 Score=83.80 Aligned_cols=239 Identities=10% Similarity=0.057 Sum_probs=149.7
Q ss_pred ceeeeEEe-CC-eEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCc-EEEEeC
Q psy11539 182 LPLGIGIW-RS-TIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIMDT 258 (530)
Q Consensus 182 iP~GV~v~-~g-RlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgR-LWVLDt 258 (530)
-|.++.+. +| ++|++-.. . .+|..++..... .+..++.-.-. ......-..+.++.++.+|+ ||+.+.
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~--~---~~v~~~d~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~~ 160 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTV--N---SAVTAIDAKTGE---VKGRLVLDDRK-RTEEVRPLQPRELVADDATNTVYISGI 160 (353)
T ss_dssp CCCSEEEETTTTEEEEEETT--T---TEEEEEETTTCC---EEEEEESCCCC-CCSSCCCCEEEEEEEETTTTEEEEEEE
T ss_pred CcceEEECCCCCEEEEEecC--C---CEEEEEeCCCCe---eEEEEecCCCc-cccccCCCCCceEEECCCCCEEEEEec
Confidence 47888887 44 58888543 2 378888765322 22222210000 00112234578899998765 888885
Q ss_pred CCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeE
Q psy11539 259 GVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 259 G~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~s 338 (530)
|. ..+|.+||++++++++++... +.....++++ .++.++|+++. ...|.+||..+++.
T Consensus 161 ~~-----------~~~i~~~d~~~~~~~~~~~~~------~~~~~~~~~s----~dg~~l~~~~~-~~~i~~~d~~~~~~ 218 (353)
T 3vgz_A 161 GK-----------ESVIWVVDGGNIKLKTAIQNT------GKMSTGLALD----SEGKRLYTTNA-DGELITIDTADNKI 218 (353)
T ss_dssp SS-----------SCEEEEEETTTTEEEEEECCC------CTTCCCCEEE----TTTTEEEEECT-TSEEEEEETTTTEE
T ss_pred CC-----------CceEEEEcCCCCceEEEecCC------CCccceEEEC----CCCCEEEEEcC-CCeEEEEECCCCeE
Confidence 53 245999999999999877632 2235677887 36779999987 56899999999876
Q ss_pred EEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeC
Q psy11539 339 YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSM 418 (530)
Q Consensus 339 wRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pl 418 (530)
.+..... . .|. ...+.+|+++|++ +.||....
T Consensus 219 ~~~~~~~---~--------~~~----~~~~~~~~~s~dg---------------------------------~~l~~~~~ 250 (353)
T 3vgz_A 219 LSRKKLL---D--------DGK----EHFFINISLDTAR---------------------------------QRAFITDS 250 (353)
T ss_dssp EEEEECC---C--------SSS----CCCEEEEEEETTT---------------------------------TEEEEEES
T ss_pred EEEEEcC---C--------CCC----CcccceEEECCCC---------------------------------CEEEEEeC
Confidence 5432110 0 000 0023468888876 78888887
Q ss_pred CCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCc-EEEEccCCCeEEEEeCCCCccccCceeE
Q psy11539 419 SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGV-MFYNLVTKHSVGCWNTKTKVYLPQTQDI 497 (530)
Q Consensus 419 sS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~-LYft~~~~~aI~cWnt~~~~~~~~n~~l 497 (530)
.+..++.++.+-. + .++.+. .+ .+.+++++.+|. ||++....+.|.+||..++.. ...
T Consensus 251 ~~~~v~~~d~~~~----------~---~~~~~~-~~---~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~----~~~ 309 (353)
T 3vgz_A 251 KAAEVLVVDTRNG----------N---ILAKVA-AP---ESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV----VKT 309 (353)
T ss_dssp SSSEEEEEETTTC----------C---EEEEEE-CS---SCCCEEEETTTTEEEEEETTTTEEEEEETTTTEE----EEE
T ss_pred CCCEEEEEECCCC----------c---EEEEEE-cC---CCceEEECCCCCEEEEEECCCCeEEEEECCCCeE----EEE
Confidence 7778888864221 1 111111 11 346789998876 999998889999999973322 112
Q ss_pred EeecCCceeecceeEEecCCc-EEEEEe
Q psy11539 498 VQTSRDILNFREEGEEEEEKE-NTCTFL 524 (530)
Q Consensus 498 V~~d~~~L~~Pd~l~Id~dG~-lYv~~~ 524 (530)
+. .-..|.+++++.+|. ||+..-
T Consensus 310 ~~----~~~~~~~~~~s~dg~~l~v~~~ 333 (353)
T 3vgz_A 310 FD----TPTHPNSLALSADGKTLYVSVK 333 (353)
T ss_dssp EE----CCSEEEEEEECTTSCEEEEEEE
T ss_pred Ee----cCCCCCeEEEcCCCCEEEEEEc
Confidence 21 123789999999986 777543
No 50
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.89 E-value=1.3e-07 Score=104.31 Aligned_cols=193 Identities=10% Similarity=0.044 Sum_probs=136.0
Q ss_pred CceEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 238 SLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 238 ~LvSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
++..+++|.+|. .++||+.|.+. -+|..+++....+...+. .. ......|+||. .++
T Consensus 35 ~~~~~~~l~~d~~~~~lywtD~~~------------~~I~r~~~~g~~~~~v~~--~g----~~~P~GlAvD~----~~~ 92 (628)
T 4a0p_A 35 GVKEASALDFDVTDNRIYWTDISL------------KTISRAFMNGSALEHVVE--FG----LDYPEGMAVDW----LGK 92 (628)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTT------------TEEEEEETTSCSCEEEEC--SS----CSCCCEEEEET----TTT
T ss_pred CCCceEEEEEECCCCEEEEEECCC------------CeEEEEECCCCCcEEEEe--CC----CCCcceEEEEe----CCC
Confidence 477899999996 78999999974 359999997654432221 11 13467899993 468
Q ss_pred EEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccc
Q psy11539 317 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHH 396 (530)
Q Consensus 317 ~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~ 396 (530)
.+|++|.+...|.|++++... .+++-. . .+ ....|||++|..
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~-~~~l~~-------------~--~l---~~P~~iavdp~~------------------- 134 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQH-RQVLVW-------------K--DL---DSPRALALDPAE------------------- 134 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTT-CEEEEC-------------S--SC---CCEEEEEEETTT-------------------
T ss_pred EEEEEECCCCEEEEEecCCCc-EEEEEe-------------C--CC---CCcccEEEccCC-------------------
Confidence 999999999999999997542 332210 0 01 123589998864
Q ss_pred cCCccccccccCCCceEEEEeCC-CCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEEEEc
Q psy11539 397 YNGTNVDKTIRDDQRYMYFHSMS-SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMFYNL 474 (530)
Q Consensus 397 ~~~~~~~~~~~~~~r~LYf~pls-S~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LYft~ 474 (530)
+.|||+-.. ..+++++.. +.+ ..+.+.+. ...+.|+++| .++.||+++
T Consensus 135 --------------G~lY~tD~g~~~~I~r~~~----dG~----------~~~~l~~~--~~~P~GlalD~~~~~LY~aD 184 (628)
T 4a0p_A 135 --------------GFMYWTEWGGKPKIDRAAM----DGS----------ERTTLVPN--VGRANGLTIDYAKRRLYWTD 184 (628)
T ss_dssp --------------TEEEEEECSSSCEEEEEET----TSC----------SCEEEECS--CSSEEEEEEETTTTEEEEEE
T ss_pred --------------CeEEEeCCCCCCEEEEEeC----CCC----------ceEEEECC--CCCcceEEEccccCEEEEEE
Confidence 689999864 567777753 111 12223332 2479999999 579999999
Q ss_pred cCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 475 VTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 475 ~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
...+.|.+.|.+ +.. ..++.. .+..|.||+++. ++||++...++.|
T Consensus 185 ~~~~~I~~~d~d-G~~----~~v~~~---~l~~P~glav~~-~~ly~tD~~~~~I 230 (628)
T 4a0p_A 185 LDTNLIESSNML-GLN----REVIAD---DLPHPFGLTQYQ-DYIYWTDWSRRSI 230 (628)
T ss_dssp TTTTEEEEEETT-SCS----CEEEEE---CCSCEEEEEEET-TEEEEEETTTTEE
T ss_pred CCCCEEEEEcCC-CCc----eEEeec---cCCCceEEEEEC-CEEEEecCCCCEE
Confidence 999999999998 632 334442 478899999986 7999998766544
No 51
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.89 E-value=1.6e-07 Score=91.23 Aligned_cols=194 Identities=10% Similarity=0.037 Sum_probs=124.1
Q ss_pred CceEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 238 SLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 238 ~LvSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
++.-.-++..|+ .++||++|... .+|+.||++++++ +.+.++. ....|++| .++
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~------------~~i~~~d~~~~~~-~~~~~~~-------~~~~i~~~-----~dG 65 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPA------------KKVCRWDSFTKQV-QRVTMDA-------PVSSVALR-----QSG 65 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTT------------TEEEEEETTTCCE-EEEECSS-------CEEEEEEB-----TTS
T ss_pred CCccccCCeEECCCCEEEEEECCC------------CEEEEEECCCCcE-EEEeCCC-------ceEEEEEC-----CCC
Confidence 344556777777 68899999875 4599999998876 4565542 35667777 445
Q ss_pred EEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccc
Q psy11539 317 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHH 396 (530)
Q Consensus 317 ~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~ 396 (530)
.+|++. ..+|.+||.++++...+.... .+ ..+. .+++|++++++
T Consensus 66 ~l~v~~--~~~l~~~d~~~g~~~~~~~~~--~~----------~~~~---~~~di~~d~dG------------------- 109 (297)
T 3g4e_A 66 GYVATI--GTKFCALNWKEQSAVVLATVD--ND----------KKNN---RFNDGKVDPAG------------------- 109 (297)
T ss_dssp SEEEEE--TTEEEEEETTTTEEEEEEECC--TT----------CSSE---EEEEEEECTTS-------------------
T ss_pred CEEEEE--CCeEEEEECCCCcEEEEEecC--CC----------CCCC---CCCCEEECCCC-------------------
Confidence 588886 469999999998765544221 00 0001 23467777765
Q ss_pred cCCccccccccCCCceEEEEeCC-----------CCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc
Q psy11539 397 YNGTNVDKTIRDDQRYMYFHSMS-----------SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN 465 (530)
Q Consensus 397 ~~~~~~~~~~~~~~r~LYf~pls-----------S~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD 465 (530)
+ ||+..+. ...+|+++.. ... ....... ..+.|++++
T Consensus 110 --------------~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~----g~~----------~~~~~~~---~~pngi~~s 157 (297)
T 3g4e_A 110 --------------R-YFAGTMAEETAPAVLERHQGALYSLFPD----HHV----------KKYFDQV---DISNGLDWS 157 (297)
T ss_dssp --------------C-EEEEEEECCSBTTBCCTTCEEEEEECTT----SCE----------EEEEEEE---SBEEEEEEC
T ss_pred --------------C-EEEecCCcccccccccCCCcEEEEEECC----CCE----------EEEeecc---ccccceEEc
Confidence 3 7776643 2367777532 111 0111111 247799999
Q ss_pred CCC-cEEEEccCCCeEEEEeC--CCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeec
Q psy11539 466 SNG-VMFYNLVTKHSVGCWNT--KTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVN 526 (530)
Q Consensus 466 ~~G-~LYft~~~~~aI~cWnt--~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~sn 526 (530)
.+| .||+++...+.|.+|+. .++.+. +.+++..-......|+++++|.+|+|||....+
T Consensus 158 pdg~~lyv~~~~~~~i~~~~~d~~~G~~~--~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~ 219 (297)
T 3g4e_A 158 LDHKIFYYIDSLSYSVDAFDYDLQTGQIS--NRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG 219 (297)
T ss_dssp TTSCEEEEEEGGGTEEEEEEECTTTCCEE--EEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT
T ss_pred CCCCEEEEecCCCCcEEEEeccCCCCccc--CcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC
Confidence 877 59999999999999984 324332 223343322234689999999999999976543
No 52
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.89 E-value=3.6e-07 Score=100.41 Aligned_cols=196 Identities=10% Similarity=0.040 Sum_probs=136.3
Q ss_pred CCceEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCC
Q psy11539 237 NSLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDH 315 (530)
Q Consensus 237 ~~LvSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~ 315 (530)
.+|.+++++..|. .++|++.|.+. .+|..+++........+ .. ......+|+||. .+
T Consensus 346 ~~l~~~~~ld~d~~~~~ly~sD~~~------------~~I~r~~~~g~~~~~v~--~~----~~~~p~GlAvD~----~~ 403 (619)
T 3s94_A 346 EDIRHAIAIDYDPVEGYIYWTDDEV------------RAIRRSFIDGSGSQFVV--TA----QIAHPDGIAVDW----VA 403 (619)
T ss_dssp SCCSSEEEEEEETTTTEEEEEETTT------------TEEEEEETTSCSCEEEE--CS----SCSCCCEEEEET----TT
T ss_pred cccCccEEEEEEcCCCeEEEEeCCC------------CeEEEEEcCCCccEEEE--EC----CCCCcCceEEec----cc
Confidence 4578899999997 78999999864 35899999764332211 11 124567899993 46
Q ss_pred eEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccc
Q psy11539 316 VFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVH 395 (530)
Q Consensus 316 ~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~ 395 (530)
+.+|++|.+...|.|.++... ..+++-. .+ + ....+||+.|..
T Consensus 404 ~~lY~tD~~~~~I~v~~~~G~-~~~~l~~-------------~~--l---~~P~~iavdp~~------------------ 446 (619)
T 3s94_A 404 RNLYWTDTGTDRIEVTRLNGT-MRKILIS-------------ED--L---EEPRAIVLDPMV------------------ 446 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSC-SCEEEEC-------------TT--C---CSEEEEEEETTT------------------
T ss_pred CcEEEEeCCCCcEEEEeCCCC-eEEEEEE-------------CC--C---CCeeeEEEEcCC------------------
Confidence 899999999999999999854 3333311 00 1 134588998864
Q ss_pred ccCCccccccccCCCceEEEEeCCC-CeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEEEE
Q psy11539 396 HYNGTNVDKTIRDDQRYMYFHSMSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMFYN 473 (530)
Q Consensus 396 ~~~~~~~~~~~~~~~r~LYf~plsS-~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LYft 473 (530)
..|||+-... .++++... +.+ ..+.+... ....+.|+++| .+|.||++
T Consensus 447 ---------------G~ly~tD~g~~~~I~r~~~----dG~----------~~~~l~~~-~l~~P~GlalD~~~~~LY~a 496 (619)
T 3s94_A 447 ---------------GYMYWTDWGEIPKIERAAL----DGS----------DRVVLVNT-SLGWPNGLALDYDEGKIYWG 496 (619)
T ss_dssp ---------------TEEEEEECSSSCEEEEEET----TSC----------SCEEEECS-SCSCEEEEEEETTTTEEEEE
T ss_pred ---------------CcEEEecCCCCCEEEEEcc----CCC----------ccEEEEeC-CCCCCeeeEEcccCCEEEEE
Confidence 6899998654 56776653 111 11122221 12478999999 68999999
Q ss_pred ccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 474 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 474 ~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
+...+.|.+.+.+ +.. ..++.. ..+..|.||+++.+ +||++...++.|
T Consensus 497 D~~~~~I~~~~~d-G~~----~~~~~~--~~l~~P~glav~~~-~ly~tD~~~~~I 544 (619)
T 3s94_A 497 DAKTDKIEVMNTD-GTG----RRVLVE--DKIPHIFGFTLLGD-YVYWTDWQRRSI 544 (619)
T ss_dssp ETTTTEEEEEESS-SCC----CEEEEE--CCCCSSCCEEEETT-EEEEECTTSSCE
T ss_pred ECCCCEEEEEecC-CCc----eEEEec--cCCCCcEEEEEECC-EEEEeecCCCeE
Confidence 9999999999998 643 334443 46889999999854 999988766643
No 53
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.87 E-value=1.1e-07 Score=94.32 Aligned_cols=233 Identities=12% Similarity=-0.016 Sum_probs=143.3
Q ss_pred CCceeeeEEe--CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEe
Q psy11539 180 NNLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMD 257 (530)
Q Consensus 180 n~iP~GV~v~--~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLD 257 (530)
..++.|+.+. ++++|++--. . .+|..++... + .++.+.. . ..+..+..|.+|++||..
T Consensus 48 ~~~~egp~~~~~~~~l~~~d~~--~---~~i~~~d~~~-~---~~~~~~~-----~------~~v~~i~~~~dg~l~v~~ 107 (326)
T 2ghs_A 48 MLLGEGPTFDPASGTAWWFNIL--E---RELHELHLAS-G---RKTVHAL-----P------FMGSALAKISDSKQLIAS 107 (326)
T ss_dssp CSBEEEEEEETTTTEEEEEEGG--G---TEEEEEETTT-T---EEEEEEC-----S------SCEEEEEEEETTEEEEEE
T ss_pred CCCCcCCeEeCCCCEEEEEECC--C---CEEEEEECCC-C---cEEEEEC-----C------CcceEEEEeCCCeEEEEE
Confidence 3467788876 3778777432 2 2677777542 1 1221110 0 146677888999999986
Q ss_pred CCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC------CCeEEEE
Q psy11539 258 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF------RYGLIVY 331 (530)
Q Consensus 258 tG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg------~~gLIVy 331 (530)
.. .|++||++++++......+.. .....++++++| .++.+||++.+ ..+|.++
T Consensus 108 ~~--------------gl~~~d~~~g~~~~~~~~~~~--~~~~~~~~i~~d-----~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 108 DD--------------GLFLRDTATGVLTLHAELESD--LPGNRSNDGRMH-----PSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp TT--------------EEEEEETTTCCEEEEECSSTT--CTTEEEEEEEEC-----TTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CC--------------CEEEEECCCCcEEEEeeCCCC--CCCCCCCCEEEC-----CCCCEEEEeCCCcCCCCceEEEEE
Confidence 21 299999999987543333221 223567889998 45678998863 3578888
Q ss_pred EccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCc
Q psy11539 332 DFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQR 411 (530)
Q Consensus 332 Dl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r 411 (530)
| +++..++.. + + ...+||++++++ +
T Consensus 167 ~--~g~~~~~~~---------------~--~---~~~~~i~~s~dg---------------------------------~ 191 (326)
T 2ghs_A 167 A--KGKVTKLFA---------------D--I---SIPNSICFSPDG---------------------------------T 191 (326)
T ss_dssp E--TTEEEEEEE---------------E--E---SSEEEEEECTTS---------------------------------C
T ss_pred e--CCcEEEeeC---------------C--C---cccCCeEEcCCC---------------------------------C
Confidence 8 464433211 0 0 123578888876 7
Q ss_pred eEEEEeCCCCeeEEEecchhcCc-cccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCcc
Q psy11539 412 YMYFHSMSSNRHYYVSTTDLRNS-SRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVY 490 (530)
Q Consensus 412 ~LYf~plsS~~lY~V~T~~Lrn~-s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~ 490 (530)
.||+.......+++++.+. ... .+. . ...+..+.. ....++|+++|++|+||++....+.|.+||++ +..
T Consensus 192 ~lyv~~~~~~~I~~~d~~~-~~Gl~~~----~-~~~~~~~~~--~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~ 262 (326)
T 2ghs_A 192 TGYFVDTKVNRLMRVPLDA-RTGLPTG----K-AEVFIDSTG--IKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNH 262 (326)
T ss_dssp EEEEEETTTCEEEEEEBCT-TTCCBSS----C-CEEEEECTT--SSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCE
T ss_pred EEEEEECCCCEEEEEEccc-ccCCccc----C-ceEEEECCC--CCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCE
Confidence 8999877777888887431 011 110 0 111222221 12357899999999999999888899999997 533
Q ss_pred ccCceeEEeecCCceeecceeEEe-cC-CcEEEEEe
Q psy11539 491 LPQTQDIVQTSRDILNFREEGEEE-EE-KENTCTFL 524 (530)
Q Consensus 491 ~~~n~~lV~~d~~~L~~Pd~l~Id-~d-G~lYv~~~ 524 (530)
...+.. . ...|.+++++ .+ +.|||+..
T Consensus 263 ----~~~i~~-~--~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 263 ----IARYEV-P--GKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp ----EEEEEC-S--CSBEEEEEEESTTSCEEEEEEB
T ss_pred ----EEEEEC-C--CCCcEEEEEecCCCCEEEEEec
Confidence 223322 2 2357888887 55 46777543
No 54
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.85 E-value=6.2e-07 Score=92.78 Aligned_cols=229 Identities=13% Similarity=0.065 Sum_probs=144.6
Q ss_pred cCCCceeeeEEe--CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeC-CCcEE
Q psy11539 178 PENNLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDK-CDRLW 254 (530)
Q Consensus 178 p~n~iP~GV~v~--~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~-cgRLW 254 (530)
+.-.-|.|++++ +++||++-.. . -.|..+..+......... .. -...+..+.++.+|. .++||
T Consensus 109 ~~~~~~~~l~~d~~~~~lywsD~~--~---~~I~~~~~~g~~~~~~~~-----~~----~~~~~~~p~glavD~~~~~lY 174 (400)
T 3p5b_L 109 PNLRNVVALDTEVASNRIYWSDLS--Q---RMICSTQLDRAHGVSSYD-----TV----ISRDIQAPDGLAVDWIHSNIY 174 (400)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETT--T---TEEEEEEC------CCCE-----EE----ECSSCSCEEEEEEETTTTEEE
T ss_pred cccCcceEEeeeeccCceEEEecC--C---CeEEEEEcccCCCCCcce-----EE----EeCCCCCcccEEEEecCCceE
Confidence 344568999997 6999999533 1 256666653211000000 00 013577899999997 78999
Q ss_pred EEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCC-CeEEEEEc
Q psy11539 255 IMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR-YGLIVYDF 333 (530)
Q Consensus 255 VLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~-~gLIVyDl 333 (530)
+.|.+. -+|.++|+........+. . ......+|+|| ..++++|+||.+. +.|.++++
T Consensus 175 ~~d~~~------------~~I~~~~~~g~~~~~l~~--~----~~~~P~~iavd----p~~g~ly~td~~~~~~I~~~~~ 232 (400)
T 3p5b_L 175 WTDSVL------------GTVSVADTKGVKRKTLFR--E----NGSKPRAIVVD----PVHGFMYWTDWGTPAKIKKGGL 232 (400)
T ss_dssp EEETTT------------TEEEEECTTTCSEEEEEE--C----SSCCEEEEEEE----TTTTEEEEEECSSSCCEEEEET
T ss_pred EEECCC------------CeEEEEeCCCCceEEEEe--C----CCCCcceEEEe----cccCeEEEEeCCCCCEEEEEeC
Confidence 999986 359999997654332221 1 23446899999 3578999999874 77888888
Q ss_pred cCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceE
Q psy11539 334 FKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYM 413 (530)
Q Consensus 334 ~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~L 413 (530)
.......+.. . .+. ..+|||+++++ +.|
T Consensus 233 dG~~~~~~~~--------------~--~l~---~P~glavd~~~---------------------------------~~l 260 (400)
T 3p5b_L 233 NGVDIYSLVT--------------E--NIQ---WPNGITLDLLS---------------------------------GRL 260 (400)
T ss_dssp TSCSCEEEEC--------------S--SCS---CEEEEEEETTT---------------------------------TEE
T ss_pred CCCccEEEEE--------------C--CCC---ceEEEEEEeCC---------------------------------CEE
Confidence 7442222111 0 112 23589998775 789
Q ss_pred EEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccccC
Q psy11539 414 YFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQ 493 (530)
Q Consensus 414 Yf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~ 493 (530)
||.-....++++++.+ ... ...+ +...+....+.|+++++ +.||+++...++|.++|..++.
T Consensus 261 Y~aD~~~~~I~~~d~d----G~~-------~~~~--~~~~~~l~~P~gl~v~~-~~lywtd~~~~~V~~~~~~~G~---- 322 (400)
T 3p5b_L 261 YWVDSKLHSISSIDVN----GGN-------RKTI--LEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGS---- 322 (400)
T ss_dssp EEEETTTTEEEEEETT----SCC-------CEEE--EECSSTTSSEEEEEEET-TEEEEEESSSCSEEEEESSSCC----
T ss_pred EEEECCCCEEEEEeCC----CCc-------cEEE--EeCCCCCCCCEEEEEeC-CEEEEecCCCCeEEEEEcCCCC----
Confidence 9998888888888742 111 1111 11112235788999965 5799999999999999954242
Q ss_pred ceeEEeecCCceeecceeEEec
Q psy11539 494 TQDIVQTSRDILNFREEGEEEE 515 (530)
Q Consensus 494 n~~lV~~d~~~L~~Pd~l~Id~ 515 (530)
...+|.. .+..|.+|++.+
T Consensus 323 ~~~~i~~---~~~~p~~i~v~~ 341 (400)
T 3p5b_L 323 DVNLLAE---NLLSPEDMVLFH 341 (400)
T ss_dssp CCEEEEC---SCSCEEEEEEES
T ss_pred ceEEEec---CCCCCceEEEEe
Confidence 3345542 456688888854
No 55
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.85 E-value=2.7e-07 Score=91.55 Aligned_cols=210 Identities=12% Similarity=0.055 Sum_probs=139.8
Q ss_pred eEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEE
Q psy11539 240 ISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 318 (530)
Q Consensus 240 vSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~A 318 (530)
..+-++..|+ .++||++.-.. ++|+.+|+. +++++++.+... .-+-.|+++ .++..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~------------~~I~~ld~~-g~v~~~i~l~g~-----~D~EGIa~~-----~~g~~ 83 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKP------------AAIVEMTTN-GDLIRTIPLDFV-----KDLETIEYI-----GDNQF 83 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETT------------EEEEEEETT-CCEEEEEECSSC-----SSEEEEEEC-----STTEE
T ss_pred cCcceeEEeCCCCEEEEEECCC------------CeEEEEeCC-CCEEEEEecCCC-----CChHHeEEe-----CCCEE
Confidence 3578889996 57899875542 679999997 999999998431 335678887 55677
Q ss_pred EEecCCCCeEEEEEccCCeE-EEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccccc
Q psy11539 319 YVNDVFRYGLIVYDFFKNTS-YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHY 397 (530)
Q Consensus 319 YItDsg~~gLIVyDl~~g~s-wRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~ 397 (530)
||+|-+.+.|++|+...... |.+....+. +. ...-..|.-|||.+|.+
T Consensus 84 ~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~---------~~--~~~~N~g~EGLA~d~~~-------------------- 132 (255)
T 3qqz_A 84 VISDERDYAIYVISLTPNSEVKILKKIKIP---------LQ--ESPTNCGFEGLAYSRQD-------------------- 132 (255)
T ss_dssp EEEETTTTEEEEEEECTTCCEEEEEEEECC---------CS--SCCCSSCCEEEEEETTT--------------------
T ss_pred EEEECCCCcEEEEEcCCCCeeeeeeeeccc---------cc--cccccCCcceEEEeCCC--------------------
Confidence 89999999999999877653 433221110 00 00112366799998875
Q ss_pred CCccccccccCCCceEEEEeCCCC-eeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEEEEcc
Q psy11539 398 NGTNVDKTIRDDQRYMYFHSMSSN-RHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMFYNLV 475 (530)
Q Consensus 398 ~~~~~~~~~~~~~r~LYf~plsS~-~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LYft~~ 475 (530)
.+||...=.+. .+|.++ ..+....+. +...-...+.. .....+|+++| .+|.||+-.-
T Consensus 133 -------------~~L~va~E~~p~~i~~~~-g~~~~~~l~-----i~~~~~~~~~~-~~~d~S~l~~dp~tg~lliLS~ 192 (255)
T 3qqz_A 133 -------------HTFWFFKEKNPIEVYKVN-GLLSSNELH-----ISKDKALQRQF-TLDDVSGAEFNQQKNTLLVLSH 192 (255)
T ss_dssp -------------TEEEEEEESSSEEEEEEE-STTCSSCCE-----EEECHHHHHTC-CSSCCCEEEEETTTTEEEEEET
T ss_pred -------------CEEEEEECcCCceEEEEc-ccccCCcee-----eecchhhcccc-ccCCceeEEEcCCCCeEEEEEC
Confidence 67888877777 788887 333222111 00000001111 12357999999 8899999999
Q ss_pred CCCeEEEEeCCCCccccCceeEEeecC------CceeecceeEEecCCcEEEEEeecee
Q psy11539 476 TKHSVGCWNTKTKVYLPQTQDIVQTSR------DILNFREEGEEEEEKENTCTFLVNKY 528 (530)
Q Consensus 476 ~~~aI~cWnt~~~~~~~~n~~lV~~d~------~~L~~Pd~l~Id~dG~lYv~~~snr~ 528 (530)
+...|..+|.+ +... ..+.... .++.=|.||++|.+|+|||+.=-|.+
T Consensus 193 ~s~~L~~~d~~-g~~~----~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~ 246 (255)
T 3qqz_A 193 ESRALQEVTLV-GEVI----GEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRF 246 (255)
T ss_dssp TTTEEEEECTT-CCEE----EEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEE
T ss_pred CCCeEEEEcCC-CCEE----EEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceE
Confidence 99999999998 6532 1222222 23567999999999999998766654
No 56
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.84 E-value=1.7e-07 Score=96.31 Aligned_cols=152 Identities=8% Similarity=0.023 Sum_probs=107.3
Q ss_pred ccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCccc
Q psy11539 300 SLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSG 379 (530)
Q Consensus 300 S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~ 379 (530)
.....|++| ..++.+|++|.....|.++++..+..-.+... | .....|||+++.+
T Consensus 116 ~~~~gl~~d----~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~--------------~-----~~~p~glavd~~~-- 170 (386)
T 3v65_B 116 ENAIALDFH----HRRELVFWSDVTLDRILRANLNGSNVEEVVST--------------G-----LESPGGLAVDWVH-- 170 (386)
T ss_dssp SCEEEEEEE----TTTTEEEEEETTTTEEEEEETTSCCEEEEECS--------------S-----CSCCCCEEEETTT--
T ss_pred CccEEEEEe----cCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC--------------C-----CCCccEEEEEeCC--
Confidence 445677777 35789999999999999999987643333211 0 0134588888764
Q ss_pred ccccCCCcccccccccccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCC
Q psy11539 380 YKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQA 459 (530)
Q Consensus 380 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs 459 (530)
+.|||.-....++++++.. .. ..+.+...+ ..++
T Consensus 171 -------------------------------g~lY~~d~~~~~I~~~~~d----g~----------~~~~l~~~~-l~~P 204 (386)
T 3v65_B 171 -------------------------------DKLYWTDSGTSRIEVANLD----GA----------HRKVLLWQS-LEKP 204 (386)
T ss_dssp -------------------------------TEEEEEETTTTEEEECBTT----SC----------SCEEEECSS-CSCE
T ss_pred -------------------------------CeEEEEcCCCCeEEEEeCC----CC----------ceEEeecCC-CCCC
Confidence 7899999988888776532 11 111121111 2478
Q ss_pred cceEEc-CCCcEEEEccCC-CeEEEEeCCCCccccCceeEEeecCCceeecceeEEe-cCCcEEEEEeeceee
Q psy11539 460 SASAIN-SNGVMFYNLVTK-HSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEE-EEKENTCTFLVNKYV 529 (530)
Q Consensus 460 ~G~aiD-~~G~LYft~~~~-~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id-~dG~lYv~~~snr~~ 529 (530)
.|+++| ..|.||+++... .+|.+++.+ +.. ..++.. ..+.||.||++| .++.||++...++.|
T Consensus 205 ~giavdp~~g~ly~td~~~~~~I~r~~~d-G~~----~~~~~~--~~~~~PnGlavd~~~~~lY~aD~~~~~I 270 (386)
T 3v65_B 205 RAIALHPMEGTIYWTDWGNTPRIEASSMD-GSG----RRIIAD--THLFWPNGLTIDYAGRRMYWVDAKHHVI 270 (386)
T ss_dssp EEEEEETTTTEEEEEECSSSCEEEEEETT-SCS----CEEEEC--SSCSCEEEEEEEGGGTEEEEEETTTTEE
T ss_pred cEEEEEcCCCeEEEeccCCCCEEEEEeCC-CCC----cEEEEE--CCCCCeeeEEEeCCCCEEEEEECCCCEE
Confidence 999999 789999999988 999999998 632 234432 468999999999 688999998766554
No 57
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.83 E-value=2.5e-07 Score=101.76 Aligned_cols=197 Identities=9% Similarity=-0.000 Sum_probs=128.0
Q ss_pred CCceEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCC
Q psy11539 237 NSLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDH 315 (530)
Q Consensus 237 ~~LvSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~ 315 (530)
..+..+.++.+|. .++||+.|.+. -+|..+++........ .+... .....+|+|| -.+
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~------------~~I~r~~~~g~~~~~~-v~~~~----~~~P~GlAvD----~~~ 95 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSE------------EAIKRTEFNKTESVQN-VVVSG----LLSPDGLACD----WLG 95 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTT------------TEEEEEEC-----CEE-EECSS----CSCEEEEEEE----TTT
T ss_pred cCCCceEEEEEEeCCCEEEEEECCC------------CeEEEEEccCCCceEE-EEeCC----CCCcCeEEEE----ecC
Confidence 3477899999996 78999999874 3599999966432111 22121 2456899999 247
Q ss_pred eEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccc
Q psy11539 316 VFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVH 395 (530)
Q Consensus 316 ~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~ 395 (530)
+.+|++|.....|.|+|++.. ..+++-. ..+ ....|||++|.+
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~-~~~~l~~---------------~~l---~~P~~Iavdp~~------------------ 138 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGS-LRKVLFW---------------QEL---DQPRAIALDPSS------------------ 138 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSC-SCEEEEC---------------SSC---SCCCCEEEETTT------------------
T ss_pred CEEEEEeCCCCEEEEEECCCC-CEEEEEe---------------CCC---CCCceEEEecCC------------------
Confidence 899999999999999999854 3333210 001 134689998875
Q ss_pred ccCCccccccccCCCceEEEEeCC-CCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEEEE
Q psy11539 396 HYNGTNVDKTIRDDQRYMYFHSMS-SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMFYN 473 (530)
Q Consensus 396 ~~~~~~~~~~~~~~~r~LYf~pls-S~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LYft 473 (530)
+.|||+-.. ..++++... +.+ ..+.+... ....+.|+++| .+|.||++
T Consensus 139 ---------------g~ly~tD~g~~~~I~r~~~----dG~----------~~~~l~~~-~~~~P~Glald~~~~~LY~a 188 (619)
T 3s94_A 139 ---------------GFMYWTDWGEVPKIERAGM----DGS----------SRFIIINS-EIYWPNGLTLDYEEQKLYWA 188 (619)
T ss_dssp ---------------TEEEEEECSSSCEEEEEET----TSC----------SCEEEECS-SCSSEEEEEEETTTTEEEEE
T ss_pred ---------------CeEEEeccCCCCEEEEEEC----CCC----------ceEEEEeC-CCCCCcEEEEEccCCEEEEE
Confidence 689999865 346666643 111 11222211 12468999999 68999999
Q ss_pred ccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 474 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 474 ~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
+...+.|.+.|.+ +.. ...+.. ..+..|.||+++++ +||++...|+.|
T Consensus 189 D~~~~~I~~~~~d-G~~----~~~~~~--~~~~~P~gi~~~~~-~ly~td~~~~~V 236 (619)
T 3s94_A 189 DAKLNFIHKSNLD-GTN----RQAVVK--GSLPHPFALTLFED-ILYWTDWSTHSI 236 (619)
T ss_dssp ETTTCCEEEESSS-CCE----EC-----------CCCEEESSS-EEEEECTTTCSE
T ss_pred eCCCCeEEEecCC-CCc----cEEEEe--CCCCCceEEEEeCC-EEEEecCCCCEE
Confidence 9999999999998 643 223332 35899999999866 999987666543
No 58
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.80 E-value=5.9e-07 Score=90.43 Aligned_cols=220 Identities=12% Similarity=0.067 Sum_probs=142.1
Q ss_pred eeeeEEe--CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeC-CCcEEEEeCC
Q psy11539 183 PLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDK-CDRLWIMDTG 259 (530)
Q Consensus 183 P~GV~v~--~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~-cgRLWVLDtG 259 (530)
|.++++. +++||++-.. --.|..+..+... .. .+. -..++.++.++.+|. .++||+.|.+
T Consensus 37 ~~~ld~d~~~~~lyw~D~~-----~~~I~r~~~~g~~-~~------~~~-----~~~~l~~p~glavd~~~g~ly~~d~~ 99 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVS-----EEAIKRTEFNKTE-SV------QNV-----VVSGLLSPDGLACDWLGEKLYWTDSE 99 (318)
T ss_dssp EEEEEEEGGGTEEEEEETT-----TTEEEEEETTSSS-CC------CEE-----EEECCSCCCEEEEETTTTEEEEEETT
T ss_pred cEEEEEEeCCCEEEEEECC-----CCcEEEEEccCCC-ce------EEE-----EcCCCCCccEEEEEcCCCeEEEEECC
Confidence 5677775 6999999532 1367777754211 00 000 013567889999995 8899999998
Q ss_pred CCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC-CCeEEEEEccCCeE
Q psy11539 260 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIVYDFFKNTS 338 (530)
Q Consensus 260 ~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg-~~gLIVyDl~~g~s 338 (530)
. .+|.++|+.... .+.+ +.. .....++|+||. .++++|++|.+ .+.|.++++.....
T Consensus 100 ~------------~~I~~~~~dG~~-~~~l-~~~----~~~~P~giavdp----~~g~ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 100 T------------NRIEVSNLDGSL-RKVL-FWQ----ELDQPRAIALDP----SSGFMYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp T------------TEEEEEETTSCS-CEEE-ECS----SCSSEEEEEEEG----GGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred C------------CEEEEEECCCCc-EEEE-EeC----CCCCccEEEEeC----CCCEEEEEecCCCCEEEEEEcCCCCe
Confidence 5 359999996543 2222 111 234568999993 46899999976 57888888874322
Q ss_pred EEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeC
Q psy11539 339 YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSM 418 (530)
Q Consensus 339 wRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pl 418 (530)
..+.. . .+.+ .+|||+++++ +.|||.-.
T Consensus 158 ~~~~~--------------~--~l~~---Pnglavd~~~---------------------------------~~lY~aD~ 185 (318)
T 3sov_A 158 FIIIN--------------S--EIYW---PNGLTLDYEE---------------------------------QKLYWADA 185 (318)
T ss_dssp EEEEC--------------S--SCSC---EEEEEEETTT---------------------------------TEEEEEET
T ss_pred EEEEE--------------C--CCCC---ccEEEEeccC---------------------------------CEEEEEEC
Confidence 11111 0 1222 3589998865 78999998
Q ss_pred CCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccccCceeEE
Q psy11539 419 SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIV 498 (530)
Q Consensus 419 sS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~lV 498 (530)
...++++++.+ ... .+.+.+ +....+.|+++|. +.||+++...++|.+++..++.. ...|
T Consensus 186 ~~~~I~~~d~d----G~~----------~~~~~~-~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~----~~~i 245 (318)
T 3sov_A 186 KLNFIHKSNLD----GTN----------RQAVVK-GSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEG----LREI 245 (318)
T ss_dssp TTTEEEEEETT----SCS----------CEEEEC-SCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS----CEEE
T ss_pred CCCEEEEEcCC----CCc----------eEEEec-CCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCc----eEEE
Confidence 88889988742 111 111221 1235799999985 57999999999999999853432 3344
Q ss_pred eecCCceeecceeEEecC
Q psy11539 499 QTSRDILNFREEGEEEEE 516 (530)
Q Consensus 499 ~~d~~~L~~Pd~l~Id~d 516 (530)
.. .+..|.++++.+.
T Consensus 246 ~~---~~~~P~~i~v~~~ 260 (318)
T 3sov_A 246 HS---DIFSPMDIHAFSQ 260 (318)
T ss_dssp EC---CCSSCCCEEEECG
T ss_pred eC---CCCCCcEEEEecc
Confidence 42 3567889988543
No 59
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.79 E-value=1.3e-07 Score=105.15 Aligned_cols=227 Identities=12% Similarity=0.055 Sum_probs=141.1
Q ss_pred CCCceeeeEEe--CCeEEEEccCCCCCCCcEEEEEECCCCC-CCCccCCCCCCCcCCCCCCCCceEEEEEEEe-CCCcEE
Q psy11539 179 ENNLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPS-ESPILLPYPNWSYFDDSNCNSLISVFRMSVD-KCDRLW 254 (530)
Q Consensus 179 ~n~iP~GV~v~--~gRlFVTiPR~~~GvP~TLa~V~~~~~~-~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID-~cgRLW 254 (530)
.-.-|.||++. .++||++-.. . ..|.++...... .+....-. ..++..+.+|++| ..++||
T Consensus 404 ~~~~p~gla~d~~~~~Ly~sD~~--~---~~I~~~~~~g~~~~~~~~~~i----------~~~~~~P~glavD~~~g~LY 468 (699)
T 1n7d_A 404 NLRNVVALDTEVASNRIYWSDLS--Q---RMICSTQLDRAHGVSSYDTVI----------SRDIQAPDGLAVDWIHSNIY 468 (699)
T ss_dssp CCTTCCCCEEETTTTEEEECCTT--T---TSBEEEESCCCCC-CCCCCBC----------CSCC--CCCEECCCSSSBCE
T ss_pred cCcceEEEccccccCeEEEEecC--C---CeEEEEecCCCCCCcceEEEE----------eCCCCCcceEEEEeeCCcEE
Confidence 34458899996 6899998532 2 256667654210 00000000 1346778899999 578999
Q ss_pred EEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCC-CeEEEEEc
Q psy11539 255 IMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR-YGLIVYDF 333 (530)
Q Consensus 255 VLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~-~gLIVyDl 333 (530)
|.|.+.. +|.++|+....+. + .+.. ......+|+||. .++++|+||.+. +.|.++++
T Consensus 469 ~tD~~~~------------~I~v~d~dg~~~~-~-l~~~----~~~~P~giavDp----~~g~ly~td~~~~~~I~~~~~ 526 (699)
T 1n7d_A 469 WTDSVLG------------TVSVADTKGVKRK-T-LFRE----QGSKPRAIVVDP----VHGFMYWTDWGTPAKIKKGGL 526 (699)
T ss_dssp ECCTTTS------------CEEEEBSSSCCEE-E-ECCC----SSCCCCCEECCS----SSSCCEECCCSSSCCEEBCCS
T ss_pred EEeccCC------------eEEEEecCCCceE-E-EEeC----CCCCcceEEEcc----CCCcEEEcccCCCCeEEEEeC
Confidence 9998753 3899999654433 2 2222 124468899983 478999999875 67888877
Q ss_pred cCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceE
Q psy11539 334 FKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYM 413 (530)
Q Consensus 334 ~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~L 413 (530)
... ..+++. . ..+.+ .+|||+++++ +.|
T Consensus 527 dG~-~~~~l~--------------~-~~l~~---PnGlavd~~~---------------------------------~~L 554 (699)
T 1n7d_A 527 NGV-DIYSLV--------------T-ENIQW---PNGITLDLLS---------------------------------GRL 554 (699)
T ss_dssp SSC-CCCEES--------------C-SSCSS---CCCEEECTTT---------------------------------CCE
T ss_pred CCC-CeeEEE--------------e-CCCCC---ccEEEEeccC---------------------------------CEE
Confidence 632 111110 0 11222 3588998875 789
Q ss_pred EEEeCCCCeeEEEecchhcCccccCCccccccceEEec-cccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCcccc
Q psy11539 414 YFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLG-SRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLP 492 (530)
Q Consensus 414 Yf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG-~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~ 492 (530)
||.-....++++++..- . ..+.+. ..+....+.|+++|.+ .||+++...+.|.++|..++.
T Consensus 555 Y~aD~~~~~I~~~d~dG----~----------~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~--- 616 (699)
T 1n7d_A 555 YWVDSKLHSISSIDVNG----G----------NRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGS--- 616 (699)
T ss_dssp EEEETTTTEEEEECSSS----S----------CCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEE---
T ss_pred EEEecCCCeEEEEccCC----C----------ceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCC---
Confidence 99998888898887421 1 111111 1122357899999976 799999999999999976232
Q ss_pred CceeEEeecCCceeecceeEEecC
Q psy11539 493 QTQDIVQTSRDILNFREEGEEEEE 516 (530)
Q Consensus 493 ~n~~lV~~d~~~L~~Pd~l~Id~d 516 (530)
...+|. ..+..|.+|+|.+.
T Consensus 617 -~~~~i~---~~~~~P~~i~v~~~ 636 (699)
T 1n7d_A 617 -DVNLLA---ENLLSPEDMVLFHQ 636 (699)
T ss_dssp -EEECCC---TTCSSCCCCCBCSS
T ss_pred -ceEEee---cCCCCCcEEEEeCc
Confidence 222332 23667888887644
No 60
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.79 E-value=3e-07 Score=91.60 Aligned_cols=221 Identities=9% Similarity=0.050 Sum_probs=125.2
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCccccc---CccccceEEEeecCCCCe
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFE---GSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~---~S~lndIvVDv~~~c~~~ 316 (530)
..+.+|.++..||++|....... +..+|..+| ++++. .+|...... ......|++| .++
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~--------~~~~l~~~~--~g~~~---~~p~~~~~~~~~~~~p~gv~~d-----~~g 78 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQ--------PEMQVAELT--QDGLI---PFPPQSGNAIITFDTVLGIKSD-----GNG 78 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGC--------CSCSEEEEE--TTEEE---ESCCCCSSCCCCCSCEEEEEEC-----SSS
T ss_pred CCcceEEECCCCCEEEEeCCCCC--------CceEEEEEC--CCCee---cCCCcccCcccceeEeeEEEEc-----CCC
Confidence 36889999999999999753211 015688998 66643 565422111 2345688888 457
Q ss_pred EEEEecCC-----CCeEEEEEccCCeEEE-EcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccc
Q psy11539 317 FAYVNDVF-----RYGLIVYDFFKNTSYR-LTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYY 390 (530)
Q Consensus 317 ~AYItDsg-----~~gLIVyDl~~g~swR-v~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y 390 (530)
.+|++|.+ .+.|++||+++|+..+ +..+ +.... . ...+.+|++++++
T Consensus 79 ~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~----~~~~~----~------~~~~~~v~vd~~~------------- 131 (343)
T 2qe8_A 79 IVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLP----PPITL----S------NSFVNDLAVDLIH------------- 131 (343)
T ss_dssp EEEEEECHHHHTSCCEEEEEETTTTEEEEEEECC----TTTSC----T------TCCCCEEEEETTT-------------
T ss_pred cEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECC----hhhcc----c------ccccceEEEecCC-------------
Confidence 89999988 6899999999997443 2211 10000 0 0134577877653
Q ss_pred cccccccCCccccccccCCCceEEEEeC---CCCeeEEEecch------hcCc-cccCCcccc---ccceEEeccccC--
Q psy11539 391 HYNVHHYNGTNVDKTIRDDQRYMYFHSM---SSNRHYYVSTTD------LRNS-SRYVNSSDI---DEYFHYLGSRFK-- 455 (530)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~r~LYf~pl---sS~~lY~V~T~~------Lrn~-s~~~~~~~~---~~~v~~lG~rG~-- 455 (530)
+.+|++.. ....++.++..- +... ......... ...+......|.
T Consensus 132 --------------------g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 191 (343)
T 2qe8_A 132 --------------------NFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVI 191 (343)
T ss_dssp --------------------TEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEE
T ss_pred --------------------CEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCcee
Confidence 46666655 344555555321 1000 000000000 000110001010
Q ss_pred --CCCCcceEEcCCC-cEEEEccCCCeEEEEeCCC---Ccccc----CceeEEeecCCceeecceeEEecCCcEEEEEee
Q psy11539 456 --NTQASASAINSNG-VMFYNLVTKHSVGCWNTKT---KVYLP----QTQDIVQTSRDILNFREEGEEEEEKENTCTFLV 525 (530)
Q Consensus 456 --~sqs~G~aiD~~G-~LYft~~~~~aI~cWnt~~---~~~~~----~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~s 525 (530)
...+.|++++.+| .||+++...+.|+++++.. +.... ..+..+.. ...|+|+++|.+|+||+....
T Consensus 192 ~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~----~g~pdgia~d~~G~l~va~~~ 267 (343)
T 2qe8_A 192 RPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSE----KPICDGISIDKDHNIYVGDLA 267 (343)
T ss_dssp CCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEE----CCSCSCEEECTTCCEEEEEGG
T ss_pred ceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEeccc----CCCCceEEECCCCCEEEEccC
Confidence 0135789999887 6999999888999998630 11100 00112211 237999999999999998766
Q ss_pred ceee
Q psy11539 526 NKYV 529 (530)
Q Consensus 526 nr~~ 529 (530)
+..|
T Consensus 268 ~~~V 271 (343)
T 2qe8_A 268 HSAI 271 (343)
T ss_dssp GTEE
T ss_pred CCeE
Confidence 5443
No 61
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.79 E-value=1.4e-06 Score=98.87 Aligned_cols=227 Identities=11% Similarity=0.018 Sum_probs=143.1
Q ss_pred CCCceeeeEEe--CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCC-CcEEE
Q psy11539 179 ENNLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKC-DRLWI 255 (530)
Q Consensus 179 ~n~iP~GV~v~--~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~c-gRLWV 255 (530)
.-..|.||++. +++||++-.. . -.|.++.............. -...|.++.+|++|.- ++||+
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~--~---~~I~~~~l~g~~~~~~~~~v---------i~~~l~~P~GLAvD~~~~~LY~ 487 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLS--Q---RMICSTQLDRAHGVSSYDTV---------ISRDIQAPDGLAVDWIHSNIYW 487 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETT--T---TEEEEEEC--------CEEE---------ECSSCSCCCEEEEETTTTEEEE
T ss_pred CCCceEEEeecccCCeeEEeecc--c---eeEEEEeccCCCCCcceeEE---------EecCCCCcceeeeeecCCcEEE
Confidence 34467899996 6999999643 2 25666665421100000000 0135778999999964 58999
Q ss_pred EeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCC-CeEEEEEcc
Q psy11539 256 MDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR-YGLIVYDFF 334 (530)
Q Consensus 256 LDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~-~gLIVyDl~ 334 (530)
.|.+. -+|.++|+... ..+++.- . ......+|+||. .++++|+||.+. +.|.++++.
T Consensus 488 tD~~~------------~~I~v~~ldG~-~~~~l~~-~----~l~~P~gIaVDp----~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 488 TDSVL------------GTVSVADTKGV-KRKTLFR-E----NGSKPRAIVVDP----VHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp EETTT------------TEEEEEETTSS-SEEEEEE-C----TTCCEEEEEEET----TTTEEEEEECSSSCEEEEEETT
T ss_pred EecCC------------CeEEEEeCCCC-eEEEEEe-C----CCCCcceEEEec----CCCCEEEecCCCCCeEEEEecC
Confidence 99986 35999999654 3333321 1 224478999993 568999999886 788888887
Q ss_pred CCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEE
Q psy11539 335 KNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMY 414 (530)
Q Consensus 335 ~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LY 414 (530)
.. ..+++-. ..+. ..+||||++.. +.||
T Consensus 546 G~-~~~~lv~---------------~~l~---~P~GLavD~~~---------------------------------~~LY 573 (791)
T 3m0c_C 546 GV-DIYSLVT---------------ENIQ---WPNGITLDLLS---------------------------------GRLY 573 (791)
T ss_dssp SC-CEEEEEC---------------SSCS---CEEEEEEETTT---------------------------------TEEE
T ss_pred CC-ceEEEEe---------------CCCC---CceEEEEecCC---------------------------------CeEE
Confidence 44 3322210 0112 23588998765 7899
Q ss_pred EEeCCCCeeEEEecchhcCccccCCccccccceEEec-cccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccccC
Q psy11539 415 FHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLG-SRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQ 493 (530)
Q Consensus 415 f~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG-~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~ 493 (530)
|.-....++++++. +.. ..+.+. ..+....+.|++++. +.||+++...++|...|..++ .
T Consensus 574 waD~~~~~I~~~d~----dG~----------~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG----~ 634 (791)
T 3m0c_C 574 WVDSKLHSISSIDV----NGG----------NRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTG----S 634 (791)
T ss_dssp EEETTTTEEEEEET----TSC----------SCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTC----C
T ss_pred EEeCCCCcEEEEec----CCC----------ceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCC----c
Confidence 99888888888764 111 111121 112234677888854 589999999999999986523 2
Q ss_pred ceeEEeecCCceeecceeEEec
Q psy11539 494 TQDIVQTSRDILNFREEGEEEE 515 (530)
Q Consensus 494 n~~lV~~d~~~L~~Pd~l~Id~ 515 (530)
+..+|. ..+..|.+|+|.+
T Consensus 635 ~~~~l~---~~l~~P~~i~v~h 653 (791)
T 3m0c_C 635 DVNLLA---ENLLSPEDMVLFH 653 (791)
T ss_dssp CCEEEE---CSCSCCCCEEEES
T ss_pred ceEEee---cCCCCceeEeeec
Confidence 344554 2577899999865
No 62
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.76 E-value=1.4e-06 Score=87.06 Aligned_cols=191 Identities=9% Similarity=0.011 Sum_probs=127.8
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.++++.+|++++|||..... +.-+|.++|++|+++++++.++.. .+-..++++ +..+|+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~----------~~s~v~~iD~~tg~v~~~i~l~~~-----~fgeGi~~~------g~~lyv 80 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLY----------GRSSVRQVALQTGKVENIHKMDDS-----YFGEGLTLL------NEKLYQ 80 (266)
T ss_dssp CEEEEEECSTTEEEEEECST----------TTCEEEEEETTTCCEEEEEECCTT-----CCEEEEEEE------TTEEEE
T ss_pred CcccEEEeCCCeEEEECCCC----------CCCEEEEEECCCCCEEEEEecCCC-----cceEEEEEe------CCEEEE
Confidence 35888999889999975421 124599999999999999998653 233467776 469999
Q ss_pred ecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCc
Q psy11539 321 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGT 400 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~ 400 (530)
++-....+.|||.++.+.-+ .|.+. - --|+.|++++
T Consensus 81 ~t~~~~~v~viD~~t~~v~~-------------~i~~g-----~---~~g~glt~Dg----------------------- 116 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSNIK-------------NFTHQ-----M---KDGWGLATDG----------------------- 116 (266)
T ss_dssp EETTCSEEEEEETTTTEEEE-------------EEECC-----S---SSCCEEEECS-----------------------
T ss_pred EEecCCEEEEEECCCCcEEE-------------EEECC-----C---CCeEEEEECC-----------------------
Confidence 99999999999999885432 12111 0 1245566554
Q ss_pred cccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccC-CCCCcceEEcCCCcEEEEccCCCe
Q psy11539 401 NVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFK-NTQASASAINSNGVMFYNLVTKHS 479 (530)
Q Consensus 401 ~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~-~sqs~G~aiD~~G~LYft~~~~~a 479 (530)
++||.+- .|.+++.++++-++... . ..+|.+|. ....-++++. +|.||.+....+.
T Consensus 117 ----------~~l~vs~-gs~~l~viD~~t~~v~~----------~-I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~ 173 (266)
T 2iwa_A 117 ----------KILYGSD-GTSILYEIDPHTFKLIK----------K-HNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC 173 (266)
T ss_dssp ----------SSEEEEC-SSSEEEEECTTTCCEEE----------E-EECEETTEECCCEEEEEEE-TTEEEEEETTSSE
T ss_pred ----------CEEEEEC-CCCeEEEEECCCCcEEE----------E-EEECCCCcccccceeEEEE-CCEEEEecCCCCe
Confidence 7899877 57789999875543221 1 12343321 1234566776 7899999988999
Q ss_pred EEEEeCCCCccccCceeEEeec----------CCceeecceeEEecCC-cEEEEE
Q psy11539 480 VGCWNTKTKVYLPQTQDIVQTS----------RDILNFREEGEEEEEK-ENTCTF 523 (530)
Q Consensus 480 I~cWnt~~~~~~~~n~~lV~~d----------~~~L~~Pd~l~Id~dG-~lYv~~ 523 (530)
|...|+.++.. .+.|... .....-|.||+++.+| .+||+.
T Consensus 174 V~vID~~tg~V----~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 174 IARISAKDGTL----LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp EEEEETTTCCE----EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCcE----EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 99999984432 1222211 1123467899999876 677765
No 63
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.75 E-value=5.7e-07 Score=99.11 Aligned_cols=199 Identities=11% Similarity=0.026 Sum_probs=126.6
Q ss_pred ceEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCccc-ccCccccceEEEeecCCCCe
Q psy11539 239 LISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQV-FEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 239 LvSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~-~~~S~lndIvVDv~~~c~~~ 316 (530)
+.+++++..|. .++|++.|.+. -+|..+++....... +....... .......+|+||. ..+
T Consensus 339 ~~~~~~ld~d~~~~~iy~sD~~~------------~~I~r~~~~g~~~~~-v~~~~~~~~~~~~~p~glAvD~----~~~ 401 (628)
T 4a0p_A 339 LRNVRAIDYDPLDKQLYWIDSRQ------------NMIRKAQEDGSQGFT-VVVSSVPSQNLEIQPYDLSIDI----YSR 401 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTT------------TEEEEEETTSCSCEE-EEC--------CCCEEEEEEET----TTT
T ss_pred cCCceEEEEecCCCeEEEEecCc------------ceEEEEEcCCCCceE-EEEcccccccccCCcceEEeec----cCC
Confidence 44566666665 46677777653 236666664322211 11100000 0123467899993 468
Q ss_pred EEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccc
Q psy11539 317 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHH 396 (530)
Q Consensus 317 ~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~ 396 (530)
.+|++|++...|.|+++. |+..+++.. .+ .+...|||+.|..
T Consensus 402 nLY~td~~~~~I~v~~~~-G~~~~~l~~-------------~~-----l~~Pr~iavdp~~------------------- 443 (628)
T 4a0p_A 402 YIYWTCEATNVINVTRLD-GRSVGVVLK-------------GE-----QDRPRAVVVNPEK------------------- 443 (628)
T ss_dssp EEEEEETTTTEEEEEETT-SCEEEEEEE-------------CT-----TCCEEEEEEETTT-------------------
T ss_pred eEEEEcCCCCEEEEEECC-CCeEEEEEe-------------CC-----CCceeeEEEecCC-------------------
Confidence 999999999999999996 555554421 00 0123489998864
Q ss_pred cCCccccccccCCCceEEEEeCCCC--eeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEEEE
Q psy11539 397 YNGTNVDKTIRDDQRYMYFHSMSSN--RHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMFYN 473 (530)
Q Consensus 397 ~~~~~~~~~~~~~~r~LYf~plsS~--~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LYft 473 (530)
+.|||+-.... ++++... +.+ ..+.+.+.+ ...+.|+++| .++.||++
T Consensus 444 --------------g~ly~tD~g~~~~~I~r~~~----dG~----------~~~~l~~~~-l~~P~gla~D~~~~~LYw~ 494 (628)
T 4a0p_A 444 --------------GYMYFTNLQERSPKIERAAL----DGT----------EREVLFFSG-LSKPIALALDSRLGKLFWA 494 (628)
T ss_dssp --------------TEEEEEEEETTEEEEEEEET----TSC----------SCEEEECSS-CSCEEEEEEETTTTEEEEE
T ss_pred --------------CeEEEeecCCCCCeEEEEeC----CCC----------CcEEEEecc-CCCccEEEEeCCCCEEEEE
Confidence 68999876554 5666642 111 122222211 2468999999 57999999
Q ss_pred ccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 474 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 474 ~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
+...+.|.+.+.+ +.. ..++.. ..+..|.||+++. |+||++...++.|
T Consensus 495 D~~~~~I~~~~~d-G~~----r~~~~~--~~~~~P~glav~~-~~ly~tD~~~~~i 542 (628)
T 4a0p_A 495 DSDLRRIESSDLS-GAN----RIVLED--SNILQPVGLTVFE-NWLYWIDKQQQMI 542 (628)
T ss_dssp ETTTTEEEEEETT-SCS----CEEEEC--SSCSCEEEEEEET-TEEEEEETTTTEE
T ss_pred eCCCCEEEEEeCC-CCc----eEEEEc--CCCCCcEEEEEEC-CEEEEEECCCCeE
Confidence 9999999999998 632 334443 4688999999986 8999998777654
No 64
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.55 E-value=2.9e-06 Score=82.58 Aligned_cols=191 Identities=6% Similarity=-0.005 Sum_probs=119.9
Q ss_pred CCceEEEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCC
Q psy11539 237 NSLISVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDH 315 (530)
Q Consensus 237 ~~LvSV~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~ 315 (530)
.++....++..|+.|+ |+++|+.. -+|..||+ ++++ +.+..+. ...+.+++| .+
T Consensus 42 ~~~~~~egp~~~~~g~~l~~~d~~~------------~~i~~~~~-~g~~-~~~~~~~------~~~~gl~~d-----~d 96 (305)
T 3dr2_A 42 DQATWSEGPAWWEAQRTLVWSDLVG------------RRVLGWRE-DGTV-DVLLDAT------AFTNGNAVD-----AQ 96 (305)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEETTT------------TEEEEEET-TSCE-EEEEESC------SCEEEEEEC-----TT
T ss_pred cCCcCccCCeEeCCCCEEEEEECCC------------CEEEEEeC-CCCE-EEEeCCC------CccceeeEC-----CC
Confidence 3455667888898887 88889764 34999998 5653 4444432 346788888 56
Q ss_pred eEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccc
Q psy11539 316 VFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVH 395 (530)
Q Consensus 316 ~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~ 395 (530)
+.+|+++.+..+|.+||.. |+...+... ..+..+. .+..|++++++
T Consensus 97 G~l~v~~~~~~~v~~~~~~-g~~~~~~~~------------~~~~~~~---~~~~i~~d~dG------------------ 142 (305)
T 3dr2_A 97 QRLVHCEHGRRAITRSDAD-GQAHLLVGR------------YAGKRLN---SPNDLIVARDG------------------ 142 (305)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEECE------------ETTEECS---CCCCEEECTTS------------------
T ss_pred CCEEEEECCCCEEEEECCC-CCEEEEEec------------cCCCccC---CCCCEEECCCC------------------
Confidence 7799999998999999987 654433211 1222221 34567777764
Q ss_pred ccCCccccccccCCCceEEEEe-----C------------CCCeeEEEecchhcCccccCCccccccceEEeccccCCCC
Q psy11539 396 HYNGTNVDKTIRDDQRYMYFHS-----M------------SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQ 458 (530)
Q Consensus 396 ~~~~~~~~~~~~~~~r~LYf~p-----l------------sS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sq 458 (530)
.|||+- + ....+|+++.+- .. ++.+-. ...
T Consensus 143 ----------------~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~---g~-----------~~~~~~---~~~ 189 (305)
T 3dr2_A 143 ----------------AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG---SP-----------LQRMAD---LDH 189 (305)
T ss_dssp ----------------CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS---CC-----------CEEEEE---ESS
T ss_pred ----------------CEEEeCcCCCccccccccccccccCCCeEEEEcCCC---Cc-----------EEEEec---CCC
Confidence 366631 1 124577775310 11 111111 125
Q ss_pred CcceEEcCCCc-EEEEccCC-----CeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEE
Q psy11539 459 ASASAINSNGV-MFYNLVTK-----HSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTF 523 (530)
Q Consensus 459 s~G~aiD~~G~-LYft~~~~-----~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~ 523 (530)
+.|++++.+|. ||+++... +.|.+|+.+.+.+ .+..++... ....|+++++|.+|+|||..
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l--~~~~~~~~~--~~~~pdgi~~d~~G~lwv~~ 256 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGAL--HDRRHFASV--PDGLPDGFCVDRGGWLWSSS 256 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEE--EEEEEEECC--SSSCCCSEEECTTSCEEECC
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCc--cCCeEEEEC--CCCCCCeEEECCCCCEEEec
Confidence 67899998886 99998763 7899999762221 122333321 23469999999999988854
No 65
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.55 E-value=7.8e-06 Score=78.38 Aligned_cols=221 Identities=13% Similarity=0.079 Sum_probs=136.4
Q ss_pred CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCc-EEEEeCCCCCcccCcc
Q psy11539 190 RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIMDTGVTNILSSIQ 268 (530)
Q Consensus 190 ~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgR-LWVLDtG~~~~~~~~~ 268 (530)
.+++|++-.. . -+|..++..... .+.-.+ .+...+ .+.++++|+ ||+.+.+.
T Consensus 9 ~~~~~v~~~~--~---~~v~~~d~~~~~---~~~~~~----------~~~~~~-~~~~s~dg~~l~~~~~~~-------- 61 (331)
T 3u4y_A 9 SNFGIVVEQH--L---RRISFFSTDTLE---ILNQIT----------LGYDFV-DTAITSDCSNVVVTSDFC-------- 61 (331)
T ss_dssp CCEEEEEEGG--G---TEEEEEETTTCC---EEEEEE----------CCCCEE-EEEECSSSCEEEEEESTT--------
T ss_pred CCEEEEEecC--C---CeEEEEeCcccc---eeeeEE----------ccCCcc-eEEEcCCCCEEEEEeCCC--------
Confidence 5788988633 2 378888764322 111111 113445 889999886 99998864
Q ss_pred ccCCCEEEEEECCCCcE-EEEEECCCcccccCccccc-eEEEeecCCCCeEEEEecCCCC--eEEEEEccCCeEEEEcCC
Q psy11539 269 QLCPPKIMVFDLKTNTL-IRKYILPTAQVFEGSLFSN-IVTEVVEDCDHVFAYVNDVFRY--GLIVYDFFKNTSYRLTHP 344 (530)
Q Consensus 269 ~~c~PKLvvfDL~Td~l-i~~y~~P~~v~~~~S~lnd-IvVDv~~~c~~~~AYItDsg~~--gLIVyDl~~g~swRv~h~ 344 (530)
-+|.+||++++++ .+.+.... .... ++++ .++.++|+++.... .|.|||+.+++.-+....
T Consensus 62 ----~~i~~~d~~~~~~~~~~~~~~~-------~~~~~~~~s----~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 126 (331)
T 3u4y_A 62 ----QTLVQIETQLEPPKVVAIQEGQ-------SSMADVDIT----PDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI 126 (331)
T ss_dssp ----CEEEEEECSSSSCEEEEEEECS-------SCCCCEEEC----TTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC
T ss_pred ----CeEEEEECCCCceeEEecccCC-------CCccceEEC----CCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC
Confidence 2699999999998 66555432 2344 7776 35778886555444 899999999876543211
Q ss_pred CCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeCCCCe--
Q psy11539 345 YMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNR-- 422 (530)
Q Consensus 345 sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~-- 422 (530)
..+..+++++|++ ++||+....+..
T Consensus 127 --------------------~~~~~~~~~spdg---------------------------------~~l~~~~~~~~~~i 153 (331)
T 3u4y_A 127 --------------------PYDAVGIAISPNG---------------------------------NGLILIDRSSANTV 153 (331)
T ss_dssp --------------------CTTEEEEEECTTS---------------------------------SCEEEEEETTTTEE
T ss_pred --------------------CCCccceEECCCC---------------------------------CEEEEEecCCCceE
Confidence 1123478888876 678887766554
Q ss_pred -eEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCc-EEEEccCCCeEEEEeCCCCccccCceeEEee
Q psy11539 423 -HYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGV-MFYNLVTKHSVGCWNTKTKVYLPQTQDIVQT 500 (530)
Q Consensus 423 -lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~-LYft~~~~~aI~cWnt~~~~~~~~n~~lV~~ 500 (530)
+|.++. +.... +.. .+.+ ..| ..+.+++++.+|. ||++....+.|..||..++... .....+..
T Consensus 154 ~~~~~~~----~g~~~----~~~--~~~~-~~~--~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~-~~~~~~~~ 219 (331)
T 3u4y_A 154 RRFKIDA----DGVLF----DTG--QEFI-SGG--TRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI-TLLNAVGT 219 (331)
T ss_dssp EEEEECT----TCCEE----EEE--EEEE-CSS--SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC-EEEEEEEC
T ss_pred EEEEECC----CCcEe----ecC--Cccc-cCC--CCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc-ceeeeccC
Confidence 444432 11110 000 1122 112 3478899998887 9999988899999999733320 00222221
Q ss_pred cCCceeecceeEEecCCc-EEEEE
Q psy11539 501 SRDILNFREEGEEEEEKE-NTCTF 523 (530)
Q Consensus 501 d~~~L~~Pd~l~Id~dG~-lYv~~ 523 (530)
-..|.+++++.+|. ||+..
T Consensus 220 ----~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 220 ----NNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp ----SSCCCCEEECTTSSEEEEEC
T ss_pred ----CCCCceEEECCCCCEEEEEE
Confidence 25678899988887 66654
No 66
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.52 E-value=1.3e-05 Score=79.38 Aligned_cols=191 Identities=9% Similarity=0.029 Sum_probs=118.8
Q ss_pred ceEEEEEEEeCC-CcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeE
Q psy11539 239 LISVFRMSVDKC-DRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 317 (530)
Q Consensus 239 LvSV~rv~ID~c-gRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~ 317 (530)
+....++..|+. ++||++|+.. .+|..||++++++ +.+.++. ....|+++ .++.
T Consensus 48 ~~~~egp~~~~~~~~l~~~d~~~------------~~i~~~d~~~~~~-~~~~~~~-------~v~~i~~~-----~dg~ 102 (326)
T 2ghs_A 48 MLLGEGPTFDPASGTAWWFNILE------------RELHELHLASGRK-TVHALPF-------MGSALAKI-----SDSK 102 (326)
T ss_dssp CSBEEEEEEETTTTEEEEEEGGG------------TEEEEEETTTTEE-EEEECSS-------CEEEEEEE-----ETTE
T ss_pred CCCCcCCeEeCCCCEEEEEECCC------------CEEEEEECCCCcE-EEEECCC-------cceEEEEe-----CCCe
Confidence 344567788874 7899999763 3699999988765 4455542 34567776 3466
Q ss_pred EEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccccc
Q psy11539 318 AYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHY 397 (530)
Q Consensus 318 AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~ 397 (530)
+||+. ..+|.+||.++++.-++.... . .. .+ ..+.++++++++
T Consensus 103 l~v~~--~~gl~~~d~~~g~~~~~~~~~---~-~~-----~~------~~~~~i~~d~~G-------------------- 145 (326)
T 2ghs_A 103 QLIAS--DDGLFLRDTATGVLTLHAELE---S-DL-----PG------NRSNDGRMHPSG-------------------- 145 (326)
T ss_dssp EEEEE--TTEEEEEETTTCCEEEEECSS---T-TC-----TT------EEEEEEEECTTS--------------------
T ss_pred EEEEE--CCCEEEEECCCCcEEEEeeCC---C-CC-----CC------CCCCCEEECCCC--------------------
Confidence 77776 357999999998765543210 0 00 00 023467777764
Q ss_pred CCccccccccCCCceEEEEeCC------CCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCC-cE
Q psy11539 398 NGTNVDKTIRDDQRYMYFHSMS------SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNG-VM 470 (530)
Q Consensus 398 ~~~~~~~~~~~~~r~LYf~pls------S~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G-~L 470 (530)
.||+..+. ...+|++++ ... . .+ .... ..+.|++++.+| .|
T Consensus 146 --------------~l~v~~~~~~~~~~~~~l~~~~~-----g~~-------~-~~--~~~~---~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 146 --------------ALWIGTMGRKAETGAGSIYHVAK-----GKV-------T-KL--FADI---SIPNSICFSPDGTTG 193 (326)
T ss_dssp --------------CEEEEEEETTCCTTCEEEEEEET-----TEE-------E-EE--EEEE---SSEEEEEECTTSCEE
T ss_pred --------------CEEEEeCCCcCCCCceEEEEEeC-----CcE-------E-Ee--eCCC---cccCCeEEcCCCCEE
Confidence 36766542 246787761 111 0 01 1111 235688999887 59
Q ss_pred EEEccCCCeEEEEeCC--CC-ccccCceeEEeecCCceeecceeEEecCCcEEEEEee
Q psy11539 471 FYNLVTKHSVGCWNTK--TK-VYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLV 525 (530)
Q Consensus 471 Yft~~~~~aI~cWnt~--~~-~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~s 525 (530)
|+++...+.|.+|+.+ ++ .+. +..++..-......|+++.+|.+|+|||....
T Consensus 194 yv~~~~~~~I~~~d~~~~~Gl~~~--~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~ 249 (326)
T 2ghs_A 194 YFVDTKVNRLMRVPLDARTGLPTG--KAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG 249 (326)
T ss_dssp EEEETTTCEEEEEEBCTTTCCBSS--CCEEEEECTTSSSEEEEEEECTTSCEEEEEET
T ss_pred EEEECCCCEEEEEEcccccCCccc--CceEEEECCCCCCCCCeeEECCCCCEEEEEeC
Confidence 9999888999999964 24 332 22233321223357899999999999987643
No 67
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.48 E-value=3.5e-05 Score=74.88 Aligned_cols=173 Identities=12% Similarity=0.157 Sum_probs=106.7
Q ss_pred ceEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECC-CCcEEEEEECCCcccccCccccceEEEeecCCCCeE
Q psy11539 239 LISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLK-TNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 317 (530)
Q Consensus 239 LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~-Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~ 317 (530)
...+..+.++++|+||+.|.+. .+|.+||+. ++++.....+. ...++....++++ .++.+
T Consensus 140 ~~~~~~~~~spdg~l~v~~~~~------------~~v~~~~~~~~g~~~~~~~~~---~~~g~~p~~~~~s----pdg~~ 200 (347)
T 3hfq_A 140 GSHIHYTDLTPDNRLAVIDLGS------------DKVYVYNVSDAGQLSEQSVLT---MEAGFGPRHLVFS----PDGQY 200 (347)
T ss_dssp SCCEEEEEECTTSCEEEEETTT------------TEEEEEEECTTSCEEEEEEEE---CCTTCCEEEEEEC----TTSSE
T ss_pred CCCceEEEECCCCcEEEEeCCC------------CEEEEEEECCCCcEEEeeeEE---cCCCCCCceEEEC----CCCCE
Confidence 3457788999999999999875 359999998 56654333221 1123455667776 35678
Q ss_pred EEEecCCCCeEEEEEccC--CeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccc
Q psy11539 318 AYVNDVFRYGLIVYDFFK--NTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVH 395 (530)
Q Consensus 318 AYItDsg~~gLIVyDl~~--g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~ 395 (530)
+|+++.....|.||++.. ++...+..-...+. .+ .-..++.+|+++|++
T Consensus 201 l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~----~~-------~~~~~~~~i~~spdG------------------ 251 (347)
T 3hfq_A 201 AFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPA----DY-------TAHNGAAAIRLSHDG------------------ 251 (347)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEEEEESSCT----TC-------CSCCEEEEEEECTTS------------------
T ss_pred EEEEeCCCCEEEEEEecCCCCceEEeeeeeecCC----CC-------CCCCcceeEEECCCC------------------
Confidence 999999999999999884 65433321111111 00 000134578888886
Q ss_pred ccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCc-EEEEc
Q psy11539 396 HYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGV-MFYNL 474 (530)
Q Consensus 396 ~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~-LYft~ 474 (530)
++||........+...+... +..+ ..+..+...| ..+.+++++.+|. ||++.
T Consensus 252 ---------------~~l~v~~~~~~~v~v~~~~~--~g~~--------~~~~~~~~~~--~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 252 ---------------HFLYVSNRGYNTLAVFAVTA--DGHL--------TLIQQISTEG--DFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp ---------------CEEEEEEETTTEEEEEEECG--GGCE--------EEEEEEECSS--SCCCEEEECTTSSEEEEEE
T ss_pred ---------------CEEEEEeCCCCEEEEEEECC--CCcE--------EEeEEEecCC--CCcCeEEECCCCCEEEEEE
Confidence 78888766555454443221 1111 1122221112 3578999998886 88888
Q ss_pred cCCCeEEEE--eCC
Q psy11539 475 VTKHSVGCW--NTK 486 (530)
Q Consensus 475 ~~~~aI~cW--nt~ 486 (530)
...+.|..| |..
T Consensus 305 ~~~~~v~v~~~d~~ 318 (347)
T 3hfq_A 305 QNTDNATLYARDLT 318 (347)
T ss_dssp TTTTEEEEEEECTT
T ss_pred cCCCcEEEEEEeCC
Confidence 888899999 554
No 68
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.47 E-value=1.4e-05 Score=79.86 Aligned_cols=189 Identities=9% Similarity=0.000 Sum_probs=121.8
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
-..+++.++ .++||+-..-. +.-+|.++|++|+++++++.++.. -|-..|+++ +..+|
T Consensus 43 ~ftqGL~~~-~~~LyestG~~----------g~S~v~~vD~~Tgkv~~~~~l~~~-----~FgeGit~~------g~~ly 100 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLN----------GRSSIRKVDIESGKTLQQIELGKR-----YFGEGISDW------KDKIV 100 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEET----------TEEEEEEECTTTCCEEEEEECCTT-----CCEEEEEEE------TTEEE
T ss_pred cccceEEEE-CCEEEEECCCC----------CCceEEEEECCCCcEEEEEecCCc-----cceeEEEEe------CCEEE
Confidence 346888888 68999964211 124599999999999999999653 233467777 56999
Q ss_pred EecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCC
Q psy11539 320 VNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNG 399 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~ 399 (530)
+++-....+.|||.++.+.-+ .|.+.+ .|.+|.+++
T Consensus 101 ~ltw~~~~v~v~D~~t~~~~~-------------ti~~~~---------eG~glt~dg---------------------- 136 (262)
T 3nol_A 101 GLTWKNGLGFVWNIRNLRQVR-------------SFNYDG---------EGWGLTHND---------------------- 136 (262)
T ss_dssp EEESSSSEEEEEETTTCCEEE-------------EEECSS---------CCCCEEECS----------------------
T ss_pred EEEeeCCEEEEEECccCcEEE-------------EEECCC---------CceEEecCC----------------------
Confidence 999888899999999885443 222221 345555554
Q ss_pred ccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccC-CCCCcceEEcCCCcEEEEccCCC
Q psy11539 400 TNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFK-NTQASASAINSNGVMFYNLVTKH 478 (530)
Q Consensus 400 ~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~-~sqs~G~aiD~~G~LYft~~~~~ 478 (530)
+.||-+.- |.+++.++++-++... .++ ++..|. ......++.. +|.||.+.-..+
T Consensus 137 -----------~~L~~SdG-s~~i~~iDp~T~~v~~----------~I~-V~~~g~~~~~lNELe~~-~G~lyan~w~~~ 192 (262)
T 3nol_A 137 -----------QYLIMSDG-TPVLRFLDPESLTPVR----------TIT-VTAHGEELPELNELEWV-DGEIFANVWQTN 192 (262)
T ss_dssp -----------SCEEECCS-SSEEEEECTTTCSEEE----------EEE-CEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred -----------CEEEEECC-CCeEEEEcCCCCeEEE----------EEE-eccCCccccccceeEEE-CCEEEEEEccCC
Confidence 67888774 6678888776543221 122 222111 0112234453 789999998999
Q ss_pred eEEEEeCCCCccccCceeEEeec---------CCceeecceeEEecC-CcEEEE
Q psy11539 479 SVGCWNTKTKVYLPQTQDIVQTS---------RDILNFREEGEEEEE-KENTCT 522 (530)
Q Consensus 479 aI~cWnt~~~~~~~~n~~lV~~d---------~~~L~~Pd~l~Id~d-G~lYv~ 522 (530)
.|.+.|+.++... +.|... .....-|+||++|.+ +.|||+
T Consensus 193 ~I~vIDp~tG~V~----~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 193 KIVRIDPETGKVT----GIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp EEEEECTTTCBEE----EEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred eEEEEECCCCcEE----EEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 9999999855432 223211 112346899999974 577775
No 69
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.45 E-value=1.8e-05 Score=80.27 Aligned_cols=223 Identities=9% Similarity=-0.010 Sum_probs=122.6
Q ss_pred CCceEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 237 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 237 ~~LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
++|..+.++.+++.|||||.|.+ -+|.+++ +++......++ -.......+.+|+++-.- -.++
T Consensus 28 ~~l~~P~~ia~~pdG~l~V~e~~-------------g~I~~i~--~g~~~~~~~~~-v~~~g~~~p~gia~~pdf-~~~g 90 (352)
T 2ism_A 28 GGLEVPWALAFLPDGGMLIAERP-------------GRIRLFR--EGRLSTYAELS-VYHRGESGLLGLALHPRF-PQEP 90 (352)
T ss_dssp CCCSCEEEEEECTTSCEEEEETT-------------TEEEEEE--TTEEEEEEECC-CCCSTTCSEEEEEECTTT-TTSC
T ss_pred CCCCCceEEEEcCCCeEEEEeCC-------------CeEEEEE--CCCccEeecce-EeecCCCCceeEEECCCC-CCCC
Confidence 45788999999999999999975 2488888 45433333455 222234678899998210 0158
Q ss_pred EEEEecCCC-----CeEEEEEccCCeE--EEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccc
Q psy11539 317 FAYVNDVFR-----YGLIVYDFFKNTS--YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEY 389 (530)
Q Consensus 317 ~AYItDsg~-----~gLIVyDl~~g~s--wRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~ 389 (530)
.+|+++... ..|.+|+...++. .++... .+...+.... ...+|+++|++
T Consensus 91 ~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~---------~~p~~~~~~h---~~~~l~~~pdG------------ 146 (352)
T 2ism_A 91 YVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLD---------GIPARPHGLH---SGGRIAFGPDG------------ 146 (352)
T ss_dssp EEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEE---------EECCCTTCCC---CCCCEEECTTS------------
T ss_pred EEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEE---------eCCCCCCCCc---CCceEEECCCC------------
Confidence 999999864 6788998875521 111100 0000000000 12467777764
Q ss_pred ccccccccCCccccccccCCCceEEEEeCC-------------CCeeEEEecc--hhcCccccCCccccccceEEecccc
Q psy11539 390 YHYNVHHYNGTNVDKTIRDDQRYMYFHSMS-------------SNRHYYVSTT--DLRNSSRYVNSSDIDEYFHYLGSRF 454 (530)
Q Consensus 390 y~~~~~~~~~~~~~~~~~~~~r~LYf~pls-------------S~~lY~V~T~--~Lrn~s~~~~~~~~~~~v~~lG~rG 454 (530)
+||++--. .-++++++.+ +..+..+.. ......++-..|-|
T Consensus 147 ----------------------~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~-~~~~~~~i~a~G~r- 202 (352)
T 2ism_A 147 ----------------------MLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLG-RRGARPEVYSLGHR- 202 (352)
T ss_dssp ----------------------CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTT-CTTSCTTEEEECCS-
T ss_pred ----------------------CEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccC-CCCCCccEEEEcCC-
Confidence 45555321 1367777542 111111110 00012234445654
Q ss_pred CCCCCcceEEcC-CCcEEEEccCCCe--------EEEEeCCCCccc----cCceeEEeecCCcee-----ecceeEEecC
Q psy11539 455 KNTQASASAINS-NGVMFYNLVTKHS--------VGCWNTKTKVYL----PQTQDIVQTSRDILN-----FREEGEEEEE 516 (530)
Q Consensus 455 ~~sqs~G~aiD~-~G~LYft~~~~~a--------I~cWnt~~~~~~----~~n~~lV~~d~~~L~-----~Pd~l~Id~d 516 (530)
.+-|+++|. +|.||+++...+. |...... +.|- ......-....+.+. -|+|+++ .+
T Consensus 203 ---np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G-~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~ 277 (352)
T 2ism_A 203 ---NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPG-GNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FR 277 (352)
T ss_dssp ---EECCCEECTTTCCEEEEEECC------CCCEEEEECTT-CBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ET
T ss_pred ---CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccC-CcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-EC
Confidence 478999997 8999999998776 5555444 3220 000000000012233 4789999 58
Q ss_pred CcEEEEEeeceee
Q psy11539 517 KENTCTFLVNKYV 529 (530)
Q Consensus 517 G~lYv~~~snr~~ 529 (530)
|.+||..+.++.|
T Consensus 278 G~l~v~~~~~~~v 290 (352)
T 2ism_A 278 GDLYVAGLRGQAL 290 (352)
T ss_dssp TEEEEEETTTTEE
T ss_pred CEEEEEECCCCEE
Confidence 9999988776554
No 70
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.43 E-value=3.4e-05 Score=76.31 Aligned_cols=189 Identities=11% Similarity=0.031 Sum_probs=122.0
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
-.++++..|. ++||+--.- .+.-+|.++|++|+++++++.+|... |-..|+++ +..+|
T Consensus 21 ~ftqGL~~~~-~~LyestG~----------~g~S~v~~vD~~tgkv~~~~~l~~~~-----fgeGi~~~------~~~ly 78 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGE----------TGRSSVRKVDLETGRILQRAEVPPPY-----FGAGIVAW------RDRLI 78 (243)
T ss_dssp CCEEEEEEET-TEEEEEECC----------TTSCEEEEEETTTCCEEEEEECCTTC-----CEEEEEEE------TTEEE
T ss_pred cccccEEEEC-CEEEEECCC----------CCCceEEEEECCCCCEEEEEeCCCCc-----ceeEEEEe------CCEEE
Confidence 3468889987 899985322 12356999999999999999997642 23457776 57899
Q ss_pred EecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCC
Q psy11539 320 VNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNG 399 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~ 399 (530)
+.+-...-+.|||.++.+.-+ .|...+ -|.+|..++
T Consensus 79 ~ltw~~~~v~v~D~~tl~~~~-------------ti~~~~---------~Gwglt~dg---------------------- 114 (243)
T 3mbr_X 79 QLTWRNHEGFVYDLATLTPRA-------------RFRYPG---------EGWALTSDD---------------------- 114 (243)
T ss_dssp EEESSSSEEEEEETTTTEEEE-------------EEECSS---------CCCEEEECS----------------------
T ss_pred EEEeeCCEEEEEECCcCcEEE-------------EEeCCC---------CceEEeeCC----------------------
Confidence 999888899999999885443 222221 244444443
Q ss_pred ccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCC-CCCcceEEcCCCcEEEEccCCC
Q psy11539 400 TNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKN-TQASASAINSNGVMFYNLVTKH 478 (530)
Q Consensus 400 ~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~-sqs~G~aiD~~G~LYft~~~~~ 478 (530)
+.||.+-- |.+++.++++-++... .+ .++..|.. ...-.+.. .+|.||...-..+
T Consensus 115 -----------~~L~vSdg-s~~l~~iDp~t~~~~~----------~I-~V~~~g~~~~~lNeLe~-~~G~lyanvw~s~ 170 (243)
T 3mbr_X 115 -----------SHLYMSDG-TAVIRKLDPDTLQQVG----------SI-KVTAGGRPLDNLNELEW-VNGELLANVWLTS 170 (243)
T ss_dssp -----------SCEEEECS-SSEEEEECTTTCCEEE----------EE-ECEETTEECCCEEEEEE-ETTEEEEEETTTT
T ss_pred -----------CEEEEECC-CCeEEEEeCCCCeEEE----------EE-EEccCCcccccceeeEE-eCCEEEEEECCCC
Confidence 67888875 6779988876554221 11 12222210 12223333 3788999888899
Q ss_pred eEEEEeCCCCccccCceeEEeec----------CCceeecceeEEecC-CcEEEE
Q psy11539 479 SVGCWNTKTKVYLPQTQDIVQTS----------RDILNFREEGEEEEE-KENTCT 522 (530)
Q Consensus 479 aI~cWnt~~~~~~~~n~~lV~~d----------~~~L~~Pd~l~Id~d-G~lYv~ 522 (530)
.|.+.|+.++.- .+.|... .....-++||+.|.+ +.|||+
T Consensus 171 ~I~vIDp~tG~V----~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVT 221 (243)
T 3mbr_X 171 RIARIDPASGKV----VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVT 221 (243)
T ss_dssp EEEEECTTTCBE----EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEE
T ss_pred eEEEEECCCCCE----EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEE
Confidence 999999985533 2233211 122346889999974 567764
No 71
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.42 E-value=2.3e-05 Score=76.18 Aligned_cols=253 Identities=9% Similarity=0.039 Sum_probs=139.0
Q ss_pred CCCceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCc-EEEE
Q psy11539 179 ENNLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIM 256 (530)
Q Consensus 179 ~n~iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgR-LWVL 256 (530)
...-|.+++++ +|+||++.-+. -..+|..++... + .++..-... .....+..+.++++|+ |++.
T Consensus 38 ~~~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~-g---~~~~~~~~~-------~~~~~p~~~a~spdg~~l~~~ 103 (347)
T 3hfq_A 38 ATQNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDG-Q---TAHKLNTVV-------APGTPPAYVAVDEARQLVYSA 103 (347)
T ss_dssp ECSCCCCEEECTTCEEEEEEEET---TEEEEEEEEEET-T---EEEEEEEEE-------EESCCCSEEEEETTTTEEEEE
T ss_pred ccCCcceEEEccCCeEEEEEecC---CCceEEEEEecC-C---cEEEeeeee-------cCCCCCEEEEECCCCCEEEEE
Confidence 34568889997 78888875431 123555555422 1 111100000 0123456788899887 8888
Q ss_pred eCCCCCcccCccccCCCEEEEEECC-CCcE--EEEEECCCccc---ccCccccceEEEeecCCCCeEEEEecCCCCeEEE
Q psy11539 257 DTGVTNILSSIQQLCPPKIMVFDLK-TNTL--IRKYILPTAQV---FEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIV 330 (530)
Q Consensus 257 DtG~~~~~~~~~~~c~PKLvvfDL~-Td~l--i~~y~~P~~v~---~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIV 330 (530)
+.+. ..|.+||+. ++++ +.++.....-. ........++++ .++. +|++|.+...|.+
T Consensus 104 ~~~~------------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~s----pdg~-l~v~~~~~~~v~~ 166 (347)
T 3hfq_A 104 NYHK------------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLT----PDNR-LAVIDLGSDKVYV 166 (347)
T ss_dssp ETTT------------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEEC----TTSC-EEEEETTTTEEEE
T ss_pred eCCC------------CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEEC----CCCc-EEEEeCCCCEEEE
Confidence 7542 348899985 3333 33333321100 012335567776 2344 9999999999999
Q ss_pred EEcc-CCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCC
Q psy11539 331 YDFF-KNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDD 409 (530)
Q Consensus 331 yDl~-~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 409 (530)
||+. +|+.-.+.. +.+ ....+..+|+++|++
T Consensus 167 ~~~~~~g~~~~~~~-----------~~~-----~~g~~p~~~~~spdg-------------------------------- 198 (347)
T 3hfq_A 167 YNVSDAGQLSEQSV-----------LTM-----EAGFGPRHLVFSPDG-------------------------------- 198 (347)
T ss_dssp EEECTTSCEEEEEE-----------EEC-----CTTCCEEEEEECTTS--------------------------------
T ss_pred EEECCCCcEEEeee-----------EEc-----CCCCCCceEEECCCC--------------------------------
Confidence 9998 554322210 000 001134578888876
Q ss_pred CceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEecccc----CCCCCcceEEcCCCc-EEEEccCCCeEEEEe
Q psy11539 410 QRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRF----KNTQASASAINSNGV-MFYNLVTKHSVGCWN 484 (530)
Q Consensus 410 ~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG----~~sqs~G~aiD~~G~-LYft~~~~~aI~cWn 484 (530)
++||+....+..+..++... ....+ ..+..+.... ....+.+++++.+|. ||++....+.|.+|+
T Consensus 199 -~~l~v~~~~~~~v~v~~~~~-~~g~~--------~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~ 268 (347)
T 3hfq_A 199 -QYAFLAGELSSQIASLKYDT-QTGAF--------TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFA 268 (347)
T ss_dssp -SEEEEEETTTTEEEEEEEET-TTTEE--------EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEE
T ss_pred -CEEEEEeCCCCEEEEEEecC-CCCce--------EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEE
Confidence 77888766666554443221 00000 0111111100 012467799998886 889888889999999
Q ss_pred CCCCccccCceeEEeecCCceeecceeEEecCCc-EEEEEe
Q psy11539 485 TKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKE-NTCTFL 524 (530)
Q Consensus 485 t~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~-lYv~~~ 524 (530)
.+ .. .....+..-...-.+|.+++++.+|. ||+...
T Consensus 269 ~~-~~---g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 269 VT-AD---GHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp EC-GG---GCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred EC-CC---CcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence 75 21 02233332222234688999998885 666543
No 72
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.41 E-value=2.6e-05 Score=74.74 Aligned_cols=206 Identities=11% Similarity=0.081 Sum_probs=125.3
Q ss_pred eeEEe-CCe-EEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEE-EEEeCCCcEEEEeCCCC
Q psy11539 185 GIGIW-RST-IFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFR-MSVDKCDRLWIMDTGVT 261 (530)
Q Consensus 185 GV~v~-~gR-lFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~r-v~ID~cgRLWVLDtG~~ 261 (530)
+++++ +++ +|++... . .+|..++..... ..+..... + ..+.. +.++.+|+..++..+.
T Consensus 44 ~~~~s~dg~~l~~~~~~--~---~~i~~~d~~~~~--~~~~~~~~---~--------~~~~~~~~~s~dg~~l~~~~~~- 104 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDF--C---QTLVQIETQLEP--PKVVAIQE---G--------QSSMADVDITPDDQFAVTVTGL- 104 (331)
T ss_dssp EEEECSSSCEEEEEEST--T---CEEEEEECSSSS--CEEEEEEE---C--------SSCCCCEEECTTSSEEEECCCS-
T ss_pred eEEEcCCCCEEEEEeCC--C---CeEEEEECCCCc--eeEEeccc---C--------CCCccceEECCCCCEEEEecCC-
Confidence 88886 554 8887532 2 278778764321 10111100 0 11223 6788888765543322
Q ss_pred CcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCe-EEEEEccCCeEEE
Q psy11539 262 NILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYG-LIVYDFFKNTSYR 340 (530)
Q Consensus 262 ~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~g-LIVyDl~~g~swR 340 (530)
.+..+|.+||++++++++.+.... ....++++ .++.++|+++..... |.+|++..+....
T Consensus 105 --------~~~~~i~v~d~~~~~~~~~~~~~~-------~~~~~~~s----pdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 105 --------NHPFNMQSYSFLKNKFISTIPIPY-------DAVGIAIS----PNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp --------SSSCEEEEEETTTTEEEEEEECCT-------TEEEEEEC----TTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred --------CCcccEEEEECCCCCeEEEEECCC-------CccceEEC----CCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 123479999999999998876633 23677776 245689999998777 9999988642211
Q ss_pred EcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeCCC
Q psy11539 341 LTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSS 420 (530)
Q Consensus 341 v~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS 420 (530)
....+.+....+..+++++|++ ++||+....+
T Consensus 166 ---------------~~~~~~~~~~~~~~~~~~spdg---------------------------------~~l~v~~~~~ 197 (331)
T 3u4y_A 166 ---------------DTGQEFISGGTRPFNITFTPDG---------------------------------NFAFVANLIG 197 (331)
T ss_dssp ---------------EEEEEEECSSSSEEEEEECTTS---------------------------------SEEEEEETTT
T ss_pred ---------------ecCCccccCCCCccceEECCCC---------------------------------CEEEEEeCCC
Confidence 0000111111244678888876 7888888777
Q ss_pred CeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCc-EEEEccCCCeEEEEeCCCCc
Q psy11539 421 NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGV-MFYNLVTKHSVGCWNTKTKV 489 (530)
Q Consensus 421 ~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~-LYft~~~~~aI~cWnt~~~~ 489 (530)
..++.++.+-.+ ....+..+.. + ..+.+++++.+|. ||++....+.|.+||..++.
T Consensus 198 ~~v~v~d~~~~~----------~~~~~~~~~~-~--~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 198 NSIGILETQNPE----------NITLLNAVGT-N--NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGT 254 (331)
T ss_dssp TEEEEEECSSTT----------SCEEEEEEEC-S--SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTE
T ss_pred CeEEEEECCCCc----------ccceeeeccC-C--CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCc
Confidence 778777643111 1001222221 1 3678899998888 88888888899999998443
No 73
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.35 E-value=0.00028 Score=70.08 Aligned_cols=126 Identities=17% Similarity=0.211 Sum_probs=84.1
Q ss_pred ceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeCCC
Q psy11539 182 LPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGV 260 (530)
Q Consensus 182 iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDtG~ 260 (530)
-|.++++. +++++++.-+ .| +|..++...+. .++-.+.-.+. .....|..+.++.++++|+...+.
T Consensus 124 ~~~~~~~s~~~~~~~~~~~--~~---~i~~~d~~~g~---~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~s~~~d 190 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLE--DE---GMDVLDINSGQ---TVRLSPPEKYK-----KKLGFVETISIPEHNELWVSQMQA 190 (433)
T ss_dssp CBCCCEESSSSEEEEEBTT--SS---SEEEEETTTCC---EEEECCCHHHH-----TTCCEEEEEEEGGGTEEEEEEGGG
T ss_pred CceEEEEeCCCeEEEEeCC--CC---eEEEEECCCCe---EeeecCccccc-----ccCCceeEEEEcCCCEEEEEECCC
Confidence 35567776 6888888533 22 57777764322 12111110110 123467778888899999987642
Q ss_pred CCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEE
Q psy11539 261 TNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 261 ~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swR 340 (530)
.+|.+||+++++.++++... ......++++ .++.++|+++.....|.+||+++++.-+
T Consensus 191 ------------~~v~~~d~~~~~~~~~~~~~------~~~~~~~~~~----~~~~~l~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 191 ------------NAVHVFDLKTLAYKATVDLT------GKWSKILLYD----PIRDLVYCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp ------------TEEEEEETTTCCEEEEEECS------SSSEEEEEEE----TTTTEEEEEETTTTEEEEEETTTTEEEE
T ss_pred ------------CEEEEEECCCceEEEEEcCC------CCCeeEEEEc----CCCCEEEEEecCCCcEEEEECCCCcEEE
Confidence 35999999999999877632 2345677777 3577899999888899999999987655
Q ss_pred Ec
Q psy11539 341 LT 342 (530)
Q Consensus 341 v~ 342 (530)
..
T Consensus 249 ~~ 250 (433)
T 3bws_A 249 KT 250 (433)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 74
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.32 E-value=0.00016 Score=70.68 Aligned_cols=216 Identities=15% Similarity=0.211 Sum_probs=122.1
Q ss_pred CceeeeEEeCCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCC-C---CCCCceEEEEEEEeCCCc-EEE
Q psy11539 181 NLPLGIGIWRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDD-S---NCNSLISVFRMSVDKCDR-LWI 255 (530)
Q Consensus 181 ~iP~GV~v~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~-~---nc~~LvSV~rv~ID~cgR-LWV 255 (530)
.-|.++++...+||++-- .. .++..++....+ .+........+.. + .....-.+..+.++++|+ |++
T Consensus 100 ~~p~~~~~dg~~l~~~~~--~~---~~v~~~~~~~~g---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~ 171 (361)
T 3scy_A 100 ADPCYLTTNGKNIVTANY--SG---GSITVFPIGQDG---ALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLA 171 (361)
T ss_dssp SCEEEEEECSSEEEEEET--TT---TEEEEEEBCTTS---CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEE
T ss_pred CCcEEEEECCCEEEEEEC--CC---CEEEEEEeCCCC---cCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEE
Confidence 457788884455777642 12 367667654322 1211111000000 0 011233478899999997 999
Q ss_pred EeCCCCCcccCccccCCCEEEEEECCCCc-------EE-----EEEECCCcccccCccccceEEEeecCCCCeEEEEecC
Q psy11539 256 MDTGVTNILSSIQQLCPPKIMVFDLKTNT-------LI-----RKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV 323 (530)
Q Consensus 256 LDtG~~~~~~~~~~~c~PKLvvfDL~Td~-------li-----~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs 323 (530)
.|.|. -+|.+|++..+. +. ..+.++ .+.....++++ .++.++|+++.
T Consensus 172 ~~~~~------------~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~s----pdg~~l~v~~~ 230 (361)
T 3scy_A 172 DDLGT------------DQIHKFNINPNANADNKEKFLTKGTPEAFKVA-----PGSGPRHLIFN----SDGKFAYLINE 230 (361)
T ss_dssp EETTT------------TEEEEEEECTTCCTTTCCCCEEEEEEEEEECC-----TTCCEEEEEEC----TTSSEEEEEET
T ss_pred EeCCC------------CEEEEEEEcCCCCcccccceeecccccceecC-----CCCCCeEEEEc----CCCCEEEEEcC
Confidence 99765 247778776543 32 233332 23455677776 35669999998
Q ss_pred CCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCcccc
Q psy11539 324 FRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVD 403 (530)
Q Consensus 324 g~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 403 (530)
....|.|||+.+++.-.+..-...+. . ..+..+|+++|++
T Consensus 231 ~~~~v~v~~~~~g~~~~~~~~~~~~~----~----------~~~~~~i~~spdg-------------------------- 270 (361)
T 3scy_A 231 IGGTVIAFRYADGMLDEIQTVAADTV----N----------AQGSGDIHLSPDG-------------------------- 270 (361)
T ss_dssp TTCEEEEEEEETTEEEEEEEEESCSS----C----------CCCEEEEEECTTS--------------------------
T ss_pred CCCeEEEEEecCCceEEeEEEecCCC----C----------CCCcccEEECCCC--------------------------
Confidence 88899999999885433321110010 0 0134578898886
Q ss_pred ccccCCCceEEEEeCC-CC--eeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCc-EEEEccCCCe
Q psy11539 404 KTIRDDQRYMYFHSMS-SN--RHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGV-MFYNLVTKHS 479 (530)
Q Consensus 404 ~~~~~~~r~LYf~pls-S~--~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~-LYft~~~~~a 479 (530)
++||..... .. .+|.++.. ...+ ..+..+.. | ..+.+++++.+|. ||++....+.
T Consensus 271 -------~~l~v~~~~~~~~i~v~~~~~~---~g~~--------~~~~~~~~-g--~~~~~~~~spdg~~l~~~~~~~~~ 329 (361)
T 3scy_A 271 -------KYLYASNRLKADGVAIFKVDET---NGTL--------TKVGYQLT-G--IHPRNFIITPNGKYLLVACRDTNV 329 (361)
T ss_dssp -------SEEEEEECSSSCEEEEEEECTT---TCCE--------EEEEEEEC-S--SCCCEEEECTTSCEEEEEETTTTE
T ss_pred -------CEEEEECCCCCCEEEEEEEcCC---CCcE--------EEeeEecC-C--CCCceEEECCCCCEEEEEECCCCC
Confidence 788877655 33 34444311 0111 11112211 2 3578899998886 8888877788
Q ss_pred EEEE--eCC
Q psy11539 480 VGCW--NTK 486 (530)
Q Consensus 480 I~cW--nt~ 486 (530)
|..| |..
T Consensus 330 v~v~~~d~~ 338 (361)
T 3scy_A 330 IQIFERDQA 338 (361)
T ss_dssp EEEEEECTT
T ss_pred EEEEEEECC
Confidence 8874 554
No 75
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.31 E-value=6e-05 Score=76.84 Aligned_cols=219 Identities=8% Similarity=0.017 Sum_probs=121.1
Q ss_pred CCceEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 237 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 237 ~~LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
.+|..+.+|.+++.|||||.|.. -+|.++|. +++ .....++ -.......+.+|+++-.- ..++
T Consensus 26 ~~l~~P~~ia~~pdG~l~V~e~~-------------g~I~~~d~-~G~-~~~~~~~-v~~~g~~g~~gia~~pdf-~~~g 88 (354)
T 3a9g_A 26 SDLEVPWSIAPLGGGRYLVTERP-------------GRLVLISP-SGK-KLVASFD-VANVGEAGLLGLALHPEF-PKKS 88 (354)
T ss_dssp CSCSCEEEEEEEETTEEEEEETT-------------TEEEEECS-SCE-EEEEECC-CCCSTTCSEEEEEECTTT-TTSC
T ss_pred CCCCCCeEEEEcCCCeEEEEeCC-------------CEEEEEeC-CCc-eEeeccc-eeecCCCceeeEEeCCCC-CcCC
Confidence 45888999999999999999975 24888874 555 2223454 112234668899998210 1258
Q ss_pred EEEEecCC---C----CeEEEEEccCCe----EEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCC
Q psy11539 317 FAYVNDVF---R----YGLIVYDFFKNT----SYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRH 385 (530)
Q Consensus 317 ~AYItDsg---~----~gLIVyDl~~g~----swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~ 385 (530)
.+|++++. . ..|.+|+...+. ..++. +.+.+-.-.-...+|+++|++
T Consensus 89 ~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l--------------~~~~~~~~~h~~~~l~~~pDG-------- 146 (354)
T 3a9g_A 89 WVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTL--------------IDGIPGAYIHNGGRIRFGPDG-------- 146 (354)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEE--------------EEEEECCSSCCCCCEEECTTS--------
T ss_pred EEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEE--------------EEcCCCCCCcCCceEEECCCC--------
Confidence 99999874 2 568888876541 11111 011000000012357777764
Q ss_pred CcccccccccccCCccccccccCCCceEEEEeCC-------------CCeeEEEecchhcCccccCCccccccceEEecc
Q psy11539 386 PYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMS-------------SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGS 452 (530)
Q Consensus 386 ~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pls-------------S~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~ 452 (530)
+||++--. .-++++++.+ .+......-...++-..|-
T Consensus 147 --------------------------~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d----G~~p~~npf~~~~i~a~G~ 196 (354)
T 3a9g_A 147 --------------------------MLYITTGDAADPRLAQDLSSLAGKILRVDEE----GRPPADNPFPNSPIWSYGH 196 (354)
T ss_dssp --------------------------CEEEECCCTTCGGGGTCTTCCSSEEEEECTT----SCCCTTSSSTTCCEEEECC
T ss_pred --------------------------cEEEEECCCCCCccccCCCCCCeEEEEEcCC----CCCCCCCCCCCCcEEEEcc
Confidence 46665321 1257777542 2211000000123444565
Q ss_pred ccCCCCCcceEEcC-CCcEEEEccCCCe---EEEEeCCCCccc----cCceeEEeecCCceee------cceeEE-----
Q psy11539 453 RFKNTQASASAINS-NGVMFYNLVTKHS---VGCWNTKTKVYL----PQTQDIVQTSRDILNF------REEGEE----- 513 (530)
Q Consensus 453 rG~~sqs~G~aiD~-~G~LYft~~~~~a---I~cWnt~~~~~~----~~n~~lV~~d~~~L~~------Pd~l~I----- 513 (530)
| .+-|+++|. +|.||+++...+. |...... +.|- ......-......+.| |+|+++
T Consensus 197 r----np~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G-~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~ 271 (354)
T 3a9g_A 197 R----NPQGIDWHRASGVMVATEHGPVGHDEVNIILKG-GNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDM 271 (354)
T ss_dssp S----CCCEEEECTTTCCEEEEECCSSSCCEEEEECTT-CBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSS
T ss_pred C----CcceEEEeCCCCCEEEEecCCCCCcEEEEecCC-CcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCC
Confidence 5 478999997 8999999988754 5555443 3220 0000000001233455 899999
Q ss_pred --ecCCcEEEEEeeceee
Q psy11539 514 --EEEKENTCTFLVNKYV 529 (530)
Q Consensus 514 --d~dG~lYv~~~snr~~ 529 (530)
+.+|.+||.......|
T Consensus 272 fp~~~G~l~v~~~~~~~v 289 (354)
T 3a9g_A 272 FPGLRGWLLIACLRGSML 289 (354)
T ss_dssp CGGGTTEEEEEETTTTEE
T ss_pred CcccCCcEEEEEcCCCEE
Confidence 5688999887665443
No 76
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.31 E-value=0.0001 Score=69.96 Aligned_cols=164 Identities=15% Similarity=0.164 Sum_probs=101.0
Q ss_pred EEEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEEECC--CCcEEEEEECCCcccccCccccceEEEeecCCCCeE
Q psy11539 241 SVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLK--TNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 317 (530)
Q Consensus 241 SV~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~--Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~ 317 (530)
.+..+.++.+|+ |++.+.+. .+|.+||+. ++++...-.++. ......++++ .++.+
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~------------~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~s----~dg~~ 97 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPE------------FRVLAYRIAPDDGALTFAAESAL-----PGSLTHISTD----HQGQF 97 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTT------------TEEEEEEECTTTCCEEEEEEEEC-----SSCCSEEEEC----TTSSE
T ss_pred CCceEEECCCCCEEEEeecCC------------CeEEEEEecCCCCceeecccccc-----CCCCcEEEEc----CCCCE
Confidence 455678888876 88887752 348888886 666443333321 1245677776 35778
Q ss_pred EEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccccc
Q psy11539 318 AYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHY 397 (530)
Q Consensus 318 AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~ 397 (530)
+|+++.....|.+||+..++..+.... +. -...+.+++++|++
T Consensus 98 l~~~~~~~~~i~~~d~~~~~~~~~~~~------------~~-----~~~~~~~~~~s~dg-------------------- 140 (343)
T 1ri6_A 98 VFVGSYNAGNVSVTRLEDGLPVGVVDV------------VE-----GLDGCHSANISPDN-------------------- 140 (343)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEE------------EC-----CCTTBCCCEECTTS--------------------
T ss_pred EEEEecCCCeEEEEECCCCcccccccc------------cc-----CCCCceEEEECCCC--------------------
Confidence 999998888899999965544433211 01 11235578888875
Q ss_pred CCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccce--EEeccccCCCCCcceEEcCCCc-EEEEc
Q psy11539 398 NGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYF--HYLGSRFKNTQASASAINSNGV-MFYNL 474 (530)
Q Consensus 398 ~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v--~~lG~rG~~sqs~G~aiD~~G~-LYft~ 474 (530)
+.||.......+++.++... +... .... ......| ..+.+++++.+|. ||++.
T Consensus 141 -------------~~l~~~~~~~~~v~~~d~~~--~~~~-------~~~~~~~~~~~~~--~~~~~~~~~pdg~~l~~~~ 196 (343)
T 1ri6_A 141 -------------RTLWVPALKQDRICLFTVSD--DGHL-------VAQDPAEVTTVEG--AGPRHMVFHPNEQYAYCVN 196 (343)
T ss_dssp -------------SEEEEEEGGGTEEEEEEECT--TSCE-------EEEEEEEEECSTT--CCEEEEEECTTSSEEEEEE
T ss_pred -------------CEEEEecCCCCEEEEEEecC--CCce-------eeecccccccCCC--CCcceEEECCCCCEEEEEe
Confidence 67887775556666655321 0111 0000 1111112 3466789998886 88888
Q ss_pred cCCCeEEEEeCC
Q psy11539 475 VTKHSVGCWNTK 486 (530)
Q Consensus 475 ~~~~aI~cWnt~ 486 (530)
...+.|..|+.+
T Consensus 197 ~~~~~i~~~~~~ 208 (343)
T 1ri6_A 197 ELNSSVDVWELK 208 (343)
T ss_dssp TTTTEEEEEESS
T ss_pred CCCCEEEEEEec
Confidence 888999999985
No 77
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.28 E-value=1.9e-05 Score=75.43 Aligned_cols=122 Identities=11% Similarity=0.011 Sum_probs=77.5
Q ss_pred eeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCc-EEEEeCCC
Q psy11539 183 PLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIMDTGV 260 (530)
Q Consensus 183 P~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgR-LWVLDtG~ 260 (530)
.+|+++. ++++|++... ..+|..++..+.. .+.-++. . ....+..+.++.+|+ ||+...+.
T Consensus 2 ~~g~~~~~~~~~~v~~~~-----~~~v~~~d~~~~~---~~~~~~~---~------~~~~~~~~~~s~dg~~~~v~~~~~ 64 (349)
T 1jmx_B 2 DTGPALKAGHEYMIVTNY-----PNNLHVVDVASDT---VYKSCVM---P------DKFGPGTAMMAPDNRTAYVLNNHY 64 (349)
T ss_dssp --CCCCCTTCEEEEEEET-----TTEEEEEETTTTE---EEEEEEC---S------SCCSSCEEEECTTSSEEEEEETTT
T ss_pred CccccccCCCEEEEEeCC-----CCeEEEEECCCCc---EEEEEec---C------CCCCCceeEECCCCCEEEEEeCCC
Confidence 3577775 6888888643 3478888864321 1211111 0 001245678888875 88887543
Q ss_pred CCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC-----------CCeEE
Q psy11539 261 TNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-----------RYGLI 329 (530)
Q Consensus 261 ~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg-----------~~gLI 329 (530)
.+|.+||++++++++++.++..-.........++++ .++.++|+++.. ...|.
T Consensus 65 ------------~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~s----pdg~~l~~~~~~~~~~~~~~~~~~~~i~ 128 (349)
T 1jmx_B 65 ------------GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAIS----PDGKEVYATVNPTQRLNDHYVVKPPRLE 128 (349)
T ss_dssp ------------TEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEEC----TTSSEEEEEEEEEEECSSCEEECCCEEE
T ss_pred ------------CcEEEEeCCCCcEEEEEEcccccccccccccceEEC----CCCCEEEEEcccccccccccccCCCeEE
Confidence 459999999999999888754210112335677776 356789998854 56899
Q ss_pred EEEccCCe
Q psy11539 330 VYDFFKNT 337 (530)
Q Consensus 330 VyDl~~g~ 337 (530)
+||+.+++
T Consensus 129 ~~d~~~~~ 136 (349)
T 1jmx_B 129 VFSTADGL 136 (349)
T ss_dssp EEEGGGGG
T ss_pred EEECCCcc
Confidence 99998864
No 78
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.28 E-value=6.7e-05 Score=74.34 Aligned_cols=212 Identities=14% Similarity=0.122 Sum_probs=129.2
Q ss_pred eeeeEEe--CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeCCC
Q psy11539 183 PLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGV 260 (530)
Q Consensus 183 P~GV~v~--~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDtG~ 260 (530)
+.|+++. .++||+..=+ +.+|.+++.. +. .++-.|- .++-..-+|.++..|++||+|-+.
T Consensus 29 lSGla~~~~~~~L~aV~d~-----~~~I~~ld~~-g~---v~~~i~l---------~g~~D~EGIa~~~~g~~~vs~E~~ 90 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTINK-----PAAIVEMTTN-GD---LIRTIPL---------DFVKDLETIEYIGDNQFVISDERD 90 (255)
T ss_dssp EEEEEEETTTTEEEEEEET-----TEEEEEEETT-CC---EEEEEEC---------SSCSSEEEEEECSTTEEEEEETTT
T ss_pred cceeEEeCCCCEEEEEECC-----CCeEEEEeCC-CC---EEEEEec---------CCCCChHHeEEeCCCEEEEEECCC
Confidence 7899997 6899987522 5689999875 22 3433332 223457788999999999999875
Q ss_pred CCcccCccccCCCEEEEEECCCCc---EEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCC-eEEEEEc--c
Q psy11539 261 TNILSSIQQLCPPKIMVFDLKTNT---LIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRY-GLIVYDF--F 334 (530)
Q Consensus 261 ~~~~~~~~~~c~PKLvvfDL~Td~---li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~-gLIVyDl--~ 334 (530)
.+|++|++..+. .+.++.++-.....+..+-.|++|. .+..+|++--..+ +|+.|+- .
T Consensus 91 ------------~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~----~~~~L~va~E~~p~~i~~~~g~~~ 154 (255)
T 3qqz_A 91 ------------YAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSR----QDHTFWFFKEKNPIEVYKVNGLLS 154 (255)
T ss_dssp ------------TEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEET----TTTEEEEEEESSSEEEEEEESTTC
T ss_pred ------------CcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeC----CCCEEEEEECcCCceEEEEccccc
Confidence 358999887654 5677777532234466789999992 4558899877666 7888871 1
Q ss_pred CCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEE
Q psy11539 335 KNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMY 414 (530)
Q Consensus 335 ~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LY 414 (530)
+...-.+.++.+ .+. + ...++-||++.|.. ..||
T Consensus 155 ~~~l~i~~~~~~-----------~~~-~-~~~d~S~l~~dp~t---------------------------------g~ll 188 (255)
T 3qqz_A 155 SNELHISKDKAL-----------QRQ-F-TLDDVSGAEFNQQK---------------------------------NTLL 188 (255)
T ss_dssp SSCCEEEECHHH-----------HHT-C-CSSCCCEEEEETTT---------------------------------TEEE
T ss_pred CCceeeecchhh-----------ccc-c-ccCCceeEEEcCCC---------------------------------CeEE
Confidence 110000000000 000 0 01234566665543 5677
Q ss_pred EEeCCCCeeEEEecchhcCccccCCccccccceEEe-cccc---CCCCCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 415 FHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYL-GSRF---KNTQASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 415 f~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~l-G~rG---~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
.-.=.|..|..++..- +......+. |.-| .-.|+-|++||.+|+||++. +.|-++++...
T Consensus 189 iLS~~s~~L~~~d~~g-----------~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs-E~n~~y~f~~~ 252 (255)
T 3qqz_A 189 VLSHESRALQEVTLVG-----------EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS-EPNRFYRFTPQ 252 (255)
T ss_dssp EEETTTTEEEEECTTC-----------CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE-TTTEEEEEEC-
T ss_pred EEECCCCeEEEEcCCC-----------CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc-CCceEEEEEec
Confidence 7777777776665321 111111122 1111 12599999999999999994 55789988765
No 79
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.26 E-value=3.6e-05 Score=77.22 Aligned_cols=185 Identities=9% Similarity=-0.037 Sum_probs=120.1
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
..+++..| .++||+..... -+|.++|++|+++++++ +++. -|-..|+++ +..+|+
T Consensus 56 ftqGL~~~-~~~Ly~stG~~------------g~v~~iD~~Tgkv~~~~-l~~~-----~FgeGit~~------g~~Ly~ 110 (268)
T 3nok_A 56 FTQGLVFH-QGHFFESTGHQ------------GTLRQLSLESAQPVWME-RLGN-----IFAEGLASD------GERLYQ 110 (268)
T ss_dssp CEEEEEEE-TTEEEEEETTT------------TEEEECCSSCSSCSEEE-ECTT-----CCEEEEEEC------SSCEEE
T ss_pred ccceEEEE-CCEEEEEcCCC------------CEEEEEECCCCcEEeEE-CCCC-----cceeEEEEe------CCEEEE
Confidence 35778887 48999976543 12999999999999999 8753 222456775 568999
Q ss_pred ecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCc
Q psy11539 321 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGT 400 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~ 400 (530)
.+-...-+.|||.++.+.-+ .|.+.+ -|.+|.+++
T Consensus 111 ltw~~~~v~V~D~~Tl~~~~-------------ti~~~~---------eGwGLt~Dg----------------------- 145 (268)
T 3nok_A 111 LTWTEGLLFTWSGMPPQRER-------------TTRYSG---------EGWGLCYWN----------------------- 145 (268)
T ss_dssp EESSSCEEEEEETTTTEEEE-------------EEECSS---------CCCCEEEET-----------------------
T ss_pred EEccCCEEEEEECCcCcEEE-------------EEeCCC---------ceeEEecCC-----------------------
Confidence 98888899999999885543 222211 244444544
Q ss_pred cccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccC-CCCCcceEEcCCCcEEEEccCCCe
Q psy11539 401 NVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFK-NTQASASAINSNGVMFYNLVTKHS 479 (530)
Q Consensus 401 ~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~-~sqs~G~aiD~~G~LYft~~~~~a 479 (530)
+.||-+- .|.+++.++++-++... .++ ++.+|. -.....++.. +|.||.+.-..+.
T Consensus 146 ----------~~L~vSd-Gs~~l~~iDp~T~~v~~----------~I~-V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~ 202 (268)
T 3nok_A 146 ----------GKLVRSD-GGTMLTFHEPDGFALVG----------AVQ-VKLRGQPVELINELECA-NGVIYANIWHSSD 202 (268)
T ss_dssp ----------TEEEEEC-SSSEEEEECTTTCCEEE----------EEE-CEETTEECCCEEEEEEE-TTEEEEEETTCSE
T ss_pred ----------CEEEEEC-CCCEEEEEcCCCCeEEE----------EEE-eCCCCcccccccccEEe-CCEEEEEECCCCe
Confidence 7888887 47789988876654221 122 222221 1123334443 7899999988999
Q ss_pred EEEEeCCCCccccCceeEEeec----------CCceeecceeEEecC-CcEEEE
Q psy11539 480 VGCWNTKTKVYLPQTQDIVQTS----------RDILNFREEGEEEEE-KENTCT 522 (530)
Q Consensus 480 I~cWnt~~~~~~~~n~~lV~~d----------~~~L~~Pd~l~Id~d-G~lYv~ 522 (530)
|.+.|++++... +.|... .....-++||+.+.+ +.|||+
T Consensus 203 I~vIDp~TG~V~----~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVT 252 (268)
T 3nok_A 203 VLEIDPATGTVV----GVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMT 252 (268)
T ss_dssp EEEECTTTCBEE----EEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEE
T ss_pred EEEEeCCCCcEE----EEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEe
Confidence 999999855432 222211 112236789999974 577774
No 80
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.26 E-value=0.00014 Score=74.17 Aligned_cols=271 Identities=7% Similarity=-0.006 Sum_probs=140.3
Q ss_pred CceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCC----CcEEE
Q psy11539 181 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKC----DRLWI 255 (530)
Q Consensus 181 ~iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~c----gRLWV 255 (530)
..|.++++. +|||||+-.. -.|..++.+ +. -.+.-.|- .+.+...+.+|.+|++ ++|||
T Consensus 29 ~~P~~ia~~pdG~l~V~e~~------g~I~~~d~~--G~-~~~~~~~v-------~~~g~~g~~gia~~pdf~~~g~lyv 92 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVTERP------GRLVLISPS--GK-KLVASFDV-------ANVGEAGLLGLALHPEFPKKSWVYL 92 (354)
T ss_dssp SCEEEEEEEETTEEEEEETT------TEEEEECSS--CE-EEEEECCC-------CCSTTCSEEEEEECTTTTTSCEEEE
T ss_pred CCCeEEEEcCCCeEEEEeCC------CEEEEEeCC--Cc-eEeeccce-------eecCCCceeeEEeCCCCCcCCEEEE
Confidence 358999997 8999999532 367666422 21 11222231 1133456789999986 89999
Q ss_pred EeCC-CCCcccCccccCCCEEEEEECCCC--cEEE---EE-ECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeE
Q psy11539 256 MDTG-VTNILSSIQQLCPPKIMVFDLKTN--TLIR---KY-ILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGL 328 (530)
Q Consensus 256 LDtG-~~~~~~~~~~~c~PKLvvfDL~Td--~li~---~y-~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gL 328 (530)
.++. ..+ + ....+|+.|++..+ ++.. .+ .+|. ......++|+++ .++.+||++......
T Consensus 93 ~~~~~~~~--~----~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~---~~~h~~~~l~~~-----pDG~Lyvt~G~~~~~ 158 (354)
T 3a9g_A 93 YASYFAEG--G----HIRNRVIRGRLDGSTFKLKEVKTLIDGIPG---AYIHNGGRIRFG-----PDGMLYITTGDAADP 158 (354)
T ss_dssp EEEEECGG--G----CEEEEEEEEEECSSSCCEEEEEEEEEEEEC---CSSCCCCCEEEC-----TTSCEEEECCCTTCG
T ss_pred EEeccCCC--C----CcceEEEEEEECCCCcCcCccEEEEEcCCC---CCCcCCceEEEC-----CCCcEEEEECCCCCC
Confidence 9985 211 0 01246999998765 2211 11 1332 123456789998 578999996421100
Q ss_pred -EEE--EccCCeEEEEcCCCCCcCCCcceeeecCeEeee-cCCccceecCCCcccccccCCCcccccccccccCCccccc
Q psy11539 329 -IVY--DFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRW-VDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDK 404 (530)
Q Consensus 329 -IVy--Dl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~-~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~ 404 (530)
..- +...|+.+|+.-.--.|.. ..| ...+.+.+ .-...||+++|+.
T Consensus 159 ~~~~d~~~~~G~I~ri~~dG~~p~~--npf-~~~~i~a~G~rnp~Gla~d~~~--------------------------- 208 (354)
T 3a9g_A 159 RLAQDLSSLAGKILRVDEEGRPPAD--NPF-PNSPIWSYGHRNPQGIDWHRAS--------------------------- 208 (354)
T ss_dssp GGGTCTTCCSSEEEEECTTSCCCTT--SSS-TTCCEEEECCSCCCEEEECTTT---------------------------
T ss_pred ccccCCCCCCeEEEEEcCCCCCCCC--CCC-CCCcEEEEccCCcceEEEeCCC---------------------------
Confidence 000 0112445554321101110 011 01111111 1235688888842
Q ss_pred cccCCCceEEEEeCCCCe---eEEEecchhcCcccc---C--CccccccceEEeccccCCCCCcceEE-------cCCCc
Q psy11539 405 TIRDDQRYMYFHSMSSNR---HYYVSTTDLRNSSRY---V--NSSDIDEYFHYLGSRFKNTQASASAI-------NSNGV 469 (530)
Q Consensus 405 ~~~~~~r~LYf~plsS~~---lY~V~T~~Lrn~s~~---~--~~~~~~~~v~~lG~rG~~sqs~G~ai-------D~~G~ 469 (530)
..||.+-..... +..|.... +-... . ........+..++.. ...+.|+++ +-+|.
T Consensus 209 ------g~l~v~d~g~~~~dei~~i~~G~--nyGwp~~~g~~~~~~~~~p~~~~~~~--~~ap~G~~~y~g~~fp~~~G~ 278 (354)
T 3a9g_A 209 ------GVMVATEHGPVGHDEVNIILKGG--NYGWPLATGKAGRGEFVDPVIDTGSE--TWAPSGASFVHGDMFPGLRGW 278 (354)
T ss_dssp ------CCEEEEECCSSSCCEEEEECTTC--BCCTTTCCSCCCCTTSCCCSEECTTC--CCCEEEEEECCSSSCGGGTTE
T ss_pred ------CCEEEEecCCCCCcEEEEecCCC--cCCCCcccCCCCCCCCcCCEeecCCC--CcCCcceEEECCCCCcccCCc
Confidence 345655544432 33332110 00000 0 000111122333321 235788888 56899
Q ss_pred EEEEccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEe
Q psy11539 470 MFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFL 524 (530)
Q Consensus 470 LYft~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~ 524 (530)
||+++...+.|.+.+.+ +.=.....+.+.. .....|.+++++.||.|||+..
T Consensus 279 l~v~~~~~~~v~~~~~~-~~g~~~~~~~~~~--~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 279 LLIACLRGSMLAAVNFG-DNMEVRKISTFFK--NVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEEETTTTEEEEEEEC-GGGCEEEEEEECT--TTSCCEEEEEECTTSCEEEEEC
T ss_pred EEEEEcCCCEEEEEEEC-CCCcccceeeecc--CCCCCeeEEEECCCCcEEEEEe
Confidence 99999999999999887 3110001112221 1245689999999999999764
No 81
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.26 E-value=0.00015 Score=71.07 Aligned_cols=153 Identities=14% Similarity=0.174 Sum_probs=104.9
Q ss_pred EEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 242 VFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 242 V~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
+..+.+..+|+ |++...+. -.|.+||+.++++++++..+. ....+++. .++.++|+
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d------------~~i~v~d~~~~~~~~~~~~~~-------~v~~~~~s----pdg~~l~~ 90 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHS------------NDVSIIDTATNNVIATVPAGS-------SPQGVAVS----PDGKQVYV 90 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGG------------TEEEEEETTTTEEEEEEECSS-------SEEEEEEC----TTSSEEEE
T ss_pred cceEEECCCCCEEEEECCCC------------CeEEEEECCCCeEEEEEECCC-------CccceEEC----CCCCEEEE
Confidence 67888988886 55765432 359999999999999887743 34566775 35778999
Q ss_pred ecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCc
Q psy11539 321 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGT 400 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~ 400 (530)
+......|.+||+.+++..+.... ..++.+++++|++
T Consensus 91 ~~~~~~~v~v~d~~~~~~~~~~~~--------------------~~~~~~~~~s~dg----------------------- 127 (391)
T 1l0q_A 91 TNMASSTLSVIDTTSNTVAGTVKT--------------------GKSPLGLALSPDG----------------------- 127 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEEC--------------------SSSEEEEEECTTS-----------------------
T ss_pred EECCCCEEEEEECCCCeEEEEEeC--------------------CCCcceEEECCCC-----------------------
Confidence 998888999999999876543321 0134578888875
Q ss_pred cccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCC-cEEEEccCCCe
Q psy11539 401 NVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNG-VMFYNLVTKHS 479 (530)
Q Consensus 401 ~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G-~LYft~~~~~a 479 (530)
+.||+..-....++..+..-. . .+..+.. + ....+++++.+| .||++....+.
T Consensus 128 ----------~~l~~~~~~~~~v~~~d~~~~---~----------~~~~~~~-~--~~~~~~~~~~dg~~l~~~~~~~~~ 181 (391)
T 1l0q_A 128 ----------KKLYVTNNGDKTVSVINTVTK---A----------VINTVSV-G--RSPKGIAVTPDGTKVYVANFDSMS 181 (391)
T ss_dssp ----------SEEEEEETTTTEEEEEETTTT---E----------EEEEEEC-C--SSEEEEEECTTSSEEEEEETTTTE
T ss_pred ----------CEEEEEeCCCCEEEEEECCCC---c----------EEEEEec-C--CCcceEEECCCCCEEEEEeCCCCE
Confidence 677777666666776654211 1 1111111 1 235678888776 46778778889
Q ss_pred EEEEeCC
Q psy11539 480 VGCWNTK 486 (530)
Q Consensus 480 I~cWnt~ 486 (530)
|..||..
T Consensus 182 v~~~d~~ 188 (391)
T 1l0q_A 182 ISVIDTV 188 (391)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999998
No 82
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.25 E-value=0.00019 Score=70.40 Aligned_cols=194 Identities=15% Similarity=0.171 Sum_probs=122.6
Q ss_pred ceeeeEEe-CC-eEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCc-EEEEeC
Q psy11539 182 LPLGIGIW-RS-TIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIMDT 258 (530)
Q Consensus 182 iP~GV~v~-~g-RlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgR-LWVLDt 258 (530)
-+.++++. ++ ++|++--. +| +|..++..... .+.-++. .. .+..+.++.+|+ |++...
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~--d~---~i~v~d~~~~~---~~~~~~~---------~~--~v~~~~~spdg~~l~~~~~ 93 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAH--SN---DVSIIDTATNN---VIATVPA---------GS--SPQGVAVSPDGKQVYVTNM 93 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGG--GT---EEEEEETTTTE---EEEEEEC---------SS--SEEEEEECTTSSEEEEEET
T ss_pred CcceEEECCCCCEEEEECCC--CC---eEEEEECCCCe---EEEEEEC---------CC--CccceEECCCCCEEEEEEC
Confidence 36788886 44 57777422 22 67777754321 1211111 11 677888988776 778754
Q ss_pred CCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeE
Q psy11539 259 GVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 259 G~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~s 338 (530)
.. .+|.+||++++++++.+.... ....+++. .++.++|++......|.+||+.+++.
T Consensus 94 ~~------------~~v~v~d~~~~~~~~~~~~~~-------~~~~~~~s----~dg~~l~~~~~~~~~v~~~d~~~~~~ 150 (391)
T 1l0q_A 94 AS------------STLSVIDTTSNTVAGTVKTGK-------SPLGLALS----PDGKKLYVTNNGDKTVSVINTVTKAV 150 (391)
T ss_dssp TT------------TEEEEEETTTTEEEEEEECSS-------SEEEEEEC----TTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CC------------CEEEEEECCCCeEEEEEeCCC-------CcceEEEC----CCCCEEEEEeCCCCEEEEEECCCCcE
Confidence 32 359999999999988777532 24566665 35678999999889999999998866
Q ss_pred EEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeC
Q psy11539 339 YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSM 418 (530)
Q Consensus 339 wRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pl 418 (530)
.+.... ..++.+++++|++ +.||....
T Consensus 151 ~~~~~~--------------------~~~~~~~~~~~dg---------------------------------~~l~~~~~ 177 (391)
T 1l0q_A 151 INTVSV--------------------GRSPKGIAVTPDG---------------------------------TKVYVANF 177 (391)
T ss_dssp EEEEEC--------------------CSSEEEEEECTTS---------------------------------SEEEEEET
T ss_pred EEEEec--------------------CCCcceEEECCCC---------------------------------CEEEEEeC
Confidence 543311 0123467777775 67777766
Q ss_pred CCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCc-EEEEcc--CCCeEEEEeCC
Q psy11539 419 SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGV-MFYNLV--TKHSVGCWNTK 486 (530)
Q Consensus 419 sS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~-LYft~~--~~~aI~cWnt~ 486 (530)
....++.++..-. . .+..+... ....+++++.+|. ||++.. ..+.|.+||..
T Consensus 178 ~~~~v~~~d~~~~---~----------~~~~~~~~---~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 178 DSMSISVIDTVTN---S----------VIDTVKVE---AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp TTTEEEEEETTTT---E----------EEEEEECS---SEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred CCCEEEEEECCCC---e----------EEEEEecC---CCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 6666776653211 1 11122111 2356678887765 666654 67899999987
No 83
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.24 E-value=0.00028 Score=67.25 Aligned_cols=160 Identities=15% Similarity=0.087 Sum_probs=101.0
Q ss_pred EEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC
Q psy11539 245 MSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF 324 (530)
Q Consensus 245 v~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg 324 (530)
+.+...+++||...+. .+|.+||++++++++++.++.. .....++++ .++.++|++...
T Consensus 5 ~~~~~~~~~~v~~~~~------------~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~s----~dg~~~~v~~~~ 63 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYP------------NNLHVVDVASDTVYKSCVMPDK-----FGPGTAMMA----PDNRTAYVLNNH 63 (349)
T ss_dssp CCCCTTCEEEEEEETT------------TEEEEEETTTTEEEEEEECSSC-----CSSCEEEEC----TTSSEEEEEETT
T ss_pred ccccCCCEEEEEeCCC------------CeEEEEECCCCcEEEEEecCCC-----CCCceeEEC----CCCCEEEEEeCC
Confidence 3445677888887764 4599999999999999988541 124566775 245689999988
Q ss_pred CCeEEEEEccCCeEEE-EcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCcccc
Q psy11539 325 RYGLIVYDFFKNTSYR-LTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVD 403 (530)
Q Consensus 325 ~~gLIVyDl~~g~swR-v~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 403 (530)
...|.+||+.+++.-+ +.... .+. .. ...+.+++++|++
T Consensus 64 ~~~i~~~d~~t~~~~~~~~~~~---~~~--------~~---~~~~~~~~~spdg-------------------------- 103 (349)
T 1jmx_B 64 YGDIYGIDLDTCKNTFHANLSS---VPG--------EV---GRSMYSFAISPDG-------------------------- 103 (349)
T ss_dssp TTEEEEEETTTTEEEEEEESCC---STT--------EE---EECSSCEEECTTS--------------------------
T ss_pred CCcEEEEeCCCCcEEEEEEccc---ccc--------cc---cccccceEECCCC--------------------------
Confidence 8899999999986543 22111 000 00 0135678888876
Q ss_pred ccccCCCceEEEEeCC-----------CCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEE
Q psy11539 404 KTIRDDQRYMYFHSMS-----------SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFY 472 (530)
Q Consensus 404 ~~~~~~~r~LYf~pls-----------S~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYf 472 (530)
++||+..-. ...++.++.+-.+ ....+..... . .+..+++++.+|.||+
T Consensus 104 -------~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~----------~~~~~~~~~~-~--~~~~~~~~s~dg~l~~ 163 (349)
T 1jmx_B 104 -------KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL----------EAKPVRTFPM-P--RQVYLMRAADDGSLYV 163 (349)
T ss_dssp -------SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG----------GBCCSEEEEC-C--SSCCCEEECTTSCEEE
T ss_pred -------CEEEEEcccccccccccccCCCeEEEEECCCcc----------ccceeeeccC-C--CcccceeECCCCcEEE
Confidence 677776532 3456666543211 0111222211 1 2467788998999888
Q ss_pred EccCCCeEEEEeCCCC
Q psy11539 473 NLVTKHSVGCWNTKTK 488 (530)
Q Consensus 473 t~~~~~aI~cWnt~~~ 488 (530)
+. ..|.+||..++
T Consensus 164 ~~---~~i~~~d~~~~ 176 (349)
T 1jmx_B 164 AG---PDIYKMDVKTG 176 (349)
T ss_dssp ES---SSEEEECTTTC
T ss_pred cc---CcEEEEeCCCC
Confidence 53 34999998734
No 84
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.24 E-value=5.5e-05 Score=76.75 Aligned_cols=263 Identities=7% Similarity=-0.047 Sum_probs=138.6
Q ss_pred CceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCC----CcEEE
Q psy11539 181 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKC----DRLWI 255 (530)
Q Consensus 181 ~iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~c----gRLWV 255 (530)
.-|.++++. +|||||+-.. -.|..+. . .... .+.-.|- .+.++..+.+|.++++ ++|||
T Consensus 31 ~~P~~ia~~pdG~l~V~e~~------g~I~~i~-~-g~~~-~~~~~~v-------~~~g~~~p~gia~~pdf~~~g~lYv 94 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIAERP------GRIRLFR-E-GRLS-TYAELSV-------YHRGESGLLGLALHPRFPQEPYVYA 94 (352)
T ss_dssp SCEEEEEECTTSCEEEEETT------TEEEEEE-T-TEEE-EEEECCC-------CCSTTCSEEEEEECTTTTTSCEEEE
T ss_pred CCceEEEEcCCCeEEEEeCC------CeEEEEE-C-CCcc-EeecceE-------eecCCCCceeEEECCCCCCCCEEEE
Confidence 358999996 8999999632 3677776 2 1111 1111110 1244667899999987 89999
Q ss_pred EeCCCCCcccCccccCCCEEEEEECCCCcEEE---EE-ECCCcccccCccccceEEEeecCCCCeEEEEecCCC------
Q psy11539 256 MDTGVTNILSSIQQLCPPKIMVFDLKTNTLIR---KY-ILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR------ 325 (530)
Q Consensus 256 LDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~---~y-~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~------ 325 (530)
.+++..+ ....+|+.|++..+++-. .+ .+|.. .........|+++ .++++||++...
T Consensus 95 ~~~~~~~-------~~~~~v~r~~~~~~~~~~~~~l~~~~p~~-~~~~h~~~~l~~~-----pdG~Lyv~~G~~~~~~~~ 161 (352)
T 2ism_A 95 YRTVAEG-------GLRNQVVRLRHLGERGVLDRVVLDGIPAR-PHGLHSGGRIAFG-----PDGMLYVTTGEVYERELA 161 (352)
T ss_dssp EEEECTT-------SSEEEEEEEEECSSCEEEEEEEEEEECCC-TTCCCCCCCEEEC-----TTSCEEEECCCTTCGGGG
T ss_pred EEecCCC-------CCccEEEEEEeCCCCcCceEEEEEeCCCC-CCCCcCCceEEEC-----CCCCEEEEECCCCCCccc
Confidence 9986421 112579999997664321 11 24421 0122445789998 577999997421
Q ss_pred -------CeEEEEEccCCeEEEEc-CCCCCcCC--CcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccc
Q psy11539 326 -------YGLIVYDFFKNTSYRLT-HPYMYPEP--TQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVH 395 (530)
Q Consensus 326 -------~gLIVyDl~~g~swRv~-h~sf~pdP--~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~ 395 (530)
..|+.+|.... +- .+-|...+ ....+. .|. ....||+++|+.
T Consensus 162 ~d~~~~~g~I~ri~~dG~----~p~~npf~~~~~~~~~i~a-~G~-----rnp~g~a~d~~~------------------ 213 (352)
T 2ism_A 162 QDLASLGGKILRLTPEGE----PAPGNPFLGRRGARPEVYS-LGH-----RNPQGLAWHPKT------------------ 213 (352)
T ss_dssp GCTTCSSSEEEEECTTSS----BCTTCTTTTCTTSCTTEEE-ECC-----SEECCCEECTTT------------------
T ss_pred cCCCCCceEEEEEcCCCC----CCCCCcccCCCCCCccEEE-EcC-----CCcccEEEECCC------------------
Confidence 23444444320 00 01110000 000111 111 124688888743
Q ss_pred ccCCccccccccCCCceEEEEeCCCCe--------eEEEecchhcCcccc---C--CccccccceEEeccccCCCCCcce
Q psy11539 396 HYNGTNVDKTIRDDQRYMYFHSMSSNR--------HYYVSTTDLRNSSRY---V--NSSDIDEYFHYLGSRFKNTQASAS 462 (530)
Q Consensus 396 ~~~~~~~~~~~~~~~r~LYf~plsS~~--------lY~V~T~~Lrn~s~~---~--~~~~~~~~v~~lG~rG~~sqs~G~ 462 (530)
..||.+-..... +..|...- +-... . ........+..+. ....+.|+
T Consensus 214 ---------------g~l~v~d~g~~~~~~~~~dei~~i~~G~--nyGwp~~~g~~~~~~~~~p~~~~~---~~~ap~G~ 273 (352)
T 2ism_A 214 ---------------GELFSSEHGPSGEQGYGHDEVNLIVPGG--NYGWPRVVGRGNDPRYRDPLYFWP---QGFPPGNL 273 (352)
T ss_dssp ---------------CCEEEEEECC------CCCEEEEECTTC--BCCTTTCCSCCCCTTSCCCSEECT---TCCCEEEE
T ss_pred ---------------CCEEEEEcCCCCCCCCCCeEEEEeccCC--cCCCCcccCCCCCCCCcCCeEecC---CCCCCcce
Confidence 346665544443 44432210 00000 0 0000111222222 12357888
Q ss_pred EEcCCCcEEEEccCCCeEEEEeCCCCccc---cCceeEEeecCCceeecceeEEecCCcEEEEEee
Q psy11539 463 AINSNGVMFYNLVTKHSVGCWNTKTKVYL---PQTQDIVQTSRDILNFREEGEEEEEKENTCTFLV 525 (530)
Q Consensus 463 aiD~~G~LYft~~~~~aI~cWnt~~~~~~---~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~s 525 (530)
++ .+|.||+++...+.|.+.+.+ +.-. ......+.. .+..|.+++++.||.|||+...
T Consensus 274 ~~-~~G~l~v~~~~~~~v~~v~~~-~~~~~~~~~~~~~~~~---~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 274 AF-FRGDLYVAGLRGQALLRLVLE-GERGRWRVLRVETALS---GFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp EE-ETTEEEEEETTTTEEEEEEEE-EETTEEEEEEEEEEEE---SSCCEEEEEECTTSCEEEEECS
T ss_pred EE-ECCEEEEEECCCCEEEEEEEC-CCCcceeecchheecc---cCCCeeEEEECCCCcEEEEEeC
Confidence 88 678999999999999998876 3210 000111111 2346889999999999997653
No 85
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.14 E-value=0.00011 Score=69.70 Aligned_cols=202 Identities=8% Similarity=-0.006 Sum_probs=112.9
Q ss_pred EEEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEEECC---CCcEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 241 SVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLK---TNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 241 SV~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~---Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
.+..+.++.+|+ ||+.+.+. .+|.+||+. +.++++.+.. ......++++ .++.
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~------------~~i~~~d~~~~~~~~~~~~~~~-------~~~~~~~~~s----~dg~ 141 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNA------------GNVSVTRLEDGLPVGVVDVVEG-------LDGCHSANIS----PDNR 141 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTT------------TEEEEEEEETTEEEEEEEEECC-------CTTBCCCEEC----TTSS
T ss_pred CCcEEEEcCCCCEEEEEecCC------------CeEEEEECCCCccccccccccC-------CCCceEEEEC----CCCC
Confidence 456778888886 88887642 358999994 3344444332 2335677776 3567
Q ss_pred EEEEecCCCCeEEEEEccC-CeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccc
Q psy11539 317 FAYVNDVFRYGLIVYDFFK-NTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVH 395 (530)
Q Consensus 317 ~AYItDsg~~gLIVyDl~~-g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~ 395 (530)
++|+++.+...|.+||+.+ ++.-++... .+... ...++.+|+++|++
T Consensus 142 ~l~~~~~~~~~v~~~d~~~~~~~~~~~~~---------~~~~~-----~~~~~~~~~~~pdg------------------ 189 (343)
T 1ri6_A 142 TLWVPALKQDRICLFTVSDDGHLVAQDPA---------EVTTV-----EGAGPRHMVFHPNE------------------ 189 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCEEEEEEE---------EEECS-----TTCCEEEEEECTTS------------------
T ss_pred EEEEecCCCCEEEEEEecCCCceeeeccc---------ccccC-----CCCCcceEEECCCC------------------
Confidence 8999998888999999987 543322100 00000 00134468888876
Q ss_pred ccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccc-cCCCCCcceEEcCCC-cEEEE
Q psy11539 396 HYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSR-FKNTQASASAINSNG-VMFYN 473 (530)
Q Consensus 396 ~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~r-G~~sqs~G~aiD~~G-~LYft 473 (530)
++||+....+..+..++...- ...+ .....+..+... +....+.+++++.+| .||++
T Consensus 190 ---------------~~l~~~~~~~~~i~~~~~~~~-~g~~-----~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~ 248 (343)
T 1ri6_A 190 ---------------QYAYCVNELNSSVDVWELKDP-HGNI-----ECVQTLDMMPENFSDTRWAADIHITPDGRHLYAC 248 (343)
T ss_dssp ---------------SEEEEEETTTTEEEEEESSCT-TSCC-----EEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEE
T ss_pred ---------------CEEEEEeCCCCEEEEEEecCC-CCcE-----EEEeeccccCccccccCCccceEECCCCCEEEEE
Confidence 778887766666666654210 0000 001111111100 001234568999877 57778
Q ss_pred ccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCc-EEEE
Q psy11539 474 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKE-NTCT 522 (530)
Q Consensus 474 ~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~-lYv~ 522 (530)
....+.|..|+.. .. ......+..-... ..|.+++++.+|. ||+.
T Consensus 249 ~~~~~~i~v~d~~-~~--~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~ 294 (343)
T 1ri6_A 249 DRTASLITVFSVS-ED--GSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAA 294 (343)
T ss_dssp ETTTTEEEEEEEC-TT--SCCEEEEEEEECS-SSCCCEEECTTSSEEEEE
T ss_pred ecCCCEEEEEEEc-CC--CCceEEeeeecCC-CccceEEECCCCCEEEEe
Confidence 8788999999986 20 0012222211111 1277788877775 4443
No 86
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.14 E-value=0.00014 Score=76.89 Aligned_cols=129 Identities=16% Similarity=-0.011 Sum_probs=84.5
Q ss_pred eCCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCC-cEEEEeCCCCCcccCc
Q psy11539 189 WRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCD-RLWIMDTGVTNILSSI 267 (530)
Q Consensus 189 ~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cg-RLWVLDtG~~~~~~~~ 267 (530)
+..|+||+-..+.... .+|..|+..+.. .+.-.|- + ... ++.++.+| +|||.+++.....
T Consensus 83 ~~~~vyV~n~~~~~~~-~~VsVID~~t~~---vv~~I~v----------G-~~P-gia~SpDgk~lyVan~~~~~~~--- 143 (426)
T 3c75_H 83 DARRVYIQDPAHFAAI-TQQFVIDGSTGR---ILGMTDG----------G-FLP-HPVAAEDGSFFAQASTVFERIA--- 143 (426)
T ss_dssp CTTEEEEEECTTTCSS-EEEEEEETTTTE---EEEEEEE----------C-SSC-EEEECTTSSCEEEEEEEEEETT---
T ss_pred CCCEEEEECCCcCCCC-CeEEEEECCCCE---EEEEEEC----------C-CCC-ceEECCCCCEEEEEeccccccc---
Confidence 4689999987653212 589899875422 2211121 1 124 78898877 5999987421000
Q ss_pred cccCCCEEEEEECCCCcEEEEEECCC-cccccCccccceEEEeecCCCCeEEEEecCC-CCeEEEEEccCCeEEE
Q psy11539 268 QQLCPPKIMVFDLKTNTLIRKYILPT-AQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIVYDFFKNTSYR 340 (530)
Q Consensus 268 ~~~c~PKLvvfDL~Td~li~~y~~P~-~v~~~~S~lndIvVDv~~~c~~~~AYItDsg-~~gLIVyDl~~g~swR 340 (530)
.-.....|.+||+.|+++++++.++. .-...+.....++++ -++.++|+++.. ...|.|+|.++++.-+
T Consensus 144 ~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~s----pDGk~lyV~n~~~~~~VsVID~~t~kvv~ 214 (426)
T 3c75_H 144 RGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALT----PDNKNLLFYQFSPAPAVGVVDLEGKTFDR 214 (426)
T ss_dssp EEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEEC----TTSSEEEEEECSSSCEEEEEETTTTEEEE
T ss_pred cCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEc----CCCCEEEEEecCCCCeEEEEECCCCeEEE
Confidence 00012469999999999999999962 111113456789998 367899999875 6789999999997643
No 87
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.14 E-value=0.00025 Score=70.68 Aligned_cols=207 Identities=9% Similarity=-0.034 Sum_probs=129.2
Q ss_pred CCceeeeEEeC-CeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeC
Q psy11539 180 NNLPLGIGIWR-STIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDT 258 (530)
Q Consensus 180 n~iP~GV~v~~-gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDt 258 (530)
...|.|+++.. ++||++.-.+.. .+|.+|+..++. .+.-.|- ..-....++.+| .++||+++-
T Consensus 20 ~~f~~Gl~~~~dg~Lyvstg~~~~---s~v~~iD~~tg~---v~~~i~l---------~~~~fgeGi~~~-g~~lyv~t~ 83 (266)
T 2iwa_A 20 YAFTQGLVYAENDTLFESTGLYGR---SSVRQVALQTGK---VENIHKM---------DDSYFGEGLTLL-NEKLYQVVW 83 (266)
T ss_dssp TCCEEEEEECSTTEEEEEECSTTT---CEEEEEETTTCC---EEEEEEC---------CTTCCEEEEEEE-TTEEEEEET
T ss_pred CCCcccEEEeCCCeEEEECCCCCC---CEEEEEECCCCC---EEEEEec---------CCCcceEEEEEe-CCEEEEEEe
Confidence 34689999984 999999755322 489999976432 2221111 011223467777 469999986
Q ss_pred CCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeE
Q psy11539 259 GVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 259 G~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~s 338 (530)
.. -++.+||++|.++++++..+ ...+. .|.- ++..+|++| +...|.|+|.++.+.
T Consensus 84 ~~------------~~v~viD~~t~~v~~~i~~g---~~~g~---glt~------Dg~~l~vs~-gs~~l~viD~~t~~v 138 (266)
T 2iwa_A 84 LK------------NIGFIYDRRTLSNIKNFTHQ---MKDGW---GLAT------DGKILYGSD-GTSILYEIDPHTFKL 138 (266)
T ss_dssp TC------------SEEEEEETTTTEEEEEEECC---SSSCC---EEEE------CSSSEEEEC-SSSEEEEECTTTCCE
T ss_pred cC------------CEEEEEECCCCcEEEEEECC---CCCeE---EEEE------CCCEEEEEC-CCCeEEEEECCCCcE
Confidence 54 34999999999999998876 11221 1333 367899999 788999999998754
Q ss_pred EEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeC
Q psy11539 339 YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSM 418 (530)
Q Consensus 339 wRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pl 418 (530)
-+-.. ..-.|+++. .+++|+.. + ..||..-.
T Consensus 139 ~~~I~-----------Vg~~~~p~~---~~nele~~-d----------------------------------g~lyvn~~ 169 (266)
T 2iwa_A 139 IKKHN-----------VKYNGHRVI---RLNELEYI-N----------------------------------GEVWANIW 169 (266)
T ss_dssp EEEEE-----------CEETTEECC---CEEEEEEE-T----------------------------------TEEEEEET
T ss_pred EEEEE-----------ECCCCcccc---cceeEEEE-C----------------------------------CEEEEecC
Confidence 43211 001122221 12334332 1 36888877
Q ss_pred CCCeeEEEecchhcCccccCCccccccceEEecc--------ccCCCCCcceEEcCC-CcEEEEccCCCeEEEEeCC
Q psy11539 419 SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGS--------RFKNTQASASAINSN-GVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 419 sS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~--------rG~~sqs~G~aiD~~-G~LYft~~~~~aI~cWnt~ 486 (530)
.+..+.+|+++-.+.... +..-|- +.....+.|+++|.+ +.||++.-.-+.|...+..
T Consensus 170 ~~~~V~vID~~tg~V~~~----------I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 170 QTDCIARISAKDGTLLGW----------ILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp TSSEEEEEETTTCCEEEE----------EECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CCCeEEEEECCCCcEEEE----------EECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 888899998765443211 111010 111135789999955 5799998888888877765
No 88
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.12 E-value=0.00024 Score=69.34 Aligned_cols=190 Identities=7% Similarity=-0.062 Sum_probs=117.8
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.+..+.++..|+++|. +. ..|..||. +++++.+|..+.. ..+.++.+. .++..+|
T Consensus 38 ~~~~~~~~pdG~ilvs--~~------------~~V~~~d~-~G~~~W~~~~~~~-----~~~~~~~~~-----~dG~~lv 92 (276)
T 3no2_A 38 ECNSVAATKAGEILFS--YS------------KGAKMITR-DGRELWNIAAPAG-----CEMQTARIL-----PDGNALV 92 (276)
T ss_dssp CCCEEEECTTSCEEEE--CB------------SEEEEECT-TSCEEEEEECCTT-----CEEEEEEEC-----TTSCEEE
T ss_pred CCcCeEECCCCCEEEe--CC------------CCEEEECC-CCCEEEEEcCCCC-----ccccccEEC-----CCCCEEE
Confidence 3566778899999992 21 34999999 9999999998532 123344443 4678889
Q ss_pred ecCC-CCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCC
Q psy11539 321 NDVF-RYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNG 399 (530)
Q Consensus 321 tDsg-~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~ 399 (530)
++.+ ...|+.+|......|++.-..- +.+. +. ...+++..+++
T Consensus 93 ~~~~~~~~v~~vd~~Gk~l~~~~~~~~----------~~~~-~~---~~~~v~~~~~G---------------------- 136 (276)
T 3no2_A 93 AWCGHPSTILEVNMKGEVLSKTEFETG----------IERP-HA---QFRQINKNKKG---------------------- 136 (276)
T ss_dssp EEESTTEEEEEECTTSCEEEEEEECCS----------CSSG-GG---SCSCCEECTTS----------------------
T ss_pred EecCCCCEEEEEeCCCCEEEEEeccCC----------CCcc-cc---cccCceECCCC----------------------
Confidence 9888 7789999987666677542100 0000 00 11133443332
Q ss_pred ccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCe
Q psy11539 400 TNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHS 479 (530)
Q Consensus 400 ~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~a 479 (530)
+ +++......+++.++.+ .+.+-.++.. ..+.+...+.+|+++++....+.
T Consensus 137 -----------~-~lv~~~~~~~v~~~d~~--------------G~~~w~~~~~---~~~~~~~~~~~g~~~v~~~~~~~ 187 (276)
T 3no2_A 137 -----------N-YLVPLFATSEVREIAPN--------------GQLLNSVKLS---GTPFSSAFLDNGDCLVACGDAHC 187 (276)
T ss_dssp -----------C-EEEEETTTTEEEEECTT--------------SCEEEEEECS---SCCCEEEECTTSCEEEECBTTSE
T ss_pred -----------C-EEEEecCCCEEEEECCC--------------CCEEEEEECC---CCccceeEcCCCCEEEEeCCCCe
Confidence 3 33343444456555421 1112222211 24556788899999999998889
Q ss_pred EEEEeCCCCccccCceeEEeec---CCceeecceeEEecCCcEEEEEe
Q psy11539 480 VGCWNTKTKVYLPQTQDIVQTS---RDILNFREEGEEEEEKENTCTFL 524 (530)
Q Consensus 480 I~cWnt~~~~~~~~n~~lV~~d---~~~L~~Pd~l~Id~dG~lYv~~~ 524 (530)
|.++|++|+.+.- .+... ..+|.||.++.+..+|++||...
T Consensus 188 v~~~d~~tG~~~w----~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 188 FVQLNLESNRIVR----RVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEECTTTCCEEE----EEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEeCcCCcEEE----EecCCCCCCccccccccceEcCCCCEEEEec
Confidence 9999998554321 12211 22689999999999999999764
No 89
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.05 E-value=0.00051 Score=67.15 Aligned_cols=214 Identities=8% Similarity=-0.011 Sum_probs=112.3
Q ss_pred EEEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEE--ECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeE
Q psy11539 241 SVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVF--DLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 317 (530)
Q Consensus 241 SV~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvf--DL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~ 317 (530)
.+..+.++++|+ |++.+.... ....|.+| |..++++...-.++. .......+++| +.+
T Consensus 51 ~p~~l~~spdg~~l~~~~~~~~---------~~~~v~~~~~~~~~g~~~~~~~~~~----~~~~p~~~~~d------g~~ 111 (361)
T 3scy_A 51 NPSYLIPSADGKFVYSVNEFSK---------DQAAVSAFAFDKEKGTLHLLNTQKT----MGADPCYLTTN------GKN 111 (361)
T ss_dssp CCCSEEECTTSSEEEEEECCSS---------TTCEEEEEEEETTTTEEEEEEEEEC----SSSCEEEEEEC------SSE
T ss_pred CCceEEECCCCCEEEEEEccCC---------CCCcEEEEEEeCCCCcEEEeeEecc----CCCCcEEEEEC------CCE
Confidence 344567788776 777766310 11235555 444566544333322 12234455554 679
Q ss_pred EEEecCCCCeEEEEEccCCeEEE-Ec----CCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccc
Q psy11539 318 AYVNDVFRYGLIVYDFFKNTSYR-LT----HPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHY 392 (530)
Q Consensus 318 AYItDsg~~gLIVyDl~~g~swR-v~----h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~ 392 (530)
+|+++.....|.+|++..+...+ +. +.-..+.|.. +....+.+++++|++
T Consensus 112 l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~----------~~~~~~~~~~~spdg--------------- 166 (361)
T 3scy_A 112 IVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKER----------QTMPHLHCVRITPDG--------------- 166 (361)
T ss_dssp EEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTT----------CSSCCEEEEEECTTS---------------
T ss_pred EEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccc----------cCCCcceEEEECCCC---------------
Confidence 99999988899999997543221 10 1100111100 001123457777765
Q ss_pred cccccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCc---c-ccCCccccccceEEeccccCCCCCcceEEcCCC
Q psy11539 393 NVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNS---S-RYVNSSDIDEYFHYLGSRFKNTQASASAINSNG 468 (530)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~---s-~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G 468 (530)
++||+.......++......-... . +.. .-......+ ..+ ..+.+++++.+|
T Consensus 167 ------------------~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~---~~~~~~~~~-~~~--~~~~~~~~spdg 222 (361)
T 3scy_A 167 ------------------KYLLADDLGTDQIHKFNINPNANADNKEKFLT---KGTPEAFKV-APG--SGPRHLIFNSDG 222 (361)
T ss_dssp ------------------SEEEEEETTTTEEEEEEECTTCCTTTCCCCEE---EEEEEEEEC-CTT--CCEEEEEECTTS
T ss_pred ------------------CEEEEEeCCCCEEEEEEEcCCCCcccccceee---cccccceec-CCC--CCCeEEEEcCCC
Confidence 789988876665554432211000 0 100 000001111 111 346688999888
Q ss_pred c-EEEEccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCc-EEEEEe
Q psy11539 469 V-MFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKE-NTCTFL 524 (530)
Q Consensus 469 ~-LYft~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~-lYv~~~ 524 (530)
. ||++....+.|..|+.+++.+.. ...+.........|.+++++.||. ||+...
T Consensus 223 ~~l~v~~~~~~~v~v~~~~~g~~~~--~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~ 278 (361)
T 3scy_A 223 KFAYLINEIGGTVIAFRYADGMLDE--IQTVAADTVNAQGSGDIHLSPDGKYLYASNR 278 (361)
T ss_dssp SEEEEEETTTCEEEEEEEETTEEEE--EEEEESCSSCCCCEEEEEECTTSSEEEEEEC
T ss_pred CEEEEEcCCCCeEEEEEecCCceEE--eEEEecCCCCCCCcccEEECCCCCEEEEECC
Confidence 6 88888788999999986343321 122222233345567888888885 665443
No 90
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.98 E-value=0.001 Score=62.84 Aligned_cols=82 Identities=11% Similarity=-0.001 Sum_probs=58.5
Q ss_pred EEEEEEeCCC-cEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 242 VFRMSVDKCD-RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 242 V~rv~ID~cg-RLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
+..+.++++| +|||.+.+. .+|.+||+.++++++++.++..-. .......++++ .++.++|+
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~------------~~v~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~s----~dg~~l~~ 98 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKS------------ESLVKIDLVTGETLGRIDLSTPEE-RVKSLFGAALS----PDGKTLAI 98 (337)
T ss_dssp CCCEEECTTSSEEEEEETTT------------TEEEEEETTTCCEEEEEECCBTTE-EEECTTCEEEC----TTSSEEEE
T ss_pred ccceEEcCCCCEEEEEeCCC------------CeEEEEECCCCCeEeeEEcCCccc-ccccccceEEC----CCCCEEEE
Confidence 4567888887 588887643 359999999999999988854100 11235677876 34569999
Q ss_pred ecC-----------CCCeEEEEEccCCeEEE
Q psy11539 321 NDV-----------FRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 321 tDs-----------g~~gLIVyDl~~g~swR 340 (530)
++. ....|.+||..+++.-+
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 129 (337)
T 1pby_B 99 YESPVRLELTHFEVQPTRVALYDAETLSRRK 129 (337)
T ss_dssp EEEEEEECSSCEEECCCEEEEEETTTTEEEE
T ss_pred EecccccccccccccCceEEEEECCCCcEEE
Confidence 963 24789999999886544
No 91
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.96 E-value=0.0014 Score=61.92 Aligned_cols=130 Identities=15% Similarity=0.094 Sum_probs=79.3
Q ss_pred eeeeEEe-CC-eEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCC-cEEEEeCC
Q psy11539 183 PLGIGIW-RS-TIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCD-RLWIMDTG 259 (530)
Q Consensus 183 P~GV~v~-~g-RlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cg-RLWVLDtG 259 (530)
|.++++. ++ ++|++... ..+|..++..... .+.-++.-..+ ..-..+..+.++++| +||+.+.|
T Consensus 36 ~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~---~~~~~~~~~~~-----~~~~~~~~~~~s~dg~~l~~~~~~ 102 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGE---TLGRIDLSTPE-----ERVKSLFGAALSPDGKTLAIYESP 102 (337)
T ss_dssp CCCEEECTTSSEEEEEETT-----TTEEEEEETTTCC---EEEEEECCBTT-----EEEECTTCEEECTTSSEEEEEEEE
T ss_pred ccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCC---eEeeEEcCCcc-----cccccccceEECCCCCEEEEEecc
Confidence 7888886 55 68888533 2368888764322 22111110000 001134567888877 78998754
Q ss_pred CCCcccCcccc--CCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCe
Q psy11539 260 VTNILSSIQQL--CPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT 337 (530)
Q Consensus 260 ~~~~~~~~~~~--c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~ 337 (530)
.... +... ....|.+||++++++++.+..+. ....++++ .++.++|+++ ..|.+||+++++
T Consensus 103 ~~~~---~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-------~~~~~~~s----~dg~~l~~~~---~~i~~~d~~~~~ 165 (337)
T 1pby_B 103 VRLE---LTHFEVQPTRVALYDAETLSRRKAFEAPR-------QITMLAWA----RDGSKLYGLG---RDLHVMDPEAGT 165 (337)
T ss_dssp EEEC---SSCEEECCCEEEEEETTTTEEEEEEECCS-------SCCCEEEC----TTSSCEEEES---SSEEEEETTTTE
T ss_pred cccc---cccccccCceEEEEECCCCcEEEEEeCCC-------CcceeEEC----CCCCEEEEeC---CeEEEEECCCCc
Confidence 2100 0001 34679999999999998877632 24567765 3567899994 579999999998
Q ss_pred EEEEc
Q psy11539 338 SYRLT 342 (530)
Q Consensus 338 swRv~ 342 (530)
..+..
T Consensus 166 ~~~~~ 170 (337)
T 1pby_B 166 LVEDK 170 (337)
T ss_dssp EEEEE
T ss_pred Eeeee
Confidence 76543
No 92
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.95 E-value=0.0011 Score=64.60 Aligned_cols=183 Identities=10% Similarity=0.051 Sum_probs=108.4
Q ss_pred CcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEE
Q psy11539 251 DRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIV 330 (530)
Q Consensus 251 gRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIV 330 (530)
|++-|.+.+. ..|.+||.+||+++.++..+.. ....++.+. .++.+|++ ...+|.+
T Consensus 5 ~~~lv~~~~~------------~~v~~~d~~tG~~~w~~~~~~~-----~~~~~~~~~-----pdG~ilvs--~~~~V~~ 60 (276)
T 3no2_A 5 QHLLVGGSGW------------NKIAIINKDTKEIVWEYPLEKG-----WECNSVAAT-----KAGEILFS--YSKGAKM 60 (276)
T ss_dssp CEEEEECTTC------------SEEEEEETTTTEEEEEEECCTT-----CCCCEEEEC-----TTSCEEEE--CBSEEEE
T ss_pred CcEEEeeCCC------------CEEEEEECCCCeEEEEeCCCcc-----CCCcCeEEC-----CCCCEEEe--CCCCEEE
Confidence 5666666654 4599999999999999887431 234666765 45667774 4678999
Q ss_pred EEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCC
Q psy11539 331 YDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQ 410 (530)
Q Consensus 331 yDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~ 410 (530)
||......|++... +. . .+.+.+..+++
T Consensus 61 ~d~~G~~~W~~~~~----~~----~-----------~~~~~~~~~dG--------------------------------- 88 (276)
T 3no2_A 61 ITRDGRELWNIAAP----AG----C-----------EMQTARILPDG--------------------------------- 88 (276)
T ss_dssp ECTTSCEEEEEECC----TT----C-----------EEEEEEECTTS---------------------------------
T ss_pred ECCCCCEEEEEcCC----CC----c-----------cccccEECCCC---------------------------------
Confidence 99976677887642 00 0 01133344443
Q ss_pred ceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEecc-ccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCc
Q psy11539 411 RYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGS-RFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKV 489 (530)
Q Consensus 411 r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~-rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~ 489 (530)
+.|+-..-...+++.++. +. +....+..-+. .+......++..+.+|++++++...+.|.|||.+ +.
T Consensus 89 ~~lv~~~~~~~~v~~vd~----~G-------k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~ 156 (276)
T 3no2_A 89 NALVAWCGHPSTILEVNM----KG-------EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQ 156 (276)
T ss_dssp CEEEEEESTTEEEEEECT----TS-------CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SC
T ss_pred CEEEEecCCCCEEEEEeC----CC-------CEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CC
Confidence 222221111223444421 11 11111221111 1112346677889999999999999999999998 75
Q ss_pred cccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 490 YLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 490 ~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
..- ... .. .+|-+..+..+|+++|....+.+|
T Consensus 157 ~~w----~~~--~~--~~~~~~~~~~~g~~~v~~~~~~~v 188 (276)
T 3no2_A 157 LLN----SVK--LS--GTPFSSAFLDNGDCLVACGDAHCF 188 (276)
T ss_dssp EEE----EEE--CS--SCCCEEEECTTSCEEEECBTTSEE
T ss_pred EEE----EEE--CC--CCccceeEcCCCCEEEEeCCCCeE
Confidence 421 111 11 367778888889988877766443
No 93
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.95 E-value=0.00023 Score=72.26 Aligned_cols=84 Identities=7% Similarity=-0.037 Sum_probs=53.9
Q ss_pred CceEEEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEE-ECCCcccccCccccceEEEeecCCCC
Q psy11539 238 SLISVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKY-ILPTAQVFEGSLFSNIVTEVVEDCDH 315 (530)
Q Consensus 238 ~LvSV~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y-~~P~~v~~~~S~lndIvVDv~~~c~~ 315 (530)
+|..+.+|.+|+.|| |||.+.+ -+|.++|. .+++...+ .+|.-.......+.+|+++..-. .+
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~e~~-------------G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~-~~ 80 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLITLRG-------------GELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFA-QS 80 (353)
T ss_dssp EESSEEEEEECSTTCCEEEEETT-------------TEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHH-HH
T ss_pred CCCCcEEEEEcCCCCEEEEEeCC-------------ceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCC-CC
Confidence 477888999999999 9999973 25888886 34432111 23322222345678899972100 16
Q ss_pred eEEEEecCC-------CCeEEEEEccCC
Q psy11539 316 VFAYVNDVF-------RYGLIVYDFFKN 336 (530)
Q Consensus 316 ~~AYItDsg-------~~gLIVyDl~~g 336 (530)
+++|++++. ...|..|++..+
T Consensus 81 g~lYv~~~~~~~~g~~~~~v~r~~~~~~ 108 (353)
T 2g8s_A 81 RRIWLSYSEVGDDGKAGTAVGYGRLSDD 108 (353)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEECTT
T ss_pred CEEEEEEeCCCCCCCceeEEEEEEECCC
Confidence 899999875 345777776544
No 94
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.91 E-value=0.00026 Score=71.07 Aligned_cols=151 Identities=13% Similarity=0.077 Sum_probs=96.9
Q ss_pred cCCCceeeeEEeCCeEEEEccCCCCCCCcEEEEEECCCCCCCCcc--CCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEE
Q psy11539 178 PENNLPLGIGIWRSTIFLSFPKWKAGIPFTLASFNMNDPSESPIL--LPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWI 255 (530)
Q Consensus 178 p~n~iP~GV~v~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L--~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWV 255 (530)
+......|+++..+|||+.. |+.+ ++-.++..+.. .+ .||+...| ++.-| .++||+
T Consensus 93 ~~~~FgeGit~~g~~Ly~lt--w~~~---~v~V~D~~Tl~---~~~ti~~~~eGw-------------GLt~D-g~~L~v 150 (268)
T 3nok_A 93 LGNIFAEGLASDGERLYQLT--WTEG---LLFTWSGMPPQ---RERTTRYSGEGW-------------GLCYW-NGKLVR 150 (268)
T ss_dssp CTTCCEEEEEECSSCEEEEE--SSSC---EEEEEETTTTE---EEEEEECSSCCC-------------CEEEE-TTEEEE
T ss_pred CCCcceeEEEEeCCEEEEEE--ccCC---EEEEEECCcCc---EEEEEeCCCcee-------------EEecC-CCEEEE
Confidence 34455678999999999995 7665 67777764322 22 24442211 22345 479999
Q ss_pred EeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccC
Q psy11539 256 MDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFK 335 (530)
Q Consensus 256 LDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~ 335 (530)
.| |. .+|.++|.+|.++++++..... -.+-.++|.|... ++.+|++.-....|.|.|.++
T Consensus 151 Sd-Gs------------~~l~~iDp~T~~v~~~I~V~~~-g~~v~~lNeLe~~------dG~lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 151 SD-GG------------TMLTFHEPDGFALVGAVQVKLR-GQPVELINELECA------NGVIYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp EC-SS------------SEEEEECTTTCCEEEEEECEET-TEECCCEEEEEEE------TTEEEEEETTCSEEEEECTTT
T ss_pred EC-CC------------CEEEEEcCCCCeEEEEEEeCCC-CcccccccccEEe------CCEEEEEECCCCeEEEEeCCC
Confidence 99 63 3699999999999999988442 1223456665554 568999998889999999999
Q ss_pred CeEEEEcCCC-CCcCCCcceeeecCeEeeecCCccceecCCCc
Q psy11539 336 NTSYRLTHPY-MYPEPTQSTYILDNLKFRWVDGIFGMAISPEL 377 (530)
Q Consensus 336 g~swRv~h~s-f~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~ 377 (530)
|+--+...-. ..++... +.....+.++|||++|++
T Consensus 211 G~V~~~Idl~~L~~~~~~-------~~~~~~~vlNGIA~dp~~ 246 (268)
T 3nok_A 211 GTVVGVIDASALTRAVAG-------QVTNPEAVLNGIAVEPGS 246 (268)
T ss_dssp CBEEEEEECHHHHHHHTT-------TCCCTTCCEEEEEECTTT
T ss_pred CcEEEEEECCCCcccccc-------cccCcCCceEEEEEcCCC
Confidence 9765544211 1110000 000112457899999875
No 95
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.88 E-value=0.00035 Score=69.88 Aligned_cols=166 Identities=15% Similarity=0.155 Sum_probs=109.0
Q ss_pred CCCceeeeEEeCCeEEEEccCCCCCCCcEEEEEECCCCCCCCcc--CCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEE
Q psy11539 179 ENNLPLGIGIWRSTIFLSFPKWKAGIPFTLASFNMNDPSESPIL--LPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIM 256 (530)
Q Consensus 179 ~n~iP~GV~v~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L--~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVL 256 (530)
......|+++.++|||+.. |+.+ ++..++..+.. .+ .||+...| +|. -| .++||+-
T Consensus 85 ~~~FgeGit~~g~~ly~lt--w~~~---~v~v~D~~t~~---~~~ti~~~~eG~-------glt------~d-g~~L~~S 142 (262)
T 3nol_A 85 KRYFGEGISDWKDKIVGLT--WKNG---LGFVWNIRNLR---QVRSFNYDGEGW-------GLT------HN-DQYLIMS 142 (262)
T ss_dssp TTCCEEEEEEETTEEEEEE--SSSS---EEEEEETTTCC---EEEEEECSSCCC-------CEE------EC-SSCEEEC
T ss_pred CccceeEEEEeCCEEEEEE--eeCC---EEEEEECccCc---EEEEEECCCCce-------EEe------cC-CCEEEEE
Confidence 3445678999999999995 6665 67778765322 22 24443222 222 34 4799999
Q ss_pred eCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCC
Q psy11539 257 DTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKN 336 (530)
Q Consensus 257 DtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g 336 (530)
| |. .+|.++|.+|.++++++....+ -.+-..+|.+... ++.+|+..-....|.|.|.++|
T Consensus 143 d-Gs------------~~i~~iDp~T~~v~~~I~V~~~-g~~~~~lNELe~~------~G~lyan~w~~~~I~vIDp~tG 202 (262)
T 3nol_A 143 D-GT------------PVLRFLDPESLTPVRTITVTAH-GEELPELNELEWV------DGEIFANVWQTNKIVRIDPETG 202 (262)
T ss_dssp C-SS------------SEEEEECTTTCSEEEEEECEET-TEECCCEEEEEEE------TTEEEEEETTSSEEEEECTTTC
T ss_pred C-CC------------CeEEEEcCCCCeEEEEEEeccC-CccccccceeEEE------CCEEEEEEccCCeEEEEECCCC
Confidence 8 53 3599999999999999988431 1122456665554 5789999988899999999999
Q ss_pred eEEEEcC-CCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEE
Q psy11539 337 TSYRLTH-PYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYF 415 (530)
Q Consensus 337 ~swRv~h-~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf 415 (530)
+.-+... ....++.. . .....+.++|||++|+. +.||.
T Consensus 203 ~V~~~Id~~~L~~~~~--~------~~~~~~vlNGIA~dp~~---------------------------------~~lfV 241 (262)
T 3nol_A 203 KVTGIIDLNGILAEAG--P------LPSPIDVLNGIAWDKEH---------------------------------HRLFV 241 (262)
T ss_dssp BEEEEEECTTGGGGSC--S------CCSSCCCEEEEEEETTT---------------------------------TEEEE
T ss_pred cEEEEEECCcCccccc--c------ccCcCCceEEEEEcCCC---------------------------------CEEEE
Confidence 8765442 21222110 0 00112467899999875 56776
Q ss_pred EeCCCCeeEEEe
Q psy11539 416 HSMSSNRHYYVS 427 (530)
Q Consensus 416 ~plsS~~lY~V~ 427 (530)
+-=-=.++|.|.
T Consensus 242 TGK~Wp~~~ev~ 253 (262)
T 3nol_A 242 TGKLWPKVFEIT 253 (262)
T ss_dssp EETTCSEEEEEE
T ss_pred ECCCCCceEEEE
Confidence 666667788776
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.86 E-value=0.0004 Score=68.99 Aligned_cols=157 Identities=10% Similarity=0.037 Sum_probs=97.4
Q ss_pred EEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecC
Q psy11539 244 RMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV 323 (530)
Q Consensus 244 rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs 323 (530)
.+.+++.++|++..... -+|.+||+.++++++.+..+. ..........+++. .++.+|++..
T Consensus 127 ~~~~s~~~~~~~~~~~~------------~~i~~~d~~~g~~~~~~~~~~-~~~~~~~v~~~~~~-----~~~~~~~s~~ 188 (433)
T 3bws_A 127 SVRFIDNTRLAIPLLED------------EGMDVLDINSGQTVRLSPPEK-YKKKLGFVETISIP-----EHNELWVSQM 188 (433)
T ss_dssp CCEESSSSEEEEEBTTS------------SSEEEEETTTCCEEEECCCHH-HHTTCCEEEEEEEG-----GGTEEEEEEG
T ss_pred EEEEeCCCeEEEEeCCC------------CeEEEEECCCCeEeeecCccc-ccccCCceeEEEEc-----CCCEEEEEEC
Confidence 55666677787775432 239999999999886544311 11122345566664 4678899998
Q ss_pred CCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCcccc
Q psy11539 324 FRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVD 403 (530)
Q Consensus 324 g~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 403 (530)
....|.+||+++++..+.... .+ ..+.+++++|++
T Consensus 189 ~d~~v~~~d~~~~~~~~~~~~-------------~~------~~~~~~~~~~~~-------------------------- 223 (433)
T 3bws_A 189 QANAVHVFDLKTLAYKATVDL-------------TG------KWSKILLYDPIR-------------------------- 223 (433)
T ss_dssp GGTEEEEEETTTCCEEEEEEC-------------SS------SSEEEEEEETTT--------------------------
T ss_pred CCCEEEEEECCCceEEEEEcC-------------CC------CCeeEEEEcCCC--------------------------
Confidence 889999999998765443210 00 123467777765
Q ss_pred ccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCC-cEEEEcc-------
Q psy11539 404 KTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNG-VMFYNLV------- 475 (530)
Q Consensus 404 ~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G-~LYft~~------- 475 (530)
+.||........++.++.+.- . .+..+... ....+++++.+| .||++..
T Consensus 224 -------~~l~~~~~~~~~i~~~d~~~~---~----------~~~~~~~~---~~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 224 -------DLVYCSNWISEDISVIDRKTK---L----------EIRKTDKI---GLPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp -------TEEEEEETTTTEEEEEETTTT---E----------EEEECCCC---SEEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred -------CEEEEEecCCCcEEEEECCCC---c----------EEEEecCC---CCceEEEEcCCCCEEEEEECCCCcccc
Confidence 677777766666776664211 0 11122111 236778888777 5666654
Q ss_pred CCCeEEEEeCC
Q psy11539 476 TKHSVGCWNTK 486 (530)
Q Consensus 476 ~~~aI~cWnt~ 486 (530)
..+.|.+||..
T Consensus 281 ~dg~i~~~d~~ 291 (433)
T 3bws_A 281 GGGRLGIYSMD 291 (433)
T ss_dssp CCEEEEEEETT
T ss_pred CCCeEEEEECC
Confidence 45689999987
No 97
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.84 E-value=0.0017 Score=69.68 Aligned_cols=202 Identities=11% Similarity=0.107 Sum_probs=127.7
Q ss_pred CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCC-cEEEEeCCCCCcccCcc
Q psy11539 190 RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCD-RLWIMDTGVTNILSSIQ 268 (530)
Q Consensus 190 ~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cg-RLWVLDtG~~~~~~~~~ 268 (530)
++++||+--. . .+|..++..... .+.-++. +. .+..+.++.+| +|++.+.+
T Consensus 148 ~~~~~vs~~~--d---~~V~v~D~~t~~---~~~~i~~----------g~-~~~~v~~spdg~~l~v~~~d--------- 199 (543)
T 1nir_A 148 PNLFSVTLRD--A---GQIALVDGDSKK---IVKVIDT----------GY-AVHISRMSASGRYLLVIGRD--------- 199 (543)
T ss_dssp GGEEEEEEGG--G---TEEEEEETTTCC---EEEEEEC----------ST-TEEEEEECTTSCEEEEEETT---------
T ss_pred CCEEEEEEcC--C---CeEEEEECCCce---EEEEEec----------Cc-ccceEEECCCCCEEEEECCC---------
Confidence 6788888422 2 378888764322 2222221 11 17788899887 48888765
Q ss_pred ccCCCEEEEEEC--CCCcEEEEEECCCcccccCccccceEEEeecCC----CCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 269 QLCPPKIMVFDL--KTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDC----DHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 269 ~~c~PKLvvfDL--~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c----~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
-+|.+||+ +|+++++++.. +.....++++ . ++.++|+++...+.|.|||..+++.-+..
T Consensus 200 ----~~V~v~D~~~~t~~~~~~i~~-------g~~p~~va~s----p~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i 264 (543)
T 1nir_A 200 ----ARIDMIDLWAKEPTKVAEIKI-------GIEARSVESS----KFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIV 264 (543)
T ss_dssp ----SEEEEEETTSSSCEEEEEEEC-------CSEEEEEEEC----CSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEE
T ss_pred ----CeEEEEECcCCCCcEEEEEec-------CCCcceEEeC----CCcCCCCCEEEEEEccCCeEEEEeccccccceee
Confidence 23999999 89999887764 2335667776 3 57899999988899999999998766543
Q ss_pred CCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeCCCCe
Q psy11539 343 HPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNR 422 (530)
Q Consensus 343 h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~ 422 (530)
.-. ...++++.|.-...+.+|++++++ +.+|+.-..+.+
T Consensus 265 ~~~--------g~~~~~~~~~~~~~v~~i~~s~~~---------------------------------~~~~vs~~~~g~ 303 (543)
T 1nir_A 265 STR--------GMTVDTQTYHPEPRVAAIIASHEH---------------------------------PEFIVNVKETGK 303 (543)
T ss_dssp ECC--------EECSSSCCEESCCCEEEEEECSSS---------------------------------SEEEEEETTTTE
T ss_pred ccc--------CcccCccccccCCceEEEEECCCC---------------------------------CEEEEEECCCCe
Confidence 210 001111112111134467777765 567777766777
Q ss_pred eEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCc-EEEEccCCCeEEEEeCCCCc
Q psy11539 423 HYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGV-MFYNLVTKHSVGCWNTKTKV 489 (530)
Q Consensus 423 lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~-LYft~~~~~aI~cWnt~~~~ 489 (530)
+..++++..+.. .+..++. + ..+.++++|.+|. ||++.-..+.|..||+.++.
T Consensus 304 i~vvd~~~~~~l-----------~~~~i~~-~--~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~ 357 (543)
T 1nir_A 304 VLLVNYKDIDNL-----------TVTSIGA-A--PFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRR 357 (543)
T ss_dssp EEEEECTTSSSC-----------EEEEEEC-C--SSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTE
T ss_pred EEEEEecCCCcc-----------eeEEecc-C--cCccCceECCCCCEEEEEecCCCeEEEEECCCCe
Confidence 888876543211 1112221 2 2477889999988 56677778899999998443
No 98
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.84 E-value=0.001 Score=63.48 Aligned_cols=209 Identities=10% Similarity=0.066 Sum_probs=121.5
Q ss_pred eEEeCCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEEeCCCCCccc
Q psy11539 186 IGIWRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVTNILS 265 (530)
Q Consensus 186 V~v~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVLDtG~~~~~~ 265 (530)
..+.+++|++..- . ..|..++.. +. .+ |..... .. .+..+.+|..|+|||...+
T Consensus 103 ~~~~~~~l~v~t~---~---~~l~~~d~~-g~---~~-----~~~~~~--~~---~~~~~~~~~~g~l~vgt~~------ 156 (330)
T 3hxj_A 103 FTIFEDILYVTSM---D---GHLYAINTD-GT---EK-----WRFKTK--KA---IYATPIVSEDGTIYVGSND------ 156 (330)
T ss_dssp EEEETTEEEEECT---T---SEEEEECTT-SC---EE-----EEEECS--SC---CCSCCEECTTSCEEEECTT------
T ss_pred ceEECCEEEEEec---C---CEEEEEcCC-CC---EE-----EEEcCC--Cc---eeeeeEEcCCCEEEEEcCC------
Confidence 3445899999852 1 257667643 11 11 211111 11 1334467889999996432
Q ss_pred CccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEcCCC
Q psy11539 266 SIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPY 345 (530)
Q Consensus 266 ~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~h~s 345 (530)
-.|++||.+ ++++.++.++. .....+.+| .++.+||+. .+|.+||......|+.....
T Consensus 157 -------~~l~~~d~~-g~~~~~~~~~~------~~~~~~~~d-----~~g~l~v~t---~~l~~~d~~g~~~~~~~~~~ 214 (330)
T 3hxj_A 157 -------NYLYAINPD-GTEKWRFKTND------AITSAASIG-----KDGTIYFGS---DKVYAINPDGTEKWNFYAGY 214 (330)
T ss_dssp -------SEEEEECTT-SCEEEEEECSS------CCCSCCEEC-----TTCCEEEES---SSEEEECTTSCEEEEECCSS
T ss_pred -------CEEEEECCC-CCEeEEEecCC------CceeeeEEc-----CCCEEEEEe---CEEEEECCCCcEEEEEccCC
Confidence 249999998 89888888743 345667787 578899998 79999995445667654211
Q ss_pred CCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeCCCCeeEE
Q psy11539 346 MYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYY 425 (530)
Q Consensus 346 f~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~lY~ 425 (530)
..+.+++++++ ..||+....+ .+++
T Consensus 215 --------------------~~~~~~~~~~~----------------------------------g~l~v~t~~~-gl~~ 239 (330)
T 3hxj_A 215 --------------------WTVTRPAISED----------------------------------GTIYVTSLDG-HLYA 239 (330)
T ss_dssp --------------------CCCSCCEECTT----------------------------------SCEEEEETTT-EEEE
T ss_pred --------------------cceeceEECCC----------------------------------CeEEEEcCCC-eEEE
Confidence 01234444443 2566655433 4666
Q ss_pred EecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccccCceeEEeecCCce
Q psy11539 426 VSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDIL 505 (530)
Q Consensus 426 V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L 505 (530)
++. +.. .+..+...+ .....+++|.+|.||++.. .+.|.|+|++ +.... .... . -
T Consensus 240 ~~~----~g~----------~~~~~~~~~--~~~~~~~~~~~g~l~v~t~-~ggl~~~d~~-g~~~~----~~~~-~--~ 294 (330)
T 3hxj_A 240 INP----DGT----------EKWRFKTGK--RIESSPVIGNTDTIYFGSY-DGHLYAINPD-GTEKW----NFET-G--S 294 (330)
T ss_dssp ECT----TSC----------EEEEEECSS--CCCSCCEECTTSCEEEECT-TCEEEEECTT-SCEEE----EEEC-S--S
T ss_pred ECC----CCC----------EeEEeeCCC--CccccceEcCCCeEEEecC-CCCEEEECCC-CcEEE----EEEc-C--C
Confidence 631 110 011111111 1234578898999999875 4589999986 54311 1111 1 1
Q ss_pred eecceeEEecCCcEEEE
Q psy11539 506 NFREEGEEEEEKENTCT 522 (530)
Q Consensus 506 ~~Pd~l~Id~dG~lYv~ 522 (530)
.....+.+|.+|.||+.
T Consensus 295 ~~~~~~~~d~~g~l~~g 311 (330)
T 3hxj_A 295 WIIATPVIDENGTIYFG 311 (330)
T ss_dssp CCCSCCEECTTCCEEEE
T ss_pred ccccceEEcCCCEEEEE
Confidence 23456778889998883
No 99
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.77 E-value=0.0035 Score=64.67 Aligned_cols=227 Identities=10% Similarity=0.022 Sum_probs=122.8
Q ss_pred CCceEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 237 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 237 ~~LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
++|..+-+|.++.+|+|||.+... -+|++++..+++......+|.-.......+.+|+++..- -.++
T Consensus 29 ~gL~~P~~ia~~pdG~llVter~~------------G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf-~~~g 95 (347)
T 3das_A 29 TGLNSPWGLAPLPGGDLLVSSRDE------------ATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDY-ASDH 95 (347)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTT------------CEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTH-HHHC
T ss_pred cCCCCceEEEEcCCCcEEEEEecC------------CEEEEEECCCCcEeeecccCceeecCCCCceeeEecccc-ccCC
Confidence 578899999999999999998632 248888887776544445654334456788999997210 0157
Q ss_pred EEEEecC--CCCeEEEEEccCCeE--EEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccc
Q psy11539 317 FAYVNDV--FRYGLIVYDFFKNTS--YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHY 392 (530)
Q Consensus 317 ~AYItDs--g~~gLIVyDl~~g~s--wRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~ 392 (530)
.+|++.+ ....|+.|.+..+.. -++. + ....+.+.+..-.-....|+++|++
T Consensus 96 ~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~------~---~~~i~~~~p~~~~H~g~~l~fgpDG--------------- 151 (347)
T 3das_A 96 MVYAYFTSASDNRIVRMLYDEKKPSGEQLG------A---PDTVFRGIPKGVIHNGGRIAFGPDK--------------- 151 (347)
T ss_dssp EEEEEEECSSSEEEEEEEBCTTSCTTCCBC------C---CEEEEEEECCCSSCCCCCEEECTTS---------------
T ss_pred EEEEEEecCCCCEEEEEEeCCCCcccccCC------C---cEEEEEcCCCCCCccCccccCCCCC---------------
Confidence 7888654 345666666654310 0000 0 0000111100000011246666654
Q ss_pred cccccCCccccccccCCCceEEEEeC-------------CCCeeEEEecchhcCccccCCccccccceEEeccccCCCCC
Q psy11539 393 NVHHYNGTNVDKTIRDDQRYMYFHSM-------------SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQA 459 (530)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~r~LYf~pl-------------sS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs 459 (530)
+||++-- ..-++++++.. .+......-...++-..|-| .+
T Consensus 152 -------------------~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d----G~ip~~nPf~~~~i~a~G~R----Np 204 (347)
T 3das_A 152 -------------------MLYAGTGESGDTGLSQDRKSLGGKILRMTPD----GEPAPGNPFPGSPVYSYGHR----NV 204 (347)
T ss_dssp -------------------CEEEECBCTTCGGGTTCTTCSTTCEEEECTT----SSBCTTCSSTTCCEEEBCCS----BC
T ss_pred -------------------CEEEEECCCCCCccccCCCCCCCEEEEEeCC----CCccCCCCCCCCeEEeeCCC----Cc
Confidence 4555521 12357777542 22111000001245555766 48
Q ss_pred cceEEcCCCcEEEEccCCC---eEEEEeCCCCccc-cCceeE---EeecCCceee------cceeEEecCCcEEEEEeec
Q psy11539 460 SASAINSNGVMFYNLVTKH---SVGCWNTKTKVYL-PQTQDI---VQTSRDILNF------REEGEEEEEKENTCTFLVN 526 (530)
Q Consensus 460 ~G~aiD~~G~LYft~~~~~---aI~cWnt~~~~~~-~~n~~l---V~~d~~~L~~------Pd~l~Id~dG~lYv~~~sn 526 (530)
-|+++|.+|.||+++...+ .|...... +.|- +.-.+. -....+.+.| |.|+.+. +|.+|+..+.+
T Consensus 205 ~Gla~dp~G~L~~~d~g~~~~deln~i~~G-~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~ 282 (347)
T 3das_A 205 QGLAWDDKQRLFASEFGQDTWDELNAIKPG-DNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYA-EGSVWMAGLRG 282 (347)
T ss_dssp CEEEECTTCCEEEEECCSSSCEEEEEECTT-CBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEE-TTEEEEEESTT
T ss_pred ceEEECCCCCEEEEecCCCCCceeeEEcCC-CEecCCcccCCCCCccccCCcEecCCCCCCCcceEEE-cCceeeccccC
Confidence 8999999999999998763 45555444 3330 000000 0001223444 4588886 68899988776
Q ss_pred eee
Q psy11539 527 KYV 529 (530)
Q Consensus 527 r~~ 529 (530)
+.|
T Consensus 283 ~~l 285 (347)
T 3das_A 283 ERL 285 (347)
T ss_dssp CSE
T ss_pred CEE
Confidence 544
No 100
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.74 E-value=0.00046 Score=72.99 Aligned_cols=116 Identities=16% Similarity=0.052 Sum_probs=81.5
Q ss_pred CcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecC-------
Q psy11539 251 DRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV------- 323 (530)
Q Consensus 251 gRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs------- 323 (530)
.++||.+.+.... . -.|.+||+.|++++.++.... .. .|+++ -++.++|+++.
T Consensus 85 ~~vyV~n~~~~~~-------~-~~VsVID~~t~~vv~~I~vG~-------~P-gia~S----pDgk~lyVan~~~~~~~~ 144 (426)
T 3c75_H 85 RRVYIQDPAHFAA-------I-TQQFVIDGSTGRILGMTDGGF-------LP-HPVAA----EDGSFFAQASTVFERIAR 144 (426)
T ss_dssp TEEEEEECTTTCS-------S-EEEEEEETTTTEEEEEEEECS-------SC-EEEEC----TTSSCEEEEEEEEEETTE
T ss_pred CEEEEECCCcCCC-------C-CeEEEEECCCCEEEEEEECCC-------CC-ceEEC----CCCCEEEEEecccccccc
Confidence 6899999874210 0 469999999999999998753 24 67876 36889999996
Q ss_pred --CCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeec-CeEeeecCCccceecCCCcccccccCCCcccccccccccCCc
Q psy11539 324 --FRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILD-NLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGT 400 (530)
Q Consensus 324 --g~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~-G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~ 400 (530)
..+.|.|+|..+++.-+ .+.+. +..+.--.+..+|+++|++
T Consensus 145 G~~~~~VsviD~~t~~vv~-------------~I~v~g~~r~~~g~~P~~~~~spDG----------------------- 188 (426)
T 3c75_H 145 GKRTDYVEVFDPVTFLPIA-------------DIELPDAPRFLVGTYQWMNALTPDN----------------------- 188 (426)
T ss_dssp EEEEEEEEEECTTTCCEEE-------------EEEETTCCCCCBSCCGGGSEECTTS-----------------------
T ss_pred CCCCCEEEEEECCCCcEEE-------------EEECCCccccccCCCcceEEEcCCC-----------------------
Confidence 34679999999986543 12222 1111111234588888886
Q ss_pred cccccccCCCceEEEEeCC-CCeeEEEecchhc
Q psy11539 401 NVDKTIRDDQRYMYFHSMS-SNRHYYVSTTDLR 432 (530)
Q Consensus 401 ~~~~~~~~~~r~LYf~pls-S~~lY~V~T~~Lr 432 (530)
++||..-.. +..+..|++.-.+
T Consensus 189 ----------k~lyV~n~~~~~~VsVID~~t~k 211 (426)
T 3c75_H 189 ----------KNLLFYQFSPAPAVGVVDLEGKT 211 (426)
T ss_dssp ----------SEEEEEECSSSCEEEEEETTTTE
T ss_pred ----------CEEEEEecCCCCeEEEEECCCCe
Confidence 899998765 6778889876654
No 101
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.73 E-value=0.00072 Score=71.58 Aligned_cols=87 Identities=10% Similarity=0.187 Sum_probs=62.0
Q ss_pred CCceEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccc--cCccccceEEEeecCCC
Q psy11539 237 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVF--EGSLFSNIVTEVVEDCD 314 (530)
Q Consensus 237 ~~LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~--~~S~lndIvVDv~~~c~ 314 (530)
++|..+-+|.++.+|||||.+... .+|++++..+++......++..+.. ....+.+|+++..- ..
T Consensus 24 ~~l~~P~~~a~~pdG~l~V~e~~g------------g~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf-~~ 90 (454)
T 1cru_A 24 SNLNKPHALLWGPDNQIWLTERAT------------GKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDF-KN 90 (454)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTT------------CEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTT-TT
T ss_pred CCCCCceEEEEcCCCcEEEEEcCC------------CEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCc-Cc
Confidence 458888999999999999998742 3699999877776555567654322 34667899998211 12
Q ss_pred CeEEEEecCC------------CCeEEEEEccCC
Q psy11539 315 HVFAYVNDVF------------RYGLIVYDFFKN 336 (530)
Q Consensus 315 ~~~AYItDsg------------~~gLIVyDl~~g 336 (530)
++.+|++++. ...|..|++..+
T Consensus 91 ~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~ 124 (454)
T 1cru_A 91 NPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKS 124 (454)
T ss_dssp SCEEEEEEEEECTTC--CCSCEEEEEEEEEEETT
T ss_pred CCEEEEEEeccccCCCccccccccEEEEEEECCC
Confidence 7899999874 346888877543
No 102
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.72 E-value=0.0016 Score=65.44 Aligned_cols=71 Identities=15% Similarity=0.151 Sum_probs=50.9
Q ss_pred CcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecC-------
Q psy11539 251 DRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV------- 323 (530)
Q Consensus 251 gRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs------- 323 (530)
.++||+|.|.... ..-.|.+||+++++++.++... ... .|++. .++.++|+++.
T Consensus 16 ~~~yv~~~~~~~~-------~d~~v~v~D~~t~~~~~~i~~g-------~~p-~i~~s----pdg~~lyv~~~~~~~~~~ 76 (361)
T 2oiz_A 16 NRIYVMDSVFMHL-------TESRVHVYDYTNGKFLGMVPTA-------FNG-HVQVS----NDGKKIYTMTTYHERITR 76 (361)
T ss_dssp GEEEEEECCGGGG-------GGCEEEEEETTTCCEEEEEECC-------EEE-EEEEC----TTSSEEEEEEEEETTSSS
T ss_pred CEEEEECCCCCcc-------ccCeEEEEECCCCeEEEEecCC-------CCC-ceEEC----CCCCEEEEEEeccccccc
Confidence 4799999885322 1246999999999999876542 223 67776 36789999985
Q ss_pred --CCCeEEEEEccCCeEEE
Q psy11539 324 --FRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 324 --g~~gLIVyDl~~g~swR 340 (530)
....|.|||..+++..+
T Consensus 77 g~~~~~v~v~d~~t~~~~~ 95 (361)
T 2oiz_A 77 GKRSDVVEVWDADKLTFEK 95 (361)
T ss_dssp SCEEEEEEEEETTTCCEEE
T ss_pred CCCCCEEEEEECcCCcEEE
Confidence 13459999999876543
No 103
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.71 E-value=0.0016 Score=64.29 Aligned_cols=160 Identities=12% Similarity=0.062 Sum_probs=102.3
Q ss_pred cEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecC--CCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeE
Q psy11539 284 TLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV--FRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLK 361 (530)
Q Consensus 284 ~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs--g~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~ 361 (530)
+++++|+++. ..|-+.|.+| ++.+|++-- +...|.++|+++|+.-+-.
T Consensus 10 ~v~~~~phd~-----~~ftqGL~~~------~~~LyestG~~g~S~v~~vD~~tgkv~~~~------------------- 59 (243)
T 3mbr_X 10 RVVKRYPHDT-----TAFTEGLFYL------RGHLYESTGETGRSSVRKVDLETGRILQRA------------------- 59 (243)
T ss_dssp EEEEEEECCT-----TCCEEEEEEE------TTEEEEEECCTTSCEEEEEETTTCCEEEEE-------------------
T ss_pred EEEEEcCCCC-----ccccccEEEE------CCEEEEECCCCCCceEEEEECCCCCEEEEE-------------------
Confidence 6889997754 4778899998 479999954 4568999999999665422
Q ss_pred eeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCcc
Q psy11539 362 FRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSS 441 (530)
Q Consensus 362 f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~ 441 (530)
.+....||..+...+ ..||-..--+.++|.++++-|+..
T Consensus 60 -~l~~~~fgeGi~~~~---------------------------------~~ly~ltw~~~~v~v~D~~tl~~~------- 98 (243)
T 3mbr_X 60 -EVPPPYFGAGIVAWR---------------------------------DRLIQLTWRNHEGFVYDLATLTPR------- 98 (243)
T ss_dssp -ECCTTCCEEEEEEET---------------------------------TEEEEEESSSSEEEEEETTTTEEE-------
T ss_pred -eCCCCcceeEEEEeC---------------------------------CEEEEEEeeCCEEEEEECCcCcEE-------
Confidence 122244555444433 568887777888888887655422
Q ss_pred ccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEE
Q psy11539 442 DIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTC 521 (530)
Q Consensus 442 ~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv 521 (530)
..|.. + +..-|++.|. +.||+++ ..+.|..+|+.+..... .+ .|..+...+.+.+.|... +|.||+
T Consensus 99 ---~ti~~-~-----~~Gwglt~dg-~~L~vSd-gs~~l~~iDp~t~~~~~-~I-~V~~~g~~~~~lNeLe~~-~G~lya 164 (243)
T 3mbr_X 99 ---ARFRY-P-----GEGWALTSDD-SHLYMSD-GTAVIRKLDPDTLQQVG-SI-KVTAGGRPLDNLNELEWV-NGELLA 164 (243)
T ss_dssp ---EEEEC-S-----SCCCEEEECS-SCEEEEC-SSSEEEEECTTTCCEEE-EE-ECEETTEECCCEEEEEEE-TTEEEE
T ss_pred ---EEEeC-C-----CCceEEeeCC-CEEEEEC-CCCeEEEEeCCCCeEEE-EE-EEccCCcccccceeeEEe-CCEEEE
Confidence 12222 1 2456777664 6899999 57899999998322211 11 122223335566777765 788997
Q ss_pred EE-eecee
Q psy11539 522 TF-LVNKY 528 (530)
Q Consensus 522 ~~-~snr~ 528 (530)
.+ .+|..
T Consensus 165 nvw~s~~I 172 (243)
T 3mbr_X 165 NVWLTSRI 172 (243)
T ss_dssp EETTTTEE
T ss_pred EECCCCeE
Confidence 66 35543
No 104
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.71 E-value=0.00032 Score=73.45 Aligned_cols=117 Identities=15% Similarity=0.052 Sum_probs=79.7
Q ss_pred CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC-----
Q psy11539 250 CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF----- 324 (530)
Q Consensus 250 cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg----- 324 (530)
..+|||.|.+.-.. .-.|.++|+.|++++.++.... ... |++. .++.++|+++..
T Consensus 44 ~~~vyV~~~~~~~~--------~~~V~ViD~~t~~v~~~I~vG~-------~P~-va~s----pDG~~lyVan~~~~r~~ 103 (386)
T 3sjl_D 44 ARRVYVNDPAHFAA--------VTQQFVIDGEAGRVIGMIDGGF-------LPN-PVVA----DDGSFIAHASTVFSRIA 103 (386)
T ss_dssp TTEEEEEECGGGCS--------SEEEEEEETTTTEEEEEEEECS-------SCE-EEEC----TTSSCEEEEEEEEEETT
T ss_pred CCEEEEEcCcccCC--------CCEEEEEECCCCeEEEEEECCC-------CCc-EEEC----CCCCEEEEEcccccccc
Confidence 45899999973110 1369999999999999887632 123 7776 468899999852
Q ss_pred ----CCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecC-eEeeecCCccceecCCCcccccccCCCcccccccccccCC
Q psy11539 325 ----RYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDN-LKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNG 399 (530)
Q Consensus 325 ----~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G-~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~ 399 (530)
...|-|||..+++.-+ .+.+.+ +..+--....+|+++|++
T Consensus 104 ~G~~~~~VsviD~~t~~v~~-------------~I~v~~g~r~~~g~~P~~~a~spDG---------------------- 148 (386)
T 3sjl_D 104 RGERTDYVEVFDPVTLLPTA-------------DIELPDAPRFLVGTYPWMTSLTPDG---------------------- 148 (386)
T ss_dssp EEEEEEEEEEECTTTCCEEE-------------EEEETTCCCCCBSCCGGGEEECTTS----------------------
T ss_pred cCCCCCEEEEEECCCCeEEE-------------EEECCCccccccCCCCceEEEcCCC----------------------
Confidence 3569999999986543 122211 111111234578888886
Q ss_pred ccccccccCCCceEEEEeCC-CCeeEEEecchhc
Q psy11539 400 TNVDKTIRDDQRYMYFHSMS-SNRHYYVSTTDLR 432 (530)
Q Consensus 400 ~~~~~~~~~~~r~LYf~pls-S~~lY~V~T~~Lr 432 (530)
++||..-.. +..+..|+++-.+
T Consensus 149 -----------k~lyVan~~~~~~VsVID~~t~~ 171 (386)
T 3sjl_D 149 -----------KTLLFYQFSPAPAVGVVDLEGKA 171 (386)
T ss_dssp -----------SEEEEEECSSSCEEEEEETTTTE
T ss_pred -----------CEEEEEEcCCCCeEEEEECCCCc
Confidence 899998764 6778888876654
No 105
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.71 E-value=0.0011 Score=71.01 Aligned_cols=184 Identities=11% Similarity=0.013 Sum_probs=114.4
Q ss_pred EeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCC
Q psy11539 247 VDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRY 326 (530)
Q Consensus 247 ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~ 326 (530)
+|..++++|.-.+. -.|.+||+.++++++++..... ...++++ .++.++|+++.. .
T Consensus 145 ~~p~~~~~vs~~~d------------~~V~v~D~~t~~~~~~i~~g~~-------~~~v~~s----pdg~~l~v~~~d-~ 200 (543)
T 1nir_A 145 LDLPNLFSVTLRDA------------GQIALVDGDSKKIVKVIDTGYA-------VHISRMS----ASGRYLLVIGRD-A 200 (543)
T ss_dssp CCGGGEEEEEEGGG------------TEEEEEETTTCCEEEEEECSTT-------EEEEEEC----TTSCEEEEEETT-S
T ss_pred cCCCCEEEEEEcCC------------CeEEEEECCCceEEEEEecCcc-------cceEEEC----CCCCEEEEECCC-C
Confidence 45678888886543 3489999999999998876432 3456665 467899999987 8
Q ss_pred eEEEEEc--cCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCC----CcccccccCCCcccccccccccCCc
Q psy11539 327 GLIVYDF--FKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISP----ELSGYKYKRHPYEYYHYNVHHYNGT 400 (530)
Q Consensus 327 gLIVyDl--~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp----~~~~~~~~~~~~~~y~~~~~~~~~~ 400 (530)
.|.+||+ .+++.-+ .+.. | .+..+|+++| ++
T Consensus 201 ~V~v~D~~~~t~~~~~-------------~i~~-g------~~p~~va~sp~~~~dg----------------------- 237 (543)
T 1nir_A 201 RIDMIDLWAKEPTKVA-------------EIKI-G------IEARSVESSKFKGYED----------------------- 237 (543)
T ss_dssp EEEEEETTSSSCEEEE-------------EEEC-C------SEEEEEEECCSTTCTT-----------------------
T ss_pred eEEEEECcCCCCcEEE-------------EEec-C------CCcceEEeCCCcCCCC-----------------------
Confidence 9999999 6764332 1111 1 1345789998 65
Q ss_pred cccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEecccc------CCCCCcceEEcC-CCcEEEE
Q psy11539 401 NVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRF------KNTQASASAINS-NGVMFYN 473 (530)
Q Consensus 401 ~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG------~~sqs~G~aiD~-~G~LYft 473 (530)
++||.....+..+..+++.-++- ...+...|..+ ......+++++. .+.+|++
T Consensus 238 ----------~~l~v~~~~~~~v~v~D~~t~~~----------~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs 297 (543)
T 1nir_A 238 ----------RYTIAGAYWPPQFAIMDGETLEP----------KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVN 297 (543)
T ss_dssp ----------TEEEEEEEESSEEEEEETTTCCE----------EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEE
T ss_pred ----------CEEEEEEccCCeEEEEecccccc----------ceeecccCcccCccccccCCceEEEEECCCCCEEEEE
Confidence 78888775555565555432211 11111111100 011345667774 5677888
Q ss_pred ccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCc-EEEEE
Q psy11539 474 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKE-NTCTF 523 (530)
Q Consensus 474 ~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~-lYv~~ 523 (530)
.-..+.|..||..+.. +..+.... .-.||.++.++.+|. +|+..
T Consensus 298 ~~~~g~i~vvd~~~~~----~l~~~~i~--~~~~~~~~~~spdg~~l~va~ 342 (543)
T 1nir_A 298 VKETGKVLLVNYKDID----NLTVTSIG--AAPFLHDGGWDSSHRYFMTAA 342 (543)
T ss_dssp ETTTTEEEEEECTTSS----SCEEEEEE--CCSSCCCEEECTTSCEEEEEE
T ss_pred ECCCCeEEEEEecCCC----cceeEEec--cCcCccCceECCCCCEEEEEe
Confidence 8889999999987221 22211111 235788999999886 55544
No 106
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=97.71 E-value=0.0068 Score=60.90 Aligned_cols=130 Identities=13% Similarity=0.108 Sum_probs=82.9
Q ss_pred CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCC-cEEEEeCCCCCcccCcc
Q psy11539 190 RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCD-RLWIMDTGVTNILSSIQ 268 (530)
Q Consensus 190 ~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cg-RLWVLDtG~~~~~~~~~ 268 (530)
..++||+-........-++..++..+.. .+.-.|. + ... .+.++++| +|||......... .
T Consensus 15 ~~~~yv~~~~~~~~~d~~v~v~D~~t~~---~~~~i~~----------g-~~p-~i~~spdg~~lyv~~~~~~~~~---~ 76 (361)
T 2oiz_A 15 ENRIYVMDSVFMHLTESRVHVYDYTNGK---FLGMVPT----------A-FNG-HVQVSNDGKKIYTMTTYHERIT---R 76 (361)
T ss_dssp GGEEEEEECCGGGGGGCEEEEEETTTCC---EEEEEEC----------C-EEE-EEEECTTSSEEEEEEEEETTSS---S
T ss_pred CCEEEEECCCCCccccCeEEEEECCCCe---EEEEecC----------C-CCC-ceEECCCCCEEEEEEecccccc---c
Confidence 3678888654322112377777754321 1211111 1 244 88998877 5999875211000 0
Q ss_pred ccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC-CCeEEEEEccCCeEEEE
Q psy11539 269 QLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 269 ~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg-~~gLIVyDl~~g~swRv 341 (530)
-...-.|.+||+.+.++++++.++......+.....|+++ .++.++|++..+ ...|.|||.++++.-+.
T Consensus 77 g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~s----pdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 77 GKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQT----TDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp SCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEEC----TTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEEC----CCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 0011359999999999999999865433344567889998 467899999876 67899999999976553
No 107
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.67 E-value=0.0016 Score=67.25 Aligned_cols=124 Identities=12% Similarity=-0.058 Sum_probs=79.3
Q ss_pred eCCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCC-cEEEEeCCCCCcccCc
Q psy11539 189 WRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCD-RLWIMDTGVTNILSSI 267 (530)
Q Consensus 189 ~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cg-RLWVLDtG~~~~~~~~ 267 (530)
...|+||+-+......- ++..|+..+.. .+.-+|- +. .. ++.++.++ +|||.+++.....
T Consensus 30 ~~~~~yV~~~~~~~~~d-~vsvID~~t~~---v~~~i~v----------G~-~P-~i~~spDg~~lyVan~~~~r~~--- 90 (368)
T 1mda_H 30 ISRRSHITLPAYFAGTT-ENWVSCAGCGV---TLGHSLG----------AF-LS-LAVAGHSGSDFALASTSFARSA--- 90 (368)
T ss_dssp CTTEEEEEECTTTCSSE-EEEEEETTTTE---EEEEEEE----------CT-TC-EEEECTTSSCEEEEEEEETTTT---
T ss_pred CCCeEEEECCccCCccc-eEEEEECCCCe---EEEEEeC----------CC-CC-ceEECCCCCEEEEEcccccccc---
Confidence 45899999887542222 78888865422 2322221 11 14 68888866 6999987531100
Q ss_pred cccCCCEEEEEECCCCcEEEEEECCCcc-cccCccccceEEEeecCCCCeEEEEecCC-CCeEEE--EEccC
Q psy11539 268 QQLCPPKIMVFDLKTNTLIRKYILPTAQ-VFEGSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIV--YDFFK 335 (530)
Q Consensus 268 ~~~c~PKLvvfDL~Td~li~~y~~P~~v-~~~~S~lndIvVDv~~~c~~~~AYItDsg-~~gLIV--yDl~~ 335 (530)
.....-.|.+||+.|+++++++.+|..- ...+.....|+++ .++.++||++.+ ...|.| +|..+
T Consensus 91 ~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~S----pDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 91 KGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNC----ASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEEC----TTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred cCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEc----CCCCEEEEEccCCCCeEEEEEEchhh
Confidence 0001245999999999999999997210 0012345688887 367899999876 567888 89987
No 108
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.55 E-value=0.012 Score=63.13 Aligned_cols=86 Identities=10% Similarity=0.127 Sum_probs=61.8
Q ss_pred CceEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeE
Q psy11539 238 SLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 317 (530)
Q Consensus 238 ~LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~ 317 (530)
++..+..+++-.+| |+|-..|..+ -..+..|+++|.+|+++++++..+.. +..+--++.+. -++..
T Consensus 136 g~s~Ph~~~~~pdG-i~Vs~~g~~~------g~~~g~v~vlD~~T~~v~~~~~~~~~---~~~~~Yd~~~~----p~~~~ 201 (462)
T 2ece_A 136 GYSRLHTVHCGPDA-IYISALGNEE------GEGPGGILMLDHYSFEPLGKWEIDRG---DQYLAYDFWWN----LPNEV 201 (462)
T ss_dssp CEEEEEEEEECSSC-EEEEEEEETT------SCSCCEEEEECTTTCCEEEECCSBCT---TCCCCCCEEEE----TTTTE
T ss_pred CCCcccceeECCCe-EEEEcCCCcC------CCCCCeEEEEECCCCeEEEEEccCCC---CccccceEEEC----CCCCE
Confidence 35577888888888 8887766543 23567899999999999999887532 12222356665 24668
Q ss_pred EEEec------------------CCCCeEEEEEccCCe
Q psy11539 318 AYVND------------------VFRYGLIVYDFFKNT 337 (530)
Q Consensus 318 AYItD------------------sg~~gLIVyDl~~g~ 337 (530)
+|.++ .....|.|||+.+++
T Consensus 202 mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k 239 (462)
T 2ece_A 202 LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK 239 (462)
T ss_dssp EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE
T ss_pred EEEccCcCccccccccchhhhhhccCCEEEEEECCCCc
Confidence 99997 236899999999873
No 109
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.54 E-value=0.00084 Score=69.47 Aligned_cols=136 Identities=10% Similarity=0.038 Sum_probs=83.4
Q ss_pred cccCCCceeeeEEeC---C--eEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCC
Q psy11539 176 FIPENNLPLGIGIWR---S--TIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKC 250 (530)
Q Consensus 176 Yip~n~iP~GV~v~~---g--RlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~c 250 (530)
|.+....|.||+++. + ||||.-++ +.+.-.-|-.++... +.-..+..|. -..|.++..+.+|+.
T Consensus 107 ~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~-~~~s~ielf~~d~~~-~~~~~~~~~~---------g~~~~~pND~~v~~~ 175 (355)
T 3sre_A 107 LDISSFNPHGISTFIDDDNTVYLLVVNHP-GSSSTVEVFKFQEEE-KSLLHLKTIR---------HKLLPSVNDIVAVGP 175 (355)
T ss_dssp CCGGGCCEEEEEEEECTTCCEEEEEEECS-TTCCEEEEEEEETTT-TEEEEEEEEC---------CTTCSSEEEEEEEET
T ss_pred CCcCceeeeeeEEEECCCCcEEEEEEECC-CCCCeEEEEEEECCC-CEEEEEeccc---------cCCCCCCceEEEeCC
Confidence 455667899999952 3 79999877 222222333343321 1011121111 146889999999999
Q ss_pred CcEEEEeCCCCCcc-----cCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCC
Q psy11539 251 DRLWIMDTGVTNIL-----SSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 325 (530)
Q Consensus 251 gRLWVLDtG~~~~~-----~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~ 325 (530)
|++||-+...-... +........+|+.||.. ++. + ++..-.+.|.|+++ .++.++|++|+..
T Consensus 176 G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~-~------~~~~l~~pNGia~s----pDg~~lYvadt~~ 242 (355)
T 3sre_A 176 EHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVR-V------VAEGFDFANGINIS----PDGKYVYIAELLA 242 (355)
T ss_dssp TEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCE-E------EEEEESSEEEEEEC----TTSSEEEEEEGGG
T ss_pred CCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEE-E------eecCCcccCcceEC----CCCCEEEEEeCCC
Confidence 99999876432110 00011234578888873 221 1 11223567899997 3567999999999
Q ss_pred CeEEEEEccC
Q psy11539 326 YGLIVYDFFK 335 (530)
Q Consensus 326 ~gLIVyDl~~ 335 (530)
..|.+|++..
T Consensus 243 ~~I~~~~~~~ 252 (355)
T 3sre_A 243 HKIHVYEKHA 252 (355)
T ss_dssp TEEEEEEECT
T ss_pred CeEEEEEECC
Confidence 9999999874
No 110
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.47 E-value=0.0045 Score=63.92 Aligned_cols=205 Identities=10% Similarity=-0.014 Sum_probs=114.8
Q ss_pred EEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcc--cccCccccceEE---EeecCCCCeEE
Q psy11539 245 MSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQ--VFEGSLFSNIVT---EVVEDCDHVFA 318 (530)
Q Consensus 245 v~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v--~~~~S~lndIvV---Dv~~~c~~~~A 318 (530)
+.-|+ .+||||-|... .+|.++|+.++.+... .+|.-. -.+......|.+ | .++.+
T Consensus 18 ~~wd~~~g~~~vs~l~~------------g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D-----~~grL 79 (334)
T 2p9w_A 18 TIYDRTRQVFYQSNLYK------------GRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHD-----NSKRL 79 (334)
T ss_dssp EEEETTTTEEEEEETTT------------TEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSS-----SCCEE
T ss_pred ccCcCCCCEEEEEeccC------------CEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccC-----CCCcE
Confidence 45555 78999999865 3499999987777655 664311 122233467888 5 23666
Q ss_pred EE-ecC------------CCCeEEEEEcc----CCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCccccc
Q psy11539 319 YV-NDV------------FRYGLIVYDFF----KNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYK 381 (530)
Q Consensus 319 YI-tDs------------g~~gLIVyDl~----~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~ 381 (530)
+| +|. +...|++||+. ....|++....... +.....|+.+ -+.++||++++|
T Consensus 80 ~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~----~~~~~~g~~~---~~~nDvavD~~G---- 148 (334)
T 2p9w_A 80 FAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQD----EFEKKAGKRP---FGVVQSAQDRDG---- 148 (334)
T ss_dssp EEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHH----HHHHHHSSCC---EEEEEEEECTTS----
T ss_pred EEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccc----cccccccccc---cCCceeEECCCC----
Confidence 66 773 46789999999 44456654221000 0000011111 145678888875
Q ss_pred ccCCCcccccccccccCCccccccccCCCceEEEEeCCC-CeeEEEecchhcCccccCCccccccceEEeccccCCCCCc
Q psy11539 382 YKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQAS 460 (530)
Q Consensus 382 ~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS-~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~ 460 (530)
..|-.---+ ..+++|+..=..-..+ ......-..+ .-..
T Consensus 149 ------------------------------naYVt~s~~~~~I~rV~pdG~~~~~~-------~~~~~~~~~~---~G~n 188 (334)
T 2p9w_A 149 ------------------------------NSYVAFALGMPAIARVSADGKTVSTF-------AWESGNGGQR---PGYS 188 (334)
T ss_dssp ------------------------------CEEEEEEESSCEEEEECTTSCCEEEE-------EECCCCSSSC---CSCS
T ss_pred ------------------------------CEEEeCCCCCCeEEEEeCCCCEEeee-------eecCCCcccc---cCcc
Confidence 456633333 5688886421100000 0000000011 1267
Q ss_pred ceEEcCCCcEEEEccCCCeEEEEeCCCCccccCceeEEeec----CCceeeccee-EEecCCcE-EEEE
Q psy11539 461 ASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTS----RDILNFREEG-EEEEEKEN-TCTF 523 (530)
Q Consensus 461 G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~lV~~d----~~~L~~Pd~l-~Id~dG~l-Yv~~ 523 (530)
||+++.+|.+.+..-..+.|.++|.. ++... .+... ...+..|++| .+..+|.+ +|..
T Consensus 189 GIv~~pdg~~Liv~~~~g~L~~fD~~-~pv~~----~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~ 252 (334)
T 2p9w_A 189 GITFDPHSNKLIAFGGPRALTAFDVS-KPYAW----PEPVKINGDFGTLSGTEKIVTVPVGNESVLVGA 252 (334)
T ss_dssp EEEEETTTTEEEEESSSSSEEEEECS-SSSCC----CEECEESSCCCCCTTEEEEEEEEETTEEEEEEE
T ss_pred eEEEeCCCCEEEEEcCCCeEEEEcCC-CCcce----eecccccCCcccccCcccccccccCCEEEEEEc
Confidence 99999888554444348999999988 54321 12211 1367889995 67788888 5544
No 111
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=97.47 E-value=0.0037 Score=61.93 Aligned_cols=199 Identities=12% Similarity=0.144 Sum_probs=108.3
Q ss_pred EEEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEEECC-CCcEEEEEECCCcccccCccccceEEEeecCCCCe--
Q psy11539 241 SVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLK-TNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV-- 316 (530)
Q Consensus 241 SV~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~-Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~-- 316 (530)
.+..+.++++|+ |++.+.+ .|.+||+. ++++++....+. .+ ....++++ .++.
T Consensus 41 ~~~~~a~spdg~~l~~~~~~--------------~v~~~~~~~~g~~~~~~~~~~----~g-~~~~~~~s----pdg~~l 97 (365)
T 1jof_A 41 PISWMTFDHERKNIYGAAMK--------------KWSSFAVKSPTEIVHEASHPI----GG-HPRANDAD----TNTRAI 97 (365)
T ss_dssp CCSEEEECTTSSEEEEEEBT--------------EEEEEEEEETTEEEEEEEEEC----CS-SGGGGCTT----SCCEEE
T ss_pred CCcEEEECCCCCEEEEEccc--------------eEEEEEECCCCCEEEeeEeec----CC-CCccEEEC----CCCCEE
Confidence 455677888876 8888765 38899987 888765544321 11 13445655 2455
Q ss_pred EEEEec-------C-----CCCeEEEEEccC-CeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCccccccc
Q psy11539 317 FAYVND-------V-----FRYGLIVYDFFK-NTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYK 383 (530)
Q Consensus 317 ~AYItD-------s-----g~~gLIVyDl~~-g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~ 383 (530)
++|.+| . ..+.+.||++.. |+.-+... .+ ..+-...+.+++++|++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~----------~~-----~~~~~~~~~~~~~spdG------ 156 (365)
T 1jof_A 98 FLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQ----------NY-----EYQENTGIHGMVFDPTE------ 156 (365)
T ss_dssp EEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEE----------EE-----ECCTTCCEEEEEECTTS------
T ss_pred EEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEe----------eE-----EeCCCCcceEEEECCCC------
Confidence 467776 2 345677888763 43221110 00 00001245678888876
Q ss_pred CCCcccccccccccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEec-cc-cCCCCCcc
Q psy11539 384 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLG-SR-FKNTQASA 461 (530)
Q Consensus 384 ~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG-~r-G~~sqs~G 461 (530)
++||........++..+.+. ...+ ..+..+. .. | ..+.+
T Consensus 157 ---------------------------~~l~~~~~~~~~v~~~~~~~--~g~~--------~~~~~~~~~~~g--~~p~~ 197 (365)
T 1jof_A 157 ---------------------------TYLYSADLTANKLWTHRKLA--SGEV--------ELVGSVDAPDPG--DHPRW 197 (365)
T ss_dssp ---------------------------SEEEEEETTTTEEEEEEECT--TSCE--------EEEEEEECSSTT--CCEEE
T ss_pred ---------------------------CEEEEEcCCCCEEEEEEECC--CCCE--------EEeeeEecCCCC--CCCCE
Confidence 78888776666666655321 1111 0111111 11 2 34778
Q ss_pred eEEcCCC-cEEEEccCCCeEEEEeCC--CCccccCceeEEeecCCce---e-------ecceeE-EecCC-cEEEEE
Q psy11539 462 SAINSNG-VMFYNLVTKHSVGCWNTK--TKVYLPQTQDIVQTSRDIL---N-------FREEGE-EEEEK-ENTCTF 523 (530)
Q Consensus 462 ~aiD~~G-~LYft~~~~~aI~cWnt~--~~~~~~~n~~lV~~d~~~L---~-------~Pd~l~-Id~dG-~lYv~~ 523 (530)
++++.+| .||++....+.|.+|+.+ ++.+... ...+..-+..+ . +|.+++ ++.|| +||+..
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYT-HHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE-EEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEc-cceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 8999888 578887667788888643 2322110 01121111111 1 688888 88888 466543
No 112
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.37 E-value=0.021 Score=59.79 Aligned_cols=127 Identities=13% Similarity=-0.022 Sum_probs=82.2
Q ss_pred CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCCc-EEEEeCCCCCc-ccCc
Q psy11539 190 RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIMDTGVTNI-LSSI 267 (530)
Q Consensus 190 ~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgR-LWVLDtG~~~~-~~~~ 267 (530)
.+++||+-.....+ --+|..|+..+.. .+.-.|- +. .+. +.++++|+ |||.++..... .|
T Consensus 44 ~~~vyV~~~~~~~~-~~~V~ViD~~t~~---v~~~I~v----------G~-~P~-va~spDG~~lyVan~~~~r~~~G-- 105 (386)
T 3sjl_D 44 ARRVYVNDPAHFAA-VTQQFVIDGEAGR---VIGMIDG----------GF-LPN-PVVADDGSFIAHASTVFSRIARG-- 105 (386)
T ss_dssp TTEEEEEECGGGCS-SEEEEEEETTTTE---EEEEEEE----------CS-SCE-EEECTTSSCEEEEEEEEEETTEE--
T ss_pred CCEEEEEcCcccCC-CCEEEEEECCCCe---EEEEEEC----------CC-CCc-EEECCCCCEEEEEcccccccccC--
Confidence 68999998752211 1488888865321 2211111 11 123 88888775 99998521100 00
Q ss_pred cccCCCEEEEEECCCCcEEEEEECCCc-ccccCccccceEEEeecCCCCeEEEEecCC-CCeEEEEEccCCeEEE
Q psy11539 268 QQLCPPKIMVFDLKTNTLIRKYILPTA-QVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIVYDFFKNTSYR 340 (530)
Q Consensus 268 ~~~c~PKLvvfDL~Td~li~~y~~P~~-v~~~~S~lndIvVDv~~~c~~~~AYItDsg-~~gLIVyDl~~g~swR 340 (530)
...-.|.+||++|.++++++.+|.. -...+.....++++ .++.++|+++.. ...|-|+|.++++.-+
T Consensus 106 --~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~s----pDGk~lyVan~~~~~~VsVID~~t~~vv~ 174 (386)
T 3sjl_D 106 --ERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLT----PDGKTLLFYQFSPAPAVGVVDLEGKAFKR 174 (386)
T ss_dssp --EEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEEC----TTSSEEEEEECSSSCEEEEEETTTTEEEE
T ss_pred --CCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEc----CCCCEEEEEEcCCCCeEEEEECCCCcEEE
Confidence 0013499999999999999998751 12224567788997 468899999975 6889999999997644
No 113
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.36 E-value=0.049 Score=55.50 Aligned_cols=90 Identities=12% Similarity=-0.034 Sum_probs=61.7
Q ss_pred EEEEeCCC-cEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECC-CcccccCccccceEEEeecCCCCeEEEEe
Q psy11539 244 RMSVDKCD-RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILP-TAQVFEGSLFSNIVTEVVEDCDHVFAYVN 321 (530)
Q Consensus 244 rv~ID~cg-RLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P-~~v~~~~S~lndIvVDv~~~c~~~~AYIt 321 (530)
++.+..+| +|||..+...... .....-.|.+||++|.+++.++.++ ..-...+....+++++ .++.++|++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~---rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~s----pDG~~l~v~ 142 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIA---KGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANT----PNNADLLFF 142 (373)
T ss_pred CeEECCCCCEEEEEeccccccc---cCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEEC----CCCCEEEEE
Confidence 77787777 5999986432100 0012345889999999999999986 2211112345678887 367899999
Q ss_pred cCC-CCeEEEEEccCCeEEEE
Q psy11539 322 DVF-RYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 322 Dsg-~~gLIVyDl~~g~swRv 341 (530)
... ...|.|+| ++++.-+.
T Consensus 143 n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 143 QFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred ecCCCCeEEEEE-CCCCEEeE
Confidence 865 57899999 99876544
No 114
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.24 E-value=0.03 Score=53.20 Aligned_cols=165 Identities=11% Similarity=0.124 Sum_probs=97.5
Q ss_pred CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEE
Q psy11539 250 CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLI 329 (530)
Q Consensus 250 cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLI 329 (530)
.|+|||...+ -.|++||.+ ++++.++..+.. ....+++| .++.+||... ..+|.
T Consensus 107 ~~~l~v~t~~-------------~~l~~~d~~-g~~~~~~~~~~~------~~~~~~~~-----~~g~l~vgt~-~~~l~ 160 (330)
T 3hxj_A 107 EDILYVTSMD-------------GHLYAINTD-GTEKWRFKTKKA------IYATPIVS-----EDGTIYVGSN-DNYLY 160 (330)
T ss_dssp TTEEEEECTT-------------SEEEEECTT-SCEEEEEECSSC------CCSCCEEC-----TTSCEEEECT-TSEEE
T ss_pred CCEEEEEecC-------------CEEEEEcCC-CCEEEEEcCCCc------eeeeeEEc-----CCCEEEEEcC-CCEEE
Confidence 8899996532 249999998 888877776432 35566776 5677999764 46999
Q ss_pred EEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCC
Q psy11539 330 VYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDD 409 (530)
Q Consensus 330 VyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 409 (530)
.||......|+..... + .+..++++++
T Consensus 161 ~~d~~g~~~~~~~~~~----~----------------~~~~~~~d~~--------------------------------- 187 (330)
T 3hxj_A 161 AINPDGTEKWRFKTND----A----------------ITSAASIGKD--------------------------------- 187 (330)
T ss_dssp EECTTSCEEEEEECSS----C----------------CCSCCEECTT---------------------------------
T ss_pred EECCCCCEeEEEecCC----C----------------ceeeeEEcCC---------------------------------
Confidence 9999944557654210 0 1112333222
Q ss_pred CceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCc
Q psy11539 410 QRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKV 489 (530)
Q Consensus 410 ~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~ 489 (530)
..||+.. ..+|+++. +... ..+ .... .....+++.|.+|.||++.. .+.|.|+|.+ +.
T Consensus 188 -g~l~v~t---~~l~~~d~----~g~~---------~~~-~~~~--~~~~~~~~~~~~g~l~v~t~-~~gl~~~~~~-g~ 245 (330)
T 3hxj_A 188 -GTIYFGS---DKVYAINP----DGTE---------KWN-FYAG--YWTVTRPAISEDGTIYVTSL-DGHLYAINPD-GT 245 (330)
T ss_dssp -CCEEEES---SSEEEECT----TSCE---------EEE-ECCS--SCCCSCCEECTTSCEEEEET-TTEEEEECTT-SC
T ss_pred -CEEEEEe---CEEEEECC----CCcE---------EEE-EccC--CcceeceEECCCCeEEEEcC-CCeEEEECCC-CC
Confidence 3577665 45776651 1110 000 0000 12456788999999999975 4689999876 42
Q ss_pred cccCceeEEeecCCceeecceeEEecCCcEEEE
Q psy11539 490 YLPQTQDIVQTSRDILNFREEGEEEEEKENTCT 522 (530)
Q Consensus 490 ~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~ 522 (530)
. +..... .-..+..+.++.+|.||+.
T Consensus 246 ~----~~~~~~---~~~~~~~~~~~~~g~l~v~ 271 (330)
T 3hxj_A 246 E----KWRFKT---GKRIESSPVIGNTDTIYFG 271 (330)
T ss_dssp E----EEEEEC---SSCCCSCCEECTTSCEEEE
T ss_pred E----eEEeeC---CCCccccceEcCCCeEEEe
Confidence 2 111111 1123456677777877763
No 115
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.23 E-value=0.0065 Score=64.26 Aligned_cols=168 Identities=10% Similarity=0.023 Sum_probs=98.9
Q ss_pred cccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccc
Q psy11539 301 LFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGY 380 (530)
Q Consensus 301 ~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~ 380 (530)
....|+++ .++.+||++.....|++++..+|+.-.+..- ++ .+... .-..|++|||++|+-
T Consensus 28 ~P~~~a~~-----pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~---~~----~~~~~----~g~~Gllgia~~Pdf--- 88 (454)
T 1cru_A 28 KPHALLWG-----PDNQIWLTERATGKILRVNPESGSVKTVFQV---PE----IVNDA----DGQNGLLGFAFHPDF--- 88 (454)
T ss_dssp SEEEEEEC-----TTSCEEEEETTTCEEEEECTTTCCEEEEEEC---TT----CCCCT----TSSCSEEEEEECTTT---
T ss_pred CceEEEEc-----CCCcEEEEEcCCCEEEEEECCCCcEeEEecC---Cc----ccccc----CCCCceeEEEECCCc---
Confidence 34567777 5678999998766788888766655444310 01 00000 012488899999972
Q ss_pred cccCCCcccccccccccCCccccccccCCCceEEEEeCC------------CCeeEEEecchhcCccccCCccccccceE
Q psy11539 381 KYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMS------------SNRHYYVSTTDLRNSSRYVNSSDIDEYFH 448 (530)
Q Consensus 381 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pls------------S~~lY~V~T~~Lrn~s~~~~~~~~~~~v~ 448 (530)
..+++||+.... ..++++...+.- +..+ .+...-+.
T Consensus 89 ---------------------------~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~-~~~~----~~~~~i~~ 136 (454)
T 1cru_A 89 ---------------------------KNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKS-TDTL----EKPVDLLA 136 (454)
T ss_dssp ---------------------------TTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETT-TTEE----EEEEEEEE
T ss_pred ---------------------------CcCCEEEEEEeccccCCCccccccccEEEEEEECCC-CCCc----CCcEEEEE
Confidence 123677776642 356777753210 0011 00011112
Q ss_pred EeccccCCCCCcceEEcCCCcEEEEccC--------------------------------CCeEEEEeCCCCccccCc--
Q psy11539 449 YLGSRFKNTQASASAINSNGVMFYNLVT--------------------------------KHSVGCWNTKTKVYLPQT-- 494 (530)
Q Consensus 449 ~lG~rG~~sqs~G~aiD~~G~LYft~~~--------------------------------~~aI~cWnt~~~~~~~~n-- 494 (530)
.+...+ .-...++++|.+|.||++.-. ..+|.+.+++ +..-+.|
T Consensus 137 ~~p~~~-~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~d-G~ip~~Npf 214 (454)
T 1cru_A 137 GLPSSK-DHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLD-GSIPKDNPS 214 (454)
T ss_dssp EECCCS-SCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTT-SCCCTTCCE
T ss_pred cCCCCC-CCCCCeEeECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCC-CCCCCCCCC
Confidence 222211 124788999999999998432 3679999998 6532222
Q ss_pred -----eeEEeecCCceeecceeEEecCCcEEEEEe
Q psy11539 495 -----QDIVQTSRDILNFREEGEEEEEKENTCTFL 524 (530)
Q Consensus 495 -----~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~ 524 (530)
.++.+. .+.-|.|++++.+|.||+...
T Consensus 215 ~~~~~~ei~a~---G~RNp~gla~dp~G~L~~~d~ 246 (454)
T 1cru_A 215 FNGVVSHIYTL---GHRNPQGLAFTPNGKLLQSEQ 246 (454)
T ss_dssp ETTEECSEEEB---CCSEEEEEEECTTSCEEEEEE
T ss_pred CCCCcceEEEE---CCCCcceEEECCCCCEEEEec
Confidence 123332 356789999999999999764
No 116
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.22 E-value=0.011 Score=65.28 Aligned_cols=188 Identities=12% Similarity=0.126 Sum_probs=107.2
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCc-ccccCccccceEEEeecCCCCeEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTA-QVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~-v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
.|+.+..|..|+|||--.+ . |..||.++++..+ +....+ --.....+..|..| .++.+|
T Consensus 453 ~v~~i~~d~~g~lwigt~~--G------------l~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d-----~~g~lW 512 (795)
T 4a2l_A 453 NVYAILPDGEGNLWLGTLS--A------------LVRFNPEQRSFTT-IEKEKDGTPVVSKQITTLFRD-----SHKRLW 512 (795)
T ss_dssp CEEEEEECSSSCEEEEESS--C------------EEEEETTTTEEEE-CCBCTTCCBCCCCCEEEEEEC-----TTCCEE
T ss_pred eeEEEEECCCCCEEEEecC--c------------eeEEeCCCCeEEE-ccccccccccCCceEEEEEEC-----CCCCEE
Confidence 5788899999999997432 1 9999998876543 322110 00012345566666 678899
Q ss_pred EecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCC
Q psy11539 320 VNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNG 399 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~ 399 (530)
|+-. .||.+||..+++. ++.+.. .. ..+ -...+.+|+.+++
T Consensus 513 igt~--~Gl~~~~~~~~~~-~~~~~~--~~---~~l--------~~~~i~~i~~d~~----------------------- 553 (795)
T 4a2l_A 513 IGGE--EGLSVFKQEGLDI-QKASIL--PV---SNV--------TKLFTNCIYEASN----------------------- 553 (795)
T ss_dssp EEES--SCEEEEEEETTEE-EECCCS--CS---CGG--------GGSCEEEEEECTT-----------------------
T ss_pred EEeC--CceEEEeCCCCeE-EEecCC--CC---CCC--------CCCeeEEEEECCC-----------------------
Confidence 9876 6999999998866 543210 00 000 0012334544443
Q ss_pred ccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEecc-ccC-CCCCcceEEcCCCcEEEEccCC
Q psy11539 400 TNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGS-RFK-NTQASASAINSNGVMFYNLVTK 477 (530)
Q Consensus 400 ~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~-rG~-~sqs~G~aiD~~G~LYft~~~~ 477 (530)
..|++.... -+++.+..- . .++.+.. .|. ...-.+++.|++|+|+++. .
T Consensus 554 -----------g~lWigT~~--Gl~~~d~~~---~-----------~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~ 604 (795)
T 4a2l_A 554 -----------GIIWVGTRE--GFYCFNEKD---K-----------QIKRYNTTNGLPNNVVYGILEDSFGRLWLST--N 604 (795)
T ss_dssp -----------SCEEEEESS--CEEEEETTT---T-----------EEEEECGGGTCSCSCEEEEEECTTSCEEEEE--T
T ss_pred -----------CCEEEEeCC--CceeECCCC---C-----------cEEEeCCCCCCchhheEEEEECCCCCEEEEc--C
Confidence 346665543 466665211 0 1222221 111 1234467889999999998 4
Q ss_pred CeEEEEeCCCCccccCceeEEeecCCce---ee-cceeEEecCCcEEEE
Q psy11539 478 HSVGCWNTKTKVYLPQTQDIVQTSRDIL---NF-REEGEEEEEKENTCT 522 (530)
Q Consensus 478 ~aI~cWnt~~~~~~~~n~~lV~~d~~~L---~~-Pd~l~Id~dG~lYv~ 522 (530)
++|.|||++++.+ ......+ .| .| ...+..+.+|.||+-
T Consensus 605 ~Gl~~~~~~~~~~-----~~~~~~d-Gl~~~~f~~~~~~~~~~G~l~~g 647 (795)
T 4a2l_A 605 RGISCFNPETEKF-----RNFTESD-GLQSNQFNTASYCRTSVGQMYFG 647 (795)
T ss_dssp TEEEEEETTTTEE-----EEECGGG-TCSCSCEEEEEEEECTTSCEEEE
T ss_pred CceEEEcCCCCcE-----EEcCCcC-CCccccCccCceeECCCCeEEEe
Confidence 7899999983333 2222111 12 12 345667888988874
No 117
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.16 E-value=0.01 Score=65.50 Aligned_cols=188 Identities=15% Similarity=0.203 Sum_probs=107.7
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
..|..+..|..|+|||--.+ .|..||.++++..+....+... .....+..|.+| .++.++
T Consensus 450 ~~v~~i~~d~~g~lwigt~~--------------Gl~~~~~~~~~~~~~~~~~~~~-~~~~~i~~i~~d-----~~g~lW 509 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWIGTHA--------------GVFVIDLASKKVIHHYDTSNSQ-LLENFVRSIAQD-----SEGRFW 509 (781)
T ss_dssp CCEEEEEECTTSEEEEEETT--------------EEEEEESSSSSCCEEECTTTSS-CSCSCEEEEEEC-----TTCCEE
T ss_pred CeEEEEEECCCCCEEEEECC--------------ceEEEeCCCCeEEecccCcccc-cccceeEEEEEc-----CCCCEE
Confidence 45788999999999996431 2999999988765433332111 112345667776 678899
Q ss_pred EecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCC
Q psy11539 320 VNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNG 399 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~ 399 (530)
|+-.+ .||++||.++++..++... +. + . ..-+..|+.+++
T Consensus 510 igt~~-~Gl~~~~~~~~~~~~~~~~----~~----l--~------~~~i~~i~~d~~----------------------- 549 (781)
T 3v9f_A 510 IGTFG-GGVGIYTPDMQLVRKFNQY----EG----F--C------SNTINQIYRSSK----------------------- 549 (781)
T ss_dssp EEESS-SCEEEECTTCCEEEEECTT----TT----C--S------CSCEEEEEECTT-----------------------
T ss_pred EEEcC-CCEEEEeCCCCeEEEccCC----CC----C--C------CCeeEEEEECCC-----------------------
Confidence 98653 5899999998866554421 10 0 0 011234444333
Q ss_pred ccccccccCCCceEEEEeCCCCee-EEEecchhcCccccCCccccccceEEecc-ccC-CCCCcceEEcCCCcEEEEccC
Q psy11539 400 TNVDKTIRDDQRYMYFHSMSSNRH-YYVSTTDLRNSSRYVNSSDIDEYFHYLGS-RFK-NTQASASAINSNGVMFYNLVT 476 (530)
Q Consensus 400 ~~~~~~~~~~~r~LYf~plsS~~l-Y~V~T~~Lrn~s~~~~~~~~~~~v~~lG~-rG~-~sqs~G~aiD~~G~LYft~~~ 476 (530)
..|++.... -+ ++.+..- ..++.+.. .|. ...-.+++.|++|.|+++.
T Consensus 550 -----------g~lWi~T~~--Glv~~~d~~~--------------~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t-- 600 (781)
T 3v9f_A 550 -----------GQMWLATGE--GLVCFPSARN--------------FDYQVFQRKEGLPNTHIRAISEDKNGNIWAST-- 600 (781)
T ss_dssp -----------SCEEEEETT--EEEEESCTTT--------------CCCEEECGGGTCSCCCCCEEEECSSSCEEEEC--
T ss_pred -----------CCEEEEECC--CceEEECCCC--------------CcEEEccccCCCCCceEEEEEECCCCCEEEEc--
Confidence 346665442 24 4443210 01222321 111 1234578899999999996
Q ss_pred CCeEEEEeCCCCccccCceeEEeecCCce---ee-cceeEEecCCcEEEE
Q psy11539 477 KHSVGCWNTKTKVYLPQTQDIVQTSRDIL---NF-REEGEEEEEKENTCT 522 (530)
Q Consensus 477 ~~aI~cWnt~~~~~~~~n~~lV~~d~~~L---~~-Pd~l~Id~dG~lYv~ 522 (530)
.++|.|++++++.+ ......+ .| .| ...+..+++|.||+-
T Consensus 601 ~~Gl~~~~~~~~~~-----~~~~~~d-Gl~~~~f~~~~~~~~~~G~l~~g 644 (781)
T 3v9f_A 601 NTGISCYITSKKCF-----YTYDHSN-NIPQGSFISGCVTKDHNGLIYFG 644 (781)
T ss_dssp SSCEEEEETTTTEE-----EEECGGG-TCCSSCEEEEEEEECTTSCEEEE
T ss_pred CCceEEEECCCCce-----EEecccC-CccccccccCceEECCCCEEEEE
Confidence 56899999983332 2222111 12 12 345667888988873
No 118
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.16 E-value=0.032 Score=60.62 Aligned_cols=184 Identities=10% Similarity=0.020 Sum_probs=109.4
Q ss_pred EeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCC
Q psy11539 247 VDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRY 326 (530)
Q Consensus 247 ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~ 326 (530)
.|..++++|...+. -.|.+||+.|++++.++..... ...+++. -++.++|+++ ...
T Consensus 163 ~d~~~~~~V~~~~~------------~~V~viD~~t~~v~~~i~~g~~-------p~~v~~S----pDGr~lyv~~-~dg 218 (567)
T 1qks_A 163 WDLENLFSVTLRDA------------GQIALIDGSTYEIKTVLDTGYA-------VHISRLS----ASGRYLFVIG-RDG 218 (567)
T ss_dssp CCGGGEEEEEETTT------------TEEEEEETTTCCEEEEEECSSC-------EEEEEEC----TTSCEEEEEE-TTS
T ss_pred cCCCceEEEEeCCC------------CeEEEEECCCCeEEEEEeCCCC-------ccceEEC----CCCCEEEEEc-CCC
Confidence 45566788887654 3599999999999999887432 3456665 3678999997 456
Q ss_pred eEEEEEcc--CCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecC----CCcccccccCCCcccccccccccCCc
Q psy11539 327 GLIVYDFF--KNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAIS----PELSGYKYKRHPYEYYHYNVHHYNGT 400 (530)
Q Consensus 327 gLIVyDl~--~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALs----p~~~~~~~~~~~~~~y~~~~~~~~~~ 400 (530)
.|.+||+. +++.-+ .+.++. +..+|++| |++
T Consensus 219 ~V~viD~~~~t~~~v~-------------~i~~G~-------~P~~ia~s~~~~pDG----------------------- 255 (567)
T 1qks_A 219 KVNMIDLWMKEPTTVA-------------EIKIGS-------EARSIETSKMEGWED----------------------- 255 (567)
T ss_dssp EEEEEETTSSSCCEEE-------------EEECCS-------EEEEEEECCSTTCTT-----------------------
T ss_pred eEEEEECCCCCCcEeE-------------EEecCC-------CCceeEEccccCCCC-----------------------
Confidence 89999995 542221 111111 23478898 454
Q ss_pred cccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEecccc------CCCCCcceEEcC-CCcEEEE
Q psy11539 401 NVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRF------KNTQASASAINS-NGVMFYN 473 (530)
Q Consensus 401 ~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG------~~sqs~G~aiD~-~G~LYft 473 (530)
++||.....+..+..+++.-|+-- ..+...|... ......++.... ...+++.
T Consensus 256 ----------k~l~v~n~~~~~v~ViD~~t~~~~----------~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~ 315 (567)
T 1qks_A 256 ----------KYAIAGAYWPPQYVIMDGETLEPK----------KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVN 315 (567)
T ss_dssp ----------TEEEEEEEETTEEEEEETTTCCEE----------EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEE
T ss_pred ----------CEEEEEEccCCeEEEEECCCCcEE----------EEEeccccccccccccCCCceEEEEEcCCCCEEEEE
Confidence 899988888777777775443211 1111111100 001223444443 3456666
Q ss_pred ccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCc-EEEEE
Q psy11539 474 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKE-NTCTF 523 (530)
Q Consensus 474 ~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~-lYv~~ 523 (530)
.-+.+.|..+|.. .. ++..+..... =.||-++.++.+|. +|+.+
T Consensus 316 ~~~~g~v~~vd~~-~~---~~~~v~~i~~--~~~~~d~~~~pdgr~~~va~ 360 (567)
T 1qks_A 316 VKETGKILLVDYT-DL---NNLKTTEISA--ERFLHDGGLDGSHRYFITAA 360 (567)
T ss_dssp ETTTTEEEEEETT-CS---SEEEEEEEEC--CSSEEEEEECTTSCEEEEEE
T ss_pred ecCCCeEEEEecC-CC---ccceeeeeec--cccccCceECCCCCEEEEEe
Confidence 6677899999987 21 1222222112 24677888988885 44444
No 119
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.13 E-value=0.023 Score=62.80 Aligned_cols=195 Identities=10% Similarity=0.062 Sum_probs=107.2
Q ss_pred eEEEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEE
Q psy11539 240 ISVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 318 (530)
Q Consensus 240 vSV~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~A 318 (530)
..|..+..|..|+ |||-=.+. -|..||.+++++. .|...... .....+..|..| .++.+
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~-------------Gl~~~d~~~~~~~-~~~~~~~~-l~~~~v~~i~~d-----~~g~l 465 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAG-------------GLSILHRNSGQVE-NFNQRNSQ-LVNENVYAILPD-----GEGNL 465 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-------------EEEEEETTTCCEE-EECTTTSC-CSCSCEEEEEEC-----SSSCE
T ss_pred ccEEEEEEcCCCCEEEEEeCcC-------------ceeEEeCCCCcEE-EeecCCCC-cCCCeeEEEEEC-----CCCCE
Confidence 4588899999999 99953321 2999999988754 34432111 122344556665 56789
Q ss_pred EEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccC
Q psy11539 319 YVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYN 398 (530)
Q Consensus 319 YItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~ 398 (530)
+|+-. .||.+||.++++..++.+. .++. .+ .. .-+..|+.+++
T Consensus 466 wigt~--~Gl~~~~~~~~~~~~~~~~---~~~~--~~--~~------~~i~~i~~d~~---------------------- 508 (795)
T 4a2l_A 466 WLGTL--SALVRFNPEQRSFTTIEKE---KDGT--PV--VS------KQITTLFRDSH---------------------- 508 (795)
T ss_dssp EEEES--SCEEEEETTTTEEEECCBC---TTCC--BC--CC------CCEEEEEECTT----------------------
T ss_pred EEEec--CceeEEeCCCCeEEEcccc---cccc--cc--CC------ceEEEEEECCC----------------------
Confidence 99865 6899999999866554322 0110 00 00 11233444333
Q ss_pred CccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCC
Q psy11539 399 GTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKH 478 (530)
Q Consensus 399 ~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~ 478 (530)
..|++.... -+|+++..--+- .+.. .. ..-| .......++..|++|.|+++...
T Consensus 509 ------------g~lWigt~~--Gl~~~~~~~~~~-~~~~---~~----~~~~--l~~~~i~~i~~d~~g~lWigT~~-- 562 (795)
T 4a2l_A 509 ------------KRLWIGGEE--GLSVFKQEGLDI-QKAS---IL----PVSN--VTKLFTNCIYEASNGIIWVGTRE-- 562 (795)
T ss_dssp ------------CCEEEEESS--CEEEEEEETTEE-EECC---CS----CSCG--GGGSCEEEEEECTTSCEEEEESS--
T ss_pred ------------CCEEEEeCC--ceEEEeCCCCeE-EEec---CC----CCCC--CCCCeeEEEEECCCCCEEEEeCC--
Confidence 356776653 366554321100 1100 00 0000 00123456788999999999764
Q ss_pred eEEEEeCCCCccccCceeEEeecCCce--eecceeEEecCCcEEEEE
Q psy11539 479 SVGCWNTKTKVYLPQTQDIVQTSRDIL--NFREEGEEEEEKENTCTF 523 (530)
Q Consensus 479 aI~cWnt~~~~~~~~n~~lV~~d~~~L--~~Pd~l~Id~dG~lYv~~ 523 (530)
+|.+||+.++.+. .....+ .| ....++..|.+|+||+..
T Consensus 563 Gl~~~d~~~~~~~-----~~~~~~-gl~~~~i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 563 GFYCFNEKDKQIK-----RYNTTN-GLPNNVVYGILEDSFGRLWLST 603 (795)
T ss_dssp CEEEEETTTTEEE-----EECGGG-TCSCSCEEEEEECTTSCEEEEE
T ss_pred CceeECCCCCcEE-----EeCCCC-CCchhheEEEEECCCCCEEEEc
Confidence 8999999734332 111111 11 112357788899888743
No 120
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.11 E-value=0.091 Score=49.73 Aligned_cols=79 Identities=9% Similarity=0.079 Sum_probs=49.9
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
..|..+....++++.+.=. .+ -.|.+||+.+++.++++.-. ...+..+++. .++.+++
T Consensus 33 ~~v~~~~~s~~~~~l~~~~--~d----------g~i~vwd~~~~~~~~~~~~h------~~~v~~~~~~----~~~~~l~ 90 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCS--KD----------SSASVWYSLNGERLGTLDGH------TGTIWSIDVD----CFTKYCV 90 (369)
T ss_dssp SCEEEEEECTTSCEEEEEE--SS----------SCEEEEETTTCCEEEEECCC------SSCEEEEEEC----TTSSEEE
T ss_pred ceEEEEEEcCCCCEEEEEe--CC----------CEEEEEeCCCchhhhhhhhc------CCcEEEEEEc----CCCCEEE
Confidence 3567777777776544311 11 24999999999998876532 2335566664 2344554
Q ss_pred EecCCCCeEEEEEccCCeEEEE
Q psy11539 320 VNDVFRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~swRv 341 (530)
.+. ..+.|.+||+.+++..+.
T Consensus 91 s~~-~dg~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 91 TGS-ADYSIKLWDVSNGQCVAT 111 (369)
T ss_dssp EEE-TTTEEEEEETTTCCEEEE
T ss_pred EEe-CCCeEEEEECCCCcEEEE
Confidence 443 356899999998866543
No 121
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.04 E-value=0.0071 Score=61.29 Aligned_cols=64 Identities=6% Similarity=-0.078 Sum_probs=46.3
Q ss_pred CCcceEEcCCCcEEEEccC-------------CCeEEEEeCCCCccccCc---------eeEEeecCCceeecceeEEec
Q psy11539 458 QASASAINSNGVMFYNLVT-------------KHSVGCWNTKTKVYLPQT---------QDIVQTSRDILNFREEGEEEE 515 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~-------------~~aI~cWnt~~~~~~~~n---------~~lV~~d~~~L~~Pd~l~Id~ 515 (530)
.+.+++++.+|.||++.-. ..+|.+++++ +..-..| .++.+. .+.-|.++++|.
T Consensus 131 ~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d-G~~p~~npf~~~~~~~~~i~a~---G~rnp~gl~~d~ 206 (353)
T 2g8s_A 131 FGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ-GEIPDDNPFIKESGVRAEIWSY---GIRNPQGMAMNP 206 (353)
T ss_dssp CCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT-SCCCTTCTTTTSTTSCTTEEEE---CCSEEEEEEEET
T ss_pred cCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCC-CCCCCCCCCcCCCCCCccEEEE---cCcCccceEEEC
Confidence 3678999999999999633 3589999998 6421111 233332 366799999998
Q ss_pred -CCcEEEEEee
Q psy11539 516 -EKENTCTFLV 525 (530)
Q Consensus 516 -dG~lYv~~~s 525 (530)
+|.||+...-
T Consensus 207 ~~g~l~~~d~g 217 (353)
T 2g8s_A 207 WSNALWLNEHG 217 (353)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCCEEEEecC
Confidence 8999997654
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=97.00 E-value=0.022 Score=57.72 Aligned_cols=111 Identities=9% Similarity=0.046 Sum_probs=62.2
Q ss_pred CCeEEEEecCCCCeEEEEEcc--CCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccc
Q psy11539 314 DHVFAYVNDVFRYGLIVYDFF--KNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYH 391 (530)
Q Consensus 314 ~~~~AYItDsg~~gLIVyDl~--~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~ 391 (530)
++.+++++=...+.|.|||+. +++..+.... ......+..|+++|++
T Consensus 113 d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~-----------------~~~~~~v~~~~~sp~~-------------- 161 (450)
T 2vdu_B 113 DESRLIACADSDKSLLVFDVDKTSKNVLKLRKR-----------------FCFSKRPNAISIAEDD-------------- 161 (450)
T ss_dssp TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE-----------------EECSSCEEEEEECTTS--------------
T ss_pred CCCEEEEEECCCCeEEEEECcCCCCceeeeeec-----------------ccCCCCceEEEEcCCC--------------
Confidence 566766665556789999998 6644433210 0112345678888875
Q ss_pred ccccccCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCC---C
Q psy11539 392 YNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSN---G 468 (530)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~---G 468 (530)
+.|+..... ..++.++....+... .. .....|.. +....+++..+ |
T Consensus 162 -------------------~~l~~~~~~-g~v~~~~~~~~~~~~------~~--~~~~~~h~---~~v~~~~~sp~~~~~ 210 (450)
T 2vdu_B 162 -------------------TTVIIADKF-GDVYSIDINSIPEEK------FT--QEPILGHV---SMLTDVHLIKDSDGH 210 (450)
T ss_dssp -------------------SEEEEEETT-SEEEEEETTSCCCSS------CC--CCCSEECS---SCEEEEEEEECTTSC
T ss_pred -------------------CEEEEEeCC-CcEEEEecCCccccc------cc--ceeeeccc---CceEEEEEcCCCCCC
Confidence 566655443 346666532221110 00 00112222 23456677777 7
Q ss_pred cEEEEccCCCeEEEEeCC
Q psy11539 469 VMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 469 ~LYft~~~~~aI~cWnt~ 486 (530)
.++++--....|.+||..
T Consensus 211 ~~l~s~~~d~~i~vwd~~ 228 (450)
T 2vdu_B 211 QFIITSDRDEHIKISHYP 228 (450)
T ss_dssp EEEEEEETTSCEEEEEES
T ss_pred cEEEEEcCCCcEEEEECC
Confidence 777776677899999987
No 123
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.95 E-value=0.13 Score=55.91 Aligned_cols=252 Identities=11% Similarity=0.037 Sum_probs=132.5
Q ss_pred CCCceeeeEEe-CC-eEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEe----CCC-
Q psy11539 179 ENNLPLGIGIW-RS-TIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVD----KCD- 251 (530)
Q Consensus 179 ~n~iP~GV~v~-~g-RlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID----~cg- 251 (530)
....|.++.++ +| ++|++- + .| +|..|+....... .+.-.+ .=..+.++.++ .+|
T Consensus 195 ~g~~p~~v~~SpDGr~lyv~~-~--dg---~V~viD~~~~t~~-~v~~i~-----------~G~~P~~ia~s~~~~pDGk 256 (567)
T 1qks_A 195 TGYAVHISRLSASGRYLFVIG-R--DG---KVNMIDLWMKEPT-TVAEIK-----------IGSEARSIETSKMEGWEDK 256 (567)
T ss_dssp CSSCEEEEEECTTSCEEEEEE-T--TS---EEEEEETTSSSCC-EEEEEE-----------CCSEEEEEEECCSTTCTTT
T ss_pred CCCCccceEECCCCCEEEEEc-C--CC---eEEEEECCCCCCc-EeEEEe-----------cCCCCceeEEccccCCCCC
Confidence 34457788886 44 577764 2 33 7888886310100 111000 01245677777 255
Q ss_pred cEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCccc-----------------------------------
Q psy11539 252 RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQV----------------------------------- 296 (530)
Q Consensus 252 RLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~----------------------------------- 296 (530)
+|||.... ++.|.+||..|.++++++.......
T Consensus 257 ~l~v~n~~------------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~ 324 (567)
T 1qks_A 257 YAIAGAYW------------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILL 324 (567)
T ss_dssp EEEEEEEE------------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEE
T ss_pred EEEEEEcc------------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEE
Confidence 57776543 2457788887877777776532000
Q ss_pred --------------ccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEcCC-CCCcCCCcceeeecCeE
Q psy11539 297 --------------FEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHP-YMYPEPTQSTYILDNLK 361 (530)
Q Consensus 297 --------------~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~h~-sf~pdP~~~~f~I~G~~ 361 (530)
..+.++.++.+| +++.|+|+++.+...|.|+|.++++.-....- .-.|.|..
T Consensus 325 vd~~~~~~~~v~~i~~~~~~~d~~~~----pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~--------- 391 (567)
T 1qks_A 325 VDYTDLNNLKTTEISAERFLHDGGLD----GSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGR--------- 391 (567)
T ss_dssp EETTCSSEEEEEEEECCSSEEEEEEC----TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTT---------
T ss_pred EecCCCccceeeeeeccccccCceEC----CCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcc---------
Confidence 011233344444 67889999999999999999999964332211 11122110
Q ss_pred eeecCCcccee-cCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEe-CCCCeeEEEecchhcCccccCC
Q psy11539 362 FRWVDGIFGMA-ISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHS-MSSNRHYYVSTTDLRNSSRYVN 439 (530)
Q Consensus 362 f~~~dGi~GIA-Lsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~p-lsS~~lY~V~T~~Lrn~s~~~~ 439 (530)
|+. .+|+ ++.+|+.+ +.+..+-.|+|+--+...
T Consensus 392 --------g~~~~~p~---------------------------------~g~v~~t~~~g~~~Vsvid~~~~~~~~---- 426 (567)
T 1qks_A 392 --------GANFVHPT---------------------------------FGPVWATSHMGDDSVALIGTDPEGHPD---- 426 (567)
T ss_dssp --------CEEEEETT---------------------------------TEEEEEEEBSSSSEEEEEECCTTTCTT----
T ss_pred --------ceeeECCC---------------------------------CCcEEEeCCCCCCeEEEecCCCCCCcc----
Confidence 222 1232 35677765 566778888775421111
Q ss_pred ccccccceEEeccccCCCCCcceEEcCCC-cEEEEcc-C-----CCeEEEEeCCCCcc---ccCceeEEeec-----CCc
Q psy11539 440 SSDIDEYFHYLGSRFKNTQASASAINSNG-VMFYNLV-T-----KHSVGCWNTKTKVY---LPQTQDIVQTS-----RDI 504 (530)
Q Consensus 440 ~~~~~~~v~~lG~rG~~sqs~G~aiD~~G-~LYft~~-~-----~~aI~cWnt~~~~~---~~~n~~lV~~d-----~~~ 504 (530)
...+.++.+--.| ..+-.+.+..+| .||+... + .++|..+|..+... .. -++++-.. .+.
T Consensus 427 --~~~kvv~~i~~~g--~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~-~~~~~~~~~~~~~~~~ 501 (567)
T 1qks_A 427 --NAWKILDSFPALG--GGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDP-EFKTLPIAEWAGITEG 501 (567)
T ss_dssp --TBTSEEEEEECSC--SCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCC-CEEEECHHHHHTCCSS
T ss_pred --ccCEEEEEEecCC--CCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCC-CcEEeccccccccCCC
Confidence 1122333332112 123446667555 6777663 3 35899999872100 11 12344110 112
Q ss_pred eeecceeEEecCC-cEEEEE
Q psy11539 505 LNFREEGEEEEEK-ENTCTF 523 (530)
Q Consensus 505 L~~Pd~l~Id~dG-~lYv~~ 523 (530)
-..|-.+.+..+| ++||.+
T Consensus 502 ~~~~~~~~~~~~G~~~~~s~ 521 (567)
T 1qks_A 502 QPRVVQGEFNKDGTEVWFSV 521 (567)
T ss_dssp CCEEEEEEECTTSSEEEEEE
T ss_pred CcceEeeeECCCCCEEEEEe
Confidence 3467788998888 566543
No 124
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.94 E-value=0.083 Score=54.89 Aligned_cols=63 Identities=8% Similarity=0.002 Sum_probs=42.2
Q ss_pred CCCcceEEc-CCCcEEEEccCCCeEEEEeCCC-CccccCceeEEee-cCCcee-ecceeEEe--cC--CcEEEEE
Q psy11539 457 TQASASAIN-SNGVMFYNLVTKHSVGCWNTKT-KVYLPQTQDIVQT-SRDILN-FREEGEEE--EE--KENTCTF 523 (530)
Q Consensus 457 sqs~G~aiD-~~G~LYft~~~~~aI~cWnt~~-~~~~~~n~~lV~~-d~~~L~-~Pd~l~Id--~d--G~lYv~~ 523 (530)
+|+.|+++| ..|.||+++-. .+|++++.+- +.. ...+|.. ....|. =+.||++. .+ |+|++.+
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~---~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGS---NGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCS---CCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred CCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCC---CceEEEEecCCccccCcceEEEEecCCCCEEEEEEc
Confidence 689999999 78999999987 5699999430 222 1234432 224455 68999995 33 5566655
No 125
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.94 E-value=0.018 Score=59.37 Aligned_cols=168 Identities=11% Similarity=0.015 Sum_probs=98.0
Q ss_pred ccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCccc
Q psy11539 300 SLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSG 379 (530)
Q Consensus 300 S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~ 379 (530)
...-.|+++ .++.+||++...+.|.+++..+++.-.+..- |+ .+ ..| ..|++|||++|+-
T Consensus 32 ~~P~~ia~~-----pdG~llVter~~G~I~~v~~~~g~~~~v~~~---~~----v~-~~g-----~~GllGia~~Pdf-- 91 (347)
T 3das_A 32 NSPWGLAPL-----PGGDLLVSSRDEATITRVDAKTGRKTELGEV---PG----VS-PSG-----EGGLLGIALSPDY-- 91 (347)
T ss_dssp SSEEEEEEC-----TTSCEEEEETTTCEEEEECTTTCCEEEEEEC---TT----CC-CBT-----TBSEEEEEECTTH--
T ss_pred CCceEEEEc-----CCCcEEEEEecCCEEEEEECCCCcEeeeccc---Cc----ee-ecC-----CCCceeeEecccc--
Confidence 344567776 4667899987666788887766654333210 00 00 111 2478999999962
Q ss_pred ccccCCCcccccccccccCCccccccccCCCceEEE--EeCCCCeeEEEecchhc--CccccCCccccccceEEeccccC
Q psy11539 380 YKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYF--HSMSSNRHYYVSTTDLR--NSSRYVNSSDIDEYFHYLGSRFK 455 (530)
Q Consensus 380 ~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf--~plsS~~lY~V~T~~Lr--n~s~~~~~~~~~~~v~~lG~rG~ 455 (530)
..+++||+ +.-+..++++...+--. ...+. +...-+..+.. +.
T Consensus 92 ----------------------------~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~----~~~~i~~~~p~-~~ 138 (347)
T 3das_A 92 ----------------------------ASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLG----APDTVFRGIPK-GV 138 (347)
T ss_dssp ----------------------------HHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBC----CCEEEEEEECC-CS
T ss_pred ----------------------------ccCCEEEEEEecCCCCEEEEEEeCCCCcccccCC----CcEEEEEcCCC-CC
Confidence 01255665 44566778777532200 00110 11111222221 11
Q ss_pred CCCCcceEEcCCCcEEEEcc-------------CCCeEEEEeCCCCccccCc----eeEEeecCCceeecceeEEecCCc
Q psy11539 456 NTQASASAINSNGVMFYNLV-------------TKHSVGCWNTKTKVYLPQT----QDIVQTSRDILNFREEGEEEEEKE 518 (530)
Q Consensus 456 ~sqs~G~aiD~~G~LYft~~-------------~~~aI~cWnt~~~~~~~~n----~~lV~~d~~~L~~Pd~l~Id~dG~ 518 (530)
.-....++++.+|.||++.- ...+|.+.+++ +...+.| .++.+. .+.-|-||+++.+|.
T Consensus 139 ~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip~~nPf~~~~i~a~---G~RNp~Gla~dp~G~ 214 (347)
T 3das_A 139 IHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEPAPGNPFPGSPVYSY---GHRNVQGLAWDDKQR 214 (347)
T ss_dssp SCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSBCTTCSSTTCCEEEB---CCSBCCEEEECTTCC
T ss_pred CccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCccCCCCCCCCeEEee---CCCCcceEEECCCCC
Confidence 12366799999999999952 46899999998 6432221 233332 466789999999999
Q ss_pred EEEEEe
Q psy11539 519 NTCTFL 524 (530)
Q Consensus 519 lYv~~~ 524 (530)
||+...
T Consensus 215 L~~~d~ 220 (347)
T 3das_A 215 LFASEF 220 (347)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999765
No 126
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.93 E-value=0.012 Score=65.08 Aligned_cols=259 Identities=12% Similarity=0.127 Sum_probs=144.7
Q ss_pred CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEe---CCCcEEEEeCCCCCcc--
Q psy11539 190 RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVD---KCDRLWIMDTGVTNIL-- 264 (530)
Q Consensus 190 ~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID---~cgRLWVLDtG~~~~~-- 264 (530)
..++||+-.. -.+|++|+.....+.-.+ .-|+ -..+.++.+. .-++||+-.-..+-..
T Consensus 101 G~~lfVnd~~-----~~rVavIdl~t~~~~~ii-~ip~-----------g~~phg~~~~~~p~~~~v~~~~~~~~p~~~d 163 (595)
T 1fwx_A 101 GRFLFMNDKA-----NTRVARVRCDVMKCDAIL-EIPN-----------AKGIHGLRPQKWPRSNYVFCNGEDETPLVND 163 (595)
T ss_dssp EEEEEEEETT-----TTEEEEEETTTTEEEEEE-ECSS-----------CCSEEEEEECCSSBCSEEEEEECSCEESSCS
T ss_pred CCEEEEEcCC-----CCEEEEEECCCceEeeEE-eCCC-----------CCCCcceeeeecCCCcEEEEecccccccCCC
Confidence 3679998532 237999997643211111 2232 1345676763 2556777753322000
Q ss_pred cCc---cccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCC--------------Ce
Q psy11539 265 SSI---QQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR--------------YG 327 (530)
Q Consensus 265 ~~~---~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~--------------~g 327 (530)
|.. ...-.-.+-++|.+|.+++.++..+.+ +..++++ -++.+||+|.... ..
T Consensus 164 g~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~-------pd~~~~s----pdGk~~~vt~~~se~~~~i~~~~~~~~d~ 232 (595)
T 1fwx_A 164 GTNMEDVANYVNVFTAVDADKWEVAWQVLVSGN-------LDNCDAD----YEGKWAFSTSYNSEKGMTLPEMTAAEMDH 232 (595)
T ss_dssp SSSTTCGGGEEEEEEEEETTTTEEEEEEEESSC-------CCCEEEC----SSSSEEEEEESCTTCCSSHHHHTCCSEEE
T ss_pred CcccccccccCceEEEEECCCCeEEEEEEeCCC-------ccceEEC----CCCCEEEEEecCcccCcchhhccccccce
Confidence 000 011223588999999999999888542 4566676 3588999998664 45
Q ss_pred EEEEEccCCeEEEEcCC-CCCcCCCcceeeecCeE------e-eec--CCccceecCCCcccccccCCCccccccccccc
Q psy11539 328 LIVYDFFKNTSYRLTHP-YMYPEPTQSTYILDNLK------F-RWV--DGIFGMAISPELSGYKYKRHPYEYYHYNVHHY 397 (530)
Q Consensus 328 LIVyDl~~g~swRv~h~-sf~pdP~~~~f~I~G~~------f-~~~--dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~ 397 (530)
|.|+|..+.... +... ..+. .+.-.|++.. . ..+ ...-||
T Consensus 233 v~V~~~~~~~~~-v~~Gk~~~i---~~V~VID~~~~~~~~~~~~Ipvg~~PhGv-------------------------- 282 (595)
T 1fwx_A 233 IVVFNIAEIEKA-IAAGDYQEL---NGVKVVDGRKEASSLFTRYIPIANNPHGC-------------------------- 282 (595)
T ss_dssp EEEEEHHHHHHH-HHHTCSEEE---TTEEEEECSGGGCCSSEEEEEEESSCCCE--------------------------
T ss_pred EEEeeccceeEe-ccCCCeeEE---CcEEEEeCcccCCceeEEEEecCCCceEE--------------------------
Confidence 888887654320 0000 0000 0011111111 0 000 112233
Q ss_pred CCccccccccCCCceEEEEeCCCCeeEEEecchhc---CccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEc
Q psy11539 398 NGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLR---NSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNL 474 (530)
Q Consensus 398 ~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lr---n~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~ 474 (530)
.++.+++++|-+-+.+.++..++++-++ +..+.. .......+ .+| ..+.++++|.+|++|.+.
T Consensus 283 -------~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~-~~~v~~~v-~vG-----~gP~h~aF~~dG~aY~t~ 348 (595)
T 1fwx_A 283 -------NMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADP-RSAVVAEP-ELG-----LGPLHTAFDGRGNAYTSL 348 (595)
T ss_dssp -------EECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCG-GGGEEECC-BCC-----SCEEEEEECTTSEEEEEE
T ss_pred -------EEcCCCCEEEEeCCCCCeEEEEECcccccccccccCc-ccceEEEc-CCC-----CCcceEEECCCCeEEEEE
Confidence 3455569999999999999999988654 222211 01111111 223 348899999999999999
Q ss_pred cCCCeEEEEeCCCCc---cccCc-eeEEeecC-----CceeecceeEEecCC-cEEE
Q psy11539 475 VTKHSVGCWNTKTKV---YLPQT-QDIVQTSR-----DILNFREEGEEEEEK-ENTC 521 (530)
Q Consensus 475 ~~~~aI~cWnt~~~~---~~~~n-~~lV~~d~-----~~L~~Pd~l~Id~dG-~lYv 521 (530)
-..+.|..||.+ +. |.-+. ..+|..-+ ..+.+.-|+.+..|| +||+
T Consensus 349 ~ldsqV~kwdi~-~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 349 FLDSQVVKWNIE-DAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp TTTTEEEEEEHH-HHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEE
T ss_pred ecCCcEEEEEhh-HhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEE
Confidence 999999999987 41 10001 12333211 226677888888888 5554
No 127
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.90 E-value=0.055 Score=53.46 Aligned_cols=78 Identities=12% Similarity=0.056 Sum_probs=55.8
Q ss_pred eEEEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEEECC-CCcEEE--EEECCCcccccCccccceEEEeecCCCC
Q psy11539 240 ISVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLK-TNTLIR--KYILPTAQVFEGSLFSNIVTEVVEDCDH 315 (530)
Q Consensus 240 vSV~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~-Td~li~--~y~~P~~v~~~~S~lndIvVDv~~~c~~ 315 (530)
..+..+.++++|+ |++.|.|. -+|.+||+. ++++.. .+.++. .+.....++++ .++
T Consensus 145 ~~~~~~~~spdG~~l~~~~~~~------------~~v~~~~~~~~g~~~~~~~~~~~~----~g~~p~~~~~s----pdg 204 (365)
T 1jof_A 145 TGIHGMVFDPTETYLYSADLTA------------NKLWTHRKLASGEVELVGSVDAPD----PGDHPRWVAMH----PTG 204 (365)
T ss_dssp CCEEEEEECTTSSEEEEEETTT------------TEEEEEEECTTSCEEEEEEEECSS----TTCCEEEEEEC----TTS
T ss_pred CcceEEEECCCCCEEEEEcCCC------------CEEEEEEECCCCCEEEeeeEecCC----CCCCCCEeEEC----CCC
Confidence 3577889999886 88889774 359999998 787643 333321 13456778887 356
Q ss_pred eEEEEecCCCCeEEEEEcc--CCe
Q psy11539 316 VFAYVNDVFRYGLIVYDFF--KNT 337 (530)
Q Consensus 316 ~~AYItDsg~~gLIVyDl~--~g~ 337 (530)
.++|+++.....|.||++. +|+
T Consensus 205 ~~l~v~~~~~~~v~v~~~~~~~g~ 228 (365)
T 1jof_A 205 NYLYALMEAGNRICEYVIDPATHM 228 (365)
T ss_dssp SEEEEEETTTTEEEEEEECTTTCC
T ss_pred CEEEEEECCCCeEEEEEEeCCCCc
Confidence 6999999887888888765 564
No 128
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.88 E-value=0.034 Score=56.70 Aligned_cols=68 Identities=15% Similarity=0.008 Sum_probs=49.2
Q ss_pred CcEEEEeC-CCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC-----
Q psy11539 251 DRLWIMDT-GVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF----- 324 (530)
Q Consensus 251 gRLWVLDt-G~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg----- 324 (530)
.++||.|. |.... . .|.+||+.+++++.++... ... .|++. .++.++|+++..
T Consensus 33 ~~~yv~~~~~~~~~------~---~v~v~D~~t~~~~~~i~~g-------~~p-~i~~s----pDg~~lyv~n~~~~~~~ 91 (373)
T 2mad_H 33 RRSYINLPAHHSAI------I---QQWVLDAGSGSILGHVNGG-------FLP-NPVAA----HSGSEFALASTSFSRIA 91 (373)
T ss_pred CEEEEeCCcccCCc------c---EEEEEECCCCeEEEEecCC-------CCC-CeEEC----CCCCEEEEEeccccccc
Confidence 57999998 54221 1 6999999999998765542 223 77886 367899999852
Q ss_pred ----CCeEEEEEccCCeEE
Q psy11539 325 ----RYGLIVYDFFKNTSY 339 (530)
Q Consensus 325 ----~~gLIVyDl~~g~sw 339 (530)
...|.|||..+.+..
T Consensus 92 rg~~~~~v~viD~~t~~~~ 110 (373)
T 2mad_H 92 KGKRTDYVEVFDPVTFLPI 110 (373)
T ss_pred cCCCCCeEEEEECCCCcEE
Confidence 356889999877554
No 129
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.85 E-value=0.086 Score=58.23 Aligned_cols=184 Identities=8% Similarity=0.027 Sum_probs=112.9
Q ss_pred CcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEec--------
Q psy11539 251 DRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVND-------- 322 (530)
Q Consensus 251 gRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItD-------- 322 (530)
.+|||.|.+. .+|-++||++.++++.+.+|.. .....+++.-. .+.+++|++.
T Consensus 102 ~~lfVnd~~~------------~rVavIdl~t~~~~~ii~ip~g-----~~phg~~~~~~--p~~~~v~~~~~~~~p~~~ 162 (595)
T 1fwx_A 102 RFLFMNDKAN------------TRVARVRCDVMKCDAILEIPNA-----KGIHGLRPQKW--PRSNYVFCNGEDETPLVN 162 (595)
T ss_dssp EEEEEEETTT------------TEEEEEETTTTEEEEEEECSSC-----CSEEEEEECCS--SBCSEEEEEECSCEESSC
T ss_pred CEEEEEcCCC------------CEEEEEECCCceEeeEEeCCCC-----CCCcceeeeec--CCCcEEEEecccccccCC
Confidence 3699999875 5699999999999998888753 33556676411 2578899984
Q ss_pred ---------CCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccc
Q psy11539 323 ---------VFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYN 393 (530)
Q Consensus 323 ---------sg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~ 393 (530)
.....+-|+|.++.+-- ..+.++| ...|+++||++
T Consensus 163 dg~~l~~~~~~~~~vtvID~~t~~v~-------------~qI~Vgg-------~pd~~~~spdG---------------- 206 (595)
T 1fwx_A 163 DGTNMEDVANYVNVFTAVDADKWEVA-------------WQVLVSG-------NLDNCDADYEG---------------- 206 (595)
T ss_dssp SSSSTTCGGGEEEEEEEEETTTTEEE-------------EEEEESS-------CCCCEEECSSS----------------
T ss_pred CCcccccccccCceEEEEECCCCeEE-------------EEEEeCC-------CccceEECCCC----------------
Confidence 22346778887765321 1233333 12477888876
Q ss_pred ccccCCccccccccCCCceEEEEeCCCCe-------------------------------------eEEEecchhcCccc
Q psy11539 394 VHHYNGTNVDKTIRDDQRYMYFHSMSSNR-------------------------------------HYYVSTTDLRNSSR 436 (530)
Q Consensus 394 ~~~~~~~~~~~~~~~~~r~LYf~plsS~~-------------------------------------lY~V~T~~Lrn~s~ 436 (530)
+++|.+.-.|.. +-.|+++-.+
T Consensus 207 -----------------k~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~---- 265 (595)
T 1fwx_A 207 -----------------KWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEA---- 265 (595)
T ss_dssp -----------------SEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGG----
T ss_pred -----------------CEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccC----
Confidence 555555544421 2222221110
Q ss_pred cCCccccccc-eEEeccccCCCCCcceEEcCCCc-EEEEccCCCeEEEEeCCCCc-------cccCceeEEeecCCceee
Q psy11539 437 YVNSSDIDEY-FHYLGSRFKNTQASASAINSNGV-MFYNLVTKHSVGCWNTKTKV-------YLPQTQDIVQTSRDILNF 507 (530)
Q Consensus 437 ~~~~~~~~~~-v~~lG~rG~~sqs~G~aiD~~G~-LYft~~~~~aI~cWnt~~~~-------~~~~n~~lV~~d~~~L~~ 507 (530)
... +..+- -| .++-|+.++.+|. +|+++...+.|..+|.. +- +++. ..++++ -+-=.-
T Consensus 266 -------~~~~~~~Ip-vg--~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~-~~~~~~~~~l~~~-~~v~~~-v~vG~g 332 (595)
T 1fwx_A 266 -------SSLFTRYIP-IA--NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVT-RFDAVFYENADPR-SAVVAE-PELGLG 332 (595)
T ss_dssp -------CCSSEEEEE-EE--SSCCCEEECTTSSEEEEECTTSSBEEEEEGG-GHHHHHHSCCCGG-GGEEEC-CBCCSC
T ss_pred -------CceeEEEEe-cC--CCceEEEEcCCCCEEEEeCCCCCeEEEEECc-ccccccccccCcc-cceEEE-cCCCCC
Confidence 001 11111 11 2689999998876 89999999999999998 32 2221 223332 222235
Q ss_pred cceeEEecCCcEEEEE
Q psy11539 508 REEGEEEEEKENTCTF 523 (530)
Q Consensus 508 Pd~l~Id~dG~lYv~~ 523 (530)
|-+++++.+|++|++.
T Consensus 333 P~h~aF~~dG~aY~t~ 348 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSL 348 (595)
T ss_dssp EEEEEECTTSEEEEEE
T ss_pred cceEEECCCCeEEEEE
Confidence 8899999999998864
No 130
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.85 E-value=0.25 Score=46.16 Aligned_cols=153 Identities=13% Similarity=0.184 Sum_probs=88.4
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.+..+....++++.+.=.. .-.|.+||+++++.++++.-. ...+..+.+. .++.+++.
T Consensus 143 ~i~~~~~~~~~~~l~~~~~------------dg~v~~~d~~~~~~~~~~~~~------~~~i~~~~~~----~~~~~l~~ 200 (337)
T 1gxr_A 143 ACYALAISPDSKVCFSCCS------------DGNIAVWDLHNQTLVRQFQGH------TDGASCIDIS----NDGTKLWT 200 (337)
T ss_dssp CEEEEEECTTSSEEEEEET------------TSCEEEEETTTTEEEEEECCC------SSCEEEEEEC----TTSSEEEE
T ss_pred ceEEEEECCCCCEEEEEeC------------CCcEEEEeCCCCceeeeeecc------cCceEEEEEC----CCCCEEEE
Confidence 4666777777665443111 123999999999988876542 2335556664 23445555
Q ss_pred ecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCc
Q psy11539 321 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGT 400 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~ 400 (530)
+. ..+.|.+||+++++.-+... ....+..++++|++
T Consensus 201 ~~-~dg~i~~~d~~~~~~~~~~~--------------------~~~~v~~~~~s~~~----------------------- 236 (337)
T 1gxr_A 201 GG-LDNTVRSWDLREGRQLQQHD--------------------FTSQIFSLGYCPTG----------------------- 236 (337)
T ss_dssp EE-TTSEEEEEETTTTEEEEEEE--------------------CSSCEEEEEECTTS-----------------------
T ss_pred Ee-cCCcEEEEECCCCceEeeec--------------------CCCceEEEEECCCC-----------------------
Confidence 44 45689999999886544321 11234467777765
Q ss_pred cccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeE
Q psy11539 401 NVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSV 480 (530)
Q Consensus 401 ~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI 480 (530)
+.|+.....+ .++..+... .. ..+..+.. .....++++.+|.++++....+.|
T Consensus 237 ----------~~l~~~~~~~-~i~~~~~~~---~~----------~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg~i 289 (337)
T 1gxr_A 237 ----------EWLAVGMESS-NVEVLHVNK---PD----------KYQLHLHE---SCVLSLKFAYCGKWFVSTGKDNLL 289 (337)
T ss_dssp ----------SEEEEEETTS-CEEEEETTS---SC----------EEEECCCS---SCEEEEEECTTSSEEEEEETTSEE
T ss_pred ----------CEEEEEcCCC-cEEEEECCC---CC----------eEEEcCCc---cceeEEEECCCCCEEEEecCCCcE
Confidence 3444333222 233332211 00 11122221 245667888888888888888999
Q ss_pred EEEeCC
Q psy11539 481 GCWNTK 486 (530)
Q Consensus 481 ~cWnt~ 486 (530)
..||..
T Consensus 290 ~~~~~~ 295 (337)
T 1gxr_A 290 NAWRTP 295 (337)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999987
No 131
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.83 E-value=0.033 Score=61.34 Aligned_cols=188 Identities=11% Similarity=0.036 Sum_probs=107.8
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
..|+.+..|..|+|||--.+ -.|..||.+++++. .+..+ . .....+..|..| .++.+|
T Consensus 407 ~~v~~i~~d~~g~lWigt~~-------------~Gl~~~~~~~~~~~-~~~~~-~--~~~~~v~~i~~d-----~~g~lw 464 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWFGTYL-------------GNISYYNTRLKKFQ-IIELE-K--NELLDVRVFYED-----KNKKIW 464 (781)
T ss_dssp SBEEEEEECTTSCEEEEETT-------------EEEEEECSSSCEEE-ECCST-T--TCCCCEEEEEEC-----TTSEEE
T ss_pred cceEEEEECCCCCEEEEecc-------------CCEEEEcCCCCcEE-EeccC-C--CCCCeEEEEEEC-----CCCCEE
Confidence 35888999999999995322 12999999887654 34332 1 122345566666 578899
Q ss_pred EecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCC
Q psy11539 320 VNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNG 399 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~ 399 (530)
|+-. .||.+||..+++..++.... .. .. ...-+..|+.+++
T Consensus 465 igt~--~Gl~~~~~~~~~~~~~~~~~---~~---~~--------~~~~i~~i~~d~~----------------------- 505 (781)
T 3v9f_A 465 IGTH--AGVFVIDLASKKVIHHYDTS---NS---QL--------LENFVRSIAQDSE----------------------- 505 (781)
T ss_dssp EEET--TEEEEEESSSSSCCEEECTT---TS---SC--------SCSCEEEEEECTT-----------------------
T ss_pred EEEC--CceEEEeCCCCeEEecccCc---cc---cc--------ccceeEEEEEcCC-----------------------
Confidence 9865 69999999988655543211 00 00 0012334544443
Q ss_pred ccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEec-cccC-CCCCcceEEcCCCcEEEEccCC
Q psy11539 400 TNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLG-SRFK-NTQASASAINSNGVMFYNLVTK 477 (530)
Q Consensus 400 ~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG-~rG~-~sqs~G~aiD~~G~LYft~~~~ 477 (530)
..|++....+ -+|+++..- ..++.+. ..|. .....++..|++|.|+++..
T Consensus 506 -----------g~lWigt~~~-Gl~~~~~~~--------------~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-- 557 (781)
T 3v9f_A 506 -----------GRFWIGTFGG-GVGIYTPDM--------------QLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-- 557 (781)
T ss_dssp -----------CCEEEEESSS-CEEEECTTC--------------CEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--
T ss_pred -----------CCEEEEEcCC-CEEEEeCCC--------------CeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--
Confidence 3566665522 266664211 0122221 1111 12345678899999999976
Q ss_pred CeE-EEEeCCCCccccCceeEEeecCCce--eecceeEEecCCcEEEE
Q psy11539 478 HSV-GCWNTKTKVYLPQTQDIVQTSRDIL--NFREEGEEEEEKENTCT 522 (530)
Q Consensus 478 ~aI-~cWnt~~~~~~~~n~~lV~~d~~~L--~~Pd~l~Id~dG~lYv~ 522 (530)
+++ .+||+.++.+. .....+ .| ....++..|.+|+||+.
T Consensus 558 ~Glv~~~d~~~~~~~-----~~~~~~-gl~~~~i~~i~~d~~g~lW~~ 599 (781)
T 3v9f_A 558 EGLVCFPSARNFDYQ-----VFQRKE-GLPNTHIRAISEDKNGNIWAS 599 (781)
T ss_dssp TEEEEESCTTTCCCE-----EECGGG-TCSCCCCCEEEECSSSCEEEE
T ss_pred CCceEEECCCCCcEE-----EccccC-CCCCceEEEEEECCCCCEEEE
Confidence 578 99999744442 221111 11 12357888889988874
No 132
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.70 E-value=0.13 Score=49.06 Aligned_cols=174 Identities=9% Similarity=0.001 Sum_probs=94.0
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+....++++.+.=.. + -.|.+||+.+++....+.+... ...+..+.+. .++.+++.
T Consensus 54 ~v~~~~~~~~~~~l~~~~~--d----------g~i~vwd~~~~~~~~~~~~~~~----~~~v~~~~~~----~~~~~l~~ 113 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGT--D----------RNAYVWTLKGRTWKPTLVILRI----NRAARCVRWA----PNEKKFAV 113 (372)
T ss_dssp CEEEEEEETTTTEEEEEET--T----------SCEEEEEEETTEEEEEEECCCC----SSCEEEEEEC----TTSSEEEE
T ss_pred cccEEEEeCCCCEEEEEcC--C----------CeEEEEECCCCeeeeeEEeecC----CCceeEEEEC----CCCCEEEE
Confidence 4667777777776554211 1 2499999999988777776332 3345566664 23455555
Q ss_pred ecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCc
Q psy11539 321 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGT 400 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~ 400 (530)
+. ....|.+||+.+++.|.+......+. ...+..|+++|++
T Consensus 114 ~~-~d~~v~i~d~~~~~~~~~~~~~~~~~---------------~~~i~~~~~~~~~----------------------- 154 (372)
T 1k8k_C 114 GS-GSRVISICYFEQENDWWVCKHIKKPI---------------RSTVLSLDWHPNS----------------------- 154 (372)
T ss_dssp EE-TTSSEEEEEEETTTTEEEEEEECTTC---------------CSCEEEEEECTTS-----------------------
T ss_pred Ee-CCCEEEEEEecCCCcceeeeeeeccc---------------CCCeeEEEEcCCC-----------------------
Confidence 54 34679999999887554432111110 1234567777764
Q ss_pred cccccccCCCceEEEEeCCC-CeeEEEecchhcCccccCCc---cccccceEEe-ccccCCCCCcceEEcCCCcEEEEcc
Q psy11539 401 NVDKTIRDDQRYMYFHSMSS-NRHYYVSTTDLRNSSRYVNS---SDIDEYFHYL-GSRFKNTQASASAINSNGVMFYNLV 475 (530)
Q Consensus 401 ~~~~~~~~~~r~LYf~plsS-~~lY~V~T~~Lrn~s~~~~~---~~~~~~v~~l-G~rG~~sqs~G~aiD~~G~LYft~~ 475 (530)
+.|+.....+ .++|.+.+..+......... ......+..+ +.. .....++++.+|.++++..
T Consensus 155 ----------~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~ 221 (372)
T 1k8k_C 155 ----------VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC---GWVHGVCFSANGSRVAWVS 221 (372)
T ss_dssp ----------SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS---SCEEEEEECSSSSEEEEEE
T ss_pred ----------CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC---CeEEEEEECCCCCEEEEEe
Confidence 2333322221 12333322222111100000 0011222233 222 2456778888888888888
Q ss_pred CCCeEEEEeCC
Q psy11539 476 TKHSVGCWNTK 486 (530)
Q Consensus 476 ~~~aI~cWnt~ 486 (530)
..+.|..||..
T Consensus 222 ~d~~i~i~d~~ 232 (372)
T 1k8k_C 222 HDSTVCLADAD 232 (372)
T ss_dssp TTTEEEEEEGG
T ss_pred CCCEEEEEECC
Confidence 88999999987
No 133
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.67 E-value=0.008 Score=62.10 Aligned_cols=71 Identities=8% Similarity=-0.187 Sum_probs=53.8
Q ss_pred CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecC------
Q psy11539 250 CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV------ 323 (530)
Q Consensus 250 cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs------ 323 (530)
-.|+||.+.+.-.. .. .|.++|+.|+++++++..+.. . .|++. -++.++|+++.
T Consensus 31 ~~~~yV~~~~~~~~-------~d-~vsvID~~t~~v~~~i~vG~~-------P-~i~~s----pDg~~lyVan~~~~r~~ 90 (368)
T 1mda_H 31 SRRSHITLPAYFAG-------TT-ENWVSCAGCGVTLGHSLGAFL-------S-LAVAG----HSGSDFALASTSFARSA 90 (368)
T ss_dssp TTEEEEEECTTTCS-------SE-EEEEEETTTTEEEEEEEECTT-------C-EEEEC----TTSSCEEEEEEEETTTT
T ss_pred CCeEEEECCccCCc-------cc-eEEEEECCCCeEEEEEeCCCC-------C-ceEEC----CCCCEEEEEcccccccc
Confidence 36899999975321 11 699999999999999988542 2 57776 36889999995
Q ss_pred ---CCCeEEEEEccCCeEEE
Q psy11539 324 ---FRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 324 ---g~~gLIVyDl~~g~swR 340 (530)
....|-|+|..+++--+
T Consensus 91 ~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 91 KGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp SSSEEEEEEEECTTTCCEEE
T ss_pred cCCCCCEEEEEECCCCCEEE
Confidence 24679999999986543
No 134
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.66 E-value=0.21 Score=49.59 Aligned_cols=73 Identities=10% Similarity=0.027 Sum_probs=45.0
Q ss_pred EEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecC
Q psy11539 244 RMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV 323 (530)
Q Consensus 244 rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs 323 (530)
.+.+-++|++-++=+|..+ -.|.+||+++++.+..+.-.. -..+|++. + ++.-.|..+
T Consensus 138 ~v~fSpDg~~la~as~~~d----------~~i~iwd~~~~~~~~~~~~~~-------~V~~v~fs--p-dg~~l~s~s-- 195 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKVP----------AIMRIIDPSDLTEKFEIETRG-------EVKDLHFS--T-DGKVVAYIT-- 195 (365)
T ss_dssp EEEECTTSSCEEEEESCSS----------CEEEEEETTTTEEEEEEECSS-------CCCEEEEC--T-TSSEEEEEC--
T ss_pred EEEEcCCCCEEEEEECCCC----------CEEEEeECCCCcEEEEeCCCC-------ceEEEEEc--c-CCceEEecc--
Confidence 3556667776666555432 358899999999888765422 24566664 1 123334444
Q ss_pred CCCeEEEEEccCCeEE
Q psy11539 324 FRYGLIVYDFFKNTSY 339 (530)
Q Consensus 324 g~~gLIVyDl~~g~sw 339 (530)
..++++|+..+++.-
T Consensus 196 -~~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 196 -GSSLEVISTVTGSCI 210 (365)
T ss_dssp -SSCEEEEETTTCCEE
T ss_pred -ceeEEEEEeccCcce
Confidence 346888888887543
No 135
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=96.32 E-value=0.073 Score=57.13 Aligned_cols=144 Identities=10% Similarity=0.034 Sum_probs=83.4
Q ss_pred ceeeeEEeCCeEEEEccCCCC-CCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEeCCC-cEEEEeCC
Q psy11539 182 LPLGIGIWRSTIFLSFPKWKA-GIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCD-RLWIMDTG 259 (530)
Q Consensus 182 iP~GV~v~~gRlFVTiPR~~~-GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cg-RLWVLDtG 259 (530)
-|.++...-+.||||...=.. +-|-+|..++..+.. .+.-++. . .... .-.|.+..-..+ .|.+-+=|
T Consensus 139 ~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~---v~~~~~~---~--~~~~--~~~Yd~~~~p~~~~mvsS~wg 208 (462)
T 2ece_A 139 RLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFE---PLGKWEI---D--RGDQ--YLAYDFWWNLPNEVLVSSEWA 208 (462)
T ss_dssp EEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCC---EEEECCS---B--CTTC--CCCCCEEEETTTTEEEECBCC
T ss_pred cccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCe---EEEEEcc---C--CCCc--cccceEEECCCCCEEEEccCc
Confidence 577777763339998766432 235688888865432 2322221 1 0111 112233333333 45555645
Q ss_pred CCCcccCc--cc----cCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecC-----CCCeE
Q psy11539 260 VTNILSSI--QQ----LCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV-----FRYGL 328 (530)
Q Consensus 260 ~~~~~~~~--~~----~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs-----g~~gL 328 (530)
.+...... .+ ...-+|.+||+.++++++++.++.. ++....|++... -++.+||++.. ....|
T Consensus 209 ~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~----g~~P~~i~f~~~--Pdg~~aYV~~e~~~~~Lss~V 282 (462)
T 2ece_A 209 VPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE----NRMALELRPLHD--PTKLMGFINMVVSLKDLSSSI 282 (462)
T ss_dssp CHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT----EEEEEEEEECSS--TTCCEEEEEEEEETTTCCEEE
T ss_pred CccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC----CCccceeEeeEC--CCCCEEEEEEeeeccCCCceE
Confidence 32211100 00 3467899999999999999999632 344456666322 36789999998 88899
Q ss_pred EEEEccCCeEEEEc
Q psy11539 329 IVYDFFKNTSYRLT 342 (530)
Q Consensus 329 IVyDl~~g~swRv~ 342 (530)
.||....| .|...
T Consensus 283 ~v~~~d~g-~~~~~ 295 (462)
T 2ece_A 283 WLWFYEDG-KWNAE 295 (462)
T ss_dssp EEEEEETT-EEEEE
T ss_pred EEEEecCC-ceeEE
Confidence 99998875 45433
No 136
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.13 E-value=0.79 Score=46.48 Aligned_cols=80 Identities=10% Similarity=0.025 Sum_probs=46.5
Q ss_pred EEEEEEeCCCcEE-EEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe-EEE
Q psy11539 242 VFRMSVDKCDRLW-IMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV-FAY 319 (530)
Q Consensus 242 V~rv~ID~cgRLW-VLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~-~AY 319 (530)
+..+...++|+.. ...... +.+.|.+||+++++..+....+ .....+++. .++. .||
T Consensus 181 v~~~~~Spdg~~la~~s~~~----------~~~~i~~~d~~tg~~~~l~~~~-------~~~~~~~~s----pdg~~la~ 239 (415)
T 2hqs_A 181 LMSPAWSPDGSKLAYVTFES----------GRSALVIQTLANGAVRQVASFP-------RHNGAPAFS----PDGSKLAF 239 (415)
T ss_dssp EEEEEECTTSSEEEEEECTT----------SSCEEEEEETTTCCEEEEECCS-------SCEEEEEEC----TTSSEEEE
T ss_pred ceeeEEcCCCCEEEEEEecC----------CCcEEEEEECCCCcEEEeecCC-------CcccCEEEc----CCCCEEEE
Confidence 5666777777533 222110 2367999999999876433221 123445553 2344 444
Q ss_pred EecC-CCCeEEEEEccCCeEEEEc
Q psy11539 320 VNDV-FRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 320 ItDs-g~~gLIVyDl~~g~swRv~ 342 (530)
.... +...|.+||+.+++..++.
T Consensus 240 ~~~~~g~~~i~~~d~~~~~~~~l~ 263 (415)
T 2hqs_A 240 ALSKTGSLNLYVMDLASGQIRQVT 263 (415)
T ss_dssp EECTTSSCEEEEEETTTCCEEECC
T ss_pred EEecCCCceEEEEECCCCCEEeCc
Confidence 5433 3457999999998776544
No 137
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.5 Score=45.58 Aligned_cols=79 Identities=18% Similarity=0.183 Sum_probs=46.4
Q ss_pred EEEEEEEeCCCcEEE-EeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCccc---------ccCccccceEEEee
Q psy11539 241 SVFRMSVDKCDRLWI-MDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQV---------FEGSLFSNIVTEVV 310 (530)
Q Consensus 241 SV~rv~ID~cgRLWV-LDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~---------~~~S~lndIvVDv~ 310 (530)
.|..+....++++.+ .... -.|.+||+.+++.++.+..+.... ...+....+.+.
T Consensus 151 ~v~~~~~~~~~~~l~~~~~d-------------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 215 (425)
T 1r5m_A 151 PIVSVKWNKDGTHIISMDVE-------------NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWV-- 215 (425)
T ss_dssp CEEEEEECTTSSEEEEEETT-------------CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEE--
T ss_pred cEEEEEECCCCCEEEEEecC-------------CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEc--
Confidence 466778877776443 3321 239999999999999887755320 011124555554
Q ss_pred cCCCCeEEEEecCCCCeEEEEEccCCeE
Q psy11539 311 EDCDHVFAYVNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 311 ~~c~~~~AYItDsg~~gLIVyDl~~g~s 338 (530)
.++.+ ++=...+.|.+||+.+++.
T Consensus 216 ---~~~~~-~~~~~~g~i~~~d~~~~~~ 239 (425)
T 1r5m_A 216 ---DDDKF-VIPGPKGAIFVYQITEKTP 239 (425)
T ss_dssp ---ETTEE-EEECGGGCEEEEETTCSSC
T ss_pred ---CCCEE-EEEcCCCeEEEEEcCCCce
Confidence 22333 3333456899999998743
No 138
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.91 E-value=1.4 Score=42.80 Aligned_cols=58 Identities=10% Similarity=0.100 Sum_probs=37.1
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEE
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv 341 (530)
-+|.+||+.+++.+.++... ......+++. .++.++.... ....|.+||+++++.-+.
T Consensus 144 g~v~i~~~~~~~~~~~~~~~------~~~v~~~~~s----pdg~~lasg~-~dg~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 144 GKVNIFGVESGKKEYSLDTR------GKFILSIAYS----PDGKYLASGA-IDGIINIFDIATGKLLHT 201 (321)
T ss_dssp SEEEEEETTTCSEEEEEECS------SSCEEEEEEC----TTSSEEEEEE-TTSCEEEEETTTTEEEEE
T ss_pred CcEEEEEcCCCceeEEecCC------CceEEEEEEC----CCCCEEEEEc-CCCeEEEEECCCCcEEEE
Confidence 45899999999887766542 2334555554 2344444433 346799999999866543
No 139
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.91 E-value=1.1 Score=41.72 Aligned_cols=81 Identities=14% Similarity=0.080 Sum_probs=46.8
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
..+..+...+++++.+.=.. .-+|.+||+.+++......+... ...+..+.+. .++.+++
T Consensus 98 ~~v~~~~~~~~~~~l~~~~~------------d~~i~~~d~~~~~~~~~~~~~~~----~~~i~~~~~~----~~~~~l~ 157 (337)
T 1gxr_A 98 NYIRSCKLLPDGCTLIVGGE------------ASTLSIWDLAAPTPRIKAELTSS----APACYALAIS----PDSKVCF 157 (337)
T ss_dssp SBEEEEEECTTSSEEEEEES------------SSEEEEEECCCC--EEEEEEECS----SSCEEEEEEC----TTSSEEE
T ss_pred CcEEEEEEcCCCCEEEEEcC------------CCcEEEEECCCCCcceeeecccC----CCceEEEEEC----CCCCEEE
Confidence 34667788877765443111 13599999999874333333221 2334555654 2345555
Q ss_pred EecCCCCeEEEEEccCCeEEEE
Q psy11539 320 VNDVFRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~swRv 341 (530)
.... .+.|.+||+++++.-+.
T Consensus 158 ~~~~-dg~v~~~d~~~~~~~~~ 178 (337)
T 1gxr_A 158 SCCS-DGNIAVWDLHNQTLVRQ 178 (337)
T ss_dssp EEET-TSCEEEEETTTTEEEEE
T ss_pred EEeC-CCcEEEEeCCCCceeee
Confidence 5543 45799999998865543
No 140
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=95.87 E-value=1.1 Score=46.94 Aligned_cols=58 Identities=7% Similarity=0.090 Sum_probs=38.1
Q ss_pred CceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccC
Q psy11539 410 QRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVT 476 (530)
Q Consensus 410 ~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~ 476 (530)
...|||..+....+++.++.- ..+. ...++.+-......-++++.+|.+|.||+..-.
T Consensus 286 ~G~ly~~~~~~~aI~~w~~~~---~~~~------~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 286 TKVIFFAEANTKQVSCWNTQK---MPLR------MKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp TCEEEEEESSSSEEEEEETTS---CSBC------GGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred CCeEEEEeccCCeEEEEeCCC---Cccc------cCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 368999999999999998741 0110 012223322112235899999999999998744
No 141
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=95.76 E-value=1.6 Score=42.37 Aligned_cols=56 Identities=9% Similarity=0.051 Sum_probs=36.1
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEE
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSY 339 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~sw 339 (530)
-.|.+||+.+++.++.+..... ....+++. .++.++ ++-.....|.+||+++++.-
T Consensus 102 ~~i~lWd~~~~~~~~~~~~~~~------~~~~~~~s----pdg~~l-~~g~~dg~v~i~~~~~~~~~ 157 (321)
T 3ow8_A 102 AHIRLWDLENGKQIKSIDAGPV------DAWTLAFS----PDSQYL-ATGTHVGKVNIFGVESGKKE 157 (321)
T ss_dssp SEEEEEETTTTEEEEEEECCTT------CCCCEEEC----TTSSEE-EEECTTSEEEEEETTTCSEE
T ss_pred CcEEEEECCCCCEEEEEeCCCc------cEEEEEEC----CCCCEE-EEEcCCCcEEEEEcCCCcee
Confidence 4599999999999988776332 12344554 123333 33345568999999887543
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.63 E-value=1 Score=40.72 Aligned_cols=81 Identities=6% Similarity=-0.082 Sum_probs=48.0
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCC-CcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKT-NTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~T-d~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
.|..+...++|++.+... ..+|.+||+.+ ++..+..... ....+..+++.. .+...+|
T Consensus 43 ~v~~~~~spdg~~l~~~~-------------~~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~sp---dg~~l~~ 101 (297)
T 2ojh_A 43 LFEAPNWSPDGKYLLLNS-------------EGLLYRLSLAGDPSPEKVDTGF-----ATICNNDHGISP---DGALYAI 101 (297)
T ss_dssp CCEEEEECTTSSEEEEEE-------------TTEEEEEESSSCCSCEECCCTT-----CCCBCSCCEECT---TSSEEEE
T ss_pred ceEeeEECCCCCEEEEEc-------------CCeEEEEeCCCCCCceEecccc-----ccccccceEECC---CCCEEEE
Confidence 355677888888666632 13699999999 8776433221 123456667651 1234455
Q ss_pred EecC--CCCeEEEEEccCCeEEEEc
Q psy11539 320 VNDV--FRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 320 ItDs--g~~gLIVyDl~~g~swRv~ 342 (530)
.... +...|.++|..+++..++.
T Consensus 102 ~~~~~~~~~~l~~~~~~~~~~~~~~ 126 (297)
T 2ojh_A 102 SDKVEFGKSAIYLLPSTGGTPRLMT 126 (297)
T ss_dssp EECTTTSSCEEEEEETTCCCCEECC
T ss_pred EEeCCCCcceEEEEECCCCceEEee
Confidence 5522 3567888888877654433
No 143
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.63 E-value=0.68 Score=50.70 Aligned_cols=203 Identities=9% Similarity=0.044 Sum_probs=104.6
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCc--EEEEEECCCcc-cccCccccceEEEeecCCCCeE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNT--LIRKYILPTAQ-VFEGSLFSNIVTEVVEDCDHVF 317 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~--li~~y~~P~~v-~~~~S~lndIvVDv~~~c~~~~ 317 (530)
.|..+..|..|+|||--.+ + |+.||..+++ .++.|.....- ......+..|..| .++.
T Consensus 325 ~v~~i~~D~~g~lWiGt~~--G------------l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d-----~~g~ 385 (758)
T 3ott_A 325 QFYSLFRDSKGFYWFGGAN--G------------LIRFTDPAGERHDAIWYRMGDKTYPLSHNRIRHIYED-----KEQQ 385 (758)
T ss_dssp BEEEEEECTTCCEEEEETT--E------------EEEESCTTSSCCCCEEECTTCSSSCCSCSCEEEEEEC-----TTSC
T ss_pred eEEEEEEcCCCCEEEeeCC--c------------ceeecccccccceeEEeccCCcCCCCCCCceEEEEEC-----CCCC
Confidence 4788899999999997421 1 7888887653 23334331110 0011223445555 5678
Q ss_pred EEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCccccccccccc
Q psy11539 318 AYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHY 397 (530)
Q Consensus 318 AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~ 397 (530)
++|.-. .||.+||.++++..++.+. +.. ..+ . ..-+..|.-+
T Consensus 386 lWigt~--~GL~~~~~~~~~~~~~~~~----~~~-~~~--~------~~~v~~i~~d----------------------- 427 (758)
T 3ott_A 386 LWIATD--GSINRYDYATRQFIHYNIV----DNT-GTY--N------TNWTYYIFED----------------------- 427 (758)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEEEE----CCC---C--B------SSSEEEEEEC-----------------------
T ss_pred EEEEeC--CcHhhcCcCCCcEEEeecC----CCc-CCC--C------CceEEEEEEc-----------------------
Confidence 999752 4999999999876654321 100 000 0 0012223222
Q ss_pred CCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCccccccceEEec-cccC-CCCCcceEEcCCCcEEEEcc
Q psy11539 398 NGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLG-SRFK-NTQASASAINSNGVMFYNLV 475 (530)
Q Consensus 398 ~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~~~~v~~lG-~rG~-~sqs~G~aiD~~G~LYft~~ 475 (530)
....|+.....+ -|++++..-+..... .... ..+.+. ..|. ......+..|++|+|+++..
T Consensus 428 -----------~~g~lWigT~~~-Gl~~~~~~~~~~~~~----~~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~ 490 (758)
T 3ott_A 428 -----------TAGQLWISTCLG-GIFVVDKHKLMQSTS----GQYI-AEQNYSVHNGLSGMFINQIIPDNEGNVWVLLY 490 (758)
T ss_dssp -----------TTSEEEEEESSS-CEEEEEHHHHHHCCS----SEEE-CSEEECGGGTCSCSCEEEEEECTTSCEEEEET
T ss_pred -----------CCCCEEEEECCC-ceEEEccccccccCC----ccee-cccccccccccccceeeeEEEcCCCCEEEEcc
Confidence 224577766543 377776442211000 0000 001111 1111 11244578899999999333
Q ss_pred CCCeEEEEeCCCCccccCceeEEeecC-CceeecceeEEecCCcEEEE
Q psy11539 476 TKHSVGCWNTKTKVYLPQTQDIVQTSR-DILNFREEGEEEEEKENTCT 522 (530)
Q Consensus 476 ~~~aI~cWnt~~~~~~~~n~~lV~~d~-~~L~~Pd~l~Id~dG~lYv~ 522 (530)
..++|.|+|+.++.+. .+..+. ..-..+..+..|.+|.||+.
T Consensus 491 t~~Gl~~~d~~~~~~~-----~~~~~~~~~~~~~~~i~~d~~g~lWig 533 (758)
T 3ott_A 491 NNKGIDKINPRTREVT-----KLFADELTGEKSPNYLLCDEDGLLWVG 533 (758)
T ss_dssp TCSSEEEEETTTTEEE-----EECTTTSCGGGCEEEEEECTTSCEEEE
T ss_pred CCCCcEEEeCCCCceE-----EecCCCcCCCcccceEEECCCCCEEEE
Confidence 3478999999844332 221110 00124557788889988874
No 144
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.45 E-value=0.26 Score=53.99 Aligned_cols=82 Identities=17% Similarity=0.218 Sum_probs=50.8
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCC------CcEE--EEEECCCcccccCccccceEEEeec
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKT------NTLI--RKYILPTAQVFEGSLFSNIVTEVVE 311 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~T------d~li--~~y~~P~~v~~~~S~lndIvVDv~~ 311 (530)
..|+.+..|..|+|||-=.|. . |..||.++ .... +.|.....+ ....+..|..|
T Consensus 419 ~~v~~i~~d~~g~lWigT~~~-G------------l~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~i~~i~~d--- 480 (758)
T 3ott_A 419 NWTYYIFEDTAGQLWISTCLG-G------------IFVVDKHKLMQSTSGQYIAEQNYSVHNGL--SGMFINQIIPD--- 480 (758)
T ss_dssp SSEEEEEECTTSEEEEEESSS-C------------EEEEEHHHHHHCCSSEEECSEEECGGGTC--SCSCEEEEEEC---
T ss_pred ceEEEEEEcCCCCEEEEECCC-c------------eEEEccccccccCCcceeccccccccccc--ccceeeeEEEc---
Confidence 347888999999999964321 1 78888653 1222 233321111 12234556666
Q ss_pred CCCCeEEEEecCCCCeEEEEEccCCeEEEE
Q psy11539 312 DCDHVFAYVNDVFRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 312 ~c~~~~AYItDsg~~gLIVyDl~~g~swRv 341 (530)
.++.++|.-....||.+||.++++..++
T Consensus 481 --~~g~lWi~~~t~~Gl~~~d~~~~~~~~~ 508 (758)
T 3ott_A 481 --NEGNVWVLLYNNKGIDKINPRTREVTKL 508 (758)
T ss_dssp --TTSCEEEEETTCSSEEEEETTTTEEEEE
T ss_pred --CCCCEEEEccCCCCcEEEeCCCCceEEe
Confidence 5788999433347999999998866554
No 145
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.45 E-value=3.1 Score=44.81 Aligned_cols=131 Identities=14% Similarity=0.069 Sum_probs=75.5
Q ss_pred eeeEEeCCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCC--CCceEEEEEEEeCCCcEEEEeCCCC
Q psy11539 184 LGIGIWRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNC--NSLISVFRMSVDKCDRLWIMDTGVT 261 (530)
Q Consensus 184 ~GV~v~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc--~~LvSV~rv~ID~cgRLWVLDtG~~ 261 (530)
.++.+++++||+... + ..|.-++..++. .+ |+....... ..+.+ ...++ .|+|+|...|.
T Consensus 109 ~~~~~~~~~v~v~~~---d---g~l~alD~~tG~---~~-----W~~~~~~~~~~~~~~~--~P~v~-~g~v~vg~~~~- 170 (571)
T 2ad6_A 109 RGLAYGAGQIVKKQA---N---GHLLALDAKTGK---IN-----WEVEVCDPKVGSTLTQ--APFVA-KDTVLMGCSGA- 170 (571)
T ss_dssp CCCEEETTEEEEECT---T---SEEEEEETTTCC---EE-----EEEECCCGGGTCBCCS--CCEEE-TTEEEEECBCG-
T ss_pred cccEEECCEEEEEeC---C---CEEEEEECCCCC---EE-----EEecCCCCCccceecc--CCEEE-CCEEEEEecCC-
Confidence 467788999999852 2 378888875432 11 322211000 01111 11222 47787765542
Q ss_pred CcccCccccCCCEEEEEECCCCcEEEEEECCCcccc--------------------------------cCccccceEEEe
Q psy11539 262 NILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVF--------------------------------EGSLFSNIVTEV 309 (530)
Q Consensus 262 ~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~--------------------------------~~S~lndIvVDv 309 (530)
+ ....-.|++||++||+++-++........ ..+....+++|.
T Consensus 171 ~------~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~ 244 (571)
T 2ad6_A 171 E------LGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDP 244 (571)
T ss_dssp G------GTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEET
T ss_pred c------cCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcC
Confidence 0 01235799999999999999987432200 001112467773
Q ss_pred ecCCCCeEEEEecCC---------------CCeEEEEEccCCeE-EEEc
Q psy11539 310 VEDCDHVFAYVNDVF---------------RYGLIVYDFFKNTS-YRLT 342 (530)
Q Consensus 310 ~~~c~~~~AYItDsg---------------~~gLIVyDl~~g~s-wRv~ 342 (530)
..+.+|+.... ...|+.+|.++|+. |+..
T Consensus 245 ----~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~ 289 (571)
T 2ad6_A 245 ----KLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQ 289 (571)
T ss_dssp ----TTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEE
T ss_pred ----CCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEec
Confidence 45789987532 13699999999875 7765
No 146
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.39 E-value=2.1 Score=41.40 Aligned_cols=57 Identities=9% Similarity=0.108 Sum_probs=37.2
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEE
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swR 340 (530)
-.|.+||+.+++.+.++.-.. .....+.+. .++...++=+.+..|.+||+++++.-+
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~------~~v~~~~~~-----~~~~~l~sg~~d~~v~~wd~~~~~~~~ 220 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHT------GDVMSLSLA-----PDTRLFVSGACDASAKLWDVREGMCRQ 220 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCS------SCEEEEEEC-----TTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred CcEEEEECCCCcEEEEEcCCC------CceEEEEEC-----CCCCEEEEEeCCCcEEEEECCCCeeEE
Confidence 348999999999887664321 224455554 233445555556789999999886544
No 147
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.32 E-value=2.5 Score=41.87 Aligned_cols=78 Identities=8% Similarity=0.072 Sum_probs=48.3
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+....++++.+. |.. .-.|.+||+++++.+.++..... ...+++. ..++...+
T Consensus 167 ~v~~~~~~p~~~~l~s--~s~----------d~~v~iwd~~~~~~~~~~~~~~~-------v~~~~~~----~~~~~~l~ 223 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVS--GSG----------DRTVRIWDLRTGQCSLTLSIEDG-------VTTVAVS----PGDGKYIA 223 (393)
T ss_dssp CEEEEEECTTSSEEEE--EET----------TSEEEEEETTTTEEEEEEECSSC-------EEEEEEC----STTCCEEE
T ss_pred CEEEEEEcCCCCEEEE--ecC----------CCcEEEEECCCCeeEEEEEcCCC-------cEEEEEE----CCCCCEEE
Confidence 4666777777665443 211 14599999999998887765332 3344443 12343444
Q ss_pred ecCCCCeEEEEEccCCeEEEE
Q psy11539 321 NDVFRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swRv 341 (530)
+=+....|.+||.++++.-+.
T Consensus 224 ~~s~d~~v~iwd~~~~~~~~~ 244 (393)
T 1erj_A 224 AGSLDRAVRVWDSETGFLVER 244 (393)
T ss_dssp EEETTSCEEEEETTTCCEEEE
T ss_pred EEcCCCcEEEEECCCCcEEEe
Confidence 444567899999999875543
No 148
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.32 E-value=1.9 Score=42.65 Aligned_cols=79 Identities=13% Similarity=0.103 Sum_probs=50.7
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+.+..+|++-+. |..+ -.|.+||+.++++++++.-.. .....+.+. .++..+++
T Consensus 129 ~V~~v~~spdg~~l~s--gs~d----------~~i~iwd~~~~~~~~~~~~h~------~~V~~~~~~----~~~~~~l~ 186 (344)
T 4gqb_B 129 IVSTVSVLSSGTQAVS--GSKD----------ICIKVWDLAQQVVLSSYRAHA------AQVTCVAAS----PHKDSVFL 186 (344)
T ss_dssp CEEEEEECTTSSEEEE--EETT----------SCEEEEETTTTEEEEEECCCS------SCEEEEEEC----SSCTTEEE
T ss_pred CEEEEEECCCCCEEEE--EeCC----------CeEEEEECCCCcEEEEEcCcC------CceEEEEec----CCCCCcee
Confidence 4667778777776553 2211 238999999999988664322 233445553 23444566
Q ss_pred ecCCCCeEEEEEccCCeEEEE
Q psy11539 321 NDVFRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swRv 341 (530)
+=+.+..|.+||+++++.-+.
T Consensus 187 s~s~D~~v~iwd~~~~~~~~~ 207 (344)
T 4gqb_B 187 SCSEDNRILLWDTRCPKPASQ 207 (344)
T ss_dssp EEETTSCEEEEETTSSSCEEE
T ss_pred eeccccccccccccccceeee
Confidence 666677899999998865543
No 149
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=95.28 E-value=2.4 Score=41.35 Aligned_cols=80 Identities=8% Similarity=0.031 Sum_probs=51.5
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
-.|..+....++++.+. |..+ -.|.+||+.+++.++++.-. ...+..+++. .++.+++
T Consensus 140 ~~v~~~~~~~~~~~l~s--~s~d----------~~i~iwd~~~~~~~~~~~~h------~~~v~~~~~~----~~~~~l~ 197 (420)
T 3vl1_A 140 SEITKLKFFPSGEALIS--SSQD----------MQLKIWSVKDGSNPRTLIGH------RATVTDIAII----DRGRNVL 197 (420)
T ss_dssp SCEEEEEECTTSSEEEE--EETT----------SEEEEEETTTCCCCEEEECC------SSCEEEEEEE----TTTTEEE
T ss_pred CccEEEEECCCCCEEEE--EeCC----------CeEEEEeCCCCcCceEEcCC------CCcEEEEEEc----CCCCEEE
Confidence 35677788877775442 2211 35999999999888776532 2345666665 2344444
Q ss_pred EecCCCCeEEEEEccCCeEEEEc
Q psy11539 320 VNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.+ +....|.+||+++++..+..
T Consensus 198 s~-~~d~~v~iwd~~~~~~~~~~ 219 (420)
T 3vl1_A 198 SA-SLDGTIRLWECGTGTTIHTF 219 (420)
T ss_dssp EE-ETTSCEEEEETTTTEEEEEE
T ss_pred EE-cCCCcEEEeECCCCceeEEe
Confidence 33 34567999999999876654
No 150
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.28 E-value=1 Score=44.45 Aligned_cols=76 Identities=14% Similarity=0.110 Sum_probs=47.8
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+.+.++|++.+. |..+ -.|.+||+.+++++..+.-.. .....+++. .++...++
T Consensus 141 ~V~~v~~spdg~~l~s--gs~d----------g~v~iwd~~~~~~~~~~~~h~------~~v~~v~~s----~~~~~~~~ 198 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVS--GGKD----------FSVKVWDLSQKAVLKSYNAHS------SEVNCVAAC----PGKDTIFL 198 (357)
T ss_dssp CEEEEEECSSSSEEEE--EETT----------SCEEEEETTTTEEEEEECCCS------SCEEEEEEC----TTCSSCEE
T ss_pred CEEEEEECCCCCEEEE--EeCC----------CeEEEEECCCCcEEEEEcCCC------CCEEEEEEc----cCCCceee
Confidence 4667778777776543 2111 238999999999988775422 234455553 12334455
Q ss_pred ecCCCCeEEEEEccCCeE
Q psy11539 321 NDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~s 338 (530)
+-.....|.+||+++++.
T Consensus 199 s~~~dg~v~~wd~~~~~~ 216 (357)
T 4g56_B 199 SCGEDGRILLWDTRKPKP 216 (357)
T ss_dssp EEETTSCEEECCTTSSSC
T ss_pred eeccCCceEEEECCCCce
Confidence 555567899999988743
No 151
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=95.24 E-value=2.4 Score=41.10 Aligned_cols=81 Identities=10% Similarity=0.034 Sum_probs=47.8
Q ss_pred EEEEEEEeCCC-cEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCC-eEE
Q psy11539 241 SVFRMSVDKCD-RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDH-VFA 318 (530)
Q Consensus 241 SV~rv~ID~cg-RLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~-~~A 318 (530)
.|..+....++ ++.+.=.. .-.|.+||+.+++....+.+.. ....+..+.+. ..+ .++
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~~----h~~~v~~~~~~----~~~~~~l 134 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSK------------GGDIILWDYDVQNKTSFIQGMG----PGDAITGMKFN----QFNTNQL 134 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEB------------TSCEEEEETTSTTCEEEECCCS----TTCBEEEEEEE----TTEEEEE
T ss_pred CEEEEEECCCCCCEEEEEcC------------CCeEEEEeCCCcccceeeecCC----cCCceeEEEeC----CCCCCEE
Confidence 45666777766 44433111 1239999999998887766522 12345666664 113 344
Q ss_pred EEecCCCCeEEEEEccCCeEEEEc
Q psy11539 319 YVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 319 YItDsg~~gLIVyDl~~g~swRv~ 342 (530)
+.+ +....|.+||+.++....+.
T Consensus 135 ~s~-~~d~~i~iwd~~~~~~~~~~ 157 (383)
T 3ei3_B 135 FVS-SIRGATTLRDFSGSVIQVFA 157 (383)
T ss_dssp EEE-ETTTEEEEEETTSCEEEEEE
T ss_pred EEE-eCCCEEEEEECCCCceEEEe
Confidence 444 44568999999975544443
No 152
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.11 E-value=2.3 Score=40.29 Aligned_cols=75 Identities=7% Similarity=-0.033 Sum_probs=46.9
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCc--EEEEEECCCcccccCccccceEEEeecCCCCeEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNT--LIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 318 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~--li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~A 318 (530)
.|..+...+++++-+.=.. .-+|.+||+.+++ .++++.-. ...+..+.+. .++.++
T Consensus 10 ~i~~~~~s~~~~~l~~~~~------------d~~v~i~~~~~~~~~~~~~~~~h------~~~v~~~~~~----~~~~~l 67 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPN------------NHEVHIYEKSGNKWVQVHELKEH------NGQVTGVDWA----PDSNRI 67 (372)
T ss_dssp CCCEEEECTTSSEEEEECS------------SSEEEEEEEETTEEEEEEEEECC------SSCEEEEEEE----TTTTEE
T ss_pred CeEEEEECCCCCEEEEEeC------------CCEEEEEeCCCCcEEeeeeecCC------CCcccEEEEe----CCCCEE
Confidence 3556677777765554211 1359999999987 66655432 2345667776 234455
Q ss_pred EEecCCCCeEEEEEccCCeE
Q psy11539 319 YVNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 319 YItDsg~~gLIVyDl~~g~s 338 (530)
+.+. ..+.|.+||+.+++.
T Consensus 68 ~~~~-~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 68 VTCG-TDRNAYVWTLKGRTW 86 (372)
T ss_dssp EEEE-TTSCEEEEEEETTEE
T ss_pred EEEc-CCCeEEEEECCCCee
Confidence 5544 456799999998863
No 153
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.10 E-value=2.3 Score=46.63 Aligned_cols=93 Identities=14% Similarity=0.063 Sum_probs=50.8
Q ss_pred EEEeCCCcEEEEeCCCCCccc----C---ccccCCCEEEEEECCCCcEEEEEECCCcccc-----cCccccceEEEeecC
Q psy11539 245 MSVDKCDRLWIMDTGVTNILS----S---IQQLCPPKIMVFDLKTNTLIRKYILPTAQVF-----EGSLFSNIVTEVVED 312 (530)
Q Consensus 245 v~ID~cgRLWVLDtG~~~~~~----~---~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~-----~~S~lndIvVDv~~~ 312 (530)
+.+|..+.+-.+-+|...... . ....-...|+++|++||+++-+|........ ....+.++.+| +
T Consensus 235 ~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~---G 311 (668)
T 1kv9_A 235 MAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNID---G 311 (668)
T ss_dssp EEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEET---T
T ss_pred eEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccC---C
Confidence 578876555555555421000 0 0011123699999999999999987432211 11233444443 0
Q ss_pred CCCeEEEEecCCCCeEEEEEccCCeE-EEE
Q psy11539 313 CDHVFAYVNDVFRYGLIVYDFFKNTS-YRL 341 (530)
Q Consensus 313 c~~~~AYItDsg~~gLIVyDl~~g~s-wRv 341 (530)
-....+|+.+. .+-|+++|.++|+. |++
T Consensus 312 ~~~~~v~~~~~-~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 312 KPRKVLMQAPK-NGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp EEEEEEEECCT-TSEEEEEETTTCCEEEEE
T ss_pred cEEEEEEEECC-CCEEEEEECCCCCEeccc
Confidence 00124666653 45788888888874 443
No 154
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=95.07 E-value=1.7 Score=49.54 Aligned_cols=81 Identities=11% Similarity=0.094 Sum_probs=51.2
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+.+..+|++-+. |.. .-.|.+||+.+++.++++.-.. .....+.+. + ..+..+.+
T Consensus 659 ~v~~~~~s~~~~~l~s--~~~----------d~~v~vwd~~~~~~~~~~~~~~------~~v~~~~~~--~-~~~~~~l~ 717 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIAT--CSA----------DKKVKIWDSATGKLVHTYDEHS------EQVNCCHFT--N-KSNHLLLA 717 (1249)
T ss_dssp CEEEEEECTTSSEEEE--EET----------TSEEEEEETTTCCEEEEEECCS------SCEEEEEEC--S-SSSCCEEE
T ss_pred CEEEEEEecCCCEEEE--EeC----------CCeEEEEECCCCceEEEEcCCC------CcEEEEEEe--c-CCCceEEE
Confidence 4667788777765543 111 1359999999999998876532 223444443 1 12344555
Q ss_pred ecCCCCeEEEEEccCCeEEEEc
Q psy11539 321 NDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swRv~ 342 (530)
+-+..+.|.+||+.+++.-+..
T Consensus 718 sg~~d~~v~vwd~~~~~~~~~~ 739 (1249)
T 3sfz_A 718 TGSNDFFLKLWDLNQKECRNTM 739 (1249)
T ss_dssp EEETTSCEEEEETTSSSEEEEE
T ss_pred EEeCCCeEEEEECCCcchhhee
Confidence 5556678999999988765543
No 155
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.07 E-value=0.13 Score=49.83 Aligned_cols=29 Identities=14% Similarity=-0.015 Sum_probs=23.1
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
.-..++++.+|.++++-...+.|..||..
T Consensus 207 ~v~~~~~sp~~~~l~~~~~d~~i~iwd~~ 235 (377)
T 3dwl_C 207 WVHAVGFSPSGNALAYAGHDSSVTIAYPS 235 (377)
T ss_dssp SEEEEEECTTSSCEEEEETTTEEC-CEEC
T ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 45677888888877777788899999988
No 156
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.95 E-value=2.3 Score=42.02 Aligned_cols=138 Identities=7% Similarity=0.048 Sum_probs=79.6
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecC--CCCeEEEEEccCCeEEEEcCCCCCcCC
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV--FRYGLIVYDFFKNTSYRLTHPYMYPEP 350 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs--g~~gLIVyDl~~g~swRv~h~sf~pdP 350 (530)
-.|.+||+.+++.+.++.-. ...+..+++. .++..++++-. ....|.+||+.+++..+....
T Consensus 239 ~~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~----p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~------ 302 (401)
T 4aez_A 239 NVVQIWDARSSIPKFTKTNH------NAAVKAVAWC----PWQSNLLATGGGTMDKQIHFWNAATGARVNTVDA------ 302 (401)
T ss_dssp SCEEEEETTCSSEEEEECCC------SSCCCEEEEC----TTSTTEEEEECCTTTCEEEEEETTTCCEEEEEEC------
T ss_pred CeEEEccCCCCCccEEecCC------cceEEEEEEC----CCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeC------
Confidence 45889999988887655421 2335566665 23445555543 567899999998865543311
Q ss_pred CcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeC---CCCeeEEEe
Q psy11539 351 TQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSM---SSNRHYYVS 427 (530)
Q Consensus 351 ~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pl---sS~~lY~V~ 427 (530)
...+..++++|++ +.|+...- ...++|.+.
T Consensus 303 --------------~~~v~~~~~s~~~---------------------------------~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 303 --------------GSQVTSLIWSPHS---------------------------------KEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp --------------SSCEEEEEECSSS---------------------------------SEEEEEECTTTCEEEEEEEE
T ss_pred --------------CCcEEEEEECCCC---------------------------------CeEEEEeecCCCcEEEEecC
Confidence 1134567777765 33333221 112233333
Q ss_pred cchhcCccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCC
Q psy11539 428 TTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTK 488 (530)
Q Consensus 428 T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~ 488 (530)
+..+ ....+.-|.. +....++++.+|.+.++....+.|..|+..++
T Consensus 336 ~~~~------------~~~~~~~~h~---~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 336 SSGL------------TKQVDIPAHD---TRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp TTEE------------EEEEEEECCS---SCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred Cccc------------eeEEEecCCC---CCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 2111 1111222332 24667788889988888888899999999733
No 157
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.85 E-value=1.8 Score=39.00 Aligned_cols=57 Identities=16% Similarity=0.207 Sum_probs=37.3
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccC-CeEEEEc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFK-NTSYRLT 342 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~-g~swRv~ 342 (530)
.+|.+||+.++++......+ ..+..+++. .++.+++.+. ...|.+||+.+ ++..++.
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~-------~~v~~~~~s----pdg~~l~~~~--~~~i~~~d~~~~~~~~~~~ 79 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTP-------ELFEAPNWS----PDGKYLLLNS--EGLLYRLSLAGDPSPEKVD 79 (297)
T ss_dssp EEEEEEETTTTEEEEEEEES-------SCCEEEEEC----TTSSEEEEEE--TTEEEEEESSSCCSCEECC
T ss_pred eeEEEEeCCCCceeeeccCC-------cceEeeEEC----CCCCEEEEEc--CCeEEEEeCCCCCCceEec
Confidence 67999999998877554432 234556665 2344444443 45899999998 7665544
No 158
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.79 E-value=3.8 Score=45.12 Aligned_cols=95 Identities=11% Similarity=0.074 Sum_probs=51.5
Q ss_pred EEEEeCCCcEEEEeCCCCCccc----C---ccccCCCEEEEEECCCCcEEEEEECCCccccc-----CccccceEEEeec
Q psy11539 244 RMSVDKCDRLWIMDTGVTNILS----S---IQQLCPPKIMVFDLKTNTLIRKYILPTAQVFE-----GSLFSNIVTEVVE 311 (530)
Q Consensus 244 rv~ID~cgRLWVLDtG~~~~~~----~---~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~-----~S~lndIvVDv~~ 311 (530)
.+.+|..+.+-.+.+|...... . ....-.-.|+++|++||+++-++......... ...+.++.+|
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~--- 315 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPID--- 315 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEET---
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccC---
Confidence 4677876666666666421000 0 00011136999999999999998874321111 1122344332
Q ss_pred CCCCeEEEEecCCCCeEEEEEccCCeE-EEEc
Q psy11539 312 DCDHVFAYVNDVFRYGLIVYDFFKNTS-YRLT 342 (530)
Q Consensus 312 ~c~~~~AYItDsg~~gLIVyDl~~g~s-wRv~ 342 (530)
+-....+|+.+. .+-|.++|.++|+. |++.
T Consensus 316 G~~~~~v~~~~~-~G~l~~lD~~tG~~l~~~~ 346 (689)
T 1yiq_A 316 GKPRKVLMQAPK-NGFFYVIDRATGELLSAKG 346 (689)
T ss_dssp TEEEEEEEECCT-TSEEEEEETTTCCEEEEEE
T ss_pred CcEEEEEEEECC-CCeEEEEECCCCCEecccc
Confidence 000125555553 45788899988875 4443
No 159
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=94.67 E-value=2.9 Score=39.24 Aligned_cols=78 Identities=12% Similarity=0.060 Sum_probs=49.3
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCC-CcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKT-NTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~T-d~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
.+..+....++++.++ |.. .-.|.+||+.+ .+.++.+.... ..+..+.+. .++.+++
T Consensus 177 ~~~~~~~~~~~~~l~~--~~~----------dg~i~i~d~~~~~~~~~~~~~~~------~~v~~~~~~----~~~~~l~ 234 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIA--GHK----------DGKISKYDVSNNYEYVDSIDLHE------KSISDMQFS----PDLTYFI 234 (369)
T ss_dssp CEEEEEECGGGCEEEE--EET----------TSEEEEEETTTTTEEEEEEECCS------SCEEEEEEC----TTSSEEE
T ss_pred ceeEEEEcCCCCEEEE--EcC----------CCEEEEEECCCCcEeEEEEecCC------CceeEEEEC----CCCCEEE
Confidence 6677777777765554 111 13599999999 67777776532 334556664 2344554
Q ss_pred EecCCCCeEEEEEccCCeEEEE
Q psy11539 320 VNDVFRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~swRv 341 (530)
.+. ....|.+||+.+++..+.
T Consensus 235 ~~~-~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 235 TSS-RDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp EEE-TTSEEEEEETTTCCEEEE
T ss_pred Eec-CCceEEEEECCCCceeee
Confidence 443 456899999998865543
No 160
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=94.62 E-value=3.3 Score=39.62 Aligned_cols=56 Identities=13% Similarity=0.103 Sum_probs=34.8
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeE
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~s 338 (530)
.|.+||+.+++.+..+.++.. ...+.+... ..++.+++... ..+.|.+||+.+++.
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~-~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNFEET-------VYSHHMSPV-STKHCLVAVGT-RGPKVQLCDLKSGSC 178 (408)
T ss_dssp EEEEEETTTTEEEEEEECSSC-------EEEEEECSS-CSSCCEEEEEE-SSSSEEEEESSSSCC
T ss_pred eEEEeeCCCCccceeccCCCc-------eeeeEeecC-CCCCcEEEEEc-CCCeEEEEeCCCcce
Confidence 499999999999998887443 223333211 11223444443 446799999988743
No 161
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.58 E-value=3.8 Score=40.14 Aligned_cols=62 Identities=10% Similarity=0.095 Sum_probs=36.9
Q ss_pred cceEEcCCCcEEEEccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeecee
Q psy11539 460 SASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKY 528 (530)
Q Consensus 460 ~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~ 528 (530)
..+++..+|.+.++-...+.|..||..++.. ...+.. .-.....+++..+|...+++..++.
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~----~~~l~~---h~~~v~~l~~spdg~~l~sgs~D~~ 349 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKGSR----VSILFG---HENRVSTLRVSPDGTAFCSGSWDHT 349 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCSE----EEEECC---CSSCEEEEEECTTSSCEEEEETTSE
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCCce----EEEEEC---CCCcEEEEEECCCCCEEEEEcCCCC
Confidence 4566778888888888889999999862321 222211 1123445666666655555544443
No 162
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.52 E-value=0.95 Score=45.55 Aligned_cols=59 Identities=12% Similarity=0.066 Sum_probs=34.5
Q ss_pred EEEEEECCCCcEE-EEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCC
Q psy11539 274 KIMVFDLKTNTLI-RKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKN 336 (530)
Q Consensus 274 KLvvfDL~Td~li-~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g 336 (530)
+|.+||+.++... ..+............+.++++. ..+..++++....+.|.+||++++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~----p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWH----LLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEEC----SSCTTEEEEEETTSEEEEEETTCS
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEe----CCCCCEEEEEeCCCeEEEEECCCC
Confidence 4899999874321 0011100000112345566665 235677788888889999999977
No 163
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.50 E-value=1.4 Score=42.46 Aligned_cols=29 Identities=14% Similarity=0.227 Sum_probs=24.0
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
....++++.+|.++++.-..+.|..||..
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 45567788888888888888999999997
No 164
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=94.41 E-value=3.9 Score=39.57 Aligned_cols=29 Identities=7% Similarity=0.202 Sum_probs=23.0
Q ss_pred CCcceEEcC-CCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINS-NGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~-~G~LYft~~~~~aI~cWnt~ 486 (530)
....++++. +|.++++....+.|..||..
T Consensus 252 ~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~ 281 (383)
T 3ei3_B 252 PVNAAYFNPTDSTKLLTTDQRNEIRVYSSY 281 (383)
T ss_dssp CEEEEEECTTTSCEEEEEESSSEEEEEETT
T ss_pred ceEEEEEcCCCCCEEEEEcCCCcEEEEECC
Confidence 456677777 88888887778889999887
No 165
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=94.23 E-value=2.5 Score=41.78 Aligned_cols=81 Identities=9% Similarity=0.031 Sum_probs=47.6
Q ss_pred EEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEe
Q psy11539 242 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 321 (530)
Q Consensus 242 V~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYIt 321 (530)
|..+....+++|.+ |..+ -.|.+||+.+++.+....+... .-...+..|++. .++.++...
T Consensus 85 v~~~~~s~d~~l~~---~s~d----------g~v~lWd~~~~~~~~~~~~~~~--~H~~~V~~v~~s----pdg~~l~sg 145 (344)
T 4gqb_B 85 VADLTWVGERGILV---ASDS----------GAVELWELDENETLIVSKFCKY--EHDDIVSTVSVL----SSGTQAVSG 145 (344)
T ss_dssp EEEEEEETTTEEEE---EETT----------SEEEEEEECTTSSCEEEEEEEE--CCSSCEEEEEEC----TTSSEEEEE
T ss_pred EEEEEEeCCCeEEE---EECC----------CEEEEEeccCCCceeEeecccc--CCCCCEEEEEEC----CCCCEEEEE
Confidence 66677777776543 2222 2489999999986655443110 012334556654 234444433
Q ss_pred cCCCCeEEEEEccCCeEEEEc
Q psy11539 322 DVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 322 Dsg~~gLIVyDl~~g~swRv~ 342 (530)
+....|.+||+.+++.-+..
T Consensus 146 -s~d~~i~iwd~~~~~~~~~~ 165 (344)
T 4gqb_B 146 -SKDICIKVWDLAQQVVLSSY 165 (344)
T ss_dssp -ETTSCEEEEETTTTEEEEEE
T ss_pred -eCCCeEEEEECCCCcEEEEE
Confidence 34567999999999766543
No 166
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=94.01 E-value=5.1 Score=39.44 Aligned_cols=28 Identities=14% Similarity=0.335 Sum_probs=24.1
Q ss_pred CcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 459 ASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 459 s~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
...+++..+|.+.++-...+.|.+||..
T Consensus 301 v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 301 VTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp CSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred eEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 4567888889999998889999999986
No 167
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=93.80 E-value=1.2 Score=43.24 Aligned_cols=29 Identities=10% Similarity=0.123 Sum_probs=22.9
Q ss_pred CCcceEEcC-CCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINS-NGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~-~G~LYft~~~~~aI~cWnt~ 486 (530)
....+++.. +|.++++-...+.|..||..
T Consensus 264 ~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~ 293 (416)
T 2pm9_A 264 GILSLDWCHQDEHLLLSSGRDNTVLLWNPE 293 (416)
T ss_dssp CEEEEEECSSCSSCEEEEESSSEEEEECSS
T ss_pred ceeEEEeCCCCCCeEEEEeCCCCEEEeeCC
Confidence 345667775 78888888888999999987
No 168
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=93.79 E-value=3.7 Score=40.20 Aligned_cols=81 Identities=9% Similarity=0.090 Sum_probs=47.3
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECC-CCcEEEEEECCCcccc-cCccccceEEEeecCCCCeEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLK-TNTLIRKYILPTAQVF-EGSLFSNIVTEVVEDCDHVFA 318 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~-Td~li~~y~~P~~v~~-~~S~lndIvVDv~~~c~~~~A 318 (530)
.|..+....++++.+. | .+ -.|.+||+. +++.++.+.+...... -...+..+++. .++...
T Consensus 179 ~v~~~~~~~~~~~l~s--~-~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~----p~~~~~ 241 (447)
T 3dw8_B 179 HINSISINSDYETYLS--A-DD----------LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFH----PNSCNT 241 (447)
T ss_dssp CCCEEEECTTSSEEEE--E-CS----------SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEEC----SSCTTE
T ss_pred ceEEEEEcCCCCEEEE--e-CC----------CeEEEEECCCCCceeeeeecccccccccCcceEEEEEC----CCCCcE
Confidence 3555666667776654 3 12 459999998 4567776666432221 23445566665 122123
Q ss_pred EEecCCCCeEEEEEccCCeE
Q psy11539 319 YVNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 319 YItDsg~~gLIVyDl~~g~s 338 (530)
.++=+..+.|.+||+++++.
T Consensus 242 l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 242 FVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEEEETTSCEEEEETTTCSS
T ss_pred EEEEeCCCeEEEEECcCCcc
Confidence 33333456899999998864
No 169
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=93.68 E-value=3.4 Score=44.36 Aligned_cols=77 Identities=6% Similarity=0.093 Sum_probs=49.2
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+.+.++|++-++=.. ...|.+||+.+++.++++.... .....+++. .++.++.+
T Consensus 15 ~v~~i~~sp~~~~la~~~~------------~g~v~iwd~~~~~~~~~~~~~~------~~v~~~~~s----~~~~~l~~ 72 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLY------------SGRVEIWNYETQVEVRSIQVTE------TPVRAGKFI----ARKNWIIV 72 (814)
T ss_dssp CEEEEEECSSSSEEEEEET------------TSEEEEEETTTTEEEEEEECCS------SCEEEEEEE----GGGTEEEE
T ss_pred ceEEEEECCCCCEEEEEeC------------CCEEEEEECCCCceEEEEecCC------CcEEEEEEe----CCCCEEEE
Confidence 3566677776664443111 1359999999999998887533 234566665 23445555
Q ss_pred ecCCCCeEEEEEccCCeEEE
Q psy11539 321 NDVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swR 340 (530)
+.. .+.|.|||+.+++.-+
T Consensus 73 ~~~-dg~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 73 GSD-DFRIRVFNYNTGEKVV 91 (814)
T ss_dssp EET-TSEEEEEETTTCCEEE
T ss_pred EeC-CCeEEEEECCCCcEEE
Confidence 443 5689999999886544
No 170
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=93.64 E-value=9.8 Score=41.72 Aligned_cols=97 Identities=14% Similarity=0.048 Sum_probs=53.6
Q ss_pred EEEEeCCCcEEEEeCCCCCccc-C------ccccCCCEEEEEECCCCcEEEEEECCCccccc-CccccceEEEeecCCCC
Q psy11539 244 RMSVDKCDRLWIMDTGVTNILS-S------IQQLCPPKIMVFDLKTNTLIRKYILPTAQVFE-GSLFSNIVTEVVEDCDH 315 (530)
Q Consensus 244 rv~ID~cgRLWVLDtG~~~~~~-~------~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~-~S~lndIvVDv~~~c~~ 315 (530)
.+.+|..+.+-.+-+|...... . ....-.-.|+++|++||+++-+|.+.....-. ...-.-+.+|...+ .+
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~d-G~ 325 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIA-GK 325 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEET-TE
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccC-Cc
Confidence 5677876666666666421100 0 00011136999999999999999884431111 11112233332210 11
Q ss_pred --eEEEEecCCCCeEEEEEccCCeE-EEEc
Q psy11539 316 --VFAYVNDVFRYGLIVYDFFKNTS-YRLT 342 (530)
Q Consensus 316 --~~AYItDsg~~gLIVyDl~~g~s-wRv~ 342 (530)
..+|+.+. .+-|.++|.++|+. |++.
T Consensus 326 ~~~~l~~~~~-~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 326 PRKVILHAPK-NGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp EEEEEEECCT-TSEEEEEETTTCCEEEEEE
T ss_pred EeeEEEEECC-CCEEEEEECCCCCEecccc
Confidence 45666654 46799999999875 6654
No 171
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.51 E-value=5.7 Score=38.33 Aligned_cols=74 Identities=11% Similarity=0.148 Sum_probs=46.4
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
-.|..+....++++.+. |..+ -+|.+||+.+++.++.+..... ....+++. .++.++.
T Consensus 56 ~~v~~~~~s~d~~~l~s--~s~D----------g~v~iWd~~~~~~~~~~~~~~~------~v~~~~~s----~~~~~l~ 113 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLS--ASQD----------GKLIIWDSYTTNKVHAIPLRSS------WVMTCAYA----PSGNYVA 113 (340)
T ss_dssp SCEEEEEECTTSSEEEE--EETT----------TEEEEEETTTCCEEEEEECSSS------CEEEEEEC----TTSSEEE
T ss_pred CceEEEEECCCCCEEEE--EeCC----------CcEEEEECCCCCcceEeecCCc------cEEEEEEC----CCCCEEE
Confidence 45667777777776543 2211 3599999999999888776432 23444443 2344444
Q ss_pred EecCCCCeEEEEEccCC
Q psy11539 320 VNDVFRYGLIVYDFFKN 336 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g 336 (530)
.. .....|.+||+.++
T Consensus 114 s~-~~d~~v~iw~~~~~ 129 (340)
T 1got_B 114 CG-GLDNICSIYNLKTR 129 (340)
T ss_dssp EE-ETTCEEEEEETTTC
T ss_pred EE-eCCCeEEEEECccC
Confidence 33 34567889998875
No 172
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.34 E-value=2.3 Score=43.44 Aligned_cols=72 Identities=13% Similarity=0.077 Sum_probs=46.1
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCC----cEEEEEECCCcccccCcc-ccceEEEeecCC--
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN----TLIRKYILPTAQVFEGSL-FSNIVTEVVEDC-- 313 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td----~li~~y~~P~~v~~~~S~-lndIvVDv~~~c-- 313 (530)
.|..+.+.++|++.+.=.+ -.|.+||+.++ +.++++.-.. .. +..+++. .
T Consensus 20 ~v~~~~~spdg~~l~~~~~-------------~~v~v~~~~~~~~~~~~~~~~~~h~------~~~v~~~~~s----p~~ 76 (615)
T 1pgu_A 20 FTTHLSYDPTTNAIAYPCG-------------KSAFVRCLDDGDSKVPPVVQFTGHG------SSVVTTVKFS----PIK 76 (615)
T ss_dssp CCCCCEEETTTTEEEEEET-------------TEEEEEECCSSCCSSCSEEEECTTT------TSCEEEEEEC----SST
T ss_pred ceeEEEECCCCCEEEEecC-------------CeEEEEECCCCCCccccceEEecCC------CceEEEEEEC----cCC
Confidence 3556677788876555322 24999999998 7777664422 23 5566665 2
Q ss_pred CCeEEEEecCCCCeEEEEEccCC
Q psy11539 314 DHVFAYVNDVFRYGLIVYDFFKN 336 (530)
Q Consensus 314 ~~~~AYItDsg~~gLIVyDl~~g 336 (530)
++.++..+.. .+.|.|||+.++
T Consensus 77 ~~~~l~s~~~-dg~v~vw~~~~~ 98 (615)
T 1pgu_A 77 GSQYLCSGDE-SGKVIVWGWTFD 98 (615)
T ss_dssp TCCEEEEEET-TSEEEEEEEEEE
T ss_pred CCCEEEEecC-CCEEEEEeCCCC
Confidence 3456655554 568999999755
No 173
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=93.26 E-value=4.8 Score=42.79 Aligned_cols=76 Identities=14% Similarity=0.103 Sum_probs=47.7
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
..|..+.+.++++|-+. .+ ..|.+||+.++++.+....+ ....++++. + .++..||
T Consensus 82 ~~v~~~~~spd~~~~~~-~~-------------~~i~~~d~~~~~~~~l~~~~-------~~~~~~~~S--p-dG~~la~ 137 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQ-------------GGLVGFDMLARKVTYLFDTN-------EETASLDFS--P-VGDRVAY 137 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ET-------------TEEEEEETTTTEEEEEECCT-------TCCTTCEEC--T-TSSEEEE
T ss_pred cCceeEEECCCCeEEEE-EC-------------CEEEEEECCCCceEEccCCc-------ccccCCcCC--C-CCCEEEE
Confidence 35667777776444433 11 35999999998776533321 224556664 1 1345677
Q ss_pred EecCCCCeEEEEEccC-----CeEEEEc
Q psy11539 320 VNDVFRYGLIVYDFFK-----NTSYRLT 342 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~-----g~swRv~ 342 (530)
..| ..|.|+|+.+ ++..++.
T Consensus 138 ~~~---~~i~v~~~~~~~~~~g~~~~~~ 162 (706)
T 2z3z_A 138 VRN---HNLYIARGGKLGEGMSRAIAVT 162 (706)
T ss_dssp EET---TEEEEEECBCTTSCCCCCEESC
T ss_pred EEC---CeEEEEecCcccccCCCcEEec
Confidence 654 6899999999 8777655
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=93.17 E-value=1.3 Score=42.78 Aligned_cols=61 Identities=11% Similarity=0.031 Sum_probs=38.8
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC----CCeEEEEEccCCeEEEEc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF----RYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg----~~gLIVyDl~~g~swRv~ 342 (530)
..|+++|++++++.....- ...+.++++.. ..+...||+++.. ...|.++|..+++..++.
T Consensus 168 ~~l~~~d~~~g~~~~l~~~-------~~~~~~~~~sp--~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 232 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQE-------NQWLGHPIYRP--YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK 232 (388)
T ss_dssp EEEEEEETTTCCEEEEEEE-------SSCEEEEEEET--TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC
T ss_pred ceEEEEECCCCceEEeecC-------CccccccEECC--CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee
Confidence 6799999999976543322 22345666641 0134577888743 458999998877665544
No 175
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=93.16 E-value=7.6 Score=38.76 Aligned_cols=78 Identities=6% Similarity=-0.007 Sum_probs=49.2
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+.+.+++++.+. |.. ...|.+||+.+++.++++.-.. ..+..+.+. .++...+
T Consensus 194 ~V~~v~~~p~~~~l~s--~s~----------D~~i~~wd~~~~~~~~~~~~h~------~~v~~~~~~-----~~g~~l~ 250 (410)
T 1vyh_C 194 NVSSVSIMPNGDHIVS--ASR----------DKTIKMWEVQTGYCVKTFTGHR------EWVRMVRPN-----QDGTLIA 250 (410)
T ss_dssp CEEEEEECSSSSEEEE--EET----------TSEEEEEETTTCCEEEEEECCS------SCEEEEEEC-----TTSSEEE
T ss_pred CEEEEEEeCCCCEEEE--EeC----------CCeEEEEECCCCcEEEEEeCCC------ccEEEEEEC-----CCCCEEE
Confidence 4667778777765442 221 2459999999999988776422 233444443 2344444
Q ss_pred ecCCCCeEEEEEccCCeEEEE
Q psy11539 321 NDVFRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swRv 341 (530)
+=+.+..|.+||+.+++.-..
T Consensus 251 s~s~D~~v~vwd~~~~~~~~~ 271 (410)
T 1vyh_C 251 SCSNDQTVRVWVVATKECKAE 271 (410)
T ss_dssp EEETTSCEEEEETTTCCEEEE
T ss_pred EEcCCCeEEEEECCCCceeeE
Confidence 544567899999998865543
No 176
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=93.08 E-value=7.4 Score=38.43 Aligned_cols=83 Identities=11% Similarity=0.085 Sum_probs=46.9
Q ss_pred EEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccc------------cCccccceEEEe
Q psy11539 242 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVF------------EGSLFSNIVTEV 309 (530)
Q Consensus 242 V~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~------------~~S~lndIvVDv 309 (530)
|..+....+|++.+. |. + -++.+||+.+++++.++.-...... ....+..+.+.
T Consensus 67 V~~v~fspdg~~la~--g~-~----------~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s- 132 (393)
T 1erj_A 67 VCCVKFSNDGEYLAT--GC-N----------KTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFS- 132 (393)
T ss_dssp CCEEEECTTSSEEEE--EC-B----------SCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEEC-
T ss_pred EEEEEECCCCCEEEE--Ec-C----------CcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEEC-
Confidence 455677777776664 32 1 2478899999998877654221100 01123344443
Q ss_pred ecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 310 VEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 310 ~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.++.++... +....|.+||+.+++.-+..
T Consensus 133 ---~dg~~l~s~-~~d~~i~iwd~~~~~~~~~~ 161 (393)
T 1erj_A 133 ---PDGKFLATG-AEDRLIRIWDIENRKIVMIL 161 (393)
T ss_dssp ---TTSSEEEEE-ETTSCEEEEETTTTEEEEEE
T ss_pred ---CCCCEEEEE-cCCCeEEEEECCCCcEEEEE
Confidence 234444443 34568999999998765543
No 177
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.97 E-value=3.3 Score=40.03 Aligned_cols=80 Identities=8% Similarity=0.073 Sum_probs=47.2
Q ss_pred EEEEEEEeCC-CcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 241 SVFRMSVDKC-DRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 241 SV~rv~ID~c-gRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
.|..+....+ +.+.+.=... -.|.+||+++++.+..+..+.........+..+++.. ++...+
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~d------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~~l 230 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSS------------NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP----KNSTRV 230 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSS------------SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS----SCTTEE
T ss_pred CeeEEEeCCCCCcEEEEEcCC------------CCEEEEECCCCCcceEEeccccccccCCceEEEEECC----CCCCEE
Confidence 4566677776 5555542211 2399999999999988877532211134456666651 222223
Q ss_pred EecCCCC---eEEEEEccCC
Q psy11539 320 VNDVFRY---GLIVYDFFKN 336 (530)
Q Consensus 320 ItDsg~~---gLIVyDl~~g 336 (530)
++-.... .|.+||++++
T Consensus 231 ~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 231 ATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp EEEECCSSSCCCCEEETTST
T ss_pred EEEECCCCCceEEEEeCCCC
Confidence 3323333 8999999886
No 178
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=92.96 E-value=7.4 Score=38.11 Aligned_cols=80 Identities=8% Similarity=0.012 Sum_probs=45.8
Q ss_pred eEEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCc-------EEEEEECCCcccccCccccceEEEeec
Q psy11539 240 ISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNT-------LIRKYILPTAQVFEGSLFSNIVTEVVE 311 (530)
Q Consensus 240 vSV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~-------li~~y~~P~~v~~~~S~lndIvVDv~~ 311 (530)
-.|..+.... ++++.+.=. .+ -.|.+||+.+++ .+..+.-. ...+..|.+.
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s--~d----------g~v~vw~~~~~~~~~~~~~~~~~~~~h------~~~v~~~~~~--- 140 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGS--ED----------CTVMVWEIPDGGLVLPLREPVITLEGH------TKRVGIVAWH--- 140 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEE--TT----------SEEEEEECCTTCCSSCBCSCSEEEECC------SSCEEEEEEC---
T ss_pred CCEEEEEeCCCCCCEEEEEe--CC----------CeEEEEEccCCCCccccCCceEEecCC------CCeEEEEEEC---
Confidence 3577778877 665554411 11 349999999884 33333321 2334555554
Q ss_pred CCCCeEEEEecCCCCeEEEEEccCCeEEEE
Q psy11539 312 DCDHVFAYVNDVFRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 312 ~c~~~~AYItDsg~~gLIVyDl~~g~swRv 341 (530)
.++...+++=+.++.|.+||+.+++.-+.
T Consensus 141 -p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 169 (402)
T 2aq5_A 141 -PTAQNVLLSAGCDNVILVWDVGTGAAVLT 169 (402)
T ss_dssp -SSBTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred -cCCCCEEEEEcCCCEEEEEECCCCCccEE
Confidence 12223444434556899999999865543
No 179
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=92.88 E-value=2.9 Score=44.68 Aligned_cols=84 Identities=8% Similarity=-0.056 Sum_probs=47.0
Q ss_pred eEEEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcc------cccC------------c
Q psy11539 240 ISVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQ------VFEG------------S 300 (530)
Q Consensus 240 vSV~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v------~~~~------------S 300 (530)
.++..+.+..+|+ |+.......+ .....|.+||+.+++..+........ .... .
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~-------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSD-------RNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMT 109 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSC-------TTEEEEEEEETTTCCEEEEECGGGTC--------------------CCE
T ss_pred CCCCCceEecCCCEEEEEeccCCC-------CcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhcccc
Confidence 4566778888776 5555431000 01246999999999887766542211 0000 1
Q ss_pred cccceEEEeecCCCCeEEEEecCCCCeEEEEEccCC
Q psy11539 301 LFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKN 336 (530)
Q Consensus 301 ~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g 336 (530)
.+..+++. .++.+++++.. ..|.+||+.++
T Consensus 110 ~v~~~~~S----pDg~~l~~~~~--~~i~~~d~~~~ 139 (741)
T 2ecf_A 110 GIVDYQWS----PDAQRLLFPLG--GELYLYDLKQE 139 (741)
T ss_dssp ESCCCEEC----TTSSEEEEEET--TEEEEEESSSC
T ss_pred CcceeEEC----CCCCEEEEEeC--CcEEEEECCCC
Confidence 13445553 24444444443 68999999887
No 180
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=92.82 E-value=4.6 Score=42.13 Aligned_cols=22 Identities=5% Similarity=-0.040 Sum_probs=19.6
Q ss_pred EcCCCcEEEEccCCCeEEEEeC
Q psy11539 464 INSNGVMFYNLVTKHSVGCWNT 485 (530)
Q Consensus 464 iD~~G~LYft~~~~~aI~cWnt 485 (530)
++.+|.||++....+.+..|+.
T Consensus 253 ~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 253 YLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp ECTTSCEEEEEEETTEEEEEET
T ss_pred EcCCCcEEEEEEcCCcEEEEEE
Confidence 7888899999888889999987
No 181
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=92.64 E-value=3.1 Score=38.86 Aligned_cols=57 Identities=11% Similarity=0.078 Sum_probs=36.9
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEE
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swR 340 (530)
..|.+||+.+++++..+.-. ...+..|++. .++.+++.+ +.+..|.+||+.+++.-+
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h------~~~v~~~~~s----~~~~~l~s~-s~Dg~i~iwd~~~~~~~~ 251 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGH------TGYLNTVTVS----PDGSLCASG-GKDGQAMLWDLNEGKHLY 251 (340)
T ss_dssp SCEEEEETTTTEEEEEECCC------SSCEEEEEEC----TTSSEEEEE-ETTCEEEEEETTTTEEEE
T ss_pred CEEEEEECCCCceeeEecCC------CCcEEEEEEC----CCCCEEEEE-eCCCeEEEEEeccCceee
Confidence 35889999999888766432 2335566665 234444444 345689999999886554
No 182
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=92.44 E-value=8 Score=37.15 Aligned_cols=61 Identities=15% Similarity=0.243 Sum_probs=38.5
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
++.+||++++++++.+.++.. ..+..+.+.. ..++.+ .++=+.+..|.+||+++++..++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~--~~~~~~-l~s~s~dg~i~~wd~~~~~~~~~~ 165 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSA-----NEIIYMYGHN--EVNTEY-FIWADNRGTIGFQSYEDDSQYIVH 165 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCS-----SCEEEEECCC-----CCE-EEEEETTCCEEEEESSSSCEEEEE
T ss_pred ceEEeecCCcceeEEeecCCC-----CCEEEEEcCC--CCCCCE-EEEEeCCCcEEEEECCCCcEEEEE
Confidence 588899999999988887432 2244455441 002233 343345568999999999876544
No 183
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=92.35 E-value=3.5 Score=38.70 Aligned_cols=63 Identities=5% Similarity=-0.024 Sum_probs=36.3
Q ss_pred EEEEEECCCCc-EEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEE
Q psy11539 274 KIMVFDLKTNT-LIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSY 339 (530)
Q Consensus 274 KLvvfDL~Td~-li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~sw 339 (530)
.|.+||+.+++ .++.+...... .......+++.+.-..++.+++.+. ....|.+||+++++..
T Consensus 140 ~i~vwd~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~ 203 (357)
T 3i2n_A 140 TVKVWDPRQKDDPVANMEPVQGE--NKRDCWTVAFGNAYNQEERVVCAGY-DNGDIKLFDLRNMALR 203 (357)
T ss_dssp CEEEECTTSCSSCSEEECCCTTS--CCCCEEEEEEECCCC-CCCEEEEEE-TTSEEEEEETTTTEEE
T ss_pred eEEEEeCCCCCCcceeccccCCC--CCCceEEEEEEeccCCCCCEEEEEc-cCCeEEEEECccCcee
Confidence 48999999886 66666543321 1223455554321112344444443 4468999999998653
No 184
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.29 E-value=3.5 Score=40.98 Aligned_cols=124 Identities=10% Similarity=0.022 Sum_probs=66.5
Q ss_pred eeeEE-eCCeEEEEccCCCCCCCcEEEEEECCCCCCCC-ccCCCCCCCcCCCCCCCCceEEEEEEEeCCCcEEEE-eCCC
Q psy11539 184 LGIGI-WRSTIFLSFPKWKAGIPFTLASFNMNDPSESP-ILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIM-DTGV 260 (530)
Q Consensus 184 ~GV~v-~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP-~L~PYPsw~wn~~~nc~~LvSV~rv~ID~cgRLWVL-DtG~ 260 (530)
.|.-. .++.||.+-++ + ...|-.++.+ +..+ +|. + .++--+.+|. +.|+.+ +...
T Consensus 18 ~g~~~~~g~~iy~~n~~--d--~~~ly~~~~d--g~~~~~l~-------------~--~~~~~i~~~g-~~Iyy~~~~~~ 75 (302)
T 3s25_A 18 AGLFCESDGEVFFSNTN--D--NGRLYAMNID--GSNIHKLS-------------N--DTAMYINADK-NYVYYVRNNNQ 75 (302)
T ss_dssp TTCEEEETTEEEEEEGG--G--TTEEEEEETT--SCSCEEEE-------------E--EEEEEEEECS-SEEEEEEECC-
T ss_pred ceEEEEeCCEEEEEeCC--C--CceEEEEcCC--CCCCEEcc-------------C--CceeeEEEcC-CEEEEEECCCC
Confidence 44444 48999999775 2 2478888764 2222 121 0 1233445554 445544 3322
Q ss_pred CCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEec---CCCCeEEEEEccCCe
Q psy11539 261 TNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVND---VFRYGLIVYDFFKNT 337 (530)
Q Consensus 261 ~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItD---sg~~gLIVyDl~~g~ 337 (530)
..........-.-+|..+++.+.+..+....+ -..+.++ +.++|.+| .+...|.+.++....
T Consensus 76 ~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~---------~~~~s~~------g~~Iy~~~~~~~~~~~Iy~~~~dGs~ 140 (302)
T 3s25_A 76 KITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP---------CIYASLI------GNYIYYLHYDTQTATSLYRIRIDGEE 140 (302)
T ss_dssp -----CCSSCCSEEEEEEETTSCCCEEEECSC---------EEEEEEE------TTEEEEEEESSSSCEEEEEEETTSCC
T ss_pred cccccceeccCCCeEEEEeCCCCcceEeecCC---------ccEEEEe------CCEEEEEeecCCCCceEEEEECCCCC
Confidence 11000000012346888998877543321111 1245555 57899988 678889999999776
Q ss_pred EEEEcCC
Q psy11539 338 SYRLTHP 344 (530)
Q Consensus 338 swRv~h~ 344 (530)
..||...
T Consensus 141 ~~~lt~~ 147 (302)
T 3s25_A 141 KKKIKNH 147 (302)
T ss_dssp CEEEESS
T ss_pred eEEEeCC
Confidence 6666643
No 185
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.21 E-value=2.1 Score=45.52 Aligned_cols=60 Identities=13% Similarity=0.113 Sum_probs=29.3
Q ss_pred EEEEECCCCcEE-EEEECCCccc---ccC--------ccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 275 IMVFDLKTNTLI-RKYILPTAQV---FEG--------SLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 275 LvvfDL~Td~li-~~y~~P~~v~---~~~--------S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
| +||++|++.+ +.+.-+..+. ... ..+..+++. + ++..+|.+| ..|.+||+.+++..++.
T Consensus 46 i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~s--p--d~~~~~~~~---~~i~~~d~~~~~~~~l~ 117 (706)
T 2z3z_A 46 L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDA--G--RGLVVLFTQ---GGLVGFDMLARKVTYLF 117 (706)
T ss_dssp E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEET--T--TTEEEEEET---TEEEEEETTTTEEEEEE
T ss_pred E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEEC--C--CCeEEEEEC---CEEEEEECCCCceEEcc
Confidence 7 8999888773 3332111110 000 123445543 2 355666665 68999999998766554
No 186
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=92.18 E-value=11 Score=40.46 Aligned_cols=79 Identities=11% Similarity=0.166 Sum_probs=47.9
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+.+..+|++-+. |..+ -.|.+||+.+++.++++.-.. ..+..+++. .++.++ +
T Consensus 432 ~v~~v~~s~~g~~l~s--gs~D----------g~v~vwd~~~~~~~~~~~~h~------~~v~~~~~s----~~~~~l-~ 488 (694)
T 3dm0_A 432 FVEDVVLSSDGQFALS--GSWD----------GELRLWDLAAGVSTRRFVGHT------KDVLSVAFS----LDNRQI-V 488 (694)
T ss_dssp CEEEEEECTTSSEEEE--EETT----------SEEEEEETTTTEEEEEEECCS------SCEEEEEEC----TTSSCE-E
T ss_pred cEEEEEECCCCCEEEE--EeCC----------CcEEEEECCCCcceeEEeCCC------CCEEEEEEe----CCCCEE-E
Confidence 4566677777765442 2211 459999999999888765422 223445554 223333 3
Q ss_pred ecCCCCeEEEEEccCCeEEEEc
Q psy11539 321 NDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swRv~ 342 (530)
+=+.+..|.+||......+.+.
T Consensus 489 s~s~D~~i~iwd~~~~~~~~~~ 510 (694)
T 3dm0_A 489 SASRDRTIKLWNTLGECKYTIS 510 (694)
T ss_dssp EEETTSCEEEECTTSCEEEEEC
T ss_pred EEeCCCEEEEEECCCCcceeec
Confidence 4445678999998877666554
No 187
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=92.10 E-value=7.8 Score=36.29 Aligned_cols=76 Identities=13% Similarity=0.176 Sum_probs=45.9
Q ss_pred EEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEe
Q psy11539 242 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 321 (530)
Q Consensus 242 V~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYIt 321 (530)
|..+....++.+.+. |.. .-+|.+||+++++.++.+.... ..+..+.+. .++.+++.+
T Consensus 110 v~~~~~~~~~~~l~s--~~~----------d~~i~iwd~~~~~~~~~~~~~~------~~v~~~~~~----~~~~~l~~~ 167 (312)
T 4ery_A 110 VFCCNFNPQSNLIVS--GSF----------DESVRIWDVKTGKCLKTLPAHS------DPVSAVHFN----RDGSLIVSS 167 (312)
T ss_dssp EEEEEECSSSSEEEE--EET----------TSCEEEEETTTCCEEEEECCCS------SCEEEEEEC----TTSSEEEEE
T ss_pred EEEEEEcCCCCEEEE--EeC----------CCcEEEEECCCCEEEEEecCCC------CcEEEEEEc----CCCCEEEEE
Confidence 455666666665443 111 1349999999999887665422 224455554 234444444
Q ss_pred cCCCCeEEEEEccCCeEEE
Q psy11539 322 DVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 322 Dsg~~gLIVyDl~~g~swR 340 (530)
. ....|.+||+++++.-+
T Consensus 168 ~-~d~~i~~wd~~~~~~~~ 185 (312)
T 4ery_A 168 S-YDGLCRIWDTASGQCLK 185 (312)
T ss_dssp E-TTSCEEEEETTTCCEEE
T ss_pred e-CCCcEEEEECCCCceee
Confidence 3 45689999999886544
No 188
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=92.07 E-value=7.9 Score=36.27 Aligned_cols=78 Identities=8% Similarity=0.004 Sum_probs=48.4
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
..|..+.+.+++++.+. |..+ -.|.+||+.+++.++.+.-. ...+..+++. .++.++.
T Consensus 24 ~~v~~~~~s~~~~~l~s--~~~d----------g~i~iw~~~~~~~~~~~~~h------~~~v~~~~~~----~~~~~l~ 81 (312)
T 4ery_A 24 KAVSSVKFSPNGEWLAS--SSAD----------KLIKIWGAYDGKFEKTISGH------KLGISDVAWS----SDSNLLV 81 (312)
T ss_dssp SCEEEEEECTTSSEEEE--EETT----------SCEEEEETTTCCEEEEECCC------SSCEEEEEEC----TTSSEEE
T ss_pred CcEEEEEECCCCCEEEE--eeCC----------CeEEEEeCCCcccchhhccC------CCceEEEEEc----CCCCEEE
Confidence 45777788888875543 1111 23899999999988765432 2234556664 2334444
Q ss_pred EecCCCCeEEEEEccCCeEEE
Q psy11539 320 VNDVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~swR 340 (530)
.. +....|.+||+.+++.-+
T Consensus 82 s~-~~d~~i~vwd~~~~~~~~ 101 (312)
T 4ery_A 82 SA-SDDKTLKIWDVSSGKCLK 101 (312)
T ss_dssp EE-ETTSEEEEEETTTCCEEE
T ss_pred EE-CCCCEEEEEECCCCcEEE
Confidence 33 345689999999886543
No 189
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=92.04 E-value=2.1 Score=41.18 Aligned_cols=141 Identities=12% Similarity=0.201 Sum_probs=77.9
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQ 352 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~ 352 (530)
-.|.+||+.+.+++..+.-. ...+..+++. .++.++. +=+.+..|.+||+.+++.-+....
T Consensus 176 ~~i~~wd~~~~~~~~~~~~h------~~~v~~~~~s----p~g~~l~-s~~~dg~i~iwd~~~~~~~~~~~~-------- 236 (319)
T 3frx_A 176 KMVKAWNLNQFQIEADFIGH------NSNINTLTAS----PDGTLIA-SAGKDGEIMLWNLAAKKAMYTLSA-------- 236 (319)
T ss_dssp SCEEEEETTTTEEEEEECCC------CSCEEEEEEC----TTSSEEE-EEETTCEEEEEETTTTEEEEEEEC--------
T ss_pred CEEEEEECCcchhheeecCC------CCcEEEEEEc----CCCCEEE-EEeCCCeEEEEECCCCcEEEEecC--------
Confidence 34788999888777654321 2334556654 1333433 333456899999998865443211
Q ss_pred ceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeCCCCeeEEEecchhc
Q psy11539 353 STYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLR 432 (530)
Q Consensus 353 ~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lr 432 (530)
.+.+..++++|++ +.|....-.+.++|.+++..+.
T Consensus 237 ------------~~~v~~~~~sp~~---------------------------------~~la~~~~~~i~v~~~~~~~~~ 271 (319)
T 3frx_A 237 ------------QDEVFSLAFSPNR---------------------------------YWLAAATATGIKVFSLDPQYLV 271 (319)
T ss_dssp ------------CSCEEEEEECSSS---------------------------------SEEEEEETTEEEEEEETTEEEE
T ss_pred ------------CCcEEEEEEcCCC---------------------------------CEEEEEcCCCcEEEEeCcCeee
Confidence 1234578888875 4444444444566666544332
Q ss_pred CccccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 433 NSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 433 n~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
.... ..+.... .........+++..+|.++++--..+.|..||..
T Consensus 272 ~~~~--------~~~~~~~-~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 272 DDLR--------PEFAGYS-KAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp EEEC--------CCCTTCC-GGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred eccC--------ccccccc-cCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 1110 0000000 0001123456777888888887788889999865
No 190
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.02 E-value=10 Score=37.52 Aligned_cols=55 Identities=11% Similarity=0.071 Sum_probs=35.7
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.+|...++..... +++.- .. . +.+|. .+..+|.+|.+.+.|.+.++..+...|+.
T Consensus 129 ~~Iy~~~~dGs~~-~~lt~-~~-----~----~~~~~----~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~ 183 (302)
T 3s25_A 129 TSLYRIRIDGEEK-KKIKN-HY-----L----FTCNT----SDRYFYYNNPKNGQLYRYDTASQSEALFY 183 (302)
T ss_dssp EEEEEEETTSCCC-EEEES-SC-----C----CCSEE----ETTEEEEECTTTCCEEEEETTTTEEEEEE
T ss_pred ceEEEEECCCCCe-EEEeC-CC-----c----eEeeE----ECCEEEEEeCCCceEEEEECCCCCEEEEe
Confidence 5699999965432 22222 11 1 12332 25688999888899999999988766653
No 191
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=91.95 E-value=19 Score=40.95 Aligned_cols=61 Identities=18% Similarity=0.173 Sum_probs=36.8
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC--------CCeEEEEEccCCeEEEEc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF--------RYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg--------~~gLIVyDl~~g~swRv~ 342 (530)
..|.+||++++++.....-. ...+..+++. + .+...||.+... ...|.+||+.+++..++.
T Consensus 400 ~~v~~~d~~tg~~~~~~~~~------~~~v~~~~~S--p-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 400 FEIMTVDLETGKPTVIERSR------EAMITDFTIS--D-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp SEEEEEETTTCCEEEEEECS------SSCCCCEEEC--T-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred CeEEEEECCCCceEEeccCC------CCCccceEEC--C-CCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 47888999888877654321 1223455554 1 123355655422 358999999999754443
No 192
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=91.64 E-value=4.5 Score=40.57 Aligned_cols=170 Identities=13% Similarity=0.123 Sum_probs=91.5
Q ss_pred EEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECCCC---cEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 241 SVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN---TLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 241 SV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td---~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
.|..+.... .+.+.+...+. -+|.+||+.++ +.+..+.- ..+.++.|.+. ..+.
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~d------------g~i~i~d~~~~~~~~~~~~~~~------~~~~v~~i~~~----p~~~ 290 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVADD------------QKLMIWDTRNNNTSKPSHTVDA------HTAEVNCLSFN----PYSE 290 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETT------------SEEEEEETTCSCSSSCSEEEEC------CSSCEEEEEEC----SSCT
T ss_pred CEeeeEEeCCCCCEEEEEeCC------------CeEEEEECCCCCCCcceeEeec------CCCCeEEEEeC----CCCC
Confidence 466677776 55666654432 34999999887 45554432 12345666665 2345
Q ss_pred EEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccc
Q psy11539 317 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHH 396 (530)
Q Consensus 317 ~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~ 396 (530)
+++++=...+.|.+||+++... +. ..+. + -...+..|+++|++
T Consensus 291 ~~l~tg~~dg~v~vwd~~~~~~-----------~~-~~~~--~----h~~~v~~i~~sp~~------------------- 333 (430)
T 2xyi_A 291 FILATGSADKTVALWDLRNLKL-----------KL-HSFE--S----HKDEIFQVQWSPHN------------------- 333 (430)
T ss_dssp TEEEEEETTSEEEEEETTCTTS-----------CS-EEEE--C----CSSCEEEEEECSSC-------------------
T ss_pred CEEEEEeCCCeEEEEeCCCCCC-----------Ce-EEee--c----CCCCEEEEEECCCC-------------------
Confidence 6677666677899999987421 00 0111 1 01245678888875
Q ss_pred cCCccccccccCCCceEEEEeCCCCeeEEEecchhcCccccCCcccc-ccceEEe-ccccCCCCCcceEEcCCCc-EEEE
Q psy11539 397 YNGTNVDKTIRDDQRYMYFHSMSSNRHYYVSTTDLRNSSRYVNSSDI-DEYFHYL-GSRFKNTQASASAINSNGV-MFYN 473 (530)
Q Consensus 397 ~~~~~~~~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~s~~~~~~~~-~~~v~~l-G~rG~~sqs~G~aiD~~G~-LYft 473 (530)
+.++...-....+...+..............+. ...+..+ |.. .....++++.+|. ++++
T Consensus 334 --------------~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~~l~s 396 (430)
T 2xyi_A 334 --------------ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT---AKISDFSWNPNEPWIICS 396 (430)
T ss_dssp --------------TTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCS---SCEEEEEECSSSTTEEEE
T ss_pred --------------CCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCC---CCceEEEECCCCCCEEEE
Confidence 333333333323333333222111100000000 0112222 222 2466778888887 8888
Q ss_pred ccCCCeEEEEeCC
Q psy11539 474 LVTKHSVGCWNTK 486 (530)
Q Consensus 474 ~~~~~aI~cWnt~ 486 (530)
.-..+.|.+|+..
T Consensus 397 ~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 397 VSEDNIMQVWQMA 409 (430)
T ss_dssp EETTSEEEEEEEC
T ss_pred EECCCCEEEeEcc
Confidence 8888999999988
No 193
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.47 E-value=13 Score=37.48 Aligned_cols=60 Identities=12% Similarity=-0.016 Sum_probs=34.0
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecC-CCCeEEEEEccCCeEEEEc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV-FRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs-g~~gLIVyDl~~g~swRv~ 342 (530)
-.|.+||+.+..+ +++.- .......+++. + .+...||.++. +...|.+||+++++..++.
T Consensus 159 ~~i~i~d~~g~~~-~~l~~------~~~~v~~~~~S--p-dg~~la~~s~~~~~~~i~~~d~~tg~~~~l~ 219 (415)
T 2hqs_A 159 YELRVSDYDGYNQ-FVVHR------SPQPLMSPAWS--P-DGSKLAYVTFESGRSALVIQTLANGAVRQVA 219 (415)
T ss_dssp EEEEEEETTSCSC-EEEEE------ESSCEEEEEEC--T-TSSEEEEEECTTSSCEEEEEETTTCCEEEEE
T ss_pred ceEEEEcCCCCCC-EEEeC------CCCcceeeEEc--C-CCCEEEEEEecCCCcEEEEEECCCCcEEEee
Confidence 3577777764432 22221 11223344443 2 13457777754 4578999999999776544
No 194
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=91.37 E-value=7.6 Score=38.22 Aligned_cols=59 Identities=15% Similarity=0.188 Sum_probs=40.5
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEE
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swR 340 (530)
-.|.+||+++++.++++..+.. ...+..+++. .++.++..+. ..+.|.+||+++++.-+
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h----~~~v~~~~~s----~~~~~l~s~~-~dg~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPR----HGAVSSICID----EECCVLILGT-TRGIIDIWDIRFNVLIR 250 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGG----GCCEEEEEEC----TTSCEEEEEE-TTSCEEEEETTTTEEEE
T ss_pred CeEEEEeCCCCeeeEEEccCCC----CCceEEEEEC----CCCCEEEEEc-CCCeEEEEEcCCccEEE
Confidence 4699999999999988876421 2345666765 2344454443 44679999999886654
No 195
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=91.34 E-value=7.5 Score=38.99 Aligned_cols=76 Identities=9% Similarity=0.044 Sum_probs=48.2
Q ss_pred EEEEEEEeCCCcEE-EEeCCCCCcccCccccCCCEEEEEECC--CCcEEEEEECCCcccccCccccceEEEeecCCCCeE
Q psy11539 241 SVFRMSVDKCDRLW-IMDTGVTNILSSIQQLCPPKIMVFDLK--TNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 317 (530)
Q Consensus 241 SV~rv~ID~cgRLW-VLDtG~~~~~~~~~~~c~PKLvvfDL~--Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~ 317 (530)
.|..+.+..+|++. +.= +. + -.|.+||+. +++.++.+.... .......+++. .++.+
T Consensus 104 ~v~~~~~s~d~~~l~~~~-~~-d----------g~v~iwd~~~~~~~~~~~~~~~~----~~~~v~~~~~s----p~~~~ 163 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACA-DS-D----------KSLLVFDVDKTSKNVLKLRKRFC----FSKRPNAISIA----EDDTT 163 (450)
T ss_dssp CEEEEEECTTSSEEEEEE-GG-G----------TEEEEEEECSSSSSCEEEEEEEE----CSSCEEEEEEC----TTSSE
T ss_pred ceEEEEEcCCCCEEEEEE-CC-C----------CeEEEEECcCCCCceeeeeeccc----CCCCceEEEEc----CCCCE
Confidence 57788888888764 431 11 1 348999998 888877664210 11234556665 34567
Q ss_pred EEEecCCCCeEEEEEccCCe
Q psy11539 318 AYVNDVFRYGLIVYDFFKNT 337 (530)
Q Consensus 318 AYItDsg~~gLIVyDl~~g~ 337 (530)
++.++. ...|.+|++.+++
T Consensus 164 l~~~~~-~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 164 VIIADK-FGDVYSIDINSIP 182 (450)
T ss_dssp EEEEET-TSEEEEEETTSCC
T ss_pred EEEEeC-CCcEEEEecCCcc
Confidence 777765 4568888887764
No 196
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=91.29 E-value=9.6 Score=35.70 Aligned_cols=59 Identities=14% Similarity=0.126 Sum_probs=39.2
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.|.+||+.++++++.+.-. ...+..+.+.. .++.+++... ..+.|.+||+.+++..+..
T Consensus 96 ~i~v~d~~~~~~~~~~~~~------~~~i~~~~~~~---~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGH------GNAINELKFHP---RDPNLLLSVS-KDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp EEEEECTTTCCEEEEEESC------CSCEEEEEECS---SCTTEEEEEE-TTSCEEEEETTTTEEEEEE
T ss_pred EEEEEEchhceEeeeecCC------CCcEEEEEECC---CCCCEEEEEe-CCCeEEEEEeecCeEEEEe
Confidence 5999999999998877632 23345566641 0233444433 3567999999999877765
No 197
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=91.26 E-value=9.9 Score=35.79 Aligned_cols=29 Identities=7% Similarity=0.115 Sum_probs=23.5
Q ss_pred CCcceEEcCC---CcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSN---GVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~---G~LYft~~~~~aI~cWnt~ 486 (530)
.-..++++.+ |.++++.-..+.|..||..
T Consensus 208 ~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 208 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 239 (379)
T ss_dssp CEEEEEECCCCSSSEEEEEEETTSCEEEEEES
T ss_pred cEeEEEECCCCCCCCeEEEEeCCCEEEEEeCC
Confidence 4556778877 7888888888899999987
No 198
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=91.25 E-value=12 Score=36.60 Aligned_cols=29 Identities=7% Similarity=0.097 Sum_probs=24.5
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
.-..++++.+|.++++-...+.|..||..
T Consensus 242 ~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 242 DVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp CEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred cEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 45567888889998888888999999986
No 199
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.19 E-value=11 Score=39.18 Aligned_cols=28 Identities=7% Similarity=0.067 Sum_probs=19.8
Q ss_pred CCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 314 DHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 314 ~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.++.+|++... .++++||+++++..++.
T Consensus 121 g~~~~~~s~~~-~~~~l~d~~~g~~~~l~ 148 (582)
T 3o4h_A 121 GEAVVFTGATE-DRVALYALDGGGLRELA 148 (582)
T ss_dssp SSCEEEEEECS-SCEEEEEEETTEEEEEE
T ss_pred CCeEEEEecCC-CCceEEEccCCcEEEee
Confidence 45677777655 45669999999776655
No 200
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=90.80 E-value=11 Score=35.49 Aligned_cols=77 Identities=6% Similarity=-0.018 Sum_probs=42.4
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCC--cEEEEEECCCcccccCccccceEEEeecCCCCeE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN--TLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 317 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td--~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~ 317 (530)
-.|..+....++++.+. |..+ -.|.+||+.++ +.++.+.-. ...+..+++. .+.++.+
T Consensus 12 ~~v~~~~~s~~~~~l~~--~~~d----------g~i~iw~~~~~~~~~~~~~~~h------~~~v~~~~~~--~~~~~~~ 71 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLAT--CSSD----------KTIKIFEVEGETHKLIDTLTGH------EGPVWRVDWA--HPKFGTI 71 (379)
T ss_dssp CCEEEEEECSSSSEEEE--EETT----------SCEEEEEEETTEEEEEEEECCC------SSCEEEEEEC--CGGGCSE
T ss_pred ccEEEEEEcCCCCEEEE--EECC----------CcEEEEecCCCcceeeeEecCC------CCcEEEEEeC--CCCCCCE
Confidence 34667777777765443 1111 23889999744 444433321 2234445543 1111445
Q ss_pred EEEecCCCCeEEEEEccCCe
Q psy11539 318 AYVNDVFRYGLIVYDFFKNT 337 (530)
Q Consensus 318 AYItDsg~~gLIVyDl~~g~ 337 (530)
++.+.. ...|.+||+.+++
T Consensus 72 l~s~~~-dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 72 LASCSY-DGKVLIWKEENGR 90 (379)
T ss_dssp EEEEET-TSCEEEEEEETTE
T ss_pred EEEecc-CCEEEEEEcCCCc
Confidence 555543 4679999999985
No 201
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=90.75 E-value=19 Score=38.09 Aligned_cols=29 Identities=14% Similarity=0.202 Sum_probs=24.7
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
.-..+++..+|.+.++......|..|+..
T Consensus 493 ~v~~v~fspdg~~las~s~d~~v~~w~~~ 521 (611)
T 1nr0_A 493 EITSVAFSNNGAFLVATDQSRKVIPYSVA 521 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEGG
T ss_pred ceEEEEECCCCCEEEEEcCCCCEEEEEcC
Confidence 45677888999999888888999999987
No 202
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=90.61 E-value=1.6 Score=41.97 Aligned_cols=29 Identities=7% Similarity=-0.024 Sum_probs=23.0
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
.-..+++..+|.++++-...+.|..||..
T Consensus 148 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 176 (377)
T 3dwl_C 148 TILSLDWHPNNVLLAAGCADRKAYVLSAY 176 (377)
T ss_dssp CEEEEEECTTSSEEEEEESSSCEEEEEEC
T ss_pred CeEEEEEcCCCCEEEEEeCCCEEEEEEEE
Confidence 45567778888888887778899999974
No 203
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=89.76 E-value=14 Score=35.13 Aligned_cols=29 Identities=10% Similarity=0.179 Sum_probs=22.0
Q ss_pred CCcceEEcCCCc-EEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNGV-MFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G~-LYft~~~~~aI~cWnt~ 486 (530)
.-..+++..+|. |+++....+.|..||..
T Consensus 188 ~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~ 217 (408)
T 4a11_B 188 EILAVSWSPRYDYILATASADSRVKLWDVR 217 (408)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred cEEEEEECCCCCcEEEEEcCCCcEEEEECC
Confidence 345677777766 67777778889999986
No 204
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.69 E-value=24 Score=37.71 Aligned_cols=72 Identities=11% Similarity=0.099 Sum_probs=45.8
Q ss_pred EEEEEEeCCCcEEEE-eCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 242 VFRMSVDKCDRLWIM-DTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 242 V~rv~ID~cgRLWVL-DtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
|..+...+++++.+. .. ...|.+||+.+++.+.++.-.. ..+..+.+. .++.++..
T Consensus 58 v~~~~~s~~~~~l~~~~~-------------dg~i~vw~~~~~~~~~~~~~~~------~~v~~~~~s----~~~~~l~~ 114 (814)
T 3mkq_A 58 VRAGKFIARKNWIIVGSD-------------DFRIRVFNYNTGEKVVDFEAHP------DYIRSIAVH----PTKPYVLS 114 (814)
T ss_dssp EEEEEEEGGGTEEEEEET-------------TSEEEEEETTTCCEEEEEECCS------SCEEEEEEC----SSSSEEEE
T ss_pred EEEEEEeCCCCEEEEEeC-------------CCeEEEEECCCCcEEEEEecCC------CCEEEEEEe----CCCCEEEE
Confidence 566677776664443 21 1359999999999988776422 234555554 23445555
Q ss_pred ecCCCCeEEEEEccCCe
Q psy11539 321 NDVFRYGLIVYDFFKNT 337 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~ 337 (530)
+. ..+.|.+||+.++.
T Consensus 115 ~~-~dg~i~vw~~~~~~ 130 (814)
T 3mkq_A 115 GS-DDLTVKLWNWENNW 130 (814)
T ss_dssp EE-TTSEEEEEEGGGTS
T ss_pred Ec-CCCEEEEEECCCCc
Confidence 44 34689999999873
No 205
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=89.54 E-value=23 Score=38.67 Aligned_cols=69 Identities=3% Similarity=0.012 Sum_probs=43.4
Q ss_pred EEEEEEC-CCCcEEEEEECCCccccc-----CccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeE-EEEcC
Q psy11539 274 KIMVFDL-KTNTLIRKYILPTAQVFE-----GSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS-YRLTH 343 (530)
Q Consensus 274 KLvvfDL-~Td~li~~y~~P~~v~~~-----~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~s-wRv~h 343 (530)
+|+++|+ +||+++=++.+....... ...-..+++....+-....+|+... ...|+.+|.++|+. |+...
T Consensus 74 ~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-dg~l~AlDa~TG~~~W~~~~ 149 (599)
T 1w6s_A 74 NTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-DGNVAALNAETGETVWKVEN 149 (599)
T ss_dssp CEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT-TSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC-CCEEEEEECCCCCEEEeecC
Confidence 4999999 999999999886542110 0112346662101101123888864 45899999988875 88753
No 206
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=89.33 E-value=14 Score=34.49 Aligned_cols=61 Identities=7% Similarity=-0.014 Sum_probs=40.8
Q ss_pred CcceEEcCCCcEEEEccCCCeEEEEeCCCCccccCceeEEeecCCceeecceeEEecCCcEEEEEeec
Q psy11539 459 ASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVN 526 (530)
Q Consensus 459 s~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~sn 526 (530)
...++++.+|.++++--..+.|..||..++ ..+..-...-....++++..+|...+++..+
T Consensus 276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d 336 (368)
T 3mmy_A 276 VNGIAFHPVHGTLATVGSDGRFSFWDKDAR-------TKLKTSEQLDQPISACCFNHNGNIFAYASSY 336 (368)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTT-------EEEEECCCCSSCEEEEEECTTSSCEEEEECC
T ss_pred eEEEEEecCCCEEEEEccCCeEEEEECCCC-------cEEEEecCCCCCceEEEECCCCCeEEEEecc
Confidence 456788888877787778889999999822 1222211223346678888888777766554
No 207
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=89.21 E-value=17 Score=35.37 Aligned_cols=75 Identities=8% Similarity=0.092 Sum_probs=45.6
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+....+|++.+. |.-+ .+.+||+.+++.+....++. ...+.+. . ....+.+
T Consensus 21 ~V~~v~fs~dg~~la~--g~~~-----------~~~iw~~~~~~~~~~~~~~~--------~~~~~~~--~--~~~~~~~ 75 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLIL--STLK-----------SFEIYNVHPVAHIMSQEMRH--------LSKVRML--H--RTNYVAF 75 (355)
T ss_dssp CCCEEEECTTSSEEEE--ECSS-----------EEEEEEETTEEEEEEEECSC--------CCEEEEC--T--TSSEEEE
T ss_pred ceEEEEECCCCCEEEE--EcCC-----------EEEEEecCCcceeeeeecCC--------eEEEEEc--C--CCCEEEE
Confidence 4566788888887664 3211 26799998888777666531 1222222 1 2334444
Q ss_pred ecCCCCeEEEEEccCCeEEE
Q psy11539 321 NDVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swR 340 (530)
+=.+...|.+||..+++.-.
T Consensus 76 ~~~~d~~v~iWd~~~~~~~~ 95 (355)
T 3vu4_A 76 VTGVKEVVHIWDDVKKQDVS 95 (355)
T ss_dssp ECSSTTEEEEEETTTTEEEE
T ss_pred EECCccEEEEEECCCCcEEE
Confidence 44455699999999987644
No 208
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=88.99 E-value=16 Score=34.82 Aligned_cols=29 Identities=10% Similarity=0.240 Sum_probs=23.4
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
.-..++++.+|.++++....+.|.+||..
T Consensus 249 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 277 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASDDGTLRIWHGG 277 (425)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEECSS
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 34567788888888887788899999987
No 209
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=88.88 E-value=17 Score=35.01 Aligned_cols=28 Identities=4% Similarity=0.055 Sum_probs=21.8
Q ss_pred CcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 459 ASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 459 s~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
-..+++..+|.++++-...+.|..|+..
T Consensus 153 v~~~~~~p~~~~l~s~s~d~~i~~w~~~ 180 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYDDTVKLYREE 180 (345)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEec
Confidence 4456777778888887788889999976
No 210
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=88.81 E-value=17 Score=34.80 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=24.1
Q ss_pred CCCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 457 TQASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 457 sqs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
.....++++.+| ++++....+.|..||..
T Consensus 187 ~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~ 215 (397)
T 1sq9_A 187 QFATSVDISERG-LIATGFNNGTVQISELS 215 (397)
T ss_dssp CCCCEEEECTTS-EEEEECTTSEEEEEETT
T ss_pred CCceEEEECCCc-eEEEEeCCCcEEEEECC
Confidence 346778888888 88887888999999987
No 211
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=88.64 E-value=21 Score=35.56 Aligned_cols=78 Identities=15% Similarity=0.116 Sum_probs=48.5
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
-.|..+...+.+.+-+. |..+ -.|.+||+.++++++++.-.. .....+.+. .++...
T Consensus 109 ~~V~~~~~~p~~~~l~s--~s~D----------g~i~vwd~~~~~~~~~l~~h~------~~V~~v~~~-----~~~~~l 165 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVS--ASED----------ATIKVWDYETGDFERTLKGHT------DSVQDISFD-----HSGKLL 165 (410)
T ss_dssp SCEEEEEECSSSSEEEE--EESS----------SCEEEEETTTCCCCEEECCCS------SCEEEEEEC-----TTSSEE
T ss_pred CcEEEEEEcCCCCEEEE--EeCC----------CeEEEEECCCCcEEEEEeccC------CcEEEEEEc-----CCCCEE
Confidence 35677777777765443 2111 249999999999887665422 234556665 223334
Q ss_pred EecCCCCeEEEEEccCCeEEE
Q psy11539 320 VNDVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~swR 340 (530)
++=+.+..|.+||+.+++.-+
T Consensus 166 ~sgs~D~~i~iwd~~~~~~~~ 186 (410)
T 1vyh_C 166 ASCSADMTIKLWDFQGFECIR 186 (410)
T ss_dssp EEEETTSCCCEEETTSSCEEE
T ss_pred EEEeCCCeEEEEeCCCCceeE
Confidence 444456789999998876544
No 212
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=88.44 E-value=19 Score=34.87 Aligned_cols=84 Identities=12% Similarity=0.067 Sum_probs=48.2
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEee----------
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVV---------- 310 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~---------- 310 (530)
.|..+....++++.+. |..+ -.|.+||+++++.++.+...... ...+..+.+-..
T Consensus 183 ~v~~~~~~~~~~~l~s--~~~d----------~~v~iwd~~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~ 247 (420)
T 3vl1_A 183 TVTDIAIIDRGRNVLS--ASLD----------GTIRLWECGTGTTIHTFNRKENP---HDGVNSIALFVGTDRQLHEIST 247 (420)
T ss_dssp CEEEEEEETTTTEEEE--EETT----------SCEEEEETTTTEEEEEECBTTBT---TCCEEEEEEEECCCSSCGGGCC
T ss_pred cEEEEEEcCCCCEEEE--EcCC----------CcEEEeECCCCceeEEeecCCCC---CCCccEEEEecCCcceeeeccc
Confidence 4666777777765542 2211 24999999999999888764321 122223332110
Q ss_pred ----c---CCCCeEEEEecCCCCeEEEEEccCCeEEE
Q psy11539 311 ----E---DCDHVFAYVNDVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 311 ----~---~c~~~~AYItDsg~~gLIVyDl~~g~swR 340 (530)
. ..++.+++... ..+.|.+||+++++.-.
T Consensus 248 ~~v~~~~~s~~~~~l~~~~-~dg~i~i~d~~~~~~~~ 283 (420)
T 3vl1_A 248 SKKNNLEFGTYGKYVIAGH-VSGVITVHNVFSKEQTI 283 (420)
T ss_dssp CCCCTTCSSCTTEEEEEEE-TTSCEEEEETTTCCEEE
T ss_pred CcccceEEcCCCCEEEEEc-CCCeEEEEECCCCceeE
Confidence 0 12344555544 34579999999886443
No 213
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=88.35 E-value=13 Score=34.77 Aligned_cols=29 Identities=0% Similarity=-0.015 Sum_probs=22.3
Q ss_pred CCcceEEcC---CCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINS---NGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~---~G~LYft~~~~~aI~cWnt~ 486 (530)
....++++. +|.++++-...+.|..||..
T Consensus 211 ~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~ 242 (357)
T 3i2n_A 211 GVCSLEFDRKDISMNKLVATSLEGKFHVFDMR 242 (357)
T ss_dssp CEEEEEESCSSSSCCEEEEEESTTEEEEEEEE
T ss_pred ceEEEEcCCCCCCCCEEEEECCCCeEEEEeCc
Confidence 355667776 77777777788899999987
No 214
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=88.17 E-value=33 Score=37.36 Aligned_cols=68 Identities=12% Similarity=-0.068 Sum_probs=40.5
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccc-cceEEEeecCCCC---eEEEEecCCCCeEEEEEccCCeE-EEEc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLF-SNIVTEVVEDCDH---VFAYVNDVFRYGLIVYDFFKNTS-YRLT 342 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~l-ndIvVDv~~~c~~---~~AYItDsg~~gLIVyDl~~g~s-wRv~ 342 (530)
-.|+++|++||+++-+|.......-.-... .-+.+|... .++ ..+|..+ ..+-|+++|.++|+. |++.
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~-~~G~~~~~v~~~~-~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKD-KDGKARKLLTHPD-RNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEC-TTSCEEEEEEEEC-TTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEEEeccc-cCCcEEEEEEEEC-CCcEEEEEECCCCCEeeccc
Confidence 579999999999999998854321111111 224455421 012 2344444 345799999988875 5543
No 215
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=87.96 E-value=18 Score=34.12 Aligned_cols=77 Identities=5% Similarity=0.062 Sum_probs=47.9
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+.+.+++.+-+. |.. .-.|.+||+.+++.++.+..... ....+.+. .++.++.
T Consensus 15 ~V~~~~fsp~~~~l~s--~~~----------dg~v~lWd~~~~~~~~~~~~~~~------~v~~~~~~----~~~~~l~- 71 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLT--TLY----------SGRVELWNYETQVEVRSIQVTET------PVRAGKFI----ARKNWII- 71 (304)
T ss_dssp CEEEEEECSSSSEEEE--EET----------TSEEEEEETTTTEEEEEEECCSS------CEEEEEEE----GGGTEEE-
T ss_pred ceEEEEECCCCCEEEE--EcC----------CCcEEEEECCCCceeEEeeccCC------cEEEEEEe----CCCCEEE-
Confidence 4667777777765442 221 14599999999999988876432 23344443 1233333
Q ss_pred ecCCCCeEEEEEccCCeEEE
Q psy11539 321 NDVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swR 340 (530)
+=+.+..|.+||+.+++.-+
T Consensus 72 s~s~d~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 72 VGSDDFRIRVFNYNTGEKVV 91 (304)
T ss_dssp EEETTSEEEEEETTTCCEEE
T ss_pred EECCCCEEEEEECCCCcEEE
Confidence 33345789999999886544
No 216
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=87.76 E-value=22 Score=34.85 Aligned_cols=29 Identities=7% Similarity=0.168 Sum_probs=22.6
Q ss_pred CCcceEEcCCCcEEEE--ccCCCeEEEEeCC
Q psy11539 458 QASASAINSNGVMFYN--LVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G~LYft--~~~~~aI~cWnt~ 486 (530)
+...+++..+|..+++ ....+.|..|+..
T Consensus 305 ~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 305 QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp CEEEEEECSSSSEEEEEECTTTCEEEEEEEE
T ss_pred cEEEEEECCCCCeEEEEeecCCCcEEEEecC
Confidence 4566788888887777 3378899999987
No 217
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=87.72 E-value=11 Score=37.80 Aligned_cols=61 Identities=11% Similarity=0.025 Sum_probs=36.5
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.|.+||+.+++....+.+... ...+..|.+.. .++...++=+.+..|.+||++++....+.
T Consensus 143 ~i~lWd~~~~~~~~~~~~~gH----~~~V~~l~f~p----~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 203 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIGA----GGSITGLKFNP----LNTNQFYASSMEGTTRLQDFKGNILRVFA 203 (435)
T ss_dssp CEEEECSSCCSCCEEECCCSS----SCCCCEEEECS----SCTTEEEEECSSSCEEEEETTSCEEEEEE
T ss_pred EEEEEECCCCCceeEEEccCC----CCCEEEEEEeC----CCCCEEEEEeCCCEEEEeeccCCceeEEe
Confidence 388899988765555554221 23456677641 22333344455678999999887554443
No 218
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=87.61 E-value=2.9 Score=40.91 Aligned_cols=74 Identities=8% Similarity=0.108 Sum_probs=50.9
Q ss_pred CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccc----cCccccceEEEeecCCCCeEEEEecCCC
Q psy11539 250 CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVF----EGSLFSNIVTEVVEDCDHVFAYVNDVFR 325 (530)
Q Consensus 250 cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~----~~S~lndIvVDv~~~c~~~~AYItDsg~ 325 (530)
.++||+.+.. -+|++||++|++++-++.++..... .......++++ ++.+|+... .
T Consensus 53 ~~~v~~~~~~-------------g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~v~~~-~ 112 (376)
T 3q7m_A 53 DNVVYAADRA-------------GLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVS------GGHVYIGSE-K 112 (376)
T ss_dssp TTEEEEECTT-------------SEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEE------TTEEEEEET-T
T ss_pred CCEEEEEcCC-------------CeEEEEEccCCceeeeecCccccccccccCcccccCceEe------CCEEEEEcC-C
Confidence 6889988642 2599999999999999998653210 11122344554 678999864 3
Q ss_pred CeEEEEEccCCe-EEEEcC
Q psy11539 326 YGLIVYDFFKNT-SYRLTH 343 (530)
Q Consensus 326 ~gLIVyDl~~g~-swRv~h 343 (530)
..|+.+|.++|+ .|+...
T Consensus 113 g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 113 AQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp SEEEEEETTTCCEEEEEEC
T ss_pred CEEEEEECCCCCEEEEEeC
Confidence 589999999776 588764
No 219
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=87.60 E-value=11 Score=35.12 Aligned_cols=29 Identities=14% Similarity=0.449 Sum_probs=23.2
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
....++++.+|.++++....+.|..||..
T Consensus 253 ~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 253 PVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred eEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 45567788888877777778899999998
No 220
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=87.36 E-value=21 Score=34.16 Aligned_cols=55 Identities=13% Similarity=-0.019 Sum_probs=35.2
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeE
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~s 338 (530)
.|.+||+.+++.++.+.... ...+..+++. .++.++... +..+.|.+||+++++.
T Consensus 150 ~i~~wd~~~~~~~~~~~~~~-----~~~i~~~~~~----pdg~~lasg-~~dg~i~iwd~~~~~~ 204 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAKS-----DVEYSSGVLH----KDSLLLALY-SPDGILDVYNLSSPDQ 204 (343)
T ss_dssp CEEEEESSSSCEEEEECCCS-----SCCCCEEEEC----TTSCEEEEE-CTTSCEEEEESSCTTS
T ss_pred cEEEEECCCCcEEEEEecCC-----CCceEEEEEC----CCCCEEEEE-cCCCEEEEEECCCCCC
Confidence 48999999999876554322 2235666665 233344333 3456899999998853
No 221
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=86.83 E-value=13 Score=36.25 Aligned_cols=82 Identities=6% Similarity=0.061 Sum_probs=40.2
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+....+++|.+.-. + -.|.+||+.+++.+....+.. ..-...+..|++. .++.++..
T Consensus 96 ~V~~~~~s~d~~~l~~s~---d----------g~v~lWd~~~~~~~~~~~~~~--~~h~~~V~~v~~s----pdg~~l~s 156 (357)
T 4g56_B 96 GVTDVAWVSEKGILVASD---S----------GAVELWEILEKESLLVNKFAK--YEHDDIVKTLSVF----SDGTQAVS 156 (357)
T ss_dssp CEEEEEEETTTEEEEEET---T----------SCEEEC--------CCCCEEE--CCCSSCEEEEEEC----SSSSEEEE
T ss_pred CEEEEEEcCCCCEEEEEC---C----------CEEEEeeccccceeEEEeecc--CCCCCCEEEEEEC----CCCCEEEE
Confidence 367778888888765311 1 138899999886543222210 0012334555554 23444443
Q ss_pred ecCCCCeEEEEEccCCeEEEEc
Q psy11539 321 NDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swRv~ 342 (530)
. +....|.+||+.+++..+..
T Consensus 157 g-s~dg~v~iwd~~~~~~~~~~ 177 (357)
T 4g56_B 157 G-GKDFSVKVWDLSQKAVLKSY 177 (357)
T ss_dssp E-ETTSCEEEEETTTTEEEEEE
T ss_pred E-eCCCeEEEEECCCCcEEEEE
Confidence 3 34567999999998765543
No 222
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=86.77 E-value=22 Score=33.84 Aligned_cols=78 Identities=8% Similarity=0.037 Sum_probs=47.3
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+.+..+|++-+. |.. --.|.+||+.+++.++++.-.. ..+..+.+. .++...+
T Consensus 67 ~v~~~~~s~dg~~l~s--~s~----------D~~v~~wd~~~~~~~~~~~~h~------~~v~~~~~~-----~~~~~l~ 123 (319)
T 3frx_A 67 IVQDCTLTADGAYALS--ASW----------DKTLRLWDVATGETYQRFVGHK------SDVMSVDID-----KKASMII 123 (319)
T ss_dssp CEEEEEECTTSSEEEE--EET----------TSEEEEEETTTTEEEEEEECCS------SCEEEEEEC-----TTSCEEE
T ss_pred cEEEEEECCCCCEEEE--EeC----------CCEEEEEECCCCCeeEEEccCC------CcEEEEEEc-----CCCCEEE
Confidence 3555666666665442 211 2459999999999988775422 234555554 2333444
Q ss_pred ecCCCCeEEEEEccCCeEEEE
Q psy11539 321 NDVFRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~swRv 341 (530)
+=+.+..|.+||++......+
T Consensus 124 s~s~D~~i~vwd~~~~~~~~~ 144 (319)
T 3frx_A 124 SGSRDKTIKVWTIKGQCLATL 144 (319)
T ss_dssp EEETTSCEEEEETTSCEEEEE
T ss_pred EEeCCCeEEEEECCCCeEEEE
Confidence 545567899999986644443
No 223
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=86.75 E-value=25 Score=34.41 Aligned_cols=29 Identities=7% Similarity=0.102 Sum_probs=25.1
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
.-..+++..+|.++++-...+.|..||..
T Consensus 251 ~v~~v~~~p~~~~l~s~s~D~~i~lwd~~ 279 (380)
T 3iz6_a 251 DINSVKFFPDGQRFGTGSDDGTCRLFDMR 279 (380)
T ss_dssp CCCEEEECTTSSEEEEECSSSCEEEEETT
T ss_pred CeEEEEEecCCCeEEEEcCCCeEEEEECC
Confidence 45667888899999999899999999998
No 224
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=86.35 E-value=6.6 Score=37.80 Aligned_cols=65 Identities=17% Similarity=0.013 Sum_probs=35.5
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe-EEEEe-c------CCCCeEEEEEccCCeEEEEcC
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV-FAYVN-D------VFRYGLIVYDFFKNTSYRLTH 343 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~-~AYIt-D------sg~~gLIVyDl~~g~swRv~h 343 (530)
.|++||+++++......++... ........+++.. ++. .+|.. | .+...|.++|+.+++..++..
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~~~-~~~~~~~~~~~sp----dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~ 337 (388)
T 3pe7_A 265 FIYSADPETLENRQLTSMPACS-HLMSNYDGSLMVG----DGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVAR 337 (388)
T ss_dssp EEEEECTTTCCEEEEEEECCEE-EEEECTTSSEEEE----EECCC------------CCCCEEEEEETTTTEEEEEEE
T ss_pred eEEEEecCCCceEEEEcCCCce-eeeecCCCCeEcc----CCCcceeEeeeccccccCCCCEEEEEeccCCceEEecc
Confidence 4999999999876555554310 0001112223321 222 33322 2 456789999999998877764
No 225
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=86.26 E-value=19 Score=35.06 Aligned_cols=58 Identities=14% Similarity=0.159 Sum_probs=37.5
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEE
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv 341 (530)
-+|.+||+++++.++.+.-.. .....+++. .++...++=+.+..|.+||+++++...+
T Consensus 220 g~v~~wd~~~~~~~~~~~~h~------~~v~~v~~~-----p~~~~l~s~s~D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 220 KKAMVWDMRSGQCVQAFETHE------SDVNSVRYY-----PSGDAFASGSDDATCRLYDLRADREVAI 277 (354)
T ss_dssp SCEEEEETTTCCEEEEECCCS------SCEEEEEEC-----TTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCcEEEEecCCC------CCeEEEEEe-----CCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 458999999999888764422 334556664 2233334444566899999998865443
No 226
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=86.26 E-value=24 Score=33.67 Aligned_cols=62 Identities=6% Similarity=-0.018 Sum_probs=38.0
Q ss_pred CCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCC----CeEEEEEccCCeEEEE
Q psy11539 271 CPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR----YGLIVYDFFKNTSYRL 341 (530)
Q Consensus 271 c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~----~gLIVyDl~~g~swRv 341 (530)
....|+++|+.++++.....- ...+..+++.. +.+...+|+++... ..|.++|+.+++..++
T Consensus 166 ~~~~l~~~d~~~g~~~~~~~~-------~~~~~~~~~sp--~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l 231 (396)
T 3c5m_A 166 PTCRLIKVDIETGELEVIHQD-------TAWLGHPIYRP--FDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKI 231 (396)
T ss_dssp CCEEEEEEETTTCCEEEEEEE-------SSCEEEEEEET--TEEEEEEEEECSCSSSCSCCCEEEETTSCCCEES
T ss_pred CcceEEEEECCCCcEEeeccC-------CcccccceECC--CCCCEEEEEecCCCCCCCceEEEEECCCCceeEe
Confidence 345799999999887654421 22344555541 01234788887443 5799999987754443
No 227
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=86.25 E-value=40 Score=36.29 Aligned_cols=69 Identities=9% Similarity=-0.095 Sum_probs=40.6
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCcc-ccceEEEeecCCCC--eEEEEecCCCCeEEEEEccCCeE-EEEc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSL-FSNIVTEVVEDCDH--VFAYVNDVFRYGLIVYDFFKNTS-YRLT 342 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~-lndIvVDv~~~c~~--~~AYItDsg~~gLIVyDl~~g~s-wRv~ 342 (530)
-.|+++|++||+++-+|.+.....-.-.. ..-+.+|......+ ..+|..+ ..+-|+++|.++|+. |++.
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~-~~G~l~~lD~~tG~~lw~~~ 363 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHAD-RNGFFYVVDRSNGKLQNAFP 363 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEEC-TTSEEEEEETTTCCEEEEEE
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEEC-CCceEEEEECCCCCEecccc
Confidence 57999999999999999884321111111 12344553200011 3555554 345788899888874 5554
No 228
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=86.15 E-value=19 Score=35.23 Aligned_cols=29 Identities=7% Similarity=0.179 Sum_probs=23.1
Q ss_pred CCcceEEcCCC-cEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNG-VMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G-~LYft~~~~~aI~cWnt~ 486 (530)
.-..+++..+| .++++....+.|..||..
T Consensus 133 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 162 (402)
T 2aq5_A 133 RVGIVAWHPTAQNVLLSAGCDNVILVWDVG 162 (402)
T ss_dssp CEEEEEECSSBTTEEEEEETTSCEEEEETT
T ss_pred eEEEEEECcCCCCEEEEEcCCCEEEEEECC
Confidence 45667788777 688887778899999987
No 229
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=86.02 E-value=25 Score=33.83 Aligned_cols=28 Identities=14% Similarity=0.272 Sum_probs=23.1
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeC
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNT 485 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt 485 (530)
.-..++++.+|.++++-.....|..|+.
T Consensus 196 ~v~~l~~sp~g~~l~s~s~D~~v~iW~~ 223 (345)
T 3fm0_A 196 TVWSLAFDPSGQRLASCSDDRTVRIWRQ 223 (345)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCCCeEEEecc
Confidence 3556788888988888888889999985
No 230
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=85.56 E-value=27 Score=33.80 Aligned_cols=116 Identities=10% Similarity=0.127 Sum_probs=72.0
Q ss_pred eeEEeCCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCC------C-CCCceEEEEEEEeCCCcEEEEe
Q psy11539 185 GIGIWRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDS------N-CNSLISVFRMSVDKCDRLWIMD 257 (530)
Q Consensus 185 GV~v~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~------n-c~~LvSV~rv~ID~cgRLWVLD 257 (530)
...+.+++||++... | .|..++..++. .+ |+..... . +..+. -.+.+ ..++|||..
T Consensus 48 ~p~v~~~~v~~~~~~---g---~v~a~d~~tG~---~~-----W~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~v~v~~ 110 (376)
T 3q7m_A 48 HPALADNVVYAADRA---G---LVKALNADDGK---EI-----WSVSLAEKDGWFSKEPALLS--GGVTV-SGGHVYIGS 110 (376)
T ss_dssp CCEEETTEEEEECTT---S---EEEEEETTTCC---EE-----EEEECCC---CCSCCCCCEE--EEEEE-ETTEEEEEE
T ss_pred ccEEECCEEEEEcCC---C---eEEEEEccCCc---ee-----eeecCccccccccccCcccc--cCceE-eCCEEEEEc
Confidence 445679999999632 2 67778765332 11 2221110 0 11221 22333 468999975
Q ss_pred CCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCe
Q psy11539 258 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT 337 (530)
Q Consensus 258 tG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~ 337 (530)
.. -.|++||++||+++-++.++..+ ....+++ ++.+|+... ...|+.+|.++|+
T Consensus 111 ~~-------------g~l~a~d~~tG~~~W~~~~~~~~------~~~p~~~------~~~v~v~~~-~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 111 EK-------------AQVYALNTSDGTVAWQTKVAGEA------LSRPVVS------DGLVLIHTS-NGQLQALNEADGA 164 (376)
T ss_dssp TT-------------SEEEEEETTTCCEEEEEECSSCC------CSCCEEE------TTEEEEECT-TSEEEEEETTTCC
T ss_pred CC-------------CEEEEEECCCCCEEEEEeCCCce------EcCCEEE------CCEEEEEcC-CCeEEEEECCCCc
Confidence 42 25999999999999999886542 2334454 468888653 4589999998886
Q ss_pred -EEEEcC
Q psy11539 338 -SYRLTH 343 (530)
Q Consensus 338 -swRv~h 343 (530)
.|+...
T Consensus 165 ~~W~~~~ 171 (376)
T 3q7m_A 165 VKWTVNL 171 (376)
T ss_dssp EEEEEEC
T ss_pred EEEEEeC
Confidence 587654
No 231
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=85.44 E-value=20 Score=32.84 Aligned_cols=60 Identities=7% Similarity=0.138 Sum_probs=41.1
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.|.+||+.|+++++.+.+... ......+++. .++.++. +=+.+..|.+||+++++.-+..
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~----~~~V~~v~~~----~~~~~l~-sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQP----GEYISSVAWI----KEGNYLA-VGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp EEEEEETTTCCEEEEEECCST----TCCEEEEEEC----TTSSEEE-EEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEEecCC----CCeEEEEEEC----CCCCEEE-EEECCCcEEEeecCCceeEEEe
Confidence 499999999999998887432 2334556664 2334443 3345568999999999776543
No 232
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=85.37 E-value=10 Score=43.23 Aligned_cols=29 Identities=17% Similarity=0.326 Sum_probs=23.7
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
....+++..+|.++++....+.|..||..
T Consensus 1087 ~v~~~~~s~d~~~l~s~s~d~~v~iwd~~ 1115 (1249)
T 3sfz_A 1087 TVLSCAISSDATKFSSTSADKTAKIWSFD 1115 (1249)
T ss_dssp CCCCEEECSSSSSCEEECCSSCCCEECSS
T ss_pred cEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 45677888888888888888899999987
No 233
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=84.55 E-value=27 Score=32.87 Aligned_cols=54 Identities=11% Similarity=0.182 Sum_probs=36.2
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCe
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT 337 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~ 337 (530)
-.|.+||+.+++.++.+.-.. ..+..|++. .++.++ ++=+.+..|.+||++++.
T Consensus 77 ~~i~vwd~~~~~~~~~~~~h~------~~v~~~~~~----~~~~~l-~sgs~D~~v~lWd~~~~~ 130 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFEAHP------DYIRSIAVH----PTKPYV-LSGSDDLTVKLWNWENNW 130 (304)
T ss_dssp SEEEEEETTTCCEEEEEECCS------SCEEEEEEC----SSSSEE-EEEETTSCEEEEEGGGTT
T ss_pred CEEEEEECCCCcEEEEEeCCC------CcEEEEEEc----CCCCEE-EEECCCCeEEEEECCCCc
Confidence 459999999999988776432 234566665 233343 344456789999998773
No 234
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=84.40 E-value=47 Score=35.53 Aligned_cols=67 Identities=12% Similarity=-0.072 Sum_probs=40.4
Q ss_pred CEEEEEECCCCcEEEEEECCCccccc-CccccceEEEeecCCCCe--E-EEEecCCCCeEEEEEccCCeE-EEEc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFE-GSLFSNIVTEVVEDCDHV--F-AYVNDVFRYGLIVYDFFKNTS-YRLT 342 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~-~S~lndIvVDv~~~c~~~--~-AYItDsg~~gLIVyDl~~g~s-wRv~ 342 (530)
-.|+++|++||+++-+|......... ...-.-+.+|... ++. . +|+.+ ..+.|+++|.++|+. |++.
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~--~G~~~~~v~~~~-~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPV--NGKMTPLLSHID-RNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEE--TTEEEEEEEEEC-TTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEeccc--CCcEEEEEEEeC-CCcEEEEEECCCCCEEeeec
Confidence 46999999999999999885321111 1111223444211 122 3 44454 445799999999875 7664
No 235
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=84.24 E-value=33 Score=36.22 Aligned_cols=63 Identities=11% Similarity=-0.008 Sum_probs=35.2
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC-------CCeEEEEEccCCeEEEEc
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-------RYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg-------~~gLIVyDl~~g~swRv~ 342 (530)
.|.+||+++++..+.+.-... .......+++. ++ +...||.++.. ...|.+||+.+++..++.
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~---~~~~v~~~~~S--pD-g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 107 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKI---ESLRAIRYEIS--PD-REYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLD 107 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTT---TTTTCSEEEEC--TT-SSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECC
T ss_pred CEEEEECCCCcEEEEeccccc---cccccceEEEC--CC-CCEEEEEecCccceeecceeeEEEEECCCCceEecc
Confidence 477788878776654433111 00123445553 21 23456665532 268999999999764443
No 236
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=84.10 E-value=35 Score=33.74 Aligned_cols=57 Identities=11% Similarity=-0.009 Sum_probs=37.6
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.|.+||+++++.++++.-. ...+..+.+. .++.+..+ +.++.|.|||+.+++.-+..
T Consensus 143 ~i~vwd~~~~~~~~~~~~h------~~~V~~l~~~-----~~~~l~s~-s~dg~i~vwd~~~~~~~~~~ 199 (464)
T 3v7d_B 143 MIRVYDSINKKFLLQLSGH------DGGVWALKYA-----HGGILVSG-STDRTVRVWDIKKGCCTHVF 199 (464)
T ss_dssp CEEEEETTTTEEEEEECCC------SSCEEEEEEC-----STTEEEEE-ETTSCEEEEETTTTEEEEEE
T ss_pred cEEEEECCCCcEEEEEeCC------CcCEEEEEEc-----CCCEEEEE-eCCCCEEEEECCCCcEEEEE
Confidence 3999999999988876532 2334555553 33444433 44578999999999765544
No 237
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=84.10 E-value=15 Score=36.72 Aligned_cols=28 Identities=11% Similarity=0.285 Sum_probs=22.6
Q ss_pred CcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 459 ASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 459 s~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
-..++++.+|..+++-...+.|..||..
T Consensus 299 v~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 299 VNAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp EEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred ccceeECCCCCeeEEEcCCCEEEEEECC
Confidence 3456677888888888888899999987
No 238
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=83.78 E-value=49 Score=35.24 Aligned_cols=58 Identities=19% Similarity=0.305 Sum_probs=33.4
Q ss_pred CEEEEEECCCCc-----EEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEE
Q psy11539 273 PKIMVFDLKTNT-----LIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 273 PKLvvfDL~Td~-----li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv 341 (530)
-.|.+||+.++. ..+++.-. .....++++. .++.++ ++=+.+..|.|||+.+++.-+.
T Consensus 405 ~~i~~W~~~~~~~~~~~~~~~~~~h------~~~v~~v~~s----~~g~~l-~sgs~Dg~v~vwd~~~~~~~~~ 467 (694)
T 3dm0_A 405 KSIILWKLTKDDKAYGVAQRRLTGH------SHFVEDVVLS----SDGQFA-LSGSWDGELRLWDLAAGVSTRR 467 (694)
T ss_dssp SEEEEEECCCSTTCSCEEEEEEECC------SSCEEEEEEC----TTSSEE-EEEETTSEEEEEETTTTEEEEE
T ss_pred CcEEEEEccCCCcccccccceecCC------CCcEEEEEEC----CCCCEE-EEEeCCCcEEEEECCCCcceeE
Confidence 468899987642 22322221 2334555554 234444 3444567899999999876554
No 239
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=83.59 E-value=1.2 Score=49.25 Aligned_cols=118 Identities=9% Similarity=0.053 Sum_probs=69.5
Q ss_pred CCceEEEEEEEeC-CCcEEEEeCCCCCcc--c------Cc-cccCCCEEEEEECCCCc---E---EEEEEC---CCcc--
Q psy11539 237 NSLISVFRMSVDK-CDRLWIMDTGVTNIL--S------SI-QQLCPPKIMVFDLKTNT---L---IRKYIL---PTAQ-- 295 (530)
Q Consensus 237 ~~LvSV~rv~ID~-cgRLWVLDtG~~~~~--~------~~-~~~c~PKLvvfDL~Td~---l---i~~y~~---P~~v-- 295 (530)
..+-.+-+|.++. .+.++|.=|...... + ++ ....--.|+.|.+..+. . ...+.+ |...
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 4567788889986 678888755432110 0 01 11233568888775431 1 122222 1100
Q ss_pred -----------cccCccccceEEEeecCCCCeEEEE-ecCC-----------CCeEEEEEccCCeEEEEcCCCCCcCCCc
Q psy11539 296 -----------VFEGSLFSNIVTEVVEDCDHVFAYV-NDVF-----------RYGLIVYDFFKNTSYRLTHPYMYPEPTQ 352 (530)
Q Consensus 296 -----------~~~~S~lndIvVDv~~~c~~~~AYI-tDsg-----------~~gLIVyDl~~g~swRv~h~sf~pdP~~ 352 (530)
.+.-+..++|+|| .++.+|| ||.. ..++++++..+|+..|+... |..
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd-----~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~-----P~~ 530 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFD-----KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-----PIG 530 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEEC-----TTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEEC-----CTT
T ss_pred ccccCccCccccCccCCCCceEEC-----CCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeC-----CCC
Confidence 0112456789999 6789999 9974 23788888888888877632 110
Q ss_pred ceeeecCeEeeecCCccceecCCCc
Q psy11539 353 STYILDNLKFRWVDGIFGMAISPEL 377 (530)
Q Consensus 353 ~~f~I~G~~f~~~dGi~GIALsp~~ 377 (530)
. -+.||++||++
T Consensus 531 a-------------EpnGiafSPD~ 542 (592)
T 4a9v_A 531 C-------------EVTGISFSPDQ 542 (592)
T ss_dssp C-------------EEEEEEECTTS
T ss_pred c-------------cccCCEECCCC
Confidence 0 13699999986
No 240
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.19 E-value=4.4 Score=39.88 Aligned_cols=71 Identities=11% Similarity=-0.016 Sum_probs=43.7
Q ss_pred eEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCC-C--ccccCceeEEeecCCceeecceeEEecCCcEEEEE
Q psy11539 447 FHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKT-K--VYLPQTQDIVQTSRDILNFREEGEEEEEKENTCTF 523 (530)
Q Consensus 447 v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~-~--~~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~ 523 (530)
-+.+|+.|-+ .=..+.+|.+|+||.+ ....|+++++-+ + .+... -.+|.+ ..=-.| .-|.++.+|.||.+.
T Consensus 79 ~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~-a~~vg~-~gw~~~-~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 79 AKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIAR-ATEVGS-GGWSGF-KFLFFHPNGYLYAVH 152 (236)
T ss_dssp CEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHH-SEEEEC-SSGGGE-EEEEECTTSCEEEEE
T ss_pred ccEecccccc-cceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceecc-ccEecc-CCCCce-EEEEECCCceEEEEe
Confidence 4566665532 3678899999999999 558999998731 1 01100 112221 000122 567889999999876
No 241
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.90 E-value=23 Score=37.37 Aligned_cols=72 Identities=8% Similarity=-0.028 Sum_probs=41.2
Q ss_pred CceEEEEEEEeCCC--cEEEEeCCCCCcccCccccCCCEEEEEECCCCcE-EEEEECCCccccc-----CccccceEEEe
Q psy11539 238 SLISVFRMSVDKCD--RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTL-IRKYILPTAQVFE-----GSLFSNIVTEV 309 (530)
Q Consensus 238 ~LvSV~rv~ID~cg--RLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~l-i~~y~~P~~v~~~-----~S~lndIvVDv 309 (530)
+|..+-.|.++++| ||||.... -+|.++|...... .....++..++.. ...|-+|+++.
T Consensus 12 gL~~P~~~a~~pdG~~rl~V~er~-------------G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P 78 (463)
T 2wg3_C 12 GLRQPVGALHSGDGSQRLFILEKE-------------GYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHP 78 (463)
T ss_dssp EESSEEEEECCSSSSCCEEEEETT-------------TEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECT
T ss_pred CCCCceEEEECCCCCeEEEEEeCC-------------ceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCC
Confidence 46777888888776 69998753 2477887543211 0113565443321 35677899972
Q ss_pred ecCCCCeEEEEecC
Q psy11539 310 VEDCDHVFAYVNDV 323 (530)
Q Consensus 310 ~~~c~~~~AYItDs 323 (530)
.-. .++++|++-+
T Consensus 79 ~f~-~n~~lYv~yt 91 (463)
T 2wg3_C 79 NYK-KNGKLYVSYT 91 (463)
T ss_dssp THH-HHCEEEEEEE
T ss_pred CCc-CCCEEEEEEe
Confidence 100 1367777643
No 242
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=82.82 E-value=15 Score=34.26 Aligned_cols=29 Identities=10% Similarity=0.355 Sum_probs=23.5
Q ss_pred CCcceEEcC-CCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINS-NGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~-~G~LYft~~~~~aI~cWnt~ 486 (530)
.-..+.+.. +|.++++-...+.|..||..
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 456677776 88888888888899999987
No 243
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=82.29 E-value=27 Score=33.40 Aligned_cols=35 Identities=20% Similarity=0.466 Sum_probs=21.7
Q ss_pred cccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEE
Q psy11539 301 LFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 301 ~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swR 340 (530)
....+++. .++.++ ++=+.+..|.+||+++++..+
T Consensus 78 ~V~~~~~~----~~~~~l-~s~s~D~~v~lwd~~~~~~~~ 112 (343)
T 2xzm_R 78 FVSDLALS----QENCFA-ISSSWDKTLRLWDLRTGTTYK 112 (343)
T ss_dssp CEEEEEEC----SSTTEE-EEEETTSEEEEEETTSSCEEE
T ss_pred ceEEEEEC----CCCCEE-EEEcCCCcEEEEECCCCcEEE
Confidence 34555554 133343 444556789999999986654
No 244
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=82.29 E-value=41 Score=36.71 Aligned_cols=20 Identities=15% Similarity=0.200 Sum_probs=16.2
Q ss_pred CCcEEEEccCCCeEEEEeCC
Q psy11539 467 NGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 467 ~G~LYft~~~~~aI~cWnt~ 486 (530)
+|.++++....+.|..||..
T Consensus 169 d~~~l~sgs~dg~I~iwd~~ 188 (753)
T 3jro_A 169 ESRKFVTGGADNLVKIWKYN 188 (753)
T ss_dssp GGCCEEEEETTSCEEEEEEE
T ss_pred CCCEEEEEECCCeEEEEecc
Confidence 57777777778889999986
No 245
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=82.23 E-value=31 Score=37.68 Aligned_cols=29 Identities=7% Similarity=0.115 Sum_probs=23.8
Q ss_pred CCcceEEcCC---CcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSN---GVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~---G~LYft~~~~~aI~cWnt~ 486 (530)
.-.++++..+ |.++++....+.|.+||..
T Consensus 206 ~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 206 WVRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp CEEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred cEEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 4566777777 8888888888999999988
No 246
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=81.71 E-value=23 Score=33.41 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=24.2
Q ss_pred ccccceEEEeecCCCCeEEEEecC-------CCCeEEEEEccCCeEEEE
Q psy11539 300 SLFSNIVTEVVEDCDHVFAYVNDV-------FRYGLIVYDFFKNTSYRL 341 (530)
Q Consensus 300 S~lndIvVDv~~~c~~~~AYItDs-------g~~gLIVyDl~~g~swRv 341 (530)
.++.++++| +...||+... ....|.++|+.+++..++
T Consensus 15 ~~~~~~~~d-----G~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l 58 (347)
T 2gop_A 15 AYLSDPRTK-----GELVAYVLTKANLKDNKYENTIVIENLKNNARRFI 58 (347)
T ss_dssp CEEEEEEEE-----TTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE
T ss_pred EEcccceEC-----CcEEEEEEeecCcccCCccceEEEEeCCCCceEEc
Confidence 445666665 5677787532 245788999988865544
No 247
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=80.98 E-value=51 Score=33.44 Aligned_cols=55 Identities=11% Similarity=0.082 Sum_probs=37.1
Q ss_pred CCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeE
Q psy11539 271 CPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 271 c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~s 338 (530)
+..++.+|++.+++.++.+..... ...+++. +.++.+.......|.+||+.+++.
T Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~------~~~l~~~~~~d~~i~~~~~~~~~~ 479 (615)
T 1pgu_A 425 NDDDLLILQSFTGDIIKSVRLNSP-------GSAVSLS------QNYVAVGLEEGNTIQVFKLSDLEV 479 (615)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSC-------EEEEEEC------SSEEEEEETTTSCEEEEETTEEEE
T ss_pred CCCceEEEeccCCceeeecccCCC-------ceEEEEc------CCEEEEeecCCCeEEEEECCCccc
Confidence 456688899988888887765322 3444443 446666654356899999998754
No 248
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=80.86 E-value=36 Score=31.62 Aligned_cols=77 Identities=9% Similarity=0.068 Sum_probs=45.2
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCc----EEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNT----LIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~----li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
.|..+....++.+.+.=.+ .-.|.+||+.+++ +...+.. ...+..+++. .++.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~------------d~~v~iw~~~~~~~~~~~~~~~~~-------~~~v~~~~~~----~~~~ 69 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSW------------DGSLTVYKFDIQAKNVDLLQSLRY-------KHPLLCCNFI----DNTD 69 (342)
T ss_dssp CEEEEEEEGGGTEEEEEET------------TSEEEEEEEETTTTEEEEEEEEEC-------SSCEEEEEEE----ESSS
T ss_pred cEEEEEEcCCCCEEEEEcC------------CCeEEEEEeCCCCccccceeeeec-------CCceEEEEEC----CCCC
Confidence 4666677766654433111 1348899998877 4333221 2345666666 2455
Q ss_pred -EEEEecCCCCeEEEEEc-cCCeEEEE
Q psy11539 317 -FAYVNDVFRYGLIVYDF-FKNTSYRL 341 (530)
Q Consensus 317 -~AYItDsg~~gLIVyDl-~~g~swRv 341 (530)
+++.+. ..+.|.+||+ .+++...+
T Consensus 70 ~~l~~~~-~dg~i~~wd~~~~~~~~~~ 95 (342)
T 1yfq_A 70 LQIYVGT-VQGEILKVDLIGSPSFQAL 95 (342)
T ss_dssp EEEEEEE-TTSCEEEECSSSSSSEEEC
T ss_pred cEEEEEc-CCCeEEEEEeccCCceEec
Confidence 565555 3458999999 88866443
No 249
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.83 E-value=8.3 Score=40.81 Aligned_cols=29 Identities=14% Similarity=0.151 Sum_probs=23.4
Q ss_pred CcceEEcCCCcEEEEccC-----------------CCeEEEEeCCCC
Q psy11539 459 ASASAINSNGVMFYNLVT-----------------KHSVGCWNTKTK 488 (530)
Q Consensus 459 s~G~aiD~~G~LYft~~~-----------------~~aI~cWnt~~~ 488 (530)
...++++.+|.||++.-. ..+|.+.|++ +
T Consensus 141 g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~d-g 186 (463)
T 2wg3_C 141 GGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVD-T 186 (463)
T ss_dssp EEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCC-C
T ss_pred CCcEeECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECC-C
Confidence 567899999999998432 4679999998 5
No 250
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=80.78 E-value=67 Score=34.71 Aligned_cols=78 Identities=13% Similarity=0.107 Sum_probs=48.0
Q ss_pred CceEEEEEEEeCCCc--EEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEE-EeecCCC
Q psy11539 238 SLISVFRMSVDKCDR--LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVT-EVVEDCD 314 (530)
Q Consensus 238 ~LvSV~rv~ID~cgR--LWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvV-Dv~~~c~ 314 (530)
+..++-++.+-++|+ +|.+|.+-.+ ...|.++|++|++.+.. .++. .....++. | +
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~---------~~~i~v~dl~tg~~~~~-~~~~------~k~~~~~WsD-----g 185 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSD---------WREIHLMDVESKQPLET-PLKD------VKFSGISWLG-----N 185 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCC---------EEEEEEEETTTCSEEEE-EEEE------EESCCCEEET-----T
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCc---------eEEEEEEECCCCCCCcc-ccCC------ceeccEEEeC-----C
Confidence 445788888888887 5677865432 14699999999987643 3321 10112222 4 6
Q ss_pred CeEEEEecCCC-----------CeEEEEEccCC
Q psy11539 315 HVFAYVNDVFR-----------YGLIVYDFFKN 336 (530)
Q Consensus 315 ~~~AYItDsg~-----------~gLIVyDl~~g 336 (530)
++++|.++-.. ..|.++++.++
T Consensus 186 ~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~ 218 (693)
T 3iuj_A 186 EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTA 218 (693)
T ss_dssp TEEEEEESSCCC-------CCCCEEEEEETTSC
T ss_pred CEEEEEEecCcccccccccCCCcEEEEEECCCC
Confidence 78888886532 34666666554
No 251
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=80.34 E-value=39 Score=35.60 Aligned_cols=69 Identities=9% Similarity=0.018 Sum_probs=39.9
Q ss_pred EEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecC
Q psy11539 244 RMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV 323 (530)
Q Consensus 244 rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs 323 (530)
.+..+++|++-+.=.| -.+.+||++++++++.+.-.. .....+++. .++.++-..+
T Consensus 23 ~~~~spdg~~l~~~~~-------------~~v~l~~~~~~~~~~~~~~h~------~~v~~~~~s----pdg~~lasg~- 78 (611)
T 1nr0_A 23 VLGNTPAGDKIQYCNG-------------TSVYTVPVGSLTDTEIYTEHS------HQTTVAKTS----PSGYYCASGD- 78 (611)
T ss_dssp CCEECTTSSEEEEEET-------------TEEEEEETTCSSCCEEECCCS------SCEEEEEEC----TTSSEEEEEE-
T ss_pred EEeeCCCCCEEEeCCC-------------CEEEEecCCCcccCeEecCCC------CceEEEEEC----CCCcEEEEEe-
Confidence 3456677765554222 148889998888777654322 223445554 2344443333
Q ss_pred CCCeEEEEEccCC
Q psy11539 324 FRYGLIVYDFFKN 336 (530)
Q Consensus 324 g~~gLIVyDl~~g 336 (530)
.+..|.+||+.++
T Consensus 79 ~d~~v~lWd~~~~ 91 (611)
T 1nr0_A 79 VHGNVRIWDTTQT 91 (611)
T ss_dssp TTSEEEEEESSST
T ss_pred CCCCEEEeECCCC
Confidence 3567999998755
No 252
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=79.03 E-value=30 Score=39.30 Aligned_cols=26 Identities=12% Similarity=0.276 Sum_probs=19.1
Q ss_pred CeEEEEecCCCCeEE-EEEccCCeEEEEc
Q psy11539 315 HVFAYVNDVFRYGLI-VYDFFKNTSYRLT 342 (530)
Q Consensus 315 ~~~AYItDsg~~gLI-VyDl~~g~swRv~ 342 (530)
..++|.+| ...|. +||..+++..++.
T Consensus 349 ~~l~~~s~--~~~l~~~~d~~~~~~~~l~ 375 (1045)
T 1k32_A 349 VAFIHGTR--EGDFLGIYDYRTGKAEKFE 375 (1045)
T ss_dssp EEEEEEET--TEEEEEEEETTTCCEEECC
T ss_pred CeEEEEEC--CCceEEEEECCCCCceEec
Confidence 46788888 56888 9999888655543
No 253
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=78.99 E-value=52 Score=32.41 Aligned_cols=60 Identities=8% Similarity=0.170 Sum_probs=42.0
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.|.+||+.|+++++.+.+... ......|++. .++.++.+. +.++.|.+||+.+++.-+..
T Consensus 126 tV~lWd~~tg~~~~~~~~~~~----~~~V~sv~fs----pdg~~lasg-s~Dg~v~iWd~~~~~~~~~~ 185 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQP----GEYISSVAWI----KEGNYLAVG-TSSAEVQLWDVQQQKRLRNM 185 (420)
T ss_dssp EEEEEETTTCCEEEEEECCST----TCCEEEEEEC----TTSSEEEEE-ETTSCEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEEecCC----CCcEEEEEEC----CCCCEEEEE-ECCCeEEEEEcCCCcEEEEE
Confidence 499999999999998887432 2345666664 234455444 34568999999999876654
No 254
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=78.30 E-value=42 Score=35.68 Aligned_cols=18 Identities=22% Similarity=0.224 Sum_probs=14.8
Q ss_pred CeEEEEEccCCeEEEEcC
Q psy11539 326 YGLIVYDFFKNTSYRLTH 343 (530)
Q Consensus 326 ~gLIVyDl~~g~swRv~h 343 (530)
..|.++|+.+++..++..
T Consensus 64 ~~i~~~d~~~g~~~~~~~ 81 (741)
T 2ecf_A 64 LDLWSYDIGSGQTRLLVD 81 (741)
T ss_dssp EEEEEEETTTCCEEEEEC
T ss_pred cEEEEEECCCCceeEccc
Confidence 379999999998877764
No 255
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=77.36 E-value=42 Score=35.48 Aligned_cols=65 Identities=11% Similarity=-0.024 Sum_probs=36.6
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE-EecCC--CCeEEEEEccCCeEEEEc
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY-VNDVF--RYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY-ItDsg--~~gLIVyDl~~g~swRv~ 342 (530)
+|.+||+.+++..+++..+.........+..+++- + ++.+++ .++.+ ...|.++|+.+++..++.
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~S--p--Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~ 296 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWA--T--STKVAVTWLNRAQNVSILTLCDATTGVCTKKH 296 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEES--S--SSEEEEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCceeEEeeCCccCCCccceeEEEEEe--C--CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEE
Confidence 79999999988655554433221112233333332 2 344443 33432 356889999998766654
No 256
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=77.31 E-value=55 Score=31.75 Aligned_cols=31 Identities=13% Similarity=0.190 Sum_probs=24.4
Q ss_pred CCcceEEcCCC-cEEEEccCCCeEEEEeCCCC
Q psy11539 458 QASASAINSNG-VMFYNLVTKHSVGCWNTKTK 488 (530)
Q Consensus 458 qs~G~aiD~~G-~LYft~~~~~aI~cWnt~~~ 488 (530)
.-..++++.+| .++++....+.|..||..++
T Consensus 228 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 259 (447)
T 3dw8_B 228 VITAAEFHPNSCNTFVYSSSKGTIRLCDMRAS 259 (447)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTC
T ss_pred ceEEEEECCCCCcEEEEEeCCCeEEEEECcCC
Confidence 35567788887 88888888899999998733
No 257
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=77.07 E-value=84 Score=33.73 Aligned_cols=78 Identities=8% Similarity=-0.005 Sum_probs=46.0
Q ss_pred EEEEEEEeCCCcE--EEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEE
Q psy11539 241 SVFRMSVDKCDRL--WIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 318 (530)
Q Consensus 241 SV~rv~ID~cgRL--WVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~A 318 (530)
++.++.+-++|+. +.+|.+-.+ ...|.++|+.+++.+.. .++. .-+..++.- + .++.++
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~---------~~~i~v~d~~tg~~~~~-~~~~------~~~~~~~ws--p-Dg~~l~ 186 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSD---------WVTIKFMKVDGAKELPD-VLER------VKFSCMAWT--H-DGKGMF 186 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCS---------CEEEEEEETTTTEEEEE-EEEE------ECSCCEEEC--T-TSSEEE
T ss_pred EEEEEEECCCCCEEEEEEcCCCCc---------eEEEEEEECCCCCCCcc-cccC------cccceEEEE--e-CCCEEE
Confidence 6677788788763 445543211 13699999999987653 2211 112344442 2 145778
Q ss_pred EEecCCC--------------CeEEEEEccCCe
Q psy11539 319 YVNDVFR--------------YGLIVYDFFKNT 337 (530)
Q Consensus 319 YItDsg~--------------~gLIVyDl~~g~ 337 (530)
|.++... ..|.++++.++.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 187 YNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp EEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred EEEECCccccccccccccCCCCEEEEEECCCCc
Confidence 8876543 238888887764
No 258
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=75.50 E-value=9.4 Score=42.16 Aligned_cols=76 Identities=24% Similarity=0.297 Sum_probs=54.1
Q ss_pred CCceEEEEEEEeCCCcEEE-EeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCC
Q psy11539 237 NSLISVFRMSVDKCDRLWI-MDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDH 315 (530)
Q Consensus 237 ~~LvSV~rv~ID~cgRLWV-LDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~ 315 (530)
+.|.|+-.+.+|..|+||| -|.+... .+.....+...++.+|..++++.+...-|. ..-++.|++. .++
T Consensus 473 ~~fnsPDnL~fd~~G~LWf~TD~~~~~-~g~~~~~gnn~v~~~dp~tGel~~fl~~P~-----~aEpnGiafS----PD~ 542 (592)
T 4a9v_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSN-AGDFAGMGNNQMLCADPATGEIRRFMVGPI-----GCEVTGISFS----PDQ 542 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCC-SGGGTTCCSCEEEEECTTTCCEEEEEECCT-----TCEEEEEEEC----TTS
T ss_pred CccCCCCceEECCCCCEEEEeCCCcCc-cccccccCCceEEEEeCCCCeEEEEEeCCC-----CccccCCEEC----CCC
Confidence 5699999999999999999 7976421 111122355689999999999876555443 3446788886 356
Q ss_pred eEEEEec
Q psy11539 316 VFAYVND 322 (530)
Q Consensus 316 ~~AYItD 322 (530)
..+||+=
T Consensus 543 ktLfV~v 549 (592)
T 4a9v_A 543 KTLFVGI 549 (592)
T ss_dssp SEEEEEE
T ss_pred CEEEEEE
Confidence 7888863
No 259
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=75.01 E-value=65 Score=31.46 Aligned_cols=32 Identities=6% Similarity=0.122 Sum_probs=26.6
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCCCCcc
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTKTKVY 490 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~~ 490 (530)
.-.++++..+|.+.++-...+.|..|+.. ..|
T Consensus 314 ~V~~v~fSpdg~~laS~S~D~tvrvw~ip-~~~ 345 (365)
T 4h5i_A 314 AITEVTISPDSTYVASVSAANTIHIIKLP-LNY 345 (365)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEECC-TTT
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEEcC-CCC
Confidence 34678888999999999999999999986 444
No 260
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=74.56 E-value=87 Score=32.72 Aligned_cols=28 Identities=4% Similarity=0.031 Sum_probs=19.4
Q ss_pred CcceEEcCCCcEEEEccCCC--eEEEEeCC
Q psy11539 459 ASASAINSNGVMFYNLVTKH--SVGCWNTK 486 (530)
Q Consensus 459 s~G~aiD~~G~LYft~~~~~--aI~cWnt~ 486 (530)
....+...+|.|||..-..+ .|+.||..
T Consensus 244 ~~~~~~spdg~l~~~~~~~~~~~l~~~~~~ 273 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATDRTGWWNLHRVDPA 273 (662)
T ss_dssp EEEEEECTTSCEEEEECTTSSCEEEEECTT
T ss_pred EcceEECCCCeEEEEECCCCCeEEEEEECC
Confidence 34556777787877754444 79999975
No 261
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=74.32 E-value=12 Score=38.79 Aligned_cols=76 Identities=16% Similarity=0.182 Sum_probs=53.6
Q ss_pred EEEEEEEeC-CCcEEEEeCCCCCcccCccccCCCEEEEEECC-----CCcEEEEEECCCcccccCccccceEEEeecCCC
Q psy11539 241 SVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLK-----TNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCD 314 (530)
Q Consensus 241 SV~rv~ID~-cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~-----Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~ 314 (530)
.+-++.+|+ .|+|||-+-.. . |+.||.+ +++++.++..+ .+... ...|+|+...+ .
T Consensus 181 q~EgcvvDd~~g~Lyv~eEd~-G------------Iw~~da~p~~~~~~~~v~~~~~g--~l~aD--vEGLai~~~~~-g 242 (355)
T 3amr_A 181 QTEGMAADDEYGRLYIAEEDE-A------------IWKFSAEPDGGSNGTVIDRADGR--HLTRD--IEGLTIYYAAD-G 242 (355)
T ss_dssp CEEEEEEETTTTEEEEEETTT-E------------EEEEECSTTSCSCCEEEEEBSSS--SBCSC--EEEEEEEECGG-G
T ss_pred CcceEEEcCCCCeEEEecccc-e------------EEEEeCCcCCCCCceEEEEecCC--ccccC--cceEEEEecCC-C
Confidence 477889985 78999998763 2 9999965 45677655332 11111 45677874321 3
Q ss_pred CeEEEEecCCCCeEEEEEcc
Q psy11539 315 HVFAYVNDVFRYGLIVYDFF 334 (530)
Q Consensus 315 ~~~AYItDsg~~gLIVyDl~ 334 (530)
.+|+++++-+...+.|||.+
T Consensus 243 ~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 243 KGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp CEEEEEEEGGGTEEEEEESS
T ss_pred CEEEEEEcCCCCEEEEEECC
Confidence 47999999999999999997
No 262
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=73.86 E-value=9.2 Score=41.94 Aligned_cols=122 Identities=9% Similarity=0.078 Sum_probs=73.0
Q ss_pred EEeCCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCC-------CCCCceEEEEEEEeCCCcEEEEeCC
Q psy11539 187 GIWRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDS-------NCNSLISVFRMSVDKCDRLWIMDTG 259 (530)
Q Consensus 187 ~v~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~-------nc~~LvSV~rv~ID~cgRLWVLDtG 259 (530)
.+.+++||++.+. -.|.-++..++. .+ |+..... .|...++ -++.++ .++|+|....
T Consensus 74 ~v~~g~vyv~~~~------~~v~AlD~~tG~---~~-----W~~~~~~~~~~~~~~~~~~~~-~~~a~~-~~~v~v~~~d 137 (677)
T 1kb0_A 74 VVVDGIMYVSASW------SVVHAIDTRTGN---RI-----WTYDPQIDRSTGFKGCCDVVN-RGVALW-KGKVYVGAWD 137 (677)
T ss_dssp EEETTEEEEECGG------GCEEEEETTTTE---EE-----EEECCCCCGGGGGGSSSCSCC-CCCEEE-TTEEEEECTT
T ss_pred EEECCEEEEECCC------CeEEEEECCCCc---EE-----EEEcCCCCccccccccccCCC-CCceEE-CCEEEEEcCC
Confidence 3569999999763 257777765432 11 2211100 1211111 133443 5788876321
Q ss_pred CCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC-----CCeEEEEEcc
Q psy11539 260 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-----RYGLIVYDFF 334 (530)
Q Consensus 260 ~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg-----~~gLIVyDl~ 334 (530)
-+|+++|++||+++-++....+...........+|+ ++.+|+...+ ...|..||.+
T Consensus 138 -------------g~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~------~~~v~v~~~~~~~~~~g~v~a~D~~ 198 (677)
T 1kb0_A 138 -------------GRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF------KGKVIIGNGGAEYGVRGYITAYDAE 198 (677)
T ss_dssp -------------SEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE------TTEEEECCBCTTTCCBCEEEEEETT
T ss_pred -------------CEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE------CCEEEEEecccccCCCCEEEEEECC
Confidence 359999999999999998862211111223345565 4688998764 4679999999
Q ss_pred CCe-EEEEcC
Q psy11539 335 KNT-SYRLTH 343 (530)
Q Consensus 335 ~g~-swRv~h 343 (530)
+|+ .|++..
T Consensus 199 tG~~~W~~~~ 208 (677)
T 1kb0_A 199 TGERKWRWFS 208 (677)
T ss_dssp TCCEEEEEES
T ss_pred CCcEEEEecc
Confidence 887 588763
No 263
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=73.77 E-value=37 Score=36.80 Aligned_cols=140 Identities=15% Similarity=0.097 Sum_probs=71.9
Q ss_pred hhcCCCcccCCCceeeeEEe-CCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCCCCCCCceEEEEEEEe
Q psy11539 170 LIRSNKFIPENNLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVD 248 (530)
Q Consensus 170 ai~sg~Yip~n~iP~GV~v~-~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~~nc~~LvSV~rv~ID 248 (530)
.+.+|.|.++. ..+... +|+++++- +| +|...+..++.+...+ ..-... .+ -+...++.+.
T Consensus 9 ~~~~~~~~~~~---~~~~w~~dg~~~~~~----~~---~i~~~~~~~~~~~~~~---~~~~~~---~~--~~~~~~~~~S 70 (740)
T 4a5s_A 9 DYLKNTYRLKL---YSLRWISDHEYLYKQ----EN---NILVFNAEYGNSSVFL---ENSTFD---EF--GHSINDYSIS 70 (740)
T ss_dssp HHHHTCSCCCC---CCEEECSSSEEEEEE----TT---EEEEEETTTCCEEEEE---CTTTTT---TC--CSCCCEEEEC
T ss_pred HHhcCcccccc---cccEECCCCcEEEEc----CC---cEEEEECCCCceEEEE---echhhh---hh--cccccceEEC
Confidence 34578887752 256665 67766663 33 6766665433211111 110000 00 1122234555
Q ss_pred CCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeE
Q psy11539 249 KCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGL 328 (530)
Q Consensus 249 ~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gL 328 (530)
.+|+.-+.-++.... .+......+++||++++++.+ |.. ........++ .++ +...||+.| ..|
T Consensus 71 pdg~~l~~~~~~~~~---~r~~~~~~~~~~d~~~~~~~~---l~~----~~~~~~~~~~--SPd-G~~la~~~~---~~i 134 (740)
T 4a5s_A 71 PDGQFILLEYNYVKQ---WRHSYTASYDIYDLNKRQLIT---EER----IPNNTQWVTW--SPV-GHKLAYVWN---NDI 134 (740)
T ss_dssp TTSSEEEEEEEEEEC---SSSCEEEEEEEEETTTTEECC---SSC----CCTTEEEEEE--CSS-TTCEEEEET---TEE
T ss_pred CCCCEEEEEECCeee---EEEccceEEEEEECCCCcEEE---ccc----CCCcceeeEE--CCC-CCEEEEEEC---CeE
Confidence 666643332221000 011123568999999988653 211 1122233333 222 456899977 579
Q ss_pred EEEEccCCeEEEEcC
Q psy11539 329 IVYDFFKNTSYRLTH 343 (530)
Q Consensus 329 IVyDl~~g~swRv~h 343 (530)
.++|..+|+..|+..
T Consensus 135 ~~~~~~~~~~~~lt~ 149 (740)
T 4a5s_A 135 YVKIEPNLPSYRITW 149 (740)
T ss_dssp EEESSTTSCCEECCS
T ss_pred EEEECCCCceEEEcC
Confidence 999999999888764
No 264
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=73.54 E-value=16 Score=38.89 Aligned_cols=58 Identities=16% Similarity=0.166 Sum_probs=31.1
Q ss_pred EEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecC-------CCCeEEEEEccCCeE
Q psy11539 275 IMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV-------FRYGLIVYDFFKNTS 338 (530)
Q Consensus 275 LvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDs-------g~~gLIVyDl~~g~s 338 (530)
|.+||+.+++..+...-... .......+++- ++ ++..||.++. ....|.++|+.+|+.
T Consensus 38 i~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~S--pD-g~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 38 IVLYNIETGQSYTILSNRTM---KSVNASNYGLS--PD-RQFVYLESDYSKLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp EEEEESSSCCEEEEECHHHH---HTTTCSEEEEC--TT-SSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred EEEEEcCCCcEEEEEccccc---cccceeeEEEC--CC-CCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence 77777777776543322110 00012334442 21 3345666662 246789999998876
No 265
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=73.54 E-value=57 Score=30.93 Aligned_cols=81 Identities=14% Similarity=-0.043 Sum_probs=44.6
Q ss_pred eEEEEEEEeCCCc-EEEE--eCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCe
Q psy11539 240 ISVFRMSVDKCDR-LWIM--DTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 316 (530)
Q Consensus 240 vSV~rv~ID~cgR-LWVL--DtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~ 316 (530)
..+..+...++|+ |.++ +.|.. .-.|.+||+.++++.....++. .. +++. + .++.
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~~----------~~~l~~~d~~~g~~~~l~~~~~--------~~-~~~s--~-~dg~ 295 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQT----------DRVIYKANPETLENEEVMVMPP--------CS-HLMS--N-FDGS 295 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTTC----------CEEEEEECTTTCCEEEEEECCS--------EE-EEEE--C-SSSS
T ss_pred ccccceEECCCCCEEEEEecCCCCc----------cceEEEEECCCCCeEEeeeCCC--------CC-CCcc--C-CCCc
Confidence 3566677777775 4443 22210 1239999999988765555542 11 3332 1 0222
Q ss_pred EEEEec---------------CCCCeEEEEEccCCeEEEEc
Q psy11539 317 FAYVND---------------VFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 317 ~AYItD---------------sg~~gLIVyDl~~g~swRv~ 342 (530)
.++.+- .+...|.++|+.+++..++.
T Consensus 296 ~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 296 LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp EEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred eEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 333221 23467999999988655544
No 266
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=72.94 E-value=1.1e+02 Score=33.09 Aligned_cols=65 Identities=14% Similarity=0.054 Sum_probs=34.5
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC-------CCeEEEEEccCCeEEEEc
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-------RYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg-------~~gLIVyDl~~g~swRv~ 342 (530)
.|..||++|++....+.-... ..-...++++.+- ++ ....||.++.. ...+.+||+.+|+..++.
T Consensus 37 ~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~S--pd-g~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~ 108 (740)
T 4a5s_A 37 NILVFNAEYGNSSVFLENSTF-DEFGHSINDYSIS--PD-GQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEE 108 (740)
T ss_dssp EEEEEETTTCCEEEEECTTTT-TTCCSCCCEEEEC--TT-SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS
T ss_pred cEEEEECCCCceEEEEechhh-hhhcccccceEEC--CC-CCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcc
Confidence 388888888886544333211 0001112234443 21 23446666532 256789999999766543
No 267
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=72.75 E-value=85 Score=31.77 Aligned_cols=31 Identities=16% Similarity=0.302 Sum_probs=23.8
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCCCCc
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTKTKV 489 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~ 489 (530)
.-..+++..+|.+.++--....|..||.. +.
T Consensus 510 ~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~ 540 (577)
T 2ymu_A 510 SVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ 540 (577)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEECTT-SC
T ss_pred CEEEEEEcCCCCEEEEEECcCEEEEEeCC-CC
Confidence 34567788888888877778899999976 53
No 268
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=72.73 E-value=67 Score=30.60 Aligned_cols=74 Identities=11% Similarity=0.162 Sum_probs=45.7
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+.+..++++-+ +|..+ -.|.+||+++++.++++.-.. ..+..+++. .++.++..
T Consensus 78 ~V~~~~~~~~~~~l~--s~s~D----------~~v~lwd~~~~~~~~~~~~h~------~~v~~v~~s----p~~~~l~s 135 (343)
T 2xzm_R 78 FVSDLALSQENCFAI--SSSWD----------KTLRLWDLRTGTTYKRFVGHQ------SEVYSVAFS----PDNRQILS 135 (343)
T ss_dssp CEEEEEECSSTTEEE--EEETT----------SEEEEEETTSSCEEEEEECCC------SCEEEEEEC----SSTTEEEE
T ss_pred ceEEEEECCCCCEEE--EEcCC----------CcEEEEECCCCcEEEEEcCCC------CcEEEEEEC----CCCCEEEE
Confidence 466667777766544 23222 459999999999988776422 234555554 23444444
Q ss_pred ecCCCCeEEEEEccCCe
Q psy11539 321 NDVFRYGLIVYDFFKNT 337 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~ 337 (530)
+. ....|.+||+....
T Consensus 136 ~~-~d~~i~~wd~~~~~ 151 (343)
T 2xzm_R 136 AG-AEREIKLWNILGEC 151 (343)
T ss_dssp EE-TTSCEEEEESSSCE
T ss_pred Ec-CCCEEEEEeccCCc
Confidence 33 45689999998543
No 269
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=72.47 E-value=86 Score=31.73 Aligned_cols=31 Identities=16% Similarity=0.302 Sum_probs=24.4
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCCCCc
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTKTKV 489 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~ 489 (530)
.-..++++.+|.+.++-.....|..||.. +.
T Consensus 469 ~v~~~~~spd~~~las~~~d~~i~iw~~~-~~ 499 (577)
T 2ymu_A 469 SVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ 499 (577)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETT-SC
T ss_pred CEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CC
Confidence 34567788888888888788899999977 54
No 270
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=72.17 E-value=56 Score=29.63 Aligned_cols=74 Identities=14% Similarity=0.020 Sum_probs=47.2
Q ss_pred EEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEe
Q psy11539 242 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 321 (530)
Q Consensus 242 V~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYIt 321 (530)
+..+.....++|.+.... -.|.+||+.+++.++++.-.. ..+..+++. .++. +++
T Consensus 187 i~~~~~~~~~~~~~~~~d-------------g~i~i~d~~~~~~~~~~~~~~------~~i~~~~~~-----~~~~-l~~ 241 (313)
T 3odt_A 187 VRHLAVVDDGHFISCSND-------------GLIKLVDMHTGDVLRTYEGHE------SFVYCIKLL-----PNGD-IVS 241 (313)
T ss_dssp EEEEEEEETTEEEEEETT-------------SEEEEEETTTCCEEEEEECCS------SCEEEEEEC-----TTSC-EEE
T ss_pred EEEEEEcCCCeEEEccCC-------------CeEEEEECCchhhhhhhhcCC------ceEEEEEEe-----cCCC-EEE
Confidence 455666666664443322 359999999999998876422 335566665 2333 333
Q ss_pred cCCCCeEEEEEccCCeEEE
Q psy11539 322 DVFRYGLIVYDFFKNTSYR 340 (530)
Q Consensus 322 Dsg~~gLIVyDl~~g~swR 340 (530)
=...+.|.+||+.+++.-+
T Consensus 242 ~~~dg~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 242 CGEDRTVRIWSKENGSLKQ 260 (313)
T ss_dssp EETTSEEEEECTTTCCEEE
T ss_pred EecCCEEEEEECCCCceeE
Confidence 3456789999999886544
No 271
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=72.00 E-value=35 Score=32.14 Aligned_cols=85 Identities=11% Similarity=0.004 Sum_probs=48.2
Q ss_pred ceEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEE
Q psy11539 239 LISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 318 (530)
Q Consensus 239 LvSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~A 318 (530)
+..+..+.+|..-.+|+....... .......|+++|+.+++..+ + .....+++- ++ +...|
T Consensus 14 ~~~~~~~~~dG~~i~~~~~~~~~~-----~~~~~~~l~~~d~~~~~~~~-l----------~~~~~~~~S--pD-g~~la 74 (347)
T 2gop_A 14 FAYLSDPRTKGELVAYVLTKANLK-----DNKYENTIVIENLKNNARRF-I----------ENATMPRIS--PD-GKKIA 74 (347)
T ss_dssp SCEEEEEEEETTEEEEEEEEEETT-----TTEEEEEEEEEETTTCCEEE-E----------ESCEEEEEC--TT-SSEEE
T ss_pred eEEcccceECCcEEEEEEeecCcc-----cCCccceEEEEeCCCCceEE-c----------ccCCCeEEC--CC-CCEEE
Confidence 445555555555445665432211 01123569999999887543 2 112233442 21 34577
Q ss_pred EEecCC---CCeEEEEEccCCeEEEEc
Q psy11539 319 YVNDVF---RYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 319 YItDsg---~~gLIVyDl~~g~swRv~ 342 (530)
|+.+.. ...|.++|+.+++..++.
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~g~~~~l~ 101 (347)
T 2gop_A 75 FMRANEEKKVSEIWVADLETLSSKKIL 101 (347)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred EEEeccCCCcceEEEEECCCCceEEEE
Confidence 777653 446999999999877765
No 272
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=71.43 E-value=7.1 Score=42.96 Aligned_cols=64 Identities=17% Similarity=0.211 Sum_probs=42.5
Q ss_pred CCCEEEEEECCCCcEEEEEECCCcccccCccccceE-EEeecCCCCeEEEEecCCCCeEEEEEccCC
Q psy11539 271 CPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIV-TEVVEDCDHVFAYVNDVFRYGLIVYDFFKN 336 (530)
Q Consensus 271 c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIv-VDv~~~c~~~~AYItDsg~~gLIVyDl~~g 336 (530)
..+.|+++|++||++++++..+.... ..+.|..++ +|...+---.+||..|.+ +.|..+|+...
T Consensus 221 ~~~~Lyv~d~~tG~li~~i~~~~~~~-~~~Gls~~~~~D~d~Dg~~D~~YaGDl~-GnlWRfDl~~~ 285 (570)
T 3hx6_A 221 DKAALLIIDMETGAITRKLEVTGRTG-VPNGLSSPRLADNNSDGVADYAYAGDLQ-GNLWRFDLIAG 285 (570)
T ss_dssp CCEEEEEEETTTCCEEEEEEECCSTT-SCCCEEEEEEECTTSSSBCCEEEEEETT-SEEEEEECSCS
T ss_pred CccEEEEEECCCCceEEEEecCCCCc-cCCccccceEEecCCCCceeEEEEEeCC-CcEEEEEcCCC
Confidence 46899999999999999999864321 224455544 553222223589999975 36666777654
No 273
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=70.13 E-value=65 Score=29.35 Aligned_cols=41 Identities=10% Similarity=0.210 Sum_probs=27.9
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCC
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPT 293 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~ 293 (530)
.|..+....+|++.+. |..+ -.|.+||+++++.++++.-..
T Consensus 69 ~V~~v~~~~~~~~l~s--gs~D----------g~v~iw~~~~~~~~~~~~~h~ 109 (318)
T 4ggc_A 69 YISSVAWIKEGNYLAV--GTSS----------AEVQLWDVQQQKRLRNMTSHS 109 (318)
T ss_dssp CEEEEEECTTSSEEEE--EETT----------SEEEEEETTTTEEEEEEECCS
T ss_pred eEEEEEECCCCCEEEE--EECC----------CcEEEeecCCceeEEEecCcc
Confidence 4666777777776553 3222 348889999998888776543
No 274
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=68.96 E-value=8 Score=38.61 Aligned_cols=68 Identities=10% Similarity=0.003 Sum_probs=40.9
Q ss_pred CCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEE
Q psy11539 250 CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLI 329 (530)
Q Consensus 250 cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLI 329 (530)
.++|++.... -.|++||++||+++-++.. ..+. ...+++ ++.+|++.+....|+
T Consensus 9 ~~~v~~gs~d-------------g~v~a~d~~tG~~~W~~~~-~~~~------s~p~~~------~g~~~v~~s~dg~l~ 62 (369)
T 2hz6_A 9 ETLLFVSTLD-------------GSLHAVSKRTGSIKWTLKE-DPVL------QVPTHV------EEPAFLPDPNDGSLY 62 (369)
T ss_dssp TTEEEEEETT-------------SEEEEEETTTCCEEEEEEC-CCSC------CCC-----------CCEEECTTTCCEE
T ss_pred CCEEEEEcCC-------------CEEEEEECCCCCEEEEecC-CCce------ecceEc------CCCEEEEeCCCCEEE
Confidence 5677776431 2599999999999998887 3321 222333 356788777778899
Q ss_pred EEEccCCe-EEEEcC
Q psy11539 330 VYDFFKNT-SYRLTH 343 (530)
Q Consensus 330 VyDl~~g~-swRv~h 343 (530)
.+|.++|+ .|+...
T Consensus 63 a~d~~tG~~~w~~~~ 77 (369)
T 2hz6_A 63 TLGSKNNEGLTKLPF 77 (369)
T ss_dssp EC-----CCSEECSC
T ss_pred EEECCCCceeeeeec
Confidence 99998876 477653
No 275
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=68.85 E-value=23 Score=38.82 Aligned_cols=120 Identities=11% Similarity=0.112 Sum_probs=71.3
Q ss_pred EEeCCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCC--------CCCCCceEEEEEEEeCCCcEEEEeC
Q psy11539 187 GIWRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDD--------SNCNSLISVFRMSVDKCDRLWIMDT 258 (530)
Q Consensus 187 ~v~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~--------~nc~~LvSV~rv~ID~cgRLWVLDt 258 (530)
.+.+++||++.+. ..|.-++..++. .+ |+.... ..|..+.+ ++.++ .++|++...
T Consensus 67 ~v~~g~vyv~~~~------~~v~AlD~~tG~---~~-----W~~~~~~~~~~~~~~~~~~~~~--~~~~~-~g~v~v~~~ 129 (689)
T 1yiq_A 67 IVVDGVMYTTGPF------SVVYALDARDGR---LI-----WKYDPQSDRHRAGEACCDAVNR--GVAVW-KGKVYVGVL 129 (689)
T ss_dssp EEETTEEEEECGG------GCEEEEETTTCC---EE-----EEECCCCCGGGGGGCTTCSCCC--CCEEE-TTEEEEECT
T ss_pred EEECCEEEEEcCC------CeEEEEECCCCc---ee-----EEEcCCCCccccccccccCCCC--ccEEE-CCEEEEEcc
Confidence 3679999999753 257778875432 22 322110 11322211 22333 567777642
Q ss_pred CCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC-----CCeEEEEEc
Q psy11539 259 GVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-----RYGLIVYDF 333 (530)
Q Consensus 259 G~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg-----~~gLIVyDl 333 (530)
.-.|+++|.+||+++-++....+...........+|. ++.+|+...+ ...|+.||.
T Consensus 130 -------------dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~------~g~v~vg~~~~~~~~~g~v~a~D~ 190 (689)
T 1yiq_A 130 -------------DGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV------NGKVVIGNGGAEFGVRGYVTAYDA 190 (689)
T ss_dssp -------------TSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE------TTEEEECCBCTTTCCBCEEEEEET
T ss_pred -------------CCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEE------CCEEEEEeCCCccCCCCEEEEEEC
Confidence 1359999999999999988751111111222233443 4678887543 467999999
Q ss_pred cCCe-EEEEc
Q psy11539 334 FKNT-SYRLT 342 (530)
Q Consensus 334 ~~g~-swRv~ 342 (530)
++|+ .|++.
T Consensus 191 ~tG~~~W~~~ 200 (689)
T 1yiq_A 191 ETGKEAWRFY 200 (689)
T ss_dssp TTCCEEEEEE
T ss_pred CCCcEEEEec
Confidence 9987 48876
No 276
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=68.65 E-value=94 Score=31.56 Aligned_cols=29 Identities=10% Similarity=0.019 Sum_probs=23.2
Q ss_pred CCcceEEcCC-CcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSN-GVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~-G~LYft~~~~~aI~cWnt~ 486 (530)
.-.++++..+ +.++++-...+.|..||..
T Consensus 151 ~V~~v~~~p~~~~~las~s~Dg~v~iwD~~ 180 (434)
T 2oit_A 151 MVIDMKWNPTVPSMVAVCLADGSIAVLQVT 180 (434)
T ss_dssp SEEEEEECSSCTTEEEEEETTSCEEEEEES
T ss_pred ceEEEEECCCCCCEEEEEECCCeEEEEEcC
Confidence 4566777755 7888888888999999988
No 277
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=65.22 E-value=80 Score=28.58 Aligned_cols=29 Identities=0% Similarity=-0.082 Sum_probs=22.3
Q ss_pred CCcceEEcCCC----cEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNG----VMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G----~LYft~~~~~aI~cWnt~ 486 (530)
.-..+++..+| .++++-...+.|..||..
T Consensus 216 ~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 216 LIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp CEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred ceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 34567777776 777777788889999987
No 278
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=64.91 E-value=23 Score=32.27 Aligned_cols=72 Identities=7% Similarity=0.017 Sum_probs=45.6
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.+..+....+++|..... .-+|.+||++++++++++..+.. .+..+.+. .++. ++
T Consensus 227 ~i~~~~~~~~~~l~~~~~-------------dg~v~iwd~~~~~~~~~~~~~~~------~i~~~~~~-----~~~~-~~ 281 (313)
T 3odt_A 227 FVYCIKLLPNGDIVSCGE-------------DRTVRIWSKENGSLKQVITLPAI------SIWSVDCM-----SNGD-II 281 (313)
T ss_dssp CEEEEEECTTSCEEEEET-------------TSEEEEECTTTCCEEEEEECSSS------CEEEEEEC-----TTSC-EE
T ss_pred eEEEEEEecCCCEEEEec-------------CCEEEEEECCCCceeEEEeccCc------eEEEEEEc-----cCCC-EE
Confidence 355566666665544322 24599999999999998877542 34555554 2222 44
Q ss_pred ecCCCCeEEEEEccCCe
Q psy11539 321 NDVFRYGLIVYDFFKNT 337 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~ 337 (530)
+=...+.|.+||+.+++
T Consensus 282 ~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 282 VGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp EEETTSCEEEEESCGGG
T ss_pred EEeCCCcEEEEeCCCCc
Confidence 43446689999998873
No 279
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=64.68 E-value=28 Score=37.47 Aligned_cols=62 Identities=6% Similarity=0.086 Sum_probs=43.4
Q ss_pred EEEEEECCCCcEEEEEECCCccccc---CccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeE-EEEc
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFE---GSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS-YRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~---~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~s-wRv~ 342 (530)
.|+++|++||+++-++.++...... ...-..++++ ++.+|+... ...|+.+|.++|+. |+..
T Consensus 79 ~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~------~~~v~~~t~-dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 79 RLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIY------GDKVFFGTL-DASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp EEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEE------TTEEEEEET-TTEEEEEESSSCCEEEEEE
T ss_pred CEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEE------CCEEEEEeC-CCEEEEEECCCCCEEeeec
Confidence 4999999999999999886542110 0011345565 568888754 45899999998875 8875
No 280
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=63.89 E-value=35 Score=37.23 Aligned_cols=120 Identities=14% Similarity=0.127 Sum_probs=72.5
Q ss_pred EEeCCeEEEEccCCCCCCCcEEEEEECCCCCCCCccCCCCCCCcCCC--------CCCCCceEEEEEEEeCCCcEEEEeC
Q psy11539 187 GIWRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDD--------SNCNSLISVFRMSVDKCDRLWIMDT 258 (530)
Q Consensus 187 ~v~~gRlFVTiPR~~~GvP~TLa~V~~~~~~~sP~L~PYPsw~wn~~--------~nc~~LvSV~rv~ID~cgRLWVLDt 258 (530)
.+.+++||++.+. ..|.-++..++. .+ |+.... ..|.... -++.++ .++|+|...
T Consensus 63 ~v~~g~vyv~~~~------~~v~AlD~~tG~---~~-----W~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~v~v~~~ 125 (668)
T 1kv9_A 63 LFHDGVIYTSMSW------SRVIAVDAASGK---EL-----WRYDPEVAKVKARTSCCDAVN--RGVALW-GDKVYVGTL 125 (668)
T ss_dssp EEETTEEEEEEGG------GEEEEEETTTCC---EE-----EEECCCCCGGGGGGCTTCSCC--CCCEEE-BTEEEEECT
T ss_pred EEECCEEEEECCC------CeEEEEECCCCh---hc-----eEECCCCCccccccccccCCc--cceEEE-CCEEEEEcC
Confidence 4679999999753 268888875433 22 332211 1122211 122333 567877642
Q ss_pred CCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCC-----CCeEEEEEc
Q psy11539 259 GVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-----RYGLIVYDF 333 (530)
Q Consensus 259 G~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg-----~~gLIVyDl 333 (530)
.-+|+++|.+||+++-++.+.... .........+|+ ++.+|+...+ ...|..||.
T Consensus 126 -------------dg~l~alD~~tG~~~W~~~~~~~~-~~~~~~~~P~v~------~~~v~vg~~~~~~~~~g~v~a~D~ 185 (668)
T 1kv9_A 126 -------------DGRLIALDAKTGKAIWSQQTTDPA-KPYSITGAPRVV------KGKVIIGNGGAEYGVRGFVSAYDA 185 (668)
T ss_dssp -------------TSEEEEEETTTCCEEEEEECSCTT-SSCBCCSCCEEE------TTEEEECCBCTTTCCBCEEEEEET
T ss_pred -------------CCEEEEEECCCCCEeeeeccCCCC-CcceecCCCEEE------CCEEEEeCCCCCcCCCCEEEEEEC
Confidence 135999999999999999884321 111122334554 4678887654 467999999
Q ss_pred cCCeE-EEEcC
Q psy11539 334 FKNTS-YRLTH 343 (530)
Q Consensus 334 ~~g~s-wRv~h 343 (530)
++|+. |++..
T Consensus 186 ~tG~~~W~~~~ 196 (668)
T 1kv9_A 186 DTGKLAWRFYT 196 (668)
T ss_dssp TTCCEEEEEES
T ss_pred CCCcEEEEecc
Confidence 98875 88753
No 281
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=62.04 E-value=12 Score=38.87 Aligned_cols=78 Identities=12% Similarity=0.110 Sum_probs=56.1
Q ss_pred EeCCCcEEEEeCCCCCcccCccccCCC--EEEEEECCCCcEEEEEECCCcccccCccccce--EEEeecCCCCeEEEEec
Q psy11539 247 VDKCDRLWIMDTGVTNILSSIQQLCPP--KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNI--VTEVVEDCDHVFAYVND 322 (530)
Q Consensus 247 ID~cgRLWVLDtG~~~~~~~~~~~c~P--KLvvfDL~Td~li~~y~~P~~v~~~~S~lndI--vVDv~~~c~~~~AYItD 322 (530)
.|...-|..++.-. + +|.+|||++.+++++|.|..+- +. .+..+ .+.+. +..-+||++
T Consensus 36 ~~~k~yL~~~N~~~------------~~~~i~~iDL~~~kl~k~i~~ekEG--PN-gi~~~~~~~~i~---~~DsI~i~~ 97 (369)
T 3s9j_A 36 ENGKEYLHFENTQK------------SLYDIVIFDIENQQIAKRIPLHKTG--PN-GLPAVFGSRPSP---DSQYILVAQ 97 (369)
T ss_dssp ETTEEEEEEEECST------------TCCEEEEEETTTTEEEEEEECBSSS--TT-BCTTCCCEEESS---STTSEEEEE
T ss_pred cCCcEEEEEeCCCC------------CcCcEEEEECCCCceeeeeccccCC--CC-CcccceeeEEec---CCCEEEEEe
Confidence 55555677777643 4 6999999999999999996652 11 12222 23322 456889999
Q ss_pred CCCCeEEEEEccCCeEEEEc
Q psy11539 323 VFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 323 sg~~gLIVyDl~~g~swRv~ 342 (530)
...++|.++|.......++.
T Consensus 98 ~~~~~i~l~n~~G~~~~k~~ 117 (369)
T 3s9j_A 98 NNISRLSSINSQGEIIRNYN 117 (369)
T ss_dssp GGGTEEEEECTTCCEEEEEE
T ss_pred CCcceEEEECCCceEEEEEe
Confidence 99899999999988888874
No 282
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=57.42 E-value=2.5e+02 Score=31.62 Aligned_cols=72 Identities=17% Similarity=0.283 Sum_probs=48.4
Q ss_pred EEEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEE
Q psy11539 241 SVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 319 (530)
Q Consensus 241 SV~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AY 319 (530)
.|..+.... |+ |-..+.. -.|.+||+.+++.++++..+. ....++++ .++.+++
T Consensus 60 ~V~~l~fsp-g~~L~S~s~D-------------~~v~lWd~~~~~~~~~~~~~~-------~V~~v~~s----p~g~~l~ 114 (902)
T 2oaj_A 60 AIKEMRFVK-GIYLVVINAK-------------DTVYVLSLYSQKVLTTVFVPG-------KITSIDTD----ASLDWML 114 (902)
T ss_dssp CEEEEEEET-TTEEEEEETT-------------CEEEEEETTTCSEEEEEECSS-------CEEEEECC----TTCSEEE
T ss_pred CEEEEEEcC-CCEEEEEECc-------------CeEEEEECCCCcEEEEEcCCC-------CEEEEEEC----CCCCEEE
Confidence 466777777 66 3333321 359999999999998886432 23445554 3567777
Q ss_pred EecCCCCeEEEEEccCCeE
Q psy11539 320 VNDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 320 ItDsg~~gLIVyDl~~g~s 338 (530)
+.+. .+.|.+||+++++.
T Consensus 115 sgs~-dg~V~lwd~~~~~~ 132 (902)
T 2oaj_A 115 IGLQ-NGSMIVYDIDRDQL 132 (902)
T ss_dssp EEET-TSCEEEEETTTTEE
T ss_pred EEcC-CCcEEEEECCCCcc
Confidence 7764 46799999998864
No 283
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=51.55 E-value=19 Score=39.61 Aligned_cols=66 Identities=11% Similarity=0.151 Sum_probs=43.5
Q ss_pred CCCcceEEc-CCCcEEEEccCC---------------------CeEEEEeCCCCccccCce--eEEe--e----------
Q psy11539 457 TQASASAIN-SNGVMFYNLVTK---------------------HSVGCWNTKTKVYLPQTQ--DIVQ--T---------- 500 (530)
Q Consensus 457 sqs~G~aiD-~~G~LYft~~~~---------------------~aI~cWnt~~~~~~~~n~--~lV~--~---------- 500 (530)
..+-|++++ .+|.|||+..+. ..|++|+++........+ +++. .
T Consensus 384 ~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~ 463 (592)
T 3zwu_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred eccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccccc
Confidence 346788898 789999997743 469999875222211111 1211 1
Q ss_pred -------cCCceeecceeEEecCCcEEEE
Q psy11539 501 -------SRDILNFREEGEEEEEKENTCT 522 (530)
Q Consensus 501 -------d~~~L~~Pd~l~Id~dG~lYv~ 522 (530)
+...|.-||.|+++..|.|||.
T Consensus 464 ~~~~~~~~~~~f~~PDNL~fd~~G~LwI~ 492 (592)
T 3zwu_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWIL 492 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEE
T ss_pred ccccccCCCCCccCCcceEECCCCCEEEE
Confidence 1224788999999999998884
No 284
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=51.04 E-value=2.6e+02 Score=29.91 Aligned_cols=27 Identities=11% Similarity=-0.012 Sum_probs=20.4
Q ss_pred CCeEEEEecCCCC---eEEEEEccCCeEEE
Q psy11539 314 DHVFAYVNDVFRY---GLIVYDFFKNTSYR 340 (530)
Q Consensus 314 ~~~~AYItDsg~~---gLIVyDl~~g~swR 340 (530)
+...||..|.++. .|.|+|+.+|+..+
T Consensus 136 g~~la~~~~~~G~~~~~i~v~d~~tg~~~~ 165 (710)
T 2xdw_A 136 GEYFAYGLSASGSDWVTIKFMKVDGAKELP 165 (710)
T ss_dssp SSEEEEEEEETTCSCEEEEEEETTTTEEEE
T ss_pred CCEEEEEEcCCCCceEEEEEEECCCCCCCc
Confidence 4567888876543 89999999997655
No 285
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=50.34 E-value=2.4e+02 Score=29.35 Aligned_cols=84 Identities=8% Similarity=-0.056 Sum_probs=42.7
Q ss_pred eEEEEEEEeCCCc-EEEEeCCCCCcccCccccCCCEEEEEECCC------CcEEEEEECCCcccccCccccceEEEeecC
Q psy11539 240 ISVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKT------NTLIRKYILPTAQVFEGSLFSNIVTEVVED 312 (530)
Q Consensus 240 vSV~rv~ID~cgR-LWVLDtG~~~~~~~~~~~c~PKLvvfDL~T------d~li~~y~~P~~v~~~~S~lndIvVDv~~~ 312 (530)
..+..+....+|+ |.+....... .........|++||+.+ +++.+ +.. ........+++.
T Consensus 130 ~~~~~~~~spDg~~l~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~---l~~---~~~~~~~~~~~S---- 196 (662)
T 3azo_A 130 LRWADPVLLPERGEVWCMAEEFTG---EGPSDVRRFLAAVPLDGSAAADRSAVRE---LSD---DAHRFVTGPRLS---- 196 (662)
T ss_dssp EEEEEEEEETTTTEEEEEEEEECS---SSTTCEEEEEEEEETTSTTTTCGGGSEE---SSC---SCSSEECCCEEC----
T ss_pred ccccCcEECCCCCEEEEEEecccC---CCCCCceeEEEEEECCCCccccCCceeE---EEe---cCCCcccCceEC----
Confidence 3556677777775 4433211000 00012235799999988 65532 210 112334445554
Q ss_pred CCCe-EEEEecCC------CCeEEEEEcc-CC
Q psy11539 313 CDHV-FAYVNDVF------RYGLIVYDFF-KN 336 (530)
Q Consensus 313 c~~~-~AYItDsg------~~gLIVyDl~-~g 336 (530)
.++. .||.+... ...|.++|+. +|
T Consensus 197 pDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g 228 (662)
T 3azo_A 197 PDGRQAVWLAWDHPRMPWEGTELKTARVTEDG 228 (662)
T ss_dssp TTSSEEEEEEECTTCCTTTCEEEEEEEECTTS
T ss_pred CCCCEEEEEECCCCCCCCCCcEEEEEEECCCC
Confidence 2344 45555332 2579999999 56
No 286
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=49.37 E-value=1.6e+02 Score=27.23 Aligned_cols=178 Identities=8% Similarity=-0.001 Sum_probs=0.0
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCC--eEEEEecCCCCeEEEEEccCCeEEEEcCCCCCcCCC
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDH--VFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPT 351 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~--~~AYItDsg~~gLIVyDl~~g~swRv~h~sf~pdP~ 351 (530)
+|.+||+.+++......+... ......+++. .+ +...++=+.+..|.+||++++..+....-.-+..
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~h----~~~v~~v~~~-----p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~-- 146 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAVH----SASVNSVQWA-----PHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-- 146 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECCC----SSCEEEEEEC-----CGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS--
T ss_pred EEEEEEcCCCceEEEEEeecC----CCceeEEEeC-----cCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccC--
Q ss_pred cceeeecCeEeeecCCccceecCCC-------------cccccccCCCcccccccccccCCccccccccCCCceEEEEeC
Q psy11539 352 QSTYILDNLKFRWVDGIFGMAISPE-------------LSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSM 418 (530)
Q Consensus 352 ~~~f~I~G~~f~~~dGi~GIALsp~-------------~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~pl 418 (530)
++..++++|. + +.|.-...
T Consensus 147 ---------------~v~~~~~~p~~~~~~~~~~~~~~~---------------------------------~~l~sgs~ 178 (297)
T 2pm7_B 147 ---------------GVNSASWAPATIEEDGEHNGTKES---------------------------------RKFVTGGA 178 (297)
T ss_dssp ---------------CEEEEEECCCC------------C---------------------------------CEEEEEET
T ss_pred ---------------ccceEeecCCcccccccCCCCCCc---------------------------------ceEEEEcC
Q ss_pred CC-CeeEEEecch----hcCccccCCccccccceEEeccccCCCCCcceEEcCCC---cEEEEccCCCeEEEEeCCCCcc
Q psy11539 419 SS-NRHYYVSTTD----LRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAINSNG---VMFYNLVTKHSVGCWNTKTKVY 490 (530)
Q Consensus 419 sS-~~lY~V~T~~----Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G---~LYft~~~~~aI~cWnt~~~~~ 490 (530)
-+ .++|.+.+.. + ....-|..+ .-..+++..+| .++.+-...+.|..||.. ..-
T Consensus 179 D~~v~lwd~~~~~~~~~~--------------~~~l~~H~~---~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~-~~~ 240 (297)
T 2pm7_B 179 DNLVKIWKYNSDAQTYVL--------------ESTLEGHSD---WVRDVAWSPTVLLRSYMASVSQDRTCIIWTQD-NEQ 240 (297)
T ss_dssp TSCEEEEEEETTTTEEEE--------------EEEECCCSS---CEEEEEECCCCSSSEEEEEEETTSCEEEEEES-STT
T ss_pred CCcEEEEEEcCCCceEEE--------------EEEecCCCC---ceEEEEECCCCCCceEEEEEECCCcEEEEEeC-CCC
Q ss_pred ccCceeEEeecCCceeecceeEEecCCcEEEEEeeceee
Q psy11539 491 LPQTQDIVQTSRDILNFREEGEEEEEKENTCTFLVNKYV 529 (530)
Q Consensus 491 ~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~~~snr~~ 529 (530)
.+....++.. ...-.+...+++..+|.+.+.+..++.|
T Consensus 241 ~~~~~~~~~~-~~~~~~v~~~~~s~~g~~las~~~D~~v 278 (297)
T 2pm7_B 241 GPWKKTLLKE-EKFPDVLWRASWSLSGNVLALSGGDNKV 278 (297)
T ss_dssp SCCEEEESSS-SCCSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred Cccceeeeec-ccCCCcEEEEEECCCCCEEEEEcCCCcE
No 287
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=49.18 E-value=2.7e+02 Score=29.67 Aligned_cols=80 Identities=9% Similarity=0.019 Sum_probs=46.5
Q ss_pred eEEEEEEEeCCCc--EEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeE
Q psy11539 240 ISVFRMSVDKCDR--LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 317 (530)
Q Consensus 240 vSV~rv~ID~cgR--LWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~ 317 (530)
..+.++.+-++|+ ++.+|.+-.+ ...|.+||+.+++.+. +.. +. ......++.- + .+..+
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~---------~~~i~v~dl~tg~~~~----~~~-~~-~~~~~~~~ws--p-Dg~~l 182 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAAD---------EAVLHVIDVDSGEWSK----VDV-IE-GGKYATPKWT--P-DSKGF 182 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCS---------CCEEEEEETTTCCBCS----SCC-BS-CCTTCCCEEC--T-TSSEE
T ss_pred EEEEEEEECCCCCEEEEEECCCCCc---------eEEEEEEECCCCCCcC----Ccc-cC-cccccceEEe--c-CCCEE
Confidence 5677788878876 4556643211 2579999999998641 111 11 1112344443 1 14567
Q ss_pred EEEecCC-----------CCeEEEEEccCCe
Q psy11539 318 AYVNDVF-----------RYGLIVYDFFKNT 337 (530)
Q Consensus 318 AYItDsg-----------~~gLIVyDl~~g~ 337 (530)
+|.+... ...|.++++.++.
T Consensus 183 ~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 183 YYEWLPTDPSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp EEEECCCCTTSCGGGGGGGCEEEEEETTSCG
T ss_pred EEEEecCCCCCccccCCCCCEEEEEECCCCc
Confidence 7776532 2348888888774
No 288
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=48.55 E-value=65 Score=31.45 Aligned_cols=63 Identities=16% Similarity=0.212 Sum_probs=40.7
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.|.+||+++++.++++.++.. ..+..+.+...-. .++...++=+.++.|.+||+.+++.-+..
T Consensus 237 ~i~iwd~~~~~~~~~~~~~~~-----~~v~~~~~~~~~s-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 237 IIDIWDIRFNVLIRSWSFGDH-----APITHVEVCQFYG-KNSVIVVGGSSKTFLTIWNFVKGHCQYAF 299 (437)
T ss_dssp CEEEEETTTTEEEEEEBCTTC-----EEEEEEEECTTTC-TTEEEEEEESTTEEEEEEETTTTEEEEEE
T ss_pred eEEEEEcCCccEEEEEecCCC-----CceEEEEeccccC-CCccEEEEEcCCCcEEEEEcCCCcEEEEE
Confidence 499999999999998877432 2344444431111 23444455555667999999998766544
No 289
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=46.55 E-value=3.6e+02 Score=30.30 Aligned_cols=73 Identities=10% Similarity=0.178 Sum_probs=46.1
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+..+.++++.+. |..+ -.|.+||..+.+.+.. ++. ..-...|++. .+.++.-
T Consensus 19 ~V~~lafspdg~~lAs--gs~D----------g~I~lw~~~~~~~~~~--~~~-----~~~V~~l~fs-----pg~~L~S 74 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAI--ATVT----------GEVHIYGQQQVEVVIK--LED-----RSAIKEMRFV-----KGIYLVV 74 (902)
T ss_dssp CEEEEEEETTTTEEEE--EETT----------SEEEEECSTTCEEEEE--CSS-----CCCEEEEEEE-----TTTEEEE
T ss_pred CcEEEEECCCCCEEEE--EeCC----------CEEEEEeCCCcEEEEE--cCC-----CCCEEEEEEc-----CCCEEEE
Confidence 5778888988887665 2222 3588999987766543 321 2335566665 2334444
Q ss_pred ecCCCCeEEEEEccCCeE
Q psy11539 321 NDVFRYGLIVYDFFKNTS 338 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~s 338 (530)
.+ .+..|.|||+.+++.
T Consensus 75 ~s-~D~~v~lWd~~~~~~ 91 (902)
T 2oaj_A 75 IN-AKDTVYVLSLYSQKV 91 (902)
T ss_dssp EE-TTCEEEEEETTTCSE
T ss_pred EE-CcCeEEEEECCCCcE
Confidence 43 457899999998854
No 290
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=44.21 E-value=1e+02 Score=30.36 Aligned_cols=60 Identities=13% Similarity=0.166 Sum_probs=37.6
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
-.|.+||+.+++.++++..+.. ..+.+..+.+| +.++..+. ..+.|.+||+.+++.-+..
T Consensus 339 g~i~vwd~~~~~~~~~~~~~~~---~~~~v~~~~~~------~~~l~s~~-~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 339 STVKIWDIKTGQCLQTLQGPNK---HQSAVTCLQFN------KNFVITSS-DDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp SCEEEEETTTCCEEEEECSTTS---CSSCEEEEEEC------SSEEEEEE-TTSEEEEEETTTCCEEEEE
T ss_pred CeEEEEECCCCcEEEEEccCCC---CCCCEEEEEEC------CCEEEEEe-CCCeEEEEECCCCceeeee
Confidence 4578888888888877765331 12334555554 34444443 4568999999998765543
No 291
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=42.56 E-value=50 Score=36.75 Aligned_cols=77 Identities=16% Similarity=0.145 Sum_probs=54.5
Q ss_pred ccccCCCceEEEEeCCCCeeEEEecchhcCc---cccCCccccccceEEeccccCCCCCcceEEcCCCcEEEEccCCCeE
Q psy11539 404 KTIRDDQRYMYFHSMSSNRHYYVSTTDLRNS---SRYVNSSDIDEYFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSV 480 (530)
Q Consensus 404 ~~~~~~~r~LYf~plsS~~lY~V~T~~Lrn~---s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI 480 (530)
+.++.+++++|-.-.-|.++..++.+-+.+- .+.+....+..+++ +|- -+-..++|.+|+.|.++.-.+.|
T Consensus 328 v~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~Gl-----GPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 328 CNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGL-----GPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp EEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCS-----CEEEEEECSSSEEEEEETTTTEE
T ss_pred eeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCC-----cccEEEECCCCceEeeeeecceE
Confidence 3467788999999999999999998865431 11011111222333 342 26778999999999999999999
Q ss_pred EEEeCC
Q psy11539 481 GCWNTK 486 (530)
Q Consensus 481 ~cWnt~ 486 (530)
.+||.+
T Consensus 402 vkWni~ 407 (638)
T 3sbq_A 402 VKWNME 407 (638)
T ss_dssp EEEEHH
T ss_pred EEEecc
Confidence 999987
No 292
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=40.89 E-value=2.7e+02 Score=27.26 Aligned_cols=56 Identities=13% Similarity=0.010 Sum_probs=36.2
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.|.+||+.+++.++++.-.. ..+..+..| +.++.... .++.|.|||+.+++.-+..
T Consensus 154 ~i~iwd~~~~~~~~~~~~h~------~~v~~l~~~------~~~l~sg~-~dg~i~vwd~~~~~~~~~~ 209 (435)
T 1p22_A 154 TIKIWDKNTLECKRILTGHT------GSVLCLQYD------ERVIITGS-SDSTVRVWDVNTGEMLNTL 209 (435)
T ss_dssp CEEEEESSSCCEEEEECCCS------SCEEEEECC------SSEEEEEE-TTSCEEEEESSSCCEEEEE
T ss_pred eEEEEeCCCCeEEEEEcCCC------CcEEEEEEC------CCEEEEEc-CCCeEEEEECCCCcEEEEE
Confidence 39999999999988765322 223344443 34444443 4568999999998765433
No 293
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=40.60 E-value=2e+02 Score=25.80 Aligned_cols=76 Identities=14% Similarity=0.035 Sum_probs=42.0
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCc----EEEEEECCCcccccCccccceEEEeecCCCC
Q psy11539 240 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNT----LIRKYILPTAQVFEGSLFSNIVTEVVEDCDH 315 (530)
Q Consensus 240 vSV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~----li~~y~~P~~v~~~~S~lndIvVDv~~~c~~ 315 (530)
-.|..+....++++-+. |..+ -.|.+||+.++. +++++.-. ...+..|.+... .++
T Consensus 12 ~~v~~~~~~~~~~~l~~--~~~d----------g~i~iw~~~~~~~~~~~~~~~~~~------~~~v~~~~~~~~--~d~ 71 (351)
T 3f3f_A 12 DLVHDVVYDFYGRHVAT--CSSD----------QHIKVFKLDKDTSNWELSDSWRAH------DSSIVAIDWASP--EYG 71 (351)
T ss_dssp SCEEEEEECSSSSEEEE--EETT----------SEEEEEEECSSSCCEEEEEEEECC------SSCEEEEEECCG--GGC
T ss_pred cceeEEEEcCCCCEEEE--eeCC----------CeEEEEECCCCCCcceecceeccC------CCcEEEEEEcCC--CCC
Confidence 35777788777764433 1111 358999998763 44433321 233455555310 013
Q ss_pred eEEEEecCCCCeEEEEEccCC
Q psy11539 316 VFAYVNDVFRYGLIVYDFFKN 336 (530)
Q Consensus 316 ~~AYItDsg~~gLIVyDl~~g 336 (530)
.++..+. .++.|.+||+.++
T Consensus 72 ~~l~s~~-~dg~v~vwd~~~~ 91 (351)
T 3f3f_A 72 RIIASAS-YDKTVKLWEEDPD 91 (351)
T ss_dssp SEEEEEE-TTSCEEEEEECTT
T ss_pred CEEEEEc-CCCeEEEEecCCC
Confidence 3444433 3567999999886
No 294
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=39.85 E-value=2.4e+02 Score=26.40 Aligned_cols=63 Identities=6% Similarity=0.053 Sum_probs=36.6
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
-+|.+||+++++......+... ......+.+.. + ..+...++=+....|.+||+.++..|++.
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~h----~~~V~~v~~~p--~-~~g~~lasgs~D~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 81 RKVIIWREENGTWEKSHEHAGH----DSSVNSVCWAP--H-DYGLILACGSSDGAISLLTYTGEGQWEVK 143 (316)
T ss_dssp SCEEEECCSSSCCCEEEEECCC----SSCCCEEEECC--T-TTCSCEEEECSSSCEEEEEECSSSCEEEC
T ss_pred CEEEEEECCCCcceEEEEccCC----CCceEEEEECC--C-CCCcEEEEEcCCCCEEEEecCCCCCccee
Confidence 3488999988753333344221 23455666641 1 11333444445678999999988777643
No 295
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=38.21 E-value=4.1e+02 Score=28.58 Aligned_cols=39 Identities=5% Similarity=0.076 Sum_probs=26.4
Q ss_pred eEEEEEEEeCCCc--EEEEeCCCCCcccCccccCCCEEEEEECCCCcEEE
Q psy11539 240 ISVFRMSVDKCDR--LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIR 287 (530)
Q Consensus 240 vSV~rv~ID~cgR--LWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~ 287 (530)
..+.++.+-++|+ ++..|.+-.+ ...|.++|+++++.+.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e---------~~~i~v~dl~tg~~~~ 203 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSD---------WRTVKFVGVADGKPLA 203 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCS---------EEEEEEEETTTCCEEE
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCc---------eEEEEEEECCCCCCCC
Confidence 4666778877776 4555653211 1469999999998864
No 296
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=36.83 E-value=2.9e+02 Score=27.85 Aligned_cols=29 Identities=7% Similarity=-0.025 Sum_probs=22.4
Q ss_pred CCcceEEcCCCcEEEEccCCCeEEEEeCC
Q psy11539 458 QASASAINSNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 458 qs~G~aiD~~G~LYft~~~~~aI~cWnt~ 486 (530)
....++++.+|..+++-...+.|..||.+
T Consensus 194 ~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 194 AVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred ceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 45567777778777777778889999987
No 297
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=34.40 E-value=3.3e+02 Score=26.45 Aligned_cols=163 Identities=9% Similarity=0.015 Sum_probs=0.0
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEE----------EeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEcC
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVT----------EVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTH 343 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvV----------Dv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~h 343 (530)
.|.+||+++++......+ .....-....++|.+ | +...++=+.+..|.|||+.++..-...
T Consensus 112 ~v~lw~~~~~~~~~~~~~-~~~~gH~~~v~~v~~~p~~~~~~~~d-------~~~las~s~D~tv~~Wd~~~~~~~~~~- 182 (393)
T 4gq1_A 112 TVRLIITKNETIITQHVL-GGKSGHHNFVNDIDIADVYSADNRLA-------EQVIASVGDDCTLIIWRLTDEGPILAG- 182 (393)
T ss_dssp CEEEEEEETTEEEEEEEE-CTTTSCSSCEEEEEEEEEECTTCSEE-------EEEEEEEETTSEEEEEEEETTEEEEEE-
T ss_pred cEEEEECCCCccceeeee-cccCCCCCceEEEEEccccccccCCC-------CCEEEEEECCCeEEEEECCCCceeeee-
Q ss_pred CCCCcCCCcceeeecCeEeeecCCccceecCCCcccccccCCCcccccccccccCCccccccccCCCceEEEEeCCCCee
Q psy11539 344 PYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGYKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSMSSNRH 423 (530)
Q Consensus 344 ~sf~pdP~~~~f~I~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~r~LYf~plsS~~l 423 (530)
+.....+..++.+|++ ...+.....++.+..--+...+.
T Consensus 183 ------------------~~~~~~v~~v~~~p~~-----------------------~~~l~~~~~d~~v~~wd~~t~~~ 221 (393)
T 4gq1_A 183 ------------------YPLSSPGISVQFRPSN-----------------------PNQLIVGERNGNIRIFDWTLNLS 221 (393)
T ss_dssp ------------------EECSSCEEEEEEETTE-----------------------EEEEEEEETTSEEEEEETTCCC-
T ss_pred ------------------cCCCCCcEEEEECCCC-----------------------CceEEecCCCCEEEEEECCCCcc
Q ss_pred EEEecchhcCccccCCccccccceEEeccccCCCCCcceEEc-CCCcEEEEccCCCeEEEEeCC
Q psy11539 424 YYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFKNTQASASAIN-SNGVMFYNLVTKHSVGCWNTK 486 (530)
Q Consensus 424 Y~V~T~~Lrn~s~~~~~~~~~~~v~~lG~rG~~sqs~G~aiD-~~G~LYft~~~~~aI~cWnt~ 486 (530)
-.............................|....-..+... .+|...++....+.|.+||..
T Consensus 222 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~ 285 (393)
T 4gq1_A 222 AEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLF 285 (393)
T ss_dssp ---------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-
T ss_pred cccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECc
No 298
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=33.63 E-value=3e+02 Score=25.71 Aligned_cols=78 Identities=9% Similarity=0.006 Sum_probs=41.5
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEE
Q psy11539 241 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 320 (530)
Q Consensus 241 SV~rv~ID~cgRLWVLDtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYI 320 (530)
.|..+.++.+|++-+. |..+ -.|.+||+.+++......|... ......+++.. + .++...+
T Consensus 15 ~V~~v~~s~~g~~las--gs~D----------~~v~lwd~~~~~~~~~~~l~gH----~~~V~~v~~~~--~-~~~~~l~ 75 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLAT--CSSD----------RSVKIFDVRNGGQILIADLRGH----EGPVWQVAWAH--P-MYGNILA 75 (316)
T ss_dssp CEEEEEECGGGCEEEE--EETT----------TEEEEEEEETTEEEEEEEEECC----SSCEEEEEECC--G-GGSSCEE
T ss_pred eEEEeeEcCCCCEEEE--EeCC----------CeEEEEEecCCCcEEEEEEcCC----CccEEEEEeCC--C-CCCCEEE
Confidence 4666777777775443 3222 4589999988754322333211 12234444420 0 1122333
Q ss_pred ecCCCCeEEEEEccCCe
Q psy11539 321 NDVFRYGLIVYDFFKNT 337 (530)
Q Consensus 321 tDsg~~gLIVyDl~~g~ 337 (530)
+=+.+..|.+||+++++
T Consensus 76 s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 76 SCSYDRKVIIWREENGT 92 (316)
T ss_dssp EEETTSCEEEECCSSSC
T ss_pred EEECCCEEEEEECCCCc
Confidence 44456789999998763
No 299
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=31.69 E-value=3e+02 Score=25.07 Aligned_cols=60 Identities=20% Similarity=0.284 Sum_probs=31.9
Q ss_pred EEEEEECCCCcEEE---EEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 274 KIMVFDLKTNTLIR---KYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 274 KLvvfDL~Td~li~---~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.|.+||+.+++... .-.+.. -......+.+. .++.+++... ....|.+++...+......
T Consensus 62 ~i~vWd~~~~~~~~~~~~~~l~~----h~~~V~~~~~s----~dg~~l~s~~-~d~~i~~~~~~~~~~~~~~ 124 (340)
T 4aow_A 62 TIIMWKLTRDETNYGIPQRALRG----HSHFVSDVVIS----SDGQFALSGS-WDGTLRLWDLTTGTTTRRF 124 (340)
T ss_dssp CEEEEEECCSSSCSEEEEEEECC----CSSCEEEEEEC----TTSSEEEEEE-TTSEEEEEETTTTEEEEEE
T ss_pred eEEEEECCCCCcccceeeEEEeC----CCCCEEEEEEC----CCCCEEEEEc-ccccceEEeecccceeeee
Confidence 38888887754211 111211 12334555554 2445555443 3457888888887665543
No 300
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=27.69 E-value=5.1e+02 Score=26.51 Aligned_cols=64 Identities=8% Similarity=0.094 Sum_probs=40.9
Q ss_pred CCCEEEEEECC-CCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 271 CPPKIMVFDLK-TNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 271 c~PKLvvfDL~-Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
...+|-+|++. +++++..+.+... .. ..+++-... +++-+.++=+.+..|.+||+++|+.-+.+
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~---~v---~~l~fs~~~--g~~~~LaSgS~D~TIkIWDl~TGk~l~tL 219 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPP---EE---TILTFAEVQ--GMQEALLGTTIMNNIVIWNLKTGQLLKKM 219 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCC---SS---CEEEEEEEE--TSTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCC---ce---eeEEeeccC--CCCceEEEecCCCcEEEEECCCCcEEEEE
Confidence 35678888884 4777776665332 11 122222111 45677788778889999999999876655
No 301
>4fp5_D LT-IIB, heat-labIle enterotoxin IIB, B chain; B pentamer LT-IIB S74A mutant; 1.40A {Escherichia coli} PDB: 1qb5_D 1qcb_D 1tii_D 4fnf_D 4fo2_D
Probab=27.50 E-value=63 Score=26.88 Aligned_cols=33 Identities=21% Similarity=0.450 Sum_probs=25.1
Q ss_pred eEEEEecCC--CCeEEEEEccCCeEEEEcCCCCCcC
Q psy11539 316 VFAYVNDVF--RYGLIVYDFFKNTSYRLTHPYMYPE 349 (530)
Q Consensus 316 ~~AYItDsg--~~gLIVyDl~~g~swRv~h~sf~pd 349 (530)
-.-||+|.. ..|++|.+-..| .||+...--+||
T Consensus 23 l~kyi~din~nt~g~yvvs~tgg-vw~i~~~~dypd 57 (98)
T 4fp5_D 23 LTKYISDINNNTDGMYVVSSTGG-VWRISRAKDYPD 57 (98)
T ss_dssp EEEEEEECSTTTCEEEEEETTCC-EEEECCCSSTTH
T ss_pred hhhhhhhccCCCccEEEEecCCc-EEEecCCCCCCh
Confidence 456999986 579999997755 999986654554
No 302
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=26.90 E-value=4.5e+02 Score=25.56 Aligned_cols=55 Identities=13% Similarity=0.077 Sum_probs=34.6
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCe
Q psy11539 274 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT 337 (530)
Q Consensus 274 KLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~ 337 (530)
.|.+||+.+++.++++.-. .+....+.+... .++.++... +....|.+||+.+++
T Consensus 184 ~i~vwd~~~~~~~~~~~~h------~~~v~~l~~~~~--~~~~~l~s~-s~d~~i~vwd~~~~~ 238 (464)
T 3v7d_B 184 TVRVWDIKKGCCTHVFEGH------NSTVRCLDIVEY--KNIKYIVTG-SRDNTLHVWKLPKES 238 (464)
T ss_dssp CEEEEETTTTEEEEEECCC------SSCEEEEEEEES--SSCEEEEEE-ETTSCEEEEECCCCC
T ss_pred CEEEEECCCCcEEEEECCC------CCccEEEEEecC--CCCCEEEEE-cCCCcEEEeeCCCCc
Confidence 4999999999988766532 233455555421 123344433 455689999998874
No 303
>1qb5_D Protein (heat labIle enterotoxin type IIB B- pentamer); 1.90A {Escherichia coli} SCOP: b.40.2.1 PDB: 1qcb_D 1tii_D
Probab=26.76 E-value=64 Score=26.85 Aligned_cols=34 Identities=21% Similarity=0.441 Sum_probs=25.6
Q ss_pred CeEEEEecCC--CCeEEEEEccCCeEEEEcCCCCCcC
Q psy11539 315 HVFAYVNDVF--RYGLIVYDFFKNTSYRLTHPYMYPE 349 (530)
Q Consensus 315 ~~~AYItDsg--~~gLIVyDl~~g~swRv~h~sf~pd 349 (530)
+-.-||+|.. ..|++|.+-..| .||+...--+||
T Consensus 22 ~l~kyi~din~nt~g~yvvs~tgg-vw~i~~~~dypd 57 (99)
T 1qb5_D 22 ELTKYISDINNNTDGMYVVSSTGG-VWRISRAKDYPD 57 (99)
T ss_dssp CEEEEEEECSTTTCEEEEEETTSC-EEEECCCSSTTH
T ss_pred hhhhhhhhccCCCccEEEEecCCc-EEEecCCCCCCh
Confidence 3467999986 579999997755 999986654554
No 304
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=26.04 E-value=79 Score=26.36 Aligned_cols=29 Identities=10% Similarity=0.139 Sum_probs=23.5
Q ss_pred CCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 314 DHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 314 ~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
.++.||+++....+-+...+..+..+++.
T Consensus 41 ~~G~vyl~gl~~~g~L~V~Wg~~~~C~i~ 69 (94)
T 3l48_A 41 DEGLAWLSGVTPGETLSVNWDGKIQCQVN 69 (94)
T ss_dssp GGGEEEESSCCTTCEEEEECSSSEEEEEE
T ss_pred CCCEEEEECCCCCCEEEEEECCCCeEEEE
Confidence 48999999988777676677667889987
No 305
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=25.95 E-value=1.6e+02 Score=28.91 Aligned_cols=22 Identities=27% Similarity=0.374 Sum_probs=15.3
Q ss_pred CCCcEEEEccCCCeEEEEeCCCCc
Q psy11539 466 SNGVMFYNLVTKHSVGCWNTKTKV 489 (530)
Q Consensus 466 ~~G~LYft~~~~~aI~cWnt~~~~ 489 (530)
.++.|-+++ .+.|..||..++.
T Consensus 115 ~~n~lAvgl--d~tV~lWd~~tg~ 136 (420)
T 4gga_A 115 SGNVLAVAL--DNSVYLWSASSGD 136 (420)
T ss_dssp TTSEEEEEE--TTEEEEEETTTCC
T ss_pred CCCEEEEEe--CCEEEEEECCCCC
Confidence 455666664 5789999998443
No 306
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=25.21 E-value=21 Score=35.60 Aligned_cols=55 Identities=18% Similarity=0.195 Sum_probs=25.7
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeE-EEEc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS-YRLT 342 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~s-wRv~ 342 (530)
-.|++||++||+++.++..+... .. .+ .++.+|+... .+.|+.||.++|+. |++.
T Consensus 102 g~v~a~D~~tG~~~w~~~~~~~~----------~~--~p--~~~~v~~~~~-dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 102 DIWYVIDLLTGEKQQTLSSAFAD----------SL--SP--STSLLYLGRT-EYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp EEEEEECCC------------------------------------EEEEEE-EEEEECCCSSSSSCCCEEE
T ss_pred CEEEEEECCCCcEEEEecCCCcc----------cc--cc--cCCEEEEEec-CCEEEEEECCCCCEEEeEe
Confidence 35999999999998877764311 00 00 3567888642 35799999998875 8765
No 307
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=22.14 E-value=3.4e+02 Score=29.74 Aligned_cols=56 Identities=25% Similarity=0.367 Sum_probs=40.3
Q ss_pred CCceEEEEEEEeCCCcEEEE-eCCCCCcccCccccCCCEEEEEECCCCcEEEEEECCC
Q psy11539 237 NSLISVFRMSVDKCDRLWIM-DTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPT 293 (530)
Q Consensus 237 ~~LvSV~rv~ID~cgRLWVL-DtG~~~~~~~~~~~c~PKLvvfDL~Td~li~~y~~P~ 293 (530)
+.|.++=.|.+|+.|+|||. |.+.... +.....+.-.+++++..++++.+-..-|.
T Consensus 473 ~~f~~PDNL~fd~~G~LwI~eDg~~~~~-~~~~~~gnn~~~~~~~~~g~~~rf~~~P~ 529 (592)
T 3zwu_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSNA-GDFAGMGNNQMLCADPATGEIRRFMVGPI 529 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCCS-GGGTTTCSCEEEEECTTTCCEEEEEECCT
T ss_pred CCccCCcceEECCCCCEEEEecCCCccc-ccccccccceEEEEeCCCCeEEEEEeCCC
Confidence 56899999999999999999 7664321 11122345679999999998876555543
No 308
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=21.59 E-value=2e+02 Score=28.12 Aligned_cols=74 Identities=5% Similarity=-0.124 Sum_probs=44.2
Q ss_pred ceEEeccccCCCCCcceEEcCCCcEEEEccCCCeEEEEeCCCCc---cccCceeEEeecCCceeecceeEEecCCcEEEE
Q psy11539 446 YFHYLGSRFKNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKV---YLPQTQDIVQTSRDILNFREEGEEEEEKENTCT 522 (530)
Q Consensus 446 ~v~~lG~rG~~sqs~G~aiD~~G~LYft~~~~~aI~cWnt~~~~---~~~~n~~lV~~d~~~L~~Pd~l~Id~dG~lYv~ 522 (530)
..+.+|+.| ..+-.-++++.+|.||.. ....++..++.+.. +-. ....|..- ....=..+.+|.+|+||+.
T Consensus 31 ~a~~iG~~g-w~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~-s~t~IG~~--Gw~~F~a~~fD~~G~LYav 104 (236)
T 1tl2_A 31 RATLIGKGG-WSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMG-RAKKIGNG--GWNQFQFLFFDPNGYLYAV 104 (236)
T ss_dssp HSEEEESSS-CTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHH-HCEEEECS--CGGGCSEEEECTTSCEEEE
T ss_pred hccccCccc-cccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccc-cccEeccc--ccccceEEEECCCCCEEEe
Confidence 345667644 235668999999999999 67789988875210 000 01112110 0001245788999999986
Q ss_pred Eeece
Q psy11539 523 FLVNK 527 (530)
Q Consensus 523 ~~snr 527 (530)
+|-
T Consensus 105 --~dG 107 (236)
T 1tl2_A 105 --SKD 107 (236)
T ss_dssp --ETT
T ss_pred --CCC
Confidence 553
No 309
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=21.41 E-value=5.7e+02 Score=24.82 Aligned_cols=57 Identities=12% Similarity=0.105 Sum_probs=36.7
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCccccceEEEeecCCCCeEEEEecCCCCeEEEEEccCCeEEEEc
Q psy11539 273 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 342 (530)
Q Consensus 273 PKLvvfDL~Td~li~~y~~P~~v~~~~S~lndIvVDv~~~c~~~~AYItDsg~~gLIVyDl~~g~swRv~ 342 (530)
-.|.+||+.+++.++++.... .....+.+| +.+++.+. ..+.|.+||+.+++.-+..
T Consensus 259 g~i~iwd~~~~~~~~~~~~~~------~~v~~~~~~------~~~l~~~~-~d~~i~i~d~~~~~~~~~~ 315 (445)
T 2ovr_B 259 FMVKVWDPETETCLHTLQGHT------NRVYSLQFD------GIHVVSGS-LDTSIRVWDVETGNCIHTL 315 (445)
T ss_dssp SCEEEEEGGGTEEEEEECCCS------SCEEEEEEC------SSEEEEEE-TTSCEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCcEeEEecCCC------CceEEEEEC------CCEEEEEe-CCCeEEEEECCCCCEEEEE
Confidence 458899999988887765322 233445553 44555544 3567999999988765433
Done!