BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11542
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O97432|MRJP5_APIME Major royal jelly protein 5 OS=Apis mellifera GN=MRJP5 PE=2 SV=1
Length = 598
Score = 103 bits (257), Expect = 7e-22, Method: Composition-based stats.
Identities = 52/158 (32%), Positives = 90/158 (56%), Gaps = 23/158 (14%)
Query: 24 MKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVDVFDPTTYGPNNGYAGGPNKE 83
M ++EW +D+ + S R A++ G+YD +K DVD + T
Sbjct: 35 MNVIHEWKYLDYDFGSDERRQAAMQSGEYDHTKNYPFDVDQWRGMT-------------- 80
Query: 84 KRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWSTHNEKDCDGLISVYRVQIDE 143
FVT P+++ G+P +L+ +S K N G LL+P+P+WS N KDC G++S Y++ ID+
Sbjct: 81 ---FVTVPRYK-GVPSSLNVISEKIGN-GGRLLQPYPDWSWANYKDCSGIVSAYKIAIDK 135
Query: 144 CGKLWVLDTGKLNTFTGSPKKLCNPQIVVYDLTKGDKI 181
+LW+LD+G +N + + +C+P++ V+DL ++
Sbjct: 136 FDRLWILDSGIIN----NTQPMCSPKLHVFDLNTSHQL 169
>sp|P09957|YELL_DROME Protein yellow OS=Drosophila melanogaster GN=y PE=1 SV=1
Length = 541
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 25/162 (15%)
Query: 24 MKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVDVFDPTTYGPNNGYAGGPNKE 83
++ Y WS +DF +P++R++D A+ G Y P + V+ F
Sbjct: 25 LQERYSWSQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFG----------------- 67
Query: 84 KRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWSTHNEKDC-DGLISVYRVQID 142
R+FVT P+++ GIP TL+ ++ R+ GS L P+P+W ++ DC + + + YR+++D
Sbjct: 68 NRLFVTVPRWRDGIPATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVD 127
Query: 143 ECGKLWVLDTGKL---NTFTGSPKKLCNPQIVVYDLTKGDKI 181
ECG+LWVLDTG + NT T C + V+DLT +I
Sbjct: 128 ECGRLWVLDTGTVGIGNTTTNP----CPYAVNVFDLTTDTRI 165
>sp|P62407|YELL_DROSI Protein yellow OS=Drosophila simulans GN=y PE=3 SV=1
Length = 541
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 25/162 (15%)
Query: 24 MKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVDVFDPTTYGPNNGYAGGPNKE 83
++ Y W+ +DF +P++R++D A+ G Y P + V+ F
Sbjct: 25 LQERYSWNQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFG----------------- 67
Query: 84 KRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWSTHNEKDC-DGLISVYRVQID 142
R+FVT P+++ GIP TL+ ++ R+ GS L P+P+W ++ DC + + + YR+++D
Sbjct: 68 NRLFVTVPRWRDGIPATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVD 127
Query: 143 ECGKLWVLDTGKL---NTFTGSPKKLCNPQIVVYDLTKGDKI 181
ECG+LWVLDTG + NT T C + V+DLT +I
Sbjct: 128 ECGRLWVLDTGTVGIGNTTTNP----CPYAVNVFDLTTDTRI 165
>sp|P62408|YELL_DROMA Protein yellow OS=Drosophila mauritiana GN=y PE=3 SV=1
Length = 541
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 25/162 (15%)
Query: 24 MKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVDVFDPTTYGPNNGYAGGPNKE 83
++ Y W+ +DF +P++R++D A+ G Y P + V+ F
Sbjct: 25 LQERYSWNQLDFAFPNTRLKDQALASGDYIPQNALPVGVEHFG----------------- 67
Query: 84 KRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWSTHNEKDC-DGLISVYRVQID 142
R+FVT P+++ GIP TL+ ++ R+ GS L P+P+W ++ DC + + + YR+++D
Sbjct: 68 NRLFVTVPRWRDGIPATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVD 127
Query: 143 ECGKLWVLDTGKL---NTFTGSPKKLCNPQIVVYDLTKGDKI 181
ECG+LWVLDTG + NT T C + V+DLT +I
Sbjct: 128 ECGRLWVLDTGTVGIGNTTTNP----CPYAVNVFDLTTDTRI 165
>sp|Q9BI23|YELL_DROER Protein yellow OS=Drosophila erecta GN=y PE=3 SV=1
Length = 541
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 89/162 (54%), Gaps = 25/162 (15%)
Query: 24 MKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVDVFDPTTYGPNNGYAGGPNKE 83
++ Y W+ +DF +P++R+++ A+ G Y P + V+ F
Sbjct: 25 LQERYSWNQLDFAFPNARLKEQALASGDYIPQNALPVGVEHFG----------------- 67
Query: 84 KRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWSTHNEKDC-DGLISVYRVQID 142
R+FVT P+++ GIP TL+ ++ R+ GS L P+P+W ++ DC + + + YR+++D
Sbjct: 68 NRLFVTVPRWRDGIPATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVD 127
Query: 143 ECGKLWVLDTGKL---NTFTGSPKKLCNPQIVVYDLTKGDKI 181
ECG+LWVLDTG + NT T C + VYDLT +I
Sbjct: 128 ECGRLWVLDTGTVGIGNTTTNP----CPYAVNVYDLTTDTRI 165
>sp|Q9GP81|YELL_DROGU Protein yellow OS=Drosophila guanche GN=y PE=3 SV=1
Length = 568
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 95/181 (52%), Gaps = 26/181 (14%)
Query: 6 LLTLLLHSHLIAIIQGG-GMKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVDV 64
L LL+ ++ Q ++ Y W+ +DF +PS+R+++ A+ G Y P+ + V+
Sbjct: 13 LSLLLIAVAMVCPSQAAYKLQERYSWNQLDFAFPSARLKEQALASGDYIPTNALPVGVEH 72
Query: 65 FDPTTYGPNNGYAGGPNKEKRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWST 124
F R+FVT P+++ GIP TL+ ++ + GS L P+P+W
Sbjct: 73 FG-----------------NRLFVTVPRWRDGIPATLTYINMDHSVTGSPELIPYPDWRA 115
Query: 125 HNEKDC-DGLISVYRVQIDECGKLWVLDTGKL---NTFTGSPKKLCNPQIVVYDLTKGDK 180
+ DC + + + YR+++DECG+LWVLDTG + NT T C I ++DLT +
Sbjct: 116 NTAGDCSNSITTAYRIKVDECGRLWVLDTGTVGIGNTTTNP----CPYAINIFDLTTNTR 171
Query: 181 I 181
I
Sbjct: 172 I 172
>sp|Q9GP71|YELL_DROMD Protein yellow OS=Drosophila madeirensis GN=y PE=3 SV=1
Length = 568
Score = 98.2 bits (243), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 96/182 (52%), Gaps = 26/182 (14%)
Query: 5 CLLTLLLHSHLIAIIQGG-GMKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVD 63
L LL+ +++ Q ++ Y W+ +DF +P++R+++ A+ G Y P+ + V+
Sbjct: 12 ALSLLLIAVAMVSPSQAAYKLQERYSWNQLDFAFPNARLKEQALASGDYIPTNALPVGVE 71
Query: 64 VFDPTTYGPNNGYAGGPNKEKRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWS 123
F R+FVT P+++ GIP TL+ ++ + GS L P+P+W
Sbjct: 72 HFG-----------------NRLFVTVPRWRDGIPATLTYINMDHSVTGSPELIPYPDWR 114
Query: 124 THNEKDC-DGLISVYRVQIDECGKLWVLDTGKL---NTFTGSPKKLCNPQIVVYDLTKGD 179
+ DC + + + YR+++DECG+LWVLDTG + NT T C I ++DLT
Sbjct: 115 ANTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGNTTTNP----CPYAINIFDLTTNT 170
Query: 180 KI 181
+I
Sbjct: 171 RI 172
>sp|O02437|YELL_DROSU Protein yellow OS=Drosophila subobscura GN=y PE=3 SV=1
Length = 568
Score = 97.4 bits (241), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 26/182 (14%)
Query: 5 CLLTLLLHSHLIAIIQGG-GMKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVD 63
L LL+ +++ Q ++ Y W+ +DF +PS+R+++ A+ G Y P+ + V+
Sbjct: 12 ALSLLLIAVAMVSPSQAAYKLQERYSWNQLDFAFPSARLKEQALASGDYIPTNALPVGVE 71
Query: 64 VFDPTTYGPNNGYAGGPNKEKRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWS 123
F R+FVT P+++ GIP TL+ ++ + GS L P+P+W
Sbjct: 72 HFG-----------------NRLFVTVPRWRDGIPATLTYINMDHSVTGSPELIPYPDWR 114
Query: 124 THNEKDC-DGLISVYRVQIDECGKLWVLDTGKL---NTFTGSPKKLCNPQIVVYDLTKGD 179
+ DC + + + YR+++DECG+LWVLDTG + NT T C I ++DL
Sbjct: 115 ANTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGNTTTNP----CPYAINIFDLATDT 170
Query: 180 KI 181
+I
Sbjct: 171 RI 172
>sp|Q9BI18|YELL_DROPS Protein yellow OS=Drosophila pseudoobscura pseudoobscura GN=y PE=3
SV=2
Length = 560
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 94/182 (51%), Gaps = 26/182 (14%)
Query: 5 CLLTLLLHSHLIAIIQGG-GMKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVD 63
L LL+ ++ Q ++ Y W+ +DF +P++R+++ A+ G Y P + V+
Sbjct: 14 ALSLLLVAVTMVTPTQAAYKLQERYSWNQLDFAFPNARLKEQAMASGDYIPQNALPVGVE 73
Query: 64 VFDPTTYGPNNGYAGGPNKEKRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWS 123
F R+FVT P+++ GIP TL+ ++ + GS L P+P+W
Sbjct: 74 HFG-----------------NRLFVTVPRWRDGIPATLTYINMDHSVTGSPELIPYPDWR 116
Query: 124 THNEKDC-DGLISVYRVQIDECGKLWVLDTGKL---NTFTGSPKKLCNPQIVVYDLTKGD 179
+ DC + + + YR+++DECG+LWVLDTG + NT T C + V+DLT
Sbjct: 117 ANTAGDCANSITTAYRIKVDECGRLWVLDTGTVGIGNTTTNP----CPYAVNVFDLTTNT 172
Query: 180 KI 181
+I
Sbjct: 173 RI 174
>sp|Q9BI17|YELL_DROYA Protein yellow OS=Drosophila yakuba GN=y PE=3 SV=1
Length = 541
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 89/162 (54%), Gaps = 25/162 (15%)
Query: 24 MKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVDVFDPTTYGPNNGYAGGPNKE 83
++ Y W+ +DF +P++R+++ A+ G Y P + V+ F
Sbjct: 25 LQERYSWNQLDFAFPNARLKEQALASGDYIPQNGLPVGVEHFG----------------- 67
Query: 84 KRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWSTHNEKDC-DGLISVYRVQID 142
R+FVT P+++ GIP TL+ ++ R+ GS L P+P+W ++ DC + + + YR+++D
Sbjct: 68 NRLFVTVPRWRDGIPATLTYINMDRSLTGSPELIPYPDWRSNTAGDCANSITTAYRIKVD 127
Query: 143 ECGKLWVLDTGKL---NTFTGSPKKLCNPQIVVYDLTKGDKI 181
ECG+LWVLDTG + NT T C + V+DLT +I
Sbjct: 128 ECGRLWVLDTGTVGIGNTTTNP----CPYAVNVFDLTTDTRI 165
>sp|Q17060|MRJP3_APIME Major royal jelly protein 3 OS=Apis mellifera GN=MRJP3 PE=1 SV=1
Length = 544
Score = 94.7 bits (234), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 92/163 (56%), Gaps = 24/163 (14%)
Query: 24 MKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVDVFDPTTYGPNNGYAGGPNKE 83
MK +YEW +DF + S RD AI+ G++D +K DVD + T
Sbjct: 37 MKVIYEWKHIDFDFGSDERRDAAIKSGEFDHTKNYPFDVDRWRDKT-------------- 82
Query: 84 KRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWSTHNEKDCDGLISVYRVQIDE 143
FVT + G+P +L+ +++K+ G LL P+P+WS +DC G++S +++ +D+
Sbjct: 83 ---FVTIER-NNGVPSSLNVVTNKKG-KGGPLLRPYPDWSFAKYEDCSGIVSAFKIAVDK 137
Query: 144 CGKLWVLDTGKLNTFTGSPKKLCNPQIVVYDLTKGDKIVPKTK 186
+LWVLD+G +N + + +C+P+++ +DL K K+V + +
Sbjct: 138 FDRLWVLDSGLVN----NNQPMCSPKLLTFDL-KTSKLVKQVE 175
>sp|O18330|MRJP1_APIME Major royal jelly protein 1 OS=Apis mellifera GN=MRJP1 PE=1 SV=1
Length = 432
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 83/150 (55%), Gaps = 23/150 (15%)
Query: 27 LYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVDVFDPTTYGPNNGYAGGPNKEKRI 86
L+EW D+ + S R +AI G+YD D+D + +I
Sbjct: 34 LHEWKFFDYDFGSDERRQDAILSGEYDYKNNYPSDIDQW-----------------HDKI 76
Query: 87 FVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWSTHNEKDCDGLISVYRVQIDECGK 146
FVT ++ G+P +L+ +S K+ DG LL+P+P+WS DC G++S ++ ID+C +
Sbjct: 77 FVTMLRYN-GVPSSLNVIS-KKVGDGGPLLQPYPDWSFAKYDDCSGIVSASKLAIDKCDR 134
Query: 147 LWVLDTGKLNTFTGSPKKLCNPQIVVYDLT 176
LWVLD+G +N + + +C+P+++ +DLT
Sbjct: 135 LWVLDSGLVN----NTQPMCSPKLLTFDLT 160
>sp|Q17061|MRJP4_APIME Major royal jelly protein 4 OS=Apis mellifera GN=MRJP4 PE=1 SV=1
Length = 464
Score = 86.7 bits (213), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 84/153 (54%), Gaps = 23/153 (15%)
Query: 24 MKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVDVFDPTTYGPNNGYAGGPNKE 83
+ +++W +D+ + + R AI+ G+YD +K LDVD +
Sbjct: 36 LNVIHKWKYLDYDFDNDERRQAAIQSGEYDRTKNYPLDVDQW-----------------H 78
Query: 84 KRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWSTHNEKDCDGLISVYRVQIDE 143
+ F+ ++ G+P +L+ +S K N G LL+P+P+WS +DC G++S +++ IDE
Sbjct: 79 NKTFLAVIRYN-GVPSSLNVVSDKTGN-GGRLLQPYPDWSFAKYEDCSGIVSAHKIAIDE 136
Query: 144 CGKLWVLDTGKLNTFTGSPKKLCNPQIVVYDLT 176
+LWVLD+G +N + + +C+P++ +DL
Sbjct: 137 YERLWVLDSGLVN----NTQPMCSPKLFAFDLN 165
>sp|O77061|MRJP2_APIME Major royal jelly protein 2 OS=Apis mellifera GN=MRJP2 PE=1 SV=1
Length = 452
Score = 83.6 bits (205), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 81/158 (51%), Gaps = 23/158 (14%)
Query: 24 MKTLYEWSGVDFTWPSSRIRDNAIRDGKYDPSKVAILDVDVFDPTTYGPNNGYAGGPNKE 83
+ ++EW D+ + S R AI+ G+YD +K DVD + T
Sbjct: 32 LNVIHEWKYFDYDFGSEERRQAAIQSGEYDHTKNYPFDVDQWRDKT-------------- 77
Query: 84 KRIFVTTPKFQPGIPVTLSTLSSKRANDGSHLLEPFPNWSTHNEKDCDGLISVYRVQIDE 143
FVT ++ G+P TL+ +S K G LL+P+P+WS KDC ++S +++ ID+
Sbjct: 78 ---FVTILRYD-GVPSTLNVISGKTGK-GGRLLKPYPDWSFAEFKDCSKIVSAFKIAIDK 132
Query: 144 CGKLWVLDTGKLNTFTGSPKKLCNPQIVVYDLTKGDKI 181
+LWVLD+G +N +C P++ V+DL + +
Sbjct: 133 FDRLWVLDSGLVNRTV----PVCAPKLHVFDLKTSNHL 166
>sp|Q7T308|RN168_DANRE E3 ubiquitin-protein ligase RNF168 OS=Danio rerio GN=rnf168 PE=2
SV=1
Length = 474
Score = 31.2 bits (69), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 68 TTYGPNNGYAGGPNKEKRIFVTTPKFQPGI--PVTLSTLSS--KRANDGSHLLEPFPNW 122
TT G G EKR+ TTP +PG+ PV+ + +SS K+ + L E FPN
Sbjct: 414 TTAKNCTGRRGEEKTEKRLSGTTPGKRPGVKTPVSSTAVSSTVKKGTKQTTLTEMFPNM 472
>sp|B2FHY5|GLMU_STRMK Bifunctional protein GlmU OS=Stenotrophomonas maltophilia (strain
K279a) GN=glmU PE=3 SV=1
Length = 455
Score = 30.8 bits (68), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 18/30 (60%)
Query: 42 IRDNAIRDGKYDPSKVAILDVDVFDPTTYG 71
IR +RD P ++A+L DV DPT YG
Sbjct: 109 IRAQTLRDLLAQPGRLAVLVADVDDPTGYG 138
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.139 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,114,699
Number of Sequences: 539616
Number of extensions: 3657932
Number of successful extensions: 6016
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5967
Number of HSP's gapped (non-prelim): 28
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)